Query 006696
Match_columns 635
No_of_seqs 505 out of 5073
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 06:31:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006696.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006696hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 3.8E-52 1.3E-56 428.3 21.2 252 343-615 46-321 (329)
2 3omv_A RAF proto-oncogene seri 100.0 8.8E-52 3E-56 419.8 22.2 251 343-616 41-303 (307)
3 4gt4_A Tyrosine-protein kinase 100.0 3.4E-52 1.2E-56 424.6 18.9 249 343-612 31-305 (308)
4 4asz_A BDNF/NT-3 growth factor 100.0 1.6E-52 5.5E-57 425.2 14.8 252 343-615 18-291 (299)
5 3hmm_A TGF-beta receptor type- 100.0 1.7E-51 5.7E-56 420.3 14.2 261 343-615 8-299 (303)
6 4fih_A Serine/threonine-protei 100.0 8.4E-51 2.9E-55 417.8 17.9 240 343-607 79-324 (346)
7 4ase_A Vascular endothelial gr 100.0 1.1E-50 3.8E-55 420.7 17.2 257 342-617 68-351 (353)
8 4g3f_A NF-kappa-beta-inducing 100.0 1.3E-50 4.4E-55 415.2 17.4 245 343-615 63-318 (336)
9 3fpq_A Serine/threonine-protei 100.0 2.6E-50 9E-55 406.0 18.1 241 344-607 32-283 (290)
10 4b9d_A Serine/threonine-protei 100.0 3.6E-50 1.2E-54 413.7 17.3 241 343-607 29-277 (350)
11 4fie_A Serine/threonine-protei 100.0 1.8E-49 6.1E-54 417.8 18.2 240 343-607 156-401 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.2E-49 1.1E-53 400.0 14.0 238 343-607 37-285 (311)
13 3hyh_A Carbon catabolite-derep 100.0 1.5E-48 5.1E-53 389.8 18.2 237 343-607 18-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1E-48 3.5E-53 396.3 11.7 237 343-606 29-281 (304)
15 4g31_A Eukaryotic translation 100.0 3.3E-47 1.1E-51 386.8 16.9 240 343-607 10-280 (299)
16 4f9c_A Cell division cycle 7-r 100.0 9.1E-45 3.1E-49 378.8 20.2 187 343-541 26-250 (361)
17 4b99_A Mitogen-activated prote 100.0 3.2E-44 1.1E-48 378.7 24.2 249 343-607 59-345 (398)
18 2qkw_B Protein kinase; three-h 100.0 8.1E-43 2.8E-47 360.5 25.3 267 343-615 44-317 (321)
19 3v5w_A G-protein coupled recep 100.0 6.3E-44 2.2E-48 392.0 16.5 241 343-607 194-450 (689)
20 3uto_A Twitchin; kinase, muscl 100.0 2.5E-43 8.7E-48 389.8 17.1 243 343-607 162-411 (573)
21 3soc_A Activin receptor type-2 100.0 7E-43 2.4E-47 361.1 16.3 257 343-615 29-320 (322)
22 3uim_A Brassinosteroid insensi 100.0 1.5E-42 5E-47 359.3 17.1 277 332-611 19-309 (326)
23 3p86_A Serine/threonine-protei 100.0 4E-42 1.4E-46 353.2 16.5 254 343-617 42-302 (309)
24 3s95_A LIMK-1, LIM domain kina 100.0 1.3E-41 4.3E-46 349.7 19.4 249 343-617 15-286 (310)
25 4hcu_A Tyrosine-protein kinase 100.0 2.6E-41 8.7E-46 340.1 20.7 247 343-614 15-267 (269)
26 2psq_A Fibroblast growth facto 100.0 1.4E-41 4.8E-46 358.0 19.5 255 343-617 86-368 (370)
27 3fxz_A Serine/threonine-protei 100.0 2.1E-41 7.2E-46 345.9 18.8 240 343-607 25-270 (297)
28 3kul_A Ephrin type-A receptor 100.0 2.6E-41 9E-46 349.7 18.6 253 343-620 54-320 (325)
29 3gen_A Tyrosine-protein kinase 100.0 6.9E-41 2.4E-45 339.5 20.4 248 343-615 29-282 (283)
30 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.3E-41 1.5E-45 338.1 18.4 248 343-615 13-266 (268)
31 2nru_A Interleukin-1 receptor- 100.0 4E-40 1.4E-44 338.0 25.0 270 332-613 14-306 (307)
32 2izr_A Casein kinase I isoform 100.0 1.8E-40 6.1E-45 344.3 22.1 253 343-615 14-283 (330)
33 2c30_A Serine/threonine-protei 100.0 1.9E-40 6.4E-45 342.7 21.9 239 344-607 51-295 (321)
34 3q4u_A Activin receptor type-1 100.0 5.6E-41 1.9E-45 343.1 17.4 251 343-611 13-300 (301)
35 3tt0_A Basic fibroblast growth 100.0 2.3E-40 7.9E-45 350.5 21.7 261 343-623 74-362 (382)
36 3fe3_A MAP/microtubule affinit 100.0 1.7E-40 6E-45 343.5 20.3 238 343-607 20-265 (328)
37 1qcf_A Haematopoetic cell kina 100.0 7.8E-41 2.7E-45 362.2 18.3 247 343-614 193-445 (454)
38 1k9a_A Carboxyl-terminal SRC k 100.0 2E-40 6.8E-45 358.4 20.7 247 343-615 198-447 (450)
39 1csn_A Casein kinase-1; phosph 100.0 4.4E-40 1.5E-44 336.0 21.6 255 343-616 15-286 (298)
40 3cbl_A C-FES, proto-oncogene t 100.0 2.2E-41 7.7E-46 357.6 12.0 247 343-614 119-375 (377)
41 1opk_A P150, C-ABL, proto-onco 100.0 1E-40 3.5E-45 364.8 17.0 247 343-613 225-478 (495)
42 3mdy_A Bone morphogenetic prot 100.0 4.1E-40 1.4E-44 342.3 20.7 256 343-616 42-334 (337)
43 2qol_A Ephrin receptor; recept 100.0 1.5E-40 5.2E-45 350.4 17.6 247 343-614 50-310 (373)
44 3zgw_A Maternal embryonic leuc 100.0 2.4E-40 8.3E-45 344.6 18.7 240 343-609 15-263 (347)
45 4dc2_A Protein kinase C IOTA t 100.0 6.1E-40 2.1E-44 346.9 22.0 245 343-606 57-318 (396)
46 3niz_A Rhodanese family protei 100.0 1.6E-40 5.6E-45 341.6 17.0 253 343-607 26-301 (311)
47 3t9t_A Tyrosine-protein kinase 100.0 5.4E-40 1.8E-44 329.7 19.9 247 343-614 13-265 (267)
48 2yab_A Death-associated protei 100.0 9.7E-40 3.3E-44 342.1 22.4 241 343-606 17-272 (361)
49 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.4E-40 4.8E-45 359.8 16.4 248 343-615 189-442 (452)
50 3vhe_A Vascular endothelial gr 100.0 7.3E-41 2.5E-45 351.3 13.7 254 343-615 27-357 (359)
51 3dtc_A Mitogen-activated prote 100.0 1.6E-40 5.5E-45 334.4 15.5 245 343-611 12-271 (271)
52 4eqm_A Protein kinase; transfe 100.0 1.4E-39 4.8E-44 331.9 22.6 254 343-618 16-280 (294)
53 3ugc_A Tyrosine-protein kinase 100.0 1.6E-40 5.4E-45 339.0 15.4 255 343-615 15-293 (295)
54 1o6l_A RAC-beta serine/threoni 100.0 2.1E-39 7.2E-44 336.4 24.0 238 343-607 10-261 (337)
55 1tki_A Titin; serine kinase, m 100.0 3.5E-40 1.2E-44 340.5 18.1 244 343-608 10-259 (321)
56 3lb7_A RAF proto-oncogene seri 100.0 1.4E-39 4.8E-44 333.9 22.4 253 342-617 40-304 (307)
57 3kn6_A Ribosomal protein S6 ki 100.0 3.6E-40 1.2E-44 341.1 18.1 247 343-607 16-271 (325)
58 4euu_A Serine/threonine-protei 100.0 2E-39 6.7E-44 334.8 23.4 264 343-614 14-310 (319)
59 3tki_A Serine/threonine-protei 100.0 3.3E-40 1.1E-44 341.1 17.1 241 343-607 12-262 (323)
60 3poz_A Epidermal growth factor 100.0 2.8E-40 9.6E-45 342.4 16.6 246 343-614 20-279 (327)
61 2y0a_A Death-associated protei 100.0 5.6E-40 1.9E-44 339.9 18.5 243 342-607 15-272 (326)
62 1nxk_A MAP kinase-activated pr 100.0 1.1E-39 3.9E-44 346.9 21.3 246 344-609 68-324 (400)
63 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.4E-40 1.5E-44 341.3 17.2 238 343-608 14-260 (336)
64 3kex_A Receptor tyrosine-prote 100.0 1.3E-40 4.3E-45 344.7 12.9 246 343-614 18-277 (325)
65 3uc3_A Serine/threonine-protei 100.0 8E-40 2.7E-44 343.5 19.0 245 343-608 25-276 (361)
66 3txo_A PKC-L, NPKC-ETA, protei 100.0 4E-40 1.4E-44 344.1 16.5 238 343-606 28-280 (353)
67 2zv2_A Calcium/calmodulin-depe 100.0 7.8E-40 2.7E-44 334.4 18.1 239 343-607 18-293 (298)
68 3l9p_A Anaplastic lymphoma kin 100.0 2.7E-40 9.3E-45 347.9 15.1 252 343-615 76-347 (367)
69 3op5_A Serine/threonine-protei 100.0 8.5E-40 2.9E-44 344.0 18.9 255 343-616 40-332 (364)
70 3a8x_A Protein kinase C IOTA t 100.0 1.8E-39 6.1E-44 338.4 20.8 246 343-607 14-276 (345)
71 1luf_A Muscle-specific tyrosin 100.0 5.9E-40 2E-44 342.1 16.3 252 343-615 52-337 (343)
72 2eva_A TAK1 kinase - TAB1 chim 100.0 2.8E-39 9.6E-44 331.8 21.0 253 343-617 13-267 (307)
73 4f0f_A Serine/threonine-protei 100.0 2E-39 6.7E-44 329.4 19.6 247 343-611 24-287 (287)
74 3qd2_B Eukaryotic translation 100.0 1.8E-39 6.2E-44 336.5 19.6 240 343-607 11-326 (332)
75 1xjd_A Protein kinase C, theta 100.0 3.1E-40 1.1E-44 343.7 13.8 238 343-606 22-269 (345)
76 2bdw_A Hypothetical protein K1 100.0 3.8E-39 1.3E-43 338.3 22.1 242 343-607 34-285 (362)
77 1rjb_A FL cytokine receptor; k 100.0 5.1E-40 1.8E-44 342.8 15.3 258 342-618 49-339 (344)
78 1t46_A HOMO sapiens V-KIT hard 100.0 6.9E-40 2.3E-44 337.0 15.9 255 343-616 28-310 (313)
79 3c0i_A Peripheral plasma membr 100.0 1.6E-39 5.5E-44 340.0 19.0 246 342-607 28-287 (351)
80 2h8h_A Proto-oncogene tyrosine 100.0 4.3E-40 1.5E-44 363.1 15.3 248 343-615 272-525 (535)
81 3llt_A Serine/threonine kinase 100.0 3.1E-40 1.1E-44 346.7 13.6 193 343-542 40-263 (360)
82 3soa_A Calcium/calmodulin-depe 100.0 3.1E-39 1E-43 347.2 21.5 242 343-607 16-268 (444)
83 3v8s_A RHO-associated protein 100.0 5E-40 1.7E-44 349.4 15.2 241 343-607 74-330 (410)
84 4fr4_A YANK1, serine/threonine 100.0 2.1E-39 7.1E-44 341.7 19.6 240 343-606 20-271 (384)
85 3qup_A Tyrosine-protein kinase 100.0 9.7E-40 3.3E-44 337.6 16.6 254 343-617 28-302 (323)
86 3uzp_A CKI-delta, CKID, casein 100.0 1.2E-38 3.9E-43 325.1 24.3 255 343-617 14-284 (296)
87 1qpc_A LCK kinase; alpha beta 100.0 2.2E-39 7.6E-44 327.6 18.8 249 343-616 18-272 (279)
88 3g2f_A Bone morphogenetic prot 100.0 1.7E-39 5.8E-44 337.7 18.4 267 343-625 18-330 (336)
89 2ozo_A Tyrosine-protein kinase 100.0 2E-39 7E-44 362.9 20.4 247 345-617 343-602 (613)
90 1fot_A TPK1 delta, CAMP-depend 100.0 2.3E-39 7.9E-44 333.6 19.2 238 343-607 11-259 (318)
91 3kmu_A ILK, integrin-linked ki 100.0 1.1E-39 3.7E-44 328.0 16.4 248 343-613 15-270 (271)
92 1ob3_A PFPK5, cell division co 100.0 4.7E-40 1.6E-44 334.3 13.7 253 343-607 7-281 (288)
93 1mp8_A Focal adhesion kinase 1 100.0 1.3E-39 4.3E-44 329.9 16.7 247 343-615 20-278 (281)
94 2ivs_A Proto-oncogene tyrosine 100.0 5.4E-40 1.8E-44 337.9 13.9 252 342-614 27-312 (314)
95 3p1a_A MYT1 kinase, membrane-a 100.0 2E-39 6.8E-44 333.5 18.1 237 343-607 62-305 (311)
96 3c1x_A Hepatocyte growth facto 100.0 7.6E-40 2.6E-44 344.8 15.2 252 343-619 94-361 (373)
97 3kfa_A Tyrosine-protein kinase 100.0 1E-39 3.5E-44 331.6 15.5 249 343-615 18-273 (288)
98 2pvf_A Fibroblast growth facto 100.0 3.9E-39 1.3E-43 334.8 20.1 258 342-619 39-324 (334)
99 4fvq_A Tyrosine-protein kinase 100.0 1.1E-39 3.6E-44 331.7 15.3 247 343-615 13-277 (289)
100 4hgt_A Casein kinase I isoform 100.0 8.6E-39 2.9E-43 325.9 21.8 254 343-616 14-283 (296)
101 3gxj_A TGF-beta receptor type- 100.0 2.3E-41 7.9E-46 346.2 2.7 255 343-615 8-299 (303)
102 3lxp_A Non-receptor tyrosine-p 100.0 1.4E-39 4.6E-44 335.9 15.9 258 343-620 36-317 (318)
103 1u5q_A Serine/threonine protei 100.0 4.9E-39 1.7E-43 335.6 20.2 242 343-609 59-308 (348)
104 2x4f_A Myosin light chain kina 100.0 2.3E-39 8E-44 341.2 17.8 242 343-606 94-342 (373)
105 3gni_B Strad alpha; kinase fol 100.0 7.8E-39 2.7E-43 339.8 22.0 261 343-612 30-341 (389)
106 4e5w_A Tyrosine-protein kinase 100.0 1.8E-39 6.2E-44 332.1 16.5 252 343-612 26-301 (302)
107 2w4o_A Calcium/calmodulin-depe 100.0 5E-39 1.7E-43 335.8 20.2 242 343-607 58-306 (349)
108 1mqb_A Ephrin type-A receptor 100.0 4.3E-39 1.5E-43 334.3 19.5 249 343-616 49-312 (333)
109 1u59_A Tyrosine-protein kinase 100.0 4.3E-39 1.5E-43 327.1 19.1 248 344-617 16-276 (287)
110 3pls_A Macrophage-stimulating 100.0 2.8E-39 9.6E-44 330.0 17.8 251 343-618 26-292 (298)
111 2v62_A Serine/threonine-protei 100.0 1.7E-39 5.8E-44 339.1 16.4 256 343-615 42-330 (345)
112 4aw2_A Serine/threonine-protei 100.0 1.6E-39 5.4E-44 348.2 16.4 244 343-607 79-339 (437)
113 2i0e_A Protein kinase C-beta I 100.0 3.8E-39 1.3E-43 336.6 18.4 239 343-607 25-277 (353)
114 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.4E-39 2.2E-43 337.4 20.1 248 343-617 70-343 (365)
115 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.6E-39 1.9E-43 335.2 19.4 238 343-607 46-294 (350)
116 2ac3_A MAP kinase-interacting 100.0 7.5E-39 2.6E-43 329.8 20.1 249 344-607 19-296 (316)
117 1b6c_B TGF-B superfamily recep 100.0 4.9E-39 1.7E-43 335.0 18.8 256 343-616 47-339 (342)
118 3g33_A Cell division protein k 100.0 3.8E-39 1.3E-43 330.9 17.7 256 343-607 14-297 (308)
119 3lzb_A Epidermal growth factor 100.0 2.5E-39 8.4E-44 335.2 16.0 246 343-614 20-279 (327)
120 3og7_A AKAP9-BRAF fusion prote 100.0 5.8E-39 2E-43 326.4 18.5 248 343-613 29-288 (289)
121 2qr7_A Ribosomal protein S6 ki 100.0 1.7E-39 5.9E-44 338.1 14.8 244 343-608 27-279 (342)
122 3mtl_A Cell division protein k 100.0 5.8E-40 2E-44 339.5 11.0 280 343-634 7-311 (324)
123 2acx_A G protein-coupled recep 100.0 7.8E-39 2.7E-43 351.1 20.4 244 343-607 189-445 (576)
124 1fvr_A Tyrosine-protein kinase 100.0 1.2E-38 4.1E-43 330.1 20.6 255 343-617 30-304 (327)
125 1kob_A Twitchin; kinase, intra 100.0 7.3E-39 2.5E-43 338.5 19.2 243 343-607 56-305 (387)
126 4eut_A Serine/threonine-protei 100.0 9.8E-39 3.4E-43 339.6 20.3 265 343-615 14-311 (396)
127 3o0g_A Cell division protein k 100.0 1.2E-38 4.1E-43 324.6 20.0 251 343-607 7-283 (292)
128 2xir_A Vascular endothelial gr 100.0 2.1E-39 7.3E-44 333.8 14.6 256 343-617 32-314 (316)
129 2pmi_A Negative RE, cyclin-dep 100.0 2.1E-39 7E-44 334.4 14.4 257 343-607 10-294 (317)
130 2zmd_A Dual specificity protei 100.0 1.8E-38 6.1E-43 336.6 21.9 241 343-608 61-322 (390)
131 3f66_A Hepatocyte growth facto 100.0 4.5E-39 1.5E-43 328.6 16.7 250 343-617 30-295 (298)
132 3cok_A Serine/threonine-protei 100.0 4.4E-39 1.5E-43 325.3 16.3 239 343-607 16-263 (278)
133 3a62_A Ribosomal protein S6 ki 100.0 6.9E-39 2.4E-43 331.9 18.0 238 343-607 22-277 (327)
134 3ork_A Serine/threonine protei 100.0 3.9E-39 1.3E-43 331.4 16.0 256 343-621 17-289 (311)
135 2vd5_A DMPK protein; serine/th 100.0 2.7E-39 9.1E-44 344.1 15.0 242 343-607 66-328 (412)
136 3fdn_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 322.5 18.7 239 343-608 14-259 (279)
137 3lxl_A Tyrosine-protein kinase 100.0 1.5E-39 5.2E-44 336.9 12.6 258 343-618 28-308 (327)
138 3dbq_A Dual specificity protei 100.0 1.3E-38 4.5E-43 332.1 19.7 241 343-608 14-275 (343)
139 3brb_A Proto-oncogene tyrosine 100.0 1.3E-38 4.5E-43 327.6 19.4 254 342-616 38-311 (313)
140 3ll6_A Cyclin G-associated kin 100.0 3.8E-39 1.3E-43 334.8 15.4 253 343-619 33-314 (337)
141 3cc6_A Protein tyrosine kinase 100.0 3.7E-39 1.3E-43 326.5 14.9 247 343-615 17-275 (281)
142 2a19_B Interferon-induced, dou 100.0 5.5E-39 1.9E-43 325.3 16.1 243 343-617 16-278 (284)
143 3lm5_A Serine/threonine-protei 100.0 8E-39 2.8E-43 331.4 17.7 245 343-607 34-288 (327)
144 4fl3_A Tyrosine-protein kinase 100.0 3.4E-39 1.2E-43 362.0 15.8 244 344-614 375-632 (635)
145 4agu_A Cyclin-dependent kinase 100.0 3.9E-39 1.3E-43 331.2 14.9 253 343-607 8-285 (311)
146 3oz6_A Mitogen-activated prote 100.0 2.3E-38 7.8E-43 336.1 21.0 254 343-612 14-336 (388)
147 3sv0_A Casein kinase I-like; t 100.0 2.5E-38 8.7E-43 342.9 21.7 254 343-615 12-280 (483)
148 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.6E-38 9E-43 346.1 21.6 244 344-606 191-448 (543)
149 2wqm_A Serine/threonine-protei 100.0 3.5E-38 1.2E-42 323.9 21.1 256 343-617 37-301 (310)
150 3dls_A PAS domain-containing s 100.0 4.8E-39 1.6E-43 334.1 14.6 232 343-607 29-275 (335)
151 2y94_A 5'-AMP-activated protei 100.0 1.4E-38 4.8E-43 344.3 18.9 238 343-607 21-267 (476)
152 2a2a_A Death-associated protei 100.0 5.5E-38 1.9E-42 324.3 22.3 243 342-607 16-273 (321)
153 3is5_A Calcium-dependent prote 100.0 7.2E-39 2.5E-43 325.1 15.3 244 343-607 27-279 (285)
154 1byg_A CSK, protein (C-termina 100.0 5.1E-39 1.7E-43 324.9 14.0 247 343-615 26-275 (278)
155 2i1m_A Macrophage colony-stimu 100.0 1.1E-39 3.7E-44 338.8 9.3 254 343-615 51-328 (333)
156 3f3z_A Calcium/calmodulin-depe 100.0 4.1E-38 1.4E-42 318.0 20.2 241 343-607 14-262 (277)
157 2yex_A Serine/threonine-protei 100.0 4.5E-38 1.5E-42 317.4 20.4 241 343-607 12-262 (276)
158 2buj_A Serine/threonine-protei 100.0 7.2E-39 2.5E-43 330.1 14.7 256 343-618 34-311 (317)
159 3q60_A ROP5B; pseudokinase, tr 100.0 1.5E-39 5.1E-44 343.0 9.7 247 343-606 67-352 (371)
160 2h34_A Serine/threonine-protei 100.0 5.2E-38 1.8E-42 322.6 20.5 251 343-617 39-300 (309)
161 3kvw_A DYRK2, dual specificity 100.0 8E-39 2.7E-43 343.5 14.9 193 343-542 102-303 (429)
162 3hko_A Calcium/calmodulin-depe 100.0 1.1E-38 3.9E-43 332.7 15.6 247 343-607 31-331 (345)
163 1xbb_A Tyrosine-protein kinase 100.0 3E-38 1E-42 321.4 18.4 244 345-615 24-281 (291)
164 3ttj_A Mitogen-activated prote 100.0 3.3E-38 1.1E-42 341.8 19.7 251 343-607 67-356 (464)
165 1x8b_A WEE1HU, WEE1-like prote 100.0 2.1E-38 7.3E-43 321.5 17.1 241 343-607 16-280 (289)
166 2eue_A Carbon catabolite derep 100.0 1.4E-38 4.7E-43 321.2 15.6 237 343-607 18-263 (275)
167 1wak_A Serine/threonine-protei 100.0 2.2E-38 7.6E-43 336.9 17.9 258 343-607 42-392 (397)
168 3kk8_A Calcium/calmodulin depe 100.0 6.1E-38 2.1E-42 317.8 20.3 242 343-607 11-262 (284)
169 2jii_A Serine/threonine-protei 100.0 3.5E-38 1.2E-42 330.1 19.0 256 343-617 47-340 (352)
170 3bhy_A Death-associated protei 100.0 1E-37 3.6E-42 315.9 21.9 251 343-616 10-277 (283)
171 2r5t_A Serine/threonine-protei 100.0 1.3E-38 4.3E-43 335.0 15.3 234 343-602 43-285 (373)
172 3byv_A Rhoptry kinase; malaria 100.0 6.3E-40 2.2E-44 346.6 5.4 243 343-612 78-367 (377)
173 1vzo_A Ribosomal protein S6 ki 100.0 1.4E-38 4.6E-43 333.5 15.5 244 343-608 59-323 (355)
174 1p4o_A Insulin-like growth fac 100.0 7.6E-39 2.6E-43 330.7 13.2 251 343-614 30-300 (322)
175 3rgf_A Cyclin-dependent kinase 100.0 3.7E-38 1.3E-42 336.4 18.7 259 343-607 26-334 (405)
176 4ejn_A RAC-alpha serine/threon 100.0 1.4E-38 4.6E-43 344.0 15.5 238 343-607 153-405 (446)
177 3i6u_A CDS1, serine/threonine- 100.0 9.5E-38 3.3E-42 334.3 21.5 242 343-607 140-400 (419)
178 3nsz_A CK II alpha, casein kin 100.0 5.8E-38 2E-42 325.2 19.0 251 343-607 41-320 (330)
179 4aaa_A Cyclin-dependent kinase 100.0 7.1E-38 2.4E-42 324.9 19.5 254 343-607 30-307 (331)
180 1cm8_A Phosphorylated MAP kina 100.0 1.3E-38 4.4E-43 335.0 14.0 253 343-612 30-315 (367)
181 2w1i_A JAK2; chromosomal rearr 100.0 2.3E-38 7.9E-43 327.8 15.5 254 343-614 46-323 (326)
182 1t4h_A Serine/threonine-protei 100.0 6.4E-38 2.2E-42 318.8 18.4 242 343-607 31-283 (290)
183 3mi9_A Cell division protein k 100.0 3.4E-38 1.2E-42 330.0 16.5 253 343-607 22-312 (351)
184 2y7j_A Phosphorylase B kinase 100.0 1.7E-37 6E-42 326.2 21.5 243 343-607 99-360 (365)
185 1z57_A Dual specificity protei 100.0 2.8E-38 9.7E-43 328.4 15.3 254 343-607 19-329 (339)
186 3eqc_A Dual specificity mitoge 100.0 5.9E-38 2E-42 329.4 17.5 256 343-607 38-325 (360)
187 1q8y_A SR protein kinase; tran 100.0 1.2E-37 4.2E-42 328.4 20.0 258 343-607 24-334 (373)
188 1u46_A ACK-1, activated CDC42 100.0 9.5E-39 3.2E-43 324.9 10.9 250 343-617 23-288 (291)
189 2x7f_A TRAF2 and NCK-interacti 100.0 6E-38 2.1E-42 324.6 17.1 243 343-607 29-287 (326)
190 2vgo_A Serine/threonine-protei 100.0 1.5E-37 5.2E-42 315.0 19.6 238 343-607 19-263 (284)
191 2jam_A Calcium/calmodulin-depe 100.0 1.7E-37 5.8E-42 318.0 19.7 242 343-607 14-262 (304)
192 3mwu_A Calmodulin-domain prote 100.0 1.2E-37 4.1E-42 340.3 19.9 241 343-607 27-277 (486)
193 3rp9_A Mitogen-activated prote 100.0 7.4E-38 2.5E-42 339.6 18.0 189 343-541 58-298 (458)
194 2rku_A Serine/threonine-protei 100.0 7.5E-38 2.6E-42 319.0 16.8 239 343-608 20-267 (294)
195 3com_A Serine/threonine-protei 100.0 1E-37 3.6E-42 321.0 18.1 241 343-607 34-279 (314)
196 3pfq_A PKC-B, PKC-beta, protei 100.0 6.9E-38 2.4E-42 353.7 18.2 239 343-607 346-598 (674)
197 1ua2_A CAK, cell division prot 100.0 1.1E-37 3.9E-42 325.4 18.2 255 343-608 15-293 (346)
198 2yfx_A Tyrosine-protein kinase 100.0 5.8E-38 2E-42 325.0 15.6 252 343-615 35-306 (327)
199 3a7i_A MST3 kinase, serine/thr 100.0 2E-37 6.8E-42 317.3 19.3 241 343-610 27-274 (303)
200 2clq_A Mitogen-activated prote 100.0 6.9E-38 2.4E-42 319.2 15.7 243 344-607 28-279 (295)
201 2owb_A Serine/threonine-protei 100.0 5.6E-38 1.9E-42 326.2 15.2 238 343-607 46-292 (335)
202 3q5i_A Protein kinase; CDPK, m 100.0 1.4E-37 4.8E-42 341.3 18.9 241 343-607 41-302 (504)
203 3nyv_A Calmodulin-domain prote 100.0 4.9E-38 1.7E-42 343.4 15.1 241 343-607 31-282 (484)
204 3lij_A Calcium/calmodulin depe 100.0 1.4E-37 4.8E-42 340.4 18.0 245 343-611 42-298 (494)
205 2vx3_A Dual specificity tyrosi 100.0 1.1E-37 3.6E-42 330.2 16.4 193 343-542 59-262 (382)
206 2h6d_A 5'-AMP-activated protei 100.0 3.3E-37 1.1E-41 311.1 19.3 238 343-607 16-262 (276)
207 2ycf_A Serine/threonine-protei 100.0 5.6E-37 1.9E-41 316.8 21.3 241 343-606 15-274 (322)
208 2fst_X Mitogen-activated prote 100.0 3.1E-38 1.1E-42 331.9 11.9 251 343-607 34-312 (367)
209 2pml_X PFPK7, Ser/Thr protein 100.0 2.1E-37 7.3E-42 323.4 18.0 252 343-607 36-323 (348)
210 3pg1_A Mitogen-activated prote 100.0 2.9E-37 1E-41 324.3 19.0 250 343-607 27-317 (362)
211 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.6E-38 2.6E-42 324.4 14.2 253 343-607 39-319 (329)
212 2r3i_A Cell division protein k 100.0 3.2E-37 1.1E-41 314.9 18.7 254 343-606 8-283 (299)
213 2j7t_A Serine/threonine-protei 100.0 7E-38 2.4E-42 320.4 13.7 242 343-607 24-276 (302)
214 3fme_A Dual specificity mitoge 100.0 1.8E-37 6.3E-42 315.2 16.6 244 343-606 12-266 (290)
215 3n9x_A Phosphotransferase; mal 100.0 4.1E-37 1.4E-41 330.8 20.2 187 343-539 31-253 (432)
216 3fhr_A MAP kinase-activated pr 100.0 1.3E-37 4.3E-42 323.6 15.6 246 343-608 34-289 (336)
217 2xrw_A Mitogen-activated prote 100.0 3.5E-37 1.2E-41 324.8 19.0 247 343-607 30-319 (371)
218 2rio_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 335.3 15.4 245 343-606 20-295 (434)
219 2w5a_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 315.2 13.9 249 343-610 11-271 (279)
220 4e7w_A Glycogen synthase kinas 100.0 2.3E-37 7.7E-42 328.7 17.0 258 343-613 45-330 (394)
221 2y4i_B KSR2, HKSR2, kinase sup 100.0 9.4E-38 3.2E-42 322.0 13.4 246 343-615 38-304 (319)
222 1phk_A Phosphorylase kinase; g 100.0 6E-37 2.1E-41 312.8 19.1 242 343-606 22-283 (298)
223 2j0j_A Focal adhesion kinase 1 100.0 3.6E-37 1.2E-41 346.9 19.0 246 343-614 395-652 (656)
224 2vwi_A Serine/threonine-protei 100.0 4.9E-38 1.7E-42 321.5 10.7 253 343-607 20-288 (303)
225 2eu9_A Dual specificity protei 100.0 2.1E-37 7.3E-42 324.0 15.4 254 343-607 24-334 (355)
226 3an0_A Dual specificity mitoge 100.0 2.4E-37 8.3E-42 322.1 15.6 245 343-607 56-311 (340)
227 4exu_A Mitogen-activated prote 100.0 1.7E-37 5.7E-42 327.3 14.3 247 343-607 47-324 (371)
228 3qyz_A Mitogen-activated prote 100.0 2.5E-37 8.7E-42 325.1 15.6 251 343-607 32-314 (364)
229 1blx_A Cyclin-dependent kinase 100.0 3.4E-37 1.2E-41 318.9 16.1 252 343-607 16-297 (326)
230 3eb0_A Putative uncharacterize 100.0 3.5E-37 1.2E-41 326.2 16.6 259 343-613 12-330 (383)
231 1j1b_A Glycogen synthase kinas 100.0 3.5E-37 1.2E-41 329.9 16.5 259 343-612 59-344 (420)
232 3e3p_A Protein kinase, putativ 100.0 1.1E-36 3.7E-41 319.6 19.8 263 343-613 28-323 (360)
233 3coi_A Mitogen-activated prote 100.0 5.8E-37 2E-41 320.9 17.0 247 343-607 29-306 (353)
234 3cek_A Dual specificity protei 100.0 2.4E-36 8.1E-41 310.8 20.9 241 343-608 33-294 (313)
235 1zy4_A Serine/threonine-protei 100.0 1.7E-36 5.9E-41 309.7 18.9 241 343-607 11-284 (303)
236 2wtk_C Serine/threonine-protei 100.0 3.6E-36 1.2E-40 308.1 20.5 239 343-607 10-264 (305)
237 3aln_A Dual specificity mitoge 100.0 5.7E-37 1.9E-41 317.5 14.7 249 343-607 27-286 (327)
238 2b9h_A MAP kinase FUS3, mitoge 100.0 1.6E-36 5.5E-41 317.5 17.9 251 343-607 16-306 (353)
239 2wei_A Calmodulin-domain prote 100.0 4.1E-36 1.4E-40 305.0 19.2 241 343-607 27-277 (287)
240 3p23_A Serine/threonine-protei 100.0 1.2E-36 4E-41 326.5 15.7 239 343-606 29-283 (432)
241 3a99_A Proto-oncogene serine/t 100.0 3.7E-37 1.3E-41 317.9 11.4 233 343-607 48-294 (320)
242 2i6l_A Mitogen-activated prote 100.0 6.5E-37 2.2E-41 315.5 12.7 248 343-607 16-306 (320)
243 2dyl_A Dual specificity mitoge 100.0 1.2E-36 4.1E-41 313.5 13.7 242 343-607 30-284 (318)
244 2iwi_A Serine/threonine-protei 100.0 1.6E-36 5.6E-41 311.8 12.0 233 343-607 36-284 (312)
245 3uqc_A Probable conserved tran 100.0 1.2E-35 4.2E-40 301.2 17.5 229 343-617 36-269 (286)
246 2pzi_A Probable serine/threoni 100.0 1.5E-35 5.2E-40 336.6 18.0 233 343-612 85-327 (681)
247 3m2w_A MAP kinase-activated pr 100.0 2.2E-35 7.5E-40 301.6 17.1 225 344-608 24-258 (299)
248 3qa8_A MGC80376 protein; kinas 100.0 8.9E-36 3.1E-40 330.0 11.5 263 342-615 18-311 (676)
249 3dzo_A Rhoptry kinase domain; 100.0 4E-35 1.4E-39 313.3 12.0 236 343-606 83-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 6.4E-35 2.2E-39 303.3 10.2 240 341-607 23-332 (336)
251 4azs_A Methyltransferase WBDD; 99.9 2.5E-29 8.4E-34 277.9 3.7 181 345-537 241-437 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 1.3E-27 4.5E-32 245.4 12.6 189 25-216 2-203 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 6.4E-26 2.2E-30 249.3 7.6 177 343-539 341-539 (540)
254 3rgz_A Protein brassinosteroid 99.9 2.6E-25 8.9E-30 256.1 11.5 190 22-215 5-228 (768)
255 4eco_A Uncharacterized protein 99.9 4E-25 1.4E-29 249.0 6.7 186 26-216 27-336 (636)
256 4ecn_A Leucine-rich repeat pro 99.9 6E-25 2E-29 252.5 6.5 186 25-216 265-579 (876)
257 4fcg_A Uncharacterized protein 99.9 8.3E-23 2.8E-27 210.9 7.8 186 24-216 22-235 (328)
258 1zar_A RIO2 kinase; serine kin 99.9 3.1E-22 1.1E-26 201.7 10.3 151 343-523 95-274 (282)
259 3rgz_A Protein brassinosteroid 99.8 9.4E-22 3.2E-26 226.4 9.4 114 117-230 631-750 (768)
260 3m19_A Variable lymphocyte rec 99.8 2.4E-20 8.3E-25 184.8 14.9 151 70-221 36-193 (251)
261 3e6j_A Variable lymphocyte rec 99.8 1E-19 3.5E-24 177.7 14.1 149 49-200 12-173 (229)
262 1ogq_A PGIP-2, polygalacturona 99.8 3E-20 1E-24 190.5 6.2 145 69-214 125-272 (313)
263 2o6s_A Variable lymphocyte rec 99.8 4.7E-19 1.6E-23 170.2 14.2 145 58-203 8-165 (208)
264 2o6q_A Variable lymphocyte rec 99.8 4.4E-19 1.5E-23 177.8 14.0 146 70-216 38-187 (270)
265 2v70_A SLIT-2, SLIT homolog 2 99.8 2.6E-19 8.9E-24 173.6 11.3 145 73-221 15-167 (220)
266 2v9t_B SLIT homolog 2 protein 99.8 5E-19 1.7E-23 171.6 12.2 135 74-212 16-154 (220)
267 2v9t_B SLIT homolog 2 protein 99.8 2.3E-18 7.9E-23 166.9 13.7 142 58-200 12-166 (220)
268 2v70_A SLIT-2, SLIT homolog 2 99.8 3E-18 1E-22 166.1 13.5 145 58-202 12-169 (220)
269 1zth_A RIO1 serine protein kin 99.8 1.6E-18 5.6E-23 172.3 10.8 132 343-492 52-219 (258)
270 2o6q_A Variable lymphocyte rec 99.8 9.4E-18 3.2E-22 168.1 16.0 153 69-222 61-220 (270)
271 3rfs_A Internalin B, repeat mo 99.8 7.8E-18 2.7E-22 168.8 15.4 150 69-221 63-219 (272)
272 4fcg_A Uncharacterized protein 99.7 1.8E-18 6.2E-23 178.3 9.7 144 69-216 104-259 (328)
273 2xot_A Amphoterin-induced prot 99.7 1.4E-18 4.9E-23 181.7 8.7 165 58-223 19-205 (361)
274 3e6j_A Variable lymphocyte rec 99.7 1.5E-17 5E-22 162.3 15.0 153 59-221 14-173 (229)
275 1ozn_A Reticulon 4 receptor; N 99.7 1.4E-17 4.9E-22 168.1 12.4 147 69-216 56-207 (285)
276 1w8a_A SLIT protein; signaling 99.7 4.3E-18 1.5E-22 161.3 7.4 128 72-203 11-143 (192)
277 1p9a_G Platelet glycoprotein I 99.7 3.4E-17 1.2E-21 165.7 14.2 143 69-215 31-177 (290)
278 1ozn_A Reticulon 4 receptor; N 99.7 2.8E-17 9.5E-22 165.9 12.9 147 69-216 32-183 (285)
279 1w8a_A SLIT protein; signaling 99.7 3E-17 1E-21 155.5 11.8 152 58-209 9-172 (192)
280 2z66_A Variable lymphocyte rec 99.7 1.2E-17 4.3E-22 170.3 9.2 157 57-215 7-180 (306)
281 3m19_A Variable lymphocyte rec 99.7 8.2E-17 2.8E-21 159.3 14.9 154 56-216 4-161 (251)
282 2z80_A TOLL-like receptor 2, v 99.7 6.9E-18 2.4E-22 175.9 7.3 165 49-216 23-204 (353)
283 4g8a_A TOLL-like receptor 4; l 99.7 9.5E-18 3.2E-22 188.7 8.2 153 60-213 34-200 (635)
284 2o6s_A Variable lymphocyte rec 99.7 1.8E-16 6.3E-21 152.0 16.0 151 62-221 5-162 (208)
285 2z81_A CD282 antigen, TOLL-lik 99.7 8.5E-18 2.9E-22 186.0 7.3 157 56-215 4-177 (549)
286 1p9a_G Platelet glycoprotein I 99.7 5.1E-17 1.7E-21 164.4 11.9 149 69-222 55-210 (290)
287 3rfs_A Internalin B, repeat mo 99.7 1.2E-16 4E-21 160.3 14.2 136 67-203 83-222 (272)
288 3oja_B Anopheles plasmodium-re 99.7 3E-17 1E-21 183.5 10.7 170 47-217 10-202 (597)
289 3o6n_A APL1; leucine-rich repe 99.7 2.6E-17 8.8E-22 174.1 9.6 169 48-217 5-196 (390)
290 3zyi_A Leucine-rich repeat-con 99.7 6.4E-17 2.2E-21 174.5 12.8 157 58-215 55-247 (452)
291 2id5_A Lingo-1, leucine rich r 99.7 5.4E-17 1.8E-21 176.4 12.1 158 58-216 12-182 (477)
292 2z66_A Variable lymphocyte rec 99.7 4.9E-17 1.7E-21 165.9 10.7 145 69-215 78-228 (306)
293 2z62_A TOLL-like receptor 4, v 99.7 4.1E-17 1.4E-21 163.9 9.8 143 70-213 29-176 (276)
294 3v47_A TOLL-like receptor 5B a 99.7 4.7E-17 1.6E-21 175.7 10.5 151 58-209 9-177 (455)
295 2z62_A TOLL-like receptor 4, v 99.7 1.4E-16 4.6E-21 160.1 12.7 152 69-221 52-238 (276)
296 2ell_A Acidic leucine-rich nuc 99.7 6E-17 2E-21 149.8 8.8 132 69-204 24-164 (168)
297 2o6r_A Variable lymphocyte rec 99.7 1.9E-16 6.4E-21 147.9 12.1 125 75-203 13-141 (177)
298 4b8c_D Glucose-repressible alc 99.7 2.1E-17 7.2E-22 188.0 6.3 178 26-209 129-339 (727)
299 3vq2_A TLR4, TOLL-like recepto 99.7 6.5E-17 2.2E-21 181.2 10.1 152 60-212 14-179 (606)
300 1xku_A Decorin; proteoglycan, 99.7 2E-16 6.7E-21 163.3 12.9 142 57-200 31-185 (330)
301 3v47_A TOLL-like receptor 5B a 99.7 8.6E-17 2.9E-21 173.6 10.4 129 94-222 275-410 (455)
302 2wfh_A SLIT homolog 2 protein 99.7 2.4E-16 8.2E-21 149.3 11.8 123 73-200 14-140 (193)
303 4eco_A Uncharacterized protein 99.7 2.8E-17 9.6E-22 184.9 6.1 133 80-216 194-359 (636)
304 2ft3_A Biglycan; proteoglycan, 99.7 3.7E-16 1.3E-20 161.3 13.3 157 57-217 33-203 (332)
305 3t6q_A CD180 antigen; protein- 99.7 1.2E-16 4.1E-21 179.0 10.3 154 59-213 14-180 (606)
306 2xwt_C Thyrotropin receptor; s 99.7 7.4E-17 2.5E-21 158.4 7.0 133 69-205 31-174 (239)
307 3zyj_A Leucine-rich repeat-con 99.7 4.5E-16 1.5E-20 167.3 13.4 154 69-224 112-296 (440)
308 4ezg_A Putative uncharacterize 99.6 2E-16 7E-21 150.4 9.2 140 69-216 44-187 (197)
309 3vq2_A TLR4, TOLL-like recepto 99.6 1.6E-16 5.3E-21 178.1 9.4 145 69-215 376-526 (606)
310 3j0a_A TOLL-like receptor 5; m 99.6 2.8E-16 9.7E-21 182.6 11.3 136 90-225 422-565 (844)
311 4g8a_A TOLL-like receptor 4; l 99.6 4.9E-16 1.7E-20 174.6 12.9 152 58-216 23-179 (635)
312 3zyi_A Leucine-rich repeat-con 99.6 6.7E-16 2.3E-20 166.5 13.4 154 69-224 123-307 (452)
313 1wwl_A Monocyte differentiatio 99.6 6.6E-17 2.2E-21 165.5 5.1 132 70-202 96-244 (312)
314 3j0a_A TOLL-like receptor 5; m 99.6 3.1E-16 1E-20 182.4 11.0 149 58-209 15-171 (844)
315 2je0_A Acidic leucine-rich nuc 99.6 1.4E-16 4.9E-21 144.1 6.0 124 69-195 17-149 (149)
316 4ecn_A Leucine-rich repeat pro 99.6 1.2E-16 4E-21 183.8 6.0 145 68-216 447-625 (876)
317 3zyj_A Leucine-rich repeat-con 99.6 9E-16 3.1E-20 164.9 12.6 156 58-215 44-236 (440)
318 3cvr_A Invasion plasmid antige 99.6 5E-16 1.7E-20 170.7 10.7 150 48-217 35-190 (571)
319 1xku_A Decorin; proteoglycan, 99.6 8.6E-16 2.9E-20 158.5 11.2 144 70-216 122-269 (330)
320 3oja_A Leucine-rich immune mol 99.6 1.5E-16 5.1E-21 173.0 5.5 146 69-221 99-251 (487)
321 2xot_A Amphoterin-induced prot 99.6 2E-15 6.9E-20 157.7 13.6 148 60-216 14-169 (361)
322 3oja_A Leucine-rich immune mol 99.6 3.6E-16 1.2E-20 170.0 8.1 97 118-215 120-219 (487)
323 4glp_A Monocyte differentiatio 99.6 4E-16 1.4E-20 159.5 8.0 148 69-218 117-283 (310)
324 2id5_A Lingo-1, leucine rich r 99.6 6.4E-16 2.2E-20 167.9 10.1 148 68-216 55-206 (477)
325 4gyi_A RIO2 kinase; protein ki 99.6 1.1E-15 3.7E-20 158.1 10.9 133 343-492 100-265 (397)
326 2ft3_A Biglycan; proteoglycan, 99.6 1.1E-15 3.7E-20 157.9 10.9 143 70-216 124-270 (332)
327 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 1.9E-15 6.5E-20 167.7 13.4 152 67-222 351-512 (562)
328 3t6q_A CD180 antigen; protein- 99.6 4.5E-16 1.5E-20 174.3 8.5 145 69-215 376-528 (606)
329 1ziw_A TOLL-like receptor 3; i 99.6 6.9E-16 2.4E-20 175.3 10.0 137 69-206 25-165 (680)
330 1xeu_A Internalin C; cellular 99.6 1.7E-15 5.7E-20 150.9 11.3 137 69-215 41-177 (263)
331 3oja_B Anopheles plasmodium-re 99.6 1.3E-15 4.5E-20 170.1 11.6 109 69-178 75-185 (597)
332 1wwl_A Monocyte differentiatio 99.6 2.6E-16 8.8E-21 161.1 5.2 146 69-217 121-284 (312)
333 4ezg_A Putative uncharacterize 99.6 8.3E-16 2.8E-20 146.1 8.2 127 69-200 66-195 (197)
334 2xwt_C Thyrotropin receptor; s 99.6 7E-16 2.4E-20 151.4 7.8 145 69-216 55-211 (239)
335 2wfh_A SLIT homolog 2 protein 99.6 2.1E-15 7.3E-20 142.7 10.7 119 58-178 11-140 (193)
336 2z7x_B TOLL-like receptor 1, v 99.6 1.5E-15 5E-20 166.9 10.3 148 69-221 324-482 (520)
337 2z63_A TOLL-like receptor 4, v 99.6 1.6E-15 5.6E-20 168.4 10.6 144 69-214 373-522 (570)
338 2je0_A Acidic leucine-rich nuc 99.6 7.1E-16 2.4E-20 139.5 6.3 123 92-216 15-146 (149)
339 2ell_A Acidic leucine-rich nuc 99.6 2E-15 6.7E-20 139.5 9.3 124 92-217 22-154 (168)
340 2z81_A CD282 antigen, TOLL-lik 99.6 2.6E-15 8.9E-20 166.0 11.7 146 69-222 361-512 (549)
341 4glp_A Monocyte differentiatio 99.6 6.4E-16 2.2E-20 157.9 5.8 146 70-216 92-257 (310)
342 3o6n_A APL1; leucine-rich repe 99.6 3.7E-15 1.3E-19 157.5 11.7 108 69-178 69-179 (390)
343 1ziw_A TOLL-like receptor 3; i 99.6 4.7E-15 1.6E-19 168.4 12.8 140 84-224 471-626 (680)
344 2z63_A TOLL-like receptor 4, v 99.6 2.1E-15 7.2E-20 167.5 8.2 143 69-212 28-175 (570)
345 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 9.2E-15 3.1E-19 162.2 12.5 139 69-210 52-195 (562)
346 3o53_A Protein LRIM1, AGAP0063 99.6 1.2E-15 4.2E-20 156.4 4.9 144 69-216 58-220 (317)
347 1h6t_A Internalin B; cell adhe 99.6 9.4E-15 3.2E-19 147.8 11.2 136 69-215 68-205 (291)
348 4ay9_X Follicle-stimulating ho 99.6 7.1E-15 2.4E-19 152.9 10.4 96 57-153 9-117 (350)
349 3o53_A Protein LRIM1, AGAP0063 99.6 7.4E-16 2.5E-20 158.0 2.7 138 70-214 100-241 (317)
350 4b8c_D Glucose-repressible alc 99.5 7.5E-16 2.6E-20 175.3 1.4 137 68-209 223-364 (727)
351 1h6t_A Internalin B; cell adhe 99.5 1.4E-14 4.9E-19 146.5 10.6 136 69-216 46-184 (291)
352 2z80_A TOLL-like receptor 2, v 99.5 1.7E-14 5.8E-19 150.2 11.5 149 60-216 26-180 (353)
353 1h6u_A Internalin H; cell adhe 99.5 1.5E-14 5.2E-19 147.6 10.7 136 69-215 63-200 (308)
354 2z7x_B TOLL-like receptor 1, v 99.5 4.9E-15 1.7E-19 162.7 7.4 139 69-210 21-164 (520)
355 1h6u_A Internalin H; cell adhe 99.5 1.4E-14 4.7E-19 147.9 10.0 139 67-216 83-223 (308)
356 1a9n_A U2A', U2A'; complex (nu 99.5 8.6E-15 2.9E-19 136.4 7.4 124 69-199 19-153 (176)
357 3g39_A Variable lymphocyte rec 99.5 3.5E-14 1.2E-18 131.4 11.4 105 72-180 12-118 (170)
358 1dce_A Protein (RAB geranylger 99.5 1.4E-14 4.8E-19 159.8 10.0 117 71-193 443-567 (567)
359 2r9u_A Variable lymphocyte rec 99.5 4.4E-14 1.5E-18 131.2 11.7 112 60-180 8-121 (174)
360 2o6r_A Variable lymphocyte rec 99.5 2.4E-14 8.2E-19 133.4 9.9 124 57-181 7-141 (177)
361 1ds9_A Outer arm dynein; leuci 99.5 6.5E-17 2.2E-21 154.0 -8.0 143 70-217 19-181 (198)
362 1m9s_A Internalin B; cell inva 99.5 3.2E-14 1.1E-18 157.9 11.6 137 69-216 65-203 (605)
363 3cvr_A Invasion plasmid antige 99.5 6.4E-14 2.2E-18 153.9 11.8 118 69-204 80-197 (571)
364 3g39_A Variable lymphocyte rec 99.5 9.4E-14 3.2E-18 128.5 10.7 103 96-201 11-117 (170)
365 1m9s_A Internalin B; cell inva 99.5 5.5E-14 1.9E-18 156.0 9.6 136 69-216 43-181 (605)
366 1jl5_A Outer protein YOPM; leu 99.5 1.2E-14 4.1E-19 156.5 3.7 135 69-215 11-158 (454)
367 2r9u_A Variable lymphocyte rec 99.5 1.7E-13 5.8E-18 127.2 11.1 102 96-200 14-119 (174)
368 1o6v_A Internalin A; bacterial 99.5 1.1E-13 3.6E-18 149.9 10.6 138 69-215 221-358 (466)
369 1xeu_A Internalin C; cellular 99.5 1.8E-13 6E-18 136.2 11.0 123 69-201 63-187 (263)
370 1a9n_A U2A', U2A'; complex (nu 99.4 7.6E-14 2.6E-18 129.9 7.0 124 89-217 14-147 (176)
371 3g06_A SSPH2 (leucine-rich rep 99.4 1E-13 3.5E-18 154.1 8.7 149 48-216 14-170 (622)
372 1jl5_A Outer protein YOPM; leu 99.4 6E-13 2.1E-17 143.1 13.4 132 70-216 112-243 (454)
373 3bz5_A Internalin-J, INLJ; leu 99.4 3.1E-13 1.1E-17 145.5 10.8 124 69-203 148-281 (457)
374 1o6v_A Internalin A; bacterial 99.4 3.2E-13 1.1E-17 146.1 10.6 138 69-215 199-336 (466)
375 1dce_A Protein (RAB geranylger 99.4 1.6E-13 5.4E-18 151.4 8.3 116 95-215 442-565 (567)
376 4fmz_A Internalin; leucine ric 99.4 3.5E-13 1.2E-17 139.8 9.5 139 69-215 177-316 (347)
377 4fmz_A Internalin; leucine ric 99.4 2.3E-13 7.9E-18 141.1 8.0 137 69-216 199-339 (347)
378 2ifg_A High affinity nerve gro 99.4 3.3E-13 1.1E-17 140.0 8.8 105 58-178 9-117 (347)
379 3bz5_A Internalin-J, INLJ; leu 99.4 1.5E-12 5E-17 140.2 13.5 133 69-215 106-238 (457)
380 2ast_B S-phase kinase-associat 99.4 9.2E-15 3.1E-19 151.0 -5.2 106 70-177 71-182 (336)
381 2ast_B S-phase kinase-associat 99.3 2.4E-14 8.3E-19 147.8 -5.2 147 69-216 93-253 (336)
382 3g06_A SSPH2 (leucine-rich rep 99.3 5.9E-12 2E-16 140.0 13.5 95 69-178 61-155 (622)
383 2ca6_A RAN GTPase-activating p 99.3 4E-14 1.4E-18 149.3 -4.5 148 69-216 60-250 (386)
384 2ifg_A High affinity nerve gro 99.3 4.1E-12 1.4E-16 131.7 9.4 102 97-200 11-117 (347)
385 3goz_A Leucine-rich repeat-con 99.3 2.3E-13 8E-18 142.1 -2.2 133 70-203 23-184 (362)
386 3tm0_A Aminoglycoside 3'-phosp 99.3 2.4E-11 8.2E-16 120.6 12.2 136 344-490 20-212 (263)
387 2ca6_A RAN GTPase-activating p 99.2 2.4E-13 8.3E-18 143.2 -3.0 147 69-216 122-309 (386)
388 1ds9_A Outer arm dynein; leuci 99.2 6.7E-14 2.3E-18 133.0 -7.7 123 90-216 14-146 (198)
389 3goz_A Leucine-rich repeat-con 99.2 8.7E-13 3E-17 137.7 -0.0 130 73-203 2-155 (362)
390 4ay9_X Follicle-stimulating ho 99.2 3.2E-11 1.1E-15 125.2 10.5 139 62-210 7-153 (350)
391 1nd4_A Aminoglycoside 3'-phosp 99.1 3.5E-10 1.2E-14 111.8 11.9 130 346-490 27-213 (264)
392 1z7x_W Ribonuclease inhibitor; 99.1 9.3E-13 3.2E-17 142.1 -7.9 148 69-216 227-404 (461)
393 1z7x_W Ribonuclease inhibitor; 99.1 8.7E-13 3E-17 142.3 -9.3 136 69-205 199-360 (461)
394 3rw6_A Nuclear RNA export fact 99.1 6.1E-13 2.1E-17 131.0 -10.0 160 55-218 77-259 (267)
395 3dxp_A Putative acyl-COA dehyd 99.0 1.7E-09 6E-14 112.4 12.9 140 344-491 44-248 (359)
396 3sb4_A Hypothetical leucine ri 98.9 1.3E-09 4.5E-14 111.9 9.3 143 69-215 101-302 (329)
397 3un9_A NLR family member X1; l 98.9 2.6E-11 9E-16 126.6 -6.3 106 94-199 101-224 (372)
398 3sb4_A Hypothetical leucine ri 98.9 1.3E-09 4.3E-14 112.0 6.4 131 84-216 83-280 (329)
399 3sg8_A APH(2'')-ID; antibiotic 98.9 1E-09 3.5E-14 111.3 5.2 183 344-538 26-287 (304)
400 3un9_A NLR family member X1; l 98.8 2.5E-11 8.5E-16 126.7 -11.0 133 69-201 101-254 (372)
401 3ogk_B Coronatine-insensitive 98.6 1.1E-09 3.7E-14 121.9 -5.5 60 140-199 463-526 (592)
402 3ogk_B Coronatine-insensitive 98.5 4.4E-09 1.5E-13 116.9 -4.3 141 70-213 139-296 (592)
403 3r70_A Aminoglycoside phosphot 98.5 5.6E-07 1.9E-11 91.7 11.5 132 344-491 43-237 (320)
404 1io0_A Tropomodulin; LRR prote 98.5 4.1E-09 1.4E-13 98.5 -4.8 111 89-199 31-164 (185)
405 3rw6_A Nuclear RNA export fact 98.4 6.8E-08 2.3E-12 94.9 3.5 100 90-192 137-257 (267)
406 4gkh_A Aminoglycoside 3'-phosp 98.4 9.4E-07 3.2E-11 87.6 11.5 136 345-491 31-223 (272)
407 3d1u_A Putative fructosamine-3 98.4 2.8E-06 9.5E-11 85.0 13.0 74 344-421 21-97 (288)
408 3tdw_A Gentamicin resistance p 98.3 4E-06 1.4E-10 84.7 12.5 136 344-491 25-224 (306)
409 3ats_A Putative uncharacterize 98.3 1.9E-06 6.3E-11 89.2 9.7 80 344-423 26-122 (357)
410 4fdw_A Leucine rich hypothetic 98.3 1.6E-06 5.5E-11 91.1 9.1 122 70-198 158-283 (401)
411 2p1m_B Transport inhibitor res 98.3 1.2E-08 4.1E-13 113.5 -8.1 122 70-193 106-242 (594)
412 2p1m_B Transport inhibitor res 98.2 1.3E-08 4.5E-13 113.1 -8.0 106 92-199 370-494 (594)
413 4fdw_A Leucine rich hypothetic 98.2 3.4E-06 1.2E-10 88.6 10.4 139 70-215 136-276 (401)
414 1io0_A Tropomodulin; LRR prote 98.2 4.8E-08 1.7E-12 91.1 -3.5 109 68-177 35-164 (185)
415 3ovc_A Hygromycin-B 4-O-kinase 98.2 6.6E-06 2.3E-10 85.2 11.7 74 344-422 47-122 (362)
416 2ra8_A Uncharacterized protein 98.1 5.2E-07 1.8E-11 93.3 2.0 38 140-177 252-292 (362)
417 2ra8_A Uncharacterized protein 98.0 5E-07 1.7E-11 93.4 -1.7 144 69-216 139-313 (362)
418 3jr1_A Putative fructosamine-3 97.9 7.3E-05 2.5E-09 75.4 12.5 140 344-487 42-232 (312)
419 2q83_A YTAA protein; 2635576, 97.9 4.9E-05 1.7E-09 77.8 10.6 142 345-490 39-251 (346)
420 2olc_A MTR kinase, methylthior 97.9 2.6E-05 9E-10 81.8 8.5 74 344-419 36-120 (397)
421 3f7w_A Putative fructosamine-3 97.7 0.00029 1E-08 70.2 12.5 74 344-421 21-97 (288)
422 3rfe_A Platelet glycoprotein I 97.6 0.0001 3.4E-09 64.0 6.2 57 121-177 11-68 (130)
423 3dxq_A Choline/ethanolamine ki 97.5 0.00057 1.9E-08 68.6 11.5 71 344-421 24-95 (301)
424 2pyw_A Uncharacterized protein 97.5 0.00035 1.2E-08 73.8 10.3 73 461-534 232-312 (420)
425 3e4g_A ATP synthase subunit S, 97.4 3.1E-05 1.1E-09 70.5 1.2 81 95-175 62-150 (176)
426 1zyl_A Hypothetical protein YI 97.4 0.0012 4E-08 67.0 12.4 144 345-491 33-223 (328)
427 3feg_A Choline/ethanolamine ki 97.2 0.0012 3.9E-08 68.4 10.1 143 344-490 56-253 (379)
428 2qg7_A Ethanolamine kinase PV0 97.2 0.0018 6.1E-08 68.9 11.3 74 344-421 114-188 (458)
429 1nw1_A Choline kinase (49.2 KD 97.1 0.00087 3E-08 70.8 8.6 73 344-421 79-159 (429)
430 2ppq_A HSK, HK, homoserine kin 97.1 0.0026 9E-08 64.2 11.9 145 344-490 28-216 (322)
431 3csv_A Aminoglycoside phosphot 97.1 0.0011 3.6E-08 67.5 8.5 143 345-491 25-217 (333)
432 3c5i_A Choline kinase; choline 96.9 0.0019 6.4E-08 66.8 8.7 74 344-421 39-121 (369)
433 1pgv_A TMD-1, tropomodulin TMD 96.9 8.2E-05 2.8E-09 69.0 -2.1 85 90-174 37-136 (197)
434 3e4g_A ATP synthase subunit S, 96.8 0.00037 1.3E-08 63.4 2.1 87 111-197 54-150 (176)
435 3rfe_A Platelet glycoprotein I 96.8 0.0026 8.9E-08 54.9 6.9 56 73-131 12-68 (130)
436 1pgv_A TMD-1, tropomodulin TMD 96.7 9E-05 3.1E-09 68.8 -2.8 109 68-177 40-170 (197)
437 4fs7_A Uncharacterized protein 96.7 0.004 1.4E-07 64.9 9.1 136 70-214 231-370 (394)
438 3i1a_A Spectinomycin phosphotr 96.7 0.0084 2.9E-07 61.1 11.1 69 347-421 32-108 (339)
439 4gt6_A Cell surface protein; l 96.6 0.0028 9.6E-08 66.1 7.5 111 84-199 255-370 (394)
440 4h09_A Hypothetical leucine ri 96.5 0.0087 3E-07 61.9 10.0 125 88-216 211-339 (379)
441 4gt6_A Cell surface protein; l 96.5 0.0046 1.6E-07 64.4 7.9 100 111-215 258-362 (394)
442 4fs7_A Uncharacterized protein 96.4 0.0084 2.9E-07 62.4 9.7 54 157-213 155-211 (394)
443 2yle_A Protein spire homolog 1 96.2 0.031 1.1E-06 52.1 10.7 102 420-537 34-135 (229)
444 3mes_A Choline kinase; malaria 96.1 0.0068 2.3E-07 63.5 6.8 73 345-421 77-157 (424)
445 4h09_A Hypothetical leucine ri 95.9 0.032 1.1E-06 57.5 10.5 85 86-173 232-319 (379)
446 3f2s_A CK, chetk-alpha, cholin 95.9 0.018 6.2E-07 59.7 8.4 143 344-490 58-279 (401)
447 2ks1_B Epidermal growth factor 92.6 0.057 1.9E-06 36.1 2.0 31 258-288 11-41 (44)
448 2l2t_A Receptor tyrosine-prote 92.4 0.049 1.7E-06 36.3 1.5 32 258-289 10-41 (44)
449 3g15_A CK, chetk-alpha, cholin 92.0 0.45 1.5E-05 49.3 9.2 29 463-491 246-280 (401)
450 2k1k_A Ephrin type-A receptor 91.7 0.042 1.4E-06 35.6 0.5 32 254-285 7-38 (38)
451 2jwa_A Receptor tyrosine-prote 87.7 0.16 5.5E-06 33.8 0.9 29 259-288 13-41 (44)
452 4ann_A ESSB; membrane protein, 83.9 2.7 9.1E-05 39.0 7.5 116 392-539 43-158 (215)
453 4ano_A ESSB; membrane protein, 76.1 4.7 0.00016 37.5 6.4 115 392-539 48-163 (219)
454 2k9y_A Ephrin type-A receptor 68.5 1.8 6E-05 28.4 1.2 6 264-269 19-24 (41)
455 3cxl_A N-chimerin; SH2, RHO-GA 64.9 1.1 3.7E-05 47.4 -0.8 58 344-405 148-215 (463)
456 2lz0_A Uncharacterized protein 49.3 29 0.00099 27.6 5.5 49 78-128 5-53 (100)
457 2klu_A T-cell surface glycopro 45.4 14 0.00047 26.6 2.5 17 263-279 12-29 (70)
458 1iij_A ERBB-2 receptor protein 44.2 2.5 8.7E-05 26.5 -1.2 23 262-285 12-34 (35)
459 3ls8_A Phosphatidylinositol 3- 38.6 1.1E+02 0.0039 32.9 9.6 47 437-490 453-501 (614)
460 2l34_A TYRO protein tyrosine k 35.8 8.8 0.0003 23.8 0.3 25 257-281 6-30 (33)
461 2llm_A Amyloid beta A4 protein 30.9 15 0.00052 24.0 0.0 26 256-281 15-40 (43)
462 1zza_A Stannin, AG8_1; helix, 20.2 97 0.0033 22.6 3.4 19 269-287 23-41 (90)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.8e-52 Score=428.27 Aligned_cols=252 Identities=24% Similarity=0.412 Sum_probs=202.5
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|++. +++.||||+++.... ..++|.+|+++++++ +|||||+++|+|.+.+..++||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEc
Confidence 567999999999999864 367899999976432 356799999999999 999999999999999999999999
Q ss_pred ccCCChhccccCCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEec
Q 006696 416 FASGSLSTLLHGNRG----------AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~D 485 (635)
|++|+|.++++.... ....+++|.+++.|+.|||.||+|||+++ ||||||||+|||+++++.+||+|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcEEEcc
Confidence 999999999976432 12346999999999999999999999988 99999999999999999999999
Q ss_pred cCCCCCCCCC------CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhh
Q 006696 486 FGLTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVR 558 (635)
Q Consensus 486 fGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 558 (635)
||+|+..... ....+|+.|||||++.+..|+.++|||||||++|||+| |+.||...+..+ ....+.
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~------~~~~i~- 274 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------AIDCIT- 274 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH------HHHHHH-
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH------HHHHHH-
Confidence 9999865332 23457889999999999999999999999999999999 899998654221 122221
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
.... .+.+..+...+.+++.+||+.||++||||+||+++|+.+.+..
T Consensus 275 ~g~~----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 275 QGRE----------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HTCC----------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred cCCC----------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 1111 1111223456788899999999999999999999999998753
No 2
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8.8e-52 Score=419.83 Aligned_cols=251 Identities=28% Similarity=0.434 Sum_probs=200.2
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|+++ ..||||+++..... .+.|.+|+++++++ +|||||+++|++. ++..++|||||++|
T Consensus 41 ~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~-~~~~~iVmEy~~gG 116 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred eeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEE-CCeEEEEEEcCCCC
Confidence 578999999999999875 36999998755433 35689999999999 9999999999885 46789999999999
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.++++... ..+++..+..|+.|||.||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 117 sL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 117 SLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp BHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999997543 34999999999999999999999998 999999999999999999999999999865432
Q ss_pred --CCCCCCCcccCcccccC---CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006696 496 --ATPSRSAGYRAPEVIET---RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 496 --~~~~~t~~y~aPE~~~~---~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
....||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+.+.. ..+...+...... +..
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------~~~~~~~~~~~~~----p~~ 259 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYAS----PDL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHTTCCC----CCS
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCCCC----CCc
Confidence 23468999999999964 45899999999999999999999999754321 1222222222111 110
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCC
Q 006696 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 616 (635)
. .....+...+.+++.+||+.||++||||.||+++|+.++..-+
T Consensus 260 ~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 260 S--KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp T--TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred c--cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 0 0112334567788899999999999999999999999886543
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.4e-52 Score=424.60 Aligned_cols=249 Identities=24% Similarity=0.386 Sum_probs=204.4
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||+||+|.+. +++.||||+++.... ..++|.+|+.++.++ +|||||+++|+|.+++..++|||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEECCEEEEEEE
Confidence 467999999999999863 457899999976533 357899999999999 99999999999999999999999
Q ss_pred eccCCChhccccCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEE
Q 006696 415 YFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI 483 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki 483 (635)
||++|+|.++|+..... ....++|..+..|+.|||.||+|||+++ ||||||||+|||+++++.+||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCCEEE
Confidence 99999999999654211 1245899999999999999999999998 999999999999999999999
Q ss_pred eccCCCCCCCCC------CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHH
Q 006696 484 SDFGLTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSV 556 (635)
Q Consensus 484 ~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 556 (635)
+|||+|+..... ....||+.|||||++.++.|+.++|||||||++|||+| |..||.+.+..+ ....
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~------~~~~- 259 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD------VVEM- 259 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH------HHHH-
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH------HHHH-
Confidence 999999765321 23457889999999999999999999999999999999 899998654321 1222
Q ss_pred hhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHh
Q 006696 557 VREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 612 (635)
Q Consensus 557 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 612 (635)
+..+.. .+.++.+...+.++|.+||+.||++||||+||+++|+++.
T Consensus 260 i~~~~~----------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 260 IRNRQV----------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHcCCC----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 212111 1112234456788999999999999999999999998653
No 4
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.6e-52 Score=425.21 Aligned_cols=252 Identities=24% Similarity=0.446 Sum_probs=204.9
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|++. ++..||||+++.... ..++|.+|+++++++ +|||||+++|+|.+++..++||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEEEEEEEc
Confidence 578999999999999864 367899999976432 356799999999999 999999999999999999999999
Q ss_pred ccCCChhccccCCC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccC
Q 006696 416 FASGSLSTLLHGNR--------GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487 (635)
Q Consensus 416 ~~~g~L~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfG 487 (635)
|++|+|.++++... ......++|.++..|+.|||.||+|||+++ ||||||||+|||+++++.+||+|||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCS
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEECCcc
Confidence 99999999997542 122346999999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCC------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhc
Q 006696 488 LTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560 (635)
Q Consensus 488 la~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 560 (635)
+|+...... ...+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+..+ ....+....
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~------~~~~i~~~~ 247 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE------VIECITQGR 247 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHHHHTC
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHHHcCC
Confidence 997543321 2347889999999999999999999999999999999 899998654221 122222111
Q ss_pred cccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 561 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
. .+.+..+...+.+++.+||+.||++|||++|+++.|+.+.+..
T Consensus 248 -~----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 248 -V----------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp -C----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred -C----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 1 1111233456788899999999999999999999999987654
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-51 Score=420.34 Aligned_cols=261 Identities=22% Similarity=0.304 Sum_probs=196.6
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCC----ceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD----EKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~----~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|++. |+.||||++.........++.|+..+.++ +|||||++++++..++ ..|+|||||++
T Consensus 8 ~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 468999999999999985 88999999975432222233444444566 8999999999998764 57999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCceecCCCCCCEEEcCCCCeEEeccCCCCCCC
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG-----GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
|+|.++++.. .++|..+.+++.|++.||+|||+++ .++||||||||+|||++.++++||+|||+|+...
T Consensus 86 gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 86 GSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 9999999742 3999999999999999999999861 3459999999999999999999999999997653
Q ss_pred CCC--------CCCCCCcccCcccccCC------CCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCC--------ChhH
Q 006696 494 VPA--------TPSRSAGYRAPEVIETR------KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV--------DLPR 551 (635)
Q Consensus 494 ~~~--------~~~~t~~y~aPE~~~~~------~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~--------~~~~ 551 (635)
... ...||+.|||||++.+. .++.++|||||||++|||+||..||......+.. ....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 321 23589999999999764 3678999999999999999999887643322110 0111
Q ss_pred HHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 552 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 552 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
.....+.+.. .++.+.......+....+.+++.+||+.||++||||.||++.|+++.+..
T Consensus 240 ~~~~~~~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 240 EMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHhccc----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 1222221111 11111111122356677889999999999999999999999999998653
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=8.4e-51 Score=417.75 Aligned_cols=240 Identities=20% Similarity=0.342 Sum_probs=199.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||+||+|... +++.||||++..... ..+.+.+|+++++++ +|||||++++++.+++..|+|||||++|+
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 157 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 157 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEECCCTTEE
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 357999999999999975 588999999975533 456788999999999 99999999999999999999999999999
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----C
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----A 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~----~ 496 (635)
|.+++... .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+..... .
T Consensus 158 L~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 158 LTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred HHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence 99999642 3999999999999999999999998 999999999999999999999999999865432 3
Q ss_pred CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 497 ~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
+.+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+.. .....+. ...... ....
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~~i~-~~~~~~--------~~~~ 293 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL------KAMKMIR-DNLPPR--------LKNL 293 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHH-HSSCCC--------CSCG
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHH-cCCCCC--------CCcc
Confidence 457999999999999999999999999999999999999999764321 1122221 111100 1111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
......+.+++.+||+.||++|||++|++++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2223456778889999999999999999874
No 7
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.1e-50 Score=420.72 Aligned_cols=257 Identities=26% Similarity=0.371 Sum_probs=207.4
Q ss_pred hhccccccCceEEEEEEecC------CCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeC-CceEEE
Q 006696 342 SAEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-DEKLLV 412 (635)
Q Consensus 342 ~~~~iG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-~~~~lv 412 (635)
..+.||+|+||+||+|.+.. ++.||||+++.... ..+.+.+|++++.++.+|||||+++|+|..+ +..++|
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 36789999999999998653 24699999976533 2457899999999997779999999999765 568999
Q ss_pred eeeccCCChhccccCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCe
Q 006696 413 YDYFASGSLSTLLHGNRG-----------AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 481 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ 481 (635)
||||++|+|.++|+..+. .....+++..+..++.|||.||+|||+++ ||||||||+|||+++++.+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~v 224 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVV 224 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceeeCCCCCE
Confidence 999999999999975432 12345899999999999999999999998 9999999999999999999
Q ss_pred EEeccCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 006696 482 CISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 554 (635)
Q Consensus 482 ki~DfGla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 554 (635)
||+|||+|+...... +..+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+ .+.
T Consensus 225 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~------~~~ 298 (353)
T 4ase_A 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFC 298 (353)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHH
T ss_pred EECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH------HHH
Confidence 999999998764432 2246888999999999999999999999999999998 899998654322 122
Q ss_pred HHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 555 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 555 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
..+.++... ..++....++.+++.+||+.||++|||+.|++++|+.+.+....
T Consensus 299 ~~i~~g~~~----------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~~ 351 (353)
T 4ase_A 299 RRLKEGTRM----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 351 (353)
T ss_dssp HHHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC-
T ss_pred HHHHcCCCC----------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhhC
Confidence 222222211 11122334677888999999999999999999999999876544
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.3e-50 Score=415.20 Aligned_cols=245 Identities=21% Similarity=0.242 Sum_probs=201.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.++||+|+||+||+|+.. +++.||||+++.... ..+|+.+++++ +|||||++++++.+++..|+|||||++|+|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGL-SSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTC-CCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 467999999999999975 478999999976432 24689999999 999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCC-CeEEeccCCCCCCCCC-----
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL-DGCISDFGLTPLMNVP----- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~-~~ki~DfGla~~~~~~----- 495 (635)
.++++.. ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++ .+||+|||+|+.....
T Consensus 138 ~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 138 GQLIKQM-----GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 9999743 34999999999999999999999998 99999999999999998 6999999999865432
Q ss_pred ----CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006696 496 ----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 496 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
....||+.|||||++.+..|+.++|||||||++|||+||+.||.+.+..+.. ..+........ .
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~------~~i~~~~~~~~------~ 277 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC------LKIASEPPPIR------E 277 (336)
T ss_dssp ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH------HHHHHSCCGGG------G
T ss_pred eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH------HHHHcCCCCch------h
Confidence 1236899999999999999999999999999999999999999876544321 11111111000 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
.. +.....+.+++.+||+.||++|||+.|++++|..+.+..
T Consensus 278 ~~---~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 278 IP---PSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp SC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred cC---ccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 01 122345677888999999999999999999998877544
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-50 Score=406.01 Aligned_cols=241 Identities=24% Similarity=0.387 Sum_probs=193.0
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEe----CCceEEEeee
Q 006696 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDY 415 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~ 415 (635)
+.||+|+||+||+|.+. ++..||+|++...... .+.+.+|+++++++ +|||||+++++|.+ ++..|+||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 56999999999999975 4778999999765443 35688999999999 99999999999875 3457999999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC-CCCeEEeccCCCCCCCC
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-DLDGCISDFGLTPLMNV 494 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~-~~~~ki~DfGla~~~~~ 494 (635)
|++|+|.+++++. ..+++..+..++.||+.||+|||+++ ++||||||||+|||++. ++.+||+|||+|+....
T Consensus 111 ~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 111 MTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999743 34999999999999999999999985 56999999999999984 79999999999986543
Q ss_pred C--CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 495 P--ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 495 ~--~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
. .+..||+.|||||++.+ .|+.++|||||||++|||+||+.||.+... ....... +........++
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-----~~~~~~~-i~~~~~~~~~~----- 252 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQIYRR-VTSGVKPASFD----- 252 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHHHHHH-HTTTCCCGGGG-----
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-----HHHHHHH-HHcCCCCCCCC-----
Confidence 3 24569999999999875 699999999999999999999999975321 1111222 21111111111
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.....++.+++.+||+.||++|||++|++++
T Consensus 253 ----~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 ----KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0112346778889999999999999999874
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.6e-50 Score=413.66 Aligned_cols=241 Identities=18% Similarity=0.366 Sum_probs=195.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|+.. +++.||||++...... .+.+.+|+++++++ +|||||++++++.+++..|+|||||++
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yiVmEy~~g 107 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYIVMDYCEG 107 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 468999999999999965 5889999999765443 35688999999999 999999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC--
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
|+|.+++...+ ...+++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+......
T Consensus 108 g~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 108 GDLFKRINAQK---GVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred CcHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 99999996433 234789999999999999999999998 9999999999999999999999999998765432
Q ss_pred --CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006696 497 --TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 497 --~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
+..||+.|||||++.+..|+.++|||||||++|||+||+.||.+.+. ......+....+..
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~i~~~~~~~----------- 244 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM------KNLVLKIISGSFPP----------- 244 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHTCCCC-----------
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHHcCCCCC-----------
Confidence 23589999999999999999999999999999999999999986532 22233333332211
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 575 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
........+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 245 VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 001123456788889999999999999999874
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.8e-49 Score=417.82 Aligned_cols=240 Identities=20% Similarity=0.335 Sum_probs=199.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||.||+|+.. +|+.||||++..... ..+.+.+|+.+++++ +|||||++++++.+++..|+|||||++|+
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~iVmEy~~gG~ 234 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 234 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence 467999999999999975 588999999976533 456789999999999 99999999999999999999999999999
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----C
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----A 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~----~ 496 (635)
|.++++.. .+++..+..++.||+.||+|||+++ ||||||||+||||+.+|.+||+|||+|+..... .
T Consensus 235 L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 305 (423)
T 4fie_A 235 LTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305 (423)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred HHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence 99999632 3999999999999999999999998 999999999999999999999999999865432 2
Q ss_pred CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 497 ~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
+.+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+.. .....+. ..... .+....
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~~i~-~~~~~-----~~~~~~-- 371 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL------KAMKMIR-DNLPP-----RLKNLH-- 371 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHH-HSCCC-----CCSCTT--
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHH-cCCCC-----CCcccc--
Confidence 456899999999999999999999999999999999999999764321 1122221 11110 011111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.....+.+++.+||+.||++|||++|++++
T Consensus 372 -~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 372 -KVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -SSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 223456778889999999999999999884
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.2e-49 Score=400.02 Aligned_cols=238 Identities=18% Similarity=0.311 Sum_probs=199.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|+.. +++.||||++.+.. ...+.+.+|+++++++ +|||||++++++.+++..|+||||++
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 578999999999999965 57899999997542 2356789999999999 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC--
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 116 gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 116 NGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 99999999743 34999999999999999999999998 999999999999999999999999999865422
Q ss_pred ----CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006696 496 ----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 496 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
.+.+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+.. .....+...... +
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~~i~~~~~~---~----- 253 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG------LIFAKIIKLEYD---F----- 253 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCC---C-----
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCCC---C-----
Confidence 2457999999999999999999999999999999999999999765322 222333322211 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.. ....++.+++.+||+.||++|||++|++.+
T Consensus 254 -p~---~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 254 -PE---KFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp -CT---TCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred -Cc---ccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 11 122356778889999999999999997654
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-48 Score=389.79 Aligned_cols=237 Identities=23% Similarity=0.351 Sum_probs=185.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC----CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|... +++.||+|++.+... ....+.+|+++++++ +|||||++++++.+++..|+||||+
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ivmEy~- 95 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECC-
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEeCC-
Confidence 468999999999999964 588999999976532 245689999999999 9999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC--
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 96 ~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 96 GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 67999998643 34999999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCCCCcccCcccccCCCC-CCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 496 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 -~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
.+..||+.|||||++.+..| +.++||||+||++|||+||+.||.+.+. ....+.+...... + .
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~------~~~~~~i~~~~~~---~------p 232 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------PVLFKNISNGVYT---L------P 232 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC---C------C
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcCCCC---C------C
Confidence 34579999999999998886 5799999999999999999999975432 2222222222111 0 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
. .....+.+++.+||+.||++|||++|++++
T Consensus 233 ~---~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 233 K---FLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp T---TSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred C---CCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1 122356778889999999999999999984
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1e-48 Score=396.29 Aligned_cols=237 Identities=26% Similarity=0.381 Sum_probs=189.3
Q ss_pred hccccccCceEEEEEEec----CCCeEEEEEeecccC---CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|+.. .++.||+|+++.... ....+.+|+++++++ +|||||++++++.+++..|+||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ivmEy 107 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKLYLILDF 107 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC-CCTTEECEEEEEEETTEEEEEECC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEEc
Confidence 578999999999999863 367899999975432 234688899999999 999999999999999999999999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC-
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV- 494 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~- 494 (635)
+++|+|.+++.+. ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 108 ~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 108 LRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp CTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 9999999999743 34999999999999999999999998 99999999999999999999999999986532
Q ss_pred ---CCCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006696 495 ---PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 495 ---~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
..+..||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+.. .....+......
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~i~~~~~~--------- 244 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK------ETMTMILKAKLG--------- 244 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC---------
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH------HHHHHHHcCCCC---------
Confidence 23456999999999999999999999999999999999999999865422 222222222110
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNM-----DEVVR 606 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~-----~evl~ 606 (635)
... ....++.+++.+||+.||++|||+ +|+++
T Consensus 245 ~p~---~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 245 MPQ---FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CCT---TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCC---cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 011 123356778889999999999995 56665
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.3e-47 Score=386.81 Aligned_cols=240 Identities=21% Similarity=0.363 Sum_probs=182.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCc-----------
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE----------- 408 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----------- 408 (635)
.+.||+|+||+||+|+.. +++.||||+++.... ..+.+.+|+++++++ +|||||++++++.+.+.
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC----------CE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccccccccCCCc
Confidence 468999999999999965 588999999975432 245688999999999 99999999999976543
Q ss_pred -eEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccC
Q 006696 409 -KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487 (635)
Q Consensus 409 -~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfG 487 (635)
.|+||||+++|+|.+++.... .....++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRC--TIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCC--SGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCC
T ss_pred EEEEEEecCCCCcHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEccCc
Confidence 689999999999999997543 1234567778999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCC----------------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhH
Q 006696 488 LTPLMNVPA----------------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPR 551 (635)
Q Consensus 488 la~~~~~~~----------------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~ 551 (635)
+|+...... +..||+.|||||++.+..|+.++|||||||++|||++ ||.... +...
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~~ 235 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERVR 235 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHH
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHHH
Confidence 998764321 2358999999999999999999999999999999996 775321 0001
Q ss_pred HHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 552 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 552 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
......... + .+..........+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~~~~-----~------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 236 TLTDVRNLK-----F------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHTTC-----C------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHhcCC-----C------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111111000 0 11112333445678999999999999999999873
No 16
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=9.1e-45 Score=378.80 Aligned_cols=187 Identities=23% Similarity=0.459 Sum_probs=163.7
Q ss_pred hccccccCceEEEEEEec----CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|+.+ .++.||+|++... .....+.+|++++..+.+|||||++++++.+.+..|+||||+++
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 468999999999999853 3567999998654 34567889999999997899999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCC-CCeEEeccCCCCCCCCC--
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-LDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~-~~~ki~DfGla~~~~~~-- 495 (635)
|+|.++++ .+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 105 ~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 105 ESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp CCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred ccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 99999984 2899999999999999999999998 9999999999999877 79999999999643221
Q ss_pred ------------------------------CCCCCCCcccCcccccCC-CCCCccchHhHHHHHHHHHhCCCCCCCC
Q 006696 496 ------------------------------ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSP 541 (635)
Q Consensus 496 ------------------------------~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gv~l~elltg~~p~~~~ 541 (635)
.+..||+.|+|||++.+. .|+.++||||+||++|||++|+.||...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 123589999999999775 4899999999999999999999999654
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-44 Score=378.68 Aligned_cols=249 Identities=21% Similarity=0.309 Sum_probs=192.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeC------CceEEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK------DEKLLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lv 412 (635)
.+.||+|+||+||+|... +|+.||||+++..... .+.+.+|+++++++ +|||||++++++... +..|+|
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-CCCCcceEeeeeecccccccCCEEEEE
Confidence 468999999999999975 5889999999765433 34577899999999 999999999997643 578999
Q ss_pred eeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCC
Q 006696 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
||||+ |+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+..
T Consensus 138 mE~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 138 LDLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EeCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeeec
Confidence 99996 6899999743 35999999999999999999999998 999999999999999999999999999865
Q ss_pred CC--------CCCCCCCCcccCcccccCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc-
Q 006696 493 NV--------PATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT- 562 (635)
Q Consensus 493 ~~--------~~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 562 (635)
.. ..+..||+.|||||++.+. .++.++||||+||++|||++|++||.+.+..+. ...+......
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~------l~~I~~~~g~p 282 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ------LQLIMMVLGTP 282 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH------HHHHHHHHCCC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH------HHHHHHhcCCC
Confidence 32 2245789999999998875 468999999999999999999999986543221 1111110000
Q ss_pred -cccc--------hhhhhcc-----cCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 563 -AEVF--------DVELMRF-----QNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 563 -~~~~--------d~~~~~~-----~~~----~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.... ....... ... ......+.+|+.+||..||++|||++|+++|
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 0000000 000 0112456788889999999999999999984
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=8.1e-43 Score=360.50 Aligned_cols=267 Identities=27% Similarity=0.514 Sum_probs=224.8
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 122 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMILIYKYMENGNL 122 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTCCEEEEECCTTCBT
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEEEEcCCCCcH
Confidence 357999999999999988899999999876543 346788999999999 899999999999999999999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-----
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA----- 496 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~----- 496 (635)
.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 123 ~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 123 KRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp GGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred HHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 999975432 2345899999999999999999999998 9999999999999999999999999987543221
Q ss_pred -CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 497 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 -~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...+|+.|+|||++.+..++.++||||||+++|||++|+.||......+......|..............++... ...
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 277 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLA-DKI 277 (321)
T ss_dssp CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCT-TCS
T ss_pred cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhc-ccc
Confidence 223688899999999889999999999999999999999999988777777777776555444444444444332 123
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
..+....+.+++.+||+.||++|||+.|++++|+.+.+..
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 3567788999999999999999999999999999987643
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.3e-44 Score=391.99 Aligned_cols=241 Identities=18% Similarity=0.242 Sum_probs=191.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHH---HHHhhCCCCceeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQME---IVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~---~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.++||+|+||+||+|+.. +++.||+|++.+.. .......+|.. ++..+ +|||||++++++.+.+..|+|||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~~~~lylVmE 272 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSFILD 272 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEECCEEEEEEe
Confidence 468999999999999975 47899999997542 22333444443 44444 89999999999999999999999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|++||+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+....
T Consensus 273 y~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 273 LMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp CCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 99999999999743 34999999999999999999999998 99999999999999999999999999987644
Q ss_pred C--CCCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006696 495 P--ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 495 ~--~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
. .+.+||+.|||||++.. ..|+.++||||+||++|||++|+.||.+....+. .............
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~---~~i~~~i~~~~~~--------- 412 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---HEIDRMTLTMAVE--------- 412 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH---HHHHHHHHHCCCC---------
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHhhcCCCCC---------
Confidence 3 35679999999999974 5799999999999999999999999976543321 1112222211110
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPN-----MDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~~ 607 (635)
... .....+.+++.+||+.||++|++ ++|+++|
T Consensus 413 ~p~---~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 413 LPD---SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp CCT---TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred CCc---cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 011 12235677888999999999998 6888774
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.5e-43 Score=389.81 Aligned_cols=243 Identities=20% Similarity=0.394 Sum_probs=199.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||+||+|... +|+.||+|++..... ..+.+.+|+.+++.+ +|||||++++++.+++..|+|||||++|+
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence 568999999999999975 588999999976533 356788999999999 99999999999999999999999999999
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCC--CCeEEeccCCCCCCCCCC--
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD--LDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~--~~~ki~DfGla~~~~~~~-- 496 (635)
|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+......
T Consensus 241 L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~ 313 (573)
T 3uto_A 241 LFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313 (573)
T ss_dssp HHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred HHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence 999986432 34999999999999999999999998 9999999999999854 899999999998775443
Q ss_pred -CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 497 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 -~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+.. .....+....+... +. ....
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~------~~~~~i~~~~~~~~--~~---~~~~ 382 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD------ETLRNVKSCDWNMD--DS---AFSG 382 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHTTCCCCC--SG---GGTT
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHHhCCCCCC--cc---cccC
Confidence 346899999999999999999999999999999999999999865422 12222222221100 00 1111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
+ ...+.+|+.+||+.||++|||+.|+++|
T Consensus 383 ~---s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 383 I---SEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp S---CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred C---CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2 2356678889999999999999999874
No 21
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=7e-43 Score=361.13 Aligned_cols=257 Identities=24% Similarity=0.356 Sum_probs=202.9
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCc----eEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE----KLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----~~lv~e~~~~ 418 (635)
.++||+|+||+||+|+.. ++.||||++..........++|+.++.++ +||||+++++++..... .++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 578999999999999976 78999999976544445566788888888 89999999999987553 6999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc----------CCCCceecCCCCCCEEEcCCCCeEEeccCC
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM----------GGPKFTHGNIKASNVLINQDLDGCISDFGL 488 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------~~~~ivHrDlk~~NIll~~~~~~ki~DfGl 488 (635)
|+|.++++.. .+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+
T Consensus 107 g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 107 GSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEccCCc
Confidence 9999999642 399999999999999999999998 7 99999999999999999999999999
Q ss_pred CCCCCCCC------CCCCCCcccCcccccCC-----CCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhH------
Q 006696 489 TPLMNVPA------TPSRSAGYRAPEVIETR-----KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPR------ 551 (635)
Q Consensus 489 a~~~~~~~------~~~~t~~y~aPE~~~~~-----~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~------ 551 (635)
++...... ...+|+.|+|||++.+. .++.++|||||||++|||+||+.||.+...........
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 96543322 24578999999999863 45678899999999999999999998765544332211
Q ss_pred ----HHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 552 ----WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 552 ----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
+......... ..... ...........+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 258 ~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 258 SLEDMQEVVVHKKK-RPVLR----DYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp CHHHHHHHHTTSCC-CCCCC----GGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred chhhhhhhhhcccC-CCCcc----ccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1111111111 11111 11111244567889999999999999999999999999998653
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.5e-42 Score=359.28 Aligned_cols=277 Identities=38% Similarity=0.685 Sum_probs=223.3
Q ss_pred CCChHHHHHHh-----hccccccCceEEEEEEecCCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEE
Q 006696 332 NFDLEDLLRAS-----AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYY 404 (635)
Q Consensus 332 ~~~~~~l~~~~-----~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~ 404 (635)
.|+..++.... .+.||+|+||.||+|...+++.||||++..... ....+.+|++++.++ +||||+++++++.
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~ 97 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCM 97 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTC-CCTTBCCCCEEEC
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhc-cCCCccceEEEEe
Confidence 35555554433 468999999999999988899999999976532 234688999999998 8999999999999
Q ss_pred eCCceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEe
Q 006696 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCIS 484 (635)
Q Consensus 405 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~ 484 (635)
..+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+...+.|+||||||+||+++.++.+||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999976543 34459999999999999999999999922239999999999999999999999
Q ss_pred ccCCCCCCCCCC-----CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCC--CCCCCChhHHHHHHh
Q 006696 485 DFGLTPLMNVPA-----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT--RDDMVDLPRWVQSVV 557 (635)
Q Consensus 485 DfGla~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~--~~~~~~~~~~~~~~~ 557 (635)
|||++....... ...+|+.|+|||++.+..++.++||||||+++|||++|+.||.... .........|+....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 999997654322 2347899999999998899999999999999999999999996321 122334555655555
Q ss_pred hhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 006696 558 REEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611 (635)
Q Consensus 558 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 611 (635)
.........+.... ..........+.+++.+||+.||++|||+.|++++|+..
T Consensus 257 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 257 KEKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp SSCCSTTSSCTTCT-TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hchhhhhhcChhhc-cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 55444444444332 233467788899999999999999999999999999864
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4e-42 Score=353.18 Aligned_cols=254 Identities=28% Similarity=0.427 Sum_probs=197.3
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|.. +++.||||++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 57899999999999987 4788999999765443 24688899999999 8999999999999999999999999999
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++.... ....+++..+..++.|++.||+|||+.+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 120 SLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp BHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred cHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 9999997532 1224899999999999999999999985 55999999999999999999999999999765432
Q ss_pred CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 496 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+ ........... ...
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~------~~~~~~~~~~~----------~~~ 260 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ------VVAAVGFKCKR----------LEI 260 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH------HHHHHHHSCCC----------CCC
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhcCCC----------CCC
Confidence 23457899999999999999999999999999999999999997543211 11111111100 011
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.......+.+++.+||+.||++|||++|+++.|+.+......
T Consensus 261 ~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 261 PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 112234577888899999999999999999999999876543
No 24
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=349.73 Aligned_cols=249 Identities=25% Similarity=0.433 Sum_probs=204.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc-CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||+||+|... ++..||+|++.... ...+.+.+|++++.++ +||||+++++++.+++..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 578999999999999975 47889999886532 2356788999999999 89999999999999999999999999999
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC----
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA---- 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~---- 496 (635)
|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 94 L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 94 LRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp HHHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred HHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999997532 34999999999999999999999998 9999999999999999999999999997653321
Q ss_pred --------------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCC---ChhHHHHHHhhh
Q 006696 497 --------------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV---DLPRWVQSVVRE 559 (635)
Q Consensus 497 --------------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~ 559 (635)
...||+.|+|||++.+..++.++||||||+++|||++|..||......... ..........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-- 244 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYC-- 244 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTC--
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccC--
Confidence 335788999999999999999999999999999999999998764432221 1111111000
Q ss_pred ccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 560 EWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 560 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.......+.+++.+||+.||++|||+.|+++.|+.++.....
T Consensus 245 ----------------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 245 ----------------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp ----------------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 011223567888899999999999999999999999876543
No 25
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.6e-41 Score=340.05 Aligned_cols=247 Identities=25% Similarity=0.431 Sum_probs=207.6
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||.||+|...+++.||+|++.......+++.+|++++.++ +||||+++++++.+++..++||||+++|+|.
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 468999999999999998889999999988777788899999999999 8999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC-----CC
Q 006696 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-----~~ 497 (635)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 94 ~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 94 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp HHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHHhcC----cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9997533 34899999999999999999999998 999999999999999999999999999765432 23
Q ss_pred CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... ......... .. ....
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~------~~~~~~~~~-~~----------~~~~ 229 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTG-FR----------LYKP 229 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTT-CC----------CCCC
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH------HHHHHHhcC-cc----------CCCC
Confidence 345678999999998999999999999999999999 99999754321 111111111 10 0001
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
......+.+++.+||+.+|++|||++|++++|+++.+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 11234577888899999999999999999999999865
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.4e-41 Score=358.00 Aligned_cols=255 Identities=25% Similarity=0.410 Sum_probs=205.1
Q ss_pred hccccccCceEEEEEEec--------CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEE
Q 006696 343 AEVLGKGSYGTAYKAVLE--------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
.+.||+|+||.||+|... ++..||||+++.... ..+.+.+|++++.++.+||||+++++++...+..++|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 578999999999999863 244699999976533 2356889999999998899999999999999999999
Q ss_pred eeeccCCChhccccCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCe
Q 006696 413 YDYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 481 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ 481 (635)
|||+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+
T Consensus 166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~ 242 (370)
T 2psq_A 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVM 242 (370)
T ss_dssp EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCE
T ss_pred EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEECCCCCE
Confidence 9999999999999754321 1235899999999999999999999998 9999999999999999999
Q ss_pred EEeccCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 006696 482 CISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 554 (635)
Q Consensus 482 ki~DfGla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 554 (635)
||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||......+. ..
T Consensus 243 kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~------~~ 316 (370)
T 2psq_A 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------FK 316 (370)
T ss_dssp EECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH------HH
T ss_pred EEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH------HH
Confidence 999999997554322 1234678999999999999999999999999999999 9999986543221 11
Q ss_pred HHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 555 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 555 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.+...... .........+.+++.+||+.||++|||+.|+++.|+.+.....+
T Consensus 317 -~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~ 368 (370)
T 2psq_A 317 -LLKEGHRM----------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368 (370)
T ss_dssp -HHHTTCCC----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred -HHhcCCCC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 11111110 11112334677888899999999999999999999999875543
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.1e-41 Score=345.86 Aligned_cols=240 Identities=22% Similarity=0.344 Sum_probs=198.0
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCC
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||+||+|.. .+++.||+|++..... ..+.+.+|+.+++++ +||||+++++++...+..++||||+++|+
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGS 103 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCEEEEEEECCCCCC
Confidence 46799999999999995 4688999999975543 466788999999998 99999999999999999999999999999
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----C
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----A 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~----~ 496 (635)
|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 104 L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 104 LTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred HHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 99999642 3899999999999999999999998 999999999999999999999999998765432 2
Q ss_pred CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 497 ~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||...... ............ .....
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~~~~~~~---------~~~~~ 239 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIATNGTP---------ELQNP 239 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHHCSC---------CCSCG
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCC---------CCCCc
Confidence 345789999999999999999999999999999999999999754321 111111111111 01111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
......+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 2233457788889999999999999999874
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=349.71 Aligned_cols=253 Identities=28% Similarity=0.463 Sum_probs=202.4
Q ss_pred hccccccCceEEEEEEec----CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeec
Q 006696 343 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+|+||.||+|.+. .+..||||+++.... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGGCCEEEEECC
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCccEEEeeCC
Confidence 578999999999999974 344599999976432 245788999999999 8999999999999999999999999
Q ss_pred cCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC
Q 006696 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 496 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~ 496 (635)
++|+|.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 133 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 133 ENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred CCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999996432 34999999999999999999999998 9999999999999999999999999997664332
Q ss_pred C-------CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006696 497 T-------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 497 ~-------~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
. ..+|+.|+|||++.+..++.++|||||||++|||++ |..||......+ ...... ....
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~-~~~~------ 272 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD------VISSVE-EGYR------ 272 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH------HHHHHH-TTCC------
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHH-cCCC------
Confidence 1 224567999999998899999999999999999999 999997543221 111111 1110
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCCCCC
Q 006696 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRP 620 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 620 (635)
.+........+.+++.+||+.||++|||+.|+++.|+.+.+....-+.
T Consensus 273 ----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~~~ 320 (325)
T 3kul_A 273 ----LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRA 320 (325)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC----
T ss_pred ----CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcccccc
Confidence 111122334677888999999999999999999999999977655443
No 29
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.9e-41 Score=339.45 Aligned_cols=248 Identities=22% Similarity=0.351 Sum_probs=204.8
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||.||++...++..||+|+++......+++.+|++++.++ +||||+++++++.+.+..++||||+++|+|.
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcC-CCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 478999999999999999888999999988777788899999999999 8999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC-----CC
Q 006696 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-----~~ 497 (635)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 108 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 108 NYLREMR----HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp HHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred HHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 9997533 24899999999999999999999998 999999999999999999999999999765432 23
Q ss_pred CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+. .... ....
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~------~~~~~~~-~~~~----------~~~~ 243 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS------ETAEHIA-QGLR----------LYRP 243 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHH-TTCC----------CCCC
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh------HHHHHHh-cccC----------CCCC
Confidence 345678999999998899999999999999999998 99999754321 1111111 1100 0001
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
......+.+++.+||+.+|++|||++|++++|+++.+.+
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 112245778888999999999999999999999998654
No 30
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.3e-41 Score=338.13 Aligned_cols=248 Identities=26% Similarity=0.417 Sum_probs=205.5
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||.||+|...++..||+|+++......+++.+|++++.++ +||||+++++++...+..++||||+++++|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 468999999999999998888999999988777788899999999999 8999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-----C
Q 006696 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-----T 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-----~ 497 (635)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 92 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 92 NYLRSHG----KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp HHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred HHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 9997532 34899999999999999999999998 9999999999999999999999999987654332 2
Q ss_pred CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ............ . ..
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~---~--------~~ 227 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS------EVVLKVSQGHRL---Y--------RP 227 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHTTCCC---C--------CC
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH------HHHHHHHcCCCC---C--------CC
Confidence 334667999999999899999999999999999999 99999754321 111111111100 0 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
......+.+++.+||+.+|++|||+.|++++|+.+++..
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 112235778888999999999999999999999887643
No 31
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4e-40 Score=337.97 Aligned_cols=270 Identities=29% Similarity=0.530 Sum_probs=214.2
Q ss_pred CCChHHHHHHh-----------hccccccCceEEEEEEecCCCeEEEEEeecccC-----CHHHHHHHHHHHHhhCCCCc
Q 006696 332 NFDLEDLLRAS-----------AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-----GKRDFEQQMEIVGRVGQHPN 395 (635)
Q Consensus 332 ~~~~~~l~~~~-----------~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~e~~~l~~l~~h~n 395 (635)
.|...++...+ .+.||+|+||.||+|.. +++.||+|++..... ..+.+.+|+.++.++ +|||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ 91 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHEN 91 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTT
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCC
Confidence 46677776665 26799999999999987 478999999875421 246788999999999 9999
Q ss_pred eeceeEEEEeCCceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE
Q 006696 396 VVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI 475 (635)
Q Consensus 396 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll 475 (635)
|+++++++...+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili 166 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL 166 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence 99999999999999999999999999999875432 345899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeccCCCCCCCCC------CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 006696 476 NQDLDGCISDFGLTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549 (635)
Q Consensus 476 ~~~~~~ki~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~ 549 (635)
++++.+||+|||++...... ....+++.|+|||.+.+ .++.++||||||+++|||++|..||......+...
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~- 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL- 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT-
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH-
Confidence 99999999999998765432 22357889999999875 58899999999999999999999998765443322
Q ss_pred hHHHHHHhhhcc-ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhh
Q 006696 550 PRWVQSVVREEW-TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613 (635)
Q Consensus 550 ~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 613 (635)
.+......... ....++..+ ..........+.+++.+||+.+|++|||++|++++|+++..
T Consensus 245 -~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 -DIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp -HHHHHHHTTSCCHHHHSCSSC--SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred -HHHHHhhhhhhhhhhhccccc--cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 22222111110 111111111 11234566788999999999999999999999999999864
No 32
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.8e-40 Score=344.35 Aligned_cols=253 Identities=15% Similarity=0.177 Sum_probs=204.1
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||+||+|.. .+++.||||++.... ..+.+.+|++++.++.+||||+++++++...+..++||||+ +++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 46899999999999996 467889999987543 34568899999999989999999999999999999999999 9999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCC-----eEEeccCCCCCCCCC-
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-----GCISDFGLTPLMNVP- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~-----~ki~DfGla~~~~~~- 495 (635)
.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 92 EDLFDLCD----RTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred HHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 99997532 34999999999999999999999998 999999999999998887 999999999764322
Q ss_pred ----------CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 006696 496 ----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 565 (635)
Q Consensus 496 ----------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (635)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .....+........
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~---~~~~~i~~~~~~~~- 240 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK---ERYQKIGDTKRATP- 240 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHH---HHHHHHHHHHHHSC-
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHH---HHHHHHHhhhccCC-
Confidence 2345789999999999999999999999999999999999999876543322 22222111110000
Q ss_pred chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 566 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 566 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
.+ .. ... .. .+.+++.+||+.||.+||+++++.+.|+++.+..
T Consensus 241 ~~-~~--~~~---~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 241 IE-VL--CEN---FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp HH-HH--TTT---CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HH-HH--hcc---Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 00 00 001 12 7788889999999999999999999999988654
No 33
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.9e-40 Score=342.68 Aligned_cols=239 Identities=21% Similarity=0.312 Sum_probs=197.1
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
+.||+|+||.||+|... +++.||||++..... ..+.+.+|+.++.++ +||||+++++++...+..++||||+++|+|
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 129 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence 47999999999999976 689999999976543 456788999999999 999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----CC
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----AT 497 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~----~~ 497 (635)
.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 130 ~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 200 (321)
T 2c30_A 130 TDIVSQ------VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 200 (321)
T ss_dssp HHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccccc
Confidence 999863 24899999999999999999999998 999999999999999999999999998765432 23
Q ss_pred CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChH
Q 006696 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 577 (635)
Q Consensus 498 ~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 577 (635)
..+|+.|+|||++.+..++.++||||||+++|||++|+.||...... ....... ....... ....
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~------~~~~~~~-~~~~~~~--------~~~~ 265 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV------QAMKRLR-DSPPPKL--------KNSH 265 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHH-HSSCCCC--------TTGG
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHh-cCCCCCc--------Cccc
Confidence 46889999999999999999999999999999999999999754321 1111111 1111000 0011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 578 EEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 578 ~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.....+.+++.+||+.||++|||++|++++
T Consensus 266 ~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 266 KVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 123456788889999999999999999885
No 34
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5.6e-41 Score=343.08 Aligned_cols=251 Identities=23% Similarity=0.399 Sum_probs=194.3
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhh-CCCCceeceeEEEEeC----CceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSK----DEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~----~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|.. +++.||||++... ....+.+|.+++... .+||||+++++++... ...++||||++
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 89 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCT
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhcc
Confidence 46899999999999998 5889999998653 345566677777663 2899999999997653 35789999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCceecCCCCCCEEEcCCCCeEEeccCCC
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--------SMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 489 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla 489 (635)
+|+|.++++. ..+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 90 ~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 90 MGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp TCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 9999999953 24999999999999999999999 776 999999999999999999999999998
Q ss_pred CCCCCC--------CCCCCCCcccCcccccCC------CCCCccchHhHHHHHHHHHhC----------CCCCCCCCCCC
Q 006696 490 PLMNVP--------ATPSRSAGYRAPEVIETR------KHSHKSDVYSFGVLLLEMLTG----------KAPLQSPTRDD 545 (635)
Q Consensus 490 ~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~DvwS~Gv~l~elltg----------~~p~~~~~~~~ 545 (635)
+..... ....+|+.|+|||++.+. .++.++|||||||++|||++| +.||......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 654322 223688999999999876 455799999999999999999 78886544332
Q ss_pred CCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 006696 546 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611 (635)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 611 (635)
. ... ................ ...........+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 241 ~-~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 P-SFE-DMRKVVCVDQQRPNIP----NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp C-CHH-HHHHHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred c-chh-hhhHHHhccCCCCCCC----hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 2 111 1111111111111111 1111234567788999999999999999999999999976
No 35
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=350.52 Aligned_cols=261 Identities=25% Similarity=0.370 Sum_probs=208.3
Q ss_pred hccccccCceEEEEEEec--------CCCeEEEEEeecccCC--HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEE
Q 006696 343 AEVLGKGSYGTAYKAVLE--------ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
.+.||+|+||+||+|... .+..||||+++..... ...+.+|++++.++.+||||+++++++..++..++|
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 153 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEE
Confidence 578999999999999863 2346999999765332 356889999999998999999999999999999999
Q ss_pred eeeccCCChhccccCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCe
Q 006696 413 YDYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 481 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ 481 (635)
|||+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+
T Consensus 154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 230 (382)
T 3tt0_A 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVM 230 (382)
T ss_dssp EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCE
T ss_pred EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEEcCCCcE
Confidence 9999999999999754321 1245999999999999999999999998 9999999999999999999
Q ss_pred EEeccCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 006696 482 CISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 554 (635)
Q Consensus 482 ki~DfGla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 554 (635)
||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||...... ....
T Consensus 231 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~------~~~~ 304 (382)
T 3tt0_A 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE------ELFK 304 (382)
T ss_dssp EECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHH
T ss_pred EEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHH
Confidence 999999998664322 2235677999999999999999999999999999999 99999754321 1111
Q ss_pred HHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCc
Q 006696 555 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSE 623 (635)
Q Consensus 555 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~ 623 (635)
. +....... ........+.+++.+||+.||++|||++|++++|+.+......++....
T Consensus 305 ~-~~~~~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~ 362 (382)
T 3tt0_A 305 L-LKEGHRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYY 362 (382)
T ss_dssp H-HHTTCCCC----------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC----
T ss_pred H-HHcCCCCC----------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 1 11111110 0112234677888899999999999999999999999988777665543
No 36
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.7e-40 Score=343.54 Aligned_cols=238 Identities=19% Similarity=0.318 Sum_probs=197.3
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|.. .+++.||||++...... .+.+.+|+++++.+ +||||+++++++...+..++||||+++
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~ 98 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASG 98 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEEEECCCC
Confidence 46899999999999997 56889999999776443 34577899999999 899999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC---
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 99 GEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 9999998643 24899999999999999999999998 999999999999999999999999999765433
Q ss_pred CCCCCCCcccCcccccCCCCC-CccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006696 496 ATPSRSAGYRAPEVIETRKHS-HKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 496 ~~~~~t~~y~aPE~~~~~~~~-~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
....+|+.|+|||++.+..+. .++||||+||++|||++|+.||.+.+. ......+.......
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~i~~~~~~~----------- 233 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------KELRERVLRGKYRI----------- 233 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCC-----------
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCC-----------
Confidence 245689999999999888875 789999999999999999999976432 22222222221110
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 575 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
+......+.+++.+||+.||.+|||++|++++
T Consensus 234 -p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 -PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01122356788889999999999999999885
No 37
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=7.8e-41 Score=362.16 Aligned_cols=247 Identities=24% Similarity=0.448 Sum_probs=205.5
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||+||+|.+.++..||||+++......+.+.+|+.+++++ +||||+++++++. .+..++||||+++|+|.
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhC-CCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 578999999999999998888999999987766788999999999999 9999999999986 67889999999999999
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC-----CC
Q 006696 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-----~~ 497 (635)
++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 271 ~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 271 DFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp HHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred HHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 9997532 124889999999999999999999998 999999999999999999999999999875432 22
Q ss_pred CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..++..|+|||++....++.++|||||||++|||+| |+.||.+....+ ....+ ..... .+..
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i-~~~~~----------~~~~ 407 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE------VIRAL-ERGYR----------MPRP 407 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHH-HHTCC----------CCCC
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHH-HcCCC----------CCCC
Confidence 335678999999998899999999999999999999 999997643221 11111 11111 1111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
......+.+++.+||+.||++|||++++++.|+.+...
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 22345678888999999999999999999999988654
No 38
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2e-40 Score=358.44 Aligned_cols=247 Identities=25% Similarity=0.410 Sum_probs=203.4
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCC-ceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD-EKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|+.+++++ +||||+++++++...+ ..++||||+++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 578999999999999986 6799999997654 457899999999999 9999999999988765 78999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-CCCC
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSR 500 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-~~~~ 500 (635)
.++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...+
T Consensus 275 ~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 348 (450)
T 1k9a_A 275 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 348 (450)
T ss_dssp HHHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC------CC
T ss_pred HHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCC
Confidence 99997532 234789999999999999999999998 9999999999999999999999999997654322 2346
Q ss_pred CCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHH
Q 006696 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEE 579 (635)
Q Consensus 501 t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 579 (635)
+..|+|||++.+..++.++|||||||++|||++ |+.||......+. .. . +..... .......
T Consensus 349 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~---~~---~-i~~~~~----------~~~p~~~ 411 (450)
T 1k9a_A 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---VP---R-VEKGYK----------MDAPDGC 411 (450)
T ss_dssp CTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH---HH---H-HHTTCC----------CCCCTTC
T ss_pred CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HH---H-HHcCCC----------CCCCCcC
Confidence 778999999999999999999999999999998 9999986554331 11 1 111111 1111223
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 580 MVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 580 ~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
...+.++|.+||+.||++|||+.|+++.|+.+....
T Consensus 412 ~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 412 PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 456778889999999999999999999999998653
No 39
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.4e-40 Score=335.98 Aligned_cols=255 Identities=17% Similarity=0.194 Sum_probs=204.5
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|.. .+++.||+|++.... ..+.+.+|+.++.++.+|+|++++++++......++||||+ +++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 92 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 92 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCH
Confidence 46799999999999996 568889999986543 34568899999999988999999999999999999999999 9999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCC-----eEEeccCCCCCCCCC-
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-----GCISDFGLTPLMNVP- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~-----~ki~DfGla~~~~~~- 495 (635)
.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 93 ~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 93 EDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred HHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 99997532 34999999999999999999999998 999999999999987776 999999999765432
Q ss_pred ----------CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 006696 496 ----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 565 (635)
Q Consensus 496 ----------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (635)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||........... .............
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~ 242 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQK---YERIGEKKQSTPL 242 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHH---HHHHHHHHHHSCH
T ss_pred ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHH---HHHHHhhccCccH
Confidence 233578899999999999999999999999999999999999987543322111 1111111100000
Q ss_pred chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCC
Q 006696 566 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 566 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 616 (635)
... . ......+.+++.+||+.||++||+++++++.|+++.+...
T Consensus 243 --~~~--~---~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 243 --REL--C---AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp --HHH--T---TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --HHH--H---hhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 000 0 1123467788889999999999999999999999987654
No 40
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.2e-41 Score=357.59 Aligned_cols=247 Identities=25% Similarity=0.387 Sum_probs=201.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||+|.+. +++.||||+++.... ....+.+|+++++++ +||||+++++++...+..++||||+++|
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 578999999999999986 688999999875432 134678899999999 9999999999999999999999999999
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC---
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA--- 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~--- 496 (635)
+|.++++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 198 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 198 DFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp BHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 9999997432 24899999999999999999999998 9999999999999999999999999987643321
Q ss_pred ---CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 497 ---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 497 ---~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
...++..|+|||.+.+..++.++|||||||++|||++ |..||......+ ....+.....
T Consensus 271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~-------~~~~~~~~~~---------- 333 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-------TREFVEKGGR---------- 333 (377)
T ss_dssp CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH-------HHHHHHTTCC----------
T ss_pred cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCCC----------
Confidence 1123557999999998899999999999999999998 999997643211 1111111111
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
.+........+.+++.+||+.||++|||++++++.|+++...
T Consensus 334 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 334 LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 111112334677888999999999999999999999999764
No 41
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1e-40 Score=364.78 Aligned_cols=247 Identities=26% Similarity=0.408 Sum_probs=206.6
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|.+.. +..||||+++......+.+.+|+.++.++ +||||+++++++...+..++||||+++|+|
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 5789999999999999875 77899999987766778899999999999 999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-----
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA----- 496 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~----- 496 (635)
.++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 304 ~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 304 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp HHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred HHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 99997532 245899999999999999999999998 9999999999999999999999999998764322
Q ss_pred CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 ~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...++..|+|||++.+..++.++|||||||++|||++ |..||......+ +.. .+..... ...
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~----~~~~~~~----------~~~ 440 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYE----LLEKDYR----------MER 440 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH----HHHTTCC----------CCC
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHHcCCC----------CCC
Confidence 2234567999999998899999999999999999999 999998654322 111 1111111 111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhh
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 613 (635)
.......+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 441 ~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 12233567788899999999999999999999998764
No 42
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-40 Score=342.30 Aligned_cols=256 Identities=24% Similarity=0.385 Sum_probs=197.5
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhh-CCCCceeceeEEEEeC----CceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSK----DEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~----~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|+.. ++.||||++.... ...+..|.+++... .+||||+++++++... ...++||||++
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 118 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHE 118 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCT
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccC
Confidence 578999999999999986 8899999986543 34455566655543 2899999999999887 67899999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--------CCCCceecCCCCCCEEEcCCCCeEEeccCCC
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM--------GGPKFTHGNIKASNVLINQDLDGCISDFGLT 489 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~--------~~~~ivHrDlk~~NIll~~~~~~ki~DfGla 489 (635)
+|+|.++++.. .+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||++
T Consensus 119 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 119 NGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC---EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---EEecccchHHEEECCCCCEEEEeCCCc
Confidence 99999999642 389999999999999999999998 6 999999999999999999999999999
Q ss_pred CCCCCCC--------CCCCCCcccCcccccCCCCCCc------cchHhHHHHHHHHHhC----------CCCCCCCCCCC
Q 006696 490 PLMNVPA--------TPSRSAGYRAPEVIETRKHSHK------SDVYSFGVLLLEMLTG----------KAPLQSPTRDD 545 (635)
Q Consensus 490 ~~~~~~~--------~~~~t~~y~aPE~~~~~~~~~~------~DvwS~Gv~l~elltg----------~~p~~~~~~~~ 545 (635)
....... ...+|+.|+|||++.+..++.+ +|||||||++|||+|| ..||......+
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 6553322 3357899999999988776665 9999999999999999 55665433222
Q ss_pred CCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCC
Q 006696 546 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 616 (635)
. .. ...............+. ...........+.+++.+||+.||++|||+.|++++|+.+.+...
T Consensus 270 ~-~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 270 P-SY-EDMREIVCIKKLRPSFP----NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp C-CH-HHHHHHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred C-ch-hhhHHHHhhhccCcccc----ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 1 11 11111111111111111 111123566778999999999999999999999999999987653
No 43
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.5e-40 Score=350.37 Aligned_cols=247 Identities=27% Similarity=0.507 Sum_probs=193.1
Q ss_pred hccccccCceEEEEEEec----CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeec
Q 006696 343 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+|+||.||+|+.. ++..||||+++.... ..+.+.+|+.++.++ +||||+++++++...+..++||||+
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCceEEEEeCC
Confidence 478999999999999865 467799999976432 245788999999999 9999999999999999999999999
Q ss_pred cCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC
Q 006696 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 496 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~ 496 (635)
++|+|.++++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 129 ENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999997532 34999999999999999999999998 9999999999999999999999999998764322
Q ss_pred C-------CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006696 497 T-------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 497 ~-------~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
. ..++..|+|||++.+..++.++|||||||++|||++ |+.||......+ .... +.....
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~------~~~~-i~~~~~------ 268 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKA-VDEGYR------ 268 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH------HHHH-HHTTEE------
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHH-HHcCCC------
Confidence 1 123567999999999999999999999999999998 999997543211 1111 111111
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
.+........+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 269 ----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 269 ----LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp ----CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 111122345678889999999999999999999999999764
No 44
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=344.58 Aligned_cols=240 Identities=20% Similarity=0.307 Sum_probs=192.5
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|.. .+++.||||++..... ....+.+|+++++++ +||||+++++++...+..++||||+++|
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~gg 93 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL-RHQHICQLYHVLETANKIFMVLEYCPGG 93 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 46899999999999996 4688999999976543 345688999999999 8999999999999999999999999999
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 94 ~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 94 ELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp BHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred CHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 999998642 24899999999999999999999998 999999999999999999999999998765432
Q ss_pred -CCCCCCCcccCcccccCCCC-CCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 496 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 -~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
.+..||+.|+|||++.+..+ +.++||||+||++|||++|..||...+ .......+......
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~----------- 228 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN------VMALYKKIMRGKYD----------- 228 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC-----------
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCC-----------
Confidence 23457899999999988875 899999999999999999999997543 22222222222111
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 609 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 609 (635)
........+.+++.+||+.||++|||++|++++-.
T Consensus 229 -~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 229 -VPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred -CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcc
Confidence 00112234667888999999999999999998644
No 45
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=6.1e-40 Score=346.89 Aligned_cols=245 Identities=19% Similarity=0.299 Sum_probs=195.2
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCC----HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.++||+|+||.||+|+... ++.||+|++++.... .+.+..|..++.++.+||||+++++++.+.+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 5789999999999999764 678999999865432 24578899999888799999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC---
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~--- 494 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 137 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 137 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence 99999998743 24999999999999999999999998 99999999999999999999999999976322
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCC--CChhHHHHHHhhhccccccchhhhh
Q 006696 495 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM--VDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 495 -~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
..+..||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ..........+.....
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------- 279 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------- 279 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC---------
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc---------
Confidence 2345689999999999999999999999999999999999999975432221 1111112111111110
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNM------DEVVR 606 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~------~evl~ 606 (635)
..+......+.+++.+||+.||++||++ +|+++
T Consensus 280 --~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 280 --RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred --CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 0111123456788889999999999996 56666
No 46
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.6e-40 Score=341.57 Aligned_cols=253 Identities=26% Similarity=0.371 Sum_probs=194.5
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|...+++.||+|++...... ...+.+|+++++++ +||||+++++++.+++..++||||+++
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~- 103 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSERCLTLVFEFMEK- 103 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSSCEEEEEECCSE-
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCCEEEEEEcCCCC-
Confidence 4679999999999999988999999999755332 35688999999999 999999999999999999999999985
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 104 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 104 DLKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp EHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred CHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 8888876432 34899999999999999999999998 999999999999999999999999999765432
Q ss_pred CCCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc---chh---
Q 006696 496 ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV---FDV--- 568 (635)
Q Consensus 496 ~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~--- 568 (635)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. ................ .+.
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ---LPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH---HHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHHCCCChHHhhhhhccchh
Confidence 23457889999999876 5689999999999999999999999987654332 1111111111100000 000
Q ss_pred ---hhh--ccc----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 569 ---ELM--RFQ----NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 569 ---~~~--~~~----~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
... ... ..+....++.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000 000 001123467788999999999999999999873
No 47
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.4e-40 Score=329.74 Aligned_cols=247 Identities=25% Similarity=0.417 Sum_probs=206.7
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||.||+|...+++.||+|++.......+.+.+|++++.++ +||||+++++++..++..++||||+++++|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 467999999999999998888999999988777778899999999999 8999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC-----CC
Q 006696 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-----~~ 497 (635)
+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 92 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 92 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp HHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHhhCc----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 9997532 34899999999999999999999998 999999999999999999999999998765332 23
Q ss_pred CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.. .... ...
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~i~~-~~~~----------~~~ 227 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDIST-GFRL----------YKP 227 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHT-TCCC----------CCC
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH------HHHHHHhc-CCcC----------CCC
Confidence 345678999999998899999999999999999999 89999754321 11222111 1100 000
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
......+.+++.+||+.||++|||+.|++++|+++.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11234577888899999999999999999999999864
No 48
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=9.7e-40 Score=342.12 Aligned_cols=241 Identities=21% Similarity=0.358 Sum_probs=197.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-------CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||.||+|... +++.||+|+++.... ..+.+.+|+.++.++ +||||+++++++.+.+..++|||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~e 95 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYENRTDVVLILE 95 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEEeCCEEEEEEE
Confidence 468999999999999976 578899999976532 246789999999999 89999999999999999999999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCC----CeEEeccCCCC
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLTP 490 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~----~~ki~DfGla~ 490 (635)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++ .+||+|||++.
T Consensus 96 ~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 96 LVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp CCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred cCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 9999999999964 235999999999999999999999998 99999999999998877 79999999997
Q ss_pred CCCCC---CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006696 491 LMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 491 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
..... ....||+.|+|||++.+..++.++|||||||++|||++|..||.+.+.. .....+....+. ++
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~------~~~~~i~~~~~~---~~ 238 (361)
T 2yab_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANITAVSYD---FD 238 (361)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHTTCCC---CC
T ss_pred EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcCCC---CC
Confidence 66543 2346899999999999999999999999999999999999999764321 112222211110 11
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006696 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 606 (635)
... .. .....+.+++.+||..||++|||+.|+++
T Consensus 239 ~~~--~~---~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 239 EEF--FS---QTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHH--HT---TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chh--cc---CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 100 01 12245677888999999999999999986
No 49
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.4e-40 Score=359.81 Aligned_cols=248 Identities=25% Similarity=0.433 Sum_probs=202.2
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||.||+|.+.++..||||+++......+.+.+|+++++++ +||||+++++++.. +..++||||+++|+|.
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 568999999999999998888899999987666778899999999999 99999999999865 7789999999999999
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-----C
Q 006696 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-----T 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-----~ 497 (635)
+++.... ...+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++...... .
T Consensus 267 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 267 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 9997432 134899999999999999999999998 9999999999999999999999999998764322 2
Q ss_pred CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..++..|+|||++.+..++.++|||||||++|||++ |+.||.+....+ .... +..... .+..
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~------~~~~-i~~~~~----------~~~~ 403 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQ-VERGYR----------MPCP 403 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHH-HHTTCC----------CCCC
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHH-HHcCCC----------CCCC
Confidence 234677999999999999999999999999999999 999997643211 1111 111111 1111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
......+.+++.+||+.||++|||++++++.|+.+....
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 223456778889999999999999999999999887544
No 50
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=7.3e-41 Score=351.30 Aligned_cols=254 Identities=27% Similarity=0.374 Sum_probs=202.7
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCc-eEEEe
Q 006696 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-KLLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-~~lv~ 413 (635)
.+.||+|+||.||+|.+. +++.||||+++.... ..+.+.+|++++.++.+||||+++++++...+. .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 578999999999999842 346899999976433 235688999999999889999999999987654 89999
Q ss_pred eeccCCChhccccCCCCCC-------------------------------------------------------------
Q 006696 414 DYFASGSLSTLLHGNRGAG------------------------------------------------------------- 432 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~------------------------------------------------------------- 432 (635)
||+++|+|.++++......
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 9999999999997643210
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC------CCCCCCcccC
Q 006696 433 RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA------TPSRSAGYRA 506 (635)
Q Consensus 433 ~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~------~~~~t~~y~a 506 (635)
...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....... ...+|+.|+|
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a 263 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 263 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCC
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEC
Confidence 122899999999999999999999998 9999999999999999999999999998654322 2335778999
Q ss_pred cccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHH
Q 006696 507 PEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQ 585 (635)
Q Consensus 507 PE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~ 585 (635)
||++.+..++.++|||||||++|||+| |..||......+ ............. ........+.+
T Consensus 264 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~~~~~----------~~~~~~~~l~~ 327 (359)
T 3vhe_A 264 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMR----------APDYTTPEMYQ 327 (359)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHTCCCC----------CCTTCCHHHHH
T ss_pred hhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHHcCCCCC----------CCCCCCHHHHH
Confidence 999999999999999999999999998 999997654322 1111111111110 01112345778
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 586 IGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 586 li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
++.+||+.||++|||+.|++++|+.+.+..
T Consensus 328 li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 328 TMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 888999999999999999999999998653
No 51
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.6e-40 Score=334.44 Aligned_cols=245 Identities=25% Similarity=0.393 Sum_probs=189.8
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccC-----CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... ++.||||+++.... ..+.+.+|++++..+ +||||+++++++..++..++||||++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCceEEEEEcCC
Confidence 468999999999999976 78899999875432 246788999999999 89999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC--------CCCeEEeccCCC
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ--------DLDGCISDFGLT 489 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~--------~~~~ki~DfGla 489 (635)
+++|.+++.. ..+++..+..++.|++.||+|||+.+..+|+||||||+||+++. ++.+||+|||++
T Consensus 90 ~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 90 GGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp TEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred CCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 9999999853 24899999999999999999999987556899999999999986 778999999999
Q ss_pred CCCCCCC--CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006696 490 PLMNVPA--TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 490 ~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
....... ...+++.|+|||.+.+..++.++||||||+++|||++|+.||...... .............
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~---- 233 (271)
T 3dtc_A 164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL------AVAYGVAMNKLAL---- 233 (271)
T ss_dssp ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHTSCCCC----
T ss_pred cccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHhhhcCCCCC----
Confidence 7654332 345788999999999989999999999999999999999999754311 1111111111110
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 006696 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 611 (635)
.........+.+++.+||+.||++|||+.|++++|+++
T Consensus 234 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 234 ------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11112234677888899999999999999999999854
No 52
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.4e-39 Score=331.86 Aligned_cols=254 Identities=22% Similarity=0.322 Sum_probs=201.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC----HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... .+..||+|++...... .+.+.+|+.++.++ +||||+++++++..++..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 94 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDDCYYLVMEYIE 94 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCCeEEEEEeCCC
Confidence 468999999999999965 5788999998654332 35688899999999 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 95 GPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp SCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 99999999643 34899999999999999999999998 9999999999999999999999999998764322
Q ss_pred ----CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 497 ----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 497 ----~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
...+|+.|+|||.+.+..++.++||||||+++|||++|+.||...... ............ ......
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~~~----~~~~~~ 236 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV------SIAIKHIQDSVP----NVTTDV 236 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH------HHHHHHHSSCCC----CHHHHS
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhhccCC----Ccchhc
Confidence 234789999999999999999999999999999999999999764321 111111111110 000000
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHHhhcCCCC
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRP-NMDEVVRMIEEVRQSDSEN 618 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RP-s~~evl~~L~~~~~~~~~~ 618 (635)
. ......+.+++.+|++.||++|| +++++.+.|+.+.......
T Consensus 237 ~---~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~ 280 (294)
T 4eqm_A 237 R---KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRAN 280 (294)
T ss_dssp C---TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTT
T ss_pred c---cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCC
Confidence 1 11234577888899999999999 8999999999877655443
No 53
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.6e-40 Score=338.96 Aligned_cols=255 Identities=24% Similarity=0.400 Sum_probs=197.4
Q ss_pred hccccccCceEEEEEEe-----cCCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeC--CceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~e 414 (635)
.+.||+|+||+||+|++ .+++.||||++..... ..+.+.+|++++.++ +||||+++++++... ...++|||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCCceEEEEE
Confidence 56899999999999984 2578899999875432 245788999999999 899999999998654 45899999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 94 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp CCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred eCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999997543 24899999999999999999999998 99999999999999999999999999987643
Q ss_pred CC-------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCC--------CCCC-hhHHHHHHhh
Q 006696 495 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD--------DMVD-LPRWVQSVVR 558 (635)
Q Consensus 495 ~~-------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~--------~~~~-~~~~~~~~~~ 558 (635)
.. ...++..|+|||.+.+..++.++||||||+++|||++|..|+...... .... ..........
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence 32 223456699999999999999999999999999999999998643110 0000 0000111111
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
... ..+........+.+++.+||+.||++|||++|+++.|+.+.+..
T Consensus 247 ~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 247 NNG----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ccC----------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 110 11112233456788899999999999999999999999998653
No 54
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.1e-39 Score=336.44 Aligned_cols=238 Identities=21% Similarity=0.276 Sum_probs=196.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|+.. +++.||+|++++.. .....+.+|+.++..+ +||||+++++++...+..++||||++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~E~~~ 88 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYAN 88 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 468999999999999975 58889999997642 2356688899999998 89999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC--
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 89 GGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp TCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 99999998642 24899999999999999999999998 999999999999999999999999999764322
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 496 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 --~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+......
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~~----------- 223 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------ERLFELILMEEIR----------- 223 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC-----------
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH------HHHHHHHHcCCCC-----------
Confidence 234578999999999999999999999999999999999999975432 1222222221110
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~ 607 (635)
........+.+++.+||+.||++|| +++|++++
T Consensus 224 -~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 224 -FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 0011234567788899999999999 89999885
No 55
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-40 Score=340.49 Aligned_cols=244 Identities=20% Similarity=0.316 Sum_probs=199.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|... ++..||+|.+.........+.+|+.++..+ +||||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L 88 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHRNILHLHESFESMEELVMIFEFISGLDI 88 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEEEEECCCCCCBH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEEEEEEEeCCCCCH
Confidence 467999999999999976 467899999876544556788999999999 999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC--CCCeEEeccCCCCCCCCCC---
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ--DLDGCISDFGLTPLMNVPA--- 496 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~--~~~~ki~DfGla~~~~~~~--- 496 (635)
.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||++.......
T Consensus 89 ~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 161 (321)
T 1tki_A 89 FERINTSA----FELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161 (321)
T ss_dssp HHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccc
Confidence 99996432 34899999999999999999999998 999999999999997 7899999999998765433
Q ss_pred CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 497 ~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
...+|+.|+|||++.+..++.++|||||||++|||++|..||...... .....+....... +.. ..
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~---~~~--~~--- 227 (321)
T 1tki_A 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ------QIIENIMNAEYTF---DEE--AF--- 227 (321)
T ss_dssp EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCCCC---CHH--HH---
T ss_pred cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH------HHHHHHHcCCCCC---Chh--hh---
Confidence 234788999999999988999999999999999999999999764321 2222222221110 000 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 608 (635)
......+.+++.+||..||++|||+.|++++-
T Consensus 228 ~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 228 KEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 11234577888899999999999999999853
No 56
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.4e-39 Score=333.93 Aligned_cols=253 Identities=28% Similarity=0.432 Sum_probs=198.1
Q ss_pred hhccccccCceEEEEEEecCCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 342 SAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 342 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
..+.||+|+||+||+|... ..+++|+++..... .+.+.+|++++.++ +||||+++++++. .+..++||||+++
T Consensus 40 ~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~-~~~~~lv~e~~~~ 115 (307)
T 3lb7_A 40 LSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAIVTQWCEG 115 (307)
T ss_dssp EEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCSS
T ss_pred EEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEc-cCcEEEEEecCCC
Confidence 3578999999999999865 46899988764433 35688899999999 8999999999864 5668999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC----
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV---- 494 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~---- 494 (635)
|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++.....
T Consensus 116 ~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 116 SSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred CcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 99999996432 34999999999999999999999998 99999999999999999999999999975432
Q ss_pred --CCCCCCCCcccCccccc---CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 006696 495 --PATPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 569 (635)
Q Consensus 495 --~~~~~~t~~y~aPE~~~---~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 569 (635)
.....+|+.|+|||++. +..++.++|||||||++|||++|+.||......+ .................
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~------~~~~~~~~~~~~~~~~~- 261 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD------QIIFMVGRGYASPDLSK- 261 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH------HHHHHHHHTCCCCCSTT-
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH------HHHHHHhcCCCCcchhh-
Confidence 12345789999999986 5668899999999999999999999997543221 11111111111110000
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 570 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
........+.+++.+||+.+|++||++.|++++|+.+....++
T Consensus 262 -----~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 262 -----LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp -----SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred -----hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 0112234677888899999999999999999999999876543
No 57
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.6e-40 Score=341.13 Aligned_cols=247 Identities=21% Similarity=0.351 Sum_probs=180.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||+||+|... +++.||||++... ....+.+|+.++.++.+||||+++++++.++...++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 367999999999999975 5788999999753 3467788999999996699999999999999999999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCC---CeEEeccCCCCCCCCC---
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~---~~ki~DfGla~~~~~~--- 495 (635)
.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++ .+||+|||+++.....
T Consensus 94 ~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 165 (325)
T 3kn6_A 94 FERIKKK-----KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165 (325)
T ss_dssp HHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc
Confidence 9999743 34999999999999999999999998 99999999999998765 8999999999765432
Q ss_pred -CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCC-CChhHHHHHHhhhccccccchhhhhcc
Q 006696 496 -ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM-VDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 -~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ .........+........ ..
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~----- 238 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE--GE----- 238 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC--SH-----
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC--cc-----
Confidence 234568899999999999999999999999999999999999986543322 122222222222211100 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
........+.+++.+||+.||++|||++|++++
T Consensus 239 -~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 239 -AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp -HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred -cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 011223467788889999999999999999864
No 58
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=334.79 Aligned_cols=264 Identities=17% Similarity=0.244 Sum_probs=206.2
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc--CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCC--ceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~e~~~ 417 (635)
.++||+|+||+||+|.... ++.||||++.... ...+.+.+|++++.++ +||||+++++++...+ ..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 4689999999999999764 7899999997643 3456788999999999 8999999999998765 6799999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE----cCCCCeEEeccCCCCCCC
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI----NQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll----~~~~~~ki~DfGla~~~~ 493 (635)
+|+|.+++..... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 93 ~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp TCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred CCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999975432 234899999999999999999999998 9999999999999 788889999999997765
Q ss_pred CCC---CCCCCCcccCccccc--------CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006696 494 VPA---TPSRSAGYRAPEVIE--------TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 494 ~~~---~~~~t~~y~aPE~~~--------~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
... ...+|+.|+|||++. +..++.++|||||||++|||++|+.||........ ..............
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~p~ 245 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPS 245 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG--CHHHHHHHHHHCCT
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch--hHHHHHHHhcCCCc
Confidence 433 345788999999986 56789999999999999999999999975432221 12222222222111
Q ss_pred c---ccc---------hhhhh-cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 563 A---EVF---------DVELM-RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 563 ~---~~~---------d~~~~-~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
. ... ..... ...........+.+++.+||+.||++|||++|++++..+-...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred ccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 0 000 00000 1122345667788899999999999999999999999876543
No 59
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.3e-40 Score=341.07 Aligned_cols=241 Identities=22% Similarity=0.361 Sum_probs=193.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|... +++.||+|++..... ..+.+.+|+.+++.+ +||||+++++++.+.+..++||||+++|
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence 468999999999999976 678899999865432 246688999999999 9999999999999999999999999999
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC-----
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV----- 494 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~----- 494 (635)
+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999743 34899999999999999999999998 99999999999999999999999999975432
Q ss_pred -CCCCCCCCcccCcccccCCCC-CCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 495 -PATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 495 -~~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
.....+|+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ....+ ......
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~----~~~~~~---------- 227 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDW----KEKKTY---------- 227 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHH----HTTCTT----------
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHH----hccccc----------
Confidence 124568899999999987775 7789999999999999999999976543211 01111 101000
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
..........+.+++.+||+.||++|||++|++++
T Consensus 228 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 228 LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00011223456788889999999999999999885
No 60
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.8e-40 Score=342.38 Aligned_cols=246 Identities=22% Similarity=0.377 Sum_probs=194.7
Q ss_pred hccccccCceEEEEEEecC-CCe----EEEEEeeccc--CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STT----VVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~----vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|.+.. ++. ||+|.+.... ...+.+.+|+.++.++ +||||+++++++... ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESS-SEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecC-CeEEEEEe
Confidence 4689999999999999643 333 5788775443 2456799999999999 999999999999875 47899999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+.+|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CTTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999997543 34899999999999999999999998 999999999999999999999999998765432
Q ss_pred C------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006696 496 A------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 496 ~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
. ...+|..|+|||++.+..++.++|||||||++|||++ |+.||......+. . ..+.....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~----~~~~~~~~------ 237 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---S----SILEKGER------ 237 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---H----HHHHTTCC------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH---H----HHHHcCCC------
Confidence 2 1234678999999999999999999999999999999 9999986543321 1 11111110
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
..........+.+++.+||+.+|++||++.|++++|+.+...
T Consensus 238 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 238 ----LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ----CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred ----CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 111122334677888999999999999999999999998753
No 61
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=339.87 Aligned_cols=243 Identities=23% Similarity=0.380 Sum_probs=197.9
Q ss_pred hhccccccCceEEEEEEec-CCCeEEEEEeecccC-------CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEe
Q 006696 342 SAEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 342 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
..+.||+|+||.||+|... ++..||+|++..... ..+.+.+|+.++.++ +||||+++++++...+..++||
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 93 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILIL 93 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEE
Confidence 3578999999999999975 478899999976432 356789999999999 8999999999999999999999
Q ss_pred eeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCC----CeEEeccCCC
Q 006696 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLT 489 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~----~~ki~DfGla 489 (635)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++ .+||+|||++
T Consensus 94 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 94 ELVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp ECCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EcCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999642 34899999999999999999999998 99999999999999887 8999999999
Q ss_pred CCCCCC---CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 490 PLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 490 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
...... ....+|+.|+|||++.+..++.++|||||||++|||++|..||...... ............ +
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~~~~~~~~---~ 236 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANVSAVNYE---F 236 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHHTCCC---C
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH------HHHHHHHhcCCC---c
Confidence 766432 2345899999999999999999999999999999999999999754321 111111111110 0
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.... . ......+.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~~--~---~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 237 EDEY--F---SNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CHHH--H---TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred Cccc--c---ccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 0 1123456788889999999999999999974
No 62
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.1e-39 Score=346.85 Aligned_cols=246 Identities=19% Similarity=0.294 Sum_probs=191.3
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEe----CCceEEEeeeccC
Q 006696 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYFAS 418 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~~~~ 418 (635)
++||+|+||+||++... +++.||||++.. ...+.+|++++.++.+||||+++++++.. ....|+||||+++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 57999999999999975 478899999864 35677889888777799999999999876 5678999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC---CCCeEEeccCCCCCCCCC
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~---~~~~ki~DfGla~~~~~~ 495 (635)
|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 144 g~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 144 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp EEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999997532 235899999999999999999999998 999999999999998 789999999999765432
Q ss_pred ---CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 496 ---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+.... ....+....+... .. .
T Consensus 218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~i~~~~~~~~--~~---~ 290 (400)
T 1nxk_A 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIRMGQYEFP--NP---E 290 (400)
T ss_dssp ---------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS--HHHHHHHTCCCCC--TT---T
T ss_pred CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH--HHHHHHcCcccCC--Cc---c
Confidence 244578999999999999999999999999999999999999986654332211 1111111111000 00 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 609 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 609 (635)
. ......+.+++.+||+.||++|||+.|++++-.
T Consensus 291 ~---~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 291 W---SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp T---TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred c---ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 1 122345778888999999999999999998643
No 63
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.4e-40 Score=341.28 Aligned_cols=238 Identities=21% Similarity=0.327 Sum_probs=195.7
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+.+++.+ +||||+++++++...+..++||||+
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 46899999999999996 467899999987542 2245788999999999 8999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC--
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 92 ~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 92 GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 67999888642 34899999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCCCCcccCcccccCCCC-CCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 496 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 -~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......+.... +.... .
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~---------------i~~~~---~ 225 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK---------------VNSCV---Y 225 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC---------------CCSSC---C
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH---------------HHcCC---C
Confidence 34568999999999988776 6899999999999999999999986544332210 00000 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 608 (635)
.........+.+++.+||+.||.+|||++|++++=
T Consensus 226 ~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 226 VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 00111234567888899999999999999999853
No 64
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.3e-40 Score=344.68 Aligned_cols=246 Identities=23% Similarity=0.362 Sum_probs=195.2
Q ss_pred hccccccCceEEEEEEecC-CCe----EEEEEeeccc--CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STT----VVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~----vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|.+.. +.. |++|.+.... .....+.+|+.++.++ +||||+++++++. ++..++||||
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CCccEEEEEe
Confidence 4689999999999999653 443 7777775442 2235677899999999 9999999999885 5678999999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+++|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 96 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 96 LPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp CTTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred CCCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999997542 34889999999999999999999998 999999999999999999999999999876433
Q ss_pred C------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006696 496 A------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 496 ~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
. ...++..|+|||++.+..++.++|||||||++|||++ |..||......+. . ..+......
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~----~~~~~~~~~----- 236 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV---P----DLLEKGERL----- 236 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH---H----HHHHTTCBC-----
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH---H----HHHHcCCCC-----
Confidence 2 2235678999999999999999999999999999999 9999986543321 1 111111100
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
.........+.+++.+||+.||++|||+.|++++|+.+...
T Consensus 237 -----~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 237 -----AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp -----CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred -----CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00011223466788899999999999999999999998753
No 65
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=8e-40 Score=343.46 Aligned_cols=245 Identities=20% Similarity=0.307 Sum_probs=191.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||+||+++.. +++.||+|++.......+.+.+|+.+++++ +||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhC-CCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 467999999999999976 678899999987666667889999999999 899999999999999999999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCC--eEEeccCCCCCCCC---CC
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD--GCISDFGLTPLMNV---PA 496 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~--~ki~DfGla~~~~~---~~ 496 (635)
.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++.... ..
T Consensus 104 ~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~ 175 (361)
T 3uc3_A 104 YERICNA-----GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175 (361)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence 9998642 24899999999999999999999998 999999999999987765 99999999875432 23
Q ss_pred CCCCCCcccCcccccCCCCCCc-cchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 497 TPSRSAGYRAPEVIETRKHSHK-SDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 ~~~~t~~y~aPE~~~~~~~~~~-~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...+|+.|+|||++.+..++.+ +|||||||++|||++|+.||......+ ................ +.
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~~----------~~ 243 (361)
T 3uc3_A 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVKYSI----------PD 243 (361)
T ss_dssp -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTCCCC----------CT
T ss_pred CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCCCCC----------CC
Confidence 4468999999999988887665 899999999999999999998654322 2223333322221110 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 608 (635)
.......+.+++.+||+.||++|||+.|++++=
T Consensus 244 ~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 244 DIRISPECCHLISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred cCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence 001224567888899999999999999999863
No 66
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=344.15 Aligned_cols=238 Identities=24% Similarity=0.322 Sum_probs=194.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|+.. +++.||+|+++... .....+.+|..++..+.+||||+++++++.+.+..|+||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999975 47889999997642 2345677899999988789999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC--
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 108 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~ 179 (353)
T 3txo_A 108 GGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV 179 (353)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecccCCc
Confidence 99999999743 24899999999999999999999998 999999999999999999999999999864322
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 496 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 --~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .....+......
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~~~----------- 242 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED------DLFEAILNDEVV----------- 242 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC-----------
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCCC-----------
Confidence 2346899999999999989999999999999999999999999865422 222222222110
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNM------DEVVR 606 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~------~evl~ 606 (635)
........+.+++.+|++.||++||++ +|+++
T Consensus 243 -~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 243 -YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 001122356778889999999999998 77776
No 67
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.8e-40 Score=334.41 Aligned_cols=239 Identities=22% Similarity=0.339 Sum_probs=188.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---------------------------CHHHHHHHHHHHHhhCCCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------------------------GKRDFEQQMEIVGRVGQHP 394 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---------------------------~~~~~~~e~~~l~~l~~h~ 394 (635)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+++++++ +||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ 96 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL-DHP 96 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC-CCT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC-CCC
Confidence 467999999999999965 577899999875431 124688999999999 999
Q ss_pred ceeceeEEEEe--CCceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCC
Q 006696 395 NVVPLRAYYYS--KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASN 472 (635)
Q Consensus 395 niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~N 472 (635)
||+++++++.. .+..++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~N 167 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSN 167 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGG
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHH
Confidence 99999999987 5678999999999999887642 34999999999999999999999998 9999999999
Q ss_pred EEEcCCCCeEEeccCCCCCCCCC----CCCCCCCcccCcccccCCC---CCCccchHhHHHHHHHHHhCCCCCCCCCCCC
Q 006696 473 VLINQDLDGCISDFGLTPLMNVP----ATPSRSAGYRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545 (635)
Q Consensus 473 Ill~~~~~~ki~DfGla~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~ 545 (635)
|+++.++.+||+|||++...... ....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--- 244 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER--- 244 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS---
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc---
Confidence 99999999999999999765433 2346889999999998765 3778999999999999999999997542
Q ss_pred CCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 546 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.......+...... .+........+.+++.+||+.||++|||+.|++++
T Consensus 245 ---~~~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 ---IMCLHSKIKSQALE----------FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp ---HHHHHHHHHHCCCC----------CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred ---HHHHHHHHhcccCC----------CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 11122221111110 01111223457788889999999999999999864
No 68
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=347.89 Aligned_cols=252 Identities=23% Similarity=0.346 Sum_probs=201.1
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||.||+|.+. .+..||||+++.... ....+.+|+.++.++ +||||+++++++......++|||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCEEEEE
Confidence 568999999999999953 356799999975432 245688899999999 99999999999999999999999
Q ss_pred eccCCChhccccCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCC---CeEEeccCCC
Q 006696 415 YFASGSLSTLLHGNRG--AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLT 489 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~---~~ki~DfGla 489 (635)
|+++|+|.+++..... .....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 9999999999975432 12245899999999999999999999998 99999999999999555 5999999998
Q ss_pred CCCC------CCCCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006696 490 PLMN------VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 490 ~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
+... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .....+......
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~------~~~~~i~~~~~~ 305 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVTSGGRM 305 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHHTTCCC
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCC
Confidence 6431 1222346788999999999999999999999999999998 99999764321 111111111100
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 563 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
.........+.+++.+||+.||++|||+.|++++|+.+.+..
T Consensus 306 -----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 306 -----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -----------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 011122345778889999999999999999999999988654
No 69
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.5e-40 Score=343.97 Aligned_cols=255 Identities=17% Similarity=0.221 Sum_probs=192.9
Q ss_pred hccccccCceEEEEEEecC------CCeEEEEEeecccCCHHHHHHHHHH---------------HHhhCCCCceeceeE
Q 006696 343 AEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVVGKRDFEQQMEI---------------VGRVGQHPNVVPLRA 401 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~e~~~---------------l~~l~~h~niv~l~~ 401 (635)
.+.||+|+||.||+|.+.. ++.||||++.... ..+.+|+++ +..+ +|+||+++++
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~ 115 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKL-KYLGVPKYWG 115 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTC-SCCCSCCEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhc-cCCCCCeEEe
Confidence 4689999999999999765 3679999987542 233344443 3344 6999999999
Q ss_pred EEEeC----CceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEc-
Q 006696 402 YYYSK----DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN- 476 (635)
Q Consensus 402 ~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~- 476 (635)
++... ...++||||+ +++|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN----AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEETTEEEEEEEEECE-EEEHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEES
T ss_pred eeeeccCCcceEEEEEeCC-CCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEec
Confidence 99775 3479999999 99999999753 234999999999999999999999998 99999999999999
Q ss_pred -CCCCeEEeccCCCCCCCCC-----------CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCC
Q 006696 477 -QDLDGCISDFGLTPLMNVP-----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544 (635)
Q Consensus 477 -~~~~~ki~DfGla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~ 544 (635)
.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 8899999999999654321 1233889999999999999999999999999999999999999854322
Q ss_pred CCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCC
Q 006696 545 DMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 616 (635)
. ....+........ .....+..+.. ......+.+++..||+.+|++||++.++++.|+.+.+...
T Consensus 268 ~--~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 268 P--KYVRDSKIRYREN-IASLMDKCFPA----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp H--HHHHHHHHHHHHC-HHHHHHHHSCT----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred H--HHHHHHHHHhhhh-HHHHHHHhccc----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 1 1111111111111 11111111100 1123467788889999999999999999999999886543
No 70
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.8e-39 Score=338.38 Aligned_cols=246 Identities=19% Similarity=0.294 Sum_probs=194.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC----HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|+.. +++.||+|+++..... .+.+.+|..++.++.+||||+++++++.+.+..++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999976 4778999999865432 23477888999888789999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC---
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~--- 494 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~ 165 (345)
T 3a8x_A 94 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 165 (345)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence 99999998642 24899999999999999999999998 99999999999999999999999999976432
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCC--ChhHHHHHHhhhccccccchhhhh
Q 006696 495 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV--DLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 495 -~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .........+.....
T Consensus 166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------- 236 (345)
T 3a8x_A 166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------- 236 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC---------
T ss_pred cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC---------
Confidence 22456899999999999999999999999999999999999999754322111 111111111111110
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNM------DEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~------~evl~~ 607 (635)
.........+.+++.+||+.||++||++ +|++++
T Consensus 237 --~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 237 --RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred --CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 0011223456788889999999999996 677663
No 71
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=5.9e-40 Score=342.11 Aligned_cols=252 Identities=23% Similarity=0.401 Sum_probs=201.8
Q ss_pred hccccccCceEEEEEEecC------CCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||.||+|...+ ++.||+|+++.... ..+.+.+|+.++.++ +||||+++++++...+..++|||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccCCceEEEEe
Confidence 4679999999999999753 37899999976432 245688999999999 99999999999999999999999
Q ss_pred eccCCChhccccCCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE
Q 006696 415 YFASGSLSTLLHGNRGA-------------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI 475 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll 475 (635)
|+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+||++
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLV 207 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEE
Confidence 99999999999754211 1246899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeccCCCCCCCC------CCCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 006696 476 NQDLDGCISDFGLTPLMNV------PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548 (635)
Q Consensus 476 ~~~~~~ki~DfGla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~ 548 (635)
+.++.+||+|||++..... .....+++.|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---- 283 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE---- 283 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH----
Confidence 9999999999999865422 223446788999999998899999999999999999999 99999754321
Q ss_pred hhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 549 LPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
........... .. ........+.+++.+||+.||++|||+.|++++|+++.+..
T Consensus 284 --~~~~~~~~~~~-~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 284 --EVIYYVRDGNI-LA----------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp --HHHHHHHTTCC-CC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred --HHHHHHhCCCc-CC----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 11111111111 00 01122346778889999999999999999999999988654
No 72
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=331.79 Aligned_cols=253 Identities=27% Similarity=0.412 Sum_probs=195.2
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||+||+|... ++.||+|++... ...+.+.+|++++.++ +||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRV-NHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHC-CCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcC-CCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 468999999999999986 688999998643 2356788999999999 9999999999876 4589999999999999
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCC-eEEeccCCCCCCCCC-CCCCC
Q 006696 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-GCISDFGLTPLMNVP-ATPSR 500 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~-~ki~DfGla~~~~~~-~~~~~ 500 (635)
+++.... ....+++..+..++.|++.||+|||+.+...|+||||||+||+++.++. +||+|||++...... ....+
T Consensus 88 ~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~g 165 (307)
T 2eva_A 88 NVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG 165 (307)
T ss_dssp HHHHCSS--SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------C
T ss_pred HHHhccC--CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCC
Confidence 9997543 1234788999999999999999999932223999999999999998887 799999999765433 23458
Q ss_pred CCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHH
Q 006696 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEM 580 (635)
Q Consensus 501 t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 580 (635)
|+.|+|||++.+..++.++||||||+++|||++|+.||....... ......... .... .......
T Consensus 166 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~-~~~~----------~~~~~~~ 230 (307)
T 2eva_A 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA----FRIMWAVHN-GTRP----------PLIKNLP 230 (307)
T ss_dssp CTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH----HHHHHHHHT-TCCC----------CCBTTCC
T ss_pred CCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH----HHHHHHHhc-CCCC----------CcccccC
Confidence 899999999999999999999999999999999999997543221 111111111 1000 0111223
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 581 VQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 581 ~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
..+.+++.+||+.||++|||++|++++|+.+.+....
T Consensus 231 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 231 KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 4577888899999999999999999999999876654
No 73
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2e-39 Score=329.44 Aligned_cols=247 Identities=22% Similarity=0.426 Sum_probs=195.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC--------HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEe
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
.+.||+|+||+||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++.+.. ++||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~--~lv~ 100 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNPP--RMVM 100 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTTT--EEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCCC--eEEE
Confidence 467999999999999974 6788999998654321 15788999999999 8999999999985443 7999
Q ss_pred eeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCC-----eEEeccCC
Q 006696 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-----GCISDFGL 488 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~-----~ki~DfGl 488 (635)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||||+||+++.++. +||+|||+
T Consensus 101 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp ECCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred EecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 9999999998886432 35999999999999999999999985 45999999999999988776 99999999
Q ss_pred CCCCCCCC-CCCCCCcccCccccc--CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 006696 489 TPLMNVPA-TPSRSAGYRAPEVIE--TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 565 (635)
Q Consensus 489 a~~~~~~~-~~~~t~~y~aPE~~~--~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (635)
++...... ...+++.|+|||++. ...++.++|||||||++|||++|+.||......+ ...............
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~- 250 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIREEGLRPT- 250 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH----HHHHHHHHHSCCCCC-
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH----HHHHHHHhccCCCCC-
Confidence 97654432 356889999999994 4557899999999999999999999997654322 111222111111111
Q ss_pred chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 006696 566 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611 (635)
Q Consensus 566 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 611 (635)
........+.+++.+||+.||++|||++|+++.|+++
T Consensus 251 ---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 251 ---------IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ---------CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1112234677888899999999999999999999864
No 74
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.8e-39 Score=336.51 Aligned_cols=240 Identities=19% Similarity=0.321 Sum_probs=190.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCc-----------
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE----------- 408 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----------- 408 (635)
.+.||+|+||.||+|+.. +++.||||+++.... ..+.+.+|+++++++ +||||+++++++.+...
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEKWQEEMDEIW 89 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence 568999999999999976 688999999975432 346789999999999 99999999999866542
Q ss_pred ----------------------------------------------eEEEeeeccCCChhccccCCCCCCCCCCCHHHHH
Q 006696 409 ----------------------------------------------KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442 (635)
Q Consensus 409 ----------------------------------------------~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~ 442 (635)
.++||||+++|+|.+++.... .....++..+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~ 167 (332)
T 3qd2_B 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--SLEDREHGVCL 167 (332)
T ss_dssp ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC--SGGGSCHHHHH
T ss_pred hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc--CccchhhHHHH
Confidence 789999999999999997643 23446777899
Q ss_pred HHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----------------CCCCCCCcccC
Q 006696 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----------------ATPSRSAGYRA 506 (635)
Q Consensus 443 ~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~----------------~~~~~t~~y~a 506 (635)
.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|
T Consensus 168 ~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 99999999999999998 999999999999999999999999999765433 22357889999
Q ss_pred cccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHH
Q 006696 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQI 586 (635)
Q Consensus 507 PE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 586 (635)
||++.+..++.++|||||||++|||++|..|+... ........ ... ...........+.++
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~--------~~~~~~~~-~~~----------~~~~~~~~~~~~~~l 305 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER--------VRIITDVR-NLK----------FPLLFTQKYPQEHMM 305 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH--------HHHHHHHH-TTC----------CCHHHHHHCHHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH--------HHHHHHhh-ccC----------CCcccccCChhHHHH
Confidence 99999999999999999999999999987765310 00011100 000 001112334556789
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 006696 587 GMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 587 i~~Cl~~dP~~RPs~~evl~~ 607 (635)
+.+||+.||++|||++|++++
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHccCCCCcCCCHHHHhhc
Confidence 999999999999999999874
No 75
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.1e-40 Score=343.70 Aligned_cols=238 Identities=22% Similarity=0.354 Sum_probs=195.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|+.. +++.||+|+++... .....+..|..++..+.+||||+++++++.+.+..++||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999976 47889999997642 2345677888898887799999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC---
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~--- 494 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 102 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 102 GGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173 (345)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC
Confidence 99999999742 24899999999999999999999998 99999999999999999999999999976432
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 495 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 495 -~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.. .....+...... +
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~~~---~------- 237 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE------ELFHSIRMDNPF---Y------- 237 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC---C-------
T ss_pred cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH------HHHHHHHhCCCC---C-------
Confidence 23456899999999999999999999999999999999999999764321 112222211110 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMD-EVVR 606 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~-evl~ 606 (635)
.......+.+++.+||+.||++||++. |+++
T Consensus 238 --p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 238 --PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp --CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred --CcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 011224567788899999999999998 7764
No 76
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.8e-39 Score=338.34 Aligned_cols=242 Identities=21% Similarity=0.331 Sum_probs=196.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|... ++..||+|++...... .+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999975 5789999999765443 34678899999999 999999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCC---CeEEeccCCCCCCCCC
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~---~~ki~DfGla~~~~~~ 495 (635)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||++......
T Consensus 113 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 113 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999998642 35899999999999999999999998 99999999999998654 5999999999876543
Q ss_pred C---CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 496 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ~---~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
. ...+|+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+........ .. .
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~------~~~~~~i~~~~~~~~--~~---~ 253 (362)
T 2bdw_A 185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQIKAGAYDYP--SP---E 253 (362)
T ss_dssp CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCCC--TT---G
T ss_pred cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCCCC--cc---c
Confidence 3 34689999999999999999999999999999999999999975432 112222221111100 00 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
. ......+.+++.+||+.||++|||+.|++++
T Consensus 254 ~---~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 254 W---DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp G---GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c---cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1223456788889999999999999999875
No 77
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-40 Score=342.83 Aligned_cols=258 Identities=23% Similarity=0.334 Sum_probs=201.4
Q ss_pred hhccccccCceEEEEEEec------CCCeEEEEEeeccc--CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEe
Q 006696 342 SAEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 342 ~~~~iG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
..+.||+|+||.||+|... .+..||+|++.... ...+.+.+|+.++.++.+||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 3578999999999999962 34579999997543 234678899999999988999999999999999999999
Q ss_pred eeccCCChhccccCCCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE
Q 006696 414 DYFASGSLSTLLHGNRGA------------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI 475 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll 475 (635)
||+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+||++
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll 205 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLV 205 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEE
Confidence 999999999999754321 0134899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeccCCCCCCCCCCC------CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 006696 476 NQDLDGCISDFGLTPLMNVPAT------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548 (635)
Q Consensus 476 ~~~~~~ki~DfGla~~~~~~~~------~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~ 548 (635)
+.++.+||+|||++........ ..+|+.|+|||++.+..++.++||||||+++|||+| |..||......+
T Consensus 206 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 282 (344)
T 1rjb_A 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA--- 282 (344)
T ss_dssp ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH---
T ss_pred cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH---
Confidence 9999999999999976543321 224678999999999899999999999999999998 999997654321
Q ss_pred hhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCCC
Q 006696 549 LPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 618 (635)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 618 (635)
............ .........+.+++.+||+.||.+|||+.|++++|+.+.....+.
T Consensus 283 ---~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 339 (344)
T 1rjb_A 283 ---NFYKLIQNGFKM----------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339 (344)
T ss_dssp ---HHHHHHHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred ---HHHHHHhcCCCC----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHH
Confidence 111222221111 011122346778888999999999999999999999998776554
No 78
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6.9e-40 Score=336.98 Aligned_cols=255 Identities=25% Similarity=0.408 Sum_probs=205.7
Q ss_pred hccccccCceEEEEEEe------cCCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVL------EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||.||+|.. .++..||+|+++.... ..+.+.+|+.++.++.+||||+++++++...+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 107 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence 57899999999999985 2457899999975532 246788999999999889999999999999999999999
Q ss_pred eccCCChhccccCCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCe
Q 006696 415 YFASGSLSTLLHGNRGA-------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 481 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ 481 (635)
|+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 184 (313)
T 1t46_A 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRIT 184 (313)
T ss_dssp CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEETTTEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEcCCCCE
Confidence 99999999999754321 1234899999999999999999999998 9999999999999999999
Q ss_pred EEeccCCCCCCCCCCC------CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 006696 482 CISDFGLTPLMNVPAT------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 554 (635)
Q Consensus 482 ki~DfGla~~~~~~~~------~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 554 (635)
||+|||++........ ..+++.|+|||++.+..++.++||||||+++|||++ |..||......+ ...
T Consensus 185 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~ 258 (313)
T 1t46_A 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------KFY 258 (313)
T ss_dssp EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH------HHH
T ss_pred EEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh------HHH
Confidence 9999999987654332 224667999999999999999999999999999999 999997654321 111
Q ss_pred HHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCC
Q 006696 555 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 555 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 616 (635)
......... .........+.+++.+||+.||++|||+.|++++|+++.....
T Consensus 259 ~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 259 KMIKEGFRM----------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHHHHTCCC----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHhccCCCC----------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 122111110 0011223467788889999999999999999999999887543
No 79
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.6e-39 Score=339.99 Aligned_cols=246 Identities=16% Similarity=0.289 Sum_probs=197.1
Q ss_pred hhccccccCceEEEEEEec-CCCeEEEEEeeccc------CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEee
Q 006696 342 SAEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV------VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 342 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
..+.||+|+||+||+|... +++.||+|++.... ...+.+.+|+.++..+ +||||+++++++..++..++|||
T Consensus 28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e 106 (351)
T 3c0i_A 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFE 106 (351)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEE
T ss_pred EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEe
Confidence 3578999999999999975 57899999986432 2357789999999999 99999999999999999999999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCC---eEEeccCCCCC
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTPL 491 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~---~ki~DfGla~~ 491 (635)
|+++|+|.+++..... ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|||++..
T Consensus 107 ~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 107 FMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp CCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred CCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 9999999888754322 1234899999999999999999999998 999999999999987655 99999999976
Q ss_pred CCCC----CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006696 492 MNVP----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 492 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
.... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.... ......+...... ..
T Consensus 183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~i~~~~~~---~~ 252 (351)
T 3c0i_A 183 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-------ERLFEGIIKGKYK---MN 252 (351)
T ss_dssp CCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------HHHHHHHHHTCCC---CC
T ss_pred ecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------HHHHHHHHcCCCC---CC
Confidence 6543 23458999999999999999999999999999999999999997532 1111222211111 00
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.. .. ......+.+++.+||+.||++|||+.|++++
T Consensus 253 ~~--~~---~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 253 PR--QW---SHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HH--HH---TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc--cc---ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 00 1123457788889999999999999999873
No 80
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.3e-40 Score=363.12 Aligned_cols=248 Identities=25% Similarity=0.433 Sum_probs=205.6
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||.||+|.+.++..||||+++......+.+.+|+++++++ +|+||+++++++.+ +..++||||+++|+|.
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 578999999999999998888899999987766778899999999999 99999999999865 7789999999999999
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC-----CC
Q 006696 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-----~~ 497 (635)
++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++..... ..
T Consensus 350 ~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 423 (535)
T 2h8h_A 350 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423 (535)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred HHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence 9997432 124899999999999999999999998 999999999999999999999999999876432 22
Q ss_pred CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..++..|+|||++....++.++|||||||++|||++ |+.||.+....+ .... +..... ....
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~------~~~~-i~~~~~----------~~~~ 486 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQ-VERGYR----------MPCP 486 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH------HHHH-HHTTCC----------CCCC
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHH-HHcCCC----------CCCC
Confidence 335678999999999999999999999999999999 999997643211 1111 111111 1111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
......+.++|.+||+.||++|||++++++.|+.+....
T Consensus 487 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 223456778889999999999999999999999876543
No 81
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.1e-40 Score=346.72 Aligned_cols=193 Identities=21% Similarity=0.337 Sum_probs=169.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhC----CCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG----QHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~----~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|... +++.||||+++........+..|++++..+. .||||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~- 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL- 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence 468999999999999974 5788999999765444567788999999884 4999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC--------------------
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-------------------- 477 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~-------------------- 477 (635)
+++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~ 192 (360)
T 3llt_A 119 GPSLYEIITRNN---YNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192 (360)
T ss_dssp CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhccccccccc
Confidence 889999997543 234899999999999999999999998 999999999999975
Q ss_pred -----CCCeEEeccCCCCCCCCC-CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCC
Q 006696 478 -----DLDGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542 (635)
Q Consensus 478 -----~~~~ki~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~ 542 (635)
++.+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 263 (360)
T 3llt_A 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE 263 (360)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc
Confidence 789999999999765443 34568899999999999999999999999999999999999998644
No 82
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=347.22 Aligned_cols=242 Identities=20% Similarity=0.313 Sum_probs=195.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|... +++.+|+|++...... .+.+.+|+++++++ +||||+++++++.+++..++||||+++
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~g 94 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence 578999999999999864 5788999998765432 35688999999999 999999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEc---CCCCeEEeccCCCCCCCCC
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN---QDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~---~~~~~ki~DfGla~~~~~~ 495 (635)
|+|.+.+... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ +++.+||+|||++......
T Consensus 95 g~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 95 GELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp CBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 9999998743 34899999999999999999999998 99999999999998 4678999999999776543
Q ss_pred C----CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006696 496 A----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 496 ~----~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
. ...||+.|+|||++.+..++.++||||+||++|||++|..||...+.. .....+....... ..+
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~--~~~--- 235 (444)
T 3soa_A 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH------RLYQQIKAGAYDF--PSP--- 235 (444)
T ss_dssp CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCCCC--CTT---
T ss_pred CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHhCCCCC--Ccc---
Confidence 2 346899999999999999999999999999999999999999754321 1122222111110 000
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
... .....+.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~---~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 EWD---TVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTT---TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccc---cCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 111 223456788889999999999999999984
No 83
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=5e-40 Score=349.41 Aligned_cols=241 Identities=22% Similarity=0.313 Sum_probs=195.4
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|+... ++.||+|++++.. .....+.+|+.++..+ +||||+++++++.+.+..|+||||++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~ 152 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMVMEYMP 152 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 4689999999999999764 7789999997532 2344588899999998 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC--
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.++++.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 153 gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 153 GGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp TEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred CCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 99999998642 3899999999999999999999998 999999999999999999999999999765443
Q ss_pred ---CCCCCCCcccCcccccCCC----CCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006696 496 ---ATPSRSAGYRAPEVIETRK----HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 496 ---~~~~~t~~y~aPE~~~~~~----~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
.+..||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.+.. .....+.......
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~----- 292 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMNHKNSL----- 292 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHHC-----
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh------hHHHHHHhccccc-----
Confidence 2557899999999997665 789999999999999999999999854321 2222222111000
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 006696 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDM--RPNMDEVVRM 607 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPs~~evl~~ 607 (635)
..+........+.+++.+|++.+|.+ ||+++|++++
T Consensus 293 ---~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 293 ---TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ---CCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ---cCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 01111112345677888999999998 9999999985
No 84
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=341.67 Aligned_cols=240 Identities=20% Similarity=0.303 Sum_probs=195.2
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||++.... ++.||+|++.... ...+.+.+|+.++..+ +||||+++++++.+.+..++||||+.
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lv~e~~~ 98 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMVVDLLL 98 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 5789999999999999764 7789999987542 2346788999999999 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC--
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 99 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 99 GGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp TEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 99999999742 34999999999999999999999998 999999999999999999999999999765433
Q ss_pred -CCCCCCCcccCcccccC---CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006696 496 -ATPSRSAGYRAPEVIET---RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 496 -~~~~~t~~y~aPE~~~~---~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
....||+.|+|||++.. ..++.++|||||||++|||++|+.||........ ............
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~---~~~~~~~~~~~~---------- 237 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS---KEIVHTFETTVV---------- 237 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH---HHHHHHHHHCCC----------
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH---HHHHHHHhhccc----------
Confidence 34568999999999974 4589999999999999999999999975543321 111111111110
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPN-MDEVVR 606 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-~~evl~ 606 (635)
.........+.+++.+||+.||++||+ ++++.+
T Consensus 238 --~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 --TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 011122346778888999999999999 677665
No 85
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=9.7e-40 Score=337.65 Aligned_cols=254 Identities=23% Similarity=0.407 Sum_probs=191.2
Q ss_pred hccccccCceEEEEEEecCCC----eEEEEEeecccC---CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCce------
Q 006696 343 AEVLGKGSYGTAYKAVLEEST----TVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK------ 409 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~----~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~------ 409 (635)
.+.||+|+||.||+|....+. .||||+++.... ..+.+.+|+++++++ +||||+++++++...+..
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC-------CE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-CCCceehhhceeeccccccCCCcc
Confidence 578999999999999966433 799999976532 246788999999999 999999999999877655
Q ss_pred EEEeeeccCCChhccccCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCC
Q 006696 410 LLVYDYFASGSLSTLLHGNRG-AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 488 (635)
Q Consensus 410 ~lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGl 488 (635)
++||||+++|+|.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl~Dfg~ 183 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGL 183 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEEeeccc
Confidence 999999999999999864331 12235899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCC------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006696 489 TPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 489 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
++...... ...+++.|+|||.+.+..++.++|||||||++|||++ |..||......+. .........
T Consensus 184 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~------~~~~~~~~~ 257 (323)
T 3qup_A 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI------YNYLIGGNR 257 (323)
T ss_dssp -----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH------HHHHHTTCC
T ss_pred cccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH------HHHHhcCCC
Confidence 97654322 2235667999999999999999999999999999999 9999986543221 111111111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
..........+.+++.+||+.||++|||+.|+++.|+++.+....
T Consensus 258 -----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 258 -----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp -----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred -----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 011122334678888999999999999999999999999977654
No 86
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.2e-38 Score=325.10 Aligned_cols=255 Identities=17% Similarity=0.168 Sum_probs=199.3
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCcee-ceeEEEEeCCceEEEeeeccCCC
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVV-PLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv-~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||.||+|.. .+++.||+|++.... ..+.+.+|+.++.++ +|++++ .+..+....+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHh-hcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 46799999999999996 568889999986543 345688999999999 555544 4444446677789999999 899
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE---cCCCCeEEeccCCCCCCCCC--
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~ki~DfGla~~~~~~-- 495 (635)
|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ ++++.+||+|||++......
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 999997432 34999999999999999999999998 9999999999999 48899999999998765432
Q ss_pred ---------CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 496 ---------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 ---------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....+++.|+|||++.+..++.++|||||||++|||++|+.||......+.................
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI---- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch----
Confidence 2345788999999999999999999999999999999999999876544433332222111100000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
. .. . ......+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 240 ~-~~--~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 240 E-VL--C---KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp H-HH--T---TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred H-HH--H---hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 0 00 0 11224577888899999999999999999999999876544
No 87
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.2e-39 Score=327.64 Aligned_cols=249 Identities=26% Similarity=0.430 Sum_probs=204.5
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||.||+|...++..||+|+++......+.+.+|++++.++ +||||+++++++. .+..++||||+++++|.
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhC-CCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 568999999999999988888999999987766778899999999999 9999999999986 55689999999999999
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-----C
Q 006696 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-----T 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-----~ 497 (635)
+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++....... .
T Consensus 96 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 96 DFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp HHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 9997432 124899999999999999999999998 9999999999999999999999999997654322 2
Q ss_pred CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ....... ..... ...
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~~~~~-~~~~~----------~~~ 232 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP------EVIQNLE-RGYRM----------VRP 232 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHHHHH-TTCCC----------CCC
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH------HHHHHHh-cccCC----------CCc
Confidence 335678999999998889999999999999999999 99999754321 1111111 11110 001
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCC
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 616 (635)
......+.+++.+||+.||++|||+.++++.|+++.....
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 1223467788889999999999999999999999986543
No 88
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=337.71 Aligned_cols=267 Identities=23% Similarity=0.344 Sum_probs=193.8
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHH--hhCCCCceeceeEEEEeC-----CceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVG--RVGQHPNVVPLRAYYYSK-----DEKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~--~l~~h~niv~l~~~~~~~-----~~~~lv~e~ 415 (635)
.+.||+|+||.||+|+. +++.||||++.... ...+..|.++.. .+ +||||+++++.+... ...++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~-~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLM-EHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhc-cCcchhhheecccccccCCCceEEEEEec
Confidence 46899999999999987 47899999997543 344455555543 34 899999999876532 256899999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------CCCCceecCCCCCCEEEcCCCCeEEecc
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM---------GGPKFTHGNIKASNVLINQDLDGCISDF 486 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---------~~~~ivHrDlk~~NIll~~~~~~ki~Df 486 (635)
+++|+|.+++... ..++..+..++.||+.||+|||+. + |+||||||+|||++.++.+||+||
T Consensus 94 ~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 94 YPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEECCC
T ss_pred CCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEeec
Confidence 9999999999643 268899999999999999999998 7 999999999999999999999999
Q ss_pred CCCCCCCCC------------CCCCCCCcccCcccccC-------CCCCCccchHhHHHHHHHHHhCCCCCCCC-CCCCC
Q 006696 487 GLTPLMNVP------------ATPSRSAGYRAPEVIET-------RKHSHKSDVYSFGVLLLEMLTGKAPLQSP-TRDDM 546 (635)
Q Consensus 487 Gla~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~~DvwS~Gv~l~elltg~~p~~~~-~~~~~ 546 (635)
|+++..... ....+|+.|+|||++.+ ..++.++|||||||++|||++|..||... ...+.
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~ 244 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence 999765321 12357889999999987 45677899999999999999997766433 22222
Q ss_pred CChh----------HHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCC
Q 006696 547 VDLP----------RWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 547 ~~~~----------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 616 (635)
.... ...............+.. ...........+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE---AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT---TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHhhhcccCCCchHHHHHhhhcccccCCCCCc---ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 1110 011111111111111111 111123455678899999999999999999999999999998887
Q ss_pred CCCCCCccC
Q 006696 617 ENRPSSEEN 625 (635)
Q Consensus 617 ~~~~~~~~~ 625 (635)
.+...+..+
T Consensus 322 ~~~~~~~~~ 330 (336)
T 3g2f_A 322 RNKSVSPTA 330 (336)
T ss_dssp C--------
T ss_pred hcccCCCcc
Confidence 766554433
No 89
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=362.87 Aligned_cols=247 Identities=23% Similarity=0.362 Sum_probs=200.4
Q ss_pred cccccCceEEEEEEec---CCCeEEEEEeeccc--CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 345 VLGKGSYGTAYKAVLE---ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 345 ~iG~G~fg~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.||+|+||.||+|.+. ++..||||+++... ...+.+.+|++++.++ +|||||++++++.. +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 6999999999999864 45679999998653 2467899999999999 99999999999976 5689999999999
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCCC--
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT-- 497 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~~-- 497 (635)
+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 421 ~L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 421 PLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp BHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred cHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 999999643 235999999999999999999999998 99999999999999999999999999987643221
Q ss_pred -----CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006696 498 -----PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 498 -----~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
..+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ .... +.....
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~-i~~~~~--------- 557 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAF-IEQGKR--------- 557 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH------HHHH-HHTTCC---------
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHHH-HHcCCC---------
Confidence 123578999999999999999999999999999998 999998654322 1111 111111
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
..........+.++|.+||+.+|++||++.++++.|+.+......
T Consensus 558 -~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 558 -MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp -CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred -CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 111122345678889999999999999999999999998766543
No 90
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-39 Score=333.64 Aligned_cols=238 Identities=19% Similarity=0.278 Sum_probs=197.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+++.. +++.||+|+++... ...+.+.+|..++..+ +||||+++++++.+.+..++||||++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 468999999999999975 58899999997642 2345678899999998 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC-C
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-A 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-~ 496 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 90 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 90 GGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp SCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 99999999743 34899999999999999999999998 999999999999999999999999999765443 3
Q ss_pred CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 497 ~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
+..||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+...... ..
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~i~~~~~~---------~p--- 223 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEKILNAELR---------FP--- 223 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHCCCC---------CC---
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCC---------CC---
Confidence 45689999999999999999999999999999999999999975432 1222222222110 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 607 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~ 607 (635)
......+.+++.+|++.||++|| +++|++++
T Consensus 224 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 224 PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 11224567788899999999999 89999874
No 91
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.1e-39 Score=328.01 Aligned_cols=248 Identities=24% Similarity=0.376 Sum_probs=199.9
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeC--CceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... ++.||+|+++..... .+.+.+|+.++.++ +||||+++++++.+. ...++||||++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCCeEeeecccC
Confidence 468999999999999986 788999999865433 35688899999998 899999999999877 67899999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCCC
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 497 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~~ 497 (635)
+|+|.+++.... ...+++..+..++.|++.||+|||+.+ ++++||||||+||+++.++.++|+|||++..... ..
T Consensus 93 ~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-~~ 167 (271)
T 3kmu_A 93 YGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-PG 167 (271)
T ss_dssp TCBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-TT
T ss_pred CCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc-cC
Confidence 999999997543 235899999999999999999999975 5699999999999999999999999888765332 34
Q ss_pred CCCCCcccCcccccCCCCCC---ccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006696 498 PSRSAGYRAPEVIETRKHSH---KSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 498 ~~~t~~y~aPE~~~~~~~~~---~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
..+|+.|+|||++.+..++. ++||||||+++|||++|+.||...... ...............
T Consensus 168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~~--------- 232 (271)
T 3kmu_A 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM------EIGMKVALEGLRPTI--------- 232 (271)
T ss_dssp CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH------HHHHHHHHSCCCCCC---------
T ss_pred ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH------HHHHHHHhcCCCCCC---------
Confidence 46789999999998766554 799999999999999999999754321 111222212111111
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhh
Q 006696 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613 (635)
Q Consensus 575 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 613 (635)
.......+.+++.+||+.||++|||++|+++.|+.+.+
T Consensus 233 -~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 233 -PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11223457788889999999999999999999999864
No 92
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4.7e-40 Score=334.34 Aligned_cols=253 Identities=24% Similarity=0.369 Sum_probs=192.9
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccC---CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|...+++.||+|++..... ....+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 467999999999999998899999999865432 236788999999999 899999999999999999999999986
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 85 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 85 DLKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp EHHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 9998887432 34899999999999999999999998 999999999999999999999999998754322
Q ss_pred CCCCCCCcccCcccccCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh----cccc----ccc
Q 006696 496 ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE----EWTA----EVF 566 (635)
Q Consensus 496 ~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~ 566 (635)
....+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+. +.. ....... .|.. ..+
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ--LMR-IFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHH-HHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHH-HHHHHCCCChhhchhhhccccc
Confidence 233578899999999764 589999999999999999999999976432111 111 1111100 0000 001
Q ss_pred hhhhhcc------cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 567 DVELMRF------QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~------~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
+...... .........+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1110000 0001123456788889999999999999999874
No 93
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.3e-39 Score=329.94 Aligned_cols=247 Identities=22% Similarity=0.379 Sum_probs=190.6
Q ss_pred hccccccCceEEEEEEecC----CCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeec
Q 006696 343 AEVLGKGSYGTAYKAVLEE----STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+|+||.||+|.... +..||+|+++.... ..+.+.+|+.++.++ +||||+++++++ .++..++||||+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~~ 97 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVI-TENPVWIIMELC 97 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCccceEEEEE-ccCccEEEEecC
Confidence 5789999999999999753 34689998865432 245688999999999 999999999997 456789999999
Q ss_pred cCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC
Q 006696 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 496 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~ 496 (635)
++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 98 TLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp TTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999997432 34899999999999999999999998 9999999999999999999999999997764432
Q ss_pred -----CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006696 497 -----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 497 -----~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
...+++.|+|||++.+..++.++||||||+++|||++ |..||......+. ...+.....
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~------~~~i~~~~~--------- 235 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV------IGRIENGER--------- 235 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH------HHHHHTTCC---------
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH------HHHHHcCCC---------
Confidence 1234668999999998899999999999999999997 9999986543221 111111110
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
..........+.+++.+||+.||++|||+.|++++|+++.+..
T Consensus 236 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 236 --LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 0011122346778888999999999999999999999987643
No 94
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5.4e-40 Score=337.91 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=202.9
Q ss_pred hhccccccCceEEEEEEec------CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEe
Q 006696 342 SAEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 342 ~~~~iG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
..+.||+|+||.||+|... ++..||+|++..... ..+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 105 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIV 105 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCceeeEEEEEecCCceEEEE
Confidence 3578999999999999862 347899999975432 235688899999999 9999999999999999999999
Q ss_pred eeccCCChhccccCCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEE
Q 006696 414 DYFASGSLSTLLHGNRGA-------------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVL 474 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIl 474 (635)
||+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+||+
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp~NIl 182 (314)
T 2ivs_A 106 EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNIL 182 (314)
T ss_dssp ECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEE
T ss_pred eecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---CcccccchheEE
Confidence 999999999999754321 1234899999999999999999999998 999999999999
Q ss_pred EcCCCCeEEeccCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCC
Q 006696 475 INQDLDGCISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547 (635)
Q Consensus 475 l~~~~~~ki~DfGla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~ 547 (635)
++.++.+||+|||++....... ...+++.|+|||.+.+..++.++||||||+++|||++ |..||......+.
T Consensus 183 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~- 261 (314)
T 2ivs_A 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL- 261 (314)
T ss_dssp EETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-
Confidence 9999999999999987654322 2235677999999999889999999999999999999 9999986543221
Q ss_pred ChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 548 DLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
. ......... .........+.+++.+||+.||++|||+.|++++|+++.+.
T Consensus 262 --~----~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 262 --F----NLLKTGHRM----------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp --H----HHHHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --H----HHhhcCCcC----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 1 111111100 01112234677888899999999999999999999998764
No 95
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=333.55 Aligned_cols=237 Identities=22% Similarity=0.323 Sum_probs=187.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCH---HHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGK---RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.++||+|+||+||+|... +++.||||++....... .....|+..+.++.+|+||+++++++.+.+..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 568999999999999976 68899999987654332 344556666666669999999999999999999999999 6
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC---
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
++|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 141 ~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 213 (311)
T 3p1a_A 141 PSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213 (311)
T ss_dssp CBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence 69988886532 34999999999999999999999998 999999999999999999999999998765433
Q ss_pred CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 496 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
....||+.|+|||++.+ .++.++|||||||++|||++|..|+.... .+ .. +.... .....
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~--------~~-~~-~~~~~----~~~~~----- 273 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE--------GW-QQ-LRQGY----LPPEF----- 273 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------HH-HH-HTTTC----CCHHH-----
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HH-HH-HhccC----CCccc-----
Confidence 23457899999999876 78999999999999999999977765321 01 11 11111 11111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.......+.+++.+||+.||++|||++|++++
T Consensus 274 ~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 274 TAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 01123467788889999999999999999874
No 96
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-40 Score=344.78 Aligned_cols=252 Identities=25% Similarity=0.407 Sum_probs=193.6
Q ss_pred hccccccCceEEEEEEecC--C--CeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEe-CCceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLEE--S--TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS-KDEKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~--~--~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|...+ + ..||+|.++.... ..+.+.+|+.+++++ +||||+++++++.. ++..++||||
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCCeEEEEEC
Confidence 4689999999999998642 2 3588998865432 245788999999999 89999999998754 4578999999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+++|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 173 ~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 173 MKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp CTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999997432 34889999999999999999999998 999999999999999999999999999765322
Q ss_pred C--------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 496 A--------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 ~--------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
. ...+++.|+|||++.+..++.++|||||||++|||++ |.+||......+ +.... .....
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~~---~~~~~----- 314 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYL---LQGRR----- 314 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHHH---HTTCC-----
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHHH---HcCCC-----
Confidence 1 2235667999999999999999999999999999999 677887554332 11111 11110
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCCCC
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENR 619 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 619 (635)
..........+.+++.+||+.||++|||+.|+++.|+++......+.
T Consensus 315 ------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 315 ------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 00111223467788899999999999999999999999997766544
No 97
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1e-39 Score=331.62 Aligned_cols=249 Identities=25% Similarity=0.403 Sum_probs=206.2
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|.... +..||+|++.......+.+.+|+++++++ +||||+++++++..++..++||||+++|+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 4689999999999999765 67899999987665667899999999999 899999999999999999999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCCC----
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT---- 497 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~~---- 497 (635)
.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 97 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp HHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred HHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 99997533 345899999999999999999999998 99999999999999999999999999987654321
Q ss_pred -CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 498 -PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 498 -~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
..+++.|+|||++.+..++.++||||||+++|||++ |..||......+ +.. ....... ...
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~----~~~~~~~----------~~~ 233 (288)
T 3kfa_A 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYE----LLEKDYR----------MER 233 (288)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH----HHHTTCC----------CCC
T ss_pred CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHhccCC----------CCC
Confidence 224667999999998899999999999999999999 999997654322 111 1111111 011
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
.......+.+++.+|++.||++|||++|+++.|+.+.+..
T Consensus 234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1122346778888999999999999999999999987653
No 98
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.9e-39 Score=334.80 Aligned_cols=258 Identities=25% Similarity=0.393 Sum_probs=204.4
Q ss_pred hhccccccCceEEEEEEec--------CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEE
Q 006696 342 SAEVLGKGSYGTAYKAVLE--------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLL 411 (635)
Q Consensus 342 ~~~~iG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~l 411 (635)
..+.||+|+||.||+|... ++..||+|+++.... ..+.+.+|++++.++.+||||+++++++...+..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 3578999999999999863 466799999976432 235688999999999889999999999999999999
Q ss_pred EeeeccCCChhccccCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCC
Q 006696 412 VYDYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD 480 (635)
Q Consensus 412 v~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~ 480 (635)
||||+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~ 195 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNV 195 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCC
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEEcCCCC
Confidence 99999999999999764321 1234899999999999999999999998 999999999999999999
Q ss_pred eEEeccCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHH
Q 006696 481 GCISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWV 553 (635)
Q Consensus 481 ~ki~DfGla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 553 (635)
+||+|||++....... ...+++.|+|||++.+..++.++||||||+++|||++ |..||...... ...
T Consensus 196 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~ 269 (334)
T 2pvf_A 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE------ELF 269 (334)
T ss_dssp EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHH
T ss_pred EEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH------HHH
Confidence 9999999997654321 2235678999999998889999999999999999999 99999754321 111
Q ss_pred HHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCCCC
Q 006696 554 QSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENR 619 (635)
Q Consensus 554 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 619 (635)
.. +...... .........+.+++.+||+.+|++|||+.|+++.|+.+........
T Consensus 270 ~~-~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~~ 324 (334)
T 2pvf_A 270 KL-LKEGHRM----------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEE 324 (334)
T ss_dssp HH-HHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred HH-HhcCCCC----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccCc
Confidence 11 1111110 0111223467788889999999999999999999999987765543
No 99
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.1e-39 Score=331.68 Aligned_cols=247 Identities=23% Similarity=0.340 Sum_probs=196.0
Q ss_pred hccccccCceEEEEEEecCC--------CeEEEEEeeccc-CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEe
Q 006696 343 AEVLGKGSYGTAYKAVLEES--------TTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~--------~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
.+.||+|+||+||+|..... ..||+|++.... ...+.+.+|++++.++ +||||+++++++..++..++||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL-SHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS-CCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEeCCCCEEEE
Confidence 46799999999999986542 469999987553 3456789999999999 8999999999999999999999
Q ss_pred eeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCC--------eEEec
Q 006696 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD--------GCISD 485 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~--------~ki~D 485 (635)
||+++|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|
T Consensus 92 e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp ECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred ECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999997532 23899999999999999999999998 999999999999998887 99999
Q ss_pred cCCCCCCCCCCCCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccc
Q 006696 486 FGLTPLMNVPATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAE 564 (635)
Q Consensus 486 fGla~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (635)
||++..........+++.|+|||++.+ ..++.++||||||+++|||++|..|+.... ................
T Consensus 165 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-----~~~~~~~~~~~~~~~~- 238 (289)
T 4fvq_A 165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----DSQRKLQFYEDRHQLP- 238 (289)
T ss_dssp CCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHHTTCCCC-
T ss_pred CcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-----chHHHHHHhhccCCCC-
Confidence 999876654444457888999999987 678999999999999999999655443221 1111111111100000
Q ss_pred cchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 565 VFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 565 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
......+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 239 ------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 239 ------------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp ------------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred ------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 011234678888999999999999999999999887543
No 100
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=8.6e-39 Score=325.94 Aligned_cols=254 Identities=17% Similarity=0.183 Sum_probs=197.8
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceec-eeEEEEeCCceEEEeeeccCCC
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVP-LRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~-l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||.||+|.. .+++.||+|++.... ....+.+|++++.++ +|++++. +..++...+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHh-cCCCCCCeeeeecCCCCceEEEEEcc-CCC
Confidence 56899999999999996 467889999876543 234688899999999 5555444 555556777889999999 999
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE---cCCCCeEEeccCCCCCCCCC--
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~ki~DfGla~~~~~~-- 495 (635)
|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 999987432 34999999999999999999999998 9999999999999 78999999999999765332
Q ss_pred ---------CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 496 ---------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 ---------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....+|+.|+|||.+.+..++.++|||||||++|||++|+.||......+.................
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI---- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh----
Confidence 2345788999999999999999999999999999999999999876554443332221111100000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCC
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 616 (635)
.. .. ......+.+++.+||+.||++|||++|+++.|+++.+...
T Consensus 240 ~~---~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 240 EV---LC---KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HH---HT---TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred hh---hh---ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 00 00 0113467788889999999999999999999999987654
No 101
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.3e-41 Score=346.22 Aligned_cols=255 Identities=23% Similarity=0.369 Sum_probs=183.7
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhh-CCCCceeceeEEEEeCC----ceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSKD----EKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~~----~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... ++.||||++... ....+.+|.+++..+ .+||||+++++++.... ..++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 84 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccC
Confidence 468999999999999875 889999998643 356677788888773 38999999999998876 7899999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCceecCCCCCCEEEcCCCCeEEeccCCC
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--------SMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 489 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla 489 (635)
+|+|.++++.. .+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 85 ~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 85 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp TCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred CCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 99999999642 3788889999999999999999 777 999999999999999999999999999
Q ss_pred CCCCCCC--------CCCCCCcccCcccccCC------CCCCccchHhHHHHHHHHHhC----------CCCCCCCCCCC
Q 006696 490 PLMNVPA--------TPSRSAGYRAPEVIETR------KHSHKSDVYSFGVLLLEMLTG----------KAPLQSPTRDD 545 (635)
Q Consensus 490 ~~~~~~~--------~~~~t~~y~aPE~~~~~------~~~~~~DvwS~Gv~l~elltg----------~~p~~~~~~~~ 545 (635)
....... ...+|+.|+|||++.+. .++.++|||||||++|||++| ..||......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7654332 22578999999999776 344689999999999999999 66665432221
Q ss_pred CCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 546 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
.. ............ ...... ......+....+.+++.+||+.||++|||++|+++.|+.+.+..
T Consensus 236 ~~-~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 PS-VEEMRKVVCEQK-LRPNIP----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CC-CC-CHHHHTTSC-CCCCCC----GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred cc-HHHHHHHHHHhh-cCCCcc----ccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 10 001111111111 111111 11112356678899999999999999999999999999887654
No 102
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.4e-39 Score=335.88 Aligned_cols=258 Identities=22% Similarity=0.346 Sum_probs=202.2
Q ss_pred hccccccCceEEEEEEec-----CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeC--CceEEEe
Q 006696 343 AEVLGKGSYGTAYKAVLE-----ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~ 413 (635)
.+.||+|+||+||++.+. +++.||||+++.... ..+.+.+|+++++++ +||||+++++++.+. ...++||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-CCcchhhEEEEEecCCCceEEEEE
Confidence 468999999999998753 577899999976532 245688999999999 899999999999884 5678999
Q ss_pred eeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCC
Q 006696 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 115 e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp CCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred ecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999643 3899999999999999999999998 9999999999999999999999999997764
Q ss_pred CCC-------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCC-----CCC-h--hHHHHHHhh
Q 006696 494 VPA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD-----MVD-L--PRWVQSVVR 558 (635)
Q Consensus 494 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~-----~~~-~--~~~~~~~~~ 558 (635)
... ...++..|+|||++.+..++.++||||||+++|||++|..||....... ... . .........
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 432 2346777999999999899999999999999999999999987432100 000 0 000000010
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCCCCC
Q 006696 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRP 620 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 620 (635)
... ...........+.+++.+||+.||++|||+.|+++.|+.+.+....+.|
T Consensus 266 ~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~~p 317 (318)
T 3lxp_A 266 RGE----------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAP 317 (318)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC---
T ss_pred ccc----------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccCCC
Confidence 000 1111223345678889999999999999999999999999877665544
No 103
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.9e-39 Score=335.58 Aligned_cols=242 Identities=24% Similarity=0.368 Sum_probs=197.3
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCC----HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|.. .+++.||||++...... .+.+.+|++++.++ +||||+++++++...+..++||||+.
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVMEYCL 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeEEEEEecCC
Confidence 46799999999999996 46788999999754332 24678999999999 99999999999999999999999997
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCCC
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 497 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~~ 497 (635)
|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 138 -g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 138 -GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp -EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred -CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 5888887532 234899999999999999999999998 99999999999999999999999999988776667
Q ss_pred CCCCCcccCccccc---CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006696 498 PSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 498 ~~~t~~y~aPE~~~---~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
..+|+.|+|||++. ...++.++|||||||++|||++|+.||..... ............. ... .
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~------~~~~~~~~~~~~~-~~~------~- 275 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNESP-ALQ------S- 275 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSCCC-CCC------C-
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHhcCCC-CCC------C-
Confidence 78999999999984 56789999999999999999999999975431 1122222211111 000 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006696 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 609 (635)
Q Consensus 575 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 609 (635)
......+.+++.+||+.||++|||++|++++-.
T Consensus 276 --~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 276 --GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred --CCCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 112235678888999999999999999998654
No 104
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=341.20 Aligned_cols=242 Identities=22% Similarity=0.354 Sum_probs=192.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||.||+|... ++..||+|+++.... ..+.+.+|++++.++ +||||+++++++...+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 357999999999999964 588999999976532 356788999999999 99999999999999999999999999999
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE--cCCCCeEEeccCCCCCCCCCC--
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI--NQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll--~~~~~~ki~DfGla~~~~~~~-- 496 (635)
|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 173 L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~ 245 (373)
T 2x4f_A 173 LFDRIIDES----YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245 (373)
T ss_dssp EHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence 999886432 34899999999999999999999998 9999999999999 567889999999998664432
Q ss_pred -CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 497 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 -~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....+... .. ...
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~~~~~~~~--~~---~~~- 313 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND------AETLNNILACRWDLE--DE---EFQ- 313 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCCSC--SG---GGT-
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhccCCCC--hh---hhc-
Confidence 34588999999999999999999999999999999999999976432 122233332222110 00 111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 606 (635)
.....+.+++.+||+.||++|||+.|+++
T Consensus 314 --~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 314 --DISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp --TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --cCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 12345678888999999999999999998
No 105
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.8e-39 Score=339.78 Aligned_cols=261 Identities=23% Similarity=0.350 Sum_probs=197.5
Q ss_pred hcccccc--CceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeec
Q 006696 343 AEVLGKG--SYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~iG~G--~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+| +||.||+|+.. +++.||||++...... .+.+.+|+.+++++ +||||+++++++.+++..++||||+
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEECCEEEEEEEcc
Confidence 4689999 99999999976 5889999999866443 34677899999999 8999999999999999999999999
Q ss_pred cCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCC---
Q 006696 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN--- 493 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~--- 493 (635)
++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.+....
T Consensus 109 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 109 AYGSAKDLICTHF---MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp TTCBHHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred CCCCHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 9999999997542 234899999999999999999999998 9999999999999999999999999875321
Q ss_pred --------CCCCCCCCCcccCcccccC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh----
Q 006696 494 --------VPATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE---- 559 (635)
Q Consensus 494 --------~~~~~~~t~~y~aPE~~~~--~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---- 559 (635)
......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.. ..........
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML--LEKLNGTVPCLLDT 260 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH--HHC-----------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHhcCCCCccccc
Confidence 1223357888999999987 67999999999999999999999999865433211 0000000000
Q ss_pred ------cc------------ccccch--------hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHH
Q 006696 560 ------EW------------TAEVFD--------VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEV 611 (635)
Q Consensus 560 ------~~------------~~~~~d--------~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~--L~~~ 611 (635)
.. ...... ......+........+.+++.+||+.||++|||++|++++ ++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 00 000000 0000000112223568889999999999999999999975 5444
Q ss_pred h
Q 006696 612 R 612 (635)
Q Consensus 612 ~ 612 (635)
.
T Consensus 341 ~ 341 (389)
T 3gni_B 341 K 341 (389)
T ss_dssp -
T ss_pred h
Confidence 3
No 106
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.8e-39 Score=332.15 Aligned_cols=252 Identities=24% Similarity=0.336 Sum_probs=197.2
Q ss_pred hccccccCceEEEEEEe-----cCCCeEEEEEeeccc--CCHHHHHHHHHHHHhhCCCCceeceeEEEEeC--CceEEEe
Q 006696 343 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~ 413 (635)
.+.||+|+||.||+|.+ .+++.||+|++.... ...+.+.+|++++.++ +||||+++++++... ...++||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCceEEEEE
Confidence 46899999999999984 357889999997543 2357789999999999 899999999999876 6689999
Q ss_pred eeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCC
Q 006696 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 105 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp ECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999996432 34899999999999999999999998 9999999999999999999999999997664
Q ss_pred CCC-------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCC--------CCCCChhHHHHHHhh
Q 006696 494 VPA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR--------DDMVDLPRWVQSVVR 558 (635)
Q Consensus 494 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~--------~~~~~~~~~~~~~~~ 558 (635)
... ...+|..|+|||++.+..++.++||||||+++|||++|..|+..... ...............
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 332 23467779999999998999999999999999999999998653210 000000000111111
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHh
Q 006696 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 612 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 612 (635)
... ...........+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 258 ~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGK----------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccC----------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 100 11111223356788889999999999999999999999876
No 107
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=335.85 Aligned_cols=242 Identities=21% Similarity=0.327 Sum_probs=182.9
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|.... ++.||||+++... ..+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 135 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEISLVLELVTGGEL 135 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhC-CCCCCcceeeeEecCCeEEEEEEeCCCCCH
Confidence 4679999999999999864 6789999997643 346688899999999 899999999999999999999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC---CCCeEEeccCCCCCCCCC---
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~---~~~~ki~DfGla~~~~~~--- 495 (635)
.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 136 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 207 (349)
T 2w4o_A 136 FDRIVEK-----GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM 207 (349)
T ss_dssp HHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCccccc
Confidence 9998642 34899999999999999999999998 999999999999975 899999999999866433
Q ss_pred CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 496 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+ .....+...... ... +.
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~~i~~~~~~--~~~------~~ 274 (349)
T 2w4o_A 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ-----FMFRRILNCEYY--FIS------PW 274 (349)
T ss_dssp -----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-----HHHHHHHTTCCC--CCT------TT
T ss_pred ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-----HHHHHHHhCCCc--cCC------ch
Confidence 23457899999999999999999999999999999999999997543211 111222211110 000 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.......+.+++.+||+.||++|||+.|++++
T Consensus 275 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 275 WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11223457788889999999999999999874
No 108
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-39 Score=334.32 Aligned_cols=249 Identities=25% Similarity=0.475 Sum_probs=196.3
Q ss_pred hccccccCceEEEEEEecCC-----CeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLEES-----TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~-----~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||.||+|..... ..||+|+++.... ....+.+|+.++.++ +||||+++++++...+..++||||
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCCcEEEEeC
Confidence 46899999999999986532 3599999875432 234688999999999 999999999999999999999999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+++|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 128 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 128 MENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp CTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred CCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999997432 34899999999999999999999998 999999999999999999999999999775432
Q ss_pred C-------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006696 496 A-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 496 ~-------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
. ...++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+. ....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~~~~~~~-~~~~----- 268 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH------EVMKAIN-DGFR----- 268 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHH-TTCC-----
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH------HHHHHHH-CCCc-----
Confidence 2 1124667999999999999999999999999999999 99999754321 1111111 1110
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCC
Q 006696 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 616 (635)
.+........+.+++.+||+.+|++||++.|++++|+++.....
T Consensus 269 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 269 -----LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp -----CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred -----CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 01111233467788899999999999999999999999886543
No 109
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-39 Score=327.06 Aligned_cols=248 Identities=23% Similarity=0.348 Sum_probs=201.2
Q ss_pred ccccccCceEEEEEEec---CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 344 EVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
+.||+|+||.||+|.+. ++..||+|+++.... ..+.+.+|++++.++ +||||+++++++ ..+..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVC-QAEALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEe-cCCCcEEEEEeCCC
Confidence 47999999999999854 567799999976432 345688999999999 999999999999 56678999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC--
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 94 GPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp EEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred CCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 9999999643 234999999999999999999999998 9999999999999999999999999997654321
Q ss_pred -----CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006696 497 -----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 497 -----~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+. ....
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~i~-~~~~-------- 231 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIE-QGKR-------- 231 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH------HHHHHH-TTCC--------
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHh-cCCc--------
Confidence 2235678999999998889999999999999999999 999997654221 111111 1110
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
..........+.+++.+||+.+|++||++.|++++|+.+..+...
T Consensus 232 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 232 --MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp --CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred --CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 011112334677888899999999999999999999999876543
No 110
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-39 Score=329.98 Aligned_cols=251 Identities=23% Similarity=0.358 Sum_probs=198.4
Q ss_pred hccccccCceEEEEEEecCC-C---eEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCce-EEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLEES-T---TVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK-LLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~-~---~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~-~lv~e~ 415 (635)
.++||+|+||+||+|.+.++ . .||+|++..... ..+.+.+|+.+++++ +||||+++++++...+.. ++||||
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEECC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCcEEEEec
Confidence 47899999999999986432 2 689999875433 235688999999999 999999999999876665 999999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+.+|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 105 MCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp CTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred ccCCCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999753 234899999999999999999999998 999999999999999999999999999754321
Q ss_pred --------CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCC-CCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 496 --------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL-QSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 --------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....+++.|+|||.+.+..++.++||||||+++|||++|..|+ ......+ +.. . ......
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~---~~~---~-~~~~~~---- 246 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD---LTH---F-LAQGRR---- 246 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG---HHH---H-HHTTCC----
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH---HHH---H-hhcCCC----
Confidence 2234577899999999999999999999999999999966554 3322211 111 1 111110
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCCC
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 618 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 618 (635)
..........+.+++.+||+.||++|||++|+++.|+++.......
T Consensus 247 ------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 247 ------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred ------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 0011122346778888999999999999999999999998776543
No 111
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=339.12 Aligned_cols=256 Identities=16% Similarity=0.222 Sum_probs=189.8
Q ss_pred hccccccCceEEEEEEec----CCCeEEEEEeecccC------------CHHHHHHHHHHHHhhCCCCceeceeEEEEe-
Q 006696 343 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV------------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS- 405 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~------------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~- 405 (635)
.+.||+|+||.||+|... .+..+|+|++..... ....+.+|+..+..+ +||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~~~~~~~~~ 120 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPLFYGSGLTE 120 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCCEEEEEEEE
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcceeecccccc
Confidence 468999999999999975 467899999875432 122355666777777 99999999999988
Q ss_pred ---CCceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCC--C
Q 006696 406 ---KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL--D 480 (635)
Q Consensus 406 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~--~ 480 (635)
....++||||+ +++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .
T Consensus 121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 121 FKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp SSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTTS
T ss_pred cCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCCc
Confidence 67889999999 999999997432 5999999999999999999999998 99999999999999887 9
Q ss_pred eEEeccCCCCCCCCC-----------CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 006696 481 GCISDFGLTPLMNVP-----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549 (635)
Q Consensus 481 ~ki~DfGla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~ 549 (635)
+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ .
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~ 269 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV--A 269 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH--H
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH--H
Confidence 999999999655321 233578899999999999999999999999999999999999964321110 0
Q ss_pred hHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 550 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 550 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
............. ...............+.+++.+||+.||++|||++++++.|+.+.-..
T Consensus 270 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 330 (345)
T 2v62_A 270 VQTAKTNLLDELP-----QSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPL 330 (345)
T ss_dssp HHHHHHHHHHTTT-----HHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCC
T ss_pred HHHHHHhhccccc-----HHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcc
Confidence 1111111111100 000000000022346788888999999999999999999999876533
No 112
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.6e-39 Score=348.23 Aligned_cols=244 Identities=17% Similarity=0.279 Sum_probs=195.0
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.++||+|+||+||+|+... ++.||+|++++.. .....+.+|..++..+ +||||+++++++.+.+..++||||++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEEEEEecCC
Confidence 4689999999999999865 6789999997532 2234588899999998 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 158 gg~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 158 GGDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp TCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 999999997532 34999999999999999999999998 9999999999999999999999999997654322
Q ss_pred ----CCCCCCcccCccccc-----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006696 497 ----TPSRSAGYRAPEVIE-----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 497 ----~~~~t~~y~aPE~~~-----~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
...||+.|+|||++. ...++.++|||||||++|||++|+.||.+.+.. .....+........
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~------~~~~~i~~~~~~~~--- 301 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHKERFQ--- 301 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHHCC---
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh------HHHHhhhhcccccc---
Confidence 246899999999997 567899999999999999999999999864322 11222221110000
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 006696 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDM--RPNMDEVVRM 607 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPs~~evl~~ 607 (635)
...........+.+++.+|+..+|++ ||+++|++++
T Consensus 302 ----~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 302 ----FPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ----CCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ----CCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00000112335667788999888888 9999999984
No 113
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.8e-39 Score=336.56 Aligned_cols=239 Identities=23% Similarity=0.304 Sum_probs=196.2
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|+... ++.||+|+++... .....+..|..++..+.+||||+++++++.+.+..|+||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 4689999999999999764 6789999997642 2345677888899888789999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC---
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~--- 494 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 105 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 176 (353)
T 2i0e_A 105 GGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176 (353)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc
Confidence 99999999742 24899999999999999999999998 99999999999999999999999999976432
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 495 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 495 -~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+......
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~~~~----------- 239 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIMEHNVA----------- 239 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC-----------
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH------HHHHHHHHhCCCC-----------
Confidence 2345689999999999999999999999999999999999999975432 1222222222111
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPN-----MDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~~ 607 (635)
........+.+++.+||+.||++||+ ++|++++
T Consensus 240 -~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 -YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp -CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred -CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 01122345678888999999999995 5777764
No 114
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6.4e-39 Score=337.45 Aligned_cols=248 Identities=14% Similarity=0.211 Sum_probs=199.4
Q ss_pred hccccccCceEEEEEE------ecCCCeEEEEEeecccCCHHHHHHHHHHHHhhC--CCCceeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAV------LEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG--QHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~--~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||+||+|. ...++.||+|++... ...++..|++++.++. .|+||+++++++...+..++|||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e 147 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence 4679999999999994 446888999998753 4567888888888883 28999999999999999999999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC-----------CCCeEE
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-----------DLDGCI 483 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~-----------~~~~ki 483 (635)
|+++|+|.++++.........+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||
T Consensus 148 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl 224 (365)
T 3e7e_A 148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDDLSAGLAL 224 (365)
T ss_dssp CCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC------CTTEEE
T ss_pred ccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccccccCCEEE
Confidence 999999999997543333456999999999999999999999998 999999999999998 899999
Q ss_pred eccCCCCCCC---C---CCCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHh
Q 006696 484 SDFGLTPLMN---V---PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV 557 (635)
Q Consensus 484 ~DfGla~~~~---~---~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 557 (635)
+|||+++... . .....||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 225 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----------- 293 (365)
T 3e7e_A 225 IDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC----------- 293 (365)
T ss_dssp CCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----------
T ss_pred eeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-----------
Confidence 9999996542 1 1234589999999999999999999999999999999999999964322110
Q ss_pred hhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHHHhhcCCC
Q 006696 558 REEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMR-PNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 558 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~R-Ps~~evl~~L~~~~~~~~~ 617 (635)
. ....+.... ....+.+++..|++.+|.+| |+++++.+.|+.+.+....
T Consensus 294 ----~---~~~~~~~~~----~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~~ 343 (365)
T 3e7e_A 294 ----K---PEGLFRRLP----HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYT 343 (365)
T ss_dssp ----E---ECSCCTTCS----SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHTT
T ss_pred ----e---echhccccC----cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhhh
Confidence 0 001111111 12344567779999999998 6788999999988876543
No 115
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.6e-39 Score=335.20 Aligned_cols=238 Identities=18% Similarity=0.203 Sum_probs=197.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|+.++..+ +||||+++++++.+.+..++||||++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 124 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVA 124 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEEEcCCC
Confidence 468999999999999975 58899999997542 2346788899999999 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC-C
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-A 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-~ 496 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 125 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 125 GGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp TCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 99999999743 24899999999999999999999998 999999999999999999999999999866443 2
Q ss_pred CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006696 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 497 ~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+...... ..
T Consensus 197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~~------------~p 258 (350)
T 1rdq_E 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP------IQIYEKIVSGKVR------------FP 258 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC------------CC
T ss_pred cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH------HHHHHHHHcCCCC------------CC
Confidence 45689999999999999999999999999999999999999975432 1222222222110 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006696 577 EEEMVQMLQIGMACVAKVPDMRPN-----MDEVVRM 607 (635)
Q Consensus 577 ~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~~ 607 (635)
......+.+++.+||+.||++||+ ++|++++
T Consensus 259 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 112345678888999999999998 8888874
No 116
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.5e-39 Score=329.84 Aligned_cols=249 Identities=21% Similarity=0.304 Sum_probs=192.7
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
+.||+|+||+||+|... +++.||||++..... ....+.+|++++.++.+||||+++++++.+.+..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 57999999999999954 688999999976533 4677899999999976899999999999999999999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCC---eEEeccCCCCCCCCC---
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTPLMNVP--- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~---~ki~DfGla~~~~~~--- 495 (635)
.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 99 ~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 99 LSHIHKR-----RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 9999743 24899999999999999999999998 999999999999998776 999999998764321
Q ss_pred --------CCCCCCCcccCcccccC-----CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCCh--------hHHHH
Q 006696 496 --------ATPSRSAGYRAPEVIET-----RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL--------PRWVQ 554 (635)
Q Consensus 496 --------~~~~~t~~y~aPE~~~~-----~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~--------~~~~~ 554 (635)
....+|+.|+|||++.. ..++.++|||||||++|||++|+.||......+.... .....
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 12347889999999975 5588999999999999999999999987654332110 00000
Q ss_pred HHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 555 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 555 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
..+..... ...... . ......+.+++.+||+.||++|||++|++++
T Consensus 251 ~~i~~~~~-~~~~~~---~---~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 251 ESIQEGKY-EFPDKD---W---AHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHCCC-CCCHHH---H---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhccCc-ccCchh---c---ccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11111100 000000 0 1123457788899999999999999999884
No 117
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.9e-39 Score=334.96 Aligned_cols=256 Identities=23% Similarity=0.376 Sum_probs=201.9
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhh-CCCCceeceeEEEEeCC----ceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSKD----EKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~~----~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... ++.||+|++... ....+.+|.+++..+ .+||||+++++++.... ..++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~ 123 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123 (342)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCT
T ss_pred EeeecCCCCcEEEEEEEc-CccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecC
Confidence 578999999999999985 889999998653 346677888888873 38999999999998876 7899999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCceecCCCCCCEEEcCCCCeEEeccCCC
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--------SMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 489 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla 489 (635)
+|+|.+++... .+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||++
T Consensus 124 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 124 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 99999999642 3899999999999999999999 776 999999999999999999999999998
Q ss_pred CCCCCC--------CCCCCCCcccCcccccCCC------CCCccchHhHHHHHHHHHhC----------CCCCCCCCCCC
Q 006696 490 PLMNVP--------ATPSRSAGYRAPEVIETRK------HSHKSDVYSFGVLLLEMLTG----------KAPLQSPTRDD 545 (635)
Q Consensus 490 ~~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~~DvwS~Gv~l~elltg----------~~p~~~~~~~~ 545 (635)
...... ....+|+.|+|||++.+.. ++.++|||||||++|||++| ..||......+
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 665432 2345788999999997753 34689999999999999999 77876543322
Q ss_pred CCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCC
Q 006696 546 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 616 (635)
.....+............. ... ....+....+.+++.+||+.||++|||+.|++++|+.+.+...
T Consensus 275 -~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 275 -PSVEEMRKVVCEQKLRPNI-PNR----WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp -CCHHHHHHHHTTSCCCCCC-CGG----GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred -ccHHHHHHHHHHHHhCCCC-ccc----ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 1222222222222111111 110 1123566778899999999999999999999999999987653
No 118
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=330.91 Aligned_cols=256 Identities=22% Similarity=0.290 Sum_probs=193.4
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccC------CHHHHHHHHHHHHhhC--CCCceeceeEEEEeCC-----c
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV------GKRDFEQQMEIVGRVG--QHPNVVPLRAYYYSKD-----E 408 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~e~~~l~~l~--~h~niv~l~~~~~~~~-----~ 408 (635)
.+.||+|+||+||+|.. .+++.||+|++..... ....+.+|+.+++++. +||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 46799999999999996 4578899999874432 1346778888887774 4999999999998765 4
Q ss_pred eEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCC
Q 006696 409 KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 488 (635)
Q Consensus 409 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGl 488 (635)
.++||||+. |+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAP---PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCC---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred EEEEehhhh-cCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 789999997 59999997543 234899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCC---CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHh---hhccc
Q 006696 489 TPLMNVPAT---PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV---REEWT 562 (635)
Q Consensus 489 a~~~~~~~~---~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 562 (635)
+........ ..+|+.|+|||++.+..++.++|||||||++|||++|+.||......+. +........ ...|.
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~ 244 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ--LGKIFDLIGLPPEDDWP 244 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSC
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCChhhcc
Confidence 987654332 3578999999999999999999999999999999999999976542211 111111000 01111
Q ss_pred cccch--hhhhc--ccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 563 AEVFD--VELMR--FQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 563 ~~~~d--~~~~~--~~~----~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
..... ..... ... ..+....+.+++.+||+.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 245 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp SSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred chhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 10000 00000 000 01223467788889999999999999999874
No 119
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=335.21 Aligned_cols=246 Identities=22% Similarity=0.378 Sum_probs=193.0
Q ss_pred hccccccCceEEEEEEec-CCCe----EEEEEeeccc--CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTT----VVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~----vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|... +++. |++|.+.... ...+.+.+|+.++.++ +||||+++++++... ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~-~~~~v~~~ 97 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESS-SEEEEECC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecC-CceEEEEe
Confidence 468999999999999964 3444 4677665432 2467889999999999 899999999999865 47899999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+.+|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CSSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999997543 34899999999999999999999998 999999999999999999999999999876432
Q ss_pred C------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006696 496 A------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 496 ~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
. ...+++.|+|||++.+..++.++|||||||++|||++ |..||......+. . ..+.....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~---~----~~~~~~~~------ 237 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---S----SILEKGER------ 237 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---H----HHHHTTCC------
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH---H----HHHHcCCC------
Confidence 2 1234667999999999999999999999999999999 9999986543321 1 11111110
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
..........+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 238 ----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 238 ----LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ----CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ----CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 011112234577888999999999999999999999999743
No 120
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=5.8e-39 Score=326.44 Aligned_cols=248 Identities=27% Similarity=0.427 Sum_probs=189.2
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|... ..||+|+++..... .+.+.+|+++++++ +||||+++++++ .....++||||++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 468999999999999865 35999999765443 35688999999999 999999999965 566789999999999
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 105 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 105 SLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 9999996432 34899999999999999999999998 999999999999999999999999998765421
Q ss_pred --CCCCCCCcccCccccc---CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006696 496 --ATPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 496 --~~~~~t~~y~aPE~~~---~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
....+|+.|+|||++. +..++.++||||||+++|||++|+.||......+ ................
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~--- 248 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD------QIIEMVGRGSLSPDLS--- 248 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH------HHHHHHHHTSCCCCTT---
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH------HHHHHhcccccCcchh---
Confidence 1235788999999986 5668889999999999999999999997543211 1111111111110000
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhh
Q 006696 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 613 (635)
. ........+.+++.+||+.+|++|||+.|+++.|+++.+
T Consensus 249 -~--~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 249 -K--VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -S--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -h--ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0 011233567888889999999999999999999998864
No 121
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.7e-39 Score=338.10 Aligned_cols=244 Identities=24% Similarity=0.349 Sum_probs=193.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|... +++.||+|++..... ...+|++++.++.+||||+++++++.+.+..++||||+++|+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L 103 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcH
Confidence 578999999999999976 477899999976532 3457888888887899999999999999999999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCC----CCeEEeccCCCCCCCCC--
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD----LDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~----~~~ki~DfGla~~~~~~-- 495 (635)
.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+.++ +.+||+|||+++.....
T Consensus 104 ~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 104 LDKILRQ-----KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp HHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 9998642 34899999999999999999999998 9999999999998543 35999999999765432
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 496 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 --~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
.+..+|+.|+|||++.+..++.++|||||||++|||++|..||...... ........+........ .
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~~i~~~~~~~~--------~ 244 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD---TPEEILARIGSGKFSLS--------G 244 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS---CHHHHHHHHHHCCCCCC--------S
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC---CHHHHHHHHccCCcccC--------c
Confidence 2456789999999998888999999999999999999999999754322 22222222222211100 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 608 (635)
.........+.+++.+||+.||++|||+.|++++=
T Consensus 245 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 245 GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 00012234567788899999999999999999853
No 122
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.8e-40 Score=339.54 Aligned_cols=280 Identities=18% Similarity=0.293 Sum_probs=200.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC--HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|... +++.||+|++...... ...+.+|++++.++ +||||+++++++...+..++||||++ |
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 467999999999999976 5788999998754322 22455789999999 89999999999999999999999997 4
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC---
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA--- 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~--- 496 (635)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 85 DLKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 8988886532 34899999999999999999999998 9999999999999999999999999987654322
Q ss_pred -CCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh----ccccccchhhh
Q 006696 497 -TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE----EWTAEVFDVEL 570 (635)
Q Consensus 497 -~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~~ 570 (635)
...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+. ...+...... .|.........
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ---LHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChHhchhhhcchhh
Confidence 2356889999999876 5689999999999999999999999986543221 1111111110 01000000000
Q ss_pred hc-------cc----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHHhhcCCCCCCCCccCCCCCCCCCC
Q 006696 571 MR-------FQ----NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVRQSDSENRPSSEENKSKDSNVQT 634 (635)
Q Consensus 571 ~~-------~~----~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~--~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (635)
.. .. ........+.+++.+||+.||++|||++|+++ .+..+.+..............++.+.|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~q~ 311 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTSIFALKEIQLQK 311 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTSSSCTTSCGGGSTTCCCCC
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccccccCCCCCcHhHHHHHHhhh
Confidence 00 00 00112245678889999999999999999998 4555554443433333333445555543
No 123
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.8e-39 Score=351.08 Aligned_cols=244 Identities=23% Similarity=0.276 Sum_probs=199.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... +++.||+|++.... .....+.+|+.++..+ +||||+++++++.+.+..++||||++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmEy~~ 267 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMN 267 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEEEEEEcCC
Confidence 467999999999999975 58899999997542 2356688899999999 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+|+|.+++.... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 268 gg~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 268 GGDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp SCBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 999999987543 234899999999999999999999998 9999999999999999999999999998765432
Q ss_pred --CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006696 497 --TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 497 --~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........+..... .
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~--~~~~i~~~i~~~~~------------~ 407 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERLVKEVPE------------E 407 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC--CHHHHHHHHHHCCC------------C
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch--hHHHHHHHhhcccc------------c
Confidence 3568999999999999999999999999999999999999998654322 11111111111100 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006696 575 NIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 607 (635)
Q Consensus 575 ~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~ 607 (635)
........+.+++.+||+.||++|| +++|++++
T Consensus 408 ~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 408 YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0011234567888899999999999 78999874
No 124
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.2e-38 Score=330.15 Aligned_cols=255 Identities=23% Similarity=0.403 Sum_probs=202.1
Q ss_pred hccccccCceEEEEEEecC-CCe--EEEEEeeccc--CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STT--VVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~--vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|.... +.. +++|+++... ...+.+.+|++++.++.+||||+++++++.+.+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 5789999999999999654 443 4899887542 2346788999999999889999999999999999999999999
Q ss_pred CCChhccccCCC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEecc
Q 006696 418 SGSLSTLLHGNR-----------GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDF 486 (635)
Q Consensus 418 ~g~L~~~l~~~~-----------~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~Df 486 (635)
+|+|.+++.... ......+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kL~Df 186 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADF 186 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCT
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeEEEccc
Confidence 999999997543 012345899999999999999999999998 999999999999999999999999
Q ss_pred CCCCCCCCC---CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006696 487 GLTPLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 487 Gla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
|+++..... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ...... .....
T Consensus 187 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~~~~~~-~~~~~ 259 (327)
T 1fvr_A 187 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------ELYEKL-PQGYR 259 (327)
T ss_dssp TCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHG-GGTCC
T ss_pred CcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH------HHHHHh-hcCCC
Confidence 998754322 22345778999999998889999999999999999998 99999754321 111111 11110
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 563 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
. .........+.+++.+||+.||++|||++|++++|+.+.+....
T Consensus 260 ~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 260 L----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp C----------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred C----------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 0 01112234577888899999999999999999999999976644
No 125
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-39 Score=338.47 Aligned_cols=243 Identities=21% Similarity=0.373 Sum_probs=197.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||.||+|... +++.||+|++..... ....+.+|++++..+ +||||+++++++.+.+..++||||+++|+
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~gg~ 134 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEFLSGGE 134 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCEEEEEEEcCCCCc
Confidence 468999999999999975 577899999875432 345788999999999 99999999999999999999999999999
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC--CCCeEEeccCCCCCCCCCC--
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ--DLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~--~~~~ki~DfGla~~~~~~~-- 496 (635)
|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||++.......
T Consensus 135 L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 135 LFDRIAAE----DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp HHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred HHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 99998743 234899999999999999999999998 999999999999974 4789999999998765432
Q ss_pred -CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 497 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 -~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...+|+.|+|||++.+..++.++|||||||++|||++|..||..... ......+....+.. +. ..
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------~~~~~~i~~~~~~~---~~-----~~ 273 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD------LETLQNVKRCDWEF---DE-----DA 273 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHHCCCCC---CS-----ST
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCC---Cc-----cc
Confidence 23588999999999999999999999999999999999999975432 11222222221110 00 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.......+.+++.+||+.||++|||+.|++++
T Consensus 274 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 11223456788889999999999999999985
No 126
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.8e-39 Score=339.64 Aligned_cols=265 Identities=16% Similarity=0.248 Sum_probs=207.6
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc--CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCC--ceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~e~~~ 417 (635)
.++||+|+||+||+|.... ++.||||++.... ...+.+.+|++++.++ +||||+++++++...+ ..++||||++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 4689999999999999764 7899999997643 3456788999999999 8999999999998765 6799999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE----cCCCCeEEeccCCCCCCC
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI----NQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll----~~~~~~ki~DfGla~~~~ 493 (635)
+|+|.+++..... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 93 ~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp TEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999975432 233899999999999999999999998 9999999999999 777889999999997664
Q ss_pred CCC---CCCCCCcccCcccccC--------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006696 494 VPA---TPSRSAGYRAPEVIET--------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 494 ~~~---~~~~t~~y~aPE~~~~--------~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..............
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~p~ 245 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPS 245 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHHHHHHHHSCCT
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHHHHHHhcCCCc
Confidence 432 3457899999999865 5678899999999999999999999975433221 12222222222111
Q ss_pred ccc------------chhhhh-cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 563 AEV------------FDVELM-RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 563 ~~~------------~d~~~~-~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
... +..... ...........+.+++.+||+.||++||+++|+++.++.+.+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 000 000000 11122456677888999999999999999999999999988653
No 127
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.2e-38 Score=324.61 Aligned_cols=251 Identities=22% Similarity=0.338 Sum_probs=191.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|... +++.||+|++...... ...+.+|+.++.++ +||||+++++++.+++..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 467999999999999975 4788999999765432 35678899999999 899999999999999999999999986
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC---
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
++.+.+... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 86 -~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 86 -DLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp -EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred -CHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 565555432 234999999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCcccccCCC-CCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh---h----ccccccc
Q 006696 496 -ATPSRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR---E----EWTAEVF 566 (635)
Q Consensus 496 -~~~~~t~~y~aPE~~~~~~-~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~ 566 (635)
....+|+.|+|||++.+.. ++.++|||||||++|||++|..||.... +.......+.. . .|.....
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~ 232 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEEQWPSMTK 232 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS-----SHHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC-----CHHHHHHHHHHHhCCCChhhhhhhcc
Confidence 2345788999999998766 7999999999999999999988864322 11111111111 0 0000000
Q ss_pred --h--------hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 567 --D--------VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 --d--------~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
+ ...............+.+++.+|++.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 0000000011233456788889999999999999999874
No 128
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.1e-39 Score=333.76 Aligned_cols=256 Identities=27% Similarity=0.382 Sum_probs=203.0
Q ss_pred hccccccCceEEEEEEe------cCCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCC-ceEEEe
Q 006696 343 AEVLGKGSYGTAYKAVL------EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD-EKLLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-~~~lv~ 413 (635)
.+.||+|+||.||+|.. .+++.||+|+++.... ..+.+.+|+.++.++.+||||+++++++...+ ..++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 57899999999999984 2457899999976533 23568899999999988999999999988765 489999
Q ss_pred eeccCCChhccccCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeE
Q 006696 414 DYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC 482 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~k 482 (635)
||+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~k 188 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVK 188 (316)
T ss_dssp ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEE
Confidence 999999999999754321 0223889999999999999999999998 99999999999999999999
Q ss_pred EeccCCCCCCCCCCC------CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHH
Q 006696 483 ISDFGLTPLMNVPAT------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQS 555 (635)
Q Consensus 483 i~DfGla~~~~~~~~------~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 555 (635)
|+|||++........ ..+++.|+|||++.+..++.++||||||+++|||++ |..||......+ ....
T Consensus 189 l~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~ 262 (316)
T 2xir_A 189 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCR 262 (316)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH------HHHH
T ss_pred ECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH------HHHH
Confidence 999999986643322 235678999999999999999999999999999998 999997654221 1111
Q ss_pred HhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 556 VVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 556 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
......... ........+.+++.+||+.||++|||+.|++++|+.+.+....
T Consensus 263 ~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 314 (316)
T 2xir_A 263 RLKEGTRMR----------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 314 (316)
T ss_dssp HHHHTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HhccCccCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcc
Confidence 111111100 0111234577888899999999999999999999999876543
No 129
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.1e-39 Score=334.36 Aligned_cols=257 Identities=21% Similarity=0.356 Sum_probs=187.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||+|... +++.||+|+++.... ....+.+|+++++++ +||||+++++++..++..++||||++ |
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~-~ 87 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTLVFEFMD-N 87 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEEEEECCC-C
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEEEEEecC-C
Confidence 467999999999999965 578899999975432 346788999999999 99999999999999999999999998 5
Q ss_pred ChhccccCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC---
Q 006696 420 SLSTLLHGNRG-AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 420 ~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
+|.+++..... .....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 88 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (317)
T 2pmi_A 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164 (317)
T ss_dssp BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC
T ss_pred CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecCCCccc
Confidence 99998864321 12235899999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh----cccc----cc
Q 006696 496 -ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE----EWTA----EV 565 (635)
Q Consensus 496 -~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~ 565 (635)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. ...+...... .|.. ..
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ---LKLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCChhHhhhhhhhhh
Confidence 23457889999999976 4689999999999999999999999986542211 1111111100 0000 00
Q ss_pred chhhhh-----------cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 566 FDVELM-----------RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 566 ~d~~~~-----------~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
+..... ...........+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000000 000001123467888999999999999999999874
No 130
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.8e-38 Score=336.62 Aligned_cols=241 Identities=20% Similarity=0.317 Sum_probs=191.3
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---HHHHHHHHHHHHhhCC-CCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQ-HPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||++...+++.||||++...... .+.+.+|+.++.++.+ ||||+++++++..++..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 4689999999999999888999999999765433 3568899999999954 7999999999999999999999 568
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC---
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 140 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 140 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp EEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 8999999743 24889999999999999999999998 99999999999995 589999999999876432
Q ss_pred ---CCCCCCCcccCcccccC-----------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006696 496 ---ATPSRSAGYRAPEVIET-----------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 496 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ..............
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~~~~~~~~ 285 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNH 285 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHCTTS
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-----HHHHHHHHHhCccc
Confidence 23458999999999865 368899999999999999999999997432 11122222222111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006696 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 608 (635)
.... + ......+.+++.+||+.||++|||+.|++++-
T Consensus 286 ~~~~--------~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 286 EIEF--------P--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp CCCC--------C--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cCCC--------C--ccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 1000 0 01124567888899999999999999999753
No 131
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.5e-39 Score=328.61 Aligned_cols=250 Identities=25% Similarity=0.395 Sum_probs=196.1
Q ss_pred hccccccCceEEEEEEecCC----CeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEe-CCceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLEES----TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS-KDEKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~----~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|...++ ..+|+|.+..... ..+.+.+|+.+++++ +||||+++++++.. ++..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCCceEEEEeC
Confidence 46899999999999986432 2578888875432 235688999999999 89999999998654 5578999999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 109 ~~~~~L~~~l~~~----~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 109 MKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp CTTCBHHHHHHCT----TCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccccccc
Confidence 9999999999743 234899999999999999999999998 999999999999999999999999999765432
Q ss_pred --------CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 496 --------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 --------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....+++.|+|||.+.+..++.++||||||+++|||++ |.+||......+ .. .........
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~---~~~~~~~~~---- 251 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---IT---VYLLQGRRL---- 251 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HH---HHHHTTCCC----
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HH---HHHhcCCCC----
Confidence 12335678999999999999999999999999999999 556665443322 11 111111100
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.........+.+++.+||+.+|++|||+.|+++.|+++......
T Consensus 252 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 252 -------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred -------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 00111234577888899999999999999999999999876544
No 132
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=325.29 Aligned_cols=239 Identities=22% Similarity=0.420 Sum_probs=177.2
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.++.++ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVYLVLEMCH 94 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEEEEEecCC
Confidence 46799999999999997 468899999997542 2246788999999999 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 95 NGEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp TEEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred CCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 999999997432 35899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ---CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 497 ---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 497 ---~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
...+++.|+|||.+.+..++.++||||||+++|||++|+.||......+... .......
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~~~~~~------------ 229 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN------KVVLADY------------ 229 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCSSCC------------
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH------HHhhccc------------
Confidence 3457889999999999899999999999999999999999998654332211 1000000
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.........+.+++.+||+.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 230 EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0011123456788889999999999999999873
No 133
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=6.9e-39 Score=331.85 Aligned_cols=238 Identities=22% Similarity=0.342 Sum_probs=188.1
Q ss_pred hccccccCceEEEEEEe----cCCCeEEEEEeecccC-----CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEe
Q 006696 343 AEVLGKGSYGTAYKAVL----EESTTVVVKRLKEVVV-----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~-----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
.+.||+|+||.||+++. .+++.||+|+++.... ....+.+|+.++.++ +||||+++++++...+..++||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 100 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTGGKLYLIL 100 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEEECSSCEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEEEcCCEEEEEE
Confidence 46899999999999997 4688999999976532 234577899999999 8999999999999999999999
Q ss_pred eeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCC
Q 006696 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 101 EYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp ECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred eCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 999999999999642 24889999999999999999999998 9999999999999999999999999987643
Q ss_pred CC----CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 006696 494 VP----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 569 (635)
Q Consensus 494 ~~----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 569 (635)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+......
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~~~~~------- 239 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK------KTIDKILKCKLN------- 239 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCCC-------
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCCCC-------
Confidence 22 2345889999999999999999999999999999999999999754321 122222221110
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006696 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 607 (635)
Q Consensus 570 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~ 607 (635)
........+.+++.+||+.||++|| ++.|++++
T Consensus 240 -----~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 240 -----LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp -----CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred -----CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 0011234567888899999999999 78888874
No 134
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.9e-39 Score=331.36 Aligned_cols=256 Identities=21% Similarity=0.330 Sum_probs=193.8
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCC----HHHHHHHHHHHHhhCCCCceeceeEEEEeCCce----EEEe
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK----LLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~----~lv~ 413 (635)
.+.||+|+||.||+|.. .+++.||||++...... ...+.+|++++.++ +||||+++++++...... ++||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~lv~ 95 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVM 95 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccCCCCcccEEEE
Confidence 46899999999999996 46788999999765332 24577888888888 999999999998876544 9999
Q ss_pred eeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCC
Q 006696 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++|+|.++++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 96 e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 96 EYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp ECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred ecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 999999999999742 24899999999999999999999998 9999999999999999999999999997654
Q ss_pred CCC-------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 494 VPA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 494 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
... ...+|+.|+|||++.+..++.++||||||+++|||++|+.||...... ............
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~~~---- 237 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV------SVAYQHVREDPI---- 237 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHCCCC----
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhcCCCC----
Confidence 321 234789999999999999999999999999999999999999754321 111111111110
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHH-HHHHHHHHhhcCCCCCCC
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDE-VVRMIEEVRQSDSENRPS 621 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~e-vl~~L~~~~~~~~~~~~~ 621 (635)
.... ... .....+.+++.+||+.||++||++.+ +.+.+..+........+.
T Consensus 238 ~~~~-~~~---~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~ 289 (311)
T 3ork_A 238 PPSA-RHE---GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPK 289 (311)
T ss_dssp CHHH-HST---TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCSSCC
T ss_pred Cccc-ccC---CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCCCCc
Confidence 0000 001 12345778888999999999997555 445666666555444443
No 135
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=344.06 Aligned_cols=242 Identities=17% Similarity=0.270 Sum_probs=193.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC----CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+++.. +++.||+|++.+... ....+.+|..++..+ +||||+++++++.+.+..|+||||++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lVmE~~~ 144 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLYLVMEYYV 144 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence 468999999999999975 588999999975321 234578899999988 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 145 gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 145 GGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp SCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 999999997432 24899999999999999999999998 9999999999999999999999999997664332
Q ss_pred ----CCCCCCcccCccccc-------CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 006696 497 ----TPSRSAGYRAPEVIE-------TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 565 (635)
Q Consensus 497 ----~~~~t~~y~aPE~~~-------~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (635)
...||+.|+|||++. ...++.++|||||||++|||++|+.||...+.. .....+.......
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~~~~~-- 289 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA------ETYGKIVHYKEHL-- 289 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHHC--
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH------HHHHHHHhcccCc--
Confidence 346899999999997 456899999999999999999999999764322 1122222111000
Q ss_pred chhhhhcccC-hHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 006696 566 FDVELMRFQN-IEEEMVQMLQIGMACVAKVPDMR---PNMDEVVRM 607 (635)
Q Consensus 566 ~d~~~~~~~~-~~~~~~~l~~li~~Cl~~dP~~R---Ps~~evl~~ 607 (635)
..+. .......+.+++.+||+ +|++| |+++|++++
T Consensus 290 ------~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 290 ------SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ------CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ------CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0000 01123456778889999 99998 689999874
No 136
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.1e-38 Score=322.51 Aligned_cols=239 Identities=25% Similarity=0.372 Sum_probs=194.0
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|.... +..||+|++.... .....+.+|+.++.++ +||||+++++++.+.+..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAP 92 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecCCEEEEEEecCC
Confidence 4689999999999998764 6689999986542 2356788899999999 89999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC--
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 93 ~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 93 LGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 99999998643 24899999999999999999999998 999999999999999999999999988665433
Q ss_pred CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 496 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
....+++.|+|||.+.+..++.++||||||+++|||++|..||...... ........... ..
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~------------~~ 226 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEF------------TF 226 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCC------------CC
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH------HHHHHHHhCCC------------CC
Confidence 2345789999999999999999999999999999999999999754321 11111111110 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 608 (635)
.......+.+++.+||+.||++|||++|++++-
T Consensus 227 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 227 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred CCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 111234567888899999999999999999964
No 137
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.5e-39 Score=336.88 Aligned_cols=258 Identities=24% Similarity=0.363 Sum_probs=198.6
Q ss_pred hccccccCceEEEEEEe-----cCCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEe--CCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~e 414 (635)
.+.||+|+||.||+|++ .++..||||++..... ..+.+.+|++++.++ +||||+++++++.. ....++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCCceEEEEEe
Confidence 57899999999999984 3577899999876532 245688999999999 99999999999874 456889999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 107 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp CCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred ecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999997532 24899999999999999999999998 99999999999999999999999999976543
Q ss_pred CC-------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCC--------CCCChhHHHHHHhhh
Q 006696 495 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD--------DMVDLPRWVQSVVRE 559 (635)
Q Consensus 495 ~~-------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~--------~~~~~~~~~~~~~~~ 559 (635)
.. ...++..|+|||++.+..++.++||||||+++|||++|..||...... ...............
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 22 234677799999999988999999999999999999999998643211 000000111111111
Q ss_pred ccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCCC
Q 006696 560 EWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 618 (635)
Q Consensus 560 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 618 (635)
.. ...........+.+++.+||+.||++|||++|++++|+.+.......
T Consensus 260 ~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 260 GQ----------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp TC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred cc----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 10 11111233456788889999999999999999999999998666543
No 138
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=332.09 Aligned_cols=241 Identities=21% Similarity=0.324 Sum_probs=189.6
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCC-CceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQH-PNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h-~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||++...+++.||||++...... .+.+.+|+.++.++.+| +||+++++++..++..++||| +.+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCC
Confidence 4689999999999999988999999999765443 35688899999999433 999999999999999999999 567
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC--
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 93 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 93 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp EEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 8999999743 34899999999999999999999998 99999999999997 6789999999998764332
Q ss_pred ----CCCCCCcccCcccccC-----------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006696 497 ----TPSRSAGYRAPEVIET-----------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 497 ----~~~~t~~y~aPE~~~~-----------~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
...||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ..............
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNH 238 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHCTTS
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----hHHHHHHHHhcCCc
Confidence 3458999999999864 678899999999999999999999997432 11112222221111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006696 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 608 (635)
.... .......+.+++.+||+.||++|||+.|++++-
T Consensus 239 ~~~~----------~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 239 EIEF----------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp CCCC----------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccCC----------cccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 1100 011123567888899999999999999999864
No 139
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.3e-38 Score=327.63 Aligned_cols=254 Identities=23% Similarity=0.403 Sum_probs=193.1
Q ss_pred hhccccccCceEEEEEEecC----CCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCc-----e
Q 006696 342 SAEVLGKGSYGTAYKAVLEE----STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-----K 409 (635)
Q Consensus 342 ~~~~iG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-----~ 409 (635)
..+.||+|+||.||+|.... +..||+|+++..... .+.+.+|+.++.++ +||||+++++++...+. .
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~ 116 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQGIPKP 116 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEC-------CE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-CCCCeeeeeEEEeeccccCCccc
Confidence 35789999999999998643 347999998765433 35688899999999 89999999999987653 4
Q ss_pred EEEeeeccCCChhccccCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCC
Q 006696 410 LLVYDYFASGSLSTLLHGNR-GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 488 (635)
Q Consensus 410 ~lv~e~~~~g~L~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGl 488 (635)
++||||+++|+|.+++.... ......+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 117 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~Dfg~ 193 (313)
T 3brb_A 117 MVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGL 193 (313)
T ss_dssp EEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEECSCSC
T ss_pred EEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEeecCc
Confidence 99999999999999984322 122346999999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCC------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006696 489 TPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 489 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
+....... ...+++.|+|||.+.+..++.++||||||+++|||++ |..||......+. ........
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~------~~~~~~~~- 266 (313)
T 3brb_A 194 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM------YDYLLHGH- 266 (313)
T ss_dssp C----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH------HHHHHTTC-
T ss_pred ceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH------HHHHHcCC-
Confidence 97654321 2335678999999999999999999999999999999 8899976543221 11111111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCC
Q 006696 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 616 (635)
. ..........+.+++.+||+.||++|||+.+++++|+.+.+..+
T Consensus 267 ~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 267 R----------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp C----------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred C----------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 0 01111233467888899999999999999999999999987654
No 140
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=334.84 Aligned_cols=253 Identities=23% Similarity=0.371 Sum_probs=184.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEe--------CCceEEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--------KDEKLLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--------~~~~~lv 412 (635)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++.++.+||||+++++++.. ....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 578999999999999964 578999999865432 345688999999999669999999999953 2347899
Q ss_pred eeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCC
Q 006696 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+. |+|.+++..... ...+++..+..++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+|||++...
T Consensus 113 ~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 188 (337)
T 3ll6_A 113 TELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188 (337)
T ss_dssp EECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTTCBCC
T ss_pred EEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCccceec
Confidence 99996 699998864321 235999999999999999999999975 45999999999999999999999999999776
Q ss_pred CCCC----------------CCCCCCcccCcccc---cCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHH
Q 006696 493 NVPA----------------TPSRSAGYRAPEVI---ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWV 553 (635)
Q Consensus 493 ~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 553 (635)
.... ...+|+.|+|||++ .+..++.++|||||||++|||++|+.||.........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~------ 262 (337)
T 3ll6_A 189 SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV------ 262 (337)
T ss_dssp SSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred cccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh------
Confidence 4322 23378889999998 5667889999999999999999999999754322111
Q ss_pred HHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCCCC
Q 006696 554 QSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENR 619 (635)
Q Consensus 554 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 619 (635)
...... .........+.+++.+||+.||++|||+.|++++|+.+.+......
T Consensus 263 ----~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~~ 314 (337)
T 3ll6_A 263 ----NGKYSI----------PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNP 314 (337)
T ss_dssp -------CCC----------CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCCT
T ss_pred ----cCcccC----------CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCCC
Confidence 000000 0000111236678889999999999999999999999987765543
No 141
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.7e-39 Score=326.46 Aligned_cols=247 Identities=23% Similarity=0.379 Sum_probs=197.0
Q ss_pred hccccccCceEEEEEEecCC----CeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeec
Q 006696 343 AEVLGKGSYGTAYKAVLEES----TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~----~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+|+||.||+|...+. ..||+|++..... ..+.+.+|+.++.++ +||||+++++++.+ +..++||||+
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCCEEEEecC
Confidence 56899999999999986532 3599999876532 346788999999999 99999999999764 5678999999
Q ss_pred cCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC
Q 006696 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 496 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~ 496 (635)
++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 95 PYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp TTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred CCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999997432 34899999999999999999999998 9999999999999999999999999987654332
Q ss_pred -----CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006696 497 -----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 497 -----~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ... .......
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~---~~~~~~~--------- 232 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIG---VLEKGDR--------- 232 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHH---HHHHTCC---------
T ss_pred ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHH---HHhcCCC---------
Confidence 2335678999999998899999999999999999998 999997544322 111 1111110
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
..........+.+++.+||+.||++|||+.|++++|+.+.+..
T Consensus 233 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 233 --LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 0011112345778888999999999999999999999987643
No 142
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.5e-39 Score=325.33 Aligned_cols=243 Identities=21% Similarity=0.383 Sum_probs=196.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEe----------------
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS---------------- 405 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~---------------- 405 (635)
.+.||+|+||.||+|... +++.||+|++... ...+.+|++++.++ +||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN---NEKAEREVKALAKL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECC---SGGGHHHHHHHHHC-CCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEeccc---cHHHHHHHHHHHhC-CCCCEEEEeeeEeccccCcccccccccccC
Confidence 578999999999999976 6889999998754 35678899999999 99999999999864
Q ss_pred CCceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEec
Q 006696 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485 (635)
Q Consensus 406 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~D 485 (635)
....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECC
T ss_pred cceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEEECc
Confidence 345789999999999999997543 234899999999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCC---CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006696 486 FGLTPLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 486 fGla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
||++...... ....+++.|+|||++.+..++.++||||||+++|||++|..|+... ....... .....
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~~~~~~-~~~~~ 236 (284)
T 2a19_B 166 FGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SKFFTDL-RDGII 236 (284)
T ss_dssp CTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HHHHHHH-HTTCC
T ss_pred chhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HHHHHHh-hcccc
Confidence 9998765443 2345788999999999999999999999999999999999887421 1111111 11111
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 563 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.. .....+.+++.+||+.||++|||+.|++++|+.+......
T Consensus 237 ~~-------------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 237 SD-------------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp CT-------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred cc-------------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 00 1123467788899999999999999999999999865544
No 143
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8e-39 Score=331.41 Aligned_cols=245 Identities=17% Similarity=0.285 Sum_probs=196.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|... +++.||+|+++.... ....+.+|+.++.++.+||||+++++++...+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~ 113 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCC
Confidence 378999999999999976 588999999976543 3567889999999997889999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC---CCCeEEeccCCCCCCCCC
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~---~~~~ki~DfGla~~~~~~ 495 (635)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++......
T Consensus 114 ~~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 114 GEIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp EEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred CcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 99999986432 245999999999999999999999998 999999999999998 789999999999766443
Q ss_pred C---CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 496 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ~---~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
. ...+++.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+..... ...
T Consensus 188 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~--~~~------ 253 (327)
T 3lm5_A 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE------TYLNISQVNV--DYS------ 253 (327)
T ss_dssp ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCC--CCC------
T ss_pred cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH------HHHHHHhccc--ccC------
Confidence 2 3458899999999999999999999999999999999999997643211 1111111100 000
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
..........+.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 254 EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 00111223457788889999999999999999885
No 144
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.4e-39 Score=362.03 Aligned_cols=244 Identities=24% Similarity=0.347 Sum_probs=197.2
Q ss_pred ccccccCceEEEEEEec---CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 344 EVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
+.||+|+||.||+|.+. .++.||||+++..... .+++.+|++++.++ +|||||++++++. .+..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-~~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICE-AESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEE-SSSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCCEEEEEEccC
Confidence 47999999999999753 3567999999865432 46799999999999 8999999999986 456889999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 453 ~g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 453 LGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp TEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred CCCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 99999999642 34899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 006696 497 ------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 569 (635)
Q Consensus 497 ------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 569 (635)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+ +...+......
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-------~~~~i~~~~~~------ 591 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKGERM------ 591 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------HHHHHHTTCCC------
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCCCC------
Confidence 1224677999999999999999999999999999998 999998654321 11111111111
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 570 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
.........+.+++.+||+.||++||+++++++.|+++...
T Consensus 592 ----~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 592 ----GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 11122345678888999999999999999999999988643
No 145
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=331.16 Aligned_cols=253 Identities=20% Similarity=0.318 Sum_probs=191.9
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|.... ++.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLHLVFEYCDH 86 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEEEEEEeCCC
Confidence 4679999999999999764 788999998765433 35577899999999 899999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC--
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 87 ~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 87 TVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp EHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred chHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999887642 34899999999999999999999998 9999999999999999999999999997654322
Q ss_pred --CCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh------------hcc
Q 006696 497 --TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR------------EEW 561 (635)
Q Consensus 497 --~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~------------~~~ 561 (635)
...+++.|+|||++.+ ..++.++||||||+++|||++|+.||.+....+.. ........ ..+
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL---YLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCSCCHHHHHHHHTCGG
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhcccccccccccccccc
Confidence 3357888999999976 56899999999999999999999999765432211 11111110 000
Q ss_pred ccccchhhhhcccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 562 TAEVFDVELMRFQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 562 ~~~~~d~~~~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
......+....... .......+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000000000000 01223457788999999999999999999974
No 146
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-38 Score=336.06 Aligned_cols=254 Identities=21% Similarity=0.359 Sum_probs=185.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCC--ceEEEeeec
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYDYF 416 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~e~~ 416 (635)
.+.||+|+||.||+|... +++.||||++...... ...+.+|+.++.++.+||||+++++++...+ ..|+||||+
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 468999999999999964 5789999998755332 3457789999999966999999999998654 689999999
Q ss_pred cCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC--
Q 006696 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV-- 494 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~-- 494 (635)
+ |+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 94 E-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp S-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred C-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 8 5899988642 4899999999999999999999998 99999999999999999999999999975422
Q ss_pred -----------------------CCCCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChh
Q 006696 495 -----------------------PATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLP 550 (635)
Q Consensus 495 -----------------------~~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~ 550 (635)
.....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~----- 238 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN----- 238 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH-----
Confidence 112357888999999976 678999999999999999999999998654221
Q ss_pred HHHHHHhhh---cc-----------------------------ccccch---hhhhcccChHHHHHHHHHHHHHcccCCC
Q 006696 551 RWVQSVVRE---EW-----------------------------TAEVFD---VELMRFQNIEEEMVQMLQIGMACVAKVP 595 (635)
Q Consensus 551 ~~~~~~~~~---~~-----------------------------~~~~~d---~~~~~~~~~~~~~~~l~~li~~Cl~~dP 595 (635)
....+... .. ....+. ...............+.+++.+||+.||
T Consensus 239 -~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 239 -QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp -HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred -HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 11111100 00 000000 0000000000123457888999999999
Q ss_pred CCCCCHHHHHHH--HHHHh
Q 006696 596 DMRPNMDEVVRM--IEEVR 612 (635)
Q Consensus 596 ~~RPs~~evl~~--L~~~~ 612 (635)
++|||++|++++ +..+.
T Consensus 318 ~~R~t~~e~l~Hp~~~~~~ 336 (388)
T 3oz6_A 318 NKRISANDALKHPFVSIFH 336 (388)
T ss_dssp GGSCCHHHHTTSTTTTTTC
T ss_pred ccCCCHHHHhCCHHHHHhc
Confidence 999999999986 55444
No 147
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.5e-38 Score=342.93 Aligned_cols=254 Identities=19% Similarity=0.234 Sum_probs=201.8
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.++||+|+||.||+|.. .+++.||||++.... ....+.+|++++..+.+|+++..+..++...+..++||||+ +++|
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 46799999999999996 458899999876543 23568899999999966688888888888888999999999 8999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE---cCCCCeEEeccCCCCCCCCCC--
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~ki~DfGla~~~~~~~-- 496 (635)
.+++.... ..+++..++.|+.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 90 ~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 90 EDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 99997432 34999999999999999999999998 9999999999999 688999999999997654322
Q ss_pred ---------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006696 497 ---------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 497 ---------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||........... ...+...... ....
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~---~~~i~~~~~~-~~~~ 238 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK---YEKISEKKVA-TSIE 238 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHH---HHHHHHHHHH-SCHH
T ss_pred cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHH---HHHHhhcccc-ccHH
Confidence 34578899999999999999999999999999999999999987554332211 1111111110 0000
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
... ......+.+++..||+.+|++||++.+|++.|+++....
T Consensus 239 ~l~------~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 239 ALC------RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HHH------TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHh------cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 000 112346788889999999999999999999999987544
No 148
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.6e-38 Score=346.10 Aligned_cols=244 Identities=20% Similarity=0.302 Sum_probs=198.1
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
+.||+|+||.||+|+.. +++.||+|++.... .....+.+|+.++.++ +||||+++++++...+..|+||||+++
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 56999999999999975 58899999997543 2346788899999999 999999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC--
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
|+|.+++..... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 270 g~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 270 GDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp CBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 999999875432 2345999999999999999999999998 9999999999999999999999999997654332
Q ss_pred --CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006696 497 --TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 497 --~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........+......
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~~i~~~~~~------------ 411 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQRVLEQAVT------------ 411 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHHHHHHCCCC------------
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHHHHhhcccC------------
Confidence 2468999999999999999999999999999999999999998654221 222222222221110
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 006696 575 NIEEEMVQMLQIGMACVAKVPDMRPNM-----DEVVR 606 (635)
Q Consensus 575 ~~~~~~~~l~~li~~Cl~~dP~~RPs~-----~evl~ 606 (635)
........+.+++.+||+.||++||++ +|+++
T Consensus 412 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 412 YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 011223456778889999999999975 66765
No 149
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.5e-38 Score=323.95 Aligned_cols=256 Identities=20% Similarity=0.364 Sum_probs=195.3
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccC----CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|.. .+++.||+|++..... ....+.+|+.++.++ +||||+++++++...+..++||||++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 115 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELAD 115 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcEEEEEecCC
Confidence 56899999999999996 4688999999975322 235678899999999 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+|+|.+++..... ....+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 116 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 116 AGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp SCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred CCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 9999999864321 1345899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ---CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 497 ---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 497 ---~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
...+++.|+|||++.+..++.++||||||+++|||++|+.||..... ................ ..
T Consensus 192 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~-~~------- 259 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEQCDYPP-LP------- 259 (310)
T ss_dssp -------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C----CHHHHHHHHHTTCSCC-CC-------
T ss_pred cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----hHHHHHHHhhcccCCC-Cc-------
Confidence 23578899999999999999999999999999999999999975432 2222222222111110 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.......+.+++.+||+.||++|||+.|++++|+.+......
T Consensus 260 --~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 260 --SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp --TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred --ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 011234577888899999999999999999999999877644
No 150
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=334.07 Aligned_cols=232 Identities=22% Similarity=0.314 Sum_probs=192.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---------CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
.+.||+|+||.||+|... +++.||||++..... ....+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv 107 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFENQGFFQLV 107 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEeeCCEEEEE
Confidence 578999999999999964 578899999976532 233577899999999 999999999999999999999
Q ss_pred eeeccCC-ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCC
Q 006696 413 YDYFASG-SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL 491 (635)
Q Consensus 413 ~e~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~ 491 (635)
|||+.+| +|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 108 ~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 9999777 999998743 34999999999999999999999998 99999999999999999999999999987
Q ss_pred CCCCC---CCCCCCcccCcccccCCCC-CCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006696 492 MNVPA---TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 492 ~~~~~---~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
..... ...+|+.|+|||++.+..+ +.++|||||||++|||++|+.||....... .
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---------------------~ 238 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV---------------------E 238 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT---------------------T
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH---------------------h
Confidence 65433 2357899999999988877 789999999999999999999997422100 0
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
....... .....+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~---~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 AAIHPPY---LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp TCCCCSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred hccCCCc---ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000001 122356788889999999999999999986
No 151
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-38 Score=344.31 Aligned_cols=238 Identities=22% Similarity=0.357 Sum_probs=197.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... +++.||||++.... .....+.+|+.+++.+ +||||+++++++...+..++||||++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 468999999999999976 68899999997542 2345788999999998 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC--
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 100 gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 100 GGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp SEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999999642 34899999999999999999999998 999999999999999999999999999876443
Q ss_pred -CCCCCCCcccCcccccCCCC-CCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 496 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 -~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
.+..||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ......+...... ..
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~---------~p 236 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV------PTLFKKICDGIFY---------TP 236 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS------HHHHHHHHTTCCC---------CC
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH------HHHHHHHhcCCcC---------CC
Confidence 24568999999999988776 6899999999999999999999975432 1222222221110 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
......+.+++.+||+.||++|||++|++++
T Consensus 237 ---~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 237 ---QYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ---TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ---ccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1112356788889999999999999999984
No 152
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.5e-38 Score=324.29 Aligned_cols=243 Identities=21% Similarity=0.339 Sum_probs=198.0
Q ss_pred hhccccccCceEEEEEEec-CCCeEEEEEeecccC-------CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEe
Q 006696 342 SAEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 342 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
..+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++.++ +||||+++++++.+.+..++||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 94 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLIL 94 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEEE
Confidence 3578999999999999976 578899999976532 256789999999999 8999999999999999999999
Q ss_pred eeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCC----CeEEeccCCC
Q 006696 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLT 489 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~----~~ki~DfGla 489 (635)
||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++
T Consensus 95 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 95 ELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp CCCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999999742 34899999999999999999999998 99999999999999888 7999999999
Q ss_pred CCCCCC---CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 490 PLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 490 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
...... ....+|+.|+|||++.+..++.++||||||+++|||++|..||...... .....+...... +
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~~~---~ 237 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANITSVSYD---F 237 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHTTCCC---C
T ss_pred eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhcccc---c
Confidence 765443 2345788999999999999999999999999999999999999754321 112221111110 0
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
+... . ......+.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~~--~---~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 238 DEEF--F---SHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CHHH--H---TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred Chhh--h---cccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1110 0 1122457788889999999999999999874
No 153
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7.2e-39 Score=325.10 Aligned_cols=244 Identities=22% Similarity=0.329 Sum_probs=191.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||++... ++..||+|++..... ..+.+.+|+++++++ +||||+++++++.+.+..++||||+++|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhC-CCchHHhHHHheecCCeEEEEEEeCCCC
Confidence 578999999999999975 578899999876543 457889999999999 9999999999999999999999999999
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE---cCCCCeEEeccCCCCCCCCC-
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~ki~DfGla~~~~~~- 495 (635)
+|.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 106 ~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 106 ELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp BHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred cHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99998854321 1235999999999999999999999998 9999999999999 45688999999999765433
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 496 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 --~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....+++.|+|||++. ..++.++||||||+++|||++|+.||...... ............... . .
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~------~~~~~~~~~~~~~~~-~-----~ 248 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE------EVQQKATYKEPNYAV-E-----C 248 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCCCC--------
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH------HHHhhhccCCccccc-c-----c
Confidence 2345788999999986 46889999999999999999999999754321 111111111110000 0 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
. .....+.+++.+||+.||++|||+.|++++
T Consensus 249 ~---~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 249 R---PLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp C---CCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred C---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 112456788889999999999999999863
No 154
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.1e-39 Score=324.89 Aligned_cols=247 Identities=26% Similarity=0.414 Sum_probs=194.2
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeC-CceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-DEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||++... ++.||+|+++... ..+.+.+|++++.++ +||||+++++++... +..++||||+++|+|
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 578999999999999875 7899999987543 456788999999999 899999999997654 478999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-CCCC
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSR 500 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-~~~~ 500 (635)
.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++....... ...+
T Consensus 103 ~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 176 (278)
T 1byg_A 103 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 176 (278)
T ss_dssp HHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------------C
T ss_pred HHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccccCCCc
Confidence 99996432 123788999999999999999999998 9999999999999999999999999987654332 3346
Q ss_pred CCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHH
Q 006696 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEE 579 (635)
Q Consensus 501 t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 579 (635)
++.|+|||.+.+..++.++||||||+++|||++ |..||......+ .... +...... ......
T Consensus 177 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~-~~~~~~~----------~~~~~~ 239 (278)
T 1byg_A 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------VVPR-VEKGYKM----------DAPDGC 239 (278)
T ss_dssp CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG------HHHH-HTTTCCC----------CCCTTC
T ss_pred cccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHH-HhcCCCC----------CCcccC
Confidence 788999999998899999999999999999998 999997653222 1111 1111110 011122
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 580 MVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 580 ~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
...+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 346778888999999999999999999999998654
No 155
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.1e-39 Score=338.76 Aligned_cols=254 Identities=24% Similarity=0.360 Sum_probs=202.4
Q ss_pred hccccccCceEEEEEEecC------CCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||.||+|.... ...||+|++..... ..+.+.+|+.++.++.+||||+++++++...+..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 5789999999999999653 23699999876532 245688999999999889999999999999999999999
Q ss_pred eccCCChhccccCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEec
Q 006696 415 YFASGSLSTLLHGNRG---------AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~D 485 (635)
|+++|+|.+++..... .....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~D 207 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGD 207 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGGGEEEBCC
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCCCeEEECc
Confidence 9999999999864321 01234899999999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhh
Q 006696 486 FGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVR 558 (635)
Q Consensus 486 fGla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 558 (635)
||++....... ...+++.|+|||++.+..++.++||||||+++|||+| |..||......+ .......
T Consensus 208 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~~~~~ 281 (333)
T 2i1m_A 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS------KFYKLVK 281 (333)
T ss_dssp CGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH------HHHHHHH
T ss_pred cccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH------HHHHHHh
Confidence 99997653322 2234667999999998899999999999999999999 999997643221 1112222
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
...... ........+.+++.+||+.||.+|||+.|++++|+++.+..
T Consensus 282 ~~~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 282 DGYQMA----------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCC----------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 211110 01112346778888999999999999999999999987653
No 156
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.1e-38 Score=318.02 Aligned_cols=241 Identities=21% Similarity=0.321 Sum_probs=195.4
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc-CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCC
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||.||+|.... +..||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||+++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGE 92 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeEEEEEeccCCCc
Confidence 5789999999999999764 5689999987653 3467899999999999 99999999999999999999999999999
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE---cCCCCeEEeccCCCCCCCCC--
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~ki~DfGla~~~~~~-- 495 (635)
|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 93 L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 93 LFERVVHK-----RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp HHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 99988642 34899999999999999999999998 9999999999999 78899999999998765433
Q ss_pred -CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006696 496 -ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 496 -~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
....+|+.|+|||++.+. ++.++||||||+++|||++|+.||...... ............. .... .
T Consensus 165 ~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~--~~~~---~- 231 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS------EVMLKIREGTFTF--PEKD---W- 231 (277)
T ss_dssp BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCC--CHHH---H-
T ss_pred hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCCCCC--Cchh---h-
Confidence 234578899999998764 899999999999999999999999754321 1111111111100 0000 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 575 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
......+.+++.+||+.||++|||+.|++++
T Consensus 232 --~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 232 --LNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp --TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred --hcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0123467788889999999999999999974
No 157
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.5e-38 Score=317.35 Aligned_cols=241 Identities=22% Similarity=0.361 Sum_probs=194.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++..+ +||||+++++++.+.+..++||||++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEEEEEEecCCC
Confidence 568999999999999976 578999999875533 246788999999999 9999999999999999999999999999
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC-----
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV----- 494 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~----- 494 (635)
+|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 999999642 34899999999999999999999998 99999999999999999999999999875432
Q ss_pred -CCCCCCCCcccCcccccCCCC-CCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 495 -PATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 495 -~~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
.....+++.|+|||.+.+..+ +.++||||||+++|||++|+.||........ ....+ ......
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~----~~~~~~---------- 227 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDW----KEKKTY---------- 227 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHH----HTTCTT----------
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHh----hhcccc----------
Confidence 223457889999999987765 7789999999999999999999986543211 11111 111000
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
..........+.+++.+||+.||++|||++|++++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 228 LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 00011223456788889999999999999999874
No 158
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=7.2e-39 Score=330.12 Aligned_cols=256 Identities=20% Similarity=0.359 Sum_probs=197.3
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeeccc-CCHHHHHHHHHHHHhhCCCCceeceeEEEEe----CCceEEEeeec
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~~ 416 (635)
.+.||+|+||.||++.. .+++.||+|++.... ...+.+.+|+++++++ +||||+++++++.. ....++||||+
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 47899999999999997 568899999986542 2356788999999999 99999999999873 34678999999
Q ss_pred cCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC
Q 006696 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 496 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~ 496 (635)
++|+|.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 188 (317)
T 2buj_A 113 KRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188 (317)
T ss_dssp TTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred CCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence 99999999875332 2345999999999999999999999998 9999999999999999999999999987653211
Q ss_pred -------------CCCCCCcccCcccccCCC---CCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc
Q 006696 497 -------------TPSRSAGYRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREE 560 (635)
Q Consensus 497 -------------~~~~t~~y~aPE~~~~~~---~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 560 (635)
...+++.|+|||++.+.. ++.++||||||+++|||++|+.||....... ...... ....
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~----~~~~ 263 (317)
T 2buj_A 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVALA----VQNQ 263 (317)
T ss_dssp ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-SCHHHH----HHCC
T ss_pred ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-chhhHH----hhcc
Confidence 122588899999997654 6899999999999999999999996321111 011110 0000
Q ss_pred cccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCCC
Q 006696 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 618 (635)
Q Consensus 561 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 618 (635)
. ..+........+.+++.+||+.||.+|||+.|++++|+.+....+.+
T Consensus 264 ~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~ 311 (317)
T 2buj_A 264 L----------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311 (317)
T ss_dssp ------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred C----------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence 0 01111122346778888999999999999999999999987655443
No 159
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.5e-39 Score=342.99 Aligned_cols=247 Identities=13% Similarity=0.033 Sum_probs=177.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC----CHHHHHHHHHHHHhhC-CCCceecee-------EEEEeCC--
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVG-QHPNVVPLR-------AYYYSKD-- 407 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~-~h~niv~l~-------~~~~~~~-- 407 (635)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++..+. +||||++++ +++....
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence 468999999999999965 678899999987543 2345677877666664 599987754 4554332
Q ss_pred ---------------ceEEEeeeccCCChhccccCCCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCceec
Q 006696 408 ---------------EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETR------VKILLGTARGVAHIHSMGGPKFTHG 466 (635)
Q Consensus 408 ---------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~ivHr 466 (635)
..++||||++ |+|.+++..... .+.+..+ ..++.||+.||+|||+++ |+||
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---ivHr 218 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHG 218 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EEET
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---CccC
Confidence 3799999999 899999975321 2444555 678899999999999998 9999
Q ss_pred CCCCCCEEEcCCCCeEEeccCCCCCCCCCC-CCCCCCcccCcccccC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCC
Q 006696 467 NIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR 543 (635)
Q Consensus 467 Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~ 543 (635)
||||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999998765544 4456789999999987 6799999999999999999999999987643
Q ss_pred CCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006696 544 DDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 606 (635)
....... ............ ..+........+.+++.+||+.||++|||+.|+++
T Consensus 299 ~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKGSWK--------RPSLRVPGTDSL-AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTTCCC--------BCCTTSCCCCSC-CCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccchh--------hhhhhhcccccc-chhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 3211100 000000000000 01111122346778888999999999999999986
No 160
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.2e-38 Score=322.64 Aligned_cols=251 Identities=20% Similarity=0.307 Sum_probs=192.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC----HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|+.++.++ +||||+++++++..++..++||||++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 117 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLYVDMRLIN 117 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCeEEEEEEecC
Confidence 468999999999999975 5778999998765332 35688899999999 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 118 ~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 118 GVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999999742 24899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ----CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 497 ----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 497 ----~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
...+++.|+|||++.+..++.++||||||+++|||++|+.||..... ............. ... .
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~----~~~-~ 257 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-------SVMGAHINQAIPR----PST-V 257 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-------HHHHHHHHSCCCC----GGG-T
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-------HHHHHHhccCCCC----ccc-c
Confidence 33578889999999999999999999999999999999999975321 1111111111100 000 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHHhhcCCC
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRP-NMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RP-s~~evl~~L~~~~~~~~~ 617 (635)
. ......+.+++.+||+.||++|| +++++++.|+++......
T Consensus 258 ~---~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 258 R---PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp S---TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred C---CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 0 11223567788899999999999 999999999988766544
No 161
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8e-39 Score=343.54 Aligned_cols=193 Identities=23% Similarity=0.319 Sum_probs=168.3
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCCHHHHHHHHHHHHhhC-----CCCceeceeEEEEeCCceEEEeeec
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVG-----QHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+|+||+||+|.... ++.||||+++........+.+|+.++..+. +|+||+++++++...+..++||||+
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 181 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence 4789999999999998654 788999999765444567788888888773 5779999999999999999999999
Q ss_pred cCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCC--eEEeccCCCCCCCC
Q 006696 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD--GCISDFGLTPLMNV 494 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~--~ki~DfGla~~~~~ 494 (635)
. ++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||++.....
T Consensus 182 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 182 S-MNLYELIKKNK---FQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp C-CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 6 59999987543 234899999999999999999999998 999999999999999987 99999999976544
Q ss_pred C-CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCC
Q 006696 495 P-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542 (635)
Q Consensus 495 ~-~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~ 542 (635)
. .+..+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 3 34568899999999999999999999999999999999999998654
No 162
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-38 Score=332.74 Aligned_cols=247 Identities=20% Similarity=0.258 Sum_probs=191.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc------CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV------VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||.||+|... ++..||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCCeEEEEEeC
Confidence 578999999999999975 57789999987542 2246788999999999 899999999999999999999999
Q ss_pred ccCCChhccccCCCCC-----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 006696 416 FASGSLSTLLHGNRGA-----------------------------------GRTPLDWETRVKILLGTARGVAHIHSMGG 460 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ 460 (635)
+++|+|.+++...... ....+++..+..++.||+.||+|||+.+
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~- 188 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG- 188 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-
Confidence 9999999988521110 0122467788899999999999999998
Q ss_pred CCceecCCCCCCEEEcCCC--CeEEeccCCCCCCCC--------CCCCCCCCcccCcccccC--CCCCCccchHhHHHHH
Q 006696 461 PKFTHGNIKASNVLINQDL--DGCISDFGLTPLMNV--------PATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLL 528 (635)
Q Consensus 461 ~~ivHrDlk~~NIll~~~~--~~ki~DfGla~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~~DvwS~Gv~l 528 (635)
|+||||||+||+++.++ .+||+|||++..... .....+|+.|+|||++.+ ..++.++|||||||++
T Consensus 189 --ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il 266 (345)
T 3hko_A 189 --ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266 (345)
T ss_dssp --EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHH
T ss_pred --ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHH
Confidence 99999999999998776 899999999975422 123457889999999975 6789999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 529 LEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 529 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
|||++|+.||...... .............. . +........+.+++.+||+.||++|||+.|++++
T Consensus 267 ~el~~g~~pf~~~~~~------~~~~~~~~~~~~~~--~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 267 HLLLMGAVPFPGVNDA------DTISQVLNKKLCFE--N------PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHSSCSSCCSSHH------HHHHHHHHCCCCTT--S------GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHCCCCCCCCChH------HHHHHHHhcccccC--C------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 9999999999754321 11222221111100 0 0111123457788889999999999999999984
No 163
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3e-38 Score=321.44 Aligned_cols=244 Identities=24% Similarity=0.346 Sum_probs=195.8
Q ss_pred cccccCceEEEEEEec---CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 345 VLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 345 ~iG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.||+|+||.||+|.+. .++.||||+++..... .+.+.+|++++..+ +||||+++++++ ..+..++||||+++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~ 101 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAESWMLVMEMAEL 101 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence 7999999999999643 3577999999765332 46788999999999 899999999999 66788999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCCC-
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT- 497 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~~- 497 (635)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 102 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 102 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 9999999743 24899999999999999999999998 99999999999999999999999999876543321
Q ss_pred ------CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006696 498 ------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 498 ------~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
..+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+......
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~~------- 239 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKGERM------- 239 (291)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------HHHHHHTTCCC-------
T ss_pred ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCCC-------
Confidence 234577999999998889999999999999999999 999997643211 11111111100
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
.........+.+++.+||+.||++||++.|+++.|+++....
T Consensus 240 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 240 ---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 011123346778888999999999999999999999987543
No 164
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.3e-38 Score=341.76 Aligned_cols=251 Identities=22% Similarity=0.302 Sum_probs=186.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCC------ceEEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------EKLLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lv 412 (635)
.+.||+|+||+||+|... +++.||||++...... .+.+.+|+.+++.+ +||||+++++++.... ..|+|
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCccccCCeEEEE
Confidence 468999999999999865 4788999999765332 45678899999999 9999999999996553 56999
Q ss_pred eeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCC
Q 006696 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+++ +|.+.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 146 ~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 146 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred EeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 999976 56666642 2889999999999999999999998 999999999999999999999999999876
Q ss_pred CCC---CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH---------------
Q 006696 493 NVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ--------------- 554 (635)
Q Consensus 493 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~--------------- 554 (635)
... ....+|+.|+|||++.+..|+.++||||+||++|||++|+.||.+.+..+. +.....
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~--~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ--WNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp --CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCSCCHHHHTTSCH
T ss_pred CCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCHHHHHHcch
Confidence 543 234689999999999999999999999999999999999999986542111 000000
Q ss_pred ---HHhhhccc-ccc-chhhhh----c--ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 555 ---SVVREEWT-AEV-FDVELM----R--FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 555 ---~~~~~~~~-~~~-~d~~~~----~--~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
........ ... +..... . ..........+.+++.+||+.||++|||++|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 000 000000 0 00011224568899999999999999999999985
No 165
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.1e-38 Score=321.47 Aligned_cols=241 Identities=20% Similarity=0.323 Sum_probs=194.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|... +++.||+|++..... ....+.+|+..+.++.+||||+++++++.+++..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 578999999999999976 688999999986533 2456778888888887999999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCC-------------------C
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-------------------L 479 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~-------------------~ 479 (635)
|+|.+++..... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.+ .
T Consensus 96 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 96 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC--------------------CC
T ss_pred CcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 999999975321 1234899999999999999999999998 9999999999999844 4
Q ss_pred CeEEeccCCCCCCCCCCCCCCCCcccCcccccCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh
Q 006696 480 DGCISDFGLTPLMNVPATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR 558 (635)
Q Consensus 480 ~~ki~DfGla~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 558 (635)
.+||+|||.+..........+++.|+|||++.+. .++.++|||||||++|||++|.+|+.... . .....
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~-~~~~~- 241 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--------Q-WHEIR- 241 (289)
T ss_dssp CEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--------H-HHHHH-
T ss_pred EEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--------H-HHHHH-
Confidence 7999999999888777777799999999999876 56689999999999999999998764321 0 11111
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
....... .......+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 242 QGRLPRI----------PQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp TTCCCCC----------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred cCCCCCC----------CcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111000 01123457788889999999999999999874
No 166
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-38 Score=321.16 Aligned_cols=237 Identities=23% Similarity=0.337 Sum_probs=174.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC----CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.+++++ +||||+++++++.+.+..++||||+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~- 95 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSCEEEEEECC-
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCeEEEEehhc-
Confidence 367999999999999854 578999999875432 245788999999999 8999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 96 ~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 96 GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 66888887642 34899999999999999999999998 9999999999999999999999999997654432
Q ss_pred --CCCCCCcccCcccccCCCC-CCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 497 --TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 497 --~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
...+|+.|+|||++.+..+ +.++||||||+++|||++|+.||..... .............
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~----------- 230 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------PVLFKNISNGVYT----------- 230 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC-----------
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCC-----------
Confidence 3457889999999988765 7899999999999999999999975431 1111211111110
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
........+.+++.+||+.||++|||++|++++
T Consensus 231 -~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 231 -LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 011123456788889999999999999999874
No 167
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.2e-38 Score=336.89 Aligned_cols=258 Identities=17% Similarity=0.255 Sum_probs=198.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhC-------CCCceeceeEEEE----eCCceE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG-------QHPNVVPLRAYYY----SKDEKL 410 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-------~h~niv~l~~~~~----~~~~~~ 410 (635)
.+.||+|+||+||+|+.. +++.||||+++......+.+.+|++++.++. +|+||+++++++. .....+
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 121 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence 568999999999999864 5778999999765444567889999999884 2888999999987 455789
Q ss_pred EEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEEcCCC----------
Q 006696 411 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDL---------- 479 (635)
Q Consensus 411 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~~~~---------- 479 (635)
+||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ + |+||||||+|||++.++
T Consensus 122 lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 122 MVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred EEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhhhhhh
Confidence 999999 556666665332 23499999999999999999999998 7 99999999999999775
Q ss_pred ---------------------------------------CeEEeccCCCCCCCCC-CCCCCCCcccCcccccCCCCCCcc
Q 006696 480 ---------------------------------------DGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKS 519 (635)
Q Consensus 480 ---------------------------------------~~ki~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~ 519 (635)
.+||+|||++...... ....+|+.|+|||++.+..++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 274 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 274 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence 8999999999765443 334689999999999999999999
Q ss_pred chHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh---h---------ccccccch------------------hh
Q 006696 520 DVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR---E---------EWTAEVFD------------------VE 569 (635)
Q Consensus 520 DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~d------------------~~ 569 (635)
|||||||++|||++|+.||......+...-......+.. . .+....+. ..
T Consensus 275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
T 1wak_A 275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL 354 (397)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence 999999999999999999987665543322111111110 0 00000000 00
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 570 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.............+.+++.+||+.||++|||++|++++
T Consensus 355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 01112235666788999999999999999999999874
No 168
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.1e-38 Score=317.83 Aligned_cols=242 Identities=21% Similarity=0.334 Sum_probs=195.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~ 89 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 89 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEEEEEEecCCC
Confidence 467999999999999975 4788999999766543 34577899999999 899999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCC---eEEeccCCCCCCCCC
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~---~ki~DfGla~~~~~~ 495 (635)
|+|.+.+... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 90 ~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 90 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9998888643 34899999999999999999999998 999999999999987665 999999999765543
Q ss_pred C---CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 496 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ~---~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
. ...+++.|+|||++.+..++.++||||||+++|||++|+.||...... .............. .+ .
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~--~~---~ 230 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------RLYAQIKAGAYDYP--SP---E 230 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCCC--TT---T
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh------HHHHHHHhccccCC--ch---h
Confidence 3 345788999999999999999999999999999999999999754321 11222111111100 00 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
. ......+.+++.+||+.||++|||+.|++++
T Consensus 231 ~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 231 W---DTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp T---TTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred h---cccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 1223456788889999999999999999985
No 169
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-38 Score=330.14 Aligned_cols=256 Identities=14% Similarity=0.164 Sum_probs=199.3
Q ss_pred hccccccCceEEEEEEecC---------CCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceec---------------
Q 006696 343 AEVLGKGSYGTAYKAVLEE---------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVP--------------- 398 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~--------------- 398 (635)
.+.||+|+||.||+|.... ++.||+|++... +.+.+|++++.++ +||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRA-AKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHH-CCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHh-cccchhhhhhhhccCCccCccc
Confidence 4679999999999999764 788999998753 5688999999999 8999887
Q ss_pred eeEEEEe-CCceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC
Q 006696 399 LRAYYYS-KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ 477 (635)
Q Consensus 399 l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~ 477 (635)
+++++.. +...++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDP 194 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEET
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcC
Confidence 6778776 67889999999 999999997542 235999999999999999999999998 999999999999999
Q ss_pred CC--CeEEeccCCCCCCCCC-----------CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCC
Q 006696 478 DL--DGCISDFGLTPLMNVP-----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544 (635)
Q Consensus 478 ~~--~~ki~DfGla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~ 544 (635)
++ .+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 98 9999999999765322 2235788999999999999999999999999999999999999864322
Q ss_pred CCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 545 DMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
. ..+.......... .....+... ... .....+.+++.+||+.||++|||++|+++.|+++.+....
T Consensus 275 ~-~~~~~~~~~~~~~--~~~~~~~~~-~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 275 T-EDIMKQKQKFVDK--PGPFVGPCG-HWI---RPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp H-HHHHHHHHHHHHS--CCCEECTTS-CEE---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred H-HHHHHHHHhccCC--hhhhhhhcc-ccC---CCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 1 1111111111110 011111000 001 1124577888899999999999999999999999876543
No 170
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1e-37 Score=315.94 Aligned_cols=251 Identities=20% Similarity=0.370 Sum_probs=200.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-------CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||.||+|... +++.||+|+++.... ..+.+.+|+.++.++ +||||+++++++...+..++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCCeEEEEEe
Confidence 578999999999999976 588999999876532 356789999999999 89999999999999999999999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCC----CeEEeccCCCC
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLTP 490 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~----~~ki~DfGla~ 490 (635)
|+++++|.+++... ..+++..+..++.||+.||+|||+.+ ++||||||+||+++.++ .+||+|||++.
T Consensus 89 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 89 LVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred ecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999642 34899999999999999999999998 99999999999998877 89999999997
Q ss_pred CCCCCC---CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006696 491 LMNVPA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 491 ~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
...... ...+++.|+|||++.+..++.++||||||+++|||++|..||...... ............ ..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~---~~ 231 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ------ETLTNISAVNYD---FD 231 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTTCCC---CC
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH------HHHHHhHhcccC---Cc
Confidence 654332 335788999999999999999999999999999999999999754321 111111111100 00
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHHhhcCC
Q 006696 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVRQSDS 616 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~--~L~~~~~~~~ 616 (635)
... . ......+.+++.+||+.||++|||+.|+++ .++.+.....
T Consensus 232 ~~~--~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~ 277 (283)
T 3bhy_A 232 EEY--F---SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNV 277 (283)
T ss_dssp HHH--H---TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCCC
T ss_pred chh--c---ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHhh
Confidence 000 0 112345778888999999999999999998 5677765543
No 171
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.3e-38 Score=334.97 Aligned_cols=234 Identities=21% Similarity=0.265 Sum_probs=183.1
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCC----HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|+... +..||+|++++.... ...+.+|..++.+..+||||+++++++.+.+..|+||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 4789999999999999764 678999999765432 23445566554333389999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC---
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~--- 494 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 123 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~ 194 (373)
T 2r5t_A 123 GGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194 (373)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccCCC
Confidence 99999999742 24889999999999999999999998 99999999999999999999999999975322
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 495 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 495 -~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
.....||+.|+|||++.+..++.++|||||||++|||++|..||...+.. .....+...... ..
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~~~---------~~ 259 (373)
T 2r5t_A 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA------EMYDNILNKPLQ---------LK 259 (373)
T ss_dssp CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH------HHHHHHHHSCCC---------CC
T ss_pred ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHhcccC---------CC
Confidence 23446899999999999999999999999999999999999999754321 222222222110 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMD 602 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ 602 (635)
.. ....+.+++.+||+.||++||++.
T Consensus 260 ~~---~~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 260 PN---ITNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp SS---SCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred CC---CCHHHHHHHHHHcccCHHhCCCCC
Confidence 11 223567788899999999999985
No 172
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6.3e-40 Score=346.62 Aligned_cols=243 Identities=12% Similarity=0.158 Sum_probs=185.5
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccC----CHHHHHHHHHHHHhhC--CCCceecee-------EEEEeCCc
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVG--QHPNVVPLR-------AYYYSKDE 408 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~--~h~niv~l~-------~~~~~~~~ 408 (635)
.+.||+|+||+||+|.. .+++.||||++..... ..+.+.+|++++..+. +||||++++ +++...+.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 46899999999999996 4588999999975422 2467889996555443 799999998 66665532
Q ss_pred -----------------eEEEeeeccCCChhccccCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCC
Q 006696 409 -----------------KLLVYDYFASGSLSTLLHGNRGA--GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIK 469 (635)
Q Consensus 409 -----------------~~lv~e~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk 469 (635)
.++||||+ +|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+|||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDik 233 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLR 233 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence 78999999 67999999753211 1123456888899999999999999998 9999999
Q ss_pred CCCEEEcCCCCeEEeccCCCCCCCCCC-CCCCCCcccCcccccCC-----------CCCCccchHhHHHHHHHHHhCCCC
Q 006696 470 ASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAGYRAPEVIETR-----------KHSHKSDVYSFGVLLLEMLTGKAP 537 (635)
Q Consensus 470 ~~NIll~~~~~~ki~DfGla~~~~~~~-~~~~t~~y~aPE~~~~~-----------~~~~~~DvwS~Gv~l~elltg~~p 537 (635)
|+|||++.++.+||+|||+++...... ...| +.|+|||++.+. .++.++|||||||++|||++|+.|
T Consensus 234 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~P 312 (377)
T 3byv_A 234 PVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312 (377)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998654432 3346 899999999887 899999999999999999999999
Q ss_pred CCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHHh
Q 006696 538 LQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVR 612 (635)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~--~L~~~~ 612 (635)
|......+.... + ...... ....+.+++.+||+.||++|||+.|+++ .++.+.
T Consensus 313 f~~~~~~~~~~~---------------~----~~~~~~---~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 313 ITKDAALGGSEW---------------I----FRSCKN---IPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR 367 (377)
T ss_dssp C------CCSGG---------------G----GSSCCC---CCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred Ccccccccchhh---------------h----hhhccC---CCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHH
Confidence 976543332110 0 000111 1245677888999999999999999997 455444
No 173
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=333.48 Aligned_cols=244 Identities=21% Similarity=0.341 Sum_probs=195.4
Q ss_pred hccccccCceEEEEEEe----cCCCeEEEEEeeccc-----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEe
Q 006696 343 AEVLGKGSYGTAYKAVL----EESTTVVVKRLKEVV-----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
.+.||+|+||.||+++. .+++.||||+++... .....+.+|++++.++.+||||+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 57899999999999997 368899999987542 234567789999999977999999999999999999999
Q ss_pred eeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCC
Q 006696 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 139 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 139 DYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp CCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 999999999999743 24899999999999999999999998 9999999999999999999999999987543
Q ss_pred CC-----CCCCCCCcccCcccccC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 494 VP-----ATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 494 ~~-----~~~~~t~~y~aPE~~~~--~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..............
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~----- 283 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSEP----- 283 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHHHCCC-----
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHHhccCC-----
Confidence 22 22358999999999986 347899999999999999999999997554322 22222222221110
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHH
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRMI 608 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L 608 (635)
.........+.+++.+||+.||++|| +++|++++.
T Consensus 284 -------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 284 -------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -------CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 01112234567888899999999999 999999864
No 174
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=7.6e-39 Score=330.73 Aligned_cols=251 Identities=23% Similarity=0.376 Sum_probs=200.8
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||.||+|... .++.||+|++..... ....+.+|+.+++++ +||||+++++++.+.+..++|||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEccCCccEEEEE
Confidence 578999999999999864 367799999975433 234688899999999 99999999999999999999999
Q ss_pred eccCCChhccccCCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCC
Q 006696 415 YFASGSLSTLLHGNRG-----AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 489 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla 489 (635)
|+++|+|.+++..... .....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl~Dfg~~ 185 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 185 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEECcCccc
Confidence 9999999999864321 11234789999999999999999999998 999999999999999999999999998
Q ss_pred CCCCCCC------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006696 490 PLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 490 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
....... ...+++.|+|||++.+..++.++||||||+++|||++ |..||...... ............
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~~~~~~~~~~ 259 (322)
T 1p4o_A 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLL 259 (322)
T ss_dssp CGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH------HHHHHHHTTCCC
T ss_pred cccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH------HHHHHHHcCCcC
Confidence 7653221 2234778999999999899999999999999999999 89999754321 112221111110
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 563 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
.........+.+++.+||+.||++|||+.|++++|+++...
T Consensus 260 -----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 260 -----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred -----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 00112234577888899999999999999999999987653
No 175
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=336.36 Aligned_cols=259 Identities=19% Similarity=0.326 Sum_probs=180.5
Q ss_pred hccccccCceEEEEEEec---CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEe--CCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~e~~~ 417 (635)
+++||+|+||+||+|... ++..||+|++..... ...+.+|+.+++++ +||||+++++++.. ....++||||+.
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHC-CCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhc-CCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 568999999999999965 467899999975433 35688999999999 89999999999965 567899999997
Q ss_pred CCChhccccCCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE----cCCCCeEEeccCCC
Q 006696 418 SGSLSTLLHGNRG----AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI----NQDLDGCISDFGLT 489 (635)
Q Consensus 418 ~g~L~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll----~~~~~~ki~DfGla 489 (635)
+ +|.+++..... .....+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 104 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp E-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred C-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 5 88877753221 11234899999999999999999999998 9999999999999 67899999999999
Q ss_pred CCCCCC-------CCCCCCCcccCcccccCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCC---ChhHHHHHHhh
Q 006696 490 PLMNVP-------ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV---DLPRWVQSVVR 558 (635)
Q Consensus 490 ~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~---~~~~~~~~~~~ 558 (635)
+..... ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.....+... .....+..+..
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~ 259 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH
Confidence 876432 234578999999999874 5899999999999999999999999865432110 00111111110
Q ss_pred -------hccccc--c---------chhhhhcccChHH--------HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 559 -------EEWTAE--V---------FDVELMRFQNIEE--------EMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 559 -------~~~~~~--~---------~d~~~~~~~~~~~--------~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
..|... . +............ ....+.+|+.+||+.||++|||++|++++
T Consensus 260 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000 0 0000000000000 02356789999999999999999999985
No 176
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.4e-38 Score=343.99 Aligned_cols=238 Identities=20% Similarity=0.273 Sum_probs=188.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC----CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... +++.||+|+++.... ....+.+|+.+++.+ +||||+++++++...+..++||||++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 578999999999999965 578999999975421 234567788888888 89999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC-
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS-MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 232 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 232 GGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp SCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 99999998643 348999999999999999999998 77 999999999999999999999999999764322
Q ss_pred ---CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 496 ---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+......
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~~---------- 367 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILMEEIR---------- 367 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC----------
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH------HHHHHHHHhCCCC----------
Confidence 234689999999999999999999999999999999999999975432 1122222211110
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~ 607 (635)
........+.+++.+||+.||++|| +++|++++
T Consensus 368 --~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 368 --FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp --CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 0011224567888899999999999 99999873
No 177
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=9.5e-38 Score=334.27 Aligned_cols=242 Identities=21% Similarity=0.335 Sum_probs=185.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---------CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
.+.||+|+||+||+|... +++.||+|++..... ....+.+|+++++++ +||||+++++++. .+..++|
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~-~~~~~lv 217 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFD-AEDYYIV 217 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEEE-SSEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCceEEE
Confidence 578999999999999965 468899999975421 123578999999999 9999999999975 4568999
Q ss_pred eeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCC---CeEEeccCCC
Q 006696 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLT 489 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~---~~ki~DfGla 489 (635)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 218 ~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 218 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred EEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeecccc
Confidence 9999999999998643 34899999999999999999999998 99999999999997544 5999999999
Q ss_pred CCCCCCC---CCCCCCcccCcccccC---CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccc
Q 006696 490 PLMNVPA---TPSRSAGYRAPEVIET---RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563 (635)
Q Consensus 490 ~~~~~~~---~~~~t~~y~aPE~~~~---~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (635)
+...... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+.... ......
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~~i----~~~~~~ 363 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQI----TSGKYN 363 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHHHH----HTTCCC
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHHHH----hcCCCC
Confidence 8765432 3457999999999863 567889999999999999999999997543222 111111 111000
Q ss_pred ccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 564 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
..... . ......+.+++.+||+.||++|||++|++++
T Consensus 364 -~~~~~---~---~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 364 -FIPEV---W---AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp -CCHHH---H---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -CCchh---h---cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00000 0 1123457788889999999999999999874
No 178
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=5.8e-38 Score=325.23 Aligned_cols=251 Identities=20% Similarity=0.290 Sum_probs=192.2
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEe--CCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|.. .+++.||+|+++. ...+.+.+|++++.++.+||||+++++++.. ....++||||++++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKP--VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECS--CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEecc--cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 47899999999999986 4678999999874 3467899999999999669999999999988 56789999999999
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCC-CeEEeccCCCCCCCCCC--
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL-DGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~-~~ki~DfGla~~~~~~~-- 496 (635)
+|.+++.. +++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++......
T Consensus 119 ~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~ 187 (330)
T 3nsz_A 119 DFKQLYQT--------LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 187 (330)
T ss_dssp CHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC
T ss_pred hHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc
Confidence 99998852 889999999999999999999998 99999999999999777 89999999997654332
Q ss_pred -CCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc------cccchh
Q 006696 497 -TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT------AEVFDV 568 (635)
Q Consensus 497 -~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~d~ 568 (635)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+............. ....++
T Consensus 188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (330)
T 3nsz_A 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVRIAKVLGTEDLYDYIDKYNIELDP 266 (330)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH-HHHHHHHHHHCHHHHHHHHHHTTCCCCT
T ss_pred ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH-HHHHHHHHhcCCchhhhHHHHhcccccc
Confidence 3457888999999977 678999999999999999999999996432110 0111111000000000 000000
Q ss_pred h---------------hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 569 E---------------LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 569 ~---------------~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
. .............+.+++.+||+.||++|||++|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 00001111134567888899999999999999999874
No 179
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=7.1e-38 Score=324.89 Aligned_cols=254 Identities=24% Similarity=0.346 Sum_probs=192.1
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|.... ++.||+|++...... .+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 108 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWYLVFEFVDH 108 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecCCEEEEEEecCCc
Confidence 4689999999999999764 788999998765443 34577899999999 899999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC---
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 180 (331)
T 4aaa_A 109 TILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180 (331)
T ss_dssp EHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred chHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence 9998886532 34899999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCcccccCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH----------HHhh-hccc
Q 006696 496 -ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ----------SVVR-EEWT 562 (635)
Q Consensus 496 -~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~----------~~~~-~~~~ 562 (635)
....+++.|+|||++.+. .++.++|||||||++|||++|+.||......+. +..... .... ....
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ--LYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCCCChhhhhHhhhcccc
Confidence 234578899999999875 689999999999999999999999986542211 000000 0000 0000
Q ss_pred cccchhhhhcccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 563 AEVFDVELMRFQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 563 ~~~~d~~~~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.....+....... .......+.+++.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000000 01223567888899999999999999999974
No 180
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=335.02 Aligned_cols=253 Identities=21% Similarity=0.347 Sum_probs=188.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCC------ceEEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------EKLLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lv 412 (635)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|+++++.+ +||||+++++++.... ..++|
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv 108 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLV 108 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCccccCceEEEE
Confidence 467999999999999974 5889999999654333 35678899999999 8999999999997653 45999
Q ss_pred eeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCC
Q 006696 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+ +++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 109 ~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 109 MPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp EECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 9999 7899999864 23899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC-CCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc------cccc
Q 006696 493 NVPA-TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREE------WTAE 564 (635)
Q Consensus 493 ~~~~-~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 564 (635)
.... ...+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+ ....+.... ....
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 179 DSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD------QLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHHHCCCCHHHHHT
T ss_pred ccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHhcCCCCHHHHHH
Confidence 5433 3467899999999877 679999999999999999999999998653211 111111100 0000
Q ss_pred cch-------hhhh-----cc-cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHHh
Q 006696 565 VFD-------VELM-----RF-QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVR 612 (635)
Q Consensus 565 ~~d-------~~~~-----~~-~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~--L~~~~ 612 (635)
+.. ..+. .. .........+.+++.+||+.||++|||++|++++ ++.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 000 0000 00 0011223457788889999999999999999984 44443
No 181
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=327.82 Aligned_cols=254 Identities=24% Similarity=0.408 Sum_probs=198.7
Q ss_pred hccccccCceEEEEEEe-----cCCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCC--ceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~e 414 (635)
.+.||+|+||.||++++ .+++.||+|++..... ..+.+.+|++++.++ +||||+++++++...+ ..++|||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecCCCceEEEEE
Confidence 57899999999999984 3578899999876433 245788999999999 8999999999987654 6799999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 125 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp CCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred CCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999997542 34899999999999999999999998 99999999999999999999999999976643
Q ss_pred CC-------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCC--------CCCCC-hhHHHHHHhh
Q 006696 495 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR--------DDMVD-LPRWVQSVVR 558 (635)
Q Consensus 495 ~~-------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~--------~~~~~-~~~~~~~~~~ 558 (635)
.. ...++..|+|||.+.+..++.++||||||+++|||+||..||..... ..... ........+.
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 32 22356679999999988899999999999999999999999863210 00000 0000111111
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
... ..+........+.+++.+||+.||++|||+.|+++.|+++++.
T Consensus 278 ~~~----------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 278 NNG----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCC----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 100 0111122345678888999999999999999999999998764
No 182
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.4e-38 Score=318.84 Aligned_cols=242 Identities=24% Similarity=0.384 Sum_probs=191.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEe----CCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e 414 (635)
.+.||+|+||.||+|... ++..||+|++...... .+.+.+|+.+++++ +||||+++++++.. ....++|||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCCceEEEEEE
Confidence 457999999999999975 4678999998765443 35688899999999 99999999999876 345789999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEc-CCCCeEEeccCCCCCCC
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLTPLMN 493 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~-~~~~~ki~DfGla~~~~ 493 (635)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||||||+||+++ +++.+||+|||++....
T Consensus 110 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 110 LMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred ecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999742 34899999999999999999999975 4599999999999998 78999999999997654
Q ss_pred CCC--CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006696 494 VPA--TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 494 ~~~--~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
... ...+++.|+|||++.+ .++.++||||||+++|||++|+.||..... ......... .......++
T Consensus 184 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~-~~~~~~~~~---- 252 (290)
T 1t4h_A 184 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQIYRRVT-SGVKPASFD---- 252 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHHHHHHHT-TTCCCGGGG----
T ss_pred ccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCc-----HHHHHHHHh-ccCCccccC----
Confidence 332 3457899999998874 589999999999999999999999975321 111121111 111111111
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
......+.+++.+||+.||++|||++|++++
T Consensus 253 -----~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 253 -----KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -----GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -----CCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1112357788899999999999999999874
No 183
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.4e-38 Score=330.02 Aligned_cols=253 Identities=22% Similarity=0.290 Sum_probs=191.1
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccC---CHHHHHHHHHHHHhhCCCCceeceeEEEEeC--------CceE
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--------DEKL 410 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--------~~~~ 410 (635)
.+.||+|+||.||+|.. .+++.||+|++..... ....+.+|++++.++ +||||+++++++... +..+
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCcccHhheeeccccccccCCceEE
Confidence 46899999999999997 4688999999865432 245678999999999 899999999999874 4679
Q ss_pred EEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCC
Q 006696 411 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 411 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~ 490 (635)
+||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 101 lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp EEEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 99999986 7777775432 34999999999999999999999998 9999999999999999999999999987
Q ss_pred CCCCC--------CCCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh---
Q 006696 491 LMNVP--------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR--- 558 (635)
Q Consensus 491 ~~~~~--------~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 558 (635)
..... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.. ........
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~i~~~~~~~~ 249 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL---ALISQLCGSIT 249 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCCC
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCCC
Confidence 65321 22346888999999876 45899999999999999999999999865422211 11111110
Q ss_pred hccccccchhhh--------hcccChHHH------HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 559 EEWTAEVFDVEL--------MRFQNIEEE------MVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 559 ~~~~~~~~d~~~--------~~~~~~~~~------~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
............ ......... ...+.+++.+||+.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000000000 000111111 2347789999999999999999999985
No 184
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.7e-37 Score=326.22 Aligned_cols=243 Identities=19% Similarity=0.365 Sum_probs=194.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---------HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
.+.||+|+||.||+|... +|+.||||++...... .+.+.+|+.++.++.+||||+++++++......++|
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 178 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEE
Confidence 378999999999999985 6889999998754321 345778999999987899999999999999999999
Q ss_pred eeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCC
Q 006696 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 179 ~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 179 FDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp ECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 9999999999998642 34899999999999999999999998 999999999999999999999999998765
Q ss_pred CCC---CCCCCCCcccCcccccC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccc
Q 006696 493 NVP---ATPSRSAGYRAPEVIET------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563 (635)
Q Consensus 493 ~~~---~~~~~t~~y~aPE~~~~------~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (635)
... ....+|+.|+|||++.+ ..++.++|||||||++|||++|..||..... ......+......
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~~~~~~i~~~~~~- 323 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ------ILMLRMIMEGQYQ- 323 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC-
T ss_pred CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCC-
Confidence 433 23468899999999863 3588999999999999999999999975421 1111111111110
Q ss_pred ccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 564 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
...+. .. .....+.+++.+||+.||++|||+.|++++
T Consensus 324 -~~~~~---~~---~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 324 -FSSPE---WD---DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp -CCHHH---HS---SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -CCCcc---cc---cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00000 00 122457788889999999999999999874
No 185
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.8e-38 Score=328.37 Aligned_cols=254 Identities=19% Similarity=0.299 Sum_probs=196.7
Q ss_pred hccccccCceEEEEEEe--cCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCC------ceeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVL--EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP------NVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~------niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||+||+|.. .+++.||+|+++......+.+.+|++++..+ +|+ +++++++++...+..++|||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL-NTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHH-HHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHh-hhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 46799999999999986 3578899999976544456788899998887 444 59999999999999999999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC-----------------
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ----------------- 477 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~----------------- 477 (635)
|+ +++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 98 ~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 98 LL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred CC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99 889999987543 235899999999999999999999998 999999999999987
Q ss_pred --CCCeEEeccCCCCCCCCC-CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH
Q 006696 478 --DLDGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ 554 (635)
Q Consensus 478 --~~~~ki~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 554 (635)
++.+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||++|..||...+..+.. ....
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~ 247 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL---AMME 247 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH---HHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH---HHHH
Confidence 678999999999765443 3446889999999999999999999999999999999999999865432211 1111
Q ss_pred HHhhh---cc-----ccccc---------------------hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 006696 555 SVVRE---EW-----TAEVF---------------------DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVV 605 (635)
Q Consensus 555 ~~~~~---~~-----~~~~~---------------------d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl 605 (635)
..... .+ ....+ ................+.+++.+||+.||++|||+.|++
T Consensus 248 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 327 (339)
T 1z57_A 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL 327 (339)
T ss_dssp HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence 11100 00 00000 000000111234456788999999999999999999998
Q ss_pred HH
Q 006696 606 RM 607 (635)
Q Consensus 606 ~~ 607 (635)
++
T Consensus 328 ~h 329 (339)
T 1z57_A 328 KH 329 (339)
T ss_dssp TS
T ss_pred cC
Confidence 74
No 186
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.9e-38 Score=329.40 Aligned_cols=256 Identities=18% Similarity=0.295 Sum_probs=194.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|... ++..||+|++..... ..+.+.+|+.++.++ +||||+++++++..++..++||||+++|
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 116 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGG 116 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEEEEEECCCCC
Confidence 467999999999999976 578899999876532 245688999999999 9999999999999999999999999999
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC--CC
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--PA 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~--~~ 496 (635)
+|.+++... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++..... ..
T Consensus 117 ~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (360)
T 3eqc_A 117 SLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188 (360)
T ss_dssp BHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--
T ss_pred CHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccccccccc
Confidence 999999743 2489999999999999999999996 7 99999999999999999999999999864422 23
Q ss_pred CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhH-----------H--------HHHHh
Q 006696 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPR-----------W--------VQSVV 557 (635)
Q Consensus 497 ~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~-----------~--------~~~~~ 557 (635)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||......+...... + .....
T Consensus 189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (360)
T 3eqc_A 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG 268 (360)
T ss_dssp --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------------
T ss_pred CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccc
Confidence 4468899999999999999999999999999999999999997643221100000 0 00000
Q ss_pred hhcc----ccccchhhhhc---ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 558 REEW----TAEVFDVELMR---FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 558 ~~~~----~~~~~d~~~~~---~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.... ..+..+..... ..........+.+++.+||+.||++|||++|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000 00000000000 00001123457888899999999999999999984
No 187
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.2e-37 Score=328.41 Aligned_cols=258 Identities=19% Similarity=0.271 Sum_probs=194.9
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCCHHHHHHHHHHHHhhC----------CCCceeceeEEEEeCC----
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG----------QHPNVVPLRAYYYSKD---- 407 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~----------~h~niv~l~~~~~~~~---- 407 (635)
.+.||+|+||+||+|.. .+++.||||++.........+.+|++++.++. .|+||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 103 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 103 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence 46899999999999996 45788999999765445567888999988873 2899999999998654
Q ss_pred ceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEEc------CCCC
Q 006696 408 EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLIN------QDLD 480 (635)
Q Consensus 408 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~------~~~~ 480 (635)
..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ + |+||||||+|||++ ..+.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEEE
T ss_pred eEEEEEecC-CCCHHHHHHHhh---ccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcCcce
Confidence 678999999 889999997543 23489999999999999999999998 8 99999999999995 3447
Q ss_pred eEEeccCCCCCCCCC-CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh
Q 006696 481 GCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE 559 (635)
Q Consensus 481 ~ki~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 559 (635)
+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.................+...
T Consensus 177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (373)
T 1q8y_A 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256 (373)
T ss_dssp EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence 999999999766543 3446889999999999999999999999999999999999999865543322211111111100
Q ss_pred --ccc--------------------ccc--------chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 560 --EWT--------------------AEV--------FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 560 --~~~--------------------~~~--------~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
... ..+ .+...............+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 000 000 000001122335667788999999999999999999999984
No 188
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=9.5e-39 Score=324.90 Aligned_cols=250 Identities=25% Similarity=0.364 Sum_probs=189.0
Q ss_pred hccccccCceEEEEEEecC--CC--eEEEEEeecccC----CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLEE--ST--TVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~--~~--~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||+||+|.+.. ++ .||+|+++.... ..+.+.+|++++.++ +||||+++++++.... .++|||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-ceeeEe
Confidence 4689999999999998642 23 589999875432 245788999999999 8999999999987654 889999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 101 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 101 LAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp CCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred cccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999997532 34899999999999999999999998 99999999999999999999999999876543
Q ss_pred CC-------CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 495 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 495 ~~-------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
.. ...++..|+|||++.+..++.++||||||+++|||++ |..||...... ............
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~---- 243 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------QILHKIDKEGER---- 243 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTSCCC----
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH------HHHHHHHccCCC----
Confidence 22 2235668999999998889999999999999999999 99999754321 122222211111
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
..........+.+++.+||+.||++|||+.+++++|+++......
T Consensus 244 ------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 288 (291)
T 1u46_A 244 ------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMR 288 (291)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred ------CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccchh
Confidence 011112335678888999999999999999999999998765543
No 189
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=6e-38 Score=324.55 Aligned_cols=243 Identities=23% Similarity=0.385 Sum_probs=191.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEe------CCceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS------KDEKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~------~~~~~lv~e~ 415 (635)
.+.||+|+||.||+|... +++.||+|++.........+.+|+.++.++.+||||+++++++.. .+..++||||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 108 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEEC
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEc
Confidence 468999999999999974 688999999987666678899999999999889999999999987 4578999999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 109 CGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp CTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred CCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 99999999997543 235899999999999999999999998 999999999999999999999999998765432
Q ss_pred ----CCCCCCCcccCccccc-----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 496 ----ATPSRSAGYRAPEVIE-----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 ----~~~~~t~~y~aPE~~~-----~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....+++.|+|||++. +..++.++|||||||++|||++|..||...... .......... .....
T Consensus 183 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~~ 255 (326)
T 2x7f_A 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------RALFLIPRNP-APRLK 255 (326)
T ss_dssp --------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHSC-CCCCS
T ss_pred ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------HHHHHhhcCc-cccCC
Confidence 2345788999999997 567899999999999999999999999754311 1111111111 00000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
. ......+.+++.+||+.||++|||+.|++++
T Consensus 256 ------~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 256 ------S---KKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp ------C---SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ------c---cccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 1112457788889999999999999999884
No 190
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.5e-37 Score=315.05 Aligned_cols=238 Identities=22% Similarity=0.326 Sum_probs=195.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... ++..||+|++.... .....+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 97 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAP 97 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEEEEEEeCC
Confidence 568999999999999976 46689999986542 2356788999999999 89999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC--
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 98 RGELYKELQKH-----GRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 99999998743 24899999999999999999999998 999999999999999999999999998655432
Q ss_pred CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 496 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
....+++.|+|||++.+..++.++||||||+++|||++|..||...... .....+..... ..
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~------------~~ 231 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT------ETHRRIVNVDL------------KF 231 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTTCC------------CC
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh------HHHHHHhcccc------------CC
Confidence 2445788999999999999999999999999999999999999754321 11111111110 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.......+.+++.+|++.||++|||++|++++
T Consensus 232 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 232 PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 01122456788889999999999999999984
No 191
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.7e-37 Score=318.02 Aligned_cols=242 Identities=20% Similarity=0.332 Sum_probs=194.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||.||++... +++.||+|++..... ....+.+|+.++.++ +||||+++++++...+..++||||+++|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHYYLVMQLVSGGE 92 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEEEEEEEcCCCcc
Confidence 578999999999999975 588999999976533 345688999999999 99999999999999999999999999999
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE---cCCCCeEEeccCCCCCCCCCC-
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~ki~DfGla~~~~~~~- 496 (635)
|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++.......
T Consensus 93 L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 164 (304)
T 2jam_A 93 LFDRILER-----GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164 (304)
T ss_dssp HHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence 99998642 24899999999999999999999998 9999999999999 788999999999987654332
Q ss_pred -CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 497 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 -~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...+++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+....... .. +.
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~~~~---~~-----~~ 230 (304)
T 2jam_A 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES------KLFEKIKEGYYEF---ES-----PF 230 (304)
T ss_dssp HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHCCCCC---CT-----TT
T ss_pred ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCCCCC---Cc-----cc
Confidence 123788999999999999999999999999999999999999754321 1122221111100 00 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.......+.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 231 WDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11223467788889999999999999999984
No 192
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.2e-37 Score=340.30 Aligned_cols=241 Identities=21% Similarity=0.334 Sum_probs=195.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecc---cCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEV---VVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|... +++.||||++... ......+.+|+++++++ +||||+++++++......++||||+.+
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 105 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCEEEEEEEcCCC
Confidence 578999999999999975 5789999999654 23467789999999999 999999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEc---CCCCeEEeccCCCCCCCCC
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN---QDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~---~~~~~ki~DfGla~~~~~~ 495 (635)
|+|.+.+... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 106 ~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 106 GELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 9999988643 34899999999999999999999998 99999999999995 4567999999999866443
Q ss_pred C---CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 496 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ~---~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
. ...+|+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.... .....+....+.... ..
T Consensus 178 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~~~-----~~ 245 (486)
T 3mwu_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY------DILKRVETGKYAFDL-----PQ 245 (486)
T ss_dssp ----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCSCS-----GG
T ss_pred CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCCCC-----cc
Confidence 2 3458899999999976 5999999999999999999999999764321 122222222111100 01
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
. ......+.+++.+||+.||++|||+.|++++
T Consensus 246 ~---~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 W---RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp G---GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred c---CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1223456788889999999999999999985
No 193
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=7.4e-38 Score=339.55 Aligned_cols=189 Identities=27% Similarity=0.417 Sum_probs=149.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeC-----CceEEEe
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~ 413 (635)
.+.||+|+||+||+|... +++.||||++...... .+.+.+|++++.++ +||||+++++++... ...|+||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCcccCceEEEEE
Confidence 468999999999999865 5788999999765333 35688999999999 999999999998543 4689999
Q ss_pred eeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCC
Q 006696 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+. |+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 137 e~~~-~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 137 EIAD-SDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CCCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred eccc-cchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 9984 6999998642 34999999999999999999999998 9999999999999999999999999998754
Q ss_pred CC-------------------------------CCCCCCCcccCcccc-cCCCCCCccchHhHHHHHHHHHh--------
Q 006696 494 VP-------------------------------ATPSRSAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLT-------- 533 (635)
Q Consensus 494 ~~-------------------------------~~~~~t~~y~aPE~~-~~~~~~~~~DvwS~Gv~l~ellt-------- 533 (635)
.. ....+|+.|+|||++ ....++.++|||||||++|||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~ 287 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSS
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccc
Confidence 22 123468889999986 56679999999999999999999
Q ss_pred ---CCCCCCCC
Q 006696 534 ---GKAPLQSP 541 (635)
Q Consensus 534 ---g~~p~~~~ 541 (635)
|+++|.+.
T Consensus 288 ~~~~~p~f~g~ 298 (458)
T 3rp9_A 288 HADRGPLFPGS 298 (458)
T ss_dssp GGGCCCSCC--
T ss_pred cccccccCCCC
Confidence 66666543
No 194
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=7.5e-38 Score=318.98 Aligned_cols=239 Identities=21% Similarity=0.345 Sum_probs=195.7
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccC----CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||++...+ ++.||+|++..... ..+.+.+|+.+++.+ +||||+++++++...+..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 98 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEEEEEEecCC
Confidence 4689999999999999764 67899999876532 235678899999999 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC--
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 99 RRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp TCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 99999988642 34899999999999999999999998 999999999999999999999999998765422
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 496 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 --~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....+++.|+|||.+.+..++.++||||||+++|||++|+.||...... ............
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~----------- 233 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------ETYLRIKKNEYS----------- 233 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTTCCC-----------
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHhhccCC-----------
Confidence 2345788999999999989999999999999999999999999754321 111111111110
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 608 (635)
........+.+++.+||+.||++|||++|++++-
T Consensus 234 -~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 234 -IPKHINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred -CccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 0011223567788899999999999999999863
No 195
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=320.98 Aligned_cols=241 Identities=25% Similarity=0.408 Sum_probs=192.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|... +++.||+|++.... ..+.+.+|+.++.++ +||||+++++++...+..++||||+++|+|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 468999999999999976 47889999997643 456788999999999 999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----CC
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----AT 497 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~----~~ 497 (635)
.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 112 ~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (314)
T 3com_A 112 SDIIRLR----NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 184 (314)
T ss_dssp HHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence 9998632 234899999999999999999999998 999999999999999999999999998665432 23
Q ss_pred CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChH
Q 006696 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 577 (635)
Q Consensus 498 ~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 577 (635)
..+++.|+|||++.+..++.++||||||+++|||++|+.||...... ...... ....... .....
T Consensus 185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~-~~~~~~~--------~~~~~ 249 (314)
T 3com_A 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM------RAIFMI-PTNPPPT--------FRKPE 249 (314)
T ss_dssp CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHH-HHSCCCC--------CSSGG
T ss_pred cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH------HHHHHH-hcCCCcc--------cCCcc
Confidence 45788999999999999999999999999999999999999753311 111111 1111000 00111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 578 EEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 578 ~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.....+.+++.+||+.||++|||+.|++++
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 223467788899999999999999999873
No 196
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.9e-38 Score=353.75 Aligned_cols=239 Identities=24% Similarity=0.314 Sum_probs=196.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|+.. +++.||||+++... .....+..|..++..+.+||||+++++++.+.+..|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 468999999999999976 46789999997542 2345677888999888789999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC---
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~--- 494 (635)
+|+|.++++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 426 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 426 GGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999975322
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 495 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 495 -~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
..+..||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+.. .....+......
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~~~~----------- 560 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHNVA----------- 560 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHSSCCC-----------
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCCCC-----------
Confidence 23456899999999999999999999999999999999999999864322 222233222110
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNM-----DEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~-----~evl~~ 607 (635)
........+.+++.+||+.||++||++ +||+++
T Consensus 561 -~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 561 -YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred -CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 011223456788889999999999998 777663
No 197
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=325.37 Aligned_cols=255 Identities=22% Similarity=0.334 Sum_probs=191.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC------HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 93 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFDF 93 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEEC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCCceEEEEEc
Confidence 578999999999999975 4789999998754221 24678899999999 899999999999999999999999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+++ +|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 94 ~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 94 MET-DLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp CSE-EHHHHHTTC----CSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred CCC-CHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 986 888888643 234888999999999999999999998 999999999999999999999999999876432
Q ss_pred C----CCCCCCcccCcccccCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHh---hhccccccch
Q 006696 496 A----TPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV---REEWTAEVFD 567 (635)
Q Consensus 496 ~----~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d 567 (635)
. ...+|+.|+|||++.+. .++.++|||||||++|||++|.+||.+....+. +........ .+.|......
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ--LTRIFETLGTPTEEQWPDMCSL 243 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTTSSSTTSS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHcCCCChhhhhhhccC
Confidence 2 34578899999999764 488999999999999999999999976432111 111111100 0011000000
Q ss_pred hhh---hcccC------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006696 568 VEL---MRFQN------IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 568 ~~~---~~~~~------~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 608 (635)
+.. ...+. .......+.+++.+||+.||++|||++|++++-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 000 00000 012235678888999999999999999999853
No 198
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=5.8e-38 Score=324.98 Aligned_cols=252 Identities=23% Similarity=0.349 Sum_probs=197.2
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||.||+|.+. ++..||||++..... ....+.+|+.++.++ +||||+++++++...+..++|||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcCCCCcEEEEe
Confidence 468999999999999842 466899999965432 245688899999999 99999999999999999999999
Q ss_pred eccCCChhccccCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC---CCCeEEeccCCC
Q 006696 415 YFASGSLSTLLHGNRGA--GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLT 489 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~---~~~~ki~DfGla 489 (635)
|+++|+|.+++...... ....+++..+..++.|++.||.|||+.+ |+||||||+||+++. +..+||+|||++
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~ 190 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEECccccc
Confidence 99999999999754321 1245899999999999999999999998 999999999999984 456999999988
Q ss_pred CCCCCC------CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006696 490 PLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 490 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
...... ....+++.|+|||++.+..++.++||||||+++|||++ |..||...... ............
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~~~~~~~~ 264 (327)
T 2yfx_A 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVTSGGRM 264 (327)
T ss_dssp HHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHHTTCCC
T ss_pred cccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH------HHHHHHhcCCCC
Confidence 643221 22345778999999998899999999999999999998 99999754321 111111111100
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 563 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
.........+.+++.+||+.||++||++.|++++|+.+.+..
T Consensus 265 -----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 265 -----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 001122346778889999999999999999999999987644
No 199
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2e-37 Score=317.28 Aligned_cols=241 Identities=24% Similarity=0.371 Sum_probs=197.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc--CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++.++ +||||+++++++......++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 467999999999999864 57889999997653 2357789999999999 9999999999999999999999999999
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 106 ~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 176 (303)
T 3a7i_A 106 SALDLLEP------GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176 (303)
T ss_dssp EHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred cHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence 99999863 34899999999999999999999998 999999999999999999999999998665432
Q ss_pred CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006696 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 496 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
....+++.|+|||++.+..++.++||||||+++|||++|+.||...... ..... ........ .
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~-~~~~~~~~-~--------- 239 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------KVLFL-IPKNNPPT-L--------- 239 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHH-HHHSCCCC-C---------
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH------HHHHH-hhcCCCCC-C---------
Confidence 2345788899999999999999999999999999999999999754321 11111 11111100 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 006696 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610 (635)
Q Consensus 576 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 610 (635)
.......+.+++.+||+.||++|||+.|++++..-
T Consensus 240 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~ 274 (303)
T 3a7i_A 240 EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274 (303)
T ss_dssp CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHH
T ss_pred ccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhh
Confidence 01122457788889999999999999999986543
No 200
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=6.9e-38 Score=319.19 Aligned_cols=243 Identities=23% Similarity=0.297 Sum_probs=192.3
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+||+|+||.||+|... ++..||+|++..... ..+.+.+|+.++..+ +||||+++++++...+..++||||+++++|
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 47999999999999964 577899999876533 356788999999999 999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC-CCCeEEeccCCCCCCCCC----C
Q 006696 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-DLDGCISDFGLTPLMNVP----A 496 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~-~~~~ki~DfGla~~~~~~----~ 496 (635)
.+++.... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++...... .
T Consensus 107 ~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 181 (295)
T 2clq_A 107 SALLRSKW--GPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181 (295)
T ss_dssp HHHHHHTT--CCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred HHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence 99997543 2234778999999999999999999998 999999999999988 899999999998765432 2
Q ss_pred CCCCCCcccCcccccCCC--CCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006696 497 TPSRSAGYRAPEVIETRK--HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 497 ~~~~t~~y~aPE~~~~~~--~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
...+++.|+|||++.+.. ++.++||||||+++|||++|+.||......+ ............. .
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~----------~ 246 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ-----AAMFKVGMFKVHP----------E 246 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH-----HHHHHHHHHCCCC----------C
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh-----HHHHhhccccccc----------c
Confidence 345788999999997653 7899999999999999999999996432111 0000000000000 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 575 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
........+.+++.+||+.||++|||+.|++++
T Consensus 247 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 247 IPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011223456788889999999999999999863
No 201
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5.6e-38 Score=326.21 Aligned_cols=238 Identities=21% Similarity=0.349 Sum_probs=195.3
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccC----CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||++...+ ++.||+|++..... ..+.+.+|+.+++++ +||||+++++++.+.+..++||||++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 124 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCR 124 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEecCC
Confidence 4689999999999999764 67899999876532 245678899999999 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC--
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 125 ~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 125 RRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp TCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 99999988642 34899999999999999999999998 999999999999999999999999999765422
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 496 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 --~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....+++.|+|||++.+..++.++||||||+++|||++|+.||..... .............
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~----------- 259 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL------KETYLRIKKNEYS----------- 259 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCC-----------
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH------HHHHHHHhcCCCC-----------
Confidence 234578899999999999999999999999999999999999975431 1111111111110
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
........+.+++.+||+.||++|||++|++++
T Consensus 260 -~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 260 -IPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 001122356778889999999999999999985
No 202
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.4e-37 Score=341.29 Aligned_cols=241 Identities=21% Similarity=0.338 Sum_probs=192.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc--------------CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV--------------VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD 407 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--------------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~ 407 (635)
.+.||+|+||+||+|... ++..||+|++.... ...+.+.+|+.++.++ +||||+++++++.+..
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 119 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVFEDKK 119 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCC
Confidence 478999999999999976 46789999997643 2245688999999999 8999999999999999
Q ss_pred ceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCC---CeEEe
Q 006696 408 EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCIS 484 (635)
Q Consensus 408 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~---~~ki~ 484 (635)
..++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEEEE
Confidence 999999999999999988642 34899999999999999999999998 99999999999998876 69999
Q ss_pred ccCCCCCCCCC---CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006696 485 DFGLTPLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 485 DfGla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
|||++...... ....+|+.|+|||++.+ .++.++||||+||++|+|++|..||.+.... .....+.....
T Consensus 192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~ 264 (504)
T 3q5i_A 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ------DIIKKVEKGKY 264 (504)
T ss_dssp CCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCC
T ss_pred ECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCC
Confidence 99999766543 24468999999999874 6999999999999999999999999865422 12222222111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.. + ...+. .....+.+++.+||+.||.+|||++|++++
T Consensus 265 ~~---~--~~~~~---~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 265 YF---D--FNDWK---NISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CC---C--HHHHT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CC---C--ccccC---CCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 10 0 00011 123457788889999999999999999985
No 203
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.9e-38 Score=343.36 Aligned_cols=241 Identities=23% Similarity=0.378 Sum_probs=196.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... +++.||||++.... .....+.+|+.+++++ +||||+++++++...+..++||||+.
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 109 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYT 109 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 578999999999999976 68899999997542 2456789999999999 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE---cCCCCeEEeccCCCCCCCC
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~ki~DfGla~~~~~ 494 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++.....
T Consensus 110 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 110 GGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp SCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999988643 34899999999999999999999998 9999999999999 5678999999999876654
Q ss_pred CC---CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006696 495 PA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 495 ~~---~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
.. ...+|+.|+|||++.+ .++.++||||+||++|||++|..||...... .....+....+... ..
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~~-----~~ 249 (484)
T 3nyv_A 182 SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY------DILKKVEKGKYTFE-----LP 249 (484)
T ss_dssp CCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCCC-----SG
T ss_pred ccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCCCCCC-----Cc
Confidence 33 2358899999999976 6999999999999999999999999865321 11222222211110 00
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.. ......+.+++.+||+.||++|||+.|++++
T Consensus 250 ~~---~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 QW---KKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GG---GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cc---ccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 11 1223456788889999999999999999985
No 204
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.4e-37 Score=340.36 Aligned_cols=245 Identities=21% Similarity=0.349 Sum_probs=192.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc---CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV---VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|... ++..||+|++.... .....+.+|+.+++++ +||||+++++++.+....++||||+++
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 120 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYKG 120 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999976 57889999997653 2356788999999999 999999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCC---CCeEEeccCCCCCCCCC
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~---~~~ki~DfGla~~~~~~ 495 (635)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||++......
T Consensus 121 g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 121 GELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 9999988643 34899999999999999999999998 9999999999999764 55999999999765433
Q ss_pred ---CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 496 ---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
....+|+.|+|||++. ..++.++||||+||++|+|++|..||...... .....+........ .+ .
T Consensus 193 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~~--~~---~ 260 (494)
T 3lij_A 193 KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ------EILRKVEKGKYTFD--SP---E 260 (494)
T ss_dssp BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCCC--SG---G
T ss_pred ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCCC--ch---h
Confidence 2346899999999986 46999999999999999999999999865422 22222222211100 00 1
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHH
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEV 611 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~--L~~~ 611 (635)
+. .....+.+++.+||+.||++|||+.|++++ +...
T Consensus 261 ~~---~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 261 WK---NVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp GT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred cc---cCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 11 123456788889999999999999999974 4443
No 205
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.1e-37 Score=330.16 Aligned_cols=193 Identities=22% Similarity=0.316 Sum_probs=165.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCC-----ceeceeEEEEeCCceEEEeeec
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-----NVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~-----niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+|+||+||+|... +++.||||+++........+..|+.++..+.+|+ +|+++++++...+..++||||+
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 138 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC
Confidence 468999999999999975 4678999999765444566778888888885566 4999999999999999999999
Q ss_pred cCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--cCCCCceecCCCCCCEEEc--CCCCeEEeccCCCCCC
Q 006696 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS--MGGPKFTHGNIKASNVLIN--QDLDGCISDFGLTPLM 492 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~--~~~~~ivHrDlk~~NIll~--~~~~~ki~DfGla~~~ 492 (635)
. |+|.+++.... ...+++..+..++.|++.||.|||. .+ |+||||||+|||++ .++.+||+|||+++..
T Consensus 139 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~~~---ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~ 211 (382)
T 2vx3_A 139 S-YNLYDLLRNTN---FRGVSLNLTRKFAQQMCTALLFLATPELS---IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211 (382)
T ss_dssp C-CBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHTSTTTC---EECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred C-CCHHHHHhhcC---cCCCCHHHHHHHHHHHHHHHHHhccCCCC---EEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence 6 59999987543 2348999999999999999999995 45 99999999999995 4788999999999776
Q ss_pred CCC-CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCC
Q 006696 493 NVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542 (635)
Q Consensus 493 ~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~ 542 (635)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+
T Consensus 212 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 212 GQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp TCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 543 34568899999999999999999999999999999999999998654
No 206
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.3e-37 Score=311.06 Aligned_cols=238 Identities=21% Similarity=0.332 Sum_probs=189.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++..+ +||||+++++++...+..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCeEEEEEeccC
Confidence 468999999999999976 68899999987542 2345788999999999 89999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 95 GGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp SCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred CCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 99999999643 24899999999999999999999998 9999999999999999999999999987765432
Q ss_pred --CCCCCCcccCcccccCCCC-CCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 497 --TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 497 --~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
...+++.|+|||.+.+..+ +.++||||||+++|||++|+.||..... ......+......
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~----------- 229 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV------PTLFKKIRGGVFY----------- 229 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC-----------
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH------HHHHHHhhcCccc-----------
Confidence 3457888999999988765 6899999999999999999999975321 1111111111100
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
........+.+++.+||+.||++|||+.|++++
T Consensus 230 -~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 230 -IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -CchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 001122456788889999999999999999985
No 207
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=5.6e-37 Score=316.85 Aligned_cols=241 Identities=24% Similarity=0.377 Sum_probs=187.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---------CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
.+.||+|+||.||+|... +++.||||++..... ....+.+|++++.++ +||||+++++++...+ .++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~~lv 92 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDAED-YYIV 92 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEESSS-EEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEcCCc-eEEE
Confidence 578999999999999975 467899999865421 123578999999999 9999999999987654 8999
Q ss_pred eeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCC---eEEeccCCC
Q 006696 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLT 489 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~---~ki~DfGla 489 (635)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++
T Consensus 93 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 93 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred EecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 9999999999988642 34899999999999999999999998 999999999999987665 999999999
Q ss_pred CCCCCCC---CCCCCCcccCccccc---CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccc
Q 006696 490 PLMNVPA---TPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563 (635)
Q Consensus 490 ~~~~~~~---~~~~t~~y~aPE~~~---~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (635)
....... ...+++.|+|||++. ...++.++|||||||++|||++|..||....... .+...... ... .
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~---~~~-~ 238 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQITS---GKY-N 238 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHHH---TCC-C
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHHh---Ccc-c
Confidence 8764432 224788999999974 5678999999999999999999999997654322 22111111 110 0
Q ss_pred ccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006696 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 564 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 606 (635)
..+.. .......+.+++.+||+.||++|||+.|+++
T Consensus 239 --~~~~~-----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 239 --FIPEV-----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --CCHHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --cCchh-----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00000 0112346778889999999999999999985
No 208
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.1e-38 Score=331.86 Aligned_cols=251 Identities=21% Similarity=0.302 Sum_probs=175.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeC------CceEEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK------DEKLLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lv 412 (635)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|+.+++.+ +||||+++++++... ...++|
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~~lv 112 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLV 112 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCccccCCeEEEE
Confidence 468999999999999864 5788999999764332 45677899999999 899999999998754 567999
Q ss_pred eeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCC
Q 006696 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
+||+ +++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 113 THLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp EECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-------
T ss_pred eccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 9999 6799998863 24999999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC-CCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---ccccccch
Q 006696 493 NVPA-TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE---EWTAEVFD 567 (635)
Q Consensus 493 ~~~~-~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d 567 (635)
.... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+. ...+...... .....+..
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ---LKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCHHHHTTCCC
T ss_pred cccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHHhhh
Confidence 5432 3467899999999977 6789999999999999999999999986542111 1111111100 00000000
Q ss_pred h-------hhhc--ccChH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 568 V-------ELMR--FQNIE----EEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 568 ~-------~~~~--~~~~~----~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
. .+.. ..... .....+.+++.+||+.||++|||+.|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 0000 00000 112457788899999999999999999985
No 209
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.1e-37 Score=323.45 Aligned_cols=252 Identities=16% Similarity=0.253 Sum_probs=196.7
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCH------------------HHHHHHHHHHHhhCCCCceeceeEEEE
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGK------------------RDFEQQMEIVGRVGQHPNVVPLRAYYY 404 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~------------------~~~~~e~~~l~~l~~h~niv~l~~~~~ 404 (635)
.+.||+|+||.||+|.. +++.||+|++....... +.+.+|+.++.++ +||||+++++++.
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~ 113 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTTBCCCSEEEE
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCCcceEEEEEe
Confidence 46799999999999999 79999999997543211 7889999999999 8999999999999
Q ss_pred eCCceEEEeeeccCCChhcc------ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCceecCCCCCCEEEcC
Q 006696 405 SKDEKLLVYDYFASGSLSTL------LHGNRGAGRTPLDWETRVKILLGTARGVAHIHS-MGGPKFTHGNIKASNVLINQ 477 (635)
Q Consensus 405 ~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrDlk~~NIll~~ 477 (635)
+.+..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+ .+ |+||||||+||+++.
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILMDK 187 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEECT
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEEcC
Confidence 99999999999999999999 5432 13459999999999999999999999 87 999999999999999
Q ss_pred CCCeEEeccCCCCCCCCC--CCCCCCCcccCcccccCC-CCCC-ccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHH
Q 006696 478 DLDGCISDFGLTPLMNVP--ATPSRSAGYRAPEVIETR-KHSH-KSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWV 553 (635)
Q Consensus 478 ~~~~ki~DfGla~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 553 (635)
++.+||+|||++...... ....++..|+|||++.+. .++. ++||||||+++|||++|..||...... ....
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~ 262 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-----VELF 262 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-----HHHH
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HHHH
Confidence 999999999999765332 344578899999999887 5666 999999999999999999999865431 1112
Q ss_pred HHHhhhcccccc----chhhhhc---ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 554 QSVVREEWTAEV----FDVELMR---FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 554 ~~~~~~~~~~~~----~d~~~~~---~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
............ +...... ..........+.+++.+||+.||++|||+.|++++
T Consensus 263 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 222111110000 0000000 00001223467788889999999999999999873
No 210
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.9e-37 Score=324.32 Aligned_cols=250 Identities=21% Similarity=0.319 Sum_probs=186.1
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC------------HHHHHHHHHHHHhhCCCCceeceeEEEEeCC---
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG------------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--- 407 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~------------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--- 407 (635)
.+.||+|+||.||+|...++..||||++...... .+.+.+|++++.++ +||||+++++++...+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 105 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFVHFEEPA 105 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEEECCTTT
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceeeeEEeccCCC
Confidence 4689999999999999888999999998654321 26788999999999 8999999999986533
Q ss_pred --ceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEec
Q 006696 408 --EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485 (635)
Q Consensus 408 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~D 485 (635)
..++||||++ |+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 106 MHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp CCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred cceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCCCEEEEe
Confidence 5799999998 5888888643 235899999999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCCC---CCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006696 486 FGLTPLMNVPA---TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 486 fGla~~~~~~~---~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
||++....... ...+++.|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+.....
T Consensus 178 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~ 251 (362)
T 3pg1_A 178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN------QLNKIVEVVG 251 (362)
T ss_dssp TTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHHHC
T ss_pred cCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHcC
Confidence 99997544322 3457888999999877 678999999999999999999999998643211 1111110000
Q ss_pred ccc--------------cchhhhhccc------ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 562 TAE--------------VFDVELMRFQ------NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 562 ~~~--------------~~d~~~~~~~------~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
... .......... ........+.+++.+||+.||++|||+.|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000 0000000000 001123457788999999999999999999984
No 211
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7.6e-38 Score=324.37 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=185.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|... +++.||+|+++..... .+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEYAEN 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHc-CCCCcceEEEEEecCCEEEEEEecCCC
Confidence 468999999999999865 5788999999754332 34577899999999 999999999999999999999999985
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEc-----CCCCeEEeccCCCCCCC
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-----QDLDGCISDFGLTPLMN 493 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~-----~~~~~ki~DfGla~~~~ 493 (635)
+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||++....
T Consensus 118 -~L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 118 -DLKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp -EHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred -CHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 999998743 24899999999999999999999998 99999999999994 45569999999987654
Q ss_pred CC----CCCCCCCcccCcccccCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---cccccc
Q 006696 494 VP----ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE---EWTAEV 565 (635)
Q Consensus 494 ~~----~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 565 (635)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+. +.......... .+....
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ--LFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTTSTTGG
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH--HHHHHHHhCCCchhhhhhhh
Confidence 22 233568899999999875 489999999999999999999999976432111 11111110000 000000
Q ss_pred ----chhhhh--cccChH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 566 ----FDVELM--RFQNIE-----EEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 566 ----~d~~~~--~~~~~~-----~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
+..... ...... .....+.+++.+||+.||++|||++|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000000 000001 122457788999999999999999999873
No 212
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.2e-37 Score=314.93 Aligned_cols=254 Identities=22% Similarity=0.329 Sum_probs=191.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|... +++.||+|++..... ....+.+|++++.++ +||||+++++++..++..++||||+.
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~- 85 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLH- 85 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHc-CCCCeeeEEEEEecCCceEEEEEccc-
Confidence 467999999999999976 588999999875432 236788999999999 99999999999999999999999998
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC---
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 86 QDLKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp EEHHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred CCHHHHHHhhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 59999987543 234889999999999999999999998 999999999999999999999999988654322
Q ss_pred -CCCCCCCcccCcccccCCC-CCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc--cccc-----cc
Q 006696 496 -ATPSRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREE--WTAE-----VF 566 (635)
Q Consensus 496 -~~~~~t~~y~aPE~~~~~~-~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~ 566 (635)
....+++.|+|||++.+.. ++.++||||||+++|||++|+.||......+ .+........... .... .+
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIFRTLGTPDEVVWPGVTSMPDY 237 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH--HHHHHHHHhCCCchhhhhHhhcCccc
Confidence 2335788999999998765 7999999999999999999999998643211 0111111100000 0000 00
Q ss_pred hhhhhc--ccCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006696 567 DVELMR--FQNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 567 d~~~~~--~~~~----~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 606 (635)
...... .... ......+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 0000 112346778888999999999999999988
No 213
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=7e-38 Score=320.37 Aligned_cols=242 Identities=21% Similarity=0.333 Sum_probs=190.2
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc-CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCC
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||.||+|.... +..||+|++.... ...+.+.+|++++.++ +||||+++++++..++..++||||+++++
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CEEEEEECCTTEE
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeEEEEEEeCCCCc
Confidence 4679999999999999764 7889999987553 3457788999999999 99999999999999999999999999999
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCC----CCCC
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM----NVPA 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~----~~~~ 496 (635)
|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++... ....
T Consensus 103 l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (302)
T 2j7t_A 103 VDAIMLELD----RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD 175 (302)
T ss_dssp HHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence 999886422 34899999999999999999999998 999999999999999999999999986432 1223
Q ss_pred CCCCCCcccCcccc-----cCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006696 497 TPSRSAGYRAPEVI-----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 497 ~~~~t~~y~aPE~~-----~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
...+++.|+|||++ ....++.++||||||+++|||++|+.||..... .............. .
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~-~------ 242 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSDPPT-L------ 242 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSCCCC-C------
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH------HHHHHHHhccCCcc-c------
Confidence 44678899999998 466789999999999999999999999975432 11122222111110 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.........+.+++.+||+.||++|||+.|++++
T Consensus 243 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 243 --LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp --SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred --CCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0111223457788889999999999999999863
No 214
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.8e-37 Score=315.21 Aligned_cols=244 Identities=22% Similarity=0.324 Sum_probs=177.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC--HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|... +++.||+|+++..... ......|...+.+..+||||+++++++...+..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-
Confidence 468999999999999974 6788999999765332 223333444433334999999999999999999999999975
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC--
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
+|.+++..... ....+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||++.......
T Consensus 91 ~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 166 (290)
T 3fme_A 91 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166 (290)
T ss_dssp EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC------------
T ss_pred chHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccccccccc
Confidence 88777754221 134599999999999999999999998 8 9999999999999999999999999997664432
Q ss_pred -CCCCCCcccCcccc----cCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006696 497 -TPSRSAGYRAPEVI----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 497 -~~~~t~~y~aPE~~----~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
...+|+.|+|||++ .+..++.++||||||+++|||++|+.||..... ................
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~------- 234 (290)
T 3fme_A 167 DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSPQL------- 234 (290)
T ss_dssp ---CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCCCC-------
T ss_pred cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-----hHHHHHHHhccCCCCc-------
Confidence 23578899999996 566789999999999999999999999974321 1111111111111100
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 606 (635)
........+.+++.+||+.||++|||+.|+++
T Consensus 235 ---~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 ---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 00122345778888999999999999999998
No 215
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.1e-37 Score=330.81 Aligned_cols=187 Identities=26% Similarity=0.398 Sum_probs=158.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeC-----CceEEEe
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~ 413 (635)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|+++++++ +||||+++++++... ...|+||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 109 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVL 109 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecCCCCcCCeEEEEE
Confidence 468999999999999975 4678999999765333 35688999999999 899999999999776 5689999
Q ss_pred eeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCC
Q 006696 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||++ |+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 110 e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 110 EIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp ECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred ecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 9986 5999999742 34999999999999999999999998 9999999999999999999999999997654
Q ss_pred CC--------------------------CCCCCCCcccCcccc-cCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 006696 494 VP--------------------------ATPSRSAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539 (635)
Q Consensus 494 ~~--------------------------~~~~~t~~y~aPE~~-~~~~~~~~~DvwS~Gv~l~elltg~~p~~ 539 (635)
.. ....+|+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 32 234578999999986 56679999999999999999998655543
No 216
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.3e-37 Score=323.62 Aligned_cols=246 Identities=19% Similarity=0.273 Sum_probs=168.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEe----CCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~~~ 417 (635)
.++||+|+||+||+|... +++.||+|++... ....+|+..+.+..+||||+++++++.. ....++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 357999999999999976 5889999998653 2334455554455599999999999976 445789999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC---CCCeEEeccCCCCCCCC
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNV 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~---~~~~ki~DfGla~~~~~ 494 (635)
+|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++.....
T Consensus 110 gg~L~~~l~~~~---~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 110 GGELFSRIQERG---DQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp TEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 999999997543 235999999999999999999999998 999999999999986 45599999999976543
Q ss_pred C--CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 495 P--ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 495 ~--~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
. ....+|+.|+|||++.+..++.++||||||+++|||++|+.||............ ......... .. .
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--~~~~~~~~~-----~~---~ 253 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM--KRRIRLGQY-----GF---P 253 (336)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CC---C
T ss_pred cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH--HHhhhcccc-----cc---C
Confidence 3 2345788999999998888999999999999999999999999765433221100 000000000 00 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 608 (635)
..........+.+++.+||+.||++|||++|++++-
T Consensus 254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 254 NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 001112234577888899999999999999999943
No 217
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.5e-37 Score=324.78 Aligned_cols=247 Identities=21% Similarity=0.312 Sum_probs=185.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCC------ceEEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------EKLLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lv 412 (635)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|+.+++.+ +||||+++++++...+ ..++|
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~lv 108 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIV 108 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-CCCCccceEEeeccccccccccceEEE
Confidence 467999999999999865 5788999999765333 34677899999999 9999999999997665 67999
Q ss_pred eeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCC
Q 006696 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+++ +|.+++.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 109 ~e~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 109 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp EECCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred EEcCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 999975 78888752 3889999999999999999999998 999999999999999999999999999876
Q ss_pred CCC---CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh-----------
Q 006696 493 NVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR----------- 558 (635)
Q Consensus 493 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~----------- 558 (635)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+ ....+..
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID------QWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHC-CCCCCHHHHT
T ss_pred ccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHhCCCCHHHHH
Confidence 433 23457889999999999999999999999999999999999998653211 1111110
Q ss_pred -----------hc--cccccchhhhhc------ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 559 -----------EE--WTAEVFDVELMR------FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 559 -----------~~--~~~~~~d~~~~~------~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.. +....+...... ..........+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00 000000000000 00012235678899999999999999999999984
No 218
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.1e-37 Score=335.26 Aligned_cols=245 Identities=23% Similarity=0.363 Sum_probs=184.3
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||+||.+...+++.||||++.... .+.+.+|+.++.++.+||||+++++++.+.+..++||||++ |+|.
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 46799999999987777779999999987532 35678899999887789999999999999999999999996 6999
Q ss_pred ccccCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCC-------------CCeEEeccC
Q 006696 423 TLLHGNRGAGR--TPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-------------LDGCISDFG 487 (635)
Q Consensus 423 ~~l~~~~~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~-------------~~~ki~DfG 487 (635)
+++........ ...++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 99975432111 11133456789999999999999998 9999999999999754 489999999
Q ss_pred CCCCCCCCC--------CCCCCCcccCcccccC-------CCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhH
Q 006696 488 LTPLMNVPA--------TPSRSAGYRAPEVIET-------RKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPR 551 (635)
Q Consensus 488 la~~~~~~~--------~~~~t~~y~aPE~~~~-------~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~ 551 (635)
+++...... ...||+.|+|||++.+ ..++.++|||||||++|||++ |..||......+
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------ 247 (434)
T 2rio_A 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------ 247 (434)
T ss_dssp TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH------
T ss_pred cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH------
Confidence 998764422 2357899999999975 568999999999999999999 999997432111
Q ss_pred HHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006696 552 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 552 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 606 (635)
..+.......... ...........+.+++.+||+.||++|||+.|+++
T Consensus 248 --~~i~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 --SNIIRGIFSLDEM-----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHHHHTCCCCCCC-----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHhcCCCCcccc-----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111111110000 01112344567888999999999999999999986
No 219
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.1e-37 Score=315.15 Aligned_cols=249 Identities=20% Similarity=0.308 Sum_probs=194.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEe--CCceEEEeeec
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~e~~ 416 (635)
.+.||+|+||.||++... +++.||+|++...... .+.+.+|++++.++ +||||+++++++.. ....++||||+
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 467999999999999975 5788999999765433 35688899999999 99999999998864 56789999999
Q ss_pred cCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC
Q 006696 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG--GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
++|+|.+++..... ....+++..+..++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 90 EGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168 (279)
T ss_dssp TTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC--
T ss_pred CCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecc
Confidence 99999999975332 2345899999999999999999999976 23499999999999999999999999999876543
Q ss_pred CC----CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006696 495 PA----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 495 ~~----~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
.. ...+++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+.... ....
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~i~~~~-~~~~----- 236 (279)
T 2w5a_A 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK------ELAGKIREGK-FRRI----- 236 (279)
T ss_dssp -CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-CCCC-----
T ss_pred ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH------HHHHHHhhcc-cccC-----
Confidence 32 124788899999999989999999999999999999999999754321 1111111111 1000
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 006696 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 610 (635)
.......+.+++.+||+.||++|||+.|+++++..
T Consensus 237 -----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 237 -----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 01223467788889999999999999999987653
No 220
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.3e-37 Score=328.74 Aligned_cols=258 Identities=24% Similarity=0.367 Sum_probs=189.2
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCc------eEEEeeec
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE------KLLVYDYF 416 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~------~~lv~e~~ 416 (635)
.+.||+|+||.||+|+..++..||+|++.... ....+|+++++.+ +||||+++++++..... .++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~---~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK---RFKNRELQIMRIV-KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCT---TSCCHHHHHHHTC-CCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCc---chHHHHHHHHHhC-CCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 47899999999999999888889999886543 2234689999999 99999999999976543 78999999
Q ss_pred cCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEc-CCCCeEEeccCCCCCCCCC
Q 006696 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~-~~~~~ki~DfGla~~~~~~ 495 (635)
+++.+..... ... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 121 ~~~l~~~~~~-~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 121 PETVYRASRH-YAK-LKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp SEEHHHHHHH-HHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred CccHHHHHHH-HHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 8754333321 111 1345899999999999999999999998 99999999999999 7999999999999765332
Q ss_pred ---CCCCCCCcccCcccccCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHH----------hhhcc
Q 006696 496 ---ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSV----------VREEW 561 (635)
Q Consensus 496 ---~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~----------~~~~~ 561 (635)
....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+..+. +....... ....+
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~p~~~~~~~~~~~~ 273 (394)
T 4e7w_A 196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ--LVEIIKVLGTPSREQIKTMNPNY 273 (394)
T ss_dssp CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHHCGGG
T ss_pred CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHhhChhh
Confidence 234578899999998765 589999999999999999999999986542211 11111100 00000
Q ss_pred ccccchhhhhcccCh-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHHhh
Q 006696 562 TAEVFDVELMRFQNI-----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVRQ 613 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~--L~~~~~ 613 (635)
....+.. . ..... ......+.+++.+||+.||++|||+.|++++ ++++..
T Consensus 274 ~~~~~~~-~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 274 MEHKFPQ-I-RPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp SSSCCCC-C-CCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred hhhcccc-c-cCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 0000000 0 00000 1123467888899999999999999999985 555443
No 221
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=9.4e-38 Score=322.00 Aligned_cols=246 Identities=20% Similarity=0.323 Sum_probs=189.7
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccC---CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||+|...+ .+|+|+++.... ..+.+.+|+.++.++ +||||+++++++...+..++||||++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceEEEeecccCC
Confidence 4689999999999999763 599999875432 235677899999998 9999999999999999999999999999
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC----
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++ ++.+||+|||++......
T Consensus 115 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 115 TLYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp EHHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred cHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 9999997532 34899999999999999999999998 99999999999998 689999999998654311
Q ss_pred -----CCCCCCCcccCcccccC---------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006696 496 -----ATPSRSAGYRAPEVIET---------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 496 -----~~~~~t~~y~aPE~~~~---------~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
....+++.|+|||++.+ ..++.++||||||+++|||++|+.||...... ....... ...
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~-~~~ 259 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE------AIIWQMG-TGM 259 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH------HHHHHHH-TTC
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHhc-cCC
Confidence 12336788999999874 34788999999999999999999999754321 1111111 111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcC
Q 006696 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 615 (635)
...... ......+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 260 ~~~~~~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 260 KPNLSQ---------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCCCC---------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCCc---------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 111100 011234678888999999999999999999999988654
No 222
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6e-37 Score=312.79 Aligned_cols=242 Identities=19% Similarity=0.350 Sum_probs=194.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC----------CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLL 411 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~l 411 (635)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.++.+||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 467999999999999975 478899999975431 134577899999999669999999999999999999
Q ss_pred EeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCC
Q 006696 412 VYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL 491 (635)
Q Consensus 412 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~ 491 (635)
||||+++++|.+++... ..+++..+..++.||+.||+|||+.+ ++||||||+||+++.++.+||+|||++..
T Consensus 102 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccchhh
Confidence 99999999999999742 34899999999999999999999998 99999999999999999999999999876
Q ss_pred CCCCC---CCCCCCcccCccccc------CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006696 492 MNVPA---TPSRSAGYRAPEVIE------TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 492 ~~~~~---~~~~t~~y~aPE~~~------~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
..... ...+++.|+|||++. ...++.++||||||+++|||++|..||..... ......+......
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~ 247 (298)
T 1phk_A 174 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------MLMLRMIMSGNYQ 247 (298)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC
T ss_pred cCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH------HHHHHHHhcCCcc
Confidence 54332 345788999999985 45688999999999999999999999975431 1112222221111
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006696 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 563 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 606 (635)
.. .+........+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 248 FG--------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CC--------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cC--------cccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00 0011123346778888999999999999999987
No 223
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.6e-37 Score=346.86 Aligned_cols=246 Identities=22% Similarity=0.374 Sum_probs=197.2
Q ss_pred hccccccCceEEEEEEecC----CCeEEEEEeecccCC--HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeec
Q 006696 343 AEVLGKGSYGTAYKAVLEE----STTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+|+||.||+|.+.. +..||+|+++..... .+.+.+|+.++.++ +||||+++++++ .++..++||||+
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~-~~~~~~lv~E~~ 472 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVI-TENPVWIIMELC 472 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEE-ecCceEEEEEcC
Confidence 5789999999999999753 346899988654322 35788999999999 999999999998 456789999999
Q ss_pred cCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC
Q 006696 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 496 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~ 496 (635)
++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 473 ~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 473 TLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp TTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred CCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 9999999997432 34899999999999999999999998 9999999999999999999999999998765432
Q ss_pred C-----CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006696 497 T-----PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 497 ~-----~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
. ..+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+ ....+.....
T Consensus 546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------~~~~i~~~~~--------- 610 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND------VIGRIENGER--------- 610 (656)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHHTCC---------
T ss_pred ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHcCCC---------
Confidence 1 234678999999998899999999999999999997 999997543221 1111111110
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhc
Q 006696 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 614 (635)
..........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 611 --~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 611 --LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 011112234677888999999999999999999999998754
No 224
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.9e-38 Score=321.46 Aligned_cols=253 Identities=24% Similarity=0.388 Sum_probs=179.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc--CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCC-CCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 468999999999999864 57899999986542 2345678899998888 8999999999999999999999999999
Q ss_pred ChhccccCCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCC-
Q 006696 420 SLSTLLHGNR---GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP- 495 (635)
Q Consensus 420 ~L~~~l~~~~---~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~- 495 (635)
+|.+++.... ......+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 9999986421 112345899999999999999999999998 999999999999999999999999987654321
Q ss_pred --------CCCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 496 --------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 --------~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....+++.|+|||++.+ ..++.++||||||+++|||++|+.||......+. .......... ..
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~~~~~-~~- 247 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV------LMLTLQNDPP-SL- 247 (303)
T ss_dssp ------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH------HHHHHTSSCC-CT-
T ss_pred CccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH------HHHHhccCCC-cc-
Confidence 22357889999999876 5689999999999999999999999976432211 1111111100 00
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
................+.+++.+||+.||++|||+.|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00000000011122457788889999999999999999873
No 225
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.1e-37 Score=324.01 Aligned_cols=254 Identities=17% Similarity=0.275 Sum_probs=193.5
Q ss_pred hccccccCceEEEEEEecC-C-CeEEEEEeecccCCHHHHHHHHHHHHhhCCCCc------eeceeEEEEeCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLEE-S-TTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN------VVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~-~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~n------iv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||+||+|.... + ..||+|+++......+.+.+|+.++.++ +|++ ++.+++++...+..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKI-KEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHH-hhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 4679999999999999753 3 5799999976544456788899999888 5544 8999999999999999999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEE-------------------
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI------------------- 475 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll------------------- 475 (635)
|+ ++++.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+
T Consensus 103 ~~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 103 LL-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred cc-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccccc
Confidence 99 667777775432 235899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeccCCCCCCCCC-CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH
Q 006696 476 NQDLDGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ 554 (635)
Q Consensus 476 ~~~~~~ki~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 554 (635)
+.++.+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+. .....
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~ 252 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH---LVMME 252 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHH
Confidence 67889999999999765443 344688999999999999999999999999999999999999986542221 11111
Q ss_pred HHhhh---ccc-----ccc-------ch-----hh---------hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 006696 555 SVVRE---EWT-----AEV-------FD-----VE---------LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVV 605 (635)
Q Consensus 555 ~~~~~---~~~-----~~~-------~d-----~~---------~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl 605 (635)
..... .+. ... ++ .. .............+.+++.+||+.||++|||+.|++
T Consensus 253 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l 332 (355)
T 2eu9_A 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 332 (355)
T ss_dssp HHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 11100 000 000 00 00 000011123455788999999999999999999998
Q ss_pred HH
Q 006696 606 RM 607 (635)
Q Consensus 606 ~~ 607 (635)
++
T Consensus 333 ~h 334 (355)
T 2eu9_A 333 LH 334 (355)
T ss_dssp TS
T ss_pred cC
Confidence 63
No 226
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.4e-37 Score=322.06 Aligned_cols=245 Identities=22% Similarity=0.330 Sum_probs=189.6
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCC--HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||+|.. .+++.||||++...... ..++..|..++.+..+||||+++++++...+..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 46799999999999996 46888999999765433 344556666644444999999999999999999999999986
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC--
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
+|.+++..... ....+++..+..++.||+.||+|||+. + |+||||||+||+++.++.+||+|||++.......
T Consensus 135 ~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 210 (340)
T 3an0_A 135 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK 210 (340)
T ss_dssp EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHH
T ss_pred cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceeccccccc
Confidence 99888764221 134599999999999999999999987 7 9999999999999999999999999987654321
Q ss_pred -CCCCCCcccCccccc----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006696 497 -TPSRSAGYRAPEVIE----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 497 -~~~~t~~y~aPE~~~----~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
...+|+.|+|||++. ...++.++|||||||++|||++|+.||..... ............... .
T Consensus 211 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~-~------ 278 (340)
T 3an0_A 211 TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSPQ-L------ 278 (340)
T ss_dssp HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCCC-C------
T ss_pred ccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc-----hHHHHHHHhcCCCCC-C------
Confidence 245889999999974 34688999999999999999999999975321 111122222111110 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
........+.+++.+||+.||++|||+.|++++
T Consensus 279 ---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 279 ---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ---CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---CcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 001123467888899999999999999999984
No 227
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.7e-37 Score=327.25 Aligned_cols=247 Identities=22% Similarity=0.335 Sum_probs=188.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCce------EEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK------LLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~------~lv 412 (635)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|+.+++.+ +||||+++++++...+.. ++|
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCCcccceeEEEE
Confidence 467999999999999965 5788999999765433 35678899999999 899999999999877654 999
Q ss_pred eeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCC
Q 006696 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+. ++|.+++.. .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 126 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 126 MPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp EECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred Ecccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99997 588888742 3899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC-CCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh------ccccc
Q 006696 493 NVPA-TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE------EWTAE 564 (635)
Q Consensus 493 ~~~~-~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 564 (635)
.... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ ....+... .+...
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD------QLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHHHCCCCHHHHTT
T ss_pred ccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHHHhCCCcHHHHHH
Confidence 5433 3467899999999987 678999999999999999999999998643211 11111110 00000
Q ss_pred cchh-------hhhc--ccCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 565 VFDV-------ELMR--FQNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 565 ~~d~-------~~~~--~~~~----~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
..+. .... .... ......+.+++.+||+.||++|||++|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000 0000 0000 1123567888899999999999999999984
No 228
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.5e-37 Score=325.09 Aligned_cols=251 Identities=21% Similarity=0.313 Sum_probs=190.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeC-----CceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~e 414 (635)
.+.||+|+||.||+|... ++..||+|++..... ..+.+.+|++++.++ +||||+++++++... ...++|||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~iv~e 110 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQD 110 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCccccceEEEEEc
Confidence 468999999999999965 567899999975432 235688999999999 899999999999765 36799999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|+.+ +|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 111 ~~~~-~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 111 LMET-DLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp CCSE-EHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred ccCc-CHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 9974 999988632 3899999999999999999999998 99999999999999999999999999976542
Q ss_pred C-------CCCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc---c
Q 006696 495 P-------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT---A 563 (635)
Q Consensus 495 ~-------~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~ 563 (635)
. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.. ............ .
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL---NHILGILGSPSQEDLN 257 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHH---HHHHHHHCSCCHHHHH
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHH---HHHHHHhCCCCHHHHH
Confidence 2 23467899999998754 45899999999999999999999999865433221 111111100000 0
Q ss_pred ccchh-------hhh--cccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 564 EVFDV-------ELM--RFQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 564 ~~~d~-------~~~--~~~~----~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
...+. ... .... .......+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 000 0000 01123457788899999999999999999984
No 229
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.4e-37 Score=318.86 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=192.7
Q ss_pred hccccccCceEEEEEEe--cCCCeEEEEEeecccC---CHHHHHHHHHHHHhhC--CCCceeceeEEEE-----eCCceE
Q 006696 343 AEVLGKGSYGTAYKAVL--EESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVG--QHPNVVPLRAYYY-----SKDEKL 410 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~--~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~--~h~niv~l~~~~~-----~~~~~~ 410 (635)
.+.||+|+||.||+|.. .+++.||+|++..... ....+.+|+.+++.+. +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 46899999999999997 3577899999875432 2345778888877664 7999999999987 456788
Q ss_pred EEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCC
Q 006696 411 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 411 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~ 490 (635)
+||||+. |+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 96 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEECCS-CBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred EEEecCC-CCHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 9999998 69999987543 234899999999999999999999998 9999999999999999999999999997
Q ss_pred CCCCC---CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh-------hc
Q 006696 491 LMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR-------EE 560 (635)
Q Consensus 491 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------~~ 560 (635)
..... ....+++.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+.. ..
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD------QLGKILDVIGLPGEED 242 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHHHCCCCGGG
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHHHcCCCCccc
Confidence 65432 23457889999999999999999999999999999999999998653211 1111111 11
Q ss_pred cccccchh--hhh------cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 561 WTAEVFDV--ELM------RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 561 ~~~~~~d~--~~~------~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
|......+ ... ...........+.+++.+||+.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11100000 000 000011223456788889999999999999999963
No 230
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.5e-37 Score=326.24 Aligned_cols=259 Identities=23% Similarity=0.328 Sum_probs=189.6
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeC---------------
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--------------- 406 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--------------- 406 (635)
.+.||+|+||.||+|.. .+++.||+|++.... ....+|+++++.+ +||||+++++++...
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVL-DHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTC-CCTTBCCEEEEEEEC---------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHc-CCCCccchhheeeecCcccccccccccccc
Confidence 46899999999999986 468899999986542 2334789999999 999999999998543
Q ss_pred -----------------------CceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 006696 407 -----------------------DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKF 463 (635)
Q Consensus 407 -----------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 463 (635)
...++||||+++ +|.+.+..... ....+++..+..++.||+.||+|||+.+ |
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g---i 162 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIHSLG---I 162 (383)
T ss_dssp ----------------------CCEEEEEECCCSE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---E
T ss_pred cccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCc---C
Confidence 237899999984 87777753221 1345999999999999999999999998 9
Q ss_pred eecCCCCCCEEEc-CCCCeEEeccCCCCCCCCC---CCCCCCCcccCcccccCC-CCCCccchHhHHHHHHHHHhCCCCC
Q 006696 464 THGNIKASNVLIN-QDLDGCISDFGLTPLMNVP---ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPL 538 (635)
Q Consensus 464 vHrDlk~~NIll~-~~~~~ki~DfGla~~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gv~l~elltg~~p~ 538 (635)
+||||||+||+++ .++.+||+|||+++..... ....+|+.|+|||++.+. .++.++||||+||++|||++|+.||
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 242 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCC
Confidence 9999999999998 6899999999999765433 234578889999998765 4899999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHHhh----------hccccccc----hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 006696 539 QSPTRDDMVDLPRWVQSVVR----------EEWTAEVF----DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604 (635)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~----d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev 604 (635)
.+....+. +...+..... ..+....+ ...+. ..........+.+++.+||+.||++|||+.|+
T Consensus 243 ~~~~~~~~--~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 319 (383)
T 3eb0_A 243 SGETSIDQ--LVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWR-KILPEGTPSLAIDLLEQILRYEPDLRINPYEA 319 (383)
T ss_dssp CCSSHHHH--HHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHH-HHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred CCCChHHH--HHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHH-hhCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 86542211 1111110000 00000000 00000 00011123457888899999999999999999
Q ss_pred HH--HHHHHhh
Q 006696 605 VR--MIEEVRQ 613 (635)
Q Consensus 605 l~--~L~~~~~ 613 (635)
++ .++++..
T Consensus 320 l~hp~f~~~~~ 330 (383)
T 3eb0_A 320 MAHPFFDHLRN 330 (383)
T ss_dssp HTSGGGHHHHH
T ss_pred hcCHHHHHHHh
Confidence 97 4566554
No 231
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.5e-37 Score=329.94 Aligned_cols=259 Identities=24% Similarity=0.334 Sum_probs=187.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCC------ceEEEeee
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------EKLLVYDY 415 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lv~e~ 415 (635)
.+.||+|+||.||+|... +++.||||++.... ....+|+++++++ +||||+++++++.... ..++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTC-CCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHc-CCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 468999999999999985 48899999986542 3345799999999 9999999999986432 25689999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCC-CCeEEeccCCCCCCCC
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-LDGCISDFGLTPLMNV 494 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~-~~~ki~DfGla~~~~~ 494 (635)
+++ ++.+.+..... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+++....
T Consensus 135 ~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 135 VPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 986 66665543211 2345999999999999999999999998 9999999999999965 5689999999976543
Q ss_pred C---CCCCCCCcccCcccccCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh---hcc---ccc
Q 006696 495 P---ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR---EEW---TAE 564 (635)
Q Consensus 495 ~---~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~---~~~ 564 (635)
. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+ .+...+..... +.+ ...
T Consensus 210 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~--~l~~i~~~lg~p~~~~~~~~~~~ 287 (420)
T 1j1b_A 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIREMNPN 287 (420)
T ss_dssp TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHHHHCSC
T ss_pred CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHhhChh
Confidence 2 234578999999999765 78999999999999999999999998653211 11111111000 000 000
Q ss_pred cchhhhhcc--c-----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHHh
Q 006696 565 VFDVELMRF--Q-----NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVR 612 (635)
Q Consensus 565 ~~d~~~~~~--~-----~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~--L~~~~ 612 (635)
..+..+... . ........+.+|+.+||+.||++|||+.|++++ ++.+.
T Consensus 288 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp CCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 000000000 0 001123467888899999999999999999974 44443
No 232
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.1e-36 Score=319.63 Aligned_cols=263 Identities=21% Similarity=0.298 Sum_probs=183.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCc-------eEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-------KLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-------~~lv~e 414 (635)
.+.||+|+||.||+|... +++.||||++...........++++.+..+ +||||+++++++..... .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhc-CCCCcccHHHhhhccccccccceeEEEEee
Confidence 467999999999999975 578999999876655556677788888888 99999999999976543 789999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCceecCCCCCCEEEcC-CCCeEEeccCCCCC
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--SMGGPKFTHGNIKASNVLINQ-DLDGCISDFGLTPL 491 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivHrDlk~~NIll~~-~~~~ki~DfGla~~ 491 (635)
|+++ +|.+.+..... ....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+|||++..
T Consensus 107 ~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~ 181 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181 (360)
T ss_dssp CCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEECCCTTCBC
T ss_pred cccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEEeeCCCcee
Confidence 9986 55444332111 2345889999999999999999999 887 999999999999997 89999999999987
Q ss_pred CCCCC---CCCCCCcccCcccccCCC-CCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHH-----------
Q 006696 492 MNVPA---TPSRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSV----------- 556 (635)
Q Consensus 492 ~~~~~---~~~~t~~y~aPE~~~~~~-~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~----------- 556 (635)
..... ...+|+.|+|||++.+.. ++.++|||||||++|||++|+.||......+. +.......
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3e3p_A 182 LSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ--LHEIVRVLGCPSREVLRKL 259 (360)
T ss_dssp CCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHH
T ss_pred cCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH--HHHHHHHcCCCCHHHHHhc
Confidence 65433 345788999999986654 89999999999999999999999986542211 11111100
Q ss_pred hhhccccccchhh---h--hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHHhh
Q 006696 557 VREEWTAEVFDVE---L--MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVRQ 613 (635)
Q Consensus 557 ~~~~~~~~~~d~~---~--~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~--L~~~~~ 613 (635)
..........+.. + ............+.+++.+||+.||++|||+.|++++ ++++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 0000000000000 0 0000001134568889999999999999999999984 555443
No 233
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.8e-37 Score=320.95 Aligned_cols=247 Identities=23% Similarity=0.325 Sum_probs=188.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEeCCc------eEEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE------KLLV 412 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~------~~lv 412 (635)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|+.++.++ +||||+++++++..... .++|
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv 107 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLV 107 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCcccHhheEecccccccceeEEEE
Confidence 467999999999999975 5788999999765433 35678899999999 89999999999987654 4999
Q ss_pred eeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCC
Q 006696 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+. |+|.+++.. .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 108 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 108 MPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp EECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred ecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 99997 588888742 3899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC-CCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh------ccccc
Q 006696 493 NVPA-TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE------EWTAE 564 (635)
Q Consensus 493 ~~~~-~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 564 (635)
.... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+ ....+... .+...
T Consensus 177 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD------QLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH------HHHHHHHHHCBCCHHHHTT
T ss_pred CCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHhCCCCHHHHHH
Confidence 4432 3457889999999877 678999999999999999999999998654211 11111100 00000
Q ss_pred cchhh-------hh-----c-ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 565 VFDVE-------LM-----R-FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 565 ~~d~~-------~~-----~-~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
..+.. +. . ..........+.+++.+||+.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 00 0 00011234567788889999999999999999974
No 234
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.4e-36 Score=310.83 Aligned_cols=241 Identities=20% Similarity=0.312 Sum_probs=189.1
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---HHHHHHHHHHHHhhCC-CCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQ-HPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||++...+++.||+|++...... .+.+.+|++++.++.+ |+||+++++++..++..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 4689999999999999888999999999765433 3567889999999954 7999999999999999999999 667
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC--
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ ++.+||+|||++.......
T Consensus 112 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 112 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp EEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCC-------
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEE-CCeEEEeeccccccccCcccc
Confidence 8999999743 34899999999999999999999998 99999999999996 4899999999998764322
Q ss_pred ----CCCCCCcccCcccccC-----------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006696 497 ----TPSRSAGYRAPEVIET-----------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 497 ----~~~~t~~y~aPE~~~~-----------~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
...+++.|+|||++.+ ..++.++||||||+++|||++|+.||..... .............
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~ 257 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPNH 257 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHCTTS
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHHHHHhccc
Confidence 2357889999999875 4688899999999999999999999974321 1111222221111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006696 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 608 (635)
.... . ......+.+++.+||+.||++|||+.|++++-
T Consensus 258 ~~~~-------~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 258 EIEF-------P---DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CCCC-------C---CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccCC-------c---ccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 1000 0 11124577888899999999999999999864
No 235
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.7e-36 Score=309.75 Aligned_cols=241 Identities=21% Similarity=0.357 Sum_probs=184.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEe-------------CCc
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS-------------KDE 408 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-------------~~~ 408 (635)
.+.||+|+||.||+|... +++.||+|++.......+.+.+|+.++.++ +||||+++++++.+ .+.
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 468999999999999964 688999999976544456788999999999 89999999999865 346
Q ss_pred eEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCC
Q 006696 409 KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 488 (635)
Q Consensus 409 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGl 488 (635)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSE----NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHS----CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEecCCCCCHHHhhhcc----ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeCcc
Confidence 78999999999999999743 234788999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCC------------------CCCCCCCcccCcccccCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 006696 489 TPLMNVP------------------ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549 (635)
Q Consensus 489 a~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~ 549 (635)
+...... ....+++.|+|||++.+. .++.++|||||||++|||++ ||.... +.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-----~~ 234 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-----ER 234 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HH
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-----hH
Confidence 8765421 123467889999999764 68999999999999999998 553210 00
Q ss_pred hHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 550 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 550 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
............ .+... ........+.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 VNILKKLRSVSI---EFPPD-----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHSTTC---CCCTT-----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHhcccccc---ccCcc-----ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111111111000 00000 111223456788889999999999999999874
No 236
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=308.10 Aligned_cols=239 Identities=21% Similarity=0.343 Sum_probs=188.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc-----CCHHHHHHHHHHHHhhCCCCceeceeEEEE--eCCceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV-----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYY--SKDEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~--~~~~~~lv~e 414 (635)
.+.||+|+||.||++... +++.||+|++.... .....+.+|++++.++ +||||+++++++. .....++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e 88 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQKMYMVME 88 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---CEEEEEE
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCCeEEEEeh
Confidence 467999999999999975 57889999997542 2346788999999999 8999999999985 3457899999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|++++ |.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 89 ~~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 89 YCVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp CCSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred hccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 99886 767665432 235899999999999999999999998 99999999999999999999999999876532
Q ss_pred C------CCCCCCCcccCcccccCCC--CCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 495 P------ATPSRSAGYRAPEVIETRK--HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 495 ~------~~~~~t~~y~aPE~~~~~~--~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
. ....+++.|+|||++.+.. ++.++||||||+++|||++|+.||.... .......+......
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~~~~~~---- 231 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------IYKLFENIGKGSYA---- 231 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHCCCC----
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHhcCCCC----
Confidence 1 2345788999999997654 3779999999999999999999997543 11222222111110
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
........+.+++.+||+.||++|||++|++++
T Consensus 232 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 --------IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --------CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --------CCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 001223456788889999999999999999986
No 237
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5.7e-37 Score=317.48 Aligned_cols=249 Identities=22% Similarity=0.338 Sum_probs=171.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC--HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||+|... +++.||||++...... ...+..|+..+.+..+||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 467999999999999975 5788999999765322 334556666444444999999999999999999999999986
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC--
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
+|.+++..........+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||++.......
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 182 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceeccccccc
Confidence 887777532211234589999999999999999999998 8 9999999999999999999999999997764332
Q ss_pred -CCCCCCcccCcccc----cCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006696 497 -TPSRSAGYRAPEVI----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 497 -~~~~t~~y~aPE~~----~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
...+++.|+|||++ .+..++.++||||||+++|||++|+.||........ ......... . +.+
T Consensus 183 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~~-~-----~~~- 250 (327)
T 3aln_A 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----QLTQVVKGD-P-----PQL- 250 (327)
T ss_dssp -----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCCSC-C-----CCC-
T ss_pred ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----HHHHHhcCC-C-----CCC-
Confidence 23578889999999 456789999999999999999999999975432100 000000000 0 000
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
...........+.+++.+||+.||++|||+.|++++
T Consensus 251 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 000001123467788889999999999999999884
No 238
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.6e-36 Score=317.46 Aligned_cols=251 Identities=20% Similarity=0.276 Sum_probs=188.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeC-----CceEEEee
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVYD 414 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~e 414 (635)
.+.||+|+||.||+|... +++.||||++..... ....+.+|++++.++ +||||+++++++... ...++|||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~e 94 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFENFNEVYIIQE 94 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCSTTCCCEEEEEC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccCccceEEEEEe
Confidence 467999999999999976 578899999964332 235677899999999 899999999998764 57899999
Q ss_pred eccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCC
Q 006696 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|+. |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 95 LMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp CCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 997 599998864 24899999999999999999999998 99999999999999999999999999976542
Q ss_pred C--------------CCCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh
Q 006696 495 P--------------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE 559 (635)
Q Consensus 495 ~--------------~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 559 (635)
. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. ..........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~ 241 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ---LLLIFGIIGT 241 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHHHhCC
Confidence 1 12346888999998754 6789999999999999999999999986532110 0001110000
Q ss_pred cc----ccccchh-------hhhcc--cC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 560 EW----TAEVFDV-------ELMRF--QN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 560 ~~----~~~~~d~-------~~~~~--~~----~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.. ....... .+... .. .......+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 0000000 00000 00 01223457788899999999999999999984
No 239
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.1e-36 Score=305.04 Aligned_cols=241 Identities=21% Similarity=0.332 Sum_probs=193.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|... +++.||+|++..... ....+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCeEEEEEEccCC
Confidence 578999999999999975 588899999976532 456788999999999 999999999999999999999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCC---CCeEEeccCCCCCCCCC
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~---~~~ki~DfGla~~~~~~ 495 (635)
++|.+++... ..+++..+..++.||+.||+|||+.+ ++||||||+||+++.+ +.+||+|||++......
T Consensus 106 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 106 GELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 9999888642 24899999999999999999999998 9999999999999764 47999999998766543
Q ss_pred CCC---CCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006696 496 ATP---SRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ~~~---~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
... .+++.|+|||.+.+ .++.++||||||+++|+|++|..||...... .............. ...
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~-----~~~ 245 (287)
T 2wei_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY------DILKRVETGKYAFD-----LPQ 245 (287)
T ss_dssp SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCCC-----SGG
T ss_pred CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCCCCC-----chh
Confidence 322 25677999999876 4899999999999999999999999754321 11222221111100 000
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
. ......+.+++.+||+.||++|||+.|++++
T Consensus 246 ~---~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 246 W---RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp G---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred h---hhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 1 1223457788889999999999999999984
No 240
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=326.52 Aligned_cols=239 Identities=21% Similarity=0.350 Sum_probs=180.8
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.++||+|+||+||.....+++.||||++.... ...+.+|+++++.+.+||||+++++++.+.+..++||||+. |+|.
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~ 105 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQ 105 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHH
Confidence 46799999999766556678999999986532 23467899999998789999999999999999999999996 5999
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC-----CCCeEEeccCCCCCCCCC--
Q 006696 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-----DLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~-----~~~~ki~DfGla~~~~~~-- 495 (635)
+++..... ...+..+..++.||+.||+|||+.+ |+||||||+|||++. ...+||+|||+++.....
T Consensus 106 ~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 106 EYVEQKDF----AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp HHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred HHHHhcCC----CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 99975432 2444456789999999999999998 999999999999953 346889999999766432
Q ss_pred -----CCCCCCCcccCccccc---CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 496 -----ATPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 -----~~~~~t~~y~aPE~~~---~~~~~~~~DvwS~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....||+.|+|||++. ...++.++|||||||++|||++ |..||...... ...... ........
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-------~~~~~~-~~~~~~~~ 250 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-------QANILL-GACSLDCL 250 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-------HHHHHT-TCCCCTTS
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-------HHHHHh-ccCCcccc
Confidence 2345899999999997 4567889999999999999999 99999643211 111111 11110000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 606 (635)
.........+.+++.+||+.||++|||++|+++
T Consensus 251 -------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 251 -------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 011123345678889999999999999999995
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.7e-37 Score=317.94 Aligned_cols=233 Identities=21% Similarity=0.382 Sum_probs=190.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC-------HHHHHHHHHHHHhhC-CCCceeceeEEEEeCCceEEEe
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG-------KRDFEQQMEIVGRVG-QHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~e~~~l~~l~-~h~niv~l~~~~~~~~~~~lv~ 413 (635)
.+.||+|+||.||+|... +++.||||++...... ...+.+|+.++.++. .|+||+++++++...+..++||
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 468999999999999864 5788999999765322 245778999999995 3799999999999999999999
Q ss_pred eeccC-CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEc-CCCCeEEeccCCCCC
Q 006696 414 DYFAS-GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLTPL 491 (635)
Q Consensus 414 e~~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~-~~~~~ki~DfGla~~ 491 (635)
||+.+ ++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++ +++.+||+|||++..
T Consensus 128 e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 128 ERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp ECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 99986 8999998642 34899999999999999999999998 99999999999999 789999999999876
Q ss_pred CCCCC--CCCCCCcccCcccccCCCC-CCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006696 492 MNVPA--TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 492 ~~~~~--~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
..... ...+|+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ....... .+
T Consensus 200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~~~~~---~~-- 262 (320)
T 3a99_A 200 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EIIRGQV---FF-- 262 (320)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHCCC---CC--
T ss_pred cccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------hhhcccc---cc--
Confidence 65432 3457889999999987765 678999999999999999999996421 0011100 00
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.. .....+.+++.+||+.||++|||++|++++
T Consensus 263 ----~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 263 ----RQ---RVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ----SS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----cc---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01 112356788889999999999999999874
No 242
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.5e-37 Score=315.54 Aligned_cols=248 Identities=21% Similarity=0.301 Sum_probs=182.4
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCCceeceeEEEE--------------eC
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYY--------------SK 406 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~--------------~~ 406 (635)
.+.||+|+||.||+|.... ++.||+|++..... ..+.+.+|+++++++ +||||+++++++. ..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhc-CCCCeeEEEEecccccccccccccccccc
Confidence 4679999999999999765 78899999875432 245688999999999 9999999999873 34
Q ss_pred CceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEc-CCCCeEEec
Q 006696 407 DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISD 485 (635)
Q Consensus 407 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~-~~~~~ki~D 485 (635)
...++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.+||+|
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEECC
T ss_pred CceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEcc
Confidence 57799999998 599999863 24899999999999999999999998 99999999999997 567999999
Q ss_pred cCCCCCCCCCC-------CCCCCCcccCcccccC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHh
Q 006696 486 FGLTPLMNVPA-------TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV 557 (635)
Q Consensus 486 fGla~~~~~~~-------~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 557 (635)
||++....... ...++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+ ....+.
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~------~~~~~~ 238 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE------QMQLIL 238 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHH
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHH
Confidence 99998754321 1235778999998865 678999999999999999999999998654211 111111
Q ss_pred hhcccc-------------ccchhhhhcc-cC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 558 REEWTA-------------EVFDVELMRF-QN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 558 ~~~~~~-------------~~~d~~~~~~-~~----~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
...... .......... .. .......+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 110000 0000000000 00 01123567888899999999999999999884
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=313.53 Aligned_cols=242 Identities=17% Similarity=0.291 Sum_probs=170.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCH--HHHHHHH-HHHHhhCCCCceeceeEEEEeCCceEEEeeeccC
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGK--RDFEQQM-EIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~e~-~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|... +++.||||++....... .....|. .++..+ +||||+++++++...+..++||||+ +
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~-~ 107 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH-DCPYIVQCFGTFITNTDVFIAMELM-G 107 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEEECCC-S
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCceeeEEEEEecCCcEEEEEecc-C
Confidence 568999999999999975 58899999997654322 2333344 345555 9999999999999999999999999 4
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCC-
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+.+..+.... ...+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||++.......
T Consensus 108 ~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 108 TCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 4555544321 23489999999999999999999995 7 9999999999999999999999999987654322
Q ss_pred --CCCCCCcccCccccc-----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 006696 497 --TPSRSAGYRAPEVIE-----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 569 (635)
Q Consensus 497 --~~~~t~~y~aPE~~~-----~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 569 (635)
...+++.|+|||++. ...++.++||||||+++|||++|+.||..... ...............
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~------ 249 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-----DFEVLTKVLQEEPPL------ 249 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHHSCCCC------
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-----cHHHHHHHhccCCCC------
Confidence 335788999999994 45688999999999999999999999975321 112222222221110
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 570 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.+........+.+++.+||+.||.+|||++|++++
T Consensus 250 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 250 ---LPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ---CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ---CCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00001122456788889999999999999999983
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=311.81 Aligned_cols=233 Identities=23% Similarity=0.386 Sum_probs=184.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-------CHHHHHHHHHHHHhhC---CCCceeceeEEEEeCCceEE
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVG---QHPNVVPLRAYYYSKDEKLL 411 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~---~h~niv~l~~~~~~~~~~~l 411 (635)
.+.||+|+||.||+|... +++.||+|++..... ....+.+|+.++.++. +|+||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 578999999999999864 578899999975532 1234567888888875 79999999999999999999
Q ss_pred Eeee-ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEc-CCCCeEEeccCCC
Q 006696 412 VYDY-FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLT 489 (635)
Q Consensus 412 v~e~-~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~-~~~~~ki~DfGla 489 (635)
|||| +.+++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++ .++.+||+|||++
T Consensus 116 v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp EEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred EEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 9999 7899999999742 24899999999999999999999998 99999999999999 8899999999998
Q ss_pred CCCCCC--CCCCCCCcccCcccccCCCCC-CccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006696 490 PLMNVP--ATPSRSAGYRAPEVIETRKHS-HKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 490 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~-~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
...... ....++..|+|||++.+..+. .++||||||+++|||++|+.||.... .......
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~~~----- 250 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------EILEAEL----- 250 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHTCC-----
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------HHhhhcc-----
Confidence 765443 234578899999999877664 58999999999999999999996321 0111100
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006696 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 607 (635)
.........+.+++.+||+.||++|||++|++++
T Consensus 251 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 251 -------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0001123456788889999999999999999974
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.2e-35 Score=301.19 Aligned_cols=229 Identities=12% Similarity=0.118 Sum_probs=178.6
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCCH----HHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeecc
Q 006696 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGK----RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~----~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|.... ++.||+|++....... +.+.+|+.++.++ +||||+++++++..++..|+||||++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 114 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGGLVVAEWIR 114 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcEEEEEEecC
Confidence 4679999999999999764 7889999998664432 6788899999998 99999999999999999999999999
Q ss_pred CCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCCC
Q 006696 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 497 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~~ 497 (635)
+++|.+++... ....++.+++.|++.||+|||+.+ |+||||||+|||++.++.+||+++|
T Consensus 115 g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 115 GGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp EEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred CCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc----------
Confidence 99999998531 355678899999999999999998 9999999999999999999998553
Q ss_pred CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChH
Q 006696 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 577 (635)
Q Consensus 498 ~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 577 (635)
|++ .++.++|||||||++|||+||+.||.+.+..+..... ............ ....
T Consensus 175 ------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~--- 230 (286)
T 3uqc_A 175 ------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-------ERDTAGQPIEPA-DIDR--- 230 (286)
T ss_dssp ------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-------CBCTTSCBCCHH-HHCT---
T ss_pred ------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-------HHHhccCCCChh-hccc---
Confidence 333 3688999999999999999999999876543321000 000000000000 0001
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHhhcCCC
Q 006696 578 EEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 578 ~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.....+.+++.+||+.||++| |+.|+++.|+++......
T Consensus 231 ~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~ 269 (286)
T 3uqc_A 231 DIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADR 269 (286)
T ss_dssp TSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCc
Confidence 122457788889999999999 999999999999876554
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-35 Score=336.57 Aligned_cols=233 Identities=18% Similarity=0.266 Sum_probs=188.7
Q ss_pred hccccccCceEEEEEEec--CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCc-----eEEEe
Q 006696 343 AEVLGKGSYGTAYKAVLE--ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-----KLLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-----~~lv~ 413 (635)
.+.||+|+||+||+|.+. +++.||||++..... ....+.+|++++.++ +||||+++++++...+. .|+||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~~lv~ 163 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDRHGDPVGYIVM 163 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecCCCCCceeEEEE
Confidence 467999999999999975 578899999865432 234678899999999 89999999999988766 69999
Q ss_pred eeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCC
Q 006696 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++++|.+++.. .+++..+..++.||+.||.|||+++ |+||||||+|||++.+ .+||+|||+++...
T Consensus 164 E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 164 EYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp ECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 99999999987752 4999999999999999999999998 9999999999999986 89999999998877
Q ss_pred CCCCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006696 494 VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 494 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
......||++|+|||++.+. ++.++|||||||++|||++|..||.......... .
T Consensus 233 ~~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~------------------------~ 287 (681)
T 2pzi_A 233 SFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPE------------------------D 287 (681)
T ss_dssp CCSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCT------------------------T
T ss_pred cCCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccccc------------------------c
Confidence 66667799999999999765 4889999999999999999999987532221100 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHHHHHh
Q 006696 574 QNIEEEMVQMLQIGMACVAKVPDMRPN-MDEVVRMIEEVR 612 (635)
Q Consensus 574 ~~~~~~~~~l~~li~~Cl~~dP~~RPs-~~evl~~L~~~~ 612 (635)
.........+.+++.+||+.||++||+ ++++.+.|..+.
T Consensus 288 ~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 288 DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 001122346778899999999999995 666666666554
No 247
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.2e-35 Score=301.60 Aligned_cols=225 Identities=18% Similarity=0.285 Sum_probs=175.7
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEe----CCceEEEeeeccC
Q 006696 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYFAS 418 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~~~~ 418 (635)
+.||+|+||.||++... +++.||+|+++. ...+.+|++++.++.+||||+++++++.. ....++||||+++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~ 99 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 99 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence 67999999999999974 578999999864 35678899988777799999999999987 6678999999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcC---CCCeEEeccCCCCCCCCC
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~---~~~~ki~DfGla~~~~~~ 495 (635)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++....
T Consensus 100 ~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-- 171 (299)
T 3m2w_A 100 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-- 171 (299)
T ss_dssp CBHHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT--
T ss_pred CcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccccccc--
Confidence 99999997543 235999999999999999999999998 999999999999998 7899999999986432
Q ss_pred CCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc-
Q 006696 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ- 574 (635)
Q Consensus 496 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~- 574 (635)
+..++.++|||||||++|||++|+.||......+... .....+..... ..+
T Consensus 172 ----------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-----------~~~~~~~~~~~-~~~~ 223 (299)
T 3m2w_A 172 ----------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-----------GMKTRIRMGQY-EFPN 223 (299)
T ss_dssp ----------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-----------CSCCSSCTTCC-SSCH
T ss_pred ----------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-----------HHHHHHhhccc-cCCc
Confidence 2457789999999999999999999997654322110 00000000000 000
Q ss_pred -ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006696 575 -NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 575 -~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 608 (635)
........+.+++.+||+.||++|||+.|++++-
T Consensus 224 ~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 224 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hhcccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 0012234677888899999999999999999853
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=8.9e-36 Score=329.99 Aligned_cols=263 Identities=19% Similarity=0.285 Sum_probs=197.6
Q ss_pred hhccccccCceEEEEEEec-CCCeEEEEEeecccC--CHHHHHHHHHHHHhhCCCCceeceeEEEEe------CCceEEE
Q 006696 342 SAEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS------KDEKLLV 412 (635)
Q Consensus 342 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~------~~~~~lv 412 (635)
..+.||+|+||.||+|... +++.||||++..... ..+.+.+|++++.++ +||||+++++++.. .+..++|
T Consensus 18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~~~~~LV 96 (676)
T 3qa8_A 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPNDLPLLA 96 (676)
T ss_dssp CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTTSSCCCE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCCCeEEEE
Confidence 3578999999999999974 578899999875432 245688899999999 99999999998755 5677999
Q ss_pred eeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCC---eEEeccCCC
Q 006696 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLT 489 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~---~ki~DfGla 489 (635)
|||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++
T Consensus 97 mEy~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 97 MEYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp EECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EEeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 999999999999975432 234888999999999999999999998 999999999999997765 899999999
Q ss_pred CCCCCCC---CCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh--------
Q 006696 490 PLMNVPA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR-------- 558 (635)
Q Consensus 490 ~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------- 558 (635)
....... ...+++.|+|||++.+..++.++|||||||++|||++|..||...... ..|......
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC------CCS
T ss_pred cccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccchhhhh
Confidence 8765432 345788999999999999999999999999999999999999753110 000000000
Q ss_pred -hccccc-cchhhhhc-ccChHHHHHHHHHHHHHcccCCCCCCCCHHH-----HHHHHHHHhhcC
Q 006696 559 -EEWTAE-VFDVELMR-FQNIEEEMVQMLQIGMACVAKVPDMRPNMDE-----VVRMIEEVRQSD 615 (635)
Q Consensus 559 -~~~~~~-~~d~~~~~-~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~e-----vl~~L~~~~~~~ 615 (635)
+..... .+...... ..........+.+++.+||+.||++|||+.| +.+.++.+....
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 000000 00000000 0111234567788899999999999999998 567777777654
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4e-35 Score=313.34 Aligned_cols=236 Identities=13% Similarity=0.129 Sum_probs=172.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC----CHHHHHHHHHHHHhhCCC-Cceec------------------
Q 006696 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQH-PNVVP------------------ 398 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h-~niv~------------------ 398 (635)
.++||+|+||+||+|.+. +++.||||++..... ..+.+.+|+.++..+ +| +|...
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-RGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGS-TTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhh-ccCCCHHHHHHhcccccchhhcccCC
Confidence 467999999999999954 688999999874322 246788999988888 44 32111
Q ss_pred ---eeEEEEe-----CCceEEEeeeccCCChhccccCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCC
Q 006696 399 ---LRAYYYS-----KDEKLLVYDYFASGSLSTLLHGNR--GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNI 468 (635)
Q Consensus 399 ---l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDl 468 (635)
++.++.. ....+++|+++ +++|.+++.... ......+++..+..++.||+.||+|||+++ |+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCc
Confidence 1111111 12345666654 679998884211 012335888899999999999999999998 999999
Q ss_pred CCCCEEEcCCCCeEEeccCCCCCCCCCC-CCCCCCcccCcccc----------cCCCCCCccchHhHHHHHHHHHhCCCC
Q 006696 469 KASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAGYRAPEVI----------ETRKHSHKSDVYSFGVLLLEMLTGKAP 537 (635)
Q Consensus 469 k~~NIll~~~~~~ki~DfGla~~~~~~~-~~~~t~~y~aPE~~----------~~~~~~~~~DvwS~Gv~l~elltg~~p 537 (635)
||+|||++.++.+||+|||+++...... ...| +.|+|||++ ....++.++|||||||++|||++|+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999987654432 3456 899999999 556688999999999999999999999
Q ss_pred CCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006696 538 LQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 606 (635)
|......+... ..+...... ...+.+++.+||+.||++||++.|+++
T Consensus 317 f~~~~~~~~~~-------------------~~~~~~~~~---~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAALGGSE-------------------WIFRSCKNI---PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGGSCSG-------------------GGGSSCCCC---CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchhhhHH-------------------HHHhhcccC---CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 98654332211 111111111 245778888999999999999777654
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=6.4e-35 Score=303.26 Aligned_cols=240 Identities=13% Similarity=0.167 Sum_probs=182.0
Q ss_pred HhhccccccCceEEEEEEecCCCeEEEEEeecccC---------CHHHHHHHHHHHHhhC--------CCCceeceeEEE
Q 006696 341 ASAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVG--------QHPNVVPLRAYY 403 (635)
Q Consensus 341 ~~~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~--------~h~niv~l~~~~ 403 (635)
...+.||+|+||+||+|+. +++.||||++..... ..+.+.+|+.+++++. .||||+++.+.+
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 4578999999999999998 579999999976532 2367889999999885 488888877765
Q ss_pred E------------------------------eCCceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 006696 404 Y------------------------------SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453 (635)
Q Consensus 404 ~------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~ 453 (635)
. ..+..++||||+++|++.+.+.+ ..+++..+..++.||+.||+
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHHH
Confidence 3 26788999999999987777642 24899999999999999999
Q ss_pred HHH-hcCCCCceecCCCCCCEEEcCCC--------------------CeEEeccCCCCCCCCCCCCCCCCcccCcccccC
Q 006696 454 HIH-SMGGPKFTHGNIKASNVLINQDL--------------------DGCISDFGLTPLMNVPATPSRSAGYRAPEVIET 512 (635)
Q Consensus 454 ~LH-~~~~~~ivHrDlk~~NIll~~~~--------------------~~ki~DfGla~~~~~~~~~~~t~~y~aPE~~~~ 512 (635)
||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|||++.+
T Consensus 176 ~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 176 VAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCC
T ss_pred HHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcC
Confidence 999 888 99999999999999887 8999999999876533 3468999999999987
Q ss_pred CCCCCccchHhHHHH-HHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcc
Q 006696 513 RKHSHKSDVYSFGVL-LLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACV 591 (635)
Q Consensus 513 ~~~~~~~DvwS~Gv~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl 591 (635)
.. +.++||||+|++ .+++++|..||.. ..|.......-........ .............+.+++.+||
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLTDKMLKQMTFKT-KCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHHHHHHHTCCCSS-CCCSHHHHHHHHHHHHHHHHGG
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHHHhhhhhhccCc-ccchhhhhhcCHHHHHHHHHHh
Confidence 66 889999998777 7889999999852 1121111110000000000 0001112345667889999999
Q ss_pred cCCCCCCCCHHHHH-HH
Q 006696 592 AKVPDMRPNMDEVV-RM 607 (635)
Q Consensus 592 ~~dP~~RPs~~evl-~~ 607 (635)
+.| |++|++ ++
T Consensus 321 ~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 321 NFS-----SATDLLCQH 332 (336)
T ss_dssp GSS-----SHHHHHHHC
T ss_pred ccC-----CHHHHHhcC
Confidence 976 999988 53
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=2.5e-29 Score=277.94 Aligned_cols=181 Identities=17% Similarity=0.105 Sum_probs=127.5
Q ss_pred cccccCceEEEEEE-ecCCCeEEEEEeecccC-----------CHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEE
Q 006696 345 VLGKGSYGTAYKAV-LEESTTVVVKRLKEVVV-----------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 345 ~iG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~-----------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
..+.|++|.+..++ .--|..+++|++..... ..+++.+|+++|+++..|+||++++++++++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35667777666554 23478899999975421 1346899999999998999999999999999999999
Q ss_pred eeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCC
Q 006696 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||++|++|.++|... .+++.. +|+.||+.||+|+|++| ||||||||+|||+++++.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999743 346654 58899999999999999 999999999999999999999999999876
Q ss_pred CCCCC----CCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCC
Q 006696 493 NVPAT----PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537 (635)
Q Consensus 493 ~~~~~----~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p 537 (635)
....+ ..||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 390 ~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 54432 247889999999976 467789999999998887665444
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=1.3e-27 Score=245.41 Aligned_cols=189 Identities=36% Similarity=0.672 Sum_probs=169.4
Q ss_pred CCChhHHHHHHHHHHhCCCCC-CCCCCCCCCCCCC--ceeeEecCCC--CeEEEEEeCCCCccC--cCCcccccCCCCCc
Q 006696 25 ADLNSDRQALLDFADAVPHLR-KLNWSSTNPICQS--WVGINCTQDR--TRVFGLRLPGIGLVG--PIPNNTLGKLDALE 97 (635)
Q Consensus 25 ~~~~~~~~al~~~~~~~~~~~-~~~w~~~~~~c~~--w~gv~c~~~~--~~v~~l~l~~~~l~g--~lp~~~~~~l~~L~ 97 (635)
.|.+.|++||++||+++.++. ..+|+.+.++| . |.||.|+... ++|+.|+|++|+++| .+|+ .|+++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C-~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCC-NRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTT-TTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCC-cCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCC
Confidence 467789999999999996544 34898776767 5 9999998654 799999999999999 8998 899999999
Q ss_pred EEEeec-CCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCC
Q 006696 98 VLSLRS-NVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSN 174 (635)
Q Consensus 98 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 174 (635)
+|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..|. ++|++|+|++|+|++.+|..|.++++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 999999999999999999999999999999999887 89999999999999999999999999999999999
Q ss_pred cccCCCCCC--CCC-CCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 175 NLSGSIPNF--DIP-KLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 175 ~l~~~~~~~--~l~-~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
+|++.+|.. .++ +|+.|+|++|++++.+|..+..++ |..++
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~ 203 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVD 203 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEE
Confidence 999888864 676 999999999999999999888775 55443
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=6.4e-26 Score=249.27 Aligned_cols=177 Identities=16% Similarity=0.210 Sum_probs=144.7
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---------HHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEe
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
.++||+|+||+||+|... +..+++|+....... .+.+.+|++++.++ +||||+++..++...+..++||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTTEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCccEEEE
Confidence 568999999999999544 678888886543221 23478999999999 9999997777777888899999
Q ss_pred eeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCC
Q 006696 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++|+|.+++.. +..++.|++.||+|||+++ |+||||||+|||+++ .+||+|||+++...
T Consensus 419 E~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 419 SYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp ECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 99999999999963 4579999999999999998 999999999999998 99999999998875
Q ss_pred CCC-----------CCCCCCcccCcccccC--CCCCCccchHhHHHHHHHHHhCCCCCC
Q 006696 494 VPA-----------TPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQ 539 (635)
Q Consensus 494 ~~~-----------~~~~t~~y~aPE~~~~--~~~~~~~DvwS~Gv~l~elltg~~p~~ 539 (635)
... ...+|+.|||||++.. ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 532 2347889999999987 568888999999999999888887774
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.92 E-value=2.6e-25 Score=256.09 Aligned_cols=190 Identities=24% Similarity=0.349 Sum_probs=156.7
Q ss_pred hccCCChhHHHHHHHHHHhCCCCC-CCCCCCCCCCCCCceeeEecCCCCeEEEEEeCCCCccCc---CCc----------
Q 006696 22 LAFADLNSDRQALLDFADAVPHLR-KLNWSSTNPICQSWVGINCTQDRTRVFGLRLPGIGLVGP---IPN---------- 87 (635)
Q Consensus 22 ~~~~~~~~~~~al~~~~~~~~~~~-~~~w~~~~~~c~~w~gv~c~~~~~~v~~l~l~~~~l~g~---lp~---------- 87 (635)
.++++.+.|++||++||+++.++. ..+|+.+.+|| +|.||.|+ .++|+.|+|+++++.|. +|+
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C-~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC-TFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG-GSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc-CCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 344556789999999999985443 44898666655 89999998 48999999999999987 543
Q ss_pred ------------ccccCCCCCcEEEeecCCCCCCCCC--CCCCCCCCcEEeeccCccCCCCCCCcC---CCcceeecccc
Q 006696 88 ------------NTLGKLDALEVLSLRSNVLTGGLPS--EITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVLDLSFN 150 (635)
Q Consensus 88 ------------~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~~---~~L~~L~ls~N 150 (635)
..|+++++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+. ++|++|+|++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 2688999999999999999999998 899999999999999999999888763 78999999999
Q ss_pred cCcccCCch---hhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 151 SFTGNIPQS---IQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 151 ~l~~~~p~~---~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
++++..|.. +.++++|++|++++|.+++.+|...+++|++|+|++|++++.+|. +.++++|+.+
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L 228 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHL 228 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEE
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEE
Confidence 999888877 788888888888888888877777778888888888888876666 7766666554
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.91 E-value=4e-25 Score=248.95 Aligned_cols=186 Identities=26% Similarity=0.457 Sum_probs=161.8
Q ss_pred CChhHHHHHHHHHHhCCCCCCC----------CCCCCCCCCCCc---eeeEecCCCCeEEEEEeCCCCccCcCCcccccC
Q 006696 26 DLNSDRQALLDFADAVPHLRKL----------NWSSTNPICQSW---VGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGK 92 (635)
Q Consensus 26 ~~~~~~~al~~~~~~~~~~~~~----------~w~~~~~~c~~w---~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~~~~ 92 (635)
+...|+.||.+|++++....+. +|+.+.++| .| .||.|+.. ++|+.|+|++++++|.+|+ .|++
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~-~l~~ 103 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPD-AIGQ 103 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-GTTCCTTEEECTT-CCEEEEECTTSCCEEEECG-GGGG
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEEcCC-CCEEEEEecCcccCCcCCh-HHhc
Confidence 3346999999999998654332 698776666 89 99999864 8999999999999999998 8999
Q ss_pred CCCCcEEEeecCC-------------------------------------------------------------------
Q 006696 93 LDALEVLSLRSNV------------------------------------------------------------------- 105 (635)
Q Consensus 93 l~~L~~L~L~~N~------------------------------------------------------------------- 105 (635)
|++|++|+|++|+
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred CccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 9999999999984
Q ss_pred -----------CCCCCCCCCCCCCCCcEEeeccCccCCC-----------------CCCCcC----CCcceeecccccCc
Q 006696 106 -----------LTGGLPSEITSLPSLRYLYLQHNNFSGK-----------------IPSSFS----PQLVVLDLSFNSFT 153 (635)
Q Consensus 106 -----------l~~~~p~~~~~l~~L~~L~l~~N~l~~~-----------------~p~~~~----~~L~~L~ls~N~l~ 153 (635)
|+| +|.+|+++++|++|+|++|+|+|. +|..++ ++|++|+|++|++.
T Consensus 184 ~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~ 262 (636)
T 4eco_A 184 KDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL 262 (636)
T ss_dssp CTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC
T ss_pred hhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC
Confidence 445 888999999999999999999986 898876 78999999999999
Q ss_pred ccCCchhhccccCCcEEcCCCc-ccC-CCCCC--CC------CCCCeEEeecccCcCCCCc--ccCCCCCCCccC
Q 006696 154 GNIPQSIQNLTQLTGLSLQSNN-LSG-SIPNF--DI------PKLRHLNLSYNGLKGSIPS--SLQKFPNSSFVG 216 (635)
Q Consensus 154 ~~~p~~~~~l~~L~~L~l~~N~-l~~-~~~~~--~l------~~L~~l~l~~N~l~~~~p~--~~~~l~~l~~~~ 216 (635)
|.+|..|+++++|+.|+|++|+ ++| .+|.. .+ ++|+.|+|++|+++ .+|. .+.++++|..++
T Consensus 263 ~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~ 336 (636)
T 4eco_A 263 TKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLE 336 (636)
T ss_dssp SSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEE
T ss_pred ccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEe
Confidence 9999999999999999999998 998 67753 43 89999999999999 8888 888888877664
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=6e-25 Score=252.50 Aligned_cols=186 Identities=27% Similarity=0.472 Sum_probs=161.6
Q ss_pred CCChhHHHHHHHHHHhCCCCCCCCCCCCC-----CC-CCCc------------eeeEecCCCCeEEEEEeCCCCccCcCC
Q 006696 25 ADLNSDRQALLDFADAVPHLRKLNWSSTN-----PI-CQSW------------VGINCTQDRTRVFGLRLPGIGLVGPIP 86 (635)
Q Consensus 25 ~~~~~~~~al~~~~~~~~~~~~~~w~~~~-----~~-c~~w------------~gv~c~~~~~~v~~l~l~~~~l~g~lp 86 (635)
++...|+.||++|++++.++ +|+.++ ++ ||+| .||.|+. .++|+.|+|++++|+|.+|
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEEC
T ss_pred ccchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCc
Confidence 34457999999999999654 787654 44 2599 9999986 5899999999999999999
Q ss_pred cccccCCCCCcEEEe-ecCCCCCC--------------------------------------------------------
Q 006696 87 NNTLGKLDALEVLSL-RSNVLTGG-------------------------------------------------------- 109 (635)
Q Consensus 87 ~~~~~~l~~L~~L~L-~~N~l~~~-------------------------------------------------------- 109 (635)
+ .|++|++|++|+| ++|.++|.
T Consensus 341 ~-~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 341 D-AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp G-GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred h-HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 8 8999999999999 77765544
Q ss_pred --------------------CCCCCCCCCCCcEEeeccCccCC-----------------CCCCCcC----CCcceeecc
Q 006696 110 --------------------LPSEITSLPSLRYLYLQHNNFSG-----------------KIPSSFS----PQLVVLDLS 148 (635)
Q Consensus 110 --------------------~p~~~~~l~~L~~L~l~~N~l~~-----------------~~p~~~~----~~L~~L~ls 148 (635)
+|..|++|++|++|+|++|+|+| .+|..++ ++|++|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 88889999999999999999998 3898875 799999999
Q ss_pred cccCcccCCchhhccccCCcEEcCCCc-ccC-CCCCC---------CCCCCCeEEeecccCcCCCCc--ccCCCCCCCcc
Q 006696 149 FNSFTGNIPQSIQNLTQLTGLSLQSNN-LSG-SIPNF---------DIPKLRHLNLSYNGLKGSIPS--SLQKFPNSSFV 215 (635)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~~~~---------~l~~L~~l~l~~N~l~~~~p~--~~~~l~~l~~~ 215 (635)
+|++.+.+|..|++|++|+.|+|++|+ |+| .+|.. .+++|+.|+|++|+++ .+|. .+.++++|..+
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L 578 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLL 578 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEE
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEE
Confidence 999999999999999999999999998 988 66642 4569999999999999 8898 88888887766
Q ss_pred C
Q 006696 216 G 216 (635)
Q Consensus 216 ~ 216 (635)
+
T Consensus 579 ~ 579 (876)
T 4ecn_A 579 D 579 (876)
T ss_dssp E
T ss_pred E
Confidence 4
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.87 E-value=8.3e-23 Score=210.93 Aligned_cols=186 Identities=18% Similarity=0.317 Sum_probs=153.1
Q ss_pred cCCChhHHHHHHHHHHhCC-CC-CC-CCCC----CCCCCCCCceeeEec--------CCCCeEEEEEeCCCCccCcCCcc
Q 006696 24 FADLNSDRQALLDFADAVP-HL-RK-LNWS----STNPICQSWVGINCT--------QDRTRVFGLRLPGIGLVGPIPNN 88 (635)
Q Consensus 24 ~~~~~~~~~al~~~~~~~~-~~-~~-~~w~----~~~~~c~~w~gv~c~--------~~~~~v~~l~l~~~~l~g~lp~~ 88 (635)
.+++.+++.||++|+.++. +. .. .+|. ...++| +|.|+.|. ....+|+.|+|++|+++ .+|+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~-~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~- 98 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE-TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD- 98 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC-CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS-
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc-ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh-
Confidence 4566789999999999772 22 22 2683 334555 89999995 23468999999999999 8998
Q ss_pred cccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhc----
Q 006696 89 TLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQN---- 162 (635)
Q Consensus 89 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~---- 162 (635)
.++++++|++|+|++|+|+ .+|..++++++|++|+|++|+++ .+|..+. ++|++|+|++|++.+.+|..+..
T Consensus 99 ~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccch
Confidence 6888999999999999999 89999999999999999999999 7888877 78999999999988899987765
Q ss_pred -----cccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 163 -----LTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 163 -----l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
+++|+.|+|++|+|+ .+|.. .+++|+.|+|++|++++ +|..+.++++|..++
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELD 235 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEE
T ss_pred hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEE
Confidence 899999999999998 55543 78899999999999985 666788777776654
No 258
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=3.1e-22 Score=201.72 Aligned_cols=151 Identities=19% Similarity=0.240 Sum_probs=119.7
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccC-------------------CHHHHHHHHHHHHhhCCCCceeceeEEE
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-------------------GKRDFEQQMEIVGRVGQHPNVVPLRAYY 403 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-------------------~~~~~~~e~~~l~~l~~h~niv~l~~~~ 403 (635)
.+.||+|+||.||+|...+++.||+|+++.... ....+.+|++++.++. | +++.+++
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~---~-~~v~~~~ 170 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ---G-LAVPKVY 170 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT---T-SSSCCEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc---C-CCcCeEE
Confidence 378999999999999997789999999964321 1345889999999994 4 6666655
Q ss_pred EeCCceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEE
Q 006696 404 YSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI 483 (635)
Q Consensus 404 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki 483 (635)
.. +..++||||+++|+|.+ +.. .....++.|++.||+|||+.+ |+||||||+|||++ ++.+||
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl 233 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWI 233 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEE
T ss_pred ec-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEE
Confidence 43 56799999999999998 431 124469999999999999998 99999999999999 999999
Q ss_pred eccCCCCCCCCCCCCCCCCcccCcccccC----------CCCCCccchHh
Q 006696 484 SDFGLTPLMNVPATPSRSAGYRAPEVIET----------RKHSHKSDVYS 523 (635)
Q Consensus 484 ~DfGla~~~~~~~~~~~t~~y~aPE~~~~----------~~~~~~~DvwS 523 (635)
+|||+|+.. ..|+|||++.. ..++..+|+|.
T Consensus 234 ~DFG~a~~~---------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 234 IDFPQSVEV---------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp CCCTTCEET---------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EECCCCeEC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 999998643 34789998854 34555666654
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.85 E-value=9.4e-22 Score=226.45 Aligned_cols=114 Identities=39% Similarity=0.690 Sum_probs=88.1
Q ss_pred CCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEE
Q 006696 117 LPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLN 192 (635)
Q Consensus 117 l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~ 192 (635)
+++|+.|||++|+++|.+|..++ ++|+.|+|++|+|+|.+|..|+++++|+.|+|++|+++|.+|.. .+++|+.||
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 45666777777777777777766 67778888888888888888888888888888888888877765 777888888
Q ss_pred eecccCcCCCCcc--cCCCCCCCccCCCCCCCCCCCCCCC
Q 006696 193 LSYNGLKGSIPSS--LQKFPNSSFVGNSLLCGPPLKACFP 230 (635)
Q Consensus 193 l~~N~l~~~~p~~--~~~l~~l~~~~n~~~~g~~l~~c~~ 230 (635)
|++|+++|.+|.. |..++.+.|.+|+.+||.++..|.+
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~ 750 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCS
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCC
Confidence 8888888888853 5667777889999999988777743
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.83 E-value=2.4e-20 Score=184.83 Aligned_cols=151 Identities=25% Similarity=0.258 Sum_probs=123.5
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeec
Q 006696 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~l 147 (635)
.++.|+|++|++++..+ ..|+++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|. ++|++|+|
T Consensus 36 ~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSD-ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEccCCCcCccCH-hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 57789999999985444 4799999999999999999987788889999999999999999966666665 78999999
Q ss_pred ccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCcc---CCCCCC
Q 006696 148 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV---GNSLLC 221 (635)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~---~n~~~~ 221 (635)
++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++++..+..+.++++|..+ +|+..|
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 999999777777889999999999999999777643 78899999999999997777777777666544 444433
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1e-19 Score=177.70 Aligned_cols=149 Identities=27% Similarity=0.266 Sum_probs=96.1
Q ss_pred CCCCCCCCCCceeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCC
Q 006696 49 WSSTNPICQSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPS 119 (635)
Q Consensus 49 w~~~~~~c~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 119 (635)
|......| +|.+|.|+... .+++.|+|++|++++..|. .|.++++|++|+|++|+|+...+..|.++++
T Consensus 12 ~~~~~~~C-s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 89 (229)
T 3e6j_A 12 ACPSQCSC-SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPG-VFDSLINLKELYLGSNQLGALPVGVFDSLTQ 89 (229)
T ss_dssp CCCTTCEE-ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred cCCCCCEE-eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHH-HhhCccCCcEEECCCCCCCCcChhhcccCCC
Confidence 54455667 89999997532 2466677777777654443 5666777777777777776444445566777
Q ss_pred CcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeec
Q 006696 120 LRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSY 195 (635)
Q Consensus 120 L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~ 195 (635)
|++|+|++|+|++..+..|. ++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+.. .+++|+.|+|++
T Consensus 90 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 168 (229)
T 3e6j_A 90 LTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFG 168 (229)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 77777777777654444443 56777777777776 56666666777777777777776554432 566677777777
Q ss_pred ccCcC
Q 006696 196 NGLKG 200 (635)
Q Consensus 196 N~l~~ 200 (635)
|.+..
T Consensus 169 N~~~c 173 (229)
T 3e6j_A 169 NPWDC 173 (229)
T ss_dssp SCBCT
T ss_pred CCccC
Confidence 76664
No 262
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.79 E-value=3e-20 Score=190.51 Aligned_cols=145 Identities=22% Similarity=0.366 Sum_probs=116.2
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCC-CCcEEeeccCccCCCCCCCcC-CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLP-SLRYLYLQHNNFSGKIPSSFS-PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~-~~L~~L~ 146 (635)
.+++.|+|++|.+++.+|. .++.+++|++|+|++|+++|.+|..+.+++ +|++|+|++|++++.+|..+. ..|++|+
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~ 203 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPP-SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD 203 (313)
T ss_dssp TTCCEEECCSSEEESCCCG-GGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEE
T ss_pred CCCCEEeCCCCccCCcCCh-HHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEE
Confidence 4688999999999988888 799999999999999999999999999998 999999999999988888776 3488888
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCC-CCCCCCeEEeecccCcCCCCcccCCCCCCCc
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 214 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~ 214 (635)
|++|++++.+|..|..+++|+.|+|++|++++.+|.. .+++|+.|+|++|++++.+|..+.++++|..
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 272 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHS 272 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCE
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCE
Confidence 8888888878877777777777777777777666654 5566666666666666666666655555443
No 263
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.79 E-value=4.7e-19 Score=170.20 Aligned_cols=145 Identities=26% Similarity=0.290 Sum_probs=120.6
Q ss_pred CceeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccC
Q 006696 58 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 58 ~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (635)
.|.+|.|.... .+++.|+|++|+++ .+++..|+.+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 8 ~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 8 SGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEecCCCccCCCCCCCCCCcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 89999997532 35889999999998 566657899999999999999999666666889999999999999
Q ss_pred ccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCC
Q 006696 129 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 129 ~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p 203 (635)
++++..+..|. ++|++|+|++|+|++..+..|.++++|+.|+|++|+|++.++.. .+++|+.|+|++|.+.+..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 99966555555 78999999999999777777899999999999999999776653 78899999999998876443
No 264
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.79 E-value=4.4e-19 Score=177.81 Aligned_cols=146 Identities=25% Similarity=0.286 Sum_probs=105.3
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeec
Q 006696 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~l 147 (635)
.++.|+|++|+++ .+|+..|+++++|++|+|++|+++...+..|.++++|++|+|++|++++..+..|. ++|++|+|
T Consensus 38 ~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 4667777777777 45554677888888888888888744445567788888888888888755444444 67888888
Q ss_pred ccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 148 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
++|+|++..+..|..+++|++|+|++|+|++..+.. .+++|+.|+|++|++++..+..|.++++|..++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 187 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK 187 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEE
Confidence 888888776777778888888888888887655542 677888888888888766666676666666553
No 265
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=2.6e-19 Score=173.61 Aligned_cols=145 Identities=20% Similarity=0.249 Sum_probs=90.5
Q ss_pred EEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCC-CCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeeccc
Q 006696 73 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSF 149 (635)
Q Consensus 73 ~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~ 149 (635)
.+++++|+++ .+|. .+. ..+++|+|++|+|++..| ..|.++++|++|+|++|+|++..|..|. ++|++|+|++
T Consensus 15 ~l~~s~n~l~-~iP~-~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPE-HIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCS-CCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCcc-CCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 4666666666 4665 232 345677777777765444 3366677777777777777655555555 5677777777
Q ss_pred ccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCc---cCCCCCC
Q 006696 150 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF---VGNSLLC 221 (635)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~---~~n~~~~ 221 (635)
|+|++..|..|.++++|++|+|++|+|++..|.. .+++|+.|+|++|+|++..|..|..+++|.. .+|+..|
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 7777666666667777777777777777655543 5667777777777777666666665555443 3444444
No 266
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=5e-19 Score=171.59 Aligned_cols=135 Identities=24% Similarity=0.270 Sum_probs=70.5
Q ss_pred EEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeeccccc
Q 006696 74 LRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNS 151 (635)
Q Consensus 74 l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~ 151 (635)
+++++++++ .+|. .+. ++|+.|+|++|+|++..|..|.++++|++|+|++|++++..|..|. ++|++|+|++|+
T Consensus 16 v~c~~~~l~-~iP~-~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 16 VDCRGKGLT-EIPT-NLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EECTTSCCS-SCCS-SCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEcCCCCcC-cCCC-ccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 344444554 4554 222 4555555555555544444555555555555555555554455554 455555555555
Q ss_pred CcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCC
Q 006696 152 FTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNS 212 (635)
Q Consensus 152 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l 212 (635)
|++..+..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++..+..|..+++|
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 154 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAI 154 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCC
Confidence 55433344555555555555555555544432 45555555555555554444444444433
No 267
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=2.3e-18 Score=166.89 Aligned_cols=142 Identities=23% Similarity=0.240 Sum_probs=126.3
Q ss_pred CceeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccC
Q 006696 58 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 58 ~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (635)
.|..|.|.+.. .+++.|+|++|+++ .+++..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~-~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 12 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp ETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCC-EECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCC-CcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 79999997532 36899999999999 466668999999999999999999888999999999999999999
Q ss_pred ccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcC
Q 006696 129 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 129 ~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~ 200 (635)
+|++..+..|. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 99954444454 89999999999999988999999999999999999999877763 78999999999999873
No 268
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=3e-18 Score=166.10 Aligned_cols=145 Identities=20% Similarity=0.209 Sum_probs=129.8
Q ss_pred CceeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccC
Q 006696 58 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 58 ~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (635)
.|..+.|+.+. ..++.|+|++|++++..|.+.|+.+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 12 EGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 79999997532 247799999999997667667999999999999999999877789999999999999999
Q ss_pred ccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCC
Q 006696 129 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSI 202 (635)
Q Consensus 129 ~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~ 202 (635)
++++..|..|. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|.. .+++|+.|+|++|.+++.-
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99987777776 89999999999999988999999999999999999999887765 7999999999999998643
No 269
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.6e-18 Score=172.25 Aligned_cols=132 Identities=14% Similarity=0.160 Sum_probs=101.5
Q ss_pred hccccccCceEEEEEEe-cCCCe--EEEEEeecccCC-------------------------HHHHHHHHHHHHhhCCCC
Q 006696 343 AEVLGKGSYGTAYKAVL-EESTT--VVVKRLKEVVVG-------------------------KRDFEQQMEIVGRVGQHP 394 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~-~~~~~--vavK~~~~~~~~-------------------------~~~~~~e~~~l~~l~~h~ 394 (635)
.+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|+.++.++ +|+
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~ 130 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA-KEA 130 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH-HHT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH-HhC
Confidence 36799999999999998 67888 999987543211 12578899999998 666
Q ss_pred ce--eceeEEEEeCCceEEEeeeccC-C----ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCceec
Q 006696 395 NV--VPLRAYYYSKDEKLLVYDYFAS-G----SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH-SMGGPKFTHG 466 (635)
Q Consensus 395 ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivHr 466 (635)
++ +..+.. +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~g---ivHr 195 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAE---LVHA 195 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSC---EECS
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCC---EEeC
Confidence 53 333432 367899999953 4 55554321 224467789999999999999 888 9999
Q ss_pred CCCCCCEEEcCCCCeEEeccCCCCCC
Q 006696 467 NIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 467 Dlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
||||+|||+++ .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999999754
No 270
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.75 E-value=9.4e-18 Score=168.07 Aligned_cols=153 Identities=24% Similarity=0.287 Sum_probs=132.2
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.++ .+|++.|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|. ++|++|+
T Consensus 61 ~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp TTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 57899999999999 67876789999999999999999976667789999999999999999977777665 8999999
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCC---ccCCCCCC
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLC 221 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~---~~~n~~~~ 221 (635)
|++|+|++..+..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..+..+..+++|. +.+|+..|
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 9999999777777999999999999999999877653 789999999999999976666677766655 44566555
Q ss_pred C
Q 006696 222 G 222 (635)
Q Consensus 222 g 222 (635)
.
T Consensus 220 ~ 220 (270)
T 2o6q_A 220 T 220 (270)
T ss_dssp S
T ss_pred C
Confidence 4
No 271
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.75 E-value=7.8e-18 Score=168.82 Aligned_cols=150 Identities=26% Similarity=0.311 Sum_probs=130.7
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.+++ ++ .++.+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|. ++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 578999999999985 44 699999999999999999977777789999999999999999977776666 8999999
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCcc---CCCCCC
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV---GNSLLC 221 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~---~n~~~~ 221 (635)
|++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++++..|..+.++++|..+ +|+..|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 9999999877788899999999999999999877754 78999999999999998888778877776655 454443
No 272
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.75 E-value=1.8e-18 Score=178.34 Aligned_cols=144 Identities=26% Similarity=0.393 Sum_probs=128.0
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCc----------
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSF---------- 138 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~---------- 138 (635)
.+++.|+|++|+++ .+|. .++++++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..+
T Consensus 104 ~~L~~L~L~~n~l~-~lp~-~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPD-TMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp TTCSEEEEESSCCC-CCCS-CGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCEEECCCCCcc-chhH-HHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 46889999999999 8997 7999999999999999999 889999999999999999999999999877
Q ss_pred -CCCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC-CCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 139 -SPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 139 -~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
.++|++|+|++|+|+ .+|..++++++|++|+|++|++++.++.. .+++|+.|+|++|++.+.+|..+.++++|..++
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 378999999999999 88889999999999999999999765554 788999999999999999999888888877664
No 273
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.74 E-value=1.4e-18 Score=181.69 Aligned_cols=165 Identities=28% Similarity=0.281 Sum_probs=138.8
Q ss_pred CceeeEecCCC---------CeEEEEEeCCCCccCcCCccccc-CCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeecc
Q 006696 58 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLG-KLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 127 (635)
Q Consensus 58 ~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 127 (635)
+|..+.|.... ..++.|+|++|+|++ +++..+. ++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 19 ~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~-l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 19 ASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp ETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCE-ECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCc-cChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 68888887532 247889999999995 5555787 999999999999999977778899999999999999
Q ss_pred CccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC-----CCCCCCeEEeecccCcC
Q 006696 128 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-----DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 128 N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-----~l~~L~~l~l~~N~l~~ 200 (635)
|+|++..+..|. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 999976666666 89999999999999888999999999999999999999755442 58999999999999996
Q ss_pred CCCcccCCCC-----CCCccCCCCCCCC
Q 006696 201 SIPSSLQKFP-----NSSFVGNSLLCGP 223 (635)
Q Consensus 201 ~~p~~~~~l~-----~l~~~~n~~~~g~ 223 (635)
..+..+..++ .|...+|+..|.+
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred cCHHHhhhccHhhcceEEecCCCccCCc
Confidence 5556666664 4667788887764
No 274
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=1.5e-17 Score=162.31 Aligned_cols=153 Identities=25% Similarity=0.342 Sum_probs=127.9
Q ss_pred ceeeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCc
Q 006696 59 WVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSF 138 (635)
Q Consensus 59 w~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 138 (635)
|..-.|+. +.++.++++++ .+|.+ +. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|
T Consensus 14 ~~~~~Cs~-----~~v~c~~~~l~-~ip~~-~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 84 (229)
T 3e6j_A 14 PSQCSCSG-----TTVDCRSKRHA-SVPAG-IP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF 84 (229)
T ss_dssp CTTCEEET-----TEEECTTSCCS-SCCSC-CC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCCCEEeC-----CEeEccCCCcC-ccCCC-CC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc
Confidence 45567764 45899999998 89873 43 899999999999998889999999999999999999985555555
Q ss_pred C--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCc
Q 006696 139 S--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 214 (635)
Q Consensus 139 ~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~ 214 (635)
. ++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|.. .+++|+.|+|++|+|++..+..|.++++|..
T Consensus 85 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 163 (229)
T 3e6j_A 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTH 163 (229)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCE
Confidence 5 89999999999999777778999999999999999999 45543 8999999999999999776677877777654
Q ss_pred c---CCCCCC
Q 006696 215 V---GNSLLC 221 (635)
Q Consensus 215 ~---~n~~~~ 221 (635)
+ +|+..|
T Consensus 164 L~l~~N~~~c 173 (229)
T 3e6j_A 164 AYLFGNPWDC 173 (229)
T ss_dssp EECTTSCBCT
T ss_pred EEeeCCCccC
Confidence 4 555544
No 275
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.72 E-value=1.4e-17 Score=168.09 Aligned_cols=147 Identities=22% Similarity=0.187 Sum_probs=107.4
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCC-CCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCccee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNV-LTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L 145 (635)
.+++.|+|++|.+++..|. .|+++++|++|+|++|+ ++...|..|.++++|++|+|++|++++..|..+. ++|++|
T Consensus 56 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAA-AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp TTCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCccceeCHh-hcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 4677788888887754454 67788888888888886 6655567777888888888888888766666665 678888
Q ss_pred ecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
+|++|++++..+..|+.+++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..|..+.++++|..++
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 207 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 207 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEee
Confidence 88888887666666777788888888888777655542 677778888888877777777777666665543
No 276
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=4.3e-18 Score=161.27 Aligned_cols=128 Identities=27% Similarity=0.310 Sum_probs=110.6
Q ss_pred EEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCC-CCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecc
Q 006696 72 FGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-EITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLS 148 (635)
Q Consensus 72 ~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls 148 (635)
+.+++++++++ .+|. .+.. +|++|+|++|+|++..|. .|.++++|++|+|++|+|++..|..|. ++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~-~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPR-DIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCS-CCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCcc-CCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 45778888886 7887 4443 899999999999966554 489999999999999999988888887 799999999
Q ss_pred cccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCC
Q 006696 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p 203 (635)
+|+|++..|..|.++++|++|+|++|+|++.+|.. .+++|+.|+|++|.+++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99999888888999999999999999999887765 78999999999999987554
No 277
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.72 E-value=3.4e-17 Score=165.66 Aligned_cols=143 Identities=31% Similarity=0.329 Sum_probs=102.3
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
..++.|+|++|.+++..|. .|.++++|++|+|++|+|++ +|.. +.+++|++|+|++|+++ .+|..+. ++|++|+
T Consensus 31 ~~l~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLA-TLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD 106 (290)
T ss_dssp TTCCEEECTTSCCSEEEGG-GGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEE
T ss_pred CCCCEEEcCCCcCCccCHH-HhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEE
Confidence 3577888888888754443 78888888888888888874 4432 67778888888888877 5666554 6778888
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
|++|+|++..|..|.++++|+.|+|++|+|++.++.. .+++|+.|+|++|+|++..+..|.++++|..+
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 177 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL 177 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEE
Confidence 8888887666677777888888888888887665543 67778888888888775555555666665544
No 278
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.71 E-value=2.8e-17 Score=165.95 Aligned_cols=147 Identities=24% Similarity=0.233 Sum_probs=129.8
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCc-cCCCCCCCcC--CCccee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN-FSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~--~~L~~L 145 (635)
.+++.|+|++|++++ +++..|+++++|++|+|++|++++..|..|.++++|++|+|++|. +....|..+. ++|++|
T Consensus 32 ~~l~~L~l~~n~i~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISH-VPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCc-cCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 468999999999995 565589999999999999999998889999999999999999998 7766577776 899999
Q ss_pred ecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
+|++|++++..|..|.++++|++|+|++|++++..+.. .+++|+.|+|++|++++..+..+.++++|..++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 99999999888999999999999999999999777653 799999999999999976666788888776654
No 279
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=3e-17 Score=155.47 Aligned_cols=152 Identities=25% Similarity=0.263 Sum_probs=121.4
Q ss_pred CceeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccC
Q 006696 58 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 58 ~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (635)
.|+.+.|+.+. .+++.|+|++|++++..+.+.|+.+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 9 ~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 9 EGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp ETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 79999997532 378999999999986554445999999999999999999888999999999999999999
Q ss_pred ccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCCCC-CCCCeEEeecccCcCCCCcc
Q 006696 129 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDI-PKLRHLNLSYNGLKGSIPSS 205 (635)
Q Consensus 129 ~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l-~~L~~l~l~~N~l~~~~p~~ 205 (635)
+|++..|..|. ++|++|+|++|+|++.+|..|..+++|+.|+|++|.+++..+...+ ..|+...+..+......|..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~ 168 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSK 168 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTT
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChH
Confidence 99988887776 8999999999999999999999999999999999999976553211 11222233444444344554
Q ss_pred cCCC
Q 006696 206 LQKF 209 (635)
Q Consensus 206 ~~~l 209 (635)
+.+.
T Consensus 169 l~~~ 172 (192)
T 1w8a_A 169 VRDV 172 (192)
T ss_dssp TTTS
T ss_pred HcCC
Confidence 4443
No 280
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.71 E-value=1.2e-17 Score=170.32 Aligned_cols=157 Identities=24% Similarity=0.302 Sum_probs=100.3
Q ss_pred CCceeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCC--CCCCCCCCCCCcEEee
Q 006696 57 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGG--LPSEITSLPSLRYLYL 125 (635)
Q Consensus 57 ~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~l 125 (635)
|.|.+|.|+... .+++.|+|++|+++ .+|++.|+++++|++|+|++|+++.. +|..+.++++|++|+|
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 489999998532 36899999999998 78886789999999999999999832 2445556666666666
Q ss_pred ccCccCCCCCCCcC--CCcceeecccccCcccCC-chhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcC
Q 006696 126 QHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIP-QSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 126 ~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~ 200 (635)
++|.++ .+|..+. ++|++|+|++|++++..+ ..+..+++|++|++++|.+.+..+.. .+++|+.|+|++|.+++
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 666665 3444333 455566666665554333 34555555555555555555544442 45555555555555554
Q ss_pred -CCCcccCCCCCCCcc
Q 006696 201 -SIPSSLQKFPNSSFV 215 (635)
Q Consensus 201 -~~p~~~~~l~~l~~~ 215 (635)
.+|..+.++++|..+
T Consensus 165 ~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 165 NFLPDIFTELRNLTFL 180 (306)
T ss_dssp GEECSCCTTCTTCCEE
T ss_pred ccchhHHhhCcCCCEE
Confidence 344555554444433
No 281
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.71 E-value=8.2e-17 Score=159.32 Aligned_cols=154 Identities=24% Similarity=0.316 Sum_probs=135.8
Q ss_pred CCCceeeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCC
Q 006696 56 CQSWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIP 135 (635)
Q Consensus 56 c~~w~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 135 (635)
|..|.|+.|.. ..+.+++++++++ .+|. .+. ++|+.|+|++|++++..|..|.++++|++|+|++|++++..|
T Consensus 4 Cp~~~gC~C~~---~~~~l~~~~~~l~-~~p~-~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 4 CETVTGCTCNE---GKKEVDCQGKSLD-SVPS-GIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp CHHHHSSEEEG---GGTEEECTTCCCS-SCCS-CCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred CCCCCceEcCC---CCeEEecCCCCcc-ccCC-CCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 66899999964 3457899999999 7887 454 689999999999998888899999999999999999998877
Q ss_pred CCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCC
Q 006696 136 SSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPN 211 (635)
Q Consensus 136 ~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~ 211 (635)
..|. ++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+.. .+++|+.|+|++|+|++..+..|.++++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 7776 89999999999999888888999999999999999999777754 7999999999999999777778888888
Q ss_pred CCccC
Q 006696 212 SSFVG 216 (635)
Q Consensus 212 l~~~~ 216 (635)
|..++
T Consensus 157 L~~L~ 161 (251)
T 3m19_A 157 LQTLS 161 (251)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 77664
No 282
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.71 E-value=6.9e-18 Score=175.95 Aligned_cols=165 Identities=25% Similarity=0.243 Sum_probs=128.9
Q ss_pred CCCCCCCCCCceeeEecCC-----------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCC
Q 006696 49 WSSTNPICQSWVGINCTQD-----------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSL 117 (635)
Q Consensus 49 w~~~~~~c~~w~gv~c~~~-----------~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 117 (635)
|......| .|.|+ |+.. ..+++.|+|++|++++ +|+..|+++++|++|+|++|++++..|..|.++
T Consensus 23 ~~~~~~~C-~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (353)
T 2z80_A 23 SNQASLSC-DRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL 99 (353)
T ss_dssp ----CCEE-CTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred CCccCCCC-CCCeE-eeCCCCCcccccccccccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCC
Confidence 44344455 78887 5421 1368899999999984 666579999999999999999998778889999
Q ss_pred CCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCC-chhhccccCCcEEcCCCc-ccCCCCCC--CCCCCCeE
Q 006696 118 PSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIP-QSIQNLTQLTGLSLQSNN-LSGSIPNF--DIPKLRHL 191 (635)
Q Consensus 118 ~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~-l~~~~~~~--~l~~L~~l 191 (635)
++|++|+|++|++++..+..|. ++|++|+|++|++++..+ ..|.++++|++|++++|+ +.+..+.. .+++|+.|
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L 179 (353)
T 2z80_A 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEEL 179 (353)
T ss_dssp TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEE
Confidence 9999999999999954443354 789999999999994333 378999999999999994 66554543 78899999
Q ss_pred EeecccCcCCCCcccCCCCCCCccC
Q 006696 192 NLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 192 ~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
++++|++++..|..+.++++|+.++
T Consensus 180 ~l~~n~l~~~~~~~l~~l~~L~~L~ 204 (353)
T 2z80_A 180 EIDASDLQSYEPKSLKSIQNVSHLI 204 (353)
T ss_dssp EEEETTCCEECTTTTTTCSEEEEEE
T ss_pred ECCCCCcCccCHHHHhccccCCeec
Confidence 9999999988888888888776654
No 283
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.70 E-value=9.5e-18 Score=188.65 Aligned_cols=153 Identities=20% Similarity=0.218 Sum_probs=130.8
Q ss_pred eeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCcc
Q 006696 60 VGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF 130 (635)
Q Consensus 60 ~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 130 (635)
..|.|.... ..++.|||++|+|+ .+|+..|+++++|++|+|++|+|++..|..|.+|++|++|+|++|+|
T Consensus 34 ~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 34 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp TEEECTTSCCSSCCSSSCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CEEECCCCCcCccCCCCCcCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 357786422 36899999999999 67776899999999999999999977778899999999999999999
Q ss_pred CCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCC-CCCC--CCCCCCeEEeecccCcCCCCcc
Q 006696 131 SGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGS-IPNF--DIPKLRHLNLSYNGLKGSIPSS 205 (635)
Q Consensus 131 ~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~--~l~~L~~l~l~~N~l~~~~p~~ 205 (635)
++..|..|. ++|++|+|++|+|++..+..|+++++|++|+|++|+|++. +|.. .+++|++|+|++|++++..|..
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccc
Confidence 966556666 8999999999999987777899999999999999999863 4443 7899999999999999888888
Q ss_pred cCCCCCCC
Q 006696 206 LQKFPNSS 213 (635)
Q Consensus 206 ~~~l~~l~ 213 (635)
+..+.++.
T Consensus 193 l~~L~~l~ 200 (635)
T 4g8a_A 193 LRVLHQMP 200 (635)
T ss_dssp GHHHHTCT
T ss_pred ccchhhhh
Confidence 77665544
No 284
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.70 E-value=1.8e-16 Score=152.03 Aligned_cols=151 Identities=24% Similarity=0.331 Sum_probs=125.4
Q ss_pred eEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--
Q 006696 62 INCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS-- 139 (635)
Q Consensus 62 v~c~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-- 139 (635)
..|.. +.+++++++++ .+|.+ + .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.
T Consensus 5 C~C~~-----~~v~c~~~~l~-~~p~~-~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 75 (208)
T 2o6s_A 5 CSCSG-----TTVECYSQGRT-SVPTG-I--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKL 75 (208)
T ss_dssp CEEET-----TEEECCSSCCS-SCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTC
T ss_pred CEECC-----CEEEecCCCcc-CCCCC-C--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCC
Confidence 46753 46889999998 68863 3 46899999999999976667789999999999999999966555555
Q ss_pred CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCcc--
Q 006696 140 PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV-- 215 (635)
Q Consensus 140 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~-- 215 (635)
++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+.. .+++|+.|+|++|++++..+..+.++++|..+
T Consensus 76 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 155 (208)
T 2o6s_A 76 TSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWL 155 (208)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred CCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEe
Confidence 89999999999999777777899999999999999999877753 78999999999999997777667777776654
Q ss_pred -CCCCCC
Q 006696 216 -GNSLLC 221 (635)
Q Consensus 216 -~n~~~~ 221 (635)
+|+..|
T Consensus 156 ~~N~~~~ 162 (208)
T 2o6s_A 156 HDNPWDC 162 (208)
T ss_dssp CSCCBCC
T ss_pred cCCCeec
Confidence 554443
No 285
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.70 E-value=8.5e-18 Score=186.01 Aligned_cols=157 Identities=24% Similarity=0.261 Sum_probs=135.5
Q ss_pred CCCceeeEecCC-----------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEe
Q 006696 56 CQSWVGINCTQD-----------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLY 124 (635)
Q Consensus 56 c~~w~gv~c~~~-----------~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 124 (635)
| .|.|+ |+.. ..+++.|+|++|++++..|. .|+++++|++|+|++|++++..|..|.++++|++|+
T Consensus 4 C-~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 4 C-DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHG-DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp E-CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSS-TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred C-CCCce-EECCCCccccccccCCCCccEEECcCCccCccChh-hhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 5 79988 7632 13689999999999965555 899999999999999999988889999999999999
Q ss_pred eccCccCCCCCCCcC--CCcceeecccccCcc-cCCchhhccccCCcEEcCCCcccCCCCC--C-CCCCCCeEEeecccC
Q 006696 125 LQHNNFSGKIPSSFS--PQLVVLDLSFNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPN--F-DIPKLRHLNLSYNGL 198 (635)
Q Consensus 125 l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~--~-~l~~L~~l~l~~N~l 198 (635)
|++|++++..|..|. ++|++|+|++|++++ .+|..++++++|++|++++|++.+.+|. . .+++|+.|++++|++
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 999999977776676 899999999999996 4678899999999999999996555653 2 789999999999999
Q ss_pred cCCCCcccCCCCCCCcc
Q 006696 199 KGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 199 ~~~~p~~~~~l~~l~~~ 215 (635)
++..|..+.++++|..+
T Consensus 161 ~~~~~~~l~~l~~L~~L 177 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHL 177 (549)
T ss_dssp CEECTTTTTTCSEEEEE
T ss_pred cccChhhhhccccCceE
Confidence 99999998888776554
No 286
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.70 E-value=5.1e-17 Score=164.41 Aligned_cols=149 Identities=28% Similarity=0.316 Sum_probs=107.4
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|+++ .++. .+.+++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++..|..|. ++|++|+
T Consensus 55 ~~L~~L~L~~n~l~-~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 55 TRLTQLNLDRAELT-KLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp TTCCEEECTTSCCC-EEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccC-cccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 46777888888877 3554 367788888888888887 6777778888888888888888865556665 6788888
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCC---ccCCCCCC
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLC 221 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~---~~~n~~~~ 221 (635)
|++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+|+ .+|..+..+.+|. ..+|+..|
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 8888888666666777888888888888888555543 5778888888888887 5666655544443 34555554
Q ss_pred C
Q 006696 222 G 222 (635)
Q Consensus 222 g 222 (635)
.
T Consensus 210 ~ 210 (290)
T 1p9a_G 210 N 210 (290)
T ss_dssp S
T ss_pred c
Confidence 3
No 287
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.69 E-value=1.2e-16 Score=160.25 Aligned_cols=136 Identities=29% Similarity=0.349 Sum_probs=121.0
Q ss_pred CCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcce
Q 006696 67 DRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVV 144 (635)
Q Consensus 67 ~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~ 144 (635)
...+++.|+|++|++++ +++..++++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+. ++|++
T Consensus 83 ~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 161 (272)
T 3rfs_A 83 ELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTE 161 (272)
T ss_dssp TCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCCCEEECCCCccCc-cChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCE
Confidence 34579999999999995 5555799999999999999999977777799999999999999999977666665 89999
Q ss_pred eecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCC
Q 006696 145 LDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 145 L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p 203 (635)
|+|++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|.+.+..|
T Consensus 162 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 162 LDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 999999999888888899999999999999999887764 79999999999999987554
No 288
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.69 E-value=3e-17 Score=183.49 Aligned_cols=170 Identities=19% Similarity=0.165 Sum_probs=137.5
Q ss_pred CCCCCCCCCCCC---ceeeEecC------C----------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCC
Q 006696 47 LNWSSTNPICQS---WVGINCTQ------D----------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLT 107 (635)
Q Consensus 47 ~~w~~~~~~c~~---w~gv~c~~------~----------~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~ 107 (635)
.+|.++.+||.. |.++.|+. . -.++..|++++|.+. .+|+..++++++|++|+|++|.|+
T Consensus 10 ~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~ 88 (597)
T 3oja_B 10 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE 88 (597)
T ss_dssp -CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCC
T ss_pred cCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCC
Confidence 368766666643 65555541 0 034677899999887 688878899999999999999999
Q ss_pred CCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--
Q 006696 108 GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-- 183 (635)
Q Consensus 108 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-- 183 (635)
+..|..|+++++|++|+|++|.+++..|..|. ++|++|+|++|+|++..+..|+++++|++|+|++|.|++.+|..
T Consensus 89 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 168 (597)
T 3oja_B 89 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 168 (597)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTT
T ss_pred CCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhh
Confidence 88888999999999999999999987777776 89999999999999666666799999999999999999888764
Q ss_pred CCCCCCeEEeecccCcCCCCcccCCCCCCCccCC
Q 006696 184 DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVGN 217 (635)
Q Consensus 184 ~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~n 217 (635)
.+++|+.|+|++|.+++..+..+.++..|...+|
T Consensus 169 ~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 169 ATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp TCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSS
T ss_pred cCCcCcEEECcCCCCCCcChhhhhhhhhhhcccC
Confidence 8999999999999999765555555555544444
No 289
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.69 E-value=2.6e-17 Score=174.05 Aligned_cols=169 Identities=20% Similarity=0.183 Sum_probs=131.4
Q ss_pred CCCCCCCCCCCceeeEecCC-------------------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCC
Q 006696 48 NWSSTNPICQSWVGINCTQD-------------------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG 108 (635)
Q Consensus 48 ~w~~~~~~c~~w~gv~c~~~-------------------~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~ 108 (635)
+|....+||+.|.+..|... -.+++.|+++++.+. .+|+..+..+++|++|+|++|++++
T Consensus 5 ~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~ 83 (390)
T 3o6n_A 5 PRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEE 83 (390)
T ss_dssp --CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCE
T ss_pred CCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccc
Confidence 67766677765555545210 145778999999988 7888778999999999999999997
Q ss_pred CCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--C
Q 006696 109 GLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--D 184 (635)
Q Consensus 109 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~ 184 (635)
..|..|.++++|++|+|++|++++..|..|. ++|++|+|++|+|+...+..|.++++|++|+|++|++++..|.. .
T Consensus 84 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 163 (390)
T 3o6n_A 84 IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQA 163 (390)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSS
T ss_pred cChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccC
Confidence 7778999999999999999999987777776 89999999999999554455799999999999999999877764 8
Q ss_pred CCCCCeEEeecccCcCCCCcccCCCCCCCccCC
Q 006696 185 IPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVGN 217 (635)
Q Consensus 185 l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~n 217 (635)
+++|+.|++++|++++.....+.++..|...+|
T Consensus 164 l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 164 TTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196 (390)
T ss_dssp CTTCCEEECCSSCCSBCCGGGCTTCSEEECCSS
T ss_pred CCCCCEEECCCCcCCccccccccccceeecccc
Confidence 899999999999999754444444444444443
No 290
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.69 E-value=6.4e-17 Score=174.51 Aligned_cols=157 Identities=21% Similarity=0.163 Sum_probs=114.5
Q ss_pred CceeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccC
Q 006696 58 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 58 ~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (635)
.|..|.|.... .+++.|+|++|++++..|. .|+++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQAD-TFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHH-HcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 46788887532 3689999999999965554 8999999999999999999888899999999999999999
Q ss_pred ccCCCCCCCcC--CCcceeecccccCcccCCchhhcc-------------------------ccCCcEEcCCCcccCCCC
Q 006696 129 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNL-------------------------TQLTGLSLQSNNLSGSIP 181 (635)
Q Consensus 129 ~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l-------------------------~~L~~L~l~~N~l~~~~~ 181 (635)
++++..+..|. ++|++|+|++|+|++..+..|.++ ++|+.|+|++|+|++...
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 213 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN 213 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccccc
Confidence 99965555565 789999999999886555455544 445555555555553322
Q ss_pred CCCCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 182 NFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 182 ~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
...+++|+.|+|++|++++..|..|.++++|..+
T Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 247 (452)
T 3zyi_A 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKL 247 (452)
T ss_dssp CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEE
T ss_pred ccccccccEEECcCCcCcccCcccccCccCCCEE
Confidence 2255666666666666666656666666555543
No 291
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.69 E-value=5.4e-17 Score=176.38 Aligned_cols=158 Identities=22% Similarity=0.207 Sum_probs=136.1
Q ss_pred CceeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccC
Q 006696 58 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 58 ~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (635)
.|..|.|.... .+++.|+|++|++++..|. .|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQD-EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHh-HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 47889997432 3688999999999964444 8999999999999999999888999999999999999999
Q ss_pred ccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCc
Q 006696 129 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPS 204 (635)
Q Consensus 129 ~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~ 204 (635)
++++..+..|. ++|++|+|++|++++..|..|.++++|+.|+|++|.+++..+.. .+++|+.|+|++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99965555555 89999999999999999999999999999999999999877654 789999999999999976666
Q ss_pred ccCCCCCCCccC
Q 006696 205 SLQKFPNSSFVG 216 (635)
Q Consensus 205 ~~~~l~~l~~~~ 216 (635)
.+.++++|..+.
T Consensus 171 ~l~~l~~L~~L~ 182 (477)
T 2id5_A 171 ALSHLHGLIVLR 182 (477)
T ss_dssp HHTTCTTCCEEE
T ss_pred HhcccCCCcEEe
Confidence 777777776553
No 292
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.69 E-value=4.9e-17 Score=165.93 Aligned_cols=145 Identities=25% Similarity=0.266 Sum_probs=96.5
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCC-CCCCCCCCCcEEeeccCccCCCCCCCcC--CCccee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L 145 (635)
.+++.|+|++|+++ .+|. .+..+++|++|+|++|++++..+ ..+.++++|++|++++|.+++..|..+. ++|++|
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp SCCCEEECCSCSEE-EEEE-EEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred cccCEEECCCCccc-cChh-hcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 45677777777776 4665 46777777777777777764433 4667777777777777777766666555 667777
Q ss_pred ecccccCcc-cCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 146 DLSFNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 146 ~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
+|++|++++ .+|..+..+++|+.|+|++|+|++..|.. .+++|+.|+|++|++++..+..+.++++|..+
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 777777765 46666777777777777777777655543 56677777777777765555556555555544
No 293
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.69 E-value=4.1e-17 Score=163.89 Aligned_cols=143 Identities=21% Similarity=0.212 Sum_probs=121.8
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeec
Q 006696 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~l 147 (635)
.++.|+|++|++++ +++..|+++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|. ++|++|++
T Consensus 29 ~l~~L~ls~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCE-ECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCcccc-cCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 58899999999985 5544799999999999999999977777899999999999999999977777776 79999999
Q ss_pred ccccCcccCCchhhccccCCcEEcCCCcccCC-CCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCC
Q 006696 148 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGS-IPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 213 (635)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~ 213 (635)
++|++++..+..++++++|++|+|++|++++. +|.. .+++|+.|+|++|++++..+..+..+.+|.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 176 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 176 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc
Confidence 99999977777899999999999999999873 4553 789999999999999987777776655544
No 294
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.68 E-value=4.7e-17 Score=175.67 Aligned_cols=151 Identities=23% Similarity=0.314 Sum_probs=132.3
Q ss_pred Ccee--eEecCCC--------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCC-CCCCCCCCCCcEEeec
Q 006696 58 SWVG--INCTQDR--------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGL-PSEITSLPSLRYLYLQ 126 (635)
Q Consensus 58 ~w~g--v~c~~~~--------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~ 126 (635)
.|.+ |.|+... .+++.|+|++|.+++..|. .|+++++|++|+|++|.+.+.+ |..|.++++|++|+|+
T Consensus 9 ~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 9 SVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNET-SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp EEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTT-TTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred EEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChh-HhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 4554 8887533 4689999999999965565 8999999999999999998777 4679999999999999
Q ss_pred cCccCCCCCCCcC--CCcceeecccccCcccCCch--hhccccCCcEEcCCCcccCCCCCC---CCCCCCeEEeecccCc
Q 006696 127 HNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQS--IQNLTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGLK 199 (635)
Q Consensus 127 ~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~~~~---~l~~L~~l~l~~N~l~ 199 (635)
+|++++..|..|. ++|++|+|++|++++.+|.. |.++++|++|+|++|++++..|.. .+++|+.|+|++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 9999988888887 89999999999999866655 999999999999999999887763 7999999999999999
Q ss_pred CCCCcccCCC
Q 006696 200 GSIPSSLQKF 209 (635)
Q Consensus 200 ~~~p~~~~~l 209 (635)
+..|..+.++
T Consensus 168 ~~~~~~l~~l 177 (455)
T 3v47_A 168 SICEEDLLNF 177 (455)
T ss_dssp CCCTTTSGGG
T ss_pred ccChhhhhcc
Confidence 9888888766
No 295
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.68 E-value=1.4e-16 Score=160.08 Aligned_cols=152 Identities=22% Similarity=0.247 Sum_probs=88.6
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.+++ +++..|+++++|++|+|++|++++..|..|.++++|++|++++|++++..+..+. ++|++|+
T Consensus 52 ~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 52 PELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp TTCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred cCCcEEECCCCcCCc-cCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 356666666666663 3333566666666666666666655556666666666666666666654444444 5666666
Q ss_pred cccccCccc-CCchhhccccCCcEEcCCCcccCCCC----------------------------CC-CCCCCCeEEeecc
Q 006696 147 LSFNSFTGN-IPQSIQNLTQLTGLSLQSNNLSGSIP----------------------------NF-DIPKLRHLNLSYN 196 (635)
Q Consensus 147 ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~~----------------------------~~-~l~~L~~l~l~~N 196 (635)
|++|++++. +|..|.++++|+.|+|++|+|++..+ .. ...+|+.|+|++|
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n 210 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTN 210 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSS
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCC
Confidence 666666542 46666666666666666666654332 22 2335666777777
Q ss_pred cCcCCCCcccCCCCCCC---ccCCCCCC
Q 006696 197 GLKGSIPSSLQKFPNSS---FVGNSLLC 221 (635)
Q Consensus 197 ~l~~~~p~~~~~l~~l~---~~~n~~~~ 221 (635)
++++..+..+.++++|. +.+|+..|
T Consensus 211 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 211 QLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred ceeecCHhHhcccccccEEEccCCcccc
Confidence 77655444445554443 33444444
No 296
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=6e-17 Score=149.82 Aligned_cols=132 Identities=26% Similarity=0.255 Sum_probs=114.6
Q ss_pred CeEEEEEeCCCCcc-CcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCccee
Q 006696 69 TRVFGLRLPGIGLV-GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~-g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L 145 (635)
.+++.|+|++|+++ +.+|. .+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+. ++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 56899999999998 88988 689999999999999999965 7899999999999999999987777664 899999
Q ss_pred ecccccCcccC-CchhhccccCCcEEcCCCcccCCCC----CC-CCCCCCeEEeecccCcCCCCc
Q 006696 146 DLSFNSFTGNI-PQSIQNLTQLTGLSLQSNNLSGSIP----NF-DIPKLRHLNLSYNGLKGSIPS 204 (635)
Q Consensus 146 ~ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~----~~-~l~~L~~l~l~~N~l~~~~p~ 204 (635)
+|++|+|++.. +..+..+++|+.|++++|.+++..+ .. .+++|+.|++++|.+. .+|.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 99999999542 2789999999999999999997766 22 7899999999999988 4554
No 297
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=1.9e-16 Score=147.85 Aligned_cols=125 Identities=26% Similarity=0.298 Sum_probs=104.7
Q ss_pred EeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccC
Q 006696 75 RLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSF 152 (635)
Q Consensus 75 ~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l 152 (635)
++++++++ .+|.. + .++|+.|+|++|++++..+..|.++++|++|+|++|++++..+..|. ++|++|+|++|+|
T Consensus 13 ~~~~~~l~-~~p~~-~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 88 (177)
T 2o6r_A 13 RCNSKGLT-SVPTG-I--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL 88 (177)
T ss_dssp ECCSSCCS-SCCTT-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EecCCCCc-cCCCC-C--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCc
Confidence 33456666 57753 3 37899999999999976667789999999999999999966665555 8999999999999
Q ss_pred cccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCC
Q 006696 153 TGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 153 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p 203 (635)
++..+..|..+++|++|+|++|+|++.++.. .+++|+.|+|++|++++..|
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 89 QSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9877778899999999999999999766654 68999999999999997554
No 298
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=2.1e-17 Score=188.02 Aligned_cols=178 Identities=21% Similarity=0.282 Sum_probs=108.9
Q ss_pred CChhHHHHHHHHHHhCCC---CCCCCCCCCCCCCCCceeeEecCCCCeEEEEEeCCCCc------------------cC-
Q 006696 26 DLNSDRQALLDFADAVPH---LRKLNWSSTNPICQSWVGINCTQDRTRVFGLRLPGIGL------------------VG- 83 (635)
Q Consensus 26 ~~~~~~~al~~~~~~~~~---~~~~~w~~~~~~c~~w~gv~c~~~~~~v~~l~l~~~~l------------------~g- 83 (635)
....++.+|+++..++.. .....|.....++.+|.++.++. .+++.|+|.+|++ .+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~ 206 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEANQALLQHKKLSQYSIDED 206 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcchhhHhhcCccCcccccCc
Confidence 445688999999877632 12225655555556898887765 4455555544433 22
Q ss_pred -------cCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcc
Q 006696 84 -------PIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTG 154 (635)
Q Consensus 84 -------~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~ 154 (635)
.++++.+..+.+|+.|+|++|+|. .+|..+.+|++|++|+|++|.|+ .+|..|. ++|++|+|++|+|+
T Consensus 207 ~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 207 DDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 133446888889999999999988 78888888999999999999998 7888776 78999999999998
Q ss_pred cCCchhhccccCCcEEcCCCcccCCCCC-C-CCCCCCeEEeecccCcCCCCcccCCC
Q 006696 155 NIPQSIQNLTQLTGLSLQSNNLSGSIPN-F-DIPKLRHLNLSYNGLKGSIPSSLQKF 209 (635)
Q Consensus 155 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~-~l~~L~~l~l~~N~l~~~~p~~~~~l 209 (635)
.+|..|++|++|++|+|++|.|+ .+|. + .+++|+.|+|++|.|++.+|..+..+
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 78888999999999999999987 4454 3 78889999999999988887766543
No 299
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.67 E-value=6.5e-17 Score=181.19 Aligned_cols=152 Identities=20% Similarity=0.229 Sum_probs=132.4
Q ss_pred eeeEecCC---------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCcc
Q 006696 60 VGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF 130 (635)
Q Consensus 60 ~gv~c~~~---------~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 130 (635)
..|.|.+. ..+++.|+|++|++++..+ ..|+++++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 14 ~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 14 ITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKS-YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp TEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEccCCCcccCCCCCCCCcCEEECCCCCcCEeCh-hhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 35777642 2468999999999995444 4899999999999999999988888999999999999999999
Q ss_pred CCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccC-CCCCC--CCCCCCeEEeecccCcCCCCcc
Q 006696 131 SGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG-SIPNF--DIPKLRHLNLSYNGLKGSIPSS 205 (635)
Q Consensus 131 ~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~--~l~~L~~l~l~~N~l~~~~p~~ 205 (635)
++..|..|. ++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|.. .+++|++|+|++|++++..|..
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~ 172 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhh
Confidence 988898887 899999999999998777899999999999999999986 55654 8999999999999999888887
Q ss_pred cCCCCCC
Q 006696 206 LQKFPNS 212 (635)
Q Consensus 206 ~~~l~~l 212 (635)
+.++.+|
T Consensus 173 ~~~l~~L 179 (606)
T 3vq2_A 173 LQFLREN 179 (606)
T ss_dssp THHHHHC
T ss_pred hhhhhcc
Confidence 7766544
No 300
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.67 E-value=2e-16 Score=163.27 Aligned_cols=142 Identities=20% Similarity=0.249 Sum_probs=118.5
Q ss_pred CCceeeEecCC---------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeecc
Q 006696 57 QSWVGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 127 (635)
Q Consensus 57 ~~w~gv~c~~~---------~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 127 (635)
|.|+.+.|... ...++.|+|++|++++ +++..|+++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCE-eChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 37999999742 2368899999999995 5555899999999999999999988899999999999999999
Q ss_pred CccCCCCCCCcCCCcceeecccccCcccCCchhhccccCCcEEcCCCcccC--CCCCC--CCCCCCeEEeecccCcC
Q 006696 128 NNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG--SIPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 128 N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~--~l~~L~~l~l~~N~l~~ 200 (635)
|+++ .+|..+.++|++|++++|++++..+..|.++++|+.|++++|.+.. ..+.. .+++|+.|++++|.++.
T Consensus 110 n~l~-~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 110 NQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SCCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CcCC-ccChhhcccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 9999 7888888899999999999997777778888888888888888863 33332 56777777777777763
No 301
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.67 E-value=8.6e-17 Score=173.60 Aligned_cols=129 Identities=22% Similarity=0.264 Sum_probs=112.7
Q ss_pred CCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEc
Q 006696 94 DALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSL 171 (635)
Q Consensus 94 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 171 (635)
++|+.|+|++|++++.+|..|.++++|++|+|++|++++..|..|. ++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 6899999999999988899999999999999999999988888887 89999999999999888999999999999999
Q ss_pred CCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCcc---CCCCCCC
Q 006696 172 QSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV---GNSLLCG 222 (635)
Q Consensus 172 ~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~---~n~~~~g 222 (635)
++|+|++..|.. .+++|+.|+|++|++++..+..+.++++|+.+ +|+..|.
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 999999887764 88999999999999997666667777666544 5555544
No 302
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=2.4e-16 Score=149.30 Aligned_cols=123 Identities=30% Similarity=0.381 Sum_probs=109.9
Q ss_pred EEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccc
Q 006696 73 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFN 150 (635)
Q Consensus 73 ~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N 150 (635)
.+++++++++ .+|.+ +. .+|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|. ++|++|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~-~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKG-IP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSC-CC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCC-CC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 5788889988 78873 43 68999999999999 8899999999999999999999987777777 89999999999
Q ss_pred cCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcC
Q 006696 151 SFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 151 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~ 200 (635)
+|++..|..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999888889999999999999999999766653 78999999999999873
No 303
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.66 E-value=2.8e-17 Score=184.90 Aligned_cols=133 Identities=17% Similarity=0.313 Sum_probs=117.5
Q ss_pred CccCcCCcccccCCCCCcEEEeecCCCCCC-----------------CCCCCC--CCCCCcEEeeccCccCCCCCCCcC-
Q 006696 80 GLVGPIPNNTLGKLDALEVLSLRSNVLTGG-----------------LPSEIT--SLPSLRYLYLQHNNFSGKIPSSFS- 139 (635)
Q Consensus 80 ~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~- 139 (635)
+++| ||+ .|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.|.+|..+.
T Consensus 194 ~l~~-ip~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 271 (636)
T 4eco_A 194 NITF-VSK-AVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA 271 (636)
T ss_dssp EEEE-ECG-GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT
T ss_pred CCcc-CCH-HHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc
Confidence 4555 887 799999999999999999986 999999 999999999999999999999887
Q ss_pred -CCcceeeccccc-Ccc-cCCchhhcc------ccCCcEEcCCCcccCCCCC--C--CCCCCCeEEeecccCcCCCCccc
Q 006696 140 -PQLVVLDLSFNS-FTG-NIPQSIQNL------TQLTGLSLQSNNLSGSIPN--F--DIPKLRHLNLSYNGLKGSIPSSL 206 (635)
Q Consensus 140 -~~L~~L~ls~N~-l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~~~--~--~l~~L~~l~l~~N~l~~~~p~~~ 206 (635)
++|++|+|++|+ |+| .+|..++++ ++|+.|+|++|+++ .+|. . .+++|+.|+|++|+++|.+| .+
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~ 349 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF 349 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh
Confidence 899999999998 998 899999887 99999999999999 6776 3 88999999999999998898 77
Q ss_pred CCCCCCCccC
Q 006696 207 QKFPNSSFVG 216 (635)
Q Consensus 207 ~~l~~l~~~~ 216 (635)
.++++|..+.
T Consensus 350 ~~l~~L~~L~ 359 (636)
T 4eco_A 350 GSEIKLASLN 359 (636)
T ss_dssp EEEEEESEEE
T ss_pred CCCCCCCEEE
Confidence 7776665543
No 304
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.66 E-value=3.7e-16 Score=161.34 Aligned_cols=157 Identities=21% Similarity=0.284 Sum_probs=127.8
Q ss_pred CCceeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeecc
Q 006696 57 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 127 (635)
Q Consensus 57 ~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 127 (635)
|.|..+.|.... .+++.|+|++|++++ +++..|+++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISE-LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCc-cCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 379999997532 368999999999995 5544899999999999999999988899999999999999999
Q ss_pred CccCCCCCCCcCCCcceeecccccCcccCCchhhccccCCcEEcCCCcccC--CCCCC--CCCCCCeEEeecccCcCCCC
Q 006696 128 NNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG--SIPNF--DIPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 128 N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~--~l~~L~~l~l~~N~l~~~~p 203 (635)
|+++ .+|..+.++|++|+|++|+|++..+..|.++++|+.|++++|.++. ..+.. .+ +|+.|++++|++++ +|
T Consensus 112 n~l~-~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~ 188 (332)
T 2ft3_A 112 NHLV-EIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IP 188 (332)
T ss_dssp SCCC-SCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CC
T ss_pred CcCC-ccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cC
Confidence 9999 7888888999999999999997777789999999999999999963 44443 34 77888888888775 44
Q ss_pred ccc-CCCCCCCccCC
Q 006696 204 SSL-QKFPNSSFVGN 217 (635)
Q Consensus 204 ~~~-~~l~~l~~~~n 217 (635)
..+ .++..|...+|
T Consensus 189 ~~~~~~L~~L~l~~n 203 (332)
T 2ft3_A 189 KDLPETLNELHLDHN 203 (332)
T ss_dssp SSSCSSCSCCBCCSS
T ss_pred ccccCCCCEEECCCC
Confidence 333 34444544444
No 305
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.66 E-value=1.2e-16 Score=179.03 Aligned_cols=154 Identities=19% Similarity=0.108 Sum_probs=136.3
Q ss_pred ceeeEecCC---------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCc
Q 006696 59 WVGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN 129 (635)
Q Consensus 59 w~gv~c~~~---------~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 129 (635)
+..+.|... ...++.|+|++|.+++..|. .|+++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNT-TFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTT-TSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChh-HhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 556788642 24689999999999965454 89999999999999999998889999999999999999999
Q ss_pred cCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCC-CCCC-CCCCCCeEEeecccCcCCCCcc
Q 006696 130 FSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGS-IPNF-DIPKLRHLNLSYNGLKGSIPSS 205 (635)
Q Consensus 130 l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~-~l~~L~~l~l~~N~l~~~~p~~ 205 (635)
+++..|..|. ++|++|+|++|+|++..|..|+++++|++|+|++|++++. +|.. .+++|+.|+|++|++++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 9988888887 8999999999999987788999999999999999999974 3444 7999999999999999888888
Q ss_pred cCCCCCCC
Q 006696 206 LQKFPNSS 213 (635)
Q Consensus 206 ~~~l~~l~ 213 (635)
+.++++|.
T Consensus 173 ~~~l~~L~ 180 (606)
T 3t6q_A 173 MSSLQQAT 180 (606)
T ss_dssp HHTTTTCC
T ss_pred hhhhcccc
Confidence 88888776
No 306
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.65 E-value=7.4e-17 Score=158.36 Aligned_cols=133 Identities=17% Similarity=0.230 Sum_probs=110.1
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCC-CCCCCCCCCCCCCCCcEEeecc-CccCCCCCCCcC--CCcce
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNV-LTGGLPSEITSLPSLRYLYLQH-NNFSGKIPSSFS--PQLVV 144 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~--~~L~~ 144 (635)
..++.|+|++|+++ .+|+..|+++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|. ++|++
T Consensus 31 ~~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 46889999999998 5666689999999999999997 8855556899999999999998 999965556665 78999
Q ss_pred eecccccCcccCCchhhccccCC---cEEcCCC-cccCCCCCC--CCCCCC-eEEeecccCcCCCCcc
Q 006696 145 LDLSFNSFTGNIPQSIQNLTQLT---GLSLQSN-NLSGSIPNF--DIPKLR-HLNLSYNGLKGSIPSS 205 (635)
Q Consensus 145 L~ls~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~~~~--~l~~L~-~l~l~~N~l~~~~p~~ 205 (635)
|+|++|+|++ +|. |..+++|+ .|++++| ++++..+.. .+++|+ .|++++|+++ .+|..
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~ 174 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY 174 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh
Confidence 9999999995 666 88888888 9999999 888766653 788899 9999999998 45543
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.65 E-value=4.5e-16 Score=167.30 Aligned_cols=154 Identities=27% Similarity=0.272 Sum_probs=112.7
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCC-------------------------CCCCCcEE
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEIT-------------------------SLPSLRYL 123 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-------------------------~l~~L~~L 123 (635)
.+++.|+|++|+++ .+|++.|..+++|++|+|++|+|+...+..|. ++++|++|
T Consensus 112 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 112 ANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp SSCCEEECCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred ccCCEEECCCCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 56888899998888 56665788888888888888888754443444 45555555
Q ss_pred eeccCccCCCCCCCcC-CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcC
Q 006696 124 YLQHNNFSGKIPSSFS-PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 124 ~l~~N~l~~~~p~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~ 200 (635)
+|++|+++ .+|.... ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+|++
T Consensus 191 ~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 191 NLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp ECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred cCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc
Confidence 55555555 3343111 67888888888888877888888888888888888888776654 78899999999999997
Q ss_pred CCCcccCCCCCC---CccCCCCCCCCC
Q 006696 201 SIPSSLQKFPNS---SFVGNSLLCGPP 224 (635)
Q Consensus 201 ~~p~~~~~l~~l---~~~~n~~~~g~~ 224 (635)
..+..|..+++| ...+|+..|.+.
T Consensus 270 ~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 270 LPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred cChhHhccccCCCEEEcCCCCccCCCC
Confidence 666666666655 455777777653
No 308
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.65 E-value=2e-16 Score=150.37 Aligned_cols=140 Identities=19% Similarity=0.367 Sum_probs=118.9
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|++++|+++ .+| .+..+++|++|+|++|.++ .+ ..+.++++|++|+|++|++++..|..+. ++|++|+
T Consensus 44 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HTCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred CCccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 36889999999998 777 3899999999999999776 33 4799999999999999999987788877 8999999
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCc-ccCCCCCC-CCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNN-LSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~-~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
|++|++++..|..+..+++|+.|+|++|. ++ .+|.. .+++|+.|++++|++++ ++ .+.++++|..++
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~ 187 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLY 187 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEE
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEE
Confidence 99999998889999999999999999998 65 44544 88999999999999986 44 666666666553
No 309
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.65 E-value=1.6e-16 Score=178.07 Aligned_cols=145 Identities=24% Similarity=0.215 Sum_probs=83.3
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCC-CCCCCCCCCcEEeeccCccCCCCCCCcC--CCccee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L 145 (635)
.+++.|+|++|.++ .+|. .+..+++|+.|+|++|++++..| ..+.++++|++|++++|++++.+|..+. ++|++|
T Consensus 376 ~~L~~L~L~~n~l~-~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 453 (606)
T 3vq2_A 376 NSLRHLDLSFNGAI-IMSA-NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTL 453 (606)
T ss_dssp SCCCEEECCSCSEE-EECC-CCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CcccEeECCCCccc-cchh-hccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEE
Confidence 34566666666665 3453 56666666666666666665555 4556666666666666666655555554 556666
Q ss_pred ecccccCcc-cCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 146 DLSFNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 146 ~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
+|++|++++ .+|..|+.+++|+.|+|++|++++.+|.. .+++|+.|+|++|++++..|..+.++++|..+
T Consensus 454 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 526 (606)
T 3vq2_A 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL 526 (606)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEE
T ss_pred ECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEE
Confidence 666666655 24555556666666666666665554442 55556666666666655555555555544433
No 310
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.64 E-value=2.8e-16 Score=182.62 Aligned_cols=136 Identities=28% Similarity=0.303 Sum_probs=118.2
Q ss_pred ccCCCCCcEEEeecCCCCCCCCC-CCCCCCCCcEEeeccCccCC-----CCCCCcC--CCcceeecccccCcccCCchhh
Q 006696 90 LGKLDALEVLSLRSNVLTGGLPS-EITSLPSLRYLYLQHNNFSG-----KIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ 161 (635)
Q Consensus 90 ~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~-----~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~ 161 (635)
++++++|+.|+|++|++++..+. .+..+++|+.|+|++|.+++ ..|..|. ++|++|+|++|+|++..|..|.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 45889999999999999965443 46778999999999999973 3344454 7899999999999999999999
Q ss_pred ccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCcccCCCCCCCccCCCCCCCCCC
Q 006696 162 NLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVGNSLLCGPPL 225 (635)
Q Consensus 162 ~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~n~~~~g~~l 225 (635)
++++|+.|+|++|+|++.++....++|+.|+|++|+|++..|..+.++..+.+.+|+..|.++.
T Consensus 502 ~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 502 HLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred chhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 9999999999999999877776558999999999999999999999999999999999986653
No 311
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.64 E-value=4.9e-16 Score=174.62 Aligned_cols=152 Identities=19% Similarity=0.196 Sum_probs=125.4
Q ss_pred CceeeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCC
Q 006696 58 SWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSS 137 (635)
Q Consensus 58 ~w~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 137 (635)
.|....|..... ..+-++.+|+ .+|+ .+- +++++|||++|+|++..|.+|.++++|++|+|++|+|++..|..
T Consensus 23 ~~~~c~~~~~~~---~~~c~~~~l~-~vP~-~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~ 95 (635)
T 4g8a_A 23 SWEPCVEVVPNI---TYQCMELNFY-KIPD-NLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGA 95 (635)
T ss_dssp --CCSEEEETTT---EEECTTSCCS-SCCS-SSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTT
T ss_pred CCCCccccCCCC---EEECCCCCcC-ccCC-CCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhH
Confidence 366656653222 3467888898 7887 342 58999999999999766788999999999999999999777777
Q ss_pred cC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcC-CCCcccCCCCCC
Q 006696 138 FS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG-SIPSSLQKFPNS 212 (635)
Q Consensus 138 ~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~-~~p~~~~~l~~l 212 (635)
|. ++|++|+|++|+|++..+..|.+|++|++|+|++|+|++..+.. .+++|+.|+|++|.+++ .+|..+.++++|
T Consensus 96 f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L 175 (635)
T 4g8a_A 96 YQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNL 175 (635)
T ss_dssp TTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTC
T ss_pred hcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhh
Confidence 77 89999999999999777788999999999999999999876653 89999999999999976 457778888777
Q ss_pred CccC
Q 006696 213 SFVG 216 (635)
Q Consensus 213 ~~~~ 216 (635)
+.++
T Consensus 176 ~~L~ 179 (635)
T 4g8a_A 176 EHLD 179 (635)
T ss_dssp CEEE
T ss_pred hhhc
Confidence 6653
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.64 E-value=6.7e-16 Score=166.52 Aligned_cols=154 Identities=25% Similarity=0.235 Sum_probs=117.4
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCC-------------------------CCCCCCCcEE
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSE-------------------------ITSLPSLRYL 123 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~-------------------------~~~l~~L~~L 123 (635)
.+++.|+|++|.++ .+|+..|+++++|++|+|++|+|+...+.. |.++++|++|
T Consensus 123 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 201 (452)
T 3zyi_A 123 ASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYL 201 (452)
T ss_dssp TTCCEEECCSSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEE
T ss_pred ccCCEEECCCCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEE
Confidence 46888999999988 566657888999999999988888443334 4455566666
Q ss_pred eeccCccCCCCCCCcC-CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcC
Q 006696 124 YLQHNNFSGKIPSSFS-PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 124 ~l~~N~l~~~~p~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~ 200 (635)
+|++|++++ +|.-.. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+|++
T Consensus 202 ~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 280 (452)
T 3zyi_A 202 NLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280 (452)
T ss_dssp ECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred ECCCCcccc-cccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc
Confidence 666666663 332211 68889999999999888899999999999999999999877764 78999999999999997
Q ss_pred CCCcccCCCCCC---CccCCCCCCCCC
Q 006696 201 SIPSSLQKFPNS---SFVGNSLLCGPP 224 (635)
Q Consensus 201 ~~p~~~~~l~~l---~~~~n~~~~g~~ 224 (635)
..+..+..+++| .+.+|+..|.+.
T Consensus 281 ~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 281 LPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred cChHHhccccCCCEEEccCCCcCCCCC
Confidence 777666666655 455788777654
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.64 E-value=6.6e-17 Score=165.49 Aligned_cols=132 Identities=23% Similarity=0.290 Sum_probs=70.1
Q ss_pred eEEEEEeCCCCccCcCCcccc-cCCCCCcEEEeecCCCCCCCCCCCCCC-----CCCcEEeeccCccCCCCCCCcC--CC
Q 006696 70 RVFGLRLPGIGLVGPIPNNTL-GKLDALEVLSLRSNVLTGGLPSEITSL-----PSLRYLYLQHNNFSGKIPSSFS--PQ 141 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~--~~ 141 (635)
+++.|+|++|+++|.+|...+ +.+++|++|+|++|++++. |..+.++ ++|++|+|++|++++..|..|. ++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 455566666666555555221 5556666666666666544 5555554 5566666666666555445554 55
Q ss_pred cceeecccccCccc--CCchh--hccccCCcEEcCCCcccCCC--C-CC--CCCCCCeEEeecccCcCCC
Q 006696 142 LVVLDLSFNSFTGN--IPQSI--QNLTQLTGLSLQSNNLSGSI--P-NF--DIPKLRHLNLSYNGLKGSI 202 (635)
Q Consensus 142 L~~L~ls~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~~~--~-~~--~l~~L~~l~l~~N~l~~~~ 202 (635)
|++|+|++|++.+. +|..+ ..+++|++|+|++|+|++.. + .. .+++|+.|+|++|++++..
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAA 244 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCccc
Confidence 66666666655543 22233 55555555555555555211 1 11 4455566666666655544
No 314
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.64 E-value=3.1e-16 Score=182.36 Aligned_cols=149 Identities=21% Similarity=0.235 Sum_probs=128.1
Q ss_pred CceeeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCC-CCCCCCCCCCcEEeeccCccCCCCCC
Q 006696 58 SWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGL-PSEITSLPSLRYLYLQHNNFSGKIPS 136 (635)
Q Consensus 58 ~w~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~ 136 (635)
+|+.|.+ ...+++.|+|++|.+++..|. .|+++++|++|+|++|.+.+.+ |..|.+|++|++|+|++|.+++..|.
T Consensus 15 ~L~~vP~--lp~~l~~LdLs~N~i~~i~~~-~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 15 NLTQVPQ--VLNTTERLLLSFNYIRTVTAS-SFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CSSCCCS--SCTTCCEEEEESCCCCEECSS-SCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCC--CCCCcCEEECCCCcCCccChh-HCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 5777766 346899999999999965555 8999999999999999777677 78899999999999999999988898
Q ss_pred CcC--CCcceeecccccCcccCCch--hhccccCCcEEcCCCcccCCCCC--C-CCCCCCeEEeecccCcCCCCcccCCC
Q 006696 137 SFS--PQLVVLDLSFNSFTGNIPQS--IQNLTQLTGLSLQSNNLSGSIPN--F-DIPKLRHLNLSYNGLKGSIPSSLQKF 209 (635)
Q Consensus 137 ~~~--~~L~~L~ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~~~--~-~l~~L~~l~l~~N~l~~~~p~~~~~l 209 (635)
.|. ++|++|+|++|++++.+|.. |+++++|+.|+|++|.+++..+. . .+++|+.|+|++|.+++..|..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 887 89999999999999877765 99999999999999999987653 2 89999999999999998888777544
No 315
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=1.4e-16 Score=144.08 Aligned_cols=124 Identities=26% Similarity=0.273 Sum_probs=95.9
Q ss_pred CeEEEEEeCCCCcc-CcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCccee
Q 006696 69 TRVFGLRLPGIGLV-GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~-g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L 145 (635)
.+++.|++++|+++ +.+|. .++.+++|++|+|++|++++. ..+.++++|++|+|++|++++.+|..+. ++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 46778888888887 77887 678888888888888888855 6788888888888888888876776654 778888
Q ss_pred ecccccCccc-CCchhhccccCCcEEcCCCcccCCCC---C-C-CCCCCCeEEeec
Q 006696 146 DLSFNSFTGN-IPQSIQNLTQLTGLSLQSNNLSGSIP---N-F-DIPKLRHLNLSY 195 (635)
Q Consensus 146 ~ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~~---~-~-~l~~L~~l~l~~ 195 (635)
+|++|+|++. .+..+..+++|+.|++++|++++..+ . . .+++|+.||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888888853 34778888888888888888886655 1 2 677788887753
No 316
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=1.2e-16 Score=183.78 Aligned_cols=145 Identities=22% Similarity=0.364 Sum_probs=131.4
Q ss_pred CCeEEEEEeCCCCccC-----------------cCCccccc--CCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccC
Q 006696 68 RTRVFGLRLPGIGLVG-----------------PIPNNTLG--KLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 68 ~~~v~~l~l~~~~l~g-----------------~lp~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (635)
-.+++.|+|++|.++| .+|+ .++ ++++|++|+|++|++.+.+|..|++|++|+.|+|++|
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~-~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE-ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCCh-hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 3579999999999998 4998 677 9999999999999999999999999999999999999
Q ss_pred c-cCC-CCCCCcC---------CCcceeecccccCcccCCc--hhhccccCCcEEcCCCcccCCCCCC-CCCCCCeEEee
Q 006696 129 N-FSG-KIPSSFS---------PQLVVLDLSFNSFTGNIPQ--SIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLS 194 (635)
Q Consensus 129 ~-l~~-~~p~~~~---------~~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~-~l~~L~~l~l~ 194 (635)
+ ++| .+|..+. ++|++|+|++|+|+ .+|. .|+++++|+.|+|++|+|+ .+|.. .+++|+.|+|+
T Consensus 526 ~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLD 603 (876)
T ss_dssp TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECC
T ss_pred CCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECc
Confidence 8 998 8887665 38999999999999 8998 9999999999999999999 77755 88999999999
Q ss_pred cccCcCCCCcccCCCCC-CCccC
Q 006696 195 YNGLKGSIPSSLQKFPN-SSFVG 216 (635)
Q Consensus 195 ~N~l~~~~p~~~~~l~~-l~~~~ 216 (635)
+|+++ .+|..+.++++ |..++
T Consensus 604 ~N~l~-~lp~~l~~l~~~L~~L~ 625 (876)
T 4ecn_A 604 YNQIE-EIPEDFCAFTDQVEGLG 625 (876)
T ss_dssp SSCCS-CCCTTSCEECTTCCEEE
T ss_pred CCccc-cchHHHhhccccCCEEE
Confidence 99999 89988888777 76553
No 317
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.63 E-value=9e-16 Score=164.90 Aligned_cols=156 Identities=26% Similarity=0.266 Sum_probs=102.6
Q ss_pred CceeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccC
Q 006696 58 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 58 ~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (635)
.|..|.|.... ..++.|+|++|++++ +++..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQI-IKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCE-ECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCe-eCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 46788886421 357788888888884 44447888888888888888888666677888888888888888
Q ss_pred ccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCC-------------------------CcccCCCC
Q 006696 129 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQS-------------------------NNLSGSIP 181 (635)
Q Consensus 129 ~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~-------------------------N~l~~~~~ 181 (635)
++++..+..|. ++|++|+|++|+|++..+..|.++++|+.|+|++ |+|+. +|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~ 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc
Confidence 88855554555 6788888888887755554555555555555555 44442 22
Q ss_pred CC-CCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 182 NF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 182 ~~-~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
.. .+++|+.|+|++|++++..|..|.++++|..+
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 236 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 236 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEE
Confidence 22 44555555555555555555555555544433
No 318
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.63 E-value=5e-16 Score=170.70 Aligned_cols=150 Identities=25% Similarity=0.370 Sum_probs=123.0
Q ss_pred CCCCCCCCCC----Cceee-EecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcE
Q 006696 48 NWSSTNPICQ----SWVGI-NCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRY 122 (635)
Q Consensus 48 ~w~~~~~~c~----~w~gv-~c~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 122 (635)
+|..+..+|. .|.|+ .|.. .+++.|+|++|+|++ +|.. + +++|++|+|++|+|+ .+| ..+++|++
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~-l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDN-L--PPQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSC-C--CTTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHh-H--cCCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 5766666773 49999 7875 579999999999996 8884 4 389999999999999 788 55899999
Q ss_pred EeeccCccCCCCCCCcCCCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCC
Q 006696 123 LYLQHNNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSI 202 (635)
Q Consensus 123 L~l~~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~ 202 (635)
|+|++|+|++ +|. +..+|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +
T Consensus 105 L~Ls~N~l~~-ip~-l~~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPASLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE-LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp EECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-C
T ss_pred EEccCCCCCC-cch-hhcCCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-cCCCcCEEECCCCCCCC-c
Confidence 9999999997 888 77899999999999996 676 68999999999999997 555 68899999999999996 6
Q ss_pred CcccC-CCCCCCccCC
Q 006696 203 PSSLQ-KFPNSSFVGN 217 (635)
Q Consensus 203 p~~~~-~l~~l~~~~n 217 (635)
|. |. ++..|...+|
T Consensus 176 p~-l~~~L~~L~Ls~N 190 (571)
T 3cvr_A 176 PE-LPESLEALDVSTN 190 (571)
T ss_dssp CC-CCTTCCEEECCSS
T ss_pred ch-hhCCCCEEECcCC
Confidence 66 54 3333333344
No 319
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.62 E-value=8.6e-16 Score=158.46 Aligned_cols=144 Identities=24% Similarity=0.344 Sum_probs=121.8
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCC--CCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceeec
Q 006696 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG--GLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l 147 (635)
+++.|++++|.++ .+++..+.++++|++|+|++|.++. ..|..+.++++|++|++++|+++ .+|..+.++|++|+|
T Consensus 122 ~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~L~~L~l 199 (330)
T 1xku_A 122 TLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTELHL 199 (330)
T ss_dssp TCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCCTTCSEEEC
T ss_pred cccEEECCCCccc-ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCccccccCCEEEC
Confidence 4566666666666 3444468889999999999998863 67788899999999999999998 578877799999999
Q ss_pred ccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 148 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
++|++++..|..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+++ .+|..+..+++|..++
T Consensus 200 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 269 (330)
T 1xku_A 200 DGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269 (330)
T ss_dssp TTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEE
Confidence 999999888999999999999999999999877654 7899999999999999 7888888888777654
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.62 E-value=1.5e-16 Score=173.01 Aligned_cols=146 Identities=20% Similarity=0.174 Sum_probs=89.1
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC---CCccee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~---~~L~~L 145 (635)
..++.|+|++|.+++..+. .+++|+.|+|++|+|++..|..++++++|++|+|++|.+++.+|..+. ++|++|
T Consensus 99 ~~L~~L~L~~N~l~~~~~~----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L 174 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC----CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECcCCcCCCCCcc----ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEE
Confidence 3456666666666643222 346667777777777766666666677777777777777766666554 567777
Q ss_pred ecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC-CCCCCCeEEeecccCcCCCCcccCCCCCCC---ccCCCCCC
Q 006696 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLC 221 (635)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~---~~~n~~~~ 221 (635)
+|++|.|++..+ +..+++|+.|+|++|.|++.+|.. .+++|+.|+|++|.|++ +|..+..+++|. +.+|+..|
T Consensus 175 ~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 175 NLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp ECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCH
T ss_pred ecCCCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcC
Confidence 777777765422 334666777777777776655544 56667777777777764 555555444433 33444444
No 321
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.62 E-value=2e-15 Score=157.70 Aligned_cols=148 Identities=25% Similarity=0.244 Sum_probs=122.8
Q ss_pred eeeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCC-CCCCCcEEeeccCccCCCCCCCc
Q 006696 60 VGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEIT-SLPSLRYLYLQHNNFSGKIPSSF 138 (635)
Q Consensus 60 ~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~ 138 (635)
.+..|.. ..+++++++|+ .+|. .+. ..|+.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|..|
T Consensus 14 ~~C~C~~-----~~l~c~~~~l~-~iP~-~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~ 84 (361)
T 2xot_A 14 ANCLCAS-----NILSCSKQQLP-NVPQ-SLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAF 84 (361)
T ss_dssp TTCEEET-----TEEECCSSCCS-SCCS-SCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCEECC-----CEEEeCCCCcC-ccCc-cCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhc
Confidence 4568864 36899999999 6887 343 4689999999999977777787 99999999999999997777777
Q ss_pred C--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCccc---CCCCC
Q 006696 139 S--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSL---QKFPN 211 (635)
Q Consensus 139 ~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~---~~l~~ 211 (635)
. ++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++..+..| .++++
T Consensus 85 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~ 164 (361)
T 2xot_A 85 VPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPK 164 (361)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTT
T ss_pred cCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCc
Confidence 6 89999999999999888888999999999999999999877664 89999999999999996444444 45666
Q ss_pred CCccC
Q 006696 212 SSFVG 216 (635)
Q Consensus 212 l~~~~ 216 (635)
|..++
T Consensus 165 L~~L~ 169 (361)
T 2xot_A 165 LMLLD 169 (361)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 65543
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.62 E-value=3.6e-16 Score=170.02 Aligned_cols=97 Identities=21% Similarity=0.216 Sum_probs=57.8
Q ss_pred CCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhh-ccccCCcEEcCCCcccCCCCCCCCCCCCeEEee
Q 006696 118 PSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ-NLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLS 194 (635)
Q Consensus 118 ~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~ 194 (635)
++|+.|+|++|.+++..|..+. ++|++|+|++|+|++.+|..+. .+++|+.|+|++|.|++..+...+++|+.|+|+
T Consensus 120 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls 199 (487)
T 3oja_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLS 199 (487)
T ss_dssp SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECC
T ss_pred CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECC
Confidence 3444444444555544444444 5666666666666666666654 566666666666666665444466777777777
Q ss_pred cccCcCCCCcccCCCCCCCcc
Q 006696 195 YNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 195 ~N~l~~~~p~~~~~l~~l~~~ 215 (635)
+|+|++ +|..+..+++|..+
T Consensus 200 ~N~l~~-~~~~~~~l~~L~~L 219 (487)
T 3oja_A 200 SNKLAF-MGPEFQSAAGVTWI 219 (487)
T ss_dssp SSCCCE-ECGGGGGGTTCSEE
T ss_pred CCCCCC-CCHhHcCCCCccEE
Confidence 777775 33346555555544
No 323
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.62 E-value=4e-16 Score=159.51 Aligned_cols=148 Identities=22% Similarity=0.227 Sum_probs=106.4
Q ss_pred CeEEEEEeCCCCccCcCCc---ccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCC--CCCCc--C--
Q 006696 69 TRVFGLRLPGIGLVGPIPN---NTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGK--IPSSF--S-- 139 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~---~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~--~-- 139 (635)
.+++.|+|++|.+++..+. ..+..+++|++|+|++|++++..|..|.++++|++|+|++|++.+. ++... .
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 5688888888888876552 2456788899999999999877778888889999999999987652 22221 2
Q ss_pred CCcceeecccccCcccCCc----hhhccccCCcEEcCCCcccCCCCCC--C---CCCCCeEEeecccCcCCCCcccC-CC
Q 006696 140 PQLVVLDLSFNSFTGNIPQ----SIQNLTQLTGLSLQSNNLSGSIPNF--D---IPKLRHLNLSYNGLKGSIPSSLQ-KF 209 (635)
Q Consensus 140 ~~L~~L~ls~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~~~~--~---l~~L~~l~l~~N~l~~~~p~~~~-~l 209 (635)
++|++|+|++|+|+ .+|. .++.+++|++|+|++|+|++..|.. . +++|+.|+|++|+|+ .+|..+. ++
T Consensus 197 ~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L 274 (310)
T 4glp_A 197 PAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKL 274 (310)
T ss_dssp CCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCC
T ss_pred CCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCC
Confidence 67888888888887 3333 2577788888888888888875532 3 368888888888888 5666553 44
Q ss_pred CCCCccCCC
Q 006696 210 PNSSFVGNS 218 (635)
Q Consensus 210 ~~l~~~~n~ 218 (635)
..|...+|.
T Consensus 275 ~~L~Ls~N~ 283 (310)
T 4glp_A 275 RVLDLSSNR 283 (310)
T ss_dssp SCEECCSCC
T ss_pred CEEECCCCc
Confidence 444444443
No 324
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.62 E-value=6.4e-16 Score=167.87 Aligned_cols=148 Identities=20% Similarity=0.148 Sum_probs=131.4
Q ss_pred CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCccee
Q 006696 68 RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 68 ~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L 145 (635)
-.+++.|+|++|.+++..|. .|+++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|. ++|++|
T Consensus 55 l~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 133 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPG-AFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSL 133 (477)
T ss_dssp CTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccCEeChh-hhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEE
Confidence 35799999999999965565 899999999999999999965556789999999999999999988888887 899999
Q ss_pred ecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
+|++|++++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|.+++..+..|.++++|..++
T Consensus 134 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 206 (477)
T 2id5_A 134 EVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 206 (477)
T ss_dssp EECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEE
T ss_pred ECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceee
Confidence 99999999988999999999999999999999765542 889999999999999988888888888877664
No 325
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=1.1e-15 Score=158.06 Aligned_cols=133 Identities=12% Similarity=0.129 Sum_probs=95.6
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---------------HHH--------HHHHHHHHHhhCCCCceece
Q 006696 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---------------KRD--------FEQQMEIVGRVGQHPNVVPL 399 (635)
Q Consensus 343 ~~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---------------~~~--------~~~e~~~l~~l~~h~niv~l 399 (635)
.+.||+|+||.||+|...+|+.||||+++..... ... ...|...+.++ .+.++. .
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL-~~~gv~-v 177 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL-YEEGFP-V 177 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH-HHTTCS-C
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH-HhcCCC-C
Confidence 5689999999999999989999999987532110 111 23455566666 333322 1
Q ss_pred eEEEEeCCceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCC
Q 006696 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL 479 (635)
Q Consensus 400 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~ 479 (635)
...+.. ...++||||++++.|.++... .....++.|++.+|.|||+.| ||||||||.|||+++++
T Consensus 178 p~p~~~-~~~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 178 PEPIAQ-SRHTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCEEEE-ETTEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEE
T ss_pred Ceeeec-cCceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCC
Confidence 111111 234799999999888766531 123568899999999999998 99999999999999877
Q ss_pred C----------eEEeccCCCCCC
Q 006696 480 D----------GCISDFGLTPLM 492 (635)
Q Consensus 480 ~----------~ki~DfGla~~~ 492 (635)
. +.|+||+-+...
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEET
T ss_pred CcccccccccceEEEEeCCcccC
Confidence 3 889999976543
No 326
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.61 E-value=1.1e-15 Score=157.86 Aligned_cols=143 Identities=22% Similarity=0.341 Sum_probs=104.8
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCC--CCCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceeec
Q 006696 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLT--GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l 147 (635)
+++.|+|++|.++ .+|+..|+++++|+.|+|++|.++ +..|..+..+ +|++|++++|+++ .+|..+.++|++|+|
T Consensus 124 ~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~l~~~~~~~L~~L~l 200 (332)
T 2ft3_A 124 SLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT-GIPKDLPETLNELHL 200 (332)
T ss_dssp TCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-SCCSSSCSSCSCCBC
T ss_pred cCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-ccCccccCCCCEEEC
Confidence 3455555555555 344445666666666666666664 3455566666 6666666667666 366666678999999
Q ss_pred ccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 148 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
++|++++..|..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+++ .+|..+.++++|..++
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 270 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVY 270 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEE
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEE
Confidence 999999877788999999999999999999877643 7889999999999998 7888888877776654
No 327
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.61 E-value=1.9e-15 Score=167.67 Aligned_cols=152 Identities=20% Similarity=0.297 Sum_probs=122.1
Q ss_pred CCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCC--CCCCCCCCCCCCcEEeeccCccCCCCCCCcC---CC
Q 006696 67 DRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG--GLPSEITSLPSLRYLYLQHNNFSGKIPSSFS---PQ 141 (635)
Q Consensus 67 ~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~---~~ 141 (635)
...+++.|+|++|.+++.+|. .++++++|++|+|++|++++ .+|..+.++++|++|+|++|++++.+|.... ++
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred CCCCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 345788999999999987887 79999999999999999996 3456789999999999999999986776533 78
Q ss_pred cceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC-CCCCCCeEEeecccCcCCCCcc-cCCCCCCCc---cC
Q 006696 142 LVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSS-LQKFPNSSF---VG 216 (635)
Q Consensus 142 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~l~~L~~l~l~~N~l~~~~p~~-~~~l~~l~~---~~ 216 (635)
|++|+|++|+|++.+|..+. ++|+.|+|++|+|+..++.. .+++|+.|+|++|+++ .+|.. +..+++|.. .+
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCS
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecC
Confidence 99999999999888777664 78999999999999443333 7899999999999999 46655 776666554 45
Q ss_pred CCCCCC
Q 006696 217 NSLLCG 222 (635)
Q Consensus 217 n~~~~g 222 (635)
|+..|.
T Consensus 507 N~~~c~ 512 (562)
T 3a79_B 507 NPWDCT 512 (562)
T ss_dssp CCBCCC
T ss_pred CCcCCC
Confidence 655543
No 328
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.61 E-value=4.5e-16 Score=174.31 Aligned_cols=145 Identities=23% Similarity=0.241 Sum_probs=118.4
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCC-CCCCCCCcEEeeccCccCCCCCCCcC--CCccee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSE-ITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L 145 (635)
.+++.|+|++|.+.+..|. .++.+++|+.|+|++|++++..|.. +.++++|++|+|++|.+++..|..+. ++|++|
T Consensus 376 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTE-AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp TTCCEEECCSCSCEEECTT-TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCCcCCHH-HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 5788899999998866555 7888999999999999988776644 88889999999999999887787776 788899
Q ss_pred ecccccCccc---CCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 146 DLSFNSFTGN---IPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 146 ~ls~N~l~~~---~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
+|++|++++. .+..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|++++..|..+.+++.| .+
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L 528 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YL 528 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EE
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EE
Confidence 9999988762 3356888888888888888888777654 78888888888888888888888887776 44
No 329
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.61 E-value=6.9e-16 Score=175.26 Aligned_cols=137 Identities=26% Similarity=0.295 Sum_probs=118.2
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|++++ +|+..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|. ++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 478999999999985 5655799999999999999999988888899999999999999999955444566 8899999
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCccc
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSL 206 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~ 206 (635)
|++|++++..|..|+++++|++|+|++|.+++.+|.. .+++|+.|+|++|.+++..+..+
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 165 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEEL 165 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHH
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHh
Confidence 9999999777788999999999999999999877764 78899999999999987766654
No 330
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.61 E-value=1.7e-15 Score=150.93 Aligned_cols=137 Identities=20% Similarity=0.242 Sum_probs=114.6
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceeecc
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~ls 148 (635)
.+++.|++++|+++ .+| .++.+++|++|+|++|+|++..| +.++++|++|+|++|++++ +|....++|++|+|+
T Consensus 41 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~~~L~~L~L~ 114 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPSACLSRLFLD 114 (263)
T ss_dssp TTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCCSSCCEEECC
T ss_pred CcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccccCcccEEEcc
Confidence 46889999999998 677 48999999999999999996544 9999999999999999996 444333899999999
Q ss_pred cccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
+|+|++ ++ .+.++++|+.|+|++|+|++..+-..+++|+.|+|++|++++. ..+.++++|..+
T Consensus 115 ~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L 177 (263)
T 1xeu_A 115 NNELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWI 177 (263)
T ss_dssp SSCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEE
T ss_pred CCccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch--HHhccCCCCCEE
Confidence 999996 43 6999999999999999999764333889999999999999975 567777776654
No 331
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.61 E-value=1.3e-15 Score=170.14 Aligned_cols=109 Identities=24% Similarity=0.261 Sum_probs=89.7
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.+++..|. .|+++++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|. ++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTY-AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCChH-HhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 4678899999998854444 788999999999999999887777788999999999999998854444444 7899999
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccC
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 178 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 178 (635)
|++|+|++..|..|+++++|+.|+|++|.|++
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 99999988888888888889999888888875
No 332
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.61 E-value=2.6e-16 Score=161.09 Aligned_cols=146 Identities=27% Similarity=0.298 Sum_probs=118.4
Q ss_pred CeEEEEEeCCCCccCcCCcccccCC-----CCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCC--CCCCc--C
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKL-----DALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGK--IPSSF--S 139 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~--~ 139 (635)
.+++.|+|++|++++. |+ .++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++.|. +|..+ .
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~-~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DA-WLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp CCCSEEEEESCBCSSS-SS-HHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCccEEEccCCCCcch-hH-HHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 5799999999999976 75 78877 9999999999999988889999999999999999998865 23333 2
Q ss_pred --CCcceeecccccCcc--cCC-chhhccccCCcEEcCCCcccCCCCC--C-CCCCCCeEEeecccCcCCCCcccC-CCC
Q 006696 140 --PQLVVLDLSFNSFTG--NIP-QSIQNLTQLTGLSLQSNNLSGSIPN--F-DIPKLRHLNLSYNGLKGSIPSSLQ-KFP 210 (635)
Q Consensus 140 --~~L~~L~ls~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~~~~~~--~-~l~~L~~l~l~~N~l~~~~p~~~~-~l~ 210 (635)
++|++|+|++|+|++ .++ ..+.++++|+.|+|++|+|++.+|. . .+++|+.|+|++|+|+ .+|..+. ++.
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L~ 277 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLS 277 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCCSEEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhccCCce
Confidence 799999999999983 222 3456789999999999999987753 2 5799999999999999 7787765 333
Q ss_pred CCCccCC
Q 006696 211 NSSFVGN 217 (635)
Q Consensus 211 ~l~~~~n 217 (635)
.|...+|
T Consensus 278 ~L~Ls~N 284 (312)
T 1wwl_A 278 VLDLSYN 284 (312)
T ss_dssp EEECCSS
T ss_pred EEECCCC
Confidence 4444444
No 333
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.60 E-value=8.3e-16 Score=146.12 Aligned_cols=127 Identities=24% Similarity=0.349 Sum_probs=109.4
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|++++|.++ .++ .++.+++|++|+|++|++++..|..+.++++|++|+|++|++++..|..+. ++|++|+
T Consensus 66 ~~L~~L~l~~n~~~-~~~--~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT-NYN--PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS-CCG--GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC-cch--hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 47899999999776 343 699999999999999999988899999999999999999999987777776 8999999
Q ss_pred ccccc-CcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcC
Q 006696 147 LSFNS-FTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 147 ls~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~ 200 (635)
|++|+ ++ .+| .+..+++|+.|++++|++++..+-..+++|+.|++++|++.+
T Consensus 143 L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred ccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99999 65 666 799999999999999999975533489999999999999874
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.60 E-value=7e-16 Score=151.38 Aligned_cols=145 Identities=18% Similarity=0.192 Sum_probs=122.8
Q ss_pred CeEEEEEeCCCC-ccCcCCcccccCCCCCcEEEeec-CCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcc-
Q 006696 69 TRVFGLRLPGIG-LVGPIPNNTLGKLDALEVLSLRS-NVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLV- 143 (635)
Q Consensus 69 ~~v~~l~l~~~~-l~g~lp~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~- 143 (635)
.+++.|+|++|. ++ .+++..|+++++|++|+|++ |++++..+..|.++++|++|+|++|++++ +|. +. ++|+
T Consensus 55 ~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 579999999997 76 67776899999999999999 99996666789999999999999999996 776 54 6777
Q ss_pred --eeecccc-cCcccCCchhhccccCC-cEEcCCCcccCCCCCC-CCCCCCeEEeeccc-CcCCCCcccCCC-CCCCccC
Q 006696 144 --VLDLSFN-SFTGNIPQSIQNLTQLT-GLSLQSNNLSGSIPNF-DIPKLRHLNLSYNG-LKGSIPSSLQKF-PNSSFVG 216 (635)
Q Consensus 144 --~L~ls~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~-~l~~L~~l~l~~N~-l~~~~p~~~~~l-~~l~~~~ 216 (635)
+|++++| ++++..+..|.++++|+ .|++++|+|+...+.. ..++|+.|+|++|+ +++..+..|.++ ++|..++
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~ 211 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLD 211 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEE
Confidence 9999999 99977777899999999 9999999999433332 44789999999995 987667778887 7776654
No 335
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.60 E-value=2.1e-15 Score=142.70 Aligned_cols=119 Identities=21% Similarity=0.277 Sum_probs=107.3
Q ss_pred CceeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccC
Q 006696 58 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 58 ~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (635)
.|..+.|+++. ..++.|+|++|+++ .+|. .|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 11 ~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~-~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 11 LDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp ETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCG-GGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHH-HhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 68888887532 36899999999998 8996 8999999999999999999877888999999999999999
Q ss_pred ccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccC
Q 006696 129 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 178 (635)
Q Consensus 129 ~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 178 (635)
+|++..|..|. ++|++|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99987777777 899999999999997666789999999999999999984
No 336
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.60 E-value=1.5e-15 Score=166.88 Aligned_cols=148 Identities=27% Similarity=0.372 Sum_probs=100.1
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCC--CCCCCCCCCCCCcEEeeccCccCCCCCCC-cC--CCcc
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG--GLPSEITSLPSLRYLYLQHNNFSGKIPSS-FS--PQLV 143 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~--~~L~ 143 (635)
.+++.|+|++|.+++.+|. .++++++|++|+|++|++++ .+|..+.++++|++|+|++|++++.+|.. +. ++|+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFE-NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CcccEEEeECCccChhhhh-hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4577777777777766666 67777777777777777775 45566777777777777777777656654 32 6777
Q ss_pred eeecccccCcccCCchhhccccCCcEEcCCCcccCCCCC-C-CCCCCCeEEeecccCcCCCCcc-cCCCCCCCc---cCC
Q 006696 144 VLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN-F-DIPKLRHLNLSYNGLKGSIPSS-LQKFPNSSF---VGN 217 (635)
Q Consensus 144 ~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~-~l~~L~~l~l~~N~l~~~~p~~-~~~l~~l~~---~~n 217 (635)
+|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|. . .+++|+.|+|++|+|+ .+|.. +.++++|.. .+|
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N 478 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTN 478 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCC
Confidence 777777777766666554 67777777777777 4443 2 6777777777777777 45543 555555443 344
Q ss_pred CCCC
Q 006696 218 SLLC 221 (635)
Q Consensus 218 ~~~~ 221 (635)
+..|
T Consensus 479 ~~~c 482 (520)
T 2z7x_B 479 PWDC 482 (520)
T ss_dssp CBCC
T ss_pred CCcc
Confidence 4444
No 337
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.59 E-value=1.6e-15 Score=168.38 Aligned_cols=144 Identities=26% Similarity=0.297 Sum_probs=98.6
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCC-CCCCCCCCCcEEeeccCccCCCCCCCcC--CCccee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L 145 (635)
.+++.|+|++|.++ .+|+ .++.+++|++|+|++|++++..| ..+.++++|++|+|++|.+.+..|..+. ++|++|
T Consensus 373 ~~L~~L~l~~n~l~-~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 373 TSLKYLDLSFNGVI-TMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp SCCCEEECCSCSEE-EEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CccCEEECCCCccc-cccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 34566666666666 3444 26777777777777777775555 4567777777777777777766666665 677777
Q ss_pred ecccccCc-ccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCc
Q 006696 146 DLSFNSFT-GNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 214 (635)
Q Consensus 146 ~ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~ 214 (635)
+|++|+++ +.+|..+..+++|+.|+|++|++++..|.. .+++|+.|+|++|++++..|..+.++++|..
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 522 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQK 522 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcE
Confidence 77777776 567777777777777777777777665543 6677777777777777666666666655543
No 338
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=7.1e-16 Score=139.47 Aligned_cols=123 Identities=17% Similarity=0.258 Sum_probs=107.6
Q ss_pred CCCCCcEEEeecCCCC-CCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCc
Q 006696 92 KLDALEVLSLRSNVLT-GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTG 168 (635)
Q Consensus 92 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 168 (635)
..++|+.|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+. ++|++|+|++|+|++.+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 89999999999999999999999966 5555 79999999999999889999999999999
Q ss_pred EEcCCCcccCCC--CCC-CCCCCCeEEeecccCcCCCC---cccCCCCCCCccC
Q 006696 169 LSLQSNNLSGSI--PNF-DIPKLRHLNLSYNGLKGSIP---SSLQKFPNSSFVG 216 (635)
Q Consensus 169 L~l~~N~l~~~~--~~~-~l~~L~~l~l~~N~l~~~~p---~~~~~l~~l~~~~ 216 (635)
|++++|+|++.. +.. .+++|+.|++++|++++..+ ..+..+++|..++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 146 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLD 146 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEET
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCccccc
Confidence 999999999743 333 88999999999999997655 4788888887765
No 339
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=2e-15 Score=139.54 Aligned_cols=124 Identities=22% Similarity=0.290 Sum_probs=108.1
Q ss_pred CCCCCcEEEeecCCCC-CCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCc
Q 006696 92 KLDALEVLSLRSNVLT-GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTG 168 (635)
Q Consensus 92 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 168 (635)
..++|+.|+|++|+++ +.+|..+.++++|++|+|++|.+++. ..+. ++|++|+|++|++++.+|..+.++++|+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4478999999999998 88999999999999999999999965 5555 89999999999999889999989999999
Q ss_pred EEcCCCcccCCC--CCC-CCCCCCeEEeecccCcCCCC---cccCCCCCCCccCC
Q 006696 169 LSLQSNNLSGSI--PNF-DIPKLRHLNLSYNGLKGSIP---SSLQKFPNSSFVGN 217 (635)
Q Consensus 169 L~l~~N~l~~~~--~~~-~l~~L~~l~l~~N~l~~~~p---~~~~~l~~l~~~~n 217 (635)
|+|++|+|++.. +.. .+++|+.|++++|.+++..+ ..+..+++|..++-
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 154 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDG 154 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETT
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecC
Confidence 999999999754 233 89999999999999996555 47888888877753
No 340
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.59 E-value=2.6e-15 Score=166.01 Aligned_cols=146 Identities=22% Similarity=0.284 Sum_probs=108.2
Q ss_pred CeEEEEEeCCCCccCcCCc--ccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPN--NTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~ 146 (635)
.+++.|+|++|.+++ +++ ..++.+++|++|+|++|+|+ .+|..+..+++|++|+|++|+++ .+|..+.++|++|+
T Consensus 361 ~~L~~L~Ls~N~l~~-~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~ 437 (549)
T 2z81_A 361 PSLQTLVLSQNHLRS-MQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLD 437 (549)
T ss_dssp TTCCEEECTTSCCCC-HHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSCTTCSEEE
T ss_pred ccCcEEEccCCcccc-cccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhcCCceEEE
Confidence 356667777776663 331 24777778888888888887 67777778888888888888877 56666667888888
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCC-CCCCCCeEEeecccCcCCCCcccCCCCCCCc---cCCCCCCC
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF---VGNSLLCG 222 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~---~~n~~~~g 222 (635)
|++|+|++.+ ..+++|++|+|++|+|+ .+|.. .+++|+.|+|++|++++.+|..+.++++|.. .+|+..|.
T Consensus 438 Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 438 VSNNNLDSFS----LFLPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred CCCCChhhhc----ccCChhcEEECCCCccC-cCCCcccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 8888888643 47889999999999998 45544 7889999999999999888877777766554 45555443
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.59 E-value=6.4e-16 Score=157.95 Aligned_cols=146 Identities=21% Similarity=0.227 Sum_probs=120.1
Q ss_pred eEEEEEeCCCCccCcCCcccc--cCCCCCcEEEeecCCCCCCCC----CCCCCCCCCcEEeeccCccCCCCCCCcC--CC
Q 006696 70 RVFGLRLPGIGLVGPIPNNTL--GKLDALEVLSLRSNVLTGGLP----SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQ 141 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~ 141 (635)
+++.|+|++|++++.+|. .+ +.+++|++|+|++|++++..| ..+..+++|++|+|++|++++..|..|. ++
T Consensus 92 ~L~~L~l~~n~l~~~~~~-~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPP-LPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp CCCEEEEESCCCBSCCCC-CSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred ceeEEEeeCCEeccchhh-hhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 489999999999998888 56 999999999999999997665 3456899999999999999988878876 89
Q ss_pred cceeecccccCccc--C--CchhhccccCCcEEcCCCcccCCCCC-----CCCCCCCeEEeecccCcCCCCcccCCC---
Q 006696 142 LVVLDLSFNSFTGN--I--PQSIQNLTQLTGLSLQSNNLSGSIPN-----FDIPKLRHLNLSYNGLKGSIPSSLQKF--- 209 (635)
Q Consensus 142 L~~L~ls~N~l~~~--~--p~~~~~l~~L~~L~l~~N~l~~~~~~-----~~l~~L~~l~l~~N~l~~~~p~~~~~l--- 209 (635)
|++|+|++|++.+. + +..++.+++|++|+|++|+|+...+. ..+++|++|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 99999999998753 2 23357899999999999999743321 167999999999999998888877766
Q ss_pred CCCCccC
Q 006696 210 PNSSFVG 216 (635)
Q Consensus 210 ~~l~~~~ 216 (635)
++|..++
T Consensus 251 ~~L~~L~ 257 (310)
T 4glp_A 251 SALNSLN 257 (310)
T ss_dssp TTCCCEE
T ss_pred CcCCEEE
Confidence 3555443
No 342
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.58 E-value=3.7e-15 Score=157.45 Aligned_cols=108 Identities=26% Similarity=0.348 Sum_probs=81.1
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCC-cC--CCccee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSS-FS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~--~~L~~L 145 (635)
.+++.|+|++|.+++ +++..|+++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|.. |. ++|++|
T Consensus 69 ~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 69 RQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTL 146 (390)
T ss_dssp CCCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ccCcEEECCCCcccc-cChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEE
Confidence 357778888888774 44446888888888888888888766777788888888888888887 44444 33 678888
Q ss_pred ecccccCcccCCchhhccccCCcEEcCCCcccC
Q 006696 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 178 (635)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 178 (635)
+|++|++++..|..|.++++|+.|++++|++++
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 888888887777778888888888888887764
No 343
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.58 E-value=4.7e-15 Score=168.39 Aligned_cols=140 Identities=23% Similarity=0.267 Sum_probs=91.6
Q ss_pred cCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCC--------CcC--CCcceeecccccCc
Q 006696 84 PIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPS--------SFS--PQLVVLDLSFNSFT 153 (635)
Q Consensus 84 ~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--------~~~--~~L~~L~ls~N~l~ 153 (635)
.+|. .++++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+. .|. ++|++|+|++|+|+
T Consensus 471 ~~p~-~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 549 (680)
T 1ziw_A 471 SSPS-PFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD 549 (680)
T ss_dssp CSSC-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC
T ss_pred cCCc-ccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC
Confidence 4454 566777777777777777755556677777777777777777643111 122 56777777777777
Q ss_pred ccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcc----cCCCCCCCccCCCCCCCCC
Q 006696 154 GNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSS----LQKFPNSSFVGNSLLCGPP 224 (635)
Q Consensus 154 ~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~----~~~l~~l~~~~n~~~~g~~ 224 (635)
...+..|.++++|+.|+|++|+|++.++.. .+++|+.|+|++|++++..|.. +.++..+...+|+..|.+.
T Consensus 550 ~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 550 EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 433445777777777777777777655543 6677777888777777665553 3455555666777777643
No 344
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.57 E-value=2.1e-15 Score=167.46 Aligned_cols=143 Identities=21% Similarity=0.213 Sum_probs=124.1
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|++++ +++..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|. ++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCE-ECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCc-cChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 468899999999995 4444899999999999999999977788899999999999999999977777776 8999999
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccC-CCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCC
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG-SIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNS 212 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l 212 (635)
|++|++++..+..|+++++|++|+|++|.+++ .+|.. .+++|+.|++++|++++..|..+.++++|
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 175 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTC
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhcc
Confidence 99999996666679999999999999999987 35654 78999999999999998777777776665
No 345
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.56 E-value=9.2e-15 Score=162.16 Aligned_cols=139 Identities=27% Similarity=0.262 Sum_probs=118.5
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceeecc
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~ls 148 (635)
.+++.|+|++|++++ +++..|+++++|++|+|++|+|++..|..|.++++|++|+|++|+++ .+|..-.++|++|+|+
T Consensus 52 ~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~l~~L~~L~Ls 129 (562)
T 3a79_B 52 PRTKALSLSQNSISE-LRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCCPMASLRHLDLS 129 (562)
T ss_dssp TTCCEEECCSSCCCC-CCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSCCCTTCSEEECC
T ss_pred CCcCEEECCCCCccc-cChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCccccccCCEEECC
Confidence 478999999999995 55558999999999999999999888899999999999999999999 6777644899999999
Q ss_pred cccCcc-cCCchhhccccCCcEEcCCCcccCCCCCCCCCCC--CeEEeecccC--cCCCCcccCCCC
Q 006696 149 FNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKL--RHLNLSYNGL--KGSIPSSLQKFP 210 (635)
Q Consensus 149 ~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L--~~l~l~~N~l--~~~~p~~~~~l~ 210 (635)
+|+|++ .+|..|+++++|++|+|++|+|++. .-..+++| +.|+|++|.+ ++..|..+..+.
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~ 195 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL-DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPN 195 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT-TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECC
T ss_pred CCCccccCchHhhcccCcccEEecCCCccccC-chhhhhhceeeEEEeecccccccccCcccccccC
Confidence 999996 3568999999999999999999862 22245555 9999999999 888888887765
No 346
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.56 E-value=1.2e-15 Score=156.36 Aligned_cols=144 Identities=22% Similarity=0.215 Sum_probs=91.3
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCC-C---------------CCCCCCCcEEeeccCccCC
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-E---------------ITSLPSLRYLYLQHNNFSG 132 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~-~---------------~~~l~~L~~L~l~~N~l~~ 132 (635)
.+++.|+|++|.+++.. + ++.+++|++|+|++|++++..+. . ...+++|++|+|++|++++
T Consensus 58 ~~L~~L~Ls~n~l~~~~-~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 58 TKLELLNLSSNVLYETL-D--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (317)
T ss_dssp TTCCEEECTTSCCEEEE-E--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCS
T ss_pred CcCCEEECCCCcCCcch-h--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCC
Confidence 46778888888887533 2 77788888888887777642110 0 1123455666666666665
Q ss_pred CCCCCcC--CCcceeecccccCcccCCchhh-ccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCcccCCC
Q 006696 133 KIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ-NLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKF 209 (635)
Q Consensus 133 ~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l 209 (635)
..|..+. ++|++|+|++|+|++..|..+. .+++|++|+|++|+|++..+...+++|+.|+|++|++++ +|..+..+
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l 213 (317)
T 3o53_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF-MGPEFQSA 213 (317)
T ss_dssp GGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCE-ECGGGGGG
T ss_pred ccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCc-chhhhccc
Confidence 4454554 5677777777777766666553 567777777777777755444467777788888887774 44446666
Q ss_pred CCCCccC
Q 006696 210 PNSSFVG 216 (635)
Q Consensus 210 ~~l~~~~ 216 (635)
++|..++
T Consensus 214 ~~L~~L~ 220 (317)
T 3o53_A 214 AGVTWIS 220 (317)
T ss_dssp TTCSEEE
T ss_pred CcccEEE
Confidence 6665543
No 347
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.56 E-value=9.4e-15 Score=147.77 Aligned_cols=136 Identities=32% Similarity=0.400 Sum_probs=101.1
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|++++ +++ ++++++|++|+|++|++++ +| .+.++++|++|+|++|++++. + .+. ++|++|+
T Consensus 68 ~~L~~L~L~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~-~l~~l~~L~~L~ 140 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTD-IKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-N-GLVHLPQLESLY 140 (291)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-G-GGGGCTTCCEEE
T ss_pred CCCCEEEccCCccCC-Ccc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-h-hhcCCCCCCEEE
Confidence 467788888888874 554 7888888888888888874 44 378888888888888888753 3 333 7788888
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
|++|+|++. ..+..+++|+.|+|++|+|++..+-..+++|+.|+|++|.+++ +| .+.++++|..+
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L 205 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVL 205 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEE
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 888888854 5688888888888888888876664477888888888888875 44 36666666554
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.55 E-value=7.1e-15 Score=152.88 Aligned_cols=96 Identities=21% Similarity=0.239 Sum_probs=66.2
Q ss_pred CCceeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCC-CCCCCCCCcE-Eee
Q 006696 57 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-EITSLPSLRY-LYL 125 (635)
Q Consensus 57 ~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~-L~l 125 (635)
|+|..|.|++.. ..++.|+|++|+|+ .||++.|++|++|++|+|++|++.+.+|. .|.++++|.. +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 478999997532 36889999999998 78887899999999999999998766653 4555555443 444
Q ss_pred ccCccCCCCCCCcC--CCcceeecccccCc
Q 006696 126 QHNNFSGKIPSSFS--PQLVVLDLSFNSFT 153 (635)
Q Consensus 126 ~~N~l~~~~p~~~~--~~L~~L~ls~N~l~ 153 (635)
+.|++++..|..|. ++|++|++++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~ 117 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIK 117 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCS
T ss_pred cCCcccccCchhhhhccccccccccccccc
Confidence 45555544444443 45555555555544
No 349
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.55 E-value=7.4e-16 Score=158.02 Aligned_cols=138 Identities=19% Similarity=0.163 Sum_probs=83.6
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC---CCcceee
Q 006696 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVLD 146 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~---~~L~~L~ 146 (635)
.++.|++++|.+++ ++. ..+++|++|+|++|++++..|..+.++++|++|+|++|.+++..|..+. ++|++|+
T Consensus 100 ~L~~L~l~~n~l~~-~~~---~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 100 SIETLHAANNNISR-VSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TCCEEECCSSCCSE-EEE---CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CcCEEECCCCccCC-cCc---cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 34455555555553 222 2356677777777777765566667777777777777777765555553 5677777
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCC-CCCCCCeEEeecccCcCCCCcccCCCCCCCc
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 214 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~ 214 (635)
|++|+|++. | ....+++|+.|+|++|+|++.++.. .+++|+.|+|++|+++ .+|..+..+++|..
T Consensus 176 L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~ 241 (317)
T 3o53_A 176 LQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEH 241 (317)
T ss_dssp CTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCE
T ss_pred CCCCcCccc-c-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCE
Confidence 777777644 2 2234666777777777776554443 5666777777777776 35555555554443
No 350
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.54 E-value=7.5e-16 Score=175.26 Aligned_cols=137 Identities=27% Similarity=0.308 Sum_probs=119.2
Q ss_pred CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCccee
Q 006696 68 RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 68 ~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L 145 (635)
...++.|+|++|.+. .+|+ .+.++++|++|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+|..|. ++|++|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISA-NIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCG-GGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred CCCCcEEECCCCCCC-CCCh-hhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 357899999999998 8998 5779999999999999999 89999999999999999999999 8899987 899999
Q ss_pred ecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CC-CCCCeEEeecccCcCCCCcccCCC
Q 006696 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DI-PKLRHLNLSYNGLKGSIPSSLQKF 209 (635)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l-~~L~~l~l~~N~l~~~~p~~~~~l 209 (635)
+|++|.|+ .+|..|++|++|+.|+|++|.|++.+|.. .+ ..+..|+|++|.++|.+|..+..+
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l 364 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFI 364 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccccee
Confidence 99999998 88999999999999999999999988764 11 123357899999999999876654
No 351
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.54 E-value=1.4e-14 Score=146.47 Aligned_cols=136 Identities=22% Similarity=0.321 Sum_probs=116.8
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|++++|++. .++ .++.+++|++|+|++|++++..| +.++++|++|+|++|++++ +|. +. ++|++|+
T Consensus 46 ~~L~~L~l~~~~i~-~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 118 (291)
T 1h6t_A 46 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLS 118 (291)
T ss_dssp HTCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCEEE
T ss_pred CcccEEEccCCCcc-cCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hccCCCCCEEE
Confidence 46899999999998 566 48999999999999999996544 9999999999999999996 443 44 8999999
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCC-CCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
|++|+|++. ..+..+++|+.|++++|+|++. +.. .+++|+.|+|++|++++..| +.++++|..++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 184 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 184 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEE
Confidence 999999963 5799999999999999999976 443 89999999999999997554 77888777654
No 352
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.54 E-value=1.7e-14 Score=150.21 Aligned_cols=149 Identities=23% Similarity=0.247 Sum_probs=124.5
Q ss_pred eeeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC
Q 006696 60 VGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS 139 (635)
Q Consensus 60 ~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 139 (635)
..+.|... .+ .++++++++ .+|. .+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.
T Consensus 26 ~~~~C~~~--~~--c~~~~~~l~-~iP~-~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (353)
T 2z80_A 26 ASLSCDRN--GI--CKGSSGSLN-SIPS-GLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFS 97 (353)
T ss_dssp -CCEECTT--SE--EECCSTTCS-SCCT-TCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred cCCCCCCC--eE--eeCCCCCcc-cccc-ccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcC
Confidence 46778652 33 899999999 7897 343 5899999999999966666899999999999999999987787787
Q ss_pred --CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCC-C-C-CCCCCCeEEeecc-cCcCCCCcccCCCCCCC
Q 006696 140 --PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIP-N-F-DIPKLRHLNLSYN-GLKGSIPSSLQKFPNSS 213 (635)
Q Consensus 140 --~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~-~-~l~~L~~l~l~~N-~l~~~~p~~~~~l~~l~ 213 (635)
++|++|+|++|+|++..+..|+++++|++|+|++|++++..+ . . .+++|+.|++++| .+.+..+..+.++++|.
T Consensus 98 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 177 (353)
T 2z80_A 98 SLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLE 177 (353)
T ss_dssp TCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEE
T ss_pred CCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCC
Confidence 899999999999996555569999999999999999996555 2 2 7999999999999 47766677888888877
Q ss_pred ccC
Q 006696 214 FVG 216 (635)
Q Consensus 214 ~~~ 216 (635)
.++
T Consensus 178 ~L~ 180 (353)
T 2z80_A 178 ELE 180 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 353
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.54 E-value=1.5e-14 Score=147.56 Aligned_cols=136 Identities=27% Similarity=0.378 Sum_probs=98.9
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.++ .+++ +..+++|++|+|++|++++ +| .+.++++|++|+|++|++++. |. +. ++|++|+
T Consensus 63 ~~L~~L~L~~n~i~-~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 63 NNLIGLELKDNQIT-DLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLY 135 (308)
T ss_dssp TTCCEEECCSSCCC-CCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCcCC-CChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEE
Confidence 46788888888887 4554 7888888888888888874 44 578888888888888888753 32 33 7788888
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
|++|++++..+ +..+++|+.|+|++|++++..+-..+++|+.|+|++|++++..+ +.++++|..+
T Consensus 136 l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L 200 (308)
T 1h6u_A 136 LDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEV 200 (308)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred CCCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh--hcCCCCCCEE
Confidence 88888875433 77888888888888888865554477888888888888875433 5556655544
No 354
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.53 E-value=4.9e-15 Score=162.72 Aligned_cols=139 Identities=27% Similarity=0.287 Sum_probs=121.1
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceeecc
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~ls 148 (635)
.+++.|+|++|++++ +++..|+++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|..-.++|++|+|+
T Consensus 21 ~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~l~~L~~L~L~ 98 (520)
T 2z7x_B 21 QKTTILNISQNYISE-LWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCHPTVNLKHLDLS 98 (520)
T ss_dssp TTCSEEECCSSCCCC-CCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECCCCCCCSEEECC
T ss_pred ccccEEECCCCcccc-cChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCccccCCccEEecc
Confidence 578999999999995 44448999999999999999999888999999999999999999999 6777644899999999
Q ss_pred cccCcc-cCCchhhccccCCcEEcCCCcccCCCCCCCCCCC--CeEEeecccC--cCCCCcccCCCC
Q 006696 149 FNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKL--RHLNLSYNGL--KGSIPSSLQKFP 210 (635)
Q Consensus 149 ~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L--~~l~l~~N~l--~~~~p~~~~~l~ 210 (635)
+|+|++ .+|..|+++++|++|+|++|+|++. .-..+++| +.|++++|.+ .+..|..+..+.
T Consensus 99 ~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 99 FNAFDALPICKEFGNMSQLKFLGLSTTHLEKS-SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp SSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG-GGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred CCccccccchhhhccCCcceEEEecCcccchh-hccccccceeeEEEeecccccccccccccccccc
Confidence 999997 5789999999999999999999862 22256777 9999999999 888888887765
No 355
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.53 E-value=1.4e-14 Score=147.87 Aligned_cols=139 Identities=25% Similarity=0.401 Sum_probs=118.1
Q ss_pred CCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcce
Q 006696 67 DRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVV 144 (635)
Q Consensus 67 ~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~ 144 (635)
...+++.|+|++|.+++ ++ .++.+++|++|+|++|++++ +|. +.++++|++|+|++|++++..+ +. ++|++
T Consensus 83 ~l~~L~~L~L~~n~l~~-~~--~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~ 155 (308)
T 1h6u_A 83 NLTKITELELSGNPLKN-VS--AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQY 155 (308)
T ss_dssp TCCSCCEEECCSCCCSC-CG--GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCE
T ss_pred cCCCCCEEEccCCcCCC-ch--hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccE
Confidence 34579999999999985 55 59999999999999999995 453 9999999999999999996544 44 89999
Q ss_pred eecccccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 145 LDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 145 L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
|+|++|++++. +. +..+++|+.|+|++|++++..+-..+++|+.|+|++|++++..| +.++++|..++
T Consensus 156 L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 223 (308)
T 1h6u_A 156 LSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVT 223 (308)
T ss_dssp EECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEE
T ss_pred EEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcccc--ccCCCCCCEEE
Confidence 99999999964 44 99999999999999999977664589999999999999996543 77777776553
No 356
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=8.6e-15 Score=136.39 Aligned_cols=124 Identities=24% Similarity=0.335 Sum_probs=101.3
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCC-CCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCc-C--CCcce
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLD-ALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSF-S--PQLVV 144 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~--~~L~~ 144 (635)
.+++.|+|++|+++ .+|. +..+. +|++|+|++|+|++. ..|.++++|++|+|++|+|++ +|..+ . ++|++
T Consensus 19 ~~L~~L~l~~n~l~-~i~~--~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN--LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IGEGLDQALPDLTE 92 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC--GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-ECSCHHHHCTTCCE
T ss_pred CCceEEEeeCCCCc-hhHH--hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cCcchhhcCCCCCE
Confidence 46889999999998 5664 55555 999999999999964 579999999999999999995 45444 4 88999
Q ss_pred eecccccCcccCCc--hhhccccCCcEEcCCCcccCCCCC----C-CCCCCCeEEeecccCc
Q 006696 145 LDLSFNSFTGNIPQ--SIQNLTQLTGLSLQSNNLSGSIPN----F-DIPKLRHLNLSYNGLK 199 (635)
Q Consensus 145 L~ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~----~-~l~~L~~l~l~~N~l~ 199 (635)
|+|++|+|+ .+|. .+..+++|+.|++++|.++...+. . .+++|+.||+++|.+.
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999997 5666 888999999999999999854432 2 7889999999998775
No 357
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=3.5e-14 Score=131.42 Aligned_cols=105 Identities=25% Similarity=0.263 Sum_probs=85.9
Q ss_pred EEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeeccc
Q 006696 72 FGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSF 149 (635)
Q Consensus 72 ~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~ 149 (635)
+.|++++|+|+ .+|. .+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|. ++|++|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~-~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPT-GI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCc-cC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 46888899998 6887 34 38999999999999988888999999999999999999966555554 7888888888
Q ss_pred ccCcccCCchhhccccCCcEEcCCCcccCCC
Q 006696 150 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSI 180 (635)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 180 (635)
|+|++..+..|.++++|+.|+|++|.++...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 8888666667888888888888888877544
No 358
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.52 E-value=1.4e-14 Score=159.80 Aligned_cols=117 Identities=25% Similarity=0.263 Sum_probs=91.6
Q ss_pred EEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecc
Q 006696 71 VFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLS 148 (635)
Q Consensus 71 v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls 148 (635)
++.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .+. ++|++|+|+
T Consensus 443 L~~L~Ls~n~l~~-lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH--LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp CSEEECTTSCCSS-CCC--GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred ceEEEecCCCCCC-CcC--ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 5678888888884 664 888888888888888888 778888888888888888888885 56 555 778888888
Q ss_pred cccCcccC-CchhhccccCCcEEcCCCcccCCCCCC-----CCCCCCeEEe
Q 006696 149 FNSFTGNI-PQSIQNLTQLTGLSLQSNNLSGSIPNF-----DIPKLRHLNL 193 (635)
Q Consensus 149 ~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~-----~l~~L~~l~l 193 (635)
+|+|++.. |..|+.|++|+.|+|++|+|++.+|.. .+++|+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 88888766 888888888888888888888776653 3677777764
No 359
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.52 E-value=4.4e-14 Score=131.23 Aligned_cols=112 Identities=25% Similarity=0.296 Sum_probs=89.3
Q ss_pred eeeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC
Q 006696 60 VGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS 139 (635)
Q Consensus 60 ~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 139 (635)
.+..|.. +.+++++|+++ .+|. .+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.
T Consensus 8 ~~C~C~~-----~~l~~~~n~l~-~iP~-~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~ 78 (174)
T 2r9u_A 8 SQCSCDQ-----TLVNCQNIRLA-SVPA-GIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFD 78 (174)
T ss_dssp TTSEECS-----SEEECCSSCCS-SCCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCCEECC-----cEEEeCCCCCC-ccCC-CcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhC
Confidence 3456743 56899999997 8998 453 8999999999999988889999999999999999999965444444
Q ss_pred --CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCC
Q 006696 140 --PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSI 180 (635)
Q Consensus 140 --~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 180 (635)
++|++|+|++|+|++..+..|..+++|+.|+|++|.+....
T Consensus 79 ~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 79 KLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 78888888888888655556888888888888888877443
No 360
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.52 E-value=2.4e-14 Score=133.42 Aligned_cols=124 Identities=27% Similarity=0.312 Sum_probs=107.9
Q ss_pred CCceeeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeecc
Q 006696 57 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 127 (635)
Q Consensus 57 ~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 127 (635)
|+|.++.|.... .+++.|+|++|+++ .+|+..|+.+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCccc-EeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 389999997532 46899999999999 56665789999999999999999966667789999999999999
Q ss_pred CccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCC
Q 006696 128 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIP 181 (635)
Q Consensus 128 N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 181 (635)
|++++..+..+. ++|++|+|++|+|++..+..+..+++|+.|+|++|.+.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999976666665 899999999999997666678999999999999999997665
No 361
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=6.5e-17 Score=153.95 Aligned_cols=143 Identities=25% Similarity=0.331 Sum_probs=119.3
Q ss_pred eEEEEEeCCCCccCcCCc-----ccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCc
Q 006696 70 RVFGLRLPGIGLVGPIPN-----NTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQL 142 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~-----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L 142 (635)
+|+.++++++.++|.+|. ..++.+++|++|+|++|++++ +| .+.++++|++|+|++|+++ .+|..+. ++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455666666667666663 258999999999999999995 78 8999999999999999999 6787665 799
Q ss_pred ceeecccccCcccCCchhhccccCCcEEcCCCcccCCCC--C-CCCCCCCeEEeecccCcCCCCcc----------cCCC
Q 006696 143 VVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIP--N-FDIPKLRHLNLSYNGLKGSIPSS----------LQKF 209 (635)
Q Consensus 143 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~--~-~~l~~L~~l~l~~N~l~~~~p~~----------~~~l 209 (635)
++|+|++|+|++ +| .+..+++|+.|+|++|+|++..+ . ..+++|+.|++++|.+++.+|.. +.++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l 173 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhC
Confidence 999999999996 55 79999999999999999996433 2 27999999999999998776653 7788
Q ss_pred CCCCccCC
Q 006696 210 PNSSFVGN 217 (635)
Q Consensus 210 ~~l~~~~n 217 (635)
++|..++.
T Consensus 174 ~~L~~Ld~ 181 (198)
T 1ds9_A 174 PNLKKLDG 181 (198)
T ss_dssp SSCSEECC
T ss_pred CCcEEECC
Confidence 88887763
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.51 E-value=3.2e-14 Score=157.91 Aligned_cols=137 Identities=33% Similarity=0.396 Sum_probs=117.0
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.|++ +++ ++.+++|+.|+|++|+|++ +| .+.+|++|+.|+|++|+|++ +| .+. ++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~-~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTD-IKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEE
T ss_pred CCCCEEEeeCCCCCC-Chh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEE
Confidence 578999999999995 554 8999999999999999994 55 79999999999999999996 33 343 8999999
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
|++|+|++. ..|..|++|+.|+|++|+|++.+|...+++|+.|+|++|+|++. | .+.++++|..++
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~ 203 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLE 203 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEE
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEE
Confidence 999999965 67999999999999999999888855899999999999999964 3 577777776553
No 363
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.49 E-value=6.4e-14 Score=153.94 Aligned_cols=118 Identities=28% Similarity=0.424 Sum_probs=83.7
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceeecc
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~ls 148 (635)
.+++.|+|++|+|+ .+| +.+++|++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. ..++|++|+|+
T Consensus 80 ~~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls 148 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE-LPALLEYINAD 148 (571)
T ss_dssp TTCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC-CCTTCCEEECC
T ss_pred CCCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC-cCccccEEeCC
Confidence 35778888888887 677 346788888888888885 776 655 78888888888875 666 45777777777
Q ss_pred cccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCc
Q 006696 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPS 204 (635)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 204 (635)
+|+|++ +|. .+++|+.|+|++|+|++ +|... ++|+.|+|++|+|+ .+|.
T Consensus 149 ~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 149 NNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPELP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCS-SCCC
T ss_pred CCccCc-CCC---cCCCcCEEECCCCCCCC-cchhh-CCCCEEECcCCCCC-chhh
Confidence 777774 554 46677777777777776 44333 67777777777777 4555
No 364
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=9.4e-14 Score=128.50 Aligned_cols=103 Identities=29% Similarity=0.341 Sum_probs=92.4
Q ss_pred CcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCC
Q 006696 96 LEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQS 173 (635)
Q Consensus 96 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 173 (635)
.+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|. ++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578999999999 6887774 8999999999999988888887 8999999999999977777889999999999999
Q ss_pred CcccCCCCCC--CCCCCCeEEeecccCcCC
Q 006696 174 NNLSGSIPNF--DIPKLRHLNLSYNGLKGS 201 (635)
Q Consensus 174 N~l~~~~~~~--~l~~L~~l~l~~N~l~~~ 201 (635)
|+|++.++.. .+++|+.|+|++|.++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 9999877753 899999999999999854
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.47 E-value=5.5e-14 Score=156.05 Aligned_cols=136 Identities=24% Similarity=0.344 Sum_probs=117.3
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|++. .+| .++.|++|+.|+|++|+|++..| +.+|++|+.|+|++|.|++ +| .+. ++|++|+
T Consensus 43 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 43 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp TTCCCCBCTTCCCC-CCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCEEECcCCCCC-CCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 46888999999998 566 49999999999999999996555 9999999999999999995 44 454 8999999
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCC-CCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
|++|+|++ + +.+..|++|+.|+|++|+|++. +.. .+++|+.|+|++|+|++..| +..+++|..++
T Consensus 116 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 116 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp CTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 99999995 3 4699999999999999999976 443 89999999999999997666 77777776654
No 366
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.47 E-value=1.2e-14 Score=156.46 Aligned_cols=135 Identities=22% Similarity=0.239 Sum_probs=74.8
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCC-------------cEEeeccCccCCCCC
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSL-------------RYLYLQHNNFSGKIP 135 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------------~~L~l~~N~l~~~~p 135 (635)
.+++.|++++|++ |.+|+ .+++|++|++|+|++|+++|.+|..++++++| ++|++++|.+++ +|
T Consensus 11 ~~L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred ccchhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 5788899999999 79998 69999999999999999999999999988765 888888888875 44
Q ss_pred CCcCCCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 136 SSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 136 ~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
. +.++|++|++++|++++ +|.. +++|+.|++++|++++. |.. .++|++|++++|++++ +| .+.++++|+.+
T Consensus 88 ~-~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~-~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L 158 (454)
T 1jl5_A 88 E-LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL-PPLLEYLGVSNNQLEK-LP-ELQNSSFLKII 158 (454)
T ss_dssp S-CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC-CTTCCEEECCSSCCSS-CC-CCTTCTTCCEE
T ss_pred C-CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC-CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEE
Confidence 4 34677777777777775 5543 25566666666666542 211 1456666666666654 44 35555554443
No 367
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=1.7e-13 Score=127.24 Aligned_cols=102 Identities=25% Similarity=0.309 Sum_probs=90.2
Q ss_pred CcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCC
Q 006696 96 LEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQS 173 (635)
Q Consensus 96 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 173 (635)
-+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|. ++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999997 8888775 8999999999999988888886 8999999999999976666789999999999999
Q ss_pred CcccCCCCCC--CCCCCCeEEeecccCcC
Q 006696 174 NNLSGSIPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 174 N~l~~~~~~~--~l~~L~~l~l~~N~l~~ 200 (635)
|+|++.++.. .+++|+.|+|++|.+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 9999777753 78999999999999983
No 368
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.46 E-value=1.1e-13 Score=149.87 Aligned_cols=138 Identities=33% Similarity=0.356 Sum_probs=101.8
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceeecc
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~ls 148 (635)
.+++.|+|++|.+++ ++ .+..+++|+.|+|++|++++..| +.++++|+.|++++|.+++..|-.-.++|++|+|+
T Consensus 221 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~ 295 (466)
T 1o6v_A 221 TNLDELSLNGNQLKD-IG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELN 295 (466)
T ss_dssp TTCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC
T ss_pred CCCCEEECCCCCccc-ch--hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccCeEEcC
Confidence 467888888888874 43 47888888888888888886554 78888888888888888865442222778888888
Q ss_pred cccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
+|++++..| +..+++|+.|+|++|++++..|...+++|+.|++++|++++. ..+.++++|..+
T Consensus 296 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 358 (466)
T 1o6v_A 296 ENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV--SSLANLTNINWL 358 (466)
T ss_dssp SSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred CCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc--hhhccCCCCCEE
Confidence 888886444 778888888888888888776645777888888888887754 356666666554
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.46 E-value=1.8e-13 Score=136.21 Aligned_cols=123 Identities=24% Similarity=0.290 Sum_probs=105.8
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.+++ +|+ ++++++|+.|+|++|++++ +|. +.. ++|+.|+|++|++++ +| .+. ++|++|+
T Consensus 63 ~~L~~L~L~~N~i~~-~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 63 TNLKELHLSHNQISD-LSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCccCC-Chh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 579999999999994 665 9999999999999999995 564 333 999999999999996 44 344 8999999
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCC
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGS 201 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~ 201 (635)
|++|+|++. | .+..+++|+.|+|++|+|++...-..+++|+.|++++|.+++.
T Consensus 135 Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCCC-h-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 999999964 4 7999999999999999999873233899999999999999864
No 370
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.45 E-value=7.6e-14 Score=129.91 Aligned_cols=124 Identities=17% Similarity=0.117 Sum_probs=103.1
Q ss_pred cccCCCCCcEEEeecCCCCCCCCCCCCCCC-CCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhcccc
Q 006696 89 TLGKLDALEVLSLRSNVLTGGLPSEITSLP-SLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQ 165 (635)
Q Consensus 89 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~ 165 (635)
.+.++.+|+.|+|++|+++ .+|. +..+. +|++|+|++|.+++. ..+. ++|++|+|++|+|++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4778999999999999999 5664 66665 999999999999964 4555 79999999999999665566699999
Q ss_pred CCcEEcCCCcccCCCC--CC-CCCCCCeEEeecccCcCCCCcc----cCCCCCCCccCC
Q 006696 166 LTGLSLQSNNLSGSIP--NF-DIPKLRHLNLSYNGLKGSIPSS----LQKFPNSSFVGN 217 (635)
Q Consensus 166 L~~L~l~~N~l~~~~~--~~-~l~~L~~l~l~~N~l~~~~p~~----~~~l~~l~~~~n 217 (635)
|+.|+|++|+|+...+ .. .+++|+.|++++|.++ .+|.. +..+++|..++-
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 9999999999975333 22 7899999999999998 56664 788888877763
No 371
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.44 E-value=1e-13 Score=154.11 Aligned_cols=149 Identities=26% Similarity=0.375 Sum_probs=105.2
Q ss_pred CCCCCCCCCCCceee--------EecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCC
Q 006696 48 NWSSTNPICQSWVGI--------NCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPS 119 (635)
Q Consensus 48 ~w~~~~~~c~~w~gv--------~c~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 119 (635)
.|....++| .|.|. .|.. ..++.|++++|+|+ .+|. .+. ++|+.|+|++|+|+ .+|. .+++
T Consensus 14 ~W~~~~~~~-~~~~r~~~~~~~~~c~~--~~l~~L~ls~n~L~-~lp~-~l~--~~L~~L~L~~N~l~-~lp~---~l~~ 82 (622)
T 3g06_A 14 AWRRAAPAE-ESRGRAAVVQKMRACLN--NGNAVLNVGESGLT-TLPD-CLP--AHITTLVIPDNNLT-SLPA---LPPE 82 (622)
T ss_dssp HHHHTCCGG-GHHHHHHHHHHHHHHHH--HCCCEEECCSSCCS-CCCS-CCC--TTCSEEEECSCCCS-CCCC---CCTT
T ss_pred HHHhcCCcc-hhccccccCcccccccC--CCCcEEEecCCCcC-ccCh-hhC--CCCcEEEecCCCCC-CCCC---cCCC
Confidence 576555555 78653 3332 35788999999998 8887 444 78999999999988 6776 5788
Q ss_pred CcEEeeccCccCCCCCCCcCCCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCc
Q 006696 120 LRYLYLQHNNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLK 199 (635)
Q Consensus 120 L~~L~l~~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~ 199 (635)
|++|+|++|+|+ .+|. ..++|++|+|++|+|++ +|. .+++|+.|++++|+|++. |. .+++|++|+|++|+++
T Consensus 83 L~~L~Ls~N~l~-~lp~-~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~l-p~-~l~~L~~L~Ls~N~l~ 154 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV-LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTSL-PV-LPPGLQELSVSDNQLA 154 (622)
T ss_dssp CCEEEECSCCCS-CCCC-CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSCC-CC-CCTTCCEEECCSSCCS
T ss_pred CCEEEcCCCcCC-cCCC-CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCcC-CC-CCCCCCEEECcCCcCC
Confidence 889999999888 5666 34788888888888884 454 567778888888887753 33 3477777777777777
Q ss_pred CCCCcccCCCCCCCccC
Q 006696 200 GSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 200 ~~~p~~~~~l~~l~~~~ 216 (635)
+ +|..+.++..|...+
T Consensus 155 ~-l~~~~~~L~~L~L~~ 170 (622)
T 3g06_A 155 S-LPALPSELCKLWAYN 170 (622)
T ss_dssp C-CCCCCTTCCEEECCS
T ss_pred C-cCCccCCCCEEECCC
Confidence 4 454555554444333
No 372
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.43 E-value=6e-13 Score=143.15 Aligned_cols=132 Identities=25% Similarity=0.381 Sum_probs=99.6
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceeeccc
Q 006696 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLSF 149 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~ls~ 149 (635)
+++.|++++|++++ +|. + .++|++|+|++|++++ +| +|+++++|++|++++|++++ +|..+ .+|++|++++
T Consensus 112 ~L~~L~l~~n~l~~-l~~--~--~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~-~~L~~L~L~~ 182 (454)
T 1jl5_A 112 SLKSLLVDNNNLKA-LSD--L--PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP-PSLEFIAAGN 182 (454)
T ss_dssp TCCEEECCSSCCSC-CCS--C--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCS
T ss_pred CCcEEECCCCccCc-ccC--C--CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc-ccccEEECcC
Confidence 45555555555552 332 1 1688889999998885 77 58999999999999999985 66544 5899999999
Q ss_pred ccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 150 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
|++++ +| .++++++|+.|++++|++++ +|.. .++|+.|++++|+++ .+|. +.++++|..++
T Consensus 183 n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~-~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~ 243 (454)
T 1jl5_A 183 NQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL-PLSLESIVAGNNILE-ELPE-LQNLPFLTTIY 243 (454)
T ss_dssp SCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC-CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEE
T ss_pred CcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC-cCcccEEECcCCcCC-cccc-cCCCCCCCEEE
Confidence 99986 66 68899999999999999986 3332 368899999999888 6774 77777776654
No 373
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.42 E-value=3.1e-13 Score=145.50 Aligned_cols=124 Identities=23% Similarity=0.163 Sum_probs=83.6
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceeecc
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~ls 148 (635)
.+++.|++++|...+.++ ++.+++|+.|+|++|++++ +| +..+++|+.|++++|++++. +-.-.++|++|+|+
T Consensus 148 ~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls 220 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCS 220 (457)
T ss_dssp TTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECC
T ss_pred CcCCEEECCCCCcccccc---cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECc
Confidence 457778888887666662 6777888888888888885 55 77778888888888888754 31112678888888
Q ss_pred cccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCC----------CCCeEEeecccCcCCCC
Q 006696 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIP----------KLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~----------~L~~l~l~~N~l~~~~p 203 (635)
+|+|++ +| ++.+++|+.|++++|+|++.++. .++ +|+.|++++|.+.|.+|
T Consensus 221 ~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~-~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 221 SNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS-TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp SSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT-TCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred CCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH-HCCCCCEEeccCCCCCEEECCCCccCCccc
Confidence 888875 55 77777888888888887765432 233 34444555555544444
No 374
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.42 E-value=3.2e-13 Score=146.09 Aligned_cols=138 Identities=29% Similarity=0.358 Sum_probs=107.6
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceeecc
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~ls 148 (635)
.+++.|++++|.+++..| ++.+++|+.|+|++|++++ ++ .+..+++|+.|++++|.+++..|-.-.++|++|+|+
T Consensus 199 ~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~ 273 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP---LGILTNLDELSLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 273 (466)
T ss_dssp TTCSEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC
T ss_pred CCCCEEEecCCccccccc---ccccCCCCEEECCCCCccc-ch-hhhcCCCCCEEECCCCccccchhhhcCCCCCEEECC
Confidence 468889999998885433 7778899999999999884 43 688889999999999998876552222789999999
Q ss_pred cccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
+|++++..+ +..+++|+.|+|++|++++..+...+++|+.|+|++|++++..| +..+++|..+
T Consensus 274 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 274 ANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred CCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 999986544 88889999999999999876664578889999999999887655 5555555443
No 375
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.42 E-value=1.6e-13 Score=151.43 Aligned_cols=116 Identities=29% Similarity=0.323 Sum_probs=87.4
Q ss_pred CCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcC
Q 006696 95 ALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQ 172 (635)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 172 (635)
.|+.|+|++|+|++ +|. |++|++|+.|+|++|+|+ .+|..++ ++|+.|+|++|+|++ +| .|++|++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 46678888888884 675 888888888888888888 7787776 788888888888885 66 78888888888888
Q ss_pred CCcccCCC-CCC--CCCCCCeEEeecccCcCCCCcc---cCCCCCCCcc
Q 006696 173 SNNLSGSI-PNF--DIPKLRHLNLSYNGLKGSIPSS---LQKFPNSSFV 215 (635)
Q Consensus 173 ~N~l~~~~-~~~--~l~~L~~l~l~~N~l~~~~p~~---~~~l~~l~~~ 215 (635)
+|+|++.+ |.. .+++|+.|+|++|+|++.+|.. +..+++|..+
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L 565 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 565 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCcc
Confidence 88888775 543 7888888888888888654422 1235555543
No 376
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.41 E-value=3.5e-13 Score=139.77 Aligned_cols=139 Identities=23% Similarity=0.313 Sum_probs=97.2
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceeecc
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~ls 148 (635)
.+++.|++++|.+. .+++ +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++..+-.-.++|++|+|+
T Consensus 177 ~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~ 251 (347)
T 4fmz_A 177 TDLYSLSLNYNQIE-DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIG 251 (347)
T ss_dssp TTCSEEECTTSCCC-CCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECC
T ss_pred CCCCEEEccCCccc-cccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECC
Confidence 46788888888887 4554 7777888888888888875444 77777888888888887754331112677788888
Q ss_pred cccCcccCCchhhccccCCcEEcCCCcccCCCCCC-CCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
+|++++ + +.+..+++|+.|++++|++++. +.. .+++|+.|++++|++++..|..+.++++|..+
T Consensus 252 ~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 252 TNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp SSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred CCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 877774 3 4577777777777777777754 333 67777777777777776666666666666544
No 377
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.40 E-value=2.3e-13 Score=141.09 Aligned_cols=137 Identities=22% Similarity=0.287 Sum_probs=114.8
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
.+++.|++++|.+++ +++ +..+++|++|+|++|++++..+ +..+++|++|++++|.+++. + .+. ++|++|+
T Consensus 199 ~~L~~L~l~~n~l~~-~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~ 271 (347)
T 4fmz_A 199 TSLHYFTAYVNQITD-ITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-N-AVKDLTKLKMLN 271 (347)
T ss_dssp TTCCEEECCSSCCCC-CGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEE
T ss_pred CccceeecccCCCCC-Cch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-h-hHhcCCCcCEEE
Confidence 568899999999984 443 8899999999999999995444 99999999999999999963 3 343 8999999
Q ss_pred cccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
+++|++++. +.+..+++|+.|++++|++++..+.. .+++|+.|+|++|++++..| +..+++|..++
T Consensus 272 l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 339 (347)
T 4fmz_A 272 VGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSAD 339 (347)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEES
T ss_pred ccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceee
Confidence 999999964 46899999999999999999877664 88999999999999997666 66666665543
No 378
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.40 E-value=3.3e-13 Score=140.03 Aligned_cols=105 Identities=27% Similarity=0.351 Sum_probs=83.3
Q ss_pred CceeeEecCCCCeEEEEEeCCC-CccCcCCcccccCCCCCcEEEeec-CCCCCCCCCCCCCCCCCcEEeeccCccCCCCC
Q 006696 58 SWVGINCTQDRTRVFGLRLPGI-GLVGPIPNNTLGKLDALEVLSLRS-NVLTGGLPSEITSLPSLRYLYLQHNNFSGKIP 135 (635)
Q Consensus 58 ~w~gv~c~~~~~~v~~l~l~~~-~l~g~lp~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 135 (635)
+|.+|.|+ ++ +|+ .||. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|
T Consensus 9 ~~~~v~~~------------~~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 9 GSSGLRCT------------RDGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp SSSCEECC------------SSCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred cCCEEEcC------------CCCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 67666665 34 677 5887 99999999999996 99997777889999999999999999998777
Q ss_pred CCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccC
Q 006696 136 SSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 178 (635)
Q Consensus 136 ~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 178 (635)
..|. ++|++|+|++|+|++..+..|..++ |+.|+|.+|.|..
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 7665 7788888888888855555555555 8888888887763
No 379
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.39 E-value=1.5e-12 Score=140.25 Aligned_cols=133 Identities=23% Similarity=0.221 Sum_probs=101.6
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceeecc
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~ls 148 (635)
.+++.|+|++|.+++ +| ++++++|++|+|++|+|++ +| ++++++|++|++++|+..+.++-.-.++|++|+|+
T Consensus 106 ~~L~~L~L~~N~l~~-l~---~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls 178 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD---VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCS 178 (457)
T ss_dssp TTCCEEECCSSCCSC-CC---CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECC
T ss_pred CcCCEEECCCCcCCe-ec---CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccccccCCcCCEEECC
Confidence 578899999999986 54 8899999999999999996 44 78888888888888876666643333788888888
Q ss_pred cccCcccCCchhhccccCCcEEcCCCcccCCCCCCCCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
+|+|++ +| +..+++|+.|++++|+|++. +-..+++|+.|+|++|++++ +| +..+++|..+
T Consensus 179 ~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L 238 (457)
T 3bz5_A 179 FNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYF 238 (457)
T ss_dssp SSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEE
T ss_pred CCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcCCcccc-cC--ccccCCCCEE
Confidence 888885 45 77788888888888888764 44477788888888888876 44 5555555544
No 380
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.37 E-value=9.2e-15 Score=150.96 Aligned_cols=106 Identities=20% Similarity=0.245 Sum_probs=53.2
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCC-CCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceee
Q 006696 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGG-LPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ 146 (635)
+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+.++++|++|+|++|.+++..|..+. ++|++|+
T Consensus 71 ~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred cceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 455555555555544333 34455555555555555543 444455555555555555555544443333 4555555
Q ss_pred cccc-cCccc-CCchhhccccCCcEEcCCC-ccc
Q 006696 147 LSFN-SFTGN-IPQSIQNLTQLTGLSLQSN-NLS 177 (635)
Q Consensus 147 ls~N-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~ 177 (635)
|++| .+++. ++..+.++++|++|+|++| .++
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~ 182 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT 182 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcC
Confidence 5555 34431 4444445555555555555 444
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.33 E-value=2.4e-14 Score=147.78 Aligned_cols=147 Identities=22% Similarity=0.287 Sum_probs=108.8
Q ss_pred CeEEEEEeCCCCccCc-CCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccC-ccCCC-CCCCcC--CCcc
Q 006696 69 TRVFGLRLPGIGLVGP-IPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN-NFSGK-IPSSFS--PQLV 143 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~-lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~~~--~~L~ 143 (635)
.+++.|+|++|.+++. +|. .+..+++|++|+|++|++++..|..++++++|++|+|++| .+++. +|..+. ++|+
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHG-ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp BCCCEEECTTCEECHHHHHH-HHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCEEEccCCCcCHHHHHH-HHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 4678888888888765 665 6788888888888888888777777888888888888888 56642 444333 6788
Q ss_pred eeecccc-cCccc-CCchhhccc-cCCcEEcCCCc--cc-CCCCCC--CCCCCCeEEeeccc-CcCCCCcccCCCCCCCc
Q 006696 144 VLDLSFN-SFTGN-IPQSIQNLT-QLTGLSLQSNN--LS-GSIPNF--DIPKLRHLNLSYNG-LKGSIPSSLQKFPNSSF 214 (635)
Q Consensus 144 ~L~ls~N-~l~~~-~p~~~~~l~-~L~~L~l~~N~--l~-~~~~~~--~l~~L~~l~l~~N~-l~~~~p~~~~~l~~l~~ 214 (635)
+|+|++| ++++. ++..+..++ +|++|+|++|. ++ +.++.. .+++|+.|+|++|. +++..+..+.++++|..
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~ 251 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 251 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCE
Confidence 8888888 88754 677788888 88888888884 44 233332 67888888888888 66666677777777666
Q ss_pred cC
Q 006696 215 VG 216 (635)
Q Consensus 215 ~~ 216 (635)
++
T Consensus 252 L~ 253 (336)
T 2ast_B 252 LS 253 (336)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 382
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.32 E-value=5.9e-12 Score=139.95 Aligned_cols=95 Identities=27% Similarity=0.367 Sum_probs=59.5
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcCCCcceeecc
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~ls 148 (635)
.+++.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. ..++|+.|+|+
T Consensus 61 ~~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~-~l~~L~~L~L~ 129 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA-LPSGLCKLWIF 129 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC----CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC-CCTTCCEEECC
T ss_pred CCCcEEEecCCCCC-CCCC----cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC-CCCCcCEEECC
Confidence 35677777777777 5665 4577777777777777 4664 56677777777777763 444 33556666666
Q ss_pred cccCcccCCchhhccccCCcEEcCCCcccC
Q 006696 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 178 (635)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 178 (635)
+|+|++ +|.. +++|++|+|++|+|++
T Consensus 130 ~N~l~~-lp~~---l~~L~~L~Ls~N~l~~ 155 (622)
T 3g06_A 130 GNQLTS-LPVL---PPGLQELSVSDNQLAS 155 (622)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred CCCCCc-CCCC---CCCCCEEECcCCcCCC
Confidence 666663 4432 2555556666665554
No 383
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.31 E-value=4e-14 Score=149.26 Aligned_cols=148 Identities=20% Similarity=0.300 Sum_probs=101.2
Q ss_pred CeEEEEEeCCC---CccCcCCccc------ccCCCCCcEEEeecCCCCC----CCCCCCCCCCCCcEEeeccCccCCCCC
Q 006696 69 TRVFGLRLPGI---GLVGPIPNNT------LGKLDALEVLSLRSNVLTG----GLPSEITSLPSLRYLYLQHNNFSGKIP 135 (635)
Q Consensus 69 ~~v~~l~l~~~---~l~g~lp~~~------~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p 135 (635)
.+++.|+|++| .+++.+|.+. +..+++|++|+|++|++++ .+|..+.++++|++|+|++|.+++..+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 46777888774 4555666522 3677888888888888876 366677778888888888888764333
Q ss_pred CCcC---------------CCcceeecccccCc-ccCC---chhhccccCCcEEcCCCccc--C---CCC-CC-CCCCCC
Q 006696 136 SSFS---------------PQLVVLDLSFNSFT-GNIP---QSIQNLTQLTGLSLQSNNLS--G---SIP-NF-DIPKLR 189 (635)
Q Consensus 136 ~~~~---------------~~L~~L~ls~N~l~-~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~~-~~-~l~~L~ 189 (635)
..+. ++|++|+|++|+|+ +.+| ..+..+++|+.|+|++|+|+ | ..+ .. .+++|+
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~ 219 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELK 219 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCC
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCcc
Confidence 3332 47888888888886 4444 46677788888888888877 3 233 22 677788
Q ss_pred eEEeecccCc----CCCCcccCCCCCCCccC
Q 006696 190 HLNLSYNGLK----GSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 190 ~l~l~~N~l~----~~~p~~~~~l~~l~~~~ 216 (635)
.|+|++|.++ +.+|..+.++++|..++
T Consensus 220 ~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 220 VLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp EEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred EEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 8888888875 55666666666665553
No 384
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=4.1e-12 Score=131.71 Aligned_cols=102 Identities=20% Similarity=0.168 Sum_probs=90.4
Q ss_pred cEEEeecC-CCCCCCCCCCCCCCCCcEEeecc-CccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcC
Q 006696 97 EVLSLRSN-VLTGGLPSEITSLPSLRYLYLQH-NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQ 172 (635)
Q Consensus 97 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 172 (635)
..+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|..|. ++|++|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35799998 999 6998 99999999999996 999977777776 899999999999999999999999999999999
Q ss_pred CCcccCCCCCC-CCCCCCeEEeecccCcC
Q 006696 173 SNNLSGSIPNF-DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 173 ~N~l~~~~~~~-~l~~L~~l~l~~N~l~~ 200 (635)
+|+|++.++.. ....|+.|+|++|.|..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 99999776654 33349999999999974
No 385
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.26 E-value=2.3e-13 Score=142.08 Aligned_cols=133 Identities=24% Similarity=0.292 Sum_probs=79.0
Q ss_pred eEEEEEeCCCCccCcCCc----ccccCCC-CCcEEEeecCCCCCCCCCCCCCC-----CCCcEEeeccCccCCCCCCCcC
Q 006696 70 RVFGLRLPGIGLVGPIPN----NTLGKLD-ALEVLSLRSNVLTGGLPSEITSL-----PSLRYLYLQHNNFSGKIPSSFS 139 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~ 139 (635)
+++.|+|++|.+++ ++. ..+..++ +|++|+|++|+|++..+..+..+ ++|++|+|++|++++..+..+.
T Consensus 23 ~L~~L~Ls~n~l~~-~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 23 GVTSLDLSLNNLYS-ISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TCCEEECTTSCGGG-SCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CceEEEccCCCCCh-HHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 46677777777663 332 2566666 67777777777765555555554 6677777777777654444222
Q ss_pred -------CCcceeecccccCcccCCchhhc-----cccCCcEEcCCCcccCCCCC----C--CC-CCCCeEEeecccCcC
Q 006696 140 -------PQLVVLDLSFNSFTGNIPQSIQN-----LTQLTGLSLQSNNLSGSIPN----F--DI-PKLRHLNLSYNGLKG 200 (635)
Q Consensus 140 -------~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~~~~----~--~l-~~L~~l~l~~N~l~~ 200 (635)
++|++|+|++|+|++..+..+.. .++|++|+|++|+|++.... . .+ .+|+.|+|++|++++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 35777777777776555544433 24677777777776642221 1 23 267777777777665
Q ss_pred CCC
Q 006696 201 SIP 203 (635)
Q Consensus 201 ~~p 203 (635)
..+
T Consensus 182 ~~~ 184 (362)
T 3goz_A 182 KNC 184 (362)
T ss_dssp SCH
T ss_pred hhH
Confidence 444
No 386
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.26 E-value=2.4e-11 Score=120.60 Aligned_cols=136 Identities=17% Similarity=0.113 Sum_probs=107.1
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeeccc-CCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
..++.|+++.||++... ++.+++|+..... .....+.+|+++++.+..+..+.++++++...+..|+||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 45677788999999855 6889999987532 234568999999999966788889999999888999999999999987
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 006696 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG------------------------------------------- 459 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------------- 459 (635)
+.+.. ......++.+++.+++.||+..
T Consensus 99 ~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 99 EEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 76421 1123467889999999999811
Q ss_pred -------------CCCceecCCCCCCEEEcCCCCeEEeccCCCC
Q 006696 460 -------------GPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 460 -------------~~~ivHrDlk~~NIll~~~~~~ki~DfGla~ 490 (635)
.+.++|+|+++.||+++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1338999999999999876666799998754
No 387
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.25 E-value=2.4e-13 Score=143.23 Aligned_cols=147 Identities=25% Similarity=0.359 Sum_probs=119.1
Q ss_pred CeEEEEEeCCCCccC----cCCcccccCC---------CCCcEEEeecCCCC-CCCC---CCCCCCCCCcEEeeccCccC
Q 006696 69 TRVFGLRLPGIGLVG----PIPNNTLGKL---------DALEVLSLRSNVLT-GGLP---SEITSLPSLRYLYLQHNNFS 131 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g----~lp~~~~~~l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~l~~N~l~ 131 (635)
.+++.|+|++|++++ .++. .+..+ ++|++|+|++|+++ +.+| ..+.++++|++|+|++|+++
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~-~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIAR-ALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHH-HHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred CCCCEEECcCCCCCHHHHHHHHH-HHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 579999999999863 3555 57667 89999999999998 4555 46778999999999999998
Q ss_pred --C---CCCCCcC--CCcceeecccccCc----ccCCchhhccccCCcEEcCCCcccCC----CCC----CCCCCCCeEE
Q 006696 132 --G---KIPSSFS--PQLVVLDLSFNSFT----GNIPQSIQNLTQLTGLSLQSNNLSGS----IPN----FDIPKLRHLN 192 (635)
Q Consensus 132 --~---~~p~~~~--~~L~~L~ls~N~l~----~~~p~~~~~l~~L~~L~l~~N~l~~~----~~~----~~l~~L~~l~ 192 (635)
| .+|..+. ++|++|+|++|+|+ +.+|..+..+++|+.|+|++|+|++. ++. ..+++|+.|+
T Consensus 201 ~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~ 280 (386)
T 2ca6_A 201 PEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLR 280 (386)
T ss_dssp HHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEE
T ss_pred HhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEE
Confidence 3 3444555 78999999999996 67899999999999999999999865 333 2389999999
Q ss_pred eecccCcC----CCCccc-CCCCCCCccC
Q 006696 193 LSYNGLKG----SIPSSL-QKFPNSSFVG 216 (635)
Q Consensus 193 l~~N~l~~----~~p~~~-~~l~~l~~~~ 216 (635)
|++|.+++ .+|..+ .++++|..++
T Consensus 281 L~~n~i~~~g~~~l~~~l~~~l~~L~~L~ 309 (386)
T 2ca6_A 281 LQYNEIELDAVRTLKTVIDEKMPDLLFLE 309 (386)
T ss_dssp CCSSCCBHHHHHHHHHHHHHHCTTCCEEE
T ss_pred CcCCcCCHHHHHHHHHHHHhcCCCceEEE
Confidence 99999997 477766 4566665554
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.23 E-value=6.7e-14 Score=132.98 Aligned_cols=123 Identities=20% Similarity=0.217 Sum_probs=105.0
Q ss_pred ccCCCCCcEEEeecCCCCCCCCC------CCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhh
Q 006696 90 LGKLDALEVLSLRSNVLTGGLPS------EITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ 161 (635)
Q Consensus 90 ~~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~ 161 (635)
+....+++.++|+.|.++|.+|. .+.++++|++|+|++|++++ +| .+. ++|++|+|++|+|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 55677889999999999999887 89999999999999999996 77 665 89999999999999 7899999
Q ss_pred ccccCCcEEcCCCcccCCCCCC-CCCCCCeEEeecccCcCCCC-cccCCCCCCCccC
Q 006696 162 NLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIP-SSLQKFPNSSFVG 216 (635)
Q Consensus 162 ~l~~L~~L~l~~N~l~~~~~~~-~l~~L~~l~l~~N~l~~~~p-~~~~~l~~l~~~~ 216 (635)
.+++|+.|+|++|+|++. |.. .+++|+.|+|++|++++..+ ..+.++++|..++
T Consensus 91 ~~~~L~~L~L~~N~l~~l-~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~ 146 (198)
T 1ds9_A 91 VADTLEELWISYNQIASL-SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLL 146 (198)
T ss_dssp HHHHCSEEEEEEEECCCH-HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEE
T ss_pred cCCcCCEEECcCCcCCcC-CccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEE
Confidence 999999999999999974 443 78899999999999995322 3677777776554
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.23 E-value=8.7e-13 Score=137.73 Aligned_cols=130 Identities=20% Similarity=0.145 Sum_probs=108.3
Q ss_pred EEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCC----CCCCCCC-CCcEEeeccCccCCCCCCCcC-------C
Q 006696 73 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP----SEITSLP-SLRYLYLQHNNFSGKIPSSFS-------P 140 (635)
Q Consensus 73 ~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~p~~~~-------~ 140 (635)
..+|++|+++|.+|. .+....+|++|+|++|+|++..+ ..+.+++ +|++|+|++|++++..+..+. +
T Consensus 2 ~~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 367899999998887 77777889999999999996655 6788898 999999999999976665543 5
Q ss_pred CcceeecccccCcccCCchhhcc-----ccCCcEEcCCCcccCCCCCC------C-CCCCCeEEeecccCcCCCC
Q 006696 141 QLVVLDLSFNSFTGNIPQSIQNL-----TQLTGLSLQSNNLSGSIPNF------D-IPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 141 ~L~~L~ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~~~~------~-l~~L~~l~l~~N~l~~~~p 203 (635)
+|++|+|++|+|++..+..+... ++|+.|+|++|+|++..+.. . .++|+.|+|++|+++..-+
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 155 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSS 155 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHH
Confidence 79999999999998777766554 89999999999998765532 2 3699999999999985443
No 390
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.21 E-value=3.2e-11 Score=125.18 Aligned_cols=139 Identities=14% Similarity=0.125 Sum_probs=107.5
Q ss_pred eEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCC-CCCCCCCCCcEEeeccCccCCCCCCCcC-
Q 006696 62 INCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS- 139 (635)
Q Consensus 62 v~c~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~- 139 (635)
..|+. ..++.++++|+ .||.+ + .++|++|+|++|+|+ .+| ..|.+|++|++|+|++|++.+.+|....
T Consensus 7 C~C~~-----~~v~C~~~~Lt-~iP~~-l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~ 76 (350)
T 4ay9_X 7 CHCSN-----RVFLCQESKVT-EIPSD-L--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFS 76 (350)
T ss_dssp SEEET-----TEEEEESTTCC-SCCTT-C--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBC
T ss_pred cEeeC-----CEEEecCCCCC-ccCcC-c--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhh
Confidence 57764 23678899999 89973 4 478999999999999 555 5799999999999999999888876543
Q ss_pred --CCcc-eeecccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeec-ccCcCCCCcccCCCC
Q 006696 140 --PQLV-VLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSY-NGLKGSIPSSLQKFP 210 (635)
Q Consensus 140 --~~L~-~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~-N~l~~~~p~~~~~l~ 210 (635)
++|+ .+++++|+|+...|..|..+++|++|++++|+|++..+.. ...++..|++.+ |++....+..|..+.
T Consensus 77 ~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 77 NLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred cchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 4444 5778889999888899999999999999999999766544 445666777765 456644444555443
No 391
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.10 E-value=3.5e-10 Score=111.82 Aligned_cols=130 Identities=11% Similarity=0.089 Sum_probs=98.1
Q ss_pred cc-ccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCc-eeceeEEEEeCCceEEEeeeccCCChhc
Q 006696 346 LG-KGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN-VVPLRAYYYSKDEKLLVYDYFASGSLST 423 (635)
Q Consensus 346 iG-~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~n-iv~l~~~~~~~~~~~lv~e~~~~g~L~~ 423 (635)
++ .|..+.||++...+|..+++|..... ....+.+|+++++.+.+|.- +.+++++....+..++||||++|.++.
T Consensus 27 ~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~- 103 (264)
T 1nd4_A 27 QTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL- 103 (264)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT-
T ss_pred cccCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC-
Confidence 44 55569999998777788999997653 33568889999999855522 566888888777889999999998884
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 006696 424 LLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG-------------------------------------------- 459 (635)
Q Consensus 424 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------------- 459 (635)
... .+ ...++.+++..+..||+..
T Consensus 104 -~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 104 -SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp -TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred -cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 211 11 2356778888888888743
Q ss_pred -----------CCCceecCCCCCCEEEcCCCCeEEeccCCCC
Q 006696 460 -----------GPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 460 -----------~~~ivHrDlk~~NIll~~~~~~ki~DfGla~ 490 (635)
.+.++|+|++|.||++++++.+.|+|||.+.
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999887667799999864
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.09 E-value=9.3e-13 Score=142.05 Aligned_cols=148 Identities=20% Similarity=0.092 Sum_probs=114.7
Q ss_pred CeEEEEEeCCCCccCc----CCcccccCCCCCcEEEeecCCCCCC----CCCCCCCCCCCcEEeeccCccCCCCCCCcC-
Q 006696 69 TRVFGLRLPGIGLVGP----IPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSFS- 139 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~----lp~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~- 139 (635)
.+++.|+|++|.+++. +.+..+..+++|++|+|++|++++. ++..+.++++|++|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 5688999999998753 2232445689999999999999854 677788899999999999998754333332
Q ss_pred ------CCcceeecccccCccc----CCchhhccccCCcEEcCCCcccCCCCCC-------CCCCCCeEEeecccCcC--
Q 006696 140 ------PQLVVLDLSFNSFTGN----IPQSIQNLTQLTGLSLQSNNLSGSIPNF-------DIPKLRHLNLSYNGLKG-- 200 (635)
Q Consensus 140 ------~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~~-------~l~~L~~l~l~~N~l~~-- 200 (635)
++|++|+|++|++++. ++..+..+++|+.|+|++|++++..+.. ..++|+.|+|++|.+++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 4899999999999865 5677888899999999999998643321 26789999999999986
Q ss_pred --CCCcccCCCCCCCccC
Q 006696 201 --SIPSSLQKFPNSSFVG 216 (635)
Q Consensus 201 --~~p~~~~~l~~l~~~~ 216 (635)
.+|..+.++++|..++
T Consensus 387 ~~~l~~~l~~~~~L~~L~ 404 (461)
T 1z7x_W 387 CSSLAATLLANHSLRELD 404 (461)
T ss_dssp HHHHHHHHHHCCCCCEEE
T ss_pred HHHHHHHHHhCCCccEEE
Confidence 6777776666665543
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.07 E-value=8.7e-13 Score=142.28 Aligned_cols=136 Identities=20% Similarity=0.214 Sum_probs=107.8
Q ss_pred CeEEEEEeCCCCccCc----CCcccccCCCCCcEEEeecCCCCCCC-----CCCCCCCCCCcEEeeccCccCCC----CC
Q 006696 69 TRVFGLRLPGIGLVGP----IPNNTLGKLDALEVLSLRSNVLTGGL-----PSEITSLPSLRYLYLQHNNFSGK----IP 135 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~----lp~~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~l~~N~l~~~----~p 135 (635)
.+++.|+|++|++++. ++. .+..+++|++|+|++|.+++.- +..+..+++|++|+|++|++++. ++
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCG-IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHH-HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHH-HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 4799999999999863 566 6888999999999999997532 33345689999999999999853 55
Q ss_pred CCcC--CCcceeecccccCcccCCchhhcc-----ccCCcEEcCCCcccCC----CCCC--CCCCCCeEEeecccCcCCC
Q 006696 136 SSFS--PQLVVLDLSFNSFTGNIPQSIQNL-----TQLTGLSLQSNNLSGS----IPNF--DIPKLRHLNLSYNGLKGSI 202 (635)
Q Consensus 136 ~~~~--~~L~~L~ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~----~~~~--~l~~L~~l~l~~N~l~~~~ 202 (635)
..+. ++|++|+|++|++++..+..+... ++|+.|+|++|.+++. ++.. .+++|+.|+|++|++++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 5554 789999999999987666666554 6999999999999865 2222 5789999999999998654
Q ss_pred Ccc
Q 006696 203 PSS 205 (635)
Q Consensus 203 p~~ 205 (635)
+..
T Consensus 358 ~~~ 360 (461)
T 1z7x_W 358 VRE 360 (461)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.06 E-value=6.1e-13 Score=131.02 Aligned_cols=160 Identities=19% Similarity=0.197 Sum_probs=117.3
Q ss_pred CCCCceeeEecCCCCeEEEEEeCC---CCccCcCCcccccCCCCCcEEEeecCCCCCCCC-CCCCCCCCCcE--EeeccC
Q 006696 55 ICQSWVGINCTQDRTRVFGLRLPG---IGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRY--LYLQHN 128 (635)
Q Consensus 55 ~c~~w~gv~c~~~~~~v~~l~l~~---~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~--L~l~~N 128 (635)
.| +|.|+.|..+..+|..+...+ ..+.|.++++.+..|+. .|...+|..++.++ +.+...+.|.. ++++.|
T Consensus 77 l~-~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 77 LK-AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HH-HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HH-hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 35 799999998767887776655 46677777656655554 56666777776665 33666777776 788888
Q ss_pred ccCCCCCCCc------CCCcceeecccccCcc--cCCchhhccccCCcEEcCCCcccCCCCCCCCC--CCCeEEeecccC
Q 006696 129 NFSGKIPSSF------SPQLVVLDLSFNSFTG--NIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIP--KLRHLNLSYNGL 198 (635)
Q Consensus 129 ~l~~~~p~~~------~~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~--~L~~l~l~~N~l 198 (635)
+.. .++..+ .++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.-....+. +|+.|+|++|.+
T Consensus 154 ~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 154 RRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp SHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTT
T ss_pred HHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcC
Confidence 544 333222 1689999999999997 56788889999999999999999752222333 899999999999
Q ss_pred cCCCCc-------ccCCCCCCCccCCC
Q 006696 199 KGSIPS-------SLQKFPNSSFVGNS 218 (635)
Q Consensus 199 ~~~~p~-------~~~~l~~l~~~~n~ 218 (635)
++.+|. .+..+++|..++..
T Consensus 233 ~~~~~~~~~y~~~il~~~P~L~~LDg~ 259 (267)
T 3rw6_A 233 CDTFRDQSTYISAIRERFPKLLRLDGH 259 (267)
T ss_dssp GGGCSSHHHHHHHHHHHCTTCCEESSC
T ss_pred ccccCcchhHHHHHHHHCcccCeECCc
Confidence 987763 36778888888754
No 395
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.00 E-value=1.7e-09 Score=112.40 Aligned_cols=140 Identities=15% Similarity=0.223 Sum_probs=105.1
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEee--ccc--CCHHHHHHHHHHHHhhCC-CCceeceeEEEEeC---CceEEEeee
Q 006696 344 EVLGKGSYGTAYKAVLEESTTVVVKRLK--EVV--VGKRDFEQQMEIVGRVGQ-HPNVVPLRAYYYSK---DEKLLVYDY 415 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~~~~vavK~~~--~~~--~~~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~---~~~~lv~e~ 415 (635)
+.|+.|.++.||+....+ ..+++|+.. ... .....+.+|..+++.+.. +..++++++++.+. ...++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 468899999999998764 678888876 332 234578899999999853 45588888888766 347899999
Q ss_pred ccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 006696 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG------------------------------------ 459 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 459 (635)
++|..+.+.. ...++...+..++.+++..|+.||+..
T Consensus 123 v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9998775422 123778888999999999999999731
Q ss_pred -------------------CCCceecCCCCCCEEEcCCCC--eEEeccCCCCC
Q 006696 460 -------------------GPKFTHGNIKASNVLINQDLD--GCISDFGLTPL 491 (635)
Q Consensus 460 -------------------~~~ivHrDlk~~NIll~~~~~--~ki~DfGla~~ 491 (635)
.+.++|+|+++.||++++++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 245899999999999998754 68999998754
No 396
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.95 E-value=1.3e-09 Score=111.85 Aligned_cols=143 Identities=17% Similarity=0.175 Sum_probs=91.4
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCcc----CCCCCCCc------
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF----SGKIPSSF------ 138 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l----~~~~p~~~------ 138 (635)
.+++.|+|++ +++ .|++.+|.++++|+.|+|++|.++..-+..|.++.+|..+.+..+.. ...-+..|
T Consensus 101 ~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 101 QTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp TTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred CCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 4578888888 777 68888899999999999999888744455666666666555544211 00000000
Q ss_pred ----------------------------------------------CCCcceeecccccCcccCCchhhccccCCcEEcC
Q 006696 139 ----------------------------------------------SPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQ 172 (635)
Q Consensus 139 ----------------------------------------------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 172 (635)
.++|+.|+|++|+++...+.+|.+|++|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 2467777777777775555667777777777777
Q ss_pred CCcccCCCCCC--CCCCCC-eEEeecccCcCCCCcccCCCCCCCcc
Q 006696 173 SNNLSGSIPNF--DIPKLR-HLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 173 ~N~l~~~~~~~--~l~~L~-~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
+| +....+.. .+.+|+ .+++.+ .++..-+..|.++++|+.+
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 77 55322222 667777 777776 5554445667777666554
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.89 E-value=2.6e-11 Score=126.57 Aligned_cols=106 Identities=26% Similarity=0.256 Sum_probs=48.4
Q ss_pred CCCcEEEeecCCCCCCCCCCC-CCCCCCcEEeeccCccCCCCCCCc-------CCCcceeecccccCcc----cCCchhh
Q 006696 94 DALEVLSLRSNVLTGGLPSEI-TSLPSLRYLYLQHNNFSGKIPSSF-------SPQLVVLDLSFNSFTG----NIPQSIQ 161 (635)
Q Consensus 94 ~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~~-------~~~L~~L~ls~N~l~~----~~p~~~~ 161 (635)
.+|+.|+|++|.|+..-...+ ..+++|+.|+|++|.|+......+ .++|++|+|++|+|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 455555555555543211112 234455555555555542211111 1345555555555543 1333344
Q ss_pred ccccCCcEEcCCCcccCCC----CC--CCCCCCCeEEeecccCc
Q 006696 162 NLTQLTGLSLQSNNLSGSI----PN--FDIPKLRHLNLSYNGLK 199 (635)
Q Consensus 162 ~l~~L~~L~l~~N~l~~~~----~~--~~l~~L~~l~l~~N~l~ 199 (635)
.+++|++|+|++|.|+..- +. ...++|+.|+|++|.|+
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 4555555555555554211 11 02345555555555554
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.89 E-value=1.3e-09 Score=112.03 Aligned_cols=131 Identities=13% Similarity=0.166 Sum_probs=95.4
Q ss_pred cCCcccccC--------CCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccC-
Q 006696 84 PIPNNTLGK--------LDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSF- 152 (635)
Q Consensus 84 ~lp~~~~~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l- 152 (635)
.||+..|.+ +++|+.|+|.+ +++..-+.+|.+|++|+.|+|++|.+....+..|. .++..|.++.+..
T Consensus 83 ~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~ 161 (329)
T 3sb4_A 83 FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAY 161 (329)
T ss_dssp EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHH
T ss_pred ccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhh
Confidence 577778888 99999999999 88855557899999999999999999855555565 3455555444221
Q ss_pred ------c-------------------ccCCch---------------------------h-hccccCCcEEcCCCcccCC
Q 006696 153 ------T-------------------GNIPQS---------------------------I-QNLTQLTGLSLQSNNLSGS 179 (635)
Q Consensus 153 ------~-------------------~~~p~~---------------------------~-~~l~~L~~L~l~~N~l~~~ 179 (635)
. +.++.. + ..+++|+.|+|++|+++..
T Consensus 162 ~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I 241 (329)
T 3sb4_A 162 RFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTI 241 (329)
T ss_dssp HTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEE
T ss_pred hccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCccee
Confidence 0 000000 0 1378999999999999954
Q ss_pred CCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCC-ccC
Q 006696 180 IPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS-FVG 216 (635)
Q Consensus 180 ~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~-~~~ 216 (635)
.+.. .+.+|+.|+|.+| ++..-+..|.++++|+ .+.
T Consensus 242 ~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~ 280 (329)
T 3sb4_A 242 PDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLE 280 (329)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEE
Confidence 4443 8999999999998 7756667899999887 543
No 399
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.87 E-value=1e-09 Score=111.32 Aligned_cols=183 Identities=16% Similarity=0.199 Sum_probs=120.0
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCc--eeceeEEEEeCC---ceEEEeeeccC
Q 006696 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN--VVPLRAYYYSKD---EKLLVYDYFAS 418 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~n--iv~l~~~~~~~~---~~~lv~e~~~~ 418 (635)
+.++.|.+..||+.. ..+++|+.... .....+.+|.+++..+..+.. +.+.+......+ ..|+||++++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 357889999999873 56888886432 234678899999988854433 344444433332 34789999999
Q ss_pred CChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 006696 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG--------------------------------------- 459 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--------------------------------------- 459 (635)
..+.+... ..++..++..++.+++..++.||+..
T Consensus 101 ~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 101 VPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp EECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred eECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 88765322 12677788888899999888888621
Q ss_pred ----------------CCCceecCCCCCCEEEcC--CCCeEEeccCCCCCCCCCCCCCCCCcc---cCcccccC-----C
Q 006696 460 ----------------GPKFTHGNIKASNVLINQ--DLDGCISDFGLTPLMNVPATPSRSAGY---RAPEVIET-----R 513 (635)
Q Consensus 460 ----------------~~~ivHrDlk~~NIll~~--~~~~ki~DfGla~~~~~~~~~~~t~~y---~aPE~~~~-----~ 513 (635)
.+.++|+|+++.||++++ ...+.|+||+.+..............+ ..|+.... +
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence 134799999999999998 456789999987654221100000000 12221100 0
Q ss_pred C---------CCCccchHhHHHHHHHHHhCCCCC
Q 006696 514 K---------HSHKSDVYSFGVLLLEMLTGKAPL 538 (635)
Q Consensus 514 ~---------~~~~~DvwS~Gv~l~elltg~~p~ 538 (635)
. .....+.|+++.++|.+.+|..+|
T Consensus 254 ~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 254 HKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0 112358999999999999998776
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.78 E-value=2.5e-11 Score=126.73 Aligned_cols=133 Identities=17% Similarity=0.183 Sum_probs=100.3
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCC-----CCCCCCcEEeeccCccCCC----CCCCcC
Q 006696 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEI-----TSLPSLRYLYLQHNNFSGK----IPSSFS 139 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~----~p~~~~ 139 (635)
.+++.|+|++|+++..-.......+.+|+.|+|++|+|+..-...+ ...++|++|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 5799999999998753333233456789999999999985433333 3568899999999999742 222222
Q ss_pred --CCcceeecccccCccc----CCchhhccccCCcEEcCCCcccCCCC----CC--CCCCCCeEEeecccCcCC
Q 006696 140 --PQLVVLDLSFNSFTGN----IPQSIQNLTQLTGLSLQSNNLSGSIP----NF--DIPKLRHLNLSYNGLKGS 201 (635)
Q Consensus 140 --~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~----~~--~l~~L~~l~l~~N~l~~~ 201 (635)
++|++|+|++|+|++. ++..+..+++|+.|+|++|.|+.... .. ..++|+.|||++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 6899999999999853 35677888999999999999984221 11 468899999999999753
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.60 E-value=1.1e-09 Score=121.91 Aligned_cols=60 Identities=17% Similarity=0.192 Sum_probs=27.1
Q ss_pred CCcceeecccccCcc-cCCchhhccccCCcEEcCCCcccCC-CCCC--CCCCCCeEEeecccCc
Q 006696 140 PQLVVLDLSFNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGS-IPNF--DIPKLRHLNLSYNGLK 199 (635)
Q Consensus 140 ~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~--~l~~L~~l~l~~N~l~ 199 (635)
++|++|+|++|++++ .++..+..+++|++|+|++|.|++. ++.. .+++|+.|+|++|+++
T Consensus 463 ~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 463 PNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp TTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred ccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 345555555555543 2233334445555555555554322 1111 3445555555555544
No 402
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.49 E-value=4.4e-09 Score=116.93 Aligned_cols=141 Identities=16% Similarity=0.105 Sum_probs=89.2
Q ss_pred eEEEEEeCCCC-ccC-cCCcccccCCCCCcEEEeecCCCCCC----CCCCCCCCCCCcEEeeccCccCCCCCCCcC----
Q 006696 70 RVFGLRLPGIG-LVG-PIPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSFS---- 139 (635)
Q Consensus 70 ~v~~l~l~~~~-l~g-~lp~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~---- 139 (635)
+++.|+|++|. ++. .++. ...++++|++|+|++|.+++. ++..+.++++|++|+|++|.+++.-+..+.
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLS-IVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHH-HHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHH-HHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 38888888876 221 1222 345788999999999988755 333456788899999999988743222221
Q ss_pred --CCcceeecccccCcccCCchhhccccCCcEEcCCCcccC---CCCC--CCCCCCCeEEeecccCcCCCCcccCCCCCC
Q 006696 140 --PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG---SIPN--FDIPKLRHLNLSYNGLKGSIPSSLQKFPNS 212 (635)
Q Consensus 140 --~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~---~~~~--~~l~~L~~l~l~~N~l~~~~p~~~~~l~~l 212 (635)
++|++|+|++|.+.+ +|..+.++++|+.|+++++...- ..+. ..+++|+.|+++++... .+|..+..+++|
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L 295 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQI 295 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCC
Confidence 789999999998885 67888888888888887532221 1111 14555666666554322 344444434333
Q ss_pred C
Q 006696 213 S 213 (635)
Q Consensus 213 ~ 213 (635)
.
T Consensus 296 ~ 296 (592)
T 3ogk_B 296 R 296 (592)
T ss_dssp C
T ss_pred c
Confidence 3
No 403
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.48 E-value=5.6e-07 Score=91.71 Aligned_cols=132 Identities=14% Similarity=0.177 Sum_probs=97.2
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCC--C-CceeceeEEEEeCCceEEEeeeccCCC
Q 006696 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQ--H-PNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~--h-~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
+.++.|....||+. +..+++|+..... ....+.+|.+++..+.+ . ..+.+++++ +..++||||++|.+
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 46889999999998 6678888764322 23468899999998843 1 224455544 56789999999988
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG---------------------------------------- 460 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~---------------------------------------- 460 (635)
+.+... ..++..+...++.+++..++.||+...
T Consensus 114 l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 114 ITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred cccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 863321 126677778888888888888885432
Q ss_pred --------------------CCceecCCCCCCEEEcCCCCeEEeccCCCCC
Q 006696 461 --------------------PKFTHGNIKASNVLINQDLDGCISDFGLTPL 491 (635)
Q Consensus 461 --------------------~~ivHrDlk~~NIll~~~~~~ki~DfGla~~ 491 (635)
+.++|+|+++.||+++++..+.|+||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 1249999999999999976679999998754
No 404
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.46 E-value=4.1e-09 Score=98.51 Aligned_cols=111 Identities=14% Similarity=0.191 Sum_probs=72.1
Q ss_pred cccCCCCCcEEEeecC-CCCCC----CCCCCCCCCCCcEEeeccCccCCCCC----CCcC--CCcceeecccccCccc--
Q 006696 89 TLGKLDALEVLSLRSN-VLTGG----LPSEITSLPSLRYLYLQHNNFSGKIP----SSFS--PQLVVLDLSFNSFTGN-- 155 (635)
Q Consensus 89 ~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p----~~~~--~~L~~L~ls~N~l~~~-- 155 (635)
.+...++|++|+|++| .|... +...+...++|++|+|++|.|...-. ..+. ++|++|+|++|+|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4666777888888877 77632 33445566778888888887763211 1111 5688888888887743
Q ss_pred --CCchhhccccCCcEEc--CCCcccCCCC----CC--CCCCCCeEEeecccCc
Q 006696 156 --IPQSIQNLTQLTGLSL--QSNNLSGSIP----NF--DIPKLRHLNLSYNGLK 199 (635)
Q Consensus 156 --~p~~~~~l~~L~~L~l--~~N~l~~~~~----~~--~l~~L~~l~l~~N~l~ 199 (635)
+...+...++|++|+| ++|.|...-. .. ..++|+.|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4556667777888888 7788763211 11 3467888888888774
No 405
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.45 E-value=6.8e-08 Score=94.91 Aligned_cols=100 Identities=24% Similarity=0.348 Sum_probs=55.5
Q ss_pred ccCCCCCcE--EEeecCCCCCCCCC----CCCCCCCCcEEeeccCccCC--CCCCCcC--CCcceeecccccCcccCCch
Q 006696 90 LGKLDALEV--LSLRSNVLTGGLPS----EITSLPSLRYLYLQHNNFSG--KIPSSFS--PQLVVLDLSFNSFTGNIPQS 159 (635)
Q Consensus 90 ~~~l~~L~~--L~L~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~--~~p~~~~--~~L~~L~ls~N~l~~~~p~~ 159 (635)
|...+.|.. ++++.|+.. .++. ...++++|+.|+|++|+|++ .+|..+. ++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 444444544 555666433 2221 11345666666666666665 3333332 5666666666666643 33
Q ss_pred hhccc--cCCcEEcCCCcccCCCCCC---------CCCCCCeEE
Q 006696 160 IQNLT--QLTGLSLQSNNLSGSIPNF---------DIPKLRHLN 192 (635)
Q Consensus 160 ~~~l~--~L~~L~l~~N~l~~~~~~~---------~l~~L~~l~ 192 (635)
+..+. +|++|+|++|.+.+.+|.. .+++|+.||
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 44444 6777777777777665531 466676665
No 406
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.43 E-value=9.4e-07 Score=87.58 Aligned_cols=136 Identities=15% Similarity=0.172 Sum_probs=97.7
Q ss_pred cccccCce-EEEEEEec-CCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 345 VLGKGSYG-TAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 345 ~iG~G~fg-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+..|..| .||+.... ++..+++|+-... ...++.+|...++.+..+--+.++++++.+.+..++|||++++.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 34455554 68988754 4567888886543 24568889999998866656788999999999999999999998776
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 006696 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG------------------------------------------- 459 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------------- 459 (635)
+..... ......++.+++..+..||...
T Consensus 109 ~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 109 QVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 654311 1223345666666666666421
Q ss_pred ------------CCCceecCCCCCCEEEcCCCCeEEeccCCCCC
Q 006696 460 ------------GPKFTHGNIKASNVLINQDLDGCISDFGLTPL 491 (635)
Q Consensus 460 ------------~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~ 491 (635)
.+.++|+|+.+.|||+++++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11278999999999999887778999987653
No 407
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.37 E-value=2.8e-06 Score=85.01 Aligned_cols=74 Identities=15% Similarity=0.198 Sum_probs=58.5
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeeccc-CCHHHHHHHHHHHHhhCCC--CceeceeEEEEeCCceEEEeeeccCCC
Q 006696 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQH--PNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
+.|+.|.++.||++...+|+.+++|+..... .....+.+|++.++.+.++ ..+++++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 4689999999999998889999999965432 2346789999999999432 3577777763 4689999999987
Q ss_pred h
Q 006696 421 L 421 (635)
Q Consensus 421 L 421 (635)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 5
No 408
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.30 E-value=4e-06 Score=84.73 Aligned_cols=136 Identities=18% Similarity=0.208 Sum_probs=93.9
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCC-C-ceeceeEEEE-eCCceEEEeeeccCCC
Q 006696 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH-P-NVVPLRAYYY-SKDEKLLVYDYFASGS 420 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h-~-niv~l~~~~~-~~~~~~lv~e~~~~g~ 420 (635)
+.++.|....||+. +..+++|+-.. ......+.+|.+++..+.+| + .+.+.+.++. ..+..++||||++|..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 35788888899988 56788888532 12245788999999999544 2 3556666664 3445789999999988
Q ss_pred hhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 006696 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG----------------------------------------- 459 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------------- 459 (635)
+.+..- ..++......++.+++..|+.||+..
T Consensus 100 l~~~~~-------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 100 LGEDGM-------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp CHHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred Cchhhh-------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 765321 01445555666666666666666422
Q ss_pred ----------------CCCceecCCCCCCEEEcC---CCC-eEEeccCCCCC
Q 006696 460 ----------------GPKFTHGNIKASNVLINQ---DLD-GCISDFGLTPL 491 (635)
Q Consensus 460 ----------------~~~ivHrDlk~~NIll~~---~~~-~ki~DfGla~~ 491 (635)
.+.++|+|+++.||++++ ++. +.|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 224699999999999997 455 48999997654
No 409
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.27 E-value=1.9e-06 Score=89.23 Aligned_cols=80 Identities=14% Similarity=0.139 Sum_probs=57.0
Q ss_pred ccc-cccCceEEEEEEec-------CCCeEEEEEeeccc---C-CHHHHHHHHHHHHhhCCC--CceeceeEEEEeC---
Q 006696 344 EVL-GKGSYGTAYKAVLE-------ESTTVVVKRLKEVV---V-GKRDFEQQMEIVGRVGQH--PNVVPLRAYYYSK--- 406 (635)
Q Consensus 344 ~~i-G~G~fg~Vy~~~~~-------~~~~vavK~~~~~~---~-~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~--- 406 (635)
+.| +.|....+|+.... ++..+++|+..... . ....+.+|..+++.+..+ -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999998764 25678888765432 1 235678899999888654 3567788877554
Q ss_pred CceEEEeeeccCCChhc
Q 006696 407 DEKLLVYDYFASGSLST 423 (635)
Q Consensus 407 ~~~~lv~e~~~~g~L~~ 423 (635)
...++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 24689999999877764
No 410
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.27 E-value=1.6e-06 Score=91.12 Aligned_cols=122 Identities=15% Similarity=0.181 Sum_probs=68.3
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeec
Q 006696 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~l 147 (635)
.++.+.|++ ++. .|+...|.++.+|+.++|++|+++ .+|......++|+.+.|.+| +...-...|. .+|+.|+|
T Consensus 158 ~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 477777775 565 677777888888888888888777 45543333567777777644 4423333333 45666666
Q ss_pred ccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccC
Q 006696 148 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGL 198 (635)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l 198 (635)
..| ++..-..+|.+ .+|+.+.|. |.++...+.. .+++|+.+++.+|.+
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~ 283 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTF 283 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCC
T ss_pred CCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccc
Confidence 654 33333344444 455555552 3333221211 455555555555544
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.26 E-value=1.2e-08 Score=113.47 Aligned_cols=122 Identities=18% Similarity=0.236 Sum_probs=58.2
Q ss_pred eEEEEEeCCCCccCcCCccccc-CCCCCcEEEeecC-CCCCC-CCCCCCCCCCCcEEeeccCccCCCCCCCcC------C
Q 006696 70 RVFGLRLPGIGLVGPIPNNTLG-KLDALEVLSLRSN-VLTGG-LPSEITSLPSLRYLYLQHNNFSGKIPSSFS------P 140 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~------~ 140 (635)
+++.|+|++|.+++..+. .+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. +
T Consensus 106 ~L~~L~L~~~~~~~~~~~-~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLE-LIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TCCEEEEESCBCCHHHHH-HHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCeEEeeCcEEcHHHHH-HHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 455566666655544433 232 4556666666655 33321 233333556666666666665543332221 3
Q ss_pred Ccceeeccccc--Ccc-cCCchhhccccCCcEEcCCC-cccCCCCCC--CCCCCCeEEe
Q 006696 141 QLVVLDLSFNS--FTG-NIPQSIQNLTQLTGLSLQSN-NLSGSIPNF--DIPKLRHLNL 193 (635)
Q Consensus 141 ~L~~L~ls~N~--l~~-~~p~~~~~l~~L~~L~l~~N-~l~~~~~~~--~l~~L~~l~l 193 (635)
+|++|+|++|. ++. .++..+.++++|+.|+|++| .+.+ ++.. .+++|+.|++
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l 242 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGT 242 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEEC
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEccc
Confidence 56666666654 211 11112233456666666655 3332 2222 4455566653
No 412
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.25 E-value=1.3e-08 Score=113.11 Aligned_cols=106 Identities=18% Similarity=0.109 Sum_probs=58.3
Q ss_pred CCCCCcEEEeecCCCCCCCCCCCC-CCCCCcEEeec--c----CccCCCCCC--C----cC--CCcceeecccccCcccC
Q 006696 92 KLDALEVLSLRSNVLTGGLPSEIT-SLPSLRYLYLQ--H----NNFSGKIPS--S----FS--PQLVVLDLSFNSFTGNI 156 (635)
Q Consensus 92 ~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~--~----N~l~~~~p~--~----~~--~~L~~L~ls~N~l~~~~ 156 (635)
.+++|+.|+++.|++++..+..+. ++++|+.|+|+ + |.+++ .|. . +. ++|++|+|++ .+++..
T Consensus 370 ~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~ 447 (594)
T 2p1m_B 370 GCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL-EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKV 447 (594)
T ss_dssp HCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC-CCTHHHHHHHHHHCTTCCEEECCS-SCCHHH
T ss_pred hchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC-CchhhHHHHHHhhCCCccEEeecC-cccHHH
Confidence 366677776666776654444443 46667777776 3 44442 111 1 11 4566666655 555444
Q ss_pred Cchhhc-cccCCcEEcCCCcccCCCCCC---CCCCCCeEEeecccCc
Q 006696 157 PQSIQN-LTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGLK 199 (635)
Q Consensus 157 p~~~~~-l~~L~~L~l~~N~l~~~~~~~---~l~~L~~l~l~~N~l~ 199 (635)
+..+.. +++|+.|+|++|.+++..... .+++|+.|+|++|.++
T Consensus 448 ~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 448 FEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred HHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 445544 566666666666664322211 3566666666666664
No 413
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.22 E-value=3.4e-06 Score=88.62 Aligned_cols=139 Identities=14% Similarity=0.094 Sum_probs=103.5
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC-CCcceeecc
Q 006696 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS-PQLVVLDLS 148 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~~L~~L~ls 148 (635)
+++.+.|+++ ++ +|+..+|.+ .+|+.++|.+ +++..-+..|.+|++|+.++|++|+++..-...|. .+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECC
T ss_pred CccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeC
Confidence 5778888766 66 788878888 4799999986 77745557899999999999999999843334444 789999998
Q ss_pred cccCcccCCchhhccccCCcEEcCCCcccCCCCCC-CCCCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
.| ++..-..+|.++++|+.+++.+| ++...... .-.+|+.++| .|.++..-...|.++++|..+
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l 276 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELAEV 276 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCCEE
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCccccccccCCccEEEe-CCCccEEChhHhhCCCCCCEE
Confidence 54 77667788999999999999876 44222222 3378999999 455664556788888877655
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.22 E-value=4.8e-08 Score=91.13 Aligned_cols=109 Identities=16% Similarity=0.206 Sum_probs=84.1
Q ss_pred CCeEEEEEeCCC-CccCc----CCcccccCCCCCcEEEeecCCCCCC----CCCCCCCCCCCcEEeeccCccCCC----C
Q 006696 68 RTRVFGLRLPGI-GLVGP----IPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGK----I 134 (635)
Q Consensus 68 ~~~v~~l~l~~~-~l~g~----lp~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~ 134 (635)
...++.|+|++| ++... +.. .+...++|++|+|++|+|... +...+...++|++|+|++|.|... +
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~-~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l 113 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAE-ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 113 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHH-HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHH-HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHH
Confidence 357899999999 87632 333 577789999999999999742 334455668999999999999842 2
Q ss_pred CCCcC--CCcceeec--ccccCccc----CCchhhccccCCcEEcCCCccc
Q 006696 135 PSSFS--PQLVVLDL--SFNSFTGN----IPQSIQNLTQLTGLSLQSNNLS 177 (635)
Q Consensus 135 p~~~~--~~L~~L~l--s~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 177 (635)
...+. ++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 114 ~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 114 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 33333 68999999 88999854 4456667799999999999986
No 415
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.19 E-value=6.6e-06 Score=85.19 Aligned_cols=74 Identities=8% Similarity=-0.024 Sum_probs=55.1
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCC-CceeceeEEEEeC-CceEEEeeeccCCCh
Q 006696 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH-PNVVPLRAYYYSK-DEKLLVYDYFASGSL 421 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h-~niv~l~~~~~~~-~~~~lv~e~~~~g~L 421 (635)
+.++.|....+|+... ++..+++|..... ..+..|..++..+..+ -.+.++++++... ...++||||++|..+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 4578899999999886 4778888877432 3688999999988543 2256677776654 567999999998665
Q ss_pred h
Q 006696 422 S 422 (635)
Q Consensus 422 ~ 422 (635)
.
T Consensus 122 ~ 122 (362)
T 3ovc_A 122 Q 122 (362)
T ss_dssp T
T ss_pred c
Confidence 4
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.14 E-value=5.2e-07 Score=93.27 Aligned_cols=38 Identities=18% Similarity=0.199 Sum_probs=17.4
Q ss_pred CCcceeecccccCcccCCchhh---ccccCCcEEcCCCccc
Q 006696 140 PQLVVLDLSFNSFTGNIPQSIQ---NLTQLTGLSLQSNNLS 177 (635)
Q Consensus 140 ~~L~~L~ls~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~ 177 (635)
++|++|+|++|.+.+..+..+. .+++|+.|+|+.|.|.
T Consensus 252 p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~ 292 (362)
T 2ra8_A 252 PNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLT 292 (362)
T ss_dssp TTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCB
T ss_pred CCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCC
Confidence 4455555555555433322222 2444555555555544
No 417
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.99 E-value=5e-07 Score=93.38 Aligned_cols=144 Identities=15% Similarity=0.213 Sum_probs=90.9
Q ss_pred CeEEEEEeCCCCc---------cCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCc-
Q 006696 69 TRVFGLRLPGIGL---------VGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSF- 138 (635)
Q Consensus 69 ~~v~~l~l~~~~l---------~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~- 138 (635)
.++..|.+..+.. .+.++. .+..+++|+.|+|++|.-. .+|. + .+++|+.|+|..|.++......+
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~-ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSP-VLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHH-HHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHH-HHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHH
Confidence 3677787765432 123444 5678899999999988312 3443 4 38899999999888763222222
Q ss_pred ---CCCcceeeccc--ccCccc-----CCchh--hccccCCcEEcCCCcccCCCCC-----CCCCCCCeEEeecccCcCC
Q 006696 139 ---SPQLVVLDLSF--NSFTGN-----IPQSI--QNLTQLTGLSLQSNNLSGSIPN-----FDIPKLRHLNLSYNGLKGS 201 (635)
Q Consensus 139 ---~~~L~~L~ls~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~~~~~~-----~~l~~L~~l~l~~N~l~~~ 201 (635)
.++|++|+|+. |...+. +...+ ..+++|+.|+|++|.+....+. ..+++|+.|+|+.|.+...
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 26899999864 332221 11122 3578999999999998743221 1478899999999998752
Q ss_pred ----CCcccCCCCCCCccC
Q 006696 202 ----IPSSLQKFPNSSFVG 216 (635)
Q Consensus 202 ----~p~~~~~l~~l~~~~ 216 (635)
++..+.++++|..++
T Consensus 295 G~~~L~~~L~~l~~L~~L~ 313 (362)
T 2ra8_A 295 GARLLLDHVDKIKHLKFIN 313 (362)
T ss_dssp HHHHHHTTHHHHTTCSEEE
T ss_pred HHHHHHhhcccCCcceEEE
Confidence 333334455555554
No 418
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.91 E-value=7.3e-05 Score=75.37 Aligned_cols=140 Identities=17% Similarity=0.154 Sum_probs=91.6
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCC--CceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH--PNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
+.|+.|.+..+|+.... +..+++|+.... ....+..|.+.++.+..+ ..+++.++++...+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 35788999999999864 678888887543 256788999998888543 6688888888878889999999998765
Q ss_pred hc-----------cccCCCC-C----------------CCCCCCHHHHH---HHHH----------------HHHHH-HH
Q 006696 422 ST-----------LLHGNRG-A----------------GRTPLDWETRV---KILL----------------GTARG-VA 453 (635)
Q Consensus 422 ~~-----------~l~~~~~-~----------------~~~~l~~~~~~---~i~~----------------~ia~~-l~ 453 (635)
.. .+|.... . +...-+|.... ++.. .+... ..
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 21 1222111 0 00012454321 1111 11111 12
Q ss_pred HHHh-cCCCCceecCCCCCCEEEcCCCCeEEeccC
Q 006696 454 HIHS-MGGPKFTHGNIKASNVLINQDLDGCISDFG 487 (635)
Q Consensus 454 ~LH~-~~~~~ivHrDlk~~NIll~~~~~~ki~DfG 487 (635)
.|.. ...+.++|+|+.+.|++++.++ +.|+||.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 3321 2246699999999999999887 8899974
No 419
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.86 E-value=4.9e-05 Score=77.76 Aligned_cols=142 Identities=14% Similarity=0.196 Sum_probs=79.1
Q ss_pred cccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCC-CceeceeE------EEEeCCceEEEeeecc
Q 006696 345 VLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH-PNVVPLRA------YYYSKDEKLLVYDYFA 417 (635)
Q Consensus 345 ~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h-~niv~l~~------~~~~~~~~~lv~e~~~ 417 (635)
.|+.|..+.||+....++ .+++|+... .......|..++..+..+ -.+.+++. +....+..+++|+|++
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~ 114 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHR---PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIE 114 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECS---CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCC---CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeec
Confidence 466677899999987654 588888865 234455566666555321 12333332 1234567789999999
Q ss_pred CCChhc--------------cccCCCC-C----C----CCCCCHHHH-------------------------------HH
Q 006696 418 SGSLST--------------LLHGNRG-A----G----RTPLDWETR-------------------------------VK 443 (635)
Q Consensus 418 ~g~L~~--------------~l~~~~~-~----~----~~~l~~~~~-------------------------------~~ 443 (635)
|..+.. .+|.... . . ...-.|... ..
T Consensus 115 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (346)
T 2q83_A 115 GRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDG 194 (346)
T ss_dssp CBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 865430 1111000 0 0 001123211 01
Q ss_pred HHHHHHHHHHHHHh----------cCCCCceecCCCCCCEEEcCCCCeEEeccCCCC
Q 006696 444 ILLGTARGVAHIHS----------MGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 444 i~~~ia~~l~~LH~----------~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~ 490 (635)
+...+..++++|++ ...+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 195 FIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11123345666653 123459999999999999888899999998754
No 420
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.85 E-value=2.6e-05 Score=81.79 Aligned_cols=74 Identities=12% Similarity=0.194 Sum_probs=49.4
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeeccc--------CCHHHHHHHHHHHHhhCCC-Cc-eeceeEEEEeCCceEEE
Q 006696 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV--------VGKRDFEQQMEIVGRVGQH-PN-VVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~e~~~l~~l~~h-~n-iv~l~~~~~~~~~~~lv 412 (635)
+.||.|.++.||++... +++.+++|...... .....+..|.+++..+..+ +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999754 46789999764321 1234567888888887443 33 3455543 45567899
Q ss_pred eeeccCC
Q 006696 413 YDYFASG 419 (635)
Q Consensus 413 ~e~~~~g 419 (635)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.68 E-value=0.00029 Score=70.20 Aligned_cols=74 Identities=16% Similarity=0.204 Sum_probs=54.2
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccC-CHHHHHHHHHHHHhhCCCC--ceeceeEEEEeCCceEEEeeeccCCC
Q 006696 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHP--NVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~--niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
+.+|.|..+.||+....+|+.|++|+-..... ....++.|...|+.+.+.. .+++.+++ +..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 45899999999999999999999998764432 2456889999999885432 24445543 23478999988764
Q ss_pred h
Q 006696 421 L 421 (635)
Q Consensus 421 L 421 (635)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 3
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.55 E-value=0.0001 Score=63.97 Aligned_cols=57 Identities=19% Similarity=0.251 Sum_probs=44.9
Q ss_pred cEEeeccCccC-CCCCCCcCCCcceeecccccCcccCCchhhccccCCcEEcCCCccc
Q 006696 121 RYLYLQHNNFS-GKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLS 177 (635)
Q Consensus 121 ~~L~l~~N~l~-~~~p~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 177 (635)
..++.+++.++ ..+|..+..+|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36777777776 4677777788888999999988666667888888888888888765
No 423
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.48 E-value=0.00057 Score=68.56 Aligned_cols=71 Identities=6% Similarity=-0.011 Sum_probs=44.6
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeec-cCCCh
Q 006696 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF-ASGSL 421 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~-~~g~L 421 (635)
+.|+.|....+|+. ..+++|+.........+..+|..+++.+..+.-..++++. +.+.-++|+||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 46888999999999 5688888764322222345678777777444333455544 344567899999 55444
No 424
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.47 E-value=0.00035 Score=73.78 Aligned_cols=73 Identities=12% Similarity=0.089 Sum_probs=45.7
Q ss_pred CCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCCCCC-----CCCcccCcccccCCC---CCCccchHhHHHHHHHHH
Q 006696 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS-----RSAGYRAPEVIETRK---HSHKSDVYSFGVLLLEML 532 (635)
Q Consensus 461 ~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~~~~-----~t~~y~aPE~~~~~~---~~~~~DvwS~Gv~l~ell 532 (635)
+.++|+|+++.|||+++++ ++|+||+.+.......... -...|.+|+...... .....++......+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 4599999999999999876 9999999876532110000 012255665543211 112345567788888877
Q ss_pred hC
Q 006696 533 TG 534 (635)
Q Consensus 533 tg 534 (635)
++
T Consensus 311 ~~ 312 (420)
T 2pyw_A 311 NK 312 (420)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.42 E-value=3.1e-05 Score=70.50 Aligned_cols=81 Identities=7% Similarity=0.063 Sum_probs=46.2
Q ss_pred CCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCc-cCCCCCCCc------CCCcceeeccccc-CcccCCchhhccccC
Q 006696 95 ALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN-FSGKIPSSF------SPQLVVLDLSFNS-FTGNIPQSIQNLTQL 166 (635)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~------~~~L~~L~ls~N~-l~~~~p~~~~~l~~L 166 (635)
+|+.|||+++.++..--..+.++++|+.|+|+++. ++..-=..+ .++|++|+|++|. |+..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 57777777777664333445677777777777764 441100011 1247777777763 654333445666667
Q ss_pred CcEEcCCCc
Q 006696 167 TGLSLQSNN 175 (635)
Q Consensus 167 ~~L~l~~N~ 175 (635)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777766653
No 426
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.37 E-value=0.0012 Score=67.04 Aligned_cols=144 Identities=15% Similarity=0.106 Sum_probs=82.5
Q ss_pred cccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCC-ceeceeEE-----EEeCCceEEEeeeccC
Q 006696 345 VLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-NVVPLRAY-----YYSKDEKLLVYDYFAS 418 (635)
Q Consensus 345 ~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~-----~~~~~~~~lv~e~~~~ 418 (635)
.++ |....||+....+|+.+++|...........+..|..++..+..+. .+++++.. ....+..+++|+|++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 355 7778999988777778999998754445667778888888774332 24444432 1224456789999987
Q ss_pred CChhc--------------cccCC----CCCCCCCCCHHHH----HHH---------------HHHHHHHHHHHHhc---
Q 006696 419 GSLST--------------LLHGN----RGAGRTPLDWETR----VKI---------------LLGTARGVAHIHSM--- 458 (635)
Q Consensus 419 g~L~~--------------~l~~~----~~~~~~~l~~~~~----~~i---------------~~~ia~~l~~LH~~--- 458 (635)
..+.. .+|.. ........++... ..+ ...+...++.+.+.
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 54321 01110 0000111222211 001 01111223333221
Q ss_pred -CCCCceecCCCCCCEEEcCCCCeEEeccCCCCC
Q 006696 459 -GGPKFTHGNIKASNVLINQDLDGCISDFGLTPL 491 (635)
Q Consensus 459 -~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~ 491 (635)
..+.++|+|+++.||+++ + .+.|+||+.+..
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 223479999999999999 4 899999987653
No 427
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.20 E-value=0.0012 Score=68.43 Aligned_cols=143 Identities=15% Similarity=0.210 Sum_probs=83.9
Q ss_pred ccccccCceEEEEEEecC--------CCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeee
Q 006696 344 EVLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
+.|..|....+|+....+ ++.+++|+.-..........+|..+++.+..+.-..++++.+.+ .+||||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 346667778899998642 46788888644333456677899999888666555677766533 399999
Q ss_pred ccCCChhcc-----------------ccCCC-CCCCCCC-CHHHHHHHHHHHHH-------------------HHHHH--
Q 006696 416 FASGSLSTL-----------------LHGNR-GAGRTPL-DWETRVKILLGTAR-------------------GVAHI-- 455 (635)
Q Consensus 416 ~~~g~L~~~-----------------l~~~~-~~~~~~l-~~~~~~~i~~~ia~-------------------~l~~L-- 455 (635)
++|..|..- +|... ...+.+. -+.++.++..++.. .+..|
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 998655321 11111 0011111 24455555444321 22333
Q ss_pred --HhcC-CCCceecCCCCCCEEEcCC----CCeEEeccCCCC
Q 006696 456 --HSMG-GPKFTHGNIKASNVLINQD----LDGCISDFGLTP 490 (635)
Q Consensus 456 --H~~~-~~~ivHrDlk~~NIll~~~----~~~ki~DfGla~ 490 (635)
.... ...++|+|+.+.||+++++ +.+.++||..+.
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2222 2348999999999999887 789999998764
No 428
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.16 E-value=0.0018 Score=68.86 Aligned_cols=74 Identities=7% Similarity=0.050 Sum_probs=48.2
Q ss_pred ccccccCceEEEEEEecC-CCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeeccCCCh
Q 006696 344 EVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
+.|+.|-...+|+....+ +..+++|+........-+..+|..++..+..+.-..++++.+. + .+||||+++-.|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 457778889999998765 4678888764332212233688889998865554567777662 2 359999987544
No 429
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.13 E-value=0.00087 Score=70.81 Aligned_cols=73 Identities=12% Similarity=0.102 Sum_probs=50.0
Q ss_pred ccccccCceEEEEEEecC--------CCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeee
Q 006696 344 EVLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
+.|+.|....+|++...+ +..+++|+.... .....+.+|..++..+..+.-..++++.+. + .+|+||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e~ 153 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEY 153 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEEE
Confidence 457778889999998753 467888887432 122456678888888865544566776543 2 389999
Q ss_pred ccCCCh
Q 006696 416 FASGSL 421 (635)
Q Consensus 416 ~~~g~L 421 (635)
++|..+
T Consensus 154 l~G~~l 159 (429)
T 1nw1_A 154 IPSRPL 159 (429)
T ss_dssp CCEEEC
T ss_pred eCCccc
Confidence 986444
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.13 E-value=0.0026 Score=64.16 Aligned_cols=145 Identities=10% Similarity=0.093 Sum_probs=79.2
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCC-ceeceeEE------EEeCCceEEEeeec
Q 006696 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-NVVPLRAY------YYSKDEKLLVYDYF 416 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~------~~~~~~~~lv~e~~ 416 (635)
+.|+.|....+|+....++ .+++|..... ....++..|..++..+..+. .+.+++.. ....+..+++++|+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 3467788889999987655 6788887652 22345667888777764331 13333321 12345678999999
Q ss_pred cCCChhcc--------------ccCCC-C--CCC-CC---CCHHHHHH------------HHHHHHHHHHHHHhc----C
Q 006696 417 ASGSLSTL--------------LHGNR-G--AGR-TP---LDWETRVK------------ILLGTARGVAHIHSM----G 459 (635)
Q Consensus 417 ~~g~L~~~--------------l~~~~-~--~~~-~~---l~~~~~~~------------i~~~ia~~l~~LH~~----~ 459 (635)
+|..+... +|... . ... .. ..|..... +...+...++++++. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 88654220 11100 0 000 00 11222110 001133445555532 1
Q ss_pred CCCceecCCCCCCEEEcCCCCeEEeccCCCC
Q 006696 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 460 ~~~ivHrDlk~~NIll~~~~~~ki~DfGla~ 490 (635)
.+.++|+|+.+.||+++++..+.|+||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 2348999999999999987666899998654
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.08 E-value=0.0011 Score=67.54 Aligned_cols=143 Identities=15% Similarity=0.098 Sum_probs=72.2
Q ss_pred cccccCceE-EEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCCC-ceeceeEEEEeCCceEEEeeeccCCChh
Q 006696 345 VLGKGSYGT-AYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-NVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 345 ~iG~G~fg~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.|+.|+... +|+....++..+++|...... ..++..|+.++..+..+. .+.+++.+. .+.-+++||++.+..+.
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d--~~~g~ll~e~l~~~~l~ 100 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEE--HARGLLLIEDLGDALFT 100 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEE--TTTTEEEECCCCSCBHH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeec--CCCCEEEEeeCCCcchH
Confidence 355554444 667765446677776544321 134556777777764442 355666653 23337899998776665
Q ss_pred ccccCCC---------------------CCCCCCCCHHHHH-------HH-------------HHHHHHHHHHHH---hc
Q 006696 423 TLLHGNR---------------------GAGRTPLDWETRV-------KI-------------LLGTARGVAHIH---SM 458 (635)
Q Consensus 423 ~~l~~~~---------------------~~~~~~l~~~~~~-------~i-------------~~~ia~~l~~LH---~~ 458 (635)
+++.... ......++..... .+ ...+...++.+. ..
T Consensus 101 ~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~ 180 (333)
T 3csv_A 101 EVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLE 180 (333)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccc
Confidence 4332110 0001112211100 00 001112222221 11
Q ss_pred CCCCceecCCCCCCEEEcCC----CCeEEeccCCCCC
Q 006696 459 GGPKFTHGNIKASNVLINQD----LDGCISDFGLTPL 491 (635)
Q Consensus 459 ~~~~ivHrDlk~~NIll~~~----~~~ki~DfGla~~ 491 (635)
..+.++|+|+.+.|||++.+ +.+.|+||+.+..
T Consensus 181 ~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 181 GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp SCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 23459999999999999875 6789999998754
No 432
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.93 E-value=0.0019 Score=66.78 Aligned_cols=74 Identities=12% Similarity=0.112 Sum_probs=44.6
Q ss_pred ccccccCceEEEEEEecC---------CCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEee
Q 006696 344 EVLGKGSYGTAYKAVLEE---------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
+.|+.|....+|+....+ +..+++|+.........+...|.+++..+..+.-+.++++.. .-++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec----CCcEEEE
Confidence 357778888999998654 267888876543211123467888888775554345666543 2378999
Q ss_pred eccCCCh
Q 006696 415 YFASGSL 421 (635)
Q Consensus 415 ~~~~g~L 421 (635)
|++|..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987544
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.85 E-value=8.2e-05 Score=69.04 Aligned_cols=85 Identities=13% Similarity=0.135 Sum_probs=48.2
Q ss_pred ccCCCCCcEEEeecC-CCCCC----CCCCCCCCCCCcEEeeccCccCCCCCCCcC------CCcceeecccccCccc---
Q 006696 90 LGKLDALEVLSLRSN-VLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSFS------PQLVVLDLSFNSFTGN--- 155 (635)
Q Consensus 90 ~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~------~~L~~L~ls~N~l~~~--- 155 (635)
+.+=+.|+.|+|++| +|... +-+.+..=+.|+.|+|++|+|...--..+. +.|++|+|++|.|+..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 444566777777764 66421 223344456677777777777632222222 5677777777777643
Q ss_pred -CCchhhccccCCcEEcCCC
Q 006696 156 -IPQSIQNLTQLTGLSLQSN 174 (635)
Q Consensus 156 -~p~~~~~l~~L~~L~l~~N 174 (635)
+-.++..-+.|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 2233444455777777654
No 434
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.83 E-value=0.00037 Score=63.42 Aligned_cols=87 Identities=10% Similarity=0.043 Sum_probs=58.6
Q ss_pred CCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeeccccc-CcccCCchhhcc----ccCCcEEcCCCc-ccC--CC
Q 006696 111 PSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNS-FTGNIPQSIQNL----TQLTGLSLQSNN-LSG--SI 180 (635)
Q Consensus 111 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~--~~ 180 (635)
|.....--+|+.|||+++.++..--..+. ++|++|+|++|. |+..--..+..+ ++|+.|+|+++. |+. ..
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 43332335799999999988743222222 789999999995 775433445553 469999999974 662 11
Q ss_pred CCCCCCCCCeEEeeccc
Q 006696 181 PNFDIPKLRHLNLSYNG 197 (635)
Q Consensus 181 ~~~~l~~L~~l~l~~N~ 197 (635)
.-..+++|+.|+|+++.
T Consensus 134 ~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 134 ALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HGGGCTTCCEEEEESCT
T ss_pred HHhcCCCCCEEECCCCC
Confidence 11267899999999875
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.76 E-value=0.0026 Score=54.93 Aligned_cols=56 Identities=27% Similarity=0.291 Sum_probs=41.5
Q ss_pred EEEeCCCCcc-CcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccC
Q 006696 73 GLRLPGIGLV-GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFS 131 (635)
Q Consensus 73 ~l~l~~~~l~-g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 131 (635)
.++.++++|+ ..+|.+ + -.+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~-l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA-F--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSC-C--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCC-C--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6788888886 457752 2 246889999999998444456788888888888888765
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.74 E-value=9e-05 Score=68.78 Aligned_cols=109 Identities=13% Similarity=0.194 Sum_probs=74.9
Q ss_pred CCeEEEEEeCCC-CccC----cCCcccccCCCCCcEEEeecCCCCCCCCCC----CCCCCCCcEEeeccCccCCCCCCC-
Q 006696 68 RTRVFGLRLPGI-GLVG----PIPNNTLGKLDALEVLSLRSNVLTGGLPSE----ITSLPSLRYLYLQHNNFSGKIPSS- 137 (635)
Q Consensus 68 ~~~v~~l~l~~~-~l~g----~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~~~~p~~- 137 (635)
...++.|+|++| ++.. .|-+ .+..=+.|+.|+|++|+|...--.. +..=+.|+.|+|++|.|...--..
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~-aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIE-AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHH-HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHH-HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 467899999986 6542 1333 4667789999999999998432223 334578999999999998422111
Q ss_pred ---cC--CCcceeecccc---cCcc----cCCchhhccccCCcEEcCCCccc
Q 006696 138 ---FS--PQLVVLDLSFN---SFTG----NIPQSIQNLTQLTGLSLQSNNLS 177 (635)
Q Consensus 138 ---~~--~~L~~L~ls~N---~l~~----~~p~~~~~l~~L~~L~l~~N~l~ 177 (635)
+. ..|++|+|++| .|.. .+...+..-+.|+.|+++.|.+.
T Consensus 119 a~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 22 57999999976 3442 24455666678888888877654
No 437
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.69 E-value=0.004 Score=64.94 Aligned_cols=136 Identities=15% Similarity=0.091 Sum_probs=69.5
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeec
Q 006696 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~l 147 (635)
.++.+.++.. ++ .+....+.+..+|+.+.+..|..+ .-...|.++..|+.+.+..+.+. ...|. .+|+.+.+
T Consensus 231 ~l~~i~ip~~-~~-~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l 304 (394)
T 4fs7_A 231 GVKNIIIPDS-FT-ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKL 304 (394)
T ss_dssp CCCEEEECTT-CC-EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEE
T ss_pred CCceEEECCC-ce-ecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccccccccc
Confidence 4556666543 23 455556777777777777766544 33455666666666665554322 11121 45555555
Q ss_pred ccccCcccCCchhhccccCCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCc
Q 006696 148 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 214 (635)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~ 214 (635)
..| ++..-..+|.++.+|+.++|.++ ++..-... ++.+|+.+++..| ++..-...|.++.+|+.
T Consensus 305 ~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 370 (394)
T 4fs7_A 305 LDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKK 370 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCE
T ss_pred ccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCE
Confidence 443 44333445556666666665433 33111111 4555666665544 43233345555555543
No 438
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.67 E-value=0.0084 Score=61.07 Aligned_cols=69 Identities=16% Similarity=0.140 Sum_probs=43.5
Q ss_pred cccCceEEEEEEecCCCeEEEEEeecccCCHHHHHHHHHHHHhhCCC--CceeceeEE------EEeCCceEEEeeeccC
Q 006696 347 GKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH--PNVVPLRAY------YYSKDEKLLVYDYFAS 418 (635)
Q Consensus 347 G~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h--~niv~l~~~------~~~~~~~~lv~e~~~~ 418 (635)
|.|....||+....++ .+++|+...... ..|..++..+..+ +++++.+.. ....+..++||+|++|
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~-----~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD-----EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC-----CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc-----hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 4444679999987766 899998765432 3455566555322 224444432 2334667899999998
Q ss_pred CCh
Q 006696 419 GSL 421 (635)
Q Consensus 419 g~L 421 (635)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 765
No 439
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.64 E-value=0.0028 Score=66.07 Aligned_cols=111 Identities=15% Similarity=0.228 Sum_probs=76.8
Q ss_pred cCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhh
Q 006696 84 PIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ 161 (635)
Q Consensus 84 ~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~ 161 (635)
.+...+|.+..+|+.+.+..+..+ .-...|.++++|+.+.+. +.++..-...|. .+|+.++|..| ++..-..+|.
T Consensus 255 ~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 331 (394)
T 4gt6_A 255 RIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFA 331 (394)
T ss_dssp EECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred EcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhh
Confidence 345557888888888888766544 445678888888888886 445523333443 67888888765 6645567888
Q ss_pred ccccCCcEEcCCCcccCCCCCC---CCCCCCeEEeecccCc
Q 006696 162 NLTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGLK 199 (635)
Q Consensus 162 ~l~~L~~L~l~~N~l~~~~~~~---~l~~L~~l~l~~N~l~ 199 (635)
+|.+|+.+.|.++ ++ .+... ++.+|+.+++.+|...
T Consensus 332 ~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 332 GCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp TCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHHH
T ss_pred CCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCceee
Confidence 8888888888655 54 33332 7888888888887543
No 440
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.48 E-value=0.0087 Score=61.86 Aligned_cols=125 Identities=14% Similarity=0.091 Sum_probs=80.7
Q ss_pred ccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhcccc
Q 006696 88 NTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQ 165 (635)
Q Consensus 88 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~ 165 (635)
..+....+|+.+.+..+ +...-...+.++++|+.+.+..+ ++..-...|. .+|+.+.+..+ +.......|.++++
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 35677778888887655 44244466788888888888766 4422233333 56888887644 55355567888888
Q ss_pred CCcEEcCCCcccCCCCCC--CCCCCCeEEeecccCcCCCCcccCCCCCCCccC
Q 006696 166 LTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 166 L~~L~l~~N~l~~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~~ 216 (635)
|+.+.+.+|.++...... ++.+|+.++|..+ ++..-...|.++++|+.+.
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 339 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTIS 339 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCC
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEE
Confidence 888888888777333332 6788888888654 5433345677777666543
No 441
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.48 E-value=0.0046 Score=64.42 Aligned_cols=100 Identities=12% Similarity=0.152 Sum_probs=62.0
Q ss_pred CCCCCCCCCCcEEeeccCccCCCCCCCcC--CCcceeecccccCcccCCchhhccccCCcEEcCCCcccCCCCC-C--CC
Q 006696 111 PSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN-F--DI 185 (635)
Q Consensus 111 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~--~l 185 (635)
...|.++++|+.+.+.++..+ .-...|. .+|+.+.+. +.++..-..+|.+|.+|+.+.|.+| ++ .+.. . ++
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C 333 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGC 333 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTC
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCC
Confidence 456777788888877665443 2233333 677777775 4555455567778888888887655 43 2222 2 67
Q ss_pred CCCCeEEeecccCcCCCCcccCCCCCCCcc
Q 006696 186 PKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 186 ~~L~~l~l~~N~l~~~~p~~~~~l~~l~~~ 215 (635)
.+|+.+.|..+ ++..-...|.++++|+.+
T Consensus 334 ~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 334 EQLERIAIPSS-VTKIPESAFSNCTALNNI 362 (394)
T ss_dssp TTCCEEEECTT-CCBCCGGGGTTCTTCCEE
T ss_pred CCCCEEEECcc-cCEEhHhHhhCCCCCCEE
Confidence 77888888544 553334567777766544
No 442
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.45 E-value=0.0084 Score=62.41 Aligned_cols=54 Identities=19% Similarity=0.143 Sum_probs=25.7
Q ss_pred CchhhccccCCcEEcCCCcccCCCCC-C--CCCCCCeEEeecccCcCCCCcccCCCCCCC
Q 006696 157 PQSIQNLTQLTGLSLQSNNLSGSIPN-F--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 213 (635)
Q Consensus 157 p~~~~~l~~L~~L~l~~N~l~~~~~~-~--~l~~L~~l~l~~N~l~~~~p~~~~~l~~l~ 213 (635)
..+|.++++|+.+.+.++..+ ++. . .+.+|+.+++..| ++..-...|.++..|.
T Consensus 155 ~~aF~~c~~L~~i~l~~~~~~--I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~ 211 (394)
T 4fs7_A 155 DEAFATCESLEYVSLPDSMET--LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLE 211 (394)
T ss_dssp TTTTTTCTTCCEEECCTTCCE--ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCC
T ss_pred hhhhcccCCCcEEecCCccce--eccccccCCCCceEEEcCCC-ceEeCchhhccccccc
Confidence 345666666666666544322 222 1 4556666666554 2222233444444443
No 443
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.19 E-value=0.031 Score=52.08 Aligned_cols=102 Identities=12% Similarity=0.066 Sum_probs=66.5
Q ss_pred ChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCCCCCCCCCCC
Q 006696 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS 499 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~~~~~~~~~~ 499 (635)
+|.++|... ..++++++++.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.+...+ +.+. .
T Consensus 34 SL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------~ 98 (229)
T 2yle_A 34 SLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------A 98 (229)
T ss_dssp EHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred cHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc--------c
Confidence 788888643 3569999999999999998877632111 1 1333456899999999998764 2111 1
Q ss_pred CCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCC
Q 006696 500 RSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537 (635)
Q Consensus 500 ~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p 537 (635)
....+.|||... ...+.+.=|||+|+++|..+.-..|
T Consensus 99 ~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 99 GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 223467888764 3456788999999999999875544
No 444
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.14 E-value=0.0068 Score=63.53 Aligned_cols=73 Identities=7% Similarity=0.071 Sum_probs=48.6
Q ss_pred cccccCceEEEEEEecC--------CCeEEEEEeecccCCHHHHHHHHHHHHhhCCCCceeceeEEEEeCCceEEEeeec
Q 006696 345 VLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 345 ~iG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+..|-...+|+....+ +..+++++........-+..+|..+++.+..+.-..++++.+ .-++||||+
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~efI 152 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIEEFI 152 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEECC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEEEEe
Confidence 46667778899998753 577888886443222234567888888875555456666543 237899999
Q ss_pred cCCCh
Q 006696 417 ASGSL 421 (635)
Q Consensus 417 ~~g~L 421 (635)
+|..|
T Consensus 153 ~G~~l 157 (424)
T 3mes_A 153 DGEPL 157 (424)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 98654
No 445
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.87 E-value=0.032 Score=57.52 Aligned_cols=85 Identities=14% Similarity=0.207 Sum_probs=41.0
Q ss_pred CcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccCccCCCCCC-CcC--CCcceeecccccCcccCCchhhc
Q 006696 86 PNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPS-SFS--PQLVVLDLSFNSFTGNIPQSIQN 162 (635)
Q Consensus 86 p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~--~~L~~L~ls~N~l~~~~p~~~~~ 162 (635)
....+.+..+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +. .++. .|. .+|+.+++.+|.++..-..+|.+
T Consensus 232 ~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~ 308 (379)
T 4h09_A 232 GDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMD 308 (379)
T ss_dssp CTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTT
T ss_pred ccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcC
Confidence 3334555555555555443 33222344555555555555433 32 2222 222 45555555555555344445555
Q ss_pred cccCCcEEcCC
Q 006696 163 LTQLTGLSLQS 173 (635)
Q Consensus 163 l~~L~~L~l~~ 173 (635)
|.+|+.+.|.+
T Consensus 309 c~~L~~i~lp~ 319 (379)
T 4h09_A 309 CVKLSSVTLPT 319 (379)
T ss_dssp CTTCCEEECCT
T ss_pred CCCCCEEEcCc
Confidence 55555555543
No 446
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.86 E-value=0.018 Score=59.71 Aligned_cols=143 Identities=16% Similarity=0.215 Sum_probs=81.4
Q ss_pred ccccccCceEEEEEEecC--------CCeEEEEEeecccC------------CH-------HHHHHHHHHHHhhCCCCce
Q 006696 344 EVLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVV------------GK-------RDFEQQMEIVGRVGQHPNV 396 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~------------~~-------~~~~~e~~~l~~l~~h~ni 396 (635)
+.|..|-...+|++...+ ...|++++.-.... +. +....|..+++.+..+--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 346567778899988753 35677777643211 11 1122478888888666667
Q ss_pred eceeEEEEeCCceEEEeeeccCCChhc--c---------------ccCCC-CCCCCCC-CHHHHHHHHHHHH--------
Q 006696 397 VPLRAYYYSKDEKLLVYDYFASGSLST--L---------------LHGNR-GAGRTPL-DWETRVKILLGTA-------- 449 (635)
Q Consensus 397 v~l~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~-~~~~~~l-~~~~~~~i~~~ia-------- 449 (635)
.++++++.. .+|+||+++-+|.. + +|... .....+. -+....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 778877632 28999998754421 1 11110 0011111 1233333333221
Q ss_pred --------------HHH----HHHHhcC-CCCceecCCCCCCEEEcCC------CCeEEeccCCCC
Q 006696 450 --------------RGV----AHIHSMG-GPKFTHGNIKASNVLINQD------LDGCISDFGLTP 490 (635)
Q Consensus 450 --------------~~l----~~LH~~~-~~~ivHrDlk~~NIll~~~------~~~ki~DfGla~ 490 (635)
.-+ ++|...+ ...++|+|+.+.||+++++ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 2233322 2248999999999999887 789999998764
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=92.57 E-value=0.057 Score=36.09 Aligned_cols=31 Identities=29% Similarity=0.254 Sum_probs=17.9
Q ss_pred ceeeeeehhhHHHHHHHHHHHHhhhhcccCC
Q 006696 258 GAIIAIAVGGSAVLLLVALVILCYCLKKKDN 288 (635)
Q Consensus 258 ~~Ii~ivvg~~~~~ll~~~~i~~~~~~~~~~ 288 (635)
..|++.+++++++++++++++++++++|+.+
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 3456666666666655555555555555443
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=92.39 E-value=0.049 Score=36.32 Aligned_cols=32 Identities=28% Similarity=0.389 Sum_probs=19.3
Q ss_pred ceeeeeehhhHHHHHHHHHHHHhhhhcccCCC
Q 006696 258 GAIIAIAVGGSAVLLLVALVILCYCLKKKDNG 289 (635)
Q Consensus 258 ~~Ii~ivvg~~~~~ll~~~~i~~~~~~~~~~~ 289 (635)
..|++.+++++++++++++++++++++|+.++
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 44666667766666666666566666655443
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.97 E-value=0.45 Score=49.34 Aligned_cols=29 Identities=21% Similarity=0.462 Sum_probs=24.2
Q ss_pred ceecCCCCCCEEE------cCCCCeEEeccCCCCC
Q 006696 463 FTHGNIKASNVLI------NQDLDGCISDFGLTPL 491 (635)
Q Consensus 463 ivHrDlk~~NIll------~~~~~~ki~DfGla~~ 491 (635)
++|+|+.+.|||+ +++..++++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999987653
No 450
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=91.69 E-value=0.042 Score=35.57 Aligned_cols=32 Identities=19% Similarity=0.154 Sum_probs=21.4
Q ss_pred ccCcceeeeeehhhHHHHHHHHHHHHhhhhcc
Q 006696 254 KLGLGAIIAIAVGGSAVLLLVALVILCYCLKK 285 (635)
Q Consensus 254 ~~~~~~Ii~ivvg~~~~~ll~~~~i~~~~~~~ 285 (635)
..+.++|.+++++.++.+.+++.+++++++||
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~rrr 38 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLGILVFRSRRA 38 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCCceeeeehHHHHHHHHHHHHHHHHeecC
Confidence 34556788888888777766666666655543
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=87.66 E-value=0.16 Score=33.76 Aligned_cols=29 Identities=17% Similarity=0.370 Sum_probs=14.0
Q ss_pred eeeeeehhhHHHHHHHHHHHHhhhhcccCC
Q 006696 259 AIIAIAVGGSAVLLLVALVILCYCLKKKDN 288 (635)
Q Consensus 259 ~Ii~ivvg~~~~~ll~~~~i~~~~~~~~~~ 288 (635)
.|+++++| +++++++++.++++.+||+.+
T Consensus 13 ~Ia~~vVG-vll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 13 SIISAVVG-ILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHCSC
T ss_pred chHHHHHH-HHHHHHHHHHHHhheehhhhh
Confidence 35555666 444444444444455554433
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=83.91 E-value=2.7 Score=39.01 Aligned_cols=116 Identities=11% Similarity=0.106 Sum_probs=77.1
Q ss_pred CCCceeceeEEEEeCCceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCC
Q 006696 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKAS 471 (635)
Q Consensus 392 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~ 471 (635)
.||+.+.. .+-..++...+.|+.-+ +..++-. -...+...+++++.+|+....+++. =+|--|.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~------ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN------IKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG------GGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH------HHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 68988877 45555665555555433 2323221 1127889999999999887755554 468889999
Q ss_pred CEEEcCCCCeEEeccCCCCCCCCCCCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 006696 472 NVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539 (635)
Q Consensus 472 NIll~~~~~~ki~DfGla~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~ 539 (635)
|++++.++.+++.-.|+-..+. |. ..++..=.-.+=+++..+++++..|.
T Consensus 109 NL~f~~~~~p~i~~RGik~~l~-------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVVD-------------PL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GEEECTTSCEEESCCEETTTBS-------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred eEEEcCCCCEEEEEccCccCCC-------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999998877643331 21 11112223356778888999988875
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=76.09 E-value=4.7 Score=37.48 Aligned_cols=115 Identities=15% Similarity=0.148 Sum_probs=74.1
Q ss_pred CCCceeceeEEEEeCCceEEEeeeccCCChhccccCCCCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCceecCCCC
Q 006696 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA-HIHSMGGPKFTHGNIKA 470 (635)
Q Consensus 392 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivHrDlk~ 470 (635)
.||+. -..+-.+++...+.++.-+++.=...++ .++...+++++.+|+.... +++. -+|--|.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 68887 3333356666666666543433233332 2778899999999887666 4544 57888999
Q ss_pred CCEEEcCCCCeEEeccCCCCCCCCCCCCCCCCcccCcccccCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 006696 471 SNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539 (635)
Q Consensus 471 ~NIll~~~~~~ki~DfGla~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gv~l~elltg~~p~~ 539 (635)
+|++++.++.++|.-.|+-..+ +|.-+ ++.-=.-.+=+++..++.++..|+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~l-------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESL-------------PPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTB-------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCcccC-------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999999988764332 22211 111122355677777888877764
No 454
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=68.54 E-value=1.8 Score=28.39 Aligned_cols=6 Identities=17% Similarity=0.147 Sum_probs=2.2
Q ss_pred ehhhHH
Q 006696 264 AVGGSA 269 (635)
Q Consensus 264 vvg~~~ 269 (635)
++++++
T Consensus 19 vv~Gv~ 24 (41)
T 2k9y_A 19 VAVGVV 24 (41)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 333333
No 455
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=64.86 E-value=1.1 Score=47.43 Aligned_cols=58 Identities=14% Similarity=0.141 Sum_probs=17.0
Q ss_pred ccccccCceEEEEEEecC-CCeEEE------EEeecccCC---HHHHHHHHHHHHhhCCCCceeceeEEEEe
Q 006696 344 EVLGKGSYGTAYKAVLEE-STTVVV------KRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405 (635)
Q Consensus 344 ~~iG~G~fg~Vy~~~~~~-~~~vav------K~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~ 405 (635)
+.|| ||.||+|.+.. ..+||| |..+..... ...+.+|..++..+ +|+|+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~-~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENE-QIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccc-cccccCCCcceEEe
Confidence 4566 99999999864 367888 766543322 23566777777777 89999999887653
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=49.31 E-value=29 Score=27.59 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=36.5
Q ss_pred CCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCCCcEEeeccC
Q 006696 78 GIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 78 ~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (635)
+.+++ .|...+|.+.++|+.+.|-.+ ++..-...|.++++|+.+.+...
T Consensus 5 g~~vt-~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVV-GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCC-SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccC-EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34555 677778999999999988765 44244567889999998888764
No 457
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=45.35 E-value=14 Score=26.64 Aligned_cols=17 Identities=53% Similarity=0.690 Sum_probs=8.7
Q ss_pred eehhhHHHHHHHH-HHHH
Q 006696 263 IAVGGSAVLLLVA-LVIL 279 (635)
Q Consensus 263 ivvg~~~~~ll~~-~~i~ 279 (635)
+++|+++.+++++ +.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 4666665555443 3344
No 458
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=44.20 E-value=2.5 Score=26.47 Aligned_cols=23 Identities=22% Similarity=0.395 Sum_probs=9.1
Q ss_pred eeehhhHHHHHHHHHHHHhhhhcc
Q 006696 262 AIAVGGSAVLLLVALVILCYCLKK 285 (635)
Q Consensus 262 ~ivvg~~~~~ll~~~~i~~~~~~~ 285 (635)
+.++| +++++++.+.+..+.+||
T Consensus 12 agVvg-lll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 12 ATVVG-VLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHH-HHHHHHHTTTTTHHHHHC
T ss_pred HHHHH-HHHHHHHHHHhheEEeec
Confidence 33444 333333333344444443
No 459
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=38.62 E-value=1.1e+02 Score=32.91 Aligned_cols=47 Identities=19% Similarity=0.147 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHH--HHHHHHHhcCCCCceecCCCCCCEEEcCCCCeEEeccCCCC
Q 006696 437 DWETRVKILLGTA--RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 437 ~~~~~~~i~~~ia--~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ki~DfGla~ 490 (635)
.+..+..++..+| .-+.|+=.-| |=.++|||++.+|++.=+|||..-
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILGig-------DRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILGVG-------DRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCC-------CCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheeeecc-------CCCCcceeEcCCCCEeeeehHHhh
Confidence 3555666666654 3456665444 778899999999999999999863
No 460
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=35.78 E-value=8.8 Score=23.75 Aligned_cols=25 Identities=28% Similarity=0.498 Sum_probs=14.3
Q ss_pred cceeeeeehhhHHHHHHHHHHHHhh
Q 006696 257 LGAIIAIAVGGSAVLLLVALVILCY 281 (635)
Q Consensus 257 ~~~Ii~ivvg~~~~~ll~~~~i~~~ 281 (635)
.+.+.+++++.++..+++++.++++
T Consensus 6 ~gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 6 PGVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEeEeHHHHHHHHHHHHHHhhe
Confidence 3456667776666555555555443
No 461
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=30.86 E-value=15 Score=23.96 Aligned_cols=26 Identities=27% Similarity=0.586 Sum_probs=14.9
Q ss_pred CcceeeeeehhhHHHHHHHHHHHHhh
Q 006696 256 GLGAIIAIAVGGSAVLLLVALVILCY 281 (635)
Q Consensus 256 ~~~~Ii~ivvg~~~~~ll~~~~i~~~ 281 (635)
..++++++.+++++++.++++.++..
T Consensus 15 srga~iGL~v~gVai~~vIVvsl~ml 40 (43)
T 2llm_A 15 NKGAIIGLMVGGVVIATVIVITLVML 40 (43)
Confidence 34567777777766655554444433
No 462
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=20.23 E-value=97 Score=22.60 Aligned_cols=19 Identities=32% Similarity=0.670 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHhhhhcccC
Q 006696 269 AVLLLVALVILCYCLKKKD 287 (635)
Q Consensus 269 ~~~ll~~~~i~~~~~~~~~ 287 (635)
+++.+-+++..|||.-|-+
T Consensus 23 avaalg~li~gcwcylrlq 41 (90)
T 1zza_A 23 AIAALGALILGCWCYLRLQ 41 (90)
T ss_dssp HHHHHHHHHHHHHTTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333444445566655543
Done!