Query 006697
Match_columns 635
No_of_seqs 428 out of 2695
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 06:32:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006697.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006697hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qe2_A CPR, P450R, NADPH--cyto 100.0 6E-104 2E-108 901.2 59.1 539 72-632 7-555 (618)
2 2bpo_A CPR, P450R, NADPH-cytoc 100.0 3.2E-99 1E-103 871.0 53.0 532 71-631 37-619 (682)
3 1tll_A Nitric-oxide synthase, 100.0 9.8E-95 3.3E-99 833.7 52.2 524 80-630 8-589 (688)
4 3qfs_A CPR, P450R, NADPH--cyto 100.0 1.9E-73 6.6E-78 625.9 40.4 368 258-632 21-395 (458)
5 2qtl_A MSR;, methionine syntha 100.0 4.9E-69 1.7E-73 602.8 38.5 340 285-632 105-475 (539)
6 4dql_A Bifunctional P-450/NADP 100.0 2.8E-66 9.6E-71 561.1 33.5 322 292-632 4-329 (393)
7 1f20_A Nitric-oxide synthase; 100.0 5.3E-65 1.8E-69 558.4 33.3 333 288-630 24-368 (435)
8 1ddg_A Sulfite reductase (NADP 100.0 7.1E-63 2.4E-67 531.6 31.6 307 286-631 3-311 (374)
9 3hr4_A Nitric oxide synthase, 100.0 7.1E-35 2.4E-39 289.3 18.2 161 74-246 31-191 (219)
10 3jqq_A Ferredoxin NADP reducta 100.0 1.4E-28 4.8E-33 258.9 20.9 243 288-631 9-267 (316)
11 2bmw_A Ferredoxin--NADP reduct 100.0 1.6E-27 5.5E-32 249.0 23.1 216 287-630 14-244 (304)
12 1bvy_F Protein (cytochrome P45 100.0 3.4E-28 1.2E-32 237.7 15.7 147 82-240 20-167 (191)
13 3vo2_A Putative uncharacterize 100.0 2.4E-27 8.2E-32 248.7 21.5 216 286-630 25-250 (310)
14 1fnb_A Ferredoxin-NADP+ reduct 100.0 3.1E-27 1.1E-31 248.1 21.1 215 287-630 30-254 (314)
15 1ykg_A SIR-FP, sulfite reducta 99.9 3.5E-27 1.2E-31 225.6 14.8 149 83-243 9-157 (167)
16 2rc5_A Ferredoxin-NADP reducta 99.9 1.9E-26 6.4E-31 242.1 19.9 221 288-630 15-255 (314)
17 2b5o_A FNR, ferredoxin--NADP r 99.9 5.5E-26 1.9E-30 246.8 20.6 216 288-630 116-342 (402)
18 2hna_A Protein MIOC, flavodoxi 99.9 3.2E-27 1.1E-31 220.8 5.7 144 83-239 1-146 (147)
19 3f6r_A Flavodoxin; FMN binding 99.9 3.2E-25 1.1E-29 207.0 14.3 143 83-238 1-147 (148)
20 3lo8_A Ferredoxin--NADP reduct 99.9 4.7E-24 1.6E-28 223.6 21.1 216 288-630 22-252 (311)
21 1f4p_A Flavodoxin; electron tr 99.9 3.1E-23 1E-27 193.2 14.2 142 84-238 1-146 (147)
22 1tvc_A Methane monooxygenase c 99.9 5.7E-22 1.9E-26 201.0 12.8 153 456-629 44-202 (250)
23 2r6h_A NADH:ubiquinone oxidore 99.9 5.9E-22 2E-26 205.1 12.4 148 469-628 84-243 (290)
24 2wc1_A Flavodoxin; electron tr 99.9 2.4E-22 8.1E-27 194.5 8.5 145 83-241 1-178 (182)
25 1yob_A Flavodoxin 2, flavodoxi 99.9 4.2E-22 1.5E-26 192.3 9.4 143 84-240 1-176 (179)
26 1qfj_A Protein (flavin reducta 99.9 8.4E-22 2.9E-26 197.3 11.9 155 455-630 29-188 (232)
27 2fcr_A Flavodoxin; electron tr 99.9 2.6E-21 9E-26 185.7 14.0 140 85-239 1-171 (173)
28 2bmv_A Flavodoxin; electron tr 99.9 4.2E-22 1.4E-26 189.4 7.1 138 83-239 1-163 (164)
29 2eix_A NADH-cytochrome B5 redu 99.8 1.2E-21 4E-26 197.6 9.7 152 456-627 42-200 (243)
30 1ag9_A Flavodoxin; electron tr 99.8 1.6E-21 5.4E-26 187.6 10.2 143 84-241 1-169 (175)
31 1obo_A Flavodoxin; electron tr 99.8 1.3E-20 4.3E-25 179.7 14.8 142 84-240 2-168 (169)
32 1fdr_A Flavodoxin reductase; f 99.8 2.3E-21 7.8E-26 196.1 9.4 153 455-629 30-191 (248)
33 1umk_A B5R, NADH-cytochrome B5 99.8 2.4E-21 8.3E-26 199.0 9.7 161 456-627 47-231 (275)
34 1krh_A Benzoate 1,2-dioxygenas 99.8 4.7E-21 1.6E-25 203.0 12.1 150 456-628 139-293 (338)
35 1czn_A Flavodoxin; FMN binding 99.8 9.7E-21 3.3E-25 180.5 11.6 142 84-239 1-167 (169)
36 1gvh_A Flavohemoprotein; oxido 99.8 1.9E-20 6.6E-25 202.6 12.4 141 456-618 183-329 (396)
37 4eh1_A Flavohemoprotein; struc 99.8 1.7E-20 5.9E-25 188.9 11.0 153 455-627 33-194 (243)
38 2cnd_A NADH-dependent nitrate 99.8 1.7E-20 5.7E-25 192.2 9.1 162 456-628 43-226 (270)
39 2bgi_A Ferredoxin-NADP(H) redu 99.8 1.3E-20 4.4E-25 193.7 8.0 152 456-629 44-210 (272)
40 1ep3_B Dihydroorotate dehydrog 99.8 1.4E-20 4.9E-25 192.3 8.3 146 456-629 34-186 (262)
41 5nul_A Flavodoxin; electron tr 99.8 3E-19 1E-23 164.4 14.5 118 86-220 1-119 (138)
42 4g1v_A Flavohemoglobin; three 99.8 1.8E-19 6.1E-24 195.3 12.7 151 456-625 184-346 (399)
43 2qdx_A Ferredoxin reductase; o 99.8 1.2E-20 4.1E-25 192.1 3.0 152 456-629 31-196 (257)
44 1cqx_A Flavohemoprotein; globi 99.8 1.4E-19 4.8E-24 196.2 11.0 145 456-618 185-335 (403)
45 4fk8_A Ferredoxin--NADP reduct 99.8 8E-21 2.7E-25 194.9 0.6 153 455-629 46-212 (271)
46 4dik_A Flavoprotein; TM0755, e 99.8 1.6E-19 5.6E-24 196.0 8.7 180 10-234 218-404 (410)
47 3hly_A Flavodoxin-like domain; 99.8 5.6E-19 1.9E-23 167.6 10.4 141 84-240 1-143 (161)
48 3fni_A Putative diflavin flavo 99.8 5.4E-19 1.8E-23 167.5 10.3 144 82-241 3-149 (159)
49 2pia_A Phthalate dioxygenase r 99.8 4.5E-19 1.5E-23 186.7 8.5 148 456-629 39-189 (321)
50 2fz5_A Flavodoxin; alpha/beta 99.7 2.5E-17 8.7E-22 150.6 13.0 131 86-235 2-134 (137)
51 2xod_A NRDI protein, NRDI; fla 99.7 1.1E-17 3.9E-22 150.5 7.7 116 86-236 1-117 (119)
52 1rlj_A NRDI protein; flavoprot 99.6 1.7E-16 5.9E-21 146.8 5.8 123 82-238 7-130 (139)
53 1ycg_A Nitric oxide reductase; 99.6 1E-15 3.5E-20 164.9 6.3 141 83-237 251-394 (398)
54 1e5d_A Rubredoxin\:oxygen oxid 99.5 5.9E-14 2E-18 151.3 14.1 146 82-241 251-398 (402)
55 2ark_A Flavodoxin; FMN, struct 99.5 3.7E-13 1.2E-17 130.4 15.7 149 83-243 4-169 (188)
56 2gpj_A Siderophore-interacting 99.5 1.5E-14 5.2E-19 146.9 5.4 141 456-629 39-184 (252)
57 2a5l_A Trp repressor binding p 99.5 4.8E-13 1.7E-17 130.1 14.9 129 83-215 5-146 (200)
58 3b6i_A Flavoprotein WRBA; flav 99.4 2.3E-12 7.8E-17 125.1 14.4 127 83-214 1-141 (198)
59 2ohh_A Type A flavoprotein FPR 99.4 1.5E-12 5.3E-17 140.2 13.8 145 82-238 255-401 (404)
60 2q9u_A A-type flavoprotein; fl 99.4 1.2E-12 3.9E-17 142.0 11.8 145 83-241 256-405 (414)
61 3n3a_C Protein NRDI; ribonucle 99.4 1.9E-12 6.4E-17 120.2 10.5 98 83-205 20-122 (153)
62 1ydg_A Trp repressor binding p 99.4 7.3E-12 2.5E-16 123.2 15.0 127 82-214 5-152 (211)
63 2zki_A 199AA long hypothetical 99.4 6.9E-12 2.4E-16 122.0 14.6 126 83-214 4-144 (199)
64 3d7n_A Flavodoxin, WRBA-like p 99.3 3.2E-11 1.1E-15 117.3 13.7 122 82-213 5-127 (193)
65 2vzf_A NADH-dependent FMN redu 99.3 6.4E-11 2.2E-15 115.5 14.9 123 83-214 2-138 (197)
66 3klb_A Putative flavoprotein; 99.3 2.7E-11 9.2E-16 114.7 11.6 133 83-235 4-160 (162)
67 4ici_A Putative flavoprotein; 99.2 6.4E-11 2.2E-15 113.2 13.8 135 81-235 11-168 (171)
68 3a1f_A Cytochrome B-245 heavy 99.2 2.8E-12 9.6E-17 122.9 3.4 89 528-617 2-100 (186)
69 1t5b_A Acyl carrier protein ph 99.1 9E-10 3.1E-14 106.8 16.0 158 83-242 1-198 (201)
70 3lyu_A Putative hydrogenase; t 99.1 6E-11 2E-15 109.9 5.8 91 527-629 3-101 (142)
71 3lrx_A Putative hydrogenase; a 99.1 6.2E-11 2.1E-15 111.8 6.0 93 525-629 5-106 (158)
72 3edo_A Flavoprotein, putative 99.1 5.6E-10 1.9E-14 104.2 12.3 126 83-232 3-150 (151)
73 1t0i_A YLR011WP; FMN binding p 99.0 4.4E-09 1.5E-13 101.5 13.3 122 84-215 1-151 (191)
74 1sqs_A Conserved hypothetical 99.0 1.3E-08 4.3E-13 102.4 16.7 153 83-240 1-178 (242)
75 1rtt_A Conserved hypothetical 99.0 4.1E-09 1.4E-13 102.0 12.7 124 83-213 6-143 (193)
76 3gfs_A FMN-dependent NADPH-azo 99.0 9.6E-10 3.3E-14 104.8 7.9 145 84-243 1-167 (174)
77 2q62_A ARSH; alpha/beta, flavo 98.9 2.6E-08 9.1E-13 100.6 16.5 127 82-213 33-170 (247)
78 2fzv_A Putative arsenical resi 98.8 6.5E-08 2.2E-12 99.2 15.7 126 82-212 57-194 (279)
79 2hpv_A FMN-dependent NADH-azor 98.8 1.1E-07 3.6E-12 93.0 16.4 157 83-241 1-203 (208)
80 3fvw_A Putative NAD(P)H-depend 98.7 2.6E-07 8.8E-12 89.6 14.9 128 83-216 2-147 (192)
81 3r6w_A FMN-dependent NADH-azor 98.6 7.3E-07 2.5E-11 87.5 16.5 158 83-242 1-208 (212)
82 1rli_A Trp repressor binding p 98.6 3.2E-07 1.1E-11 87.5 13.4 125 83-215 3-154 (184)
83 4hs4_A Chromate reductase; tri 98.5 9.1E-07 3.1E-11 86.3 14.5 154 83-243 6-184 (199)
84 3k1y_A Oxidoreductase; structu 98.5 7.6E-07 2.6E-11 86.4 13.8 127 82-215 10-155 (191)
85 3lcm_A SMU.1420, putative oxid 98.5 9.6E-07 3.3E-11 85.8 13.9 156 84-243 1-189 (196)
86 3rpe_A MDAB, modulator of drug 98.5 3E-06 1E-10 83.8 16.8 155 82-243 24-216 (218)
87 1d4a_A DT-diaphorase, quinone 98.4 3.4E-06 1.2E-10 86.3 16.1 159 83-244 2-216 (273)
88 3tem_A Ribosyldihydronicotinam 98.4 4.5E-06 1.5E-10 83.2 15.5 161 83-246 1-217 (228)
89 3s2y_A Chromate reductase; ura 97.8 3.8E-08 1.3E-12 96.2 0.0 125 83-214 6-145 (199)
90 2amj_A Modulator of drug activ 98.4 9.2E-06 3.1E-10 79.4 16.5 147 82-233 11-197 (204)
91 3p0r_A Azoreductase; structura 98.3 5.3E-06 1.8E-10 81.5 14.3 158 83-242 4-207 (211)
92 3f2v_A General stress protein 98.3 3.7E-06 1.3E-10 81.6 12.9 157 83-242 1-181 (192)
93 3svl_A Protein YIEF; E. coli C 98.2 1.9E-05 6.5E-10 76.5 14.4 154 83-243 4-183 (193)
94 3u7i_A FMN-dependent NADH-azor 98.2 5.3E-05 1.8E-09 75.1 16.8 161 82-243 3-214 (223)
95 3u7r_A NADPH-dependent FMN red 98.1 7.5E-05 2.6E-09 72.2 17.2 153 83-241 2-176 (190)
96 3ha2_A NADPH-quinone reductase 98.0 0.00011 3.8E-09 70.1 14.1 150 84-241 1-166 (177)
97 4gi5_A Quinone reductase; prot 97.7 0.00078 2.7E-08 68.9 17.1 163 81-246 20-245 (280)
98 3l9w_A Glutathione-regulated p 97.6 0.0007 2.4E-08 73.2 15.8 157 83-243 236-408 (413)
99 1ccw_A Protein (glutamate muta 68.8 8.5 0.00029 34.3 6.2 110 88-216 6-120 (137)
100 3rht_A (gatase1)-like protein; 66.0 6.6 0.00023 39.2 5.4 75 83-167 4-78 (259)
101 4e5v_A Putative THUA-like prot 66.0 34 0.0012 34.3 10.8 74 83-167 4-85 (281)
102 1tvm_A PTS system, galactitol- 62.0 16 0.00053 31.5 6.4 43 82-126 20-64 (113)
103 1t0b_A THUA-like protein; treh 57.4 24 0.00081 34.9 7.6 63 100-167 33-96 (252)
104 1mkz_A Molybdenum cofactor bio 56.7 13 0.00044 34.5 5.2 58 174-231 7-64 (172)
105 1e2b_A Enzyme IIB-cellobiose; 48.6 24 0.00081 30.0 5.2 56 83-149 3-60 (106)
106 3nbm_A PTS system, lactose-spe 46.7 51 0.0017 28.1 7.0 79 82-184 5-85 (108)
107 3gv0_A Transcriptional regulat 46.5 2E+02 0.007 27.5 13.4 137 83-241 8-155 (288)
108 3pzy_A MOG; ssgcid, seattle st 45.9 12 0.00042 34.4 3.2 57 175-232 5-63 (164)
109 3ju3_A Probable 2-oxoacid ferr 44.7 16 0.00056 31.5 3.6 57 83-145 14-71 (118)
110 3l49_A ABC sugar (ribose) tran 42.8 2.2E+02 0.0076 27.1 12.2 140 82-241 4-153 (291)
111 3re1_A Uroporphyrinogen-III sy 41.4 43 0.0015 32.9 6.7 101 82-214 13-118 (269)
112 2pjk_A 178AA long hypothetical 40.0 13 0.00046 34.7 2.4 57 175-231 13-76 (178)
113 3iwt_A 178AA long hypothetical 39.0 19 0.00066 33.2 3.4 47 175-221 13-66 (178)
114 4es6_A Uroporphyrinogen-III sy 38.8 43 0.0015 32.5 6.1 89 100-214 17-110 (254)
115 2l2q_A PTS system, cellobiose- 37.5 29 0.00099 29.4 4.0 34 83-119 4-37 (109)
116 3tb6_A Arabinose metabolism tr 35.3 2.6E+02 0.009 26.5 11.4 141 83-241 15-164 (298)
117 1y5e_A Molybdenum cofactor bio 35.0 27 0.00091 32.1 3.6 57 175-231 11-67 (169)
118 2xdq_A Light-independent proto 34.8 1.2E+02 0.0039 32.4 9.2 112 84-213 197-345 (460)
119 2yxb_A Coenzyme B12-dependent 34.4 1.6E+02 0.0055 26.5 8.9 126 86-238 19-145 (161)
120 1iow_A DD-ligase, DDLB, D-ALA\ 34.3 1.7E+02 0.0058 28.5 9.8 43 83-127 2-47 (306)
121 1tvc_A Methane monooxygenase c 33.1 39 0.0013 32.5 4.7 46 290-340 6-56 (250)
122 3mw8_A Uroporphyrinogen-III sy 32.1 54 0.0019 31.4 5.5 81 102-211 14-96 (240)
123 3g85_A Transcriptional regulat 30.5 2.5E+02 0.0085 26.7 10.2 137 83-241 11-155 (289)
124 1vkr_A Mannitol-specific PTS s 30.2 71 0.0024 27.8 5.4 42 82-125 12-56 (125)
125 2r6h_A NADH:ubiquinone oxidore 30.1 80 0.0027 30.9 6.5 42 294-340 9-51 (290)
126 3m9w_A D-xylose-binding peripl 30.0 3.8E+02 0.013 25.8 12.3 139 83-242 2-152 (313)
127 3czc_A RMPB; alpha/beta sandwi 29.2 26 0.00089 29.8 2.3 33 82-116 17-49 (110)
128 3kbq_A Protein TA0487; structu 28.7 30 0.001 32.2 2.8 55 178-232 4-60 (172)
129 1qfj_A Protein (flavin reducta 27.8 95 0.0033 29.2 6.4 40 295-340 3-42 (232)
130 3o74_A Fructose transport syst 26.7 2.7E+02 0.0091 26.1 9.6 115 84-215 3-126 (272)
131 1di6_A MOGA, molybdenum cofact 26.7 37 0.0013 32.2 3.1 55 177-231 3-61 (195)
132 1ep3_B Dihydroorotate dehydrog 26.2 75 0.0026 30.8 5.4 41 296-341 7-47 (262)
133 2cnd_A NADH-dependent nitrate 25.9 1.1E+02 0.0036 29.7 6.4 43 292-339 10-54 (270)
134 3qk7_A Transcriptional regulat 25.6 4.4E+02 0.015 25.1 13.2 136 83-241 6-154 (294)
135 1umk_A B5R, NADH-cytochrome B5 25.4 1.1E+02 0.0039 29.6 6.6 43 292-339 14-58 (275)
136 4f06_A Extracellular ligand-bi 25.3 4.6E+02 0.016 26.1 11.6 49 157-215 126-174 (371)
137 3rfq_A Pterin-4-alpha-carbinol 25.0 25 0.00086 33.1 1.5 46 175-220 28-74 (185)
138 1krh_A Benzoate 1,2-dioxygenas 24.9 1.1E+02 0.0036 30.9 6.5 42 294-340 108-151 (338)
139 4eg0_A D-alanine--D-alanine li 23.8 1.5E+02 0.005 29.5 7.2 41 83-125 13-56 (317)
140 1jlj_A Gephyrin; globular alph 23.6 38 0.0013 31.8 2.5 57 175-231 12-73 (189)
141 3egc_A Putative ribose operon 23.6 3E+02 0.01 26.2 9.4 137 83-241 8-153 (291)
142 3g1w_A Sugar ABC transporter; 23.5 4.8E+02 0.017 24.8 11.1 138 83-241 4-154 (305)
143 3k4h_A Putative transcriptiona 23.4 3E+02 0.01 26.1 9.3 137 83-241 8-159 (292)
144 2eix_A NADH-cytochrome B5 redu 23.1 1.8E+02 0.0063 27.4 7.5 42 293-339 10-53 (243)
145 2pia_A Phthalate dioxygenase r 22.9 1.5E+02 0.0051 29.7 7.1 42 294-340 8-51 (321)
146 2bgi_A Ferredoxin-NADP(H) redu 22.2 1.2E+02 0.0042 29.4 6.1 43 292-340 14-56 (272)
147 4eyg_A Twin-arginine transloca 21.2 2.5E+02 0.0086 27.7 8.5 97 82-193 138-237 (368)
148 3l6u_A ABC-type sugar transpor 20.9 3.6E+02 0.012 25.5 9.3 112 83-210 8-131 (293)
149 2is8_A Molybdopterin biosynthe 20.8 25 0.00086 32.1 0.6 54 178-231 2-57 (164)
150 2iuy_A Avigt4, glycosyltransfe 20.7 1.1E+02 0.0036 30.4 5.4 40 83-124 3-57 (342)
151 3dbi_A Sugar-binding transcrip 20.6 5.9E+02 0.02 24.7 11.5 139 83-242 61-210 (338)
152 1vd2_A Protein kinase C, IOTA 20.3 1.6E+02 0.0055 24.2 5.3 59 328-393 13-74 (89)
153 3s2u_A UDP-N-acetylglucosamine 20.2 81 0.0028 32.3 4.5 35 544-585 3-39 (365)
No 1
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=100.00 E-value=5.8e-104 Score=901.18 Aligned_cols=539 Identities=41% Similarity=0.743 Sum_probs=471.0
Q ss_pred ccchHHHHhcCCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhc--cCCeEEEEEecC
Q 006697 72 DEDDEADIAAGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLK--KETLAFFMVATY 149 (635)
Q Consensus 72 ~~~~~~~~~~~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~--~~~~vif~~sTy 149 (635)
.|+++++|.+.+++|+|+|||||||||++|++|++++.+. |+.++++++++++.++ +..+. +++++||++|||
T Consensus 7 ~~~~~~~~~~~~~~i~I~YgS~tGnte~~A~~la~~l~~~--g~~~~v~~~~~~~~~~---l~~~~~~~~~~vi~~~sT~ 81 (618)
T 3qe2_A 7 ESSFVEKMKKTGRNIIVFYGSQTGTAEEFANRLSKDAHRY--GMRGMSADPEEYDLAD---LSSLPEIDNALVVFCMATY 81 (618)
T ss_dssp CCCHHHHHHHHTCSEEEEEECSSSHHHHHHHHHHHHGGGG--TCCEEEECGGGSCGGG---GGGGGGSTTCEEEEEEECB
T ss_pred HHHHHHHHHhcCCeEEEEEECChhHHHHHHHHHHHHHHhC--CCceEEechHHcCHHH---hhhcccccCcEEEEEcCcc
Confidence 4689999999889999999999999999999999999887 8899999999998877 22232 478999999999
Q ss_pred CCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHH
Q 006697 150 GDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFT 229 (635)
Q Consensus 150 g~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~ 229 (635)
|+|++|+||..|+++|.+... .|+|++||||||||++|+|||.++|.++++|+++||+++.++|+||++.+++++|+
T Consensus 82 G~G~~pd~~~~F~~~L~~~~~---~l~~~~~avfGlGd~~Y~~f~~~~k~~d~~L~~lGa~~~~~~g~~D~~~~~~~~~~ 158 (618)
T 3qe2_A 82 GEGDPTDNAQDFYDWLQETDV---DLSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGAQRIFELGLGDDDGNLEEDFI 158 (618)
T ss_dssp GGGBCCGGGHHHHHHHHHCCC---CCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEESSCCEEEETTSCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhhccc---cccCCEEEEEeCCCCCcHhHhHHHHHHHHHHHhCCCCEeecccccccCCCcHHHHH
Confidence 999999999999999987432 39999999999999999999999999999999999999999999999889999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCcccCCceEEEEcCCc----ccccCCCC-CCCCCCCCCCCCCCCeeEEEEEeEE
Q 006697 230 AWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIHGPT----VTSSVDNY-SNMPNGNASFDIHHPCRVNVAVRRE 304 (635)
Q Consensus 230 ~W~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~p~~a~V~~~~~ 304 (635)
.|++++|++|++.+..+..... ...+.+++...... ...++... ........+|+.++||.|+|++|++
T Consensus 159 ~W~~~l~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~~n~~ 232 (618)
T 3qe2_A 159 TWREQFWLAVCEHFGVEATGEE------SSIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRK 232 (618)
T ss_dssp HHHHHHHHHHHHHHTCCCC---------CCCCSEEEEECTTCCGGGSBCSCCSSTTTTTSCCSCCSSSSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCccccc------ccccceeEEecccccccccccccccccccccccCCCcccCCcEEEEEEeEEE
Confidence 9999999999998754321110 11235565543211 11111111 1112245678899999999999999
Q ss_pred ecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCCccEEEEeeCCCCCCCCCCCCCCCCCCcc
Q 006697 305 LHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGTPRGSSLTPPFPGPC 384 (635)
Q Consensus 305 L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~pfp~p~ 384 (635)
|+. +++|+|+||+||+++++++|+|||||+|||.|+++.|+++|++||+++|++|+++..++.. ..+.|||.|+
T Consensus 233 Lt~-~~~~~~~hie~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~l~~d~~v~~~~~~~~~-----~~~~~~p~~~ 306 (618)
T 3qe2_A 233 LNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEES-----NKKHPFPCPT 306 (618)
T ss_dssp CSC-CSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCTTCEEEEEESCTTC-----SCCSSSSSSE
T ss_pred cCC-CCCCcEEEEEEEcCCCCcccccCCEEEEEcCCCHHHHHHHHHHhCcCCCceEEEecCCccc-----cCCCCCCCce
Confidence 996 4679999999999999999999999999999999999999999999999999998765422 3467899999
Q ss_pred cHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhcc--CCCChhHHHHHHHhcCCCHHHHHHhCCCCCCChhhHH
Q 006697 385 TLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLS--SPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFF 462 (635)
Q Consensus 385 tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~--s~~~~~~y~~~i~~~~~sl~dvl~~f~s~~~p~~~ll 462 (635)
|++++|++|+||+++|+|++|+.||.||+|+.+|++|+.|+ +++|+++|.+|+.+++++++|||.+||++++|+++|+
T Consensus 307 tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~i~dvL~~fps~~~p~~~l~ 386 (618)
T 3qe2_A 307 SYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLC 386 (618)
T ss_dssp EHHHHHHHTBCCSSCCCHHHHHHHGGGBCSHHHHHHHHHTTCSSSHHHHHHHHHTTTTTCCHHHHHHHSTTBCCCHHHHH
T ss_pred EHHHhhhhEeecCCCCcHHHHHHHHHHcCCHHHHHHHHHhhccChhhHHHHHHHHhhcCCCHHHHHHhCCccCCCHHHHH
Confidence 99999999999999999999999999999999999999998 7789999999999999999999999999999999999
Q ss_pred HHhcCCCCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHhhcCC-CCCCCCccEEEEEeeCCCCcCCCC
Q 006697 463 AAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIP-LEGNGDCSWAPIFIRPSNFKLPAN 541 (635)
Q Consensus 463 ~~~~p~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~l~~-g~~~~~~~~v~i~~~~g~F~lp~~ 541 (635)
+++ |+++||+|||||+|..+++.++|+|+++.++++.++.+.|+||+||+++.+ |+ ....+.|+|++|.|+|++|.+
T Consensus 387 ~~l-p~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~Gd-~~~~~~v~v~~p~g~F~lp~~ 464 (618)
T 3qe2_A 387 ELL-PRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGE-NGGRALVPMFVRKSQFRLPFK 464 (618)
T ss_dssp HHS-CBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC------CCEEEEEEECCSCCCCSS
T ss_pred Hhc-cccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhcccCC-CCcceEEEEEEecCcccCCCC
Confidence 999 999999999999998878999999999999999899999999999999888 61 000128999999999999988
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccEEEEEEecCCCCcc
Q 006697 542 PSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREGSQKE 621 (635)
Q Consensus 542 ~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~l~~a~SR~~~~k~ 621 (635)
+.+|+||||+||||||||||+|+|.++..+|...++++||||||+++.|++|++||++|.+.|.+++++++|||++..|+
T Consensus 465 ~~~piimIg~GtGIAPfrs~l~~r~~~~~~g~~~~~~~L~~G~R~~~~D~ly~~el~~~~~~g~l~~l~~a~Srd~~~k~ 544 (618)
T 3qe2_A 465 ATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKV 544 (618)
T ss_dssp TTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHHTSSSEEEEEETTSSSSCC
T ss_pred CCCCeEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCccccchHHHHHHHHhcCCCcEEEEEEcCCCCCCC
Confidence 88999999999999999999999987655554568999999999996699999999999999999899999999998999
Q ss_pred cchhHHhcccc
Q 006697 622 YVQHKMMDKVS 632 (635)
Q Consensus 622 yVQd~l~~~~~ 632 (635)
||||+|.++++
T Consensus 545 yVqd~l~~~~~ 555 (618)
T 3qe2_A 545 YVQHLLKQDRE 555 (618)
T ss_dssp CHHHHHHHTHH
T ss_pred cHHHHHHHhHH
Confidence 99999998753
No 2
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=100.00 E-value=3.2e-99 Score=870.98 Aligned_cols=532 Identities=32% Similarity=0.560 Sum_probs=459.2
Q ss_pred CccchHHHHhcCCCeEEEEEECCCchHHHHHHHHHHHHH-hhhCCceEEEEeCCCCCcCchHHHhhhccC-CeEEEEEec
Q 006697 71 KDEDDEADIAAGKTKVTVFYGTQTGTAEGFAKALAEEIK-ARYEKAAVKVVDLDDYAMDDEQYEEKLKKE-TLAFFMVAT 148 (635)
Q Consensus 71 ~~~~~~~~~~~~~~~v~I~YgSqtGtte~~A~~l~~~l~-~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~-~~vif~~sT 148 (635)
+++++++++.+.+++++|+|||||||||++|++|++++. +. |+.++++++++++.++ +.++ +.+||++||
T Consensus 37 ~~~~~~~~~~~~~~ki~IlY~S~tGnte~~A~~ia~~l~~~~--g~~v~v~~l~~~~~~~------l~~~~~~vi~~~sT 108 (682)
T 2bpo_A 37 GNRDIAQVVTENNKNYLVLYASQTGTAEGFAKAFSKELVAKF--NLNVMCADVENYDFES------LNDVPVIVSIFIST 108 (682)
T ss_dssp -CCCHHHHHHHTTCSEEEEEECSSSHHHHHHHHHHHHHHHHH--CCCEEEEETTSSCGGG------GGGCCSEEEEEEEC
T ss_pred cchhHHHHHhcCCCeEEEEEECCchHHHHHHHHHHHHhHHhc--CCceEEeehHHCCHHH------HhhcCCeEEEEeCc
Confidence 457999999999999999999999999999999999998 66 7889999999999887 7788 999999999
Q ss_pred CCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCC-CchHH
Q 006697 149 YGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQ-CIEDD 227 (635)
Q Consensus 149 yg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~-~~e~~ 227 (635)
||+|++|+|+..|++||.... ...|++++|||||+||++|+|||.++|.++++|+++||+++.+.+++|++. +.+++
T Consensus 109 ~G~G~~p~~~~~F~~~l~~~~--~~~L~~~~~avfGlGds~Y~~f~~a~k~l~~~L~~lGa~~l~~~~~~D~~~~~~~~~ 186 (682)
T 2bpo_A 109 YGEGDFPDGAVNFEDFICNAE--AGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAGAIRLGKLGEADDGAGTTDED 186 (682)
T ss_dssp BTTTBCCSSCHHHHHHHHTCC--TTSSTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECSCCEEEETTTTCHHHH
T ss_pred cCCCCCCHHHHHHHHHHHhcc--chhccCCEEEEEecCCCCchhHhHHHHHHHHHHHHCCCeEeECcEEEecCCcccHHH
Confidence 999999999999999998753 123899999999999999999999999999999999999999999999874 78999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCcccCCceEEEEcC---CcccccCCCCCCC----------CCCCCCCCCCCC
Q 006697 228 FTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIHG---PTVTSSVDNYSNM----------PNGNASFDIHHP 294 (635)
Q Consensus 228 f~~W~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------~~~~~~~~~~~p 294 (635)
|++|.+++|++|++.+..+..... ..+.+.++..+ +....++++..+. .+...+|+.++|
T Consensus 187 ~~~W~~~l~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 259 (682)
T 2bpo_A 187 YMAWKDSILEVLKDELHLDEQEAK-------FTSQFQYTVLNEITDSMSLGEPSAHYLPSHQLNRNADGIQLGPFDLSQP 259 (682)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCC-------CCCSBCCEECSSCCTTSCSSCSSGGGSTTSCCCCCTTCCBCSCCBTTBC
T ss_pred HHHHHHHHHHHHHhhcCCcccccc-------cCCcceeEecccCCccccccCccccccccccccccccccccCcccCCCc
Confidence 999999999999987753322110 11222332221 1111122211100 113457889999
Q ss_pred eeEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCCccEEEEeeCCCCCCCCCC
Q 006697 295 CRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGTPRGS 374 (635)
Q Consensus 295 ~~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~~~~~~~~ 374 (635)
|.|+|+.+++|++ +++|+|+||+||+++++++|+|||||+|||.|+++.|+++|++||+++|++|+++..++
T Consensus 260 ~~a~v~~~~~L~~-~~~~~~~hie~d~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l~l~~d~~v~~~~~~~------- 331 (682)
T 2bpo_A 260 YIAPIVKSRELFS-SNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLKPLDP------- 331 (682)
T ss_dssp CCEEEEEEEECCC-CSSCCEEEEEEECTTBTCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEEECCBSST-------
T ss_pred eEEEEEEEEEccC-CCCCCEEEEEEEcCCCCceecCCCEEEEEcCCCHHHHHHHHHHhhccCCcEEEEecCCc-------
Confidence 9999999999999 77899999999999999999999999999999999999999999999999999876543
Q ss_pred CCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhccCCCChhHHHHHHHhcCCCHHHHHHhCC--
Q 006697 375 SLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFP-- 452 (635)
Q Consensus 375 ~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~s~~~~~~y~~~i~~~~~sl~dvl~~f~-- 452 (635)
+.+.|||.|||++++|++|+||+++|+|++|+.||.||+|+.+|++|++|+ +|+++|.+|+.++++|++|||.+||
T Consensus 332 ~~~~p~p~~~tl~~~l~~~ldi~~~p~~~~l~~la~~a~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~i~dvL~~fp~~ 409 (682)
T 2bpo_A 332 TVKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLS--KDKDQFAVEITSKYFNIADALKYLSDG 409 (682)
T ss_dssp TCCCSSCSSEEHHHHHHHTBCCSSCCCHHHHHHHSTTCSSHHHHHHHHHHT--TCHHHHHHHTGGGTCCHHHHHHHHHTT
T ss_pred ccCCCCCCCccHHHHHHHhhhccCCCCHHHHHHHHHHCCCHHHHHHHHHhc--cCHHHHHHHHhcCCCCHHHHHHhccCc
Confidence 246689999999999999999999999999999999999999999999996 8999999999999999999999999
Q ss_pred --CCCCChhhHHHHhcCCCCccccccCCCCCCCCCeEEEEEEEEEecCCC---CCcccCccchHHhhcCCCC--------
Q 006697 453 --SATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPT---GRIHKGVCSTWMKNAIPLE-------- 519 (635)
Q Consensus 453 --s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~---g~~~~G~~S~~L~~l~~g~-------- 519 (635)
++++|+++++..+ |+++||+|||||+|..+++.++|+|+++.|+++. ++.+.|+||+||+++++|+
T Consensus 410 ~~s~~~p~~~l~~~l-p~l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l~~g~~~~~~~~~ 488 (682)
T 2bpo_A 410 AKWDTVPMQFLVESV-PQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAET 488 (682)
T ss_dssp CCCTTSCHHHHHHHS-CBCCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHHHHHHTTCCTTTS
T ss_pred ccccCCCHHHHHHhC-cccccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhccccccccccccc
Confidence 8899999999998 9999999999999987789999999999999886 6778999999999987731
Q ss_pred ---CC---------CCccEEEEEeeCCCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHh------cCCCCCcEEEE
Q 006697 520 ---GN---------GDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ------DGAQLGPALLF 581 (635)
Q Consensus 520 ---~~---------~~~~~v~i~~~~g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~------~g~~~~~~~Lf 581 (635)
+. ..+..|+|+++.++|+||.++.+|+||||+||||||||||||++.++.. .|...++++||
T Consensus 489 ~~G~~v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~~~~~~~g~~~~~~~L~ 568 (682)
T 2bpo_A 489 NLPVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILF 568 (682)
T ss_dssp CCCCCCCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHHHHHHHHHTCC----CCCCCCEEEE
T ss_pred ccccceeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHHHHHHhhcccccccccCCcCCEEEE
Confidence 00 0014788888888899998888999999999999999999999987654 33346899999
Q ss_pred EeecCCCcccccHHHHHHHH-HcCCccEEEEEEec-CCCCcccchhHHhccc
Q 006697 582 FGCRNRRMDFIYEDELNNFE-EEGVISELILAFSR-EGSQKEYVQHKMMDKV 631 (635)
Q Consensus 582 fG~R~~~~d~ly~del~~~~-~~g~~~~l~~a~SR-~~~~k~yVQd~l~~~~ 631 (635)
||||++. |++|++||++|+ +.|.+++++++||| ++..++||||+|.+++
T Consensus 569 fG~R~~~-D~ly~dEl~~~~~~~g~~~~l~~afSr~d~~~k~yVqd~l~e~~ 619 (682)
T 2bpo_A 569 YGSRNTD-DFLYQDEWPEYAKKLDGSFEMVVAHSRLPNTKKVYVQDKLKDYE 619 (682)
T ss_dssp EEESSSS-SCTTTTTHHHHHHHHGGGEEEEEEESCCTTSCCCCHHHHHHHTH
T ss_pred EecCChh-hhhhHHHHHHHHHhcCCceEEEEEECCCCCCCCcchHHHHHhhH
Confidence 9999995 999999999995 55888899999999 5668999999998865
No 3
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=100.00 E-value=9.8e-95 Score=833.74 Aligned_cols=524 Identities=34% Similarity=0.599 Sum_probs=444.3
Q ss_pred hcCCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHH
Q 006697 80 AAGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAA 159 (635)
Q Consensus 80 ~~~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~ 159 (635)
...+++++|+|||||||||++|++|++.+. . ++.+++++|++|+.++ +..++++||++||||+|+||+|+.
T Consensus 8 ~~~~~k~~IlY~S~TG~te~~A~~l~~~l~-~--~~~~~v~~m~~~d~~~------l~~~~~vl~vtsT~G~Gdpp~n~~ 78 (688)
T 1tll_A 8 MAKRVKATILYATETGKSQAYAKTLCEIFK-H--AFDAKAMSMEEYDIVH------LEHEALVLVVTSTFGNGDPPENGE 78 (688)
T ss_dssp -CCSCEEEEEEECSSSHHHHHHHHHHHHHT-T--TSEEEEEETTTSCTTS------GGGCSEEEEEECCBTTTBCCGGGH
T ss_pred hcCCCeEEEEEECCchHHHHHHHHHHHHHh-c--CCCcEEeecccCChhH------hccCceEEEEEcccCCCcCCHHHH
Confidence 345779999999999999999999999996 5 6889999999999988 788999999999999999999999
Q ss_pred HHHHHHhcCCC---------------------------------------CCCCCCCceEEEEEecCcchhHHHHHHHHH
Q 006697 160 RFYKWFTEGND---------------------------------------RGPWLQQLKFGVFGLGNRQYEHFNKIGIVL 200 (635)
Q Consensus 160 ~F~~~L~~~~~---------------------------------------~~~~l~~~~~aVFGlGds~Y~~f~~~~k~l 200 (635)
.|+++|.+... ....|+|++||||||||++|+|||+++|.|
T Consensus 79 ~F~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~L~~~~~aVfGlGds~Y~~F~~~~k~l 158 (688)
T 1tll_A 79 KFGCALMEMRHPNSVQEERKSYKVRFNSVSSYSDSRKSSGDGPDLRDNFESTGPLANVRFSVFGLGSRAYPHFCAFGHAV 158 (688)
T ss_dssp HHHHHHHHHTC-----CCCCCHHHHTSCCC----------------------CTTTTCEEEEEEEECTTSSSTTHHHHHH
T ss_pred HHHHHHHhccCCccccccccccccccccccccccccccccccccccccccccccCCCCeEEEEeeccCchHHHHHHHHHH
Confidence 99999976510 013589999999999999999999999999
Q ss_pred HHHHHHCCCEEeecceeecCCCCchHHHHHHHHHHHHHHHHhhcCCCCCCC-C--C---CCC-cccCCceEEEEcCCccc
Q 006697 201 DEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANT-V--S---TPY-TAAIPEYRVMIHGPTVT 273 (635)
Q Consensus 201 d~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~~~~~~~~~~-~--~---~~~-~~~~~~~~~~~~~~~~~ 273 (635)
+++|+++||+++.++++||+..+.+++|++|.+++|++|++.+..+..... . . .+. ....+.+++........
T Consensus 159 d~~L~~lGa~rl~~~~~~D~~~g~e~~f~~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (688)
T 1tll_A 159 DTLLEELGGERILKMREGDELCGQEEAFRTWAKKVFKAACDVFCVGDDVNIEKPNNSLISNDRSWKRNKFRLTYVAEAPD 238 (688)
T ss_dssp HHHHHHTTCEESSCCEEEETTTTHHHHHHHHHHHHHHHHHHHHTCCSSSCCC-------CCSSSCCTTTEEEEECSCCCC
T ss_pred HHHHHHcCCceeecceeeccCCCcHHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcceEEeccccccc
Confidence 999999999999999999998889999999999999999987643221110 0 0 000 00122344443221100
Q ss_pred ccCCCCCCCCCCCCCCCCCCCeeEEEEEeEEecCCCCCCceEEEEEEecCC-CCccCCCCeEEEeccCCHHHHHHHHHHh
Q 006697 274 SSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGT-GITYETGDHVGVYVENCDETVEEAGKLL 352 (635)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~-~l~Y~~GD~l~I~p~N~~~~V~~~l~~l 352 (635)
......+++.++||.++|++|++|+.++++|+|+||+||++++ +++|+|||||+|||.|+++.|+++|++|
T Consensus 239 --------~~~~~~~~~~~~~~~a~v~~~~~Lt~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l 310 (688)
T 1tll_A 239 --------LTQGLSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERL 310 (688)
T ss_dssp --------HHHHHHHHTTSCCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTC
T ss_pred --------ccccccccccCCceEEEEEeeeecCCCCCCceEEEEEEecCCCCCCccCCCCEEEEecCCCHHHHHHHHHHh
Confidence 0000123556789999999999999999999999999999875 7999999999999999999999999999
Q ss_pred CC--CCccEEEEeeCCCCCCCCC----CCCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhccC
Q 006697 353 GQ--SLELLFSLHTDNEDGTPRG----SSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSS 426 (635)
Q Consensus 353 ~l--~~~~~~~~~~~~~~~~~~~----~~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~s 426 (635)
|+ ++|++|+++..++...+.+ ...+.+|| |||++++|++|+||+++|+|++|+.||.||+|+.+|++|+.|++
T Consensus 311 ~~~~~~d~~v~~~~~~~~~~p~~~~~~~~~~~~~p-~~tl~~~l~~~lDi~~~p~~~~l~~la~~a~~~~ek~~L~~l~~ 389 (688)
T 1tll_A 311 EDAPPANHVVKVEMLEERNTALGVISNWKDESRLP-PCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSK 389 (688)
T ss_dssp SSCCCSCSCEEEEEEEECCCSSSCCEEEEECCSSC-SBCHHHHHHHTBCCSSCCCHHHHHHHHTTBCCHHHHHHHHHHTT
T ss_pred CCCCCCCeEEEEeccccccCCCcccccccccCCCC-CccHHHHHHhheeCCCCCCHHHHHHHHHHcCCHHHHHHHHHHhc
Confidence 86 6789998875422111100 01345788 99999999999999999999999999999999999999999964
Q ss_pred CCChhHHHHHHHhcCCCHHHHHHhCCCCCCChhhHHHHhcCCCCccccccCCCCCCCCCeEEEEEEEEEecCCCC--Ccc
Q 006697 427 PQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTG--RIH 504 (635)
Q Consensus 427 ~~~~~~y~~~i~~~~~sl~dvl~~f~s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g--~~~ 504 (635)
+++.|.+|+..++++++|||.+||++++|+++++..+ |++++|+|||||+|..+++.++|+|+++.+++++| +.+
T Consensus 390 --~~~~~~~~~~~~~~~i~evl~~fps~~~p~~~l~~~l-p~l~~R~YSIsSsp~~~~~~i~l~V~vv~~~~~~g~~~~~ 466 (688)
T 1tll_A 390 --GLQEYEEWKWGKNPTMVEVLEEFPSIQMPATLLLTQL-SLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVH 466 (688)
T ss_dssp --CSHHHHHHHHHHCCCHHHHHHHSTTBCCCHHHHHHHS-CBCCCEEEEBCSCTTTSTTEEEEEEECCEEETGGGTSCEE
T ss_pred --CHHHHHHHHhhcCCCHHHHHHhCCCcCCCHHHHHHhC-cccceeEEeecCCcccCCCeEEEEEEEEEEecCCCCCCcC
Confidence 7899999999999999999999999999999999998 99999999999999866789999999998877654 577
Q ss_pred cCccchHHhhcCCCCCCCCccEEEEEeeCC-CCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHh-cCCCCCcEEEEE
Q 006697 505 KGVCSTWMKNAIPLEGNGDCSWAPIFIRPS-NFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ-DGAQLGPALLFF 582 (635)
Q Consensus 505 ~G~~S~~L~~l~~g~~~~~~~~v~i~~~~g-~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~-~g~~~~~~~Lff 582 (635)
.|+||+||+++++| +.|.|++|.+ .|.||.++.+|+||||+||||||||||||++.+..+ .+...++++|||
T Consensus 467 ~G~~S~~L~~l~~G------d~v~v~~~p~g~F~lp~~~~~piIlIagGtGIAP~~s~l~~~~~~~~~~~~~~~~v~L~~ 540 (688)
T 1tll_A 467 HGVCSSWLNRIQAD------DVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVF 540 (688)
T ss_dssp ECHHHHHHTTCCTT------SEEEEEEECCGGGSCCSCTTSCEEEEEEGGGGTTHHHHHHHHHHHHHHSCCCCCCEEEEE
T ss_pred CCchhHHHHhCCCC------CEEEEEeccCCCcccCcCCCCCEEEEEcCcchHHHHHHHHHHHHhhhhccCCCCCEEEEE
Confidence 89999999999999 8999999655 999998888999999999999999999999987432 223568999999
Q ss_pred eecCCCcccccHHHHHHHHHcCCccEEEEEEecCCCC-cccchhHHhcc
Q 006697 583 GCRNRRMDFIYEDELNNFEEEGVISELILAFSREGSQ-KEYVQHKMMDK 630 (635)
Q Consensus 583 G~R~~~~d~ly~del~~~~~~g~~~~l~~a~SR~~~~-k~yVQd~l~~~ 630 (635)
|||+++.|++|++||++|.+.+.+++++++|||++.. ++||||+|.++
T Consensus 541 G~R~~~~D~ly~dEL~~~~~~~~~~~l~~a~Sr~~~~~k~yVq~~l~~~ 589 (688)
T 1tll_A 541 GCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQ 589 (688)
T ss_dssp EESCTTTTCTTHHHHHHHHHTTSEEEEEEEESSCTTSCCCCHHHHHHHS
T ss_pred EeccchhhhhHHHHHHHHHHcCCceEEEEEECCCCCCCccchhhhhHHh
Confidence 9999987899999999999999988999999999764 89999999876
No 4
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=100.00 E-value=1.9e-73 Score=625.93 Aligned_cols=368 Identities=41% Similarity=0.754 Sum_probs=327.1
Q ss_pred ccCCceEEEEcCCc----ccccCCCCC-CCCCCCCCCCCCCCeeEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCC
Q 006697 258 AAIPEYRVMIHGPT----VTSSVDNYS-NMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGD 332 (635)
Q Consensus 258 ~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD 332 (635)
...++|+++.+++. ++.|+++.. ...++..+|+.+|||.|+|++|++|+.+ ++|+|+||||||++++++|+|||
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~ge~~~~~~~~~~~~~~~~~~p~~a~v~~n~~Lt~~-~~r~~~hie~dl~~s~l~Y~~GD 99 (458)
T 3qfs_A 21 MSIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQG-TERHLMHLELDISDSKIRYESGD 99 (458)
T ss_dssp ---CCEEEEECTTCCGGGCBSSCSSSTTTTTSCCSCCCSSSCEEEEEEEEEECCSS-SSSCEEEEEEECTTSCCCCCTTC
T ss_pred cceeceEEEEccCccccccccCChhhcccccccCCCCCCCCCEEEEEEEEEEcCCC-CCCCEEEEEEEeCCCCcccCCCC
Confidence 35678999887644 356676542 3455788999999999999999999984 67999999999999999999999
Q ss_pred eEEEeccCCHHHHHHHHHHhCCCCccEEEEeeCCCCCCCCCCCCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhC
Q 006697 333 HVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHA 412 (635)
Q Consensus 333 ~l~I~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~ 412 (635)
||+|||.|+++.|+++|++||+++|++|+++..++.. +.+.|||.|+|++++|++|+||+++|+|++|+.||.||
T Consensus 100 ~l~V~p~N~~~~V~~~l~~l~~~~d~~v~~~~~~~~~-----~~~~p~~~~~tl~~~l~~~~di~~~p~~~~l~~la~~a 174 (458)
T 3qfs_A 100 HVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEES-----NKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYA 174 (458)
T ss_dssp EEEECCCCCHHHHHHHHHHHTCCTTCEEEEEESSTTC-----SCCCSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGGB
T ss_pred EEEEEeeCCHHHHHHHHHHhCcCCCceEEecCCCccc-----ccCCCCCCCeeHHHHHHhcEeccCCCCHHHHHHHHHHc
Confidence 9999999999999999999999999999998765422 34668999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhccC--CCChhHHHHHHHhcCCCHHHHHHhCCCCCCChhhHHHHhcCCCCccccccCCCCCCCCCeEEEE
Q 006697 413 TEPSEAERLKFLSS--PQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVT 490 (635)
Q Consensus 413 ~d~~~k~~L~~l~s--~~~~~~y~~~i~~~~~sl~dvl~~f~s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~~~~~i~lt 490 (635)
+|+.+|++|+.|++ ++|+++|.+|+.++++|++|||.+||++++|+++|++++ |+++||+|||||+|..+++.++|+
T Consensus 175 ~~~~ek~~L~~l~~~~~~~~~~~~~~~~~~~~~ildvL~~fps~~~p~~~ll~~l-p~l~pR~YSIsSsp~~~~~~i~lt 253 (458)
T 3qfs_A 175 SEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLCELL-PRLQARYYSIASSSKVHPNSVHIC 253 (458)
T ss_dssp CSHHHHHHHHHHHSCSHHHHHHHHHHTTTTTCCHHHHHHHSTTBCCCHHHHHHHS-CBCCCEEEECCSCTTTCTTEEEEE
T ss_pred CCHHHHHHHHHHhccCcccHHHHHHHHhhcCCCHHHHHHhCCccCCCHHHHHhhC-CCCcceeEeeccCcccCCCEEEEE
Confidence 99999999999987 468899999999999999999999999999999999999 999999999999998778999999
Q ss_pred EEEEEecCCCCCcccCccchHHhhcCCCCCCCCccEEEEEeeCCCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHh
Q 006697 491 CALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ 570 (635)
Q Consensus 491 v~~v~~~~~~g~~~~G~~S~~L~~l~~g~~~~~~~~v~i~~~~g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~ 570 (635)
|+++.++++.|+.+.|+||+||+++.+|++......|+|++|.|.|++|.++.+|+||||+||||||||||+|+|.++.+
T Consensus 254 V~vv~~~~~~~r~~~G~~S~~L~~l~~gg~~~~~~~v~v~~p~g~F~lp~~~~~piImIggGTGIAPfrs~lq~r~~l~~ 333 (458)
T 3qfs_A 254 AVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQ 333 (458)
T ss_dssp EECCEEECTTSCEEECHHHHHHHTCCSSCSSCCCCEEEEEEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCCCCchhHHHHhhccCCccCCceEEEEEecCCCcccCCCCCCceEEEcCCcchhhHHHHHHHHHHHHh
Confidence 99999999889999999999999988873111112799999999999998888999999999999999999999876554
Q ss_pred cCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccEEEEEEecCCCCcccchhHHhcccc
Q 006697 571 DGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREGSQKEYVQHKMMDKVS 632 (635)
Q Consensus 571 ~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~l~~a~SR~~~~k~yVQd~l~~~~~ 632 (635)
+|...++++||||||++..|++|++||++|++.+.++++++||||++..|+||||+|.++++
T Consensus 334 ~g~~~~~~~Lf~G~R~~~~D~ly~dEl~~l~~~g~l~~l~~a~SRd~~~k~yVqd~l~~~~~ 395 (458)
T 3qfs_A 334 QGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKVYVQHLLKQDRE 395 (458)
T ss_dssp HTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHHTSSSEEEEEETTSSSSCCCHHHHHHHTHH
T ss_pred cCCCCCCEEEEEEeCCchHhhhHHHHHHHHHHcCCCCEEEEEEECCCCCcccHhHHHHHhHH
Confidence 55456899999999997559999999999999998889999999999899999999988653
No 5
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=100.00 E-value=4.9e-69 Score=602.85 Aligned_cols=340 Identities=33% Similarity=0.580 Sum_probs=299.4
Q ss_pred CCCCCCCCCCeeEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCC--ccEEEE
Q 006697 285 GNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSL--ELLFSL 362 (635)
Q Consensus 285 ~~~~~~~~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N~~~~V~~~l~~l~l~~--~~~~~~ 362 (635)
...||+.++||.|+|+.|++|+.++++|+|+||+||+++++++|+|||||+|||.|+++.|+++|++||+++ +++|.+
T Consensus 105 ~~~~~~~~~~~~a~v~~~~~Lt~~~~~r~v~hield~~~~~l~Y~~GD~l~V~P~N~~~~V~~~l~~lgl~~~~~~~v~~ 184 (539)
T 2qtl_A 105 QVSVTSADPVFQVPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKREHCVLL 184 (539)
T ss_dssp --------CCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECCCCHHHHHHHHHHTTCGGGTTSEEEE
T ss_pred ccCCCCCCCCEEEEEEeeEEcCCCCCCCcEEEEEEecCCCCcCcCCCCEEEEEeCCCHHHHHHHHHHhCCCccCCeEEEE
Confidence 567899999999999999999999999999999999999999999999999999999999999999999986 578888
Q ss_pred eeCCCCCCCCCCCCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhccCCCChhHHHHHHHhcCC
Q 006697 363 HTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQR 442 (635)
Q Consensus 363 ~~~~~~~~~~~~~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~s~~~~~~y~~~i~~~~~ 442 (635)
+..++.... +...+.+||.|||++++|++|+||+++|+|+||+.||.||+|+.+|++|+.|++++|+++|.+|+.++++
T Consensus 185 ~~~~~~~~~-~~~~p~~~p~~~tl~~~L~~~lDi~~~p~~~~l~~la~~a~d~~ek~~L~~l~s~~~~~~~~~~~~~~~~ 263 (539)
T 2qtl_A 185 KIKADTKKK-GATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDACA 263 (539)
T ss_dssp EECTTCCCT-TCCCCTTSCTTCBHHHHHHHTBCTTSCCCHHHHHHHHTTBCSHHHHHHHHHHHSSTTHHHHHHHTTTTTC
T ss_pred eccccccCC-CccCCCCCCCcccHHHHHHHHhhhcCCCCHHHHHHHHHHcCCHHHHHHHHHHhChhhHHHHHHHHhhcCC
Confidence 776543211 2246778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhCCCCCCChhhHHHHhcCCCCccccccCCCCCCCCCeEEEEEEEEEecCCC--CCcccCccchHHhhc-----
Q 006697 443 SLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPT--GRIHKGVCSTWMKNA----- 515 (635)
Q Consensus 443 sl~dvl~~f~s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~--g~~~~G~~S~~L~~l----- 515 (635)
|++|||.+||++++|+++|++++ |+++||+|||||+|..+++.++|+|+++.|++++ ++.+.|+||+||+++
T Consensus 264 ~lldvL~~fps~~~p~~~ll~~l-p~l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~~~ 342 (539)
T 2qtl_A 264 CLLDLLLAFPSCQPPLSLLLEHL-PKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVL 342 (539)
T ss_dssp CHHHHHHHSTTBCCCHHHHHHHS-CBCCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTTC
T ss_pred CHHHHHHhCCCcCCCHHHHHHhC-cCCcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhhhc
Confidence 99999999999999999999999 9999999999999976689999999999886544 466789999999997
Q ss_pred ------CCCCCCCCcc-------EEEEEeeCC-CCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcC--CCCCcEE
Q 006697 516 ------IPLEGNGDCS-------WAPIFIRPS-NFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDG--AQLGPAL 579 (635)
Q Consensus 516 ------~~g~~~~~~~-------~v~i~~~~g-~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g--~~~~~~~ 579 (635)
++| + .|+|++|.| .|+||.++.+|+||||+||||||||||+|+|.++.+++ ...++++
T Consensus 343 ~~~~~~~~G------d~~~~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~~~~~~~~v~ 416 (539)
T 2qtl_A 343 QPNIHASHE------DSGKALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMW 416 (539)
T ss_dssp --------------------CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTTCCCCCEE
T ss_pred cccccCCCC------CccccCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhccccCCCCCEE
Confidence 777 7 999999987 99999888899999999999999999999997755432 2468999
Q ss_pred EEEeecCCCcccccHHHHHHHHHcCCccEEEEEEecCCC------CcccchhHHhcccc
Q 006697 580 LFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREGS------QKEYVQHKMMDKVS 632 (635)
Q Consensus 580 LffG~R~~~~d~ly~del~~~~~~g~~~~l~~a~SR~~~------~k~yVQd~l~~~~~ 632 (635)
||||||+++.|++|++||++|++.|.+++++++|||++. .++||||+|.++++
T Consensus 417 LffG~R~~~~D~ly~dEL~~~~~~g~~~~l~~afSRd~~~~~~~g~k~yVqd~l~e~~~ 475 (539)
T 2qtl_A 417 LFFGCRHKDRDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQ 475 (539)
T ss_dssp EEEEESCTTTCCTTHHHHHHHHHTTSSCEEEEEESSSCC------CCCSHHHHHHHTHH
T ss_pred EEEEECCcchhhHHHHHHHHHHHhCCCcEEEEEEccCCCccccCCCccchhHHHHHhHH
Confidence 999999995599999999999999999999999999987 78999999988653
No 6
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=100.00 E-value=2.8e-66 Score=561.06 Aligned_cols=322 Identities=35% Similarity=0.603 Sum_probs=284.0
Q ss_pred CCCeeEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCCccEEEEeeCCCCCCC
Q 006697 292 HHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGTP 371 (635)
Q Consensus 292 ~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~~~~~ 371 (635)
..+|.|+|++|++|+.++++|+|+|||||+++ +++|+|||||+|||.|+++.|+++|++||+++++.|.++.....
T Consensus 4 ~~~~~a~v~~n~~Lt~~~~~~~~~hie~~l~~-~~~Y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~~--- 79 (393)
T 4dql_A 4 HGAFSTNVVASKELQQPGSARSTRHLEIELPK-EASYQEGDHLGVIPRNYEGIVNRVTARFGLDASQQIRLEAEEEK--- 79 (393)
T ss_dssp -CCEEEEEEEEEECSCTTCSCCEEEEEEECCT-TCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEECCCC-------
T ss_pred CCcEEEEEEeEEEcCCCCCCceEEEEEEECCC-CCccCCCCEEEEEccCCHHHHHHHHHHhCcCCCCeEEEeCCCCc---
Confidence 46789999999999999999999999999984 89999999999999999999999999999999998877543221
Q ss_pred CCCCCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhccCCCChhHHHHHHHhcCCCHHHHHHhC
Q 006697 372 RGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEF 451 (635)
Q Consensus 372 ~~~~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~s~~~~~~y~~~i~~~~~sl~dvl~~f 451 (635)
....|+|.|+|++++|++ +||+++|+|++|+.||.||+|+.+|++|+.|++. +.|.+++..+++|++|||.+|
T Consensus 80 ---~~~~p~~~~~tl~~~l~~-~di~~~~~~~~l~~la~~~~~~~~~~~L~~l~~~---~~~~~~~~~~~~~~ldvL~~f 152 (393)
T 4dql_A 80 ---LAHLPLAKTVSVEELLQY-VELQDPVTRTQLRAMAAKTVCPPHKVELEALLEK---QAYKEQVLAKRLTMLELLEKY 152 (393)
T ss_dssp ----------CCEEHHHHTTS-BCSSSBCCHHHHHHHHHTCCSHHHHHHHHHTTSH---HHHHHHTTTTTCBHHHHHHHC
T ss_pred ---cccCCCCCcEEHHHHHHh-ccccCCCCHHHHHHHHHhCCCHHHHHHHHHHhCc---hHHHHHHhccCCCHHHHHHhC
Confidence 235588899999999999 9999999999999999999999999999999763 389999999999999999999
Q ss_pred CCCCCChhhHHHHhcCCCCccccccCCCCCCCCCeEEEEEEEEEecCCCCC-cccCccchHHhhcCCCCCCCCccEEEE-
Q 006697 452 PSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGR-IHKGVCSTWMKNAIPLEGNGDCSWAPI- 529 (635)
Q Consensus 452 ~s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~-~~~G~~S~~L~~l~~g~~~~~~~~v~i- 529 (635)
|++++|+++|++++ |+++||+|||||+|..+++.++|+|+++.++++.|+ .+.|+||+||+++++| +.|.|
T Consensus 153 ps~~~p~~~~l~~l-p~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~l~~G------d~v~v~ 225 (393)
T 4dql_A 153 PACEMKFSEFIALL-PSIRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAELQEG------DTITCF 225 (393)
T ss_dssp TTCCCCHHHHHHTS-CBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHHCCTT------CEEEEE
T ss_pred CCCCCCHHHHHHhC-CCCcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHhCCCc------CEEEEE
Confidence 99999999999998 999999999999998778999999999998877665 5679999999999999 88884
Q ss_pred -EeeCCCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccE
Q 006697 530 -FIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISE 608 (635)
Q Consensus 530 -~~~~g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~ 608 (635)
.+|.|.|++|.++.+|+||||+||||||||||+|+|.++.++|...++++||||||++..|++|++||+++.+.+.+ +
T Consensus 226 v~~P~g~F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~~g~~~~~v~L~~G~R~~~~d~ly~~el~~~~~~~~l-~ 304 (393)
T 4dql_A 226 ISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQEELENAQSEGII-T 304 (393)
T ss_dssp EECCSSCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTCCTTHHHHHHHHHTTSC-E
T ss_pred EEcCCCCcccCccCCCCeEEEccCceechHHHHHHHHHHHHhcCCCCCCEEEEEEECCcchhhHHHHHHHHHHhCCCe-E
Confidence 56789999998888999999999999999999999877665554568999999999965599999999999987654 7
Q ss_pred EEEEEec-CCCCcccchhHHhcccc
Q 006697 609 LILAFSR-EGSQKEYVQHKMMDKVS 632 (635)
Q Consensus 609 l~~a~SR-~~~~k~yVQd~l~~~~~ 632 (635)
++++||| ++..|+||||+|+++++
T Consensus 305 l~~a~Sr~~~~~k~yVq~~l~~~~~ 329 (393)
T 4dql_A 305 LHTAFSRMPNQPKTYVQHVMEQDGK 329 (393)
T ss_dssp EEEEESSCTTSCCCCHHHHHHHTHH
T ss_pred EEEEEeCCCCCCCcchhhHHHhCHH
Confidence 9999999 55689999999987653
No 7
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=100.00 E-value=5.3e-65 Score=558.42 Aligned_cols=333 Identities=37% Similarity=0.660 Sum_probs=296.9
Q ss_pred CCCCCCCeeEEEEEeEEecCCCCCCceEEEEEEecCC-CCccCCCCeEEEeccCCHHHHHHHHHHhCC--CCccEEEEee
Q 006697 288 SFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGT-GITYETGDHVGVYVENCDETVEEAGKLLGQ--SLELLFSLHT 364 (635)
Q Consensus 288 ~~~~~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~-~l~Y~~GD~l~I~p~N~~~~V~~~l~~l~l--~~~~~~~~~~ 364 (635)
.|+.++||.|+|++|++|+.++++|+|+||+||++++ +++|+|||||+|||.|+++.|+++|++||+ ++|++|+++.
T Consensus 24 ~~~~~~~~~a~v~~~~~l~~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~~~~~~d~~v~~~~ 103 (435)
T 1f20_A 24 NVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEM 103 (435)
T ss_dssp HHHTSCCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTBSSCCCTTSCEEEEE
T ss_pred ccccCCcEEEEEEeEEECCCCCCCceEEEEEEECCCCCCCcCCCCCEEEEEecCCHHHHHHHHHHhCCCCCCCeEEEEec
Confidence 4778999999999999999999999999999999876 799999999999999999999999999986 6789998875
Q ss_pred CCCCCCCCC----CCCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhccCCCChhHHHHHHHhc
Q 006697 365 DNEDGTPRG----SSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVAS 440 (635)
Q Consensus 365 ~~~~~~~~~----~~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~s~~~~~~y~~~i~~~ 440 (635)
..+...+.+ ...+.+|| |||++++|++|+||+++|+|++|+.||.||+|+.+|++|+.|++ +++.|.+|+...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~p-~~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~--~~~~~~~~~~~~ 180 (435)
T 1f20_A 104 LEERNTALGVISNWKDESRLP-PCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSK--GLQEYEEWKWGK 180 (435)
T ss_dssp EEEESSSTTCEEEEEECCSSC-SBCHHHHHHHTBCCSSCCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSHHHHHHHHHH
T ss_pred cccccCCCCccccccccCCCC-CccHHHHHHhceecCCCCCHHHHHHHHHHCCCHHHHHHHHHhhc--CHHHHHHHHhcc
Confidence 422111100 02356888 99999999999999999999999999999999999999999964 789999999999
Q ss_pred CCCHHHHHHhCCCCCCChhhHHHHhcCCCCccccccCCCCCCCCCeEEEEEEEEEecCCCC--CcccCccchHHhhcCCC
Q 006697 441 QRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTG--RIHKGVCSTWMKNAIPL 518 (635)
Q Consensus 441 ~~sl~dvl~~f~s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g--~~~~G~~S~~L~~l~~g 518 (635)
+++++|||.+||++++|+++++..+ |++++|+|||||+|..+++.++|+|+++.+.+++| +.+.|+||+||+++++|
T Consensus 181 ~~~i~~vl~~fps~~~p~~~l~~~l-p~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~l~~G 259 (435)
T 1f20_A 181 NPTMVEVLEEFPSIQMPATLLLTQL-SLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQAD 259 (435)
T ss_dssp CCCHHHHHHHSTTBCBCHHHHHHHS-CBCCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTCCTT
T ss_pred CCCHHHHHHhCCcCCCCHHHHHHhC-CCCCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhhCCCC
Confidence 9999999999999999999999998 99999999999999876789999999998887754 57789999999999999
Q ss_pred CCCCCccEEEEEeeCC-CCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHh-cCCCCCcEEEEEeecCCCcccccHHH
Q 006697 519 EGNGDCSWAPIFIRPS-NFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ-DGAQLGPALLFFGCRNRRMDFIYEDE 596 (635)
Q Consensus 519 ~~~~~~~~v~i~~~~g-~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~-~g~~~~~~~LffG~R~~~~d~ly~de 596 (635)
+.|.|++|.+ .|.+|.++.+|+||||+||||||||||+|++.+... .+...++++||||||+++.|++|++|
T Consensus 260 ------d~v~v~~~~~g~F~lp~~~~~piilIagGtGIAP~~s~l~~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~E 333 (435)
T 1f20_A 260 ------DVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREE 333 (435)
T ss_dssp ------CEEEEEEECCTTSSCCSCTTSCEEEECCGGGGHHHHHHHHHHHHHHHHHCCCCCCEEEEEEESCTTTSCTTHHH
T ss_pred ------CEEEEEEecCCCccCCCCCCCCEEEEECCcCcHHHHHHHHHHHHhhhhccCCCCCEEEEEeecccccchhHHHH
Confidence 8999999654 999998888999999999999999999999987421 22356899999999999878999999
Q ss_pred HHHHHHcCCccEEEEEEecCCCC-cccchhHHhcc
Q 006697 597 LNNFEEEGVISELILAFSREGSQ-KEYVQHKMMDK 630 (635)
Q Consensus 597 l~~~~~~g~~~~l~~a~SR~~~~-k~yVQd~l~~~ 630 (635)
|+++.+.+.+++++++|||++.. ++||||+|.++
T Consensus 334 l~~~~~~~~~~~l~~a~Sr~~~~~k~yVq~~l~~~ 368 (435)
T 1f20_A 334 TLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQ 368 (435)
T ss_dssp HHHHHHTTSEEEEEEEESSCTTSCCCCHHHHHHHH
T ss_pred HHHHHHcCCccEEEEEECCCCCCCCcchhhHHHhh
Confidence 99999999888999999999764 89999999876
No 8
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=100.00 E-value=7.1e-63 Score=531.61 Aligned_cols=307 Identities=29% Similarity=0.474 Sum_probs=282.1
Q ss_pred CCCCCCCCCeeEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCCccEEEEeeC
Q 006697 286 NASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTD 365 (635)
Q Consensus 286 ~~~~~~~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~~~~~~~ 365 (635)
.++|+.++||.|+|++|++|+.++++|+|+||+||+++++++|+|||||+|||+|+++.|+++|++||+++|+.|+++
T Consensus 3 ~~~~~~~~~~~a~v~~~~~lt~~~~~~~~~hi~~~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~v~~~-- 80 (374)
T 1ddg_A 3 TSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVE-- 80 (374)
T ss_dssp CCCCBTTBCEEEEEEEEEECSCTTCSSEEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCSCSEEEET--
T ss_pred CCCCCCCCCEEEEEEEEEEeCCCCCCceEEEEEEEcCCCCcccCCCCEEEEEcCCCHHHHHHHHHHhCCCCCceEEEC--
Confidence 356889999999999999999999999999999999998999999999999999999999999999999999998873
Q ss_pred CCCCCCCCCCCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhccCCCChhHHHHHHHhcCCCHH
Q 006697 366 NEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLL 445 (635)
Q Consensus 366 ~~~~~~~~~~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~s~~~~~~y~~~i~~~~~sl~ 445 (635)
+.|+|++++|++|+||+ +|+|++|+.||.||+|++ |++|+ ++++.|.+|+. +++++
T Consensus 81 ---------------~~~~tl~~~l~~~~di~-~p~~~~l~~la~~~~~~~----L~~l~--~~~~~~~~~~~--~~~~~ 136 (374)
T 1ddg_A 81 ---------------GKTLPLNEALQWHFELT-VNTANIVENYATLTRSET----LLPLV--GDKAKLQHYAA--TTPIV 136 (374)
T ss_dssp ---------------TEEEEHHHHHHHHBCCS-CCCHHHHHHHHHHHTCTT----TGGGT--TCTHHHHHHHH--HSCHH
T ss_pred ---------------CCCccHHHHHHhcccCC-CCCHHHHHHHHHHCCCHH----HHHHh--cChHHHHHHHc--CCCHH
Confidence 14899999999999999 899999999999999974 88886 57889999987 48999
Q ss_pred HHHHhCCCCCCChhhHHHHhcCCCCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHhh-cCCCCCCCCc
Q 006697 446 EVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKN-AIPLEGNGDC 524 (635)
Q Consensus 446 dvl~~f~s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~-l~~g~~~~~~ 524 (635)
|||.+||+ ++++|||+.+. +++++|+|||||+|..+++.++|+|+++.++++ |+.+.|+||+||++ +++|
T Consensus 137 ~vl~~~p~-~~~~Gq~v~l~-~~~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~-~~~~~G~~S~~L~~~l~~G------ 207 (374)
T 1ddg_A 137 DMVRFSPA-QLDAEALINLL-RPLTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEE------ 207 (374)
T ss_dssp HHHHHSCC-CCCHHHHHHHS-CBCCCEEEEBCCCTTTSCSEEEEEEEECEEEET-TEEEECHHHHHHHHSCCSS------
T ss_pred HHHHHCCC-CCCHHHHHhhc-cCCCCccceecCCCCCCCCEEEEEEEEEEeecC-CCCCCCCchHHHHhcCCCC------
Confidence 99999999 99999999999 889999999999997667999999999988775 66778999999999 9999
Q ss_pred cEEEEEeeCC-CCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHc
Q 006697 525 SWAPIFIRPS-NFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEE 603 (635)
Q Consensus 525 ~~v~i~~~~g-~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~ 603 (635)
+.|.|.+|.+ .|.+|.++.+|+||||+||||||||||++++.+. + ..++++||||||+++.|++|++||+++++.
T Consensus 208 d~v~v~~~~~g~F~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~---~-~~~~~~L~~G~R~~~~d~ly~~El~~~~~~ 283 (374)
T 1ddg_A 208 GEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAD---E-APGKNWLFFGNPHFTEDFLYQVEWQRYVKE 283 (374)
T ss_dssp CEEEEEEECCTTSCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHH---T-CCSCEEEEEEESCHHHHCTTHHHHHHHHHT
T ss_pred CEEEEEEeeCCCccCCCCCCCCEEEEECCccHHHHHHHHHHHHhc---C-CCCCEEEEEEeCCchhhhhHHHHHHHHHHh
Confidence 8999999665 9999988889999999999999999999999863 2 457999999999984499999999999999
Q ss_pred CCccEEEEEEecCCCCcccchhHHhccc
Q 006697 604 GVISELILAFSREGSQKEYVQHKMMDKV 631 (635)
Q Consensus 604 g~~~~l~~a~SR~~~~k~yVQd~l~~~~ 631 (635)
+.+++++++|||++..++||||+|.+++
T Consensus 284 ~~~~~l~~a~Srd~~~k~yVq~~l~~~~ 311 (374)
T 1ddg_A 284 GVLTRIDLAWSRDQKEKVYVQDKLREQG 311 (374)
T ss_dssp TSCCEEEEEETTSSSSCCCHHHHHHHTH
T ss_pred CCCcEEEEEEecCCCCCccHHHHHHHhH
Confidence 9989999999999888999999998764
No 9
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=100.00 E-value=7.1e-35 Score=289.31 Aligned_cols=161 Identities=25% Similarity=0.441 Sum_probs=147.8
Q ss_pred chHHHHhcCCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCC
Q 006697 74 DDEADIAAGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGE 153 (635)
Q Consensus 74 ~~~~~~~~~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~ 153 (635)
....+..+.+++|+|+|||||||||++|++|++.+. + |+.++++++++++.++ +..++.+||++||||+|+
T Consensus 31 ~l~~~~~~~~~kv~IlYgS~tGnte~~A~~La~~l~-~--g~~v~v~~l~~~~~~~------l~~~~~vI~~tsTyG~Ge 101 (219)
T 3hr4_A 31 MLMRKTMASRVRVTILFATETGKSEALAWDLGALFS-C--AFNPKVVCMDKYRLSC------LEEERLLLVVTSTFGNGD 101 (219)
T ss_dssp HHHHHHHHTSCEEEEEEECSSSHHHHHHHHHHHHHT-T--TSEEEEEEGGGCCGGG------GGTCSEEEEEEECBTTTB
T ss_pred HHHHHHHhcCCcEEEEEECCchHHHHHHHHHHHHHH-c--CCCeEEEEcccCCHhH------hccCCeEEEEEeccCCCc
Confidence 455666678899999999999999999999999984 5 7889999999998877 889999999999999999
Q ss_pred CChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHH
Q 006697 154 PTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRE 233 (635)
Q Consensus 154 ~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~ 233 (635)
+|+|+..|+++|.+... .+++++|||||+||++|++||.+++.++++|+++||+++.|+++||++.+.+++|+.|.+
T Consensus 102 ~Pdna~~F~~~L~~~~~---~l~~~~~aVfGlGdssY~~F~~a~k~ld~~L~~lGa~~l~~~g~~D~~~~~e~~~~~W~~ 178 (219)
T 3hr4_A 102 CPGNGEKLKKSLFMLKE---LNNKFRYAVFGLGSSMYPRFCAFAHDIDQKLSHLGASQLTPMGEGDELSGQEDAFRSWAV 178 (219)
T ss_dssp CCGGGHHHHHHHHHCCC---CSSCCEEEEEEEECTTSSSTTHHHHHHHHHHHHHTCEESSCCEEEETTSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcch---hhcCCEEEEEeCCCcchHHHhHHHHHHHHHHHHCCCCEeeCCEEEecCCCcHHHHHHHHH
Confidence 99999999999987532 388999999999999999999999999999999999999999999998889999999999
Q ss_pred HHHHHHHHhhcCC
Q 006697 234 LVWPELDQLLRDE 246 (635)
Q Consensus 234 ~l~~~L~~~~~~~ 246 (635)
++|++|++.+..+
T Consensus 179 ~l~~~l~~~~~~~ 191 (219)
T 3hr4_A 179 QTFKAACETFDVR 191 (219)
T ss_dssp HHHHHHHHHTTCT
T ss_pred HHHHHHHHHcCCC
Confidence 9999999987644
No 10
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=99.96 E-value=1.4e-28 Score=258.92 Aligned_cols=243 Identities=20% Similarity=0.307 Sum_probs=176.1
Q ss_pred CCCCCCCeeEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCCccEEEEeeCCC
Q 006697 288 SFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNE 367 (635)
Q Consensus 288 ~~~~~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~ 367 (635)
.|...+|+.++|+.+.+|+.++....++||+|+.++ .+.|.+|+.++|.|+..+.. ... +.. ...
T Consensus 9 ~~~~~~p~~~~v~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~GQ~~~i~~~~~~~~-----~~~----~~~-----~~~ 73 (316)
T 3jqq_A 9 LYTVKNPLKCKIVDKINLVRPNSPNEVYHLEINHNG-LFKYLEGHTCGIIPYYNELD-----NNP----NNQ-----INK 73 (316)
T ss_dssp SSCSSSCEEEEEEEEEECSCTTCSCCEEEEEEECTT-CCCCCTTCEEEECTTCC--------------------------
T ss_pred eecCCCCEEEEEEeeEEccCCCCCCceEEEEEeCCC-CcceecCcEeEEECCCcccc-----ccc----ccc-----ccc
Confidence 477899999999999999988887899999999864 69999999999999875421 000 000 000
Q ss_pred CCCCCCCCCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhccCCCChhHHHHHHHhcCCCHHHH
Q 006697 368 DGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEV 447 (635)
Q Consensus 368 ~~~~~~~~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~s~~~~~~y~~~i~~~~~sl~dv 447 (635)
+|.- .. ++.+++ .+ ++.
T Consensus 74 ~~~~------------~~----~~~~~~---------------------------h~------------------~~~-- 90 (316)
T 3jqq_A 74 DHNI------------IN----TTNHTN---------------------------HN------------------NIA-- 90 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccc------------cc----cccccc---------------------------cc------------------ccc--
Confidence 0000 00 000000 00 000
Q ss_pred HHhCCCCCCChhhHHHHhcCCCCccccccCCCCCCCCCeEEEEEEEEEecCC---CCCcccCccchHHhhcCCCCCCCCc
Q 006697 448 MAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTP---TGRIHKGVCSTWMKNAIPLEGNGDC 524 (635)
Q Consensus 448 l~~f~s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~---~g~~~~G~~S~~L~~l~~g~~~~~~ 524 (635)
. ...- +...+|+|||+|+|.. +.++|+|+++.|..+ .++...|.||+||+++++|
T Consensus 91 -------~------~~~~-g~~~~R~ySIaS~p~~--~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~l~~G------ 148 (316)
T 3jqq_A 91 -------L------SHIK-KQRCARLYSISSSNNM--ENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNLKIN------ 148 (316)
T ss_dssp --------------------CCCCEEEEBCSCTTS--SSEEEEEECCBC---------CCBCHHHHHHHTCCTT------
T ss_pred -------c------ccCC-CcccceeeecccCCCC--CeEEEEEEEEEecccccccCcCCCCchhHHHhhCCCC------
Confidence 0 0011 5578999999999864 689999998866542 1345689999999999999
Q ss_pred cEEEEEeeCCCCcCCCC---CCCcEEEEecCCCchhHHHHHHHHHHHHhc------CCCCCcEEEEEeecCCCcccccHH
Q 006697 525 SWAPIFIRPSNFKLPAN---PSVPIIMVGPGTGLAPFRGFLQERMALKQD------GAQLGPALLFFGCRNRRMDFIYED 595 (635)
Q Consensus 525 ~~v~i~~~~g~F~lp~~---~~~piImIg~GTGIAPfrs~lq~r~~~~~~------g~~~~~~~LffG~R~~~~d~ly~d 595 (635)
+.|.|.+|.|.|.++.+ ..+|+||||+|||||||+|||+++...... +...++++||||||+++ |++|.+
T Consensus 149 d~v~v~gP~G~f~l~~~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~-d~~~~~ 227 (316)
T 3jqq_A 149 DDIYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNED-SILYLN 227 (316)
T ss_dssp CEEEEEEEECCCCCCTTHHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGG-GCTTHH
T ss_pred CEEEEEecCCceEcCCcccCCCCcEEEEeCCceechHHHHHHHHHHhccccccccccCCCCcEEEEEEecCHH-HhhcHH
Confidence 89999999999999876 378999999999999999999998752110 01247999999999998 999999
Q ss_pred HHHHHHHcCC-ccEEEEEEecCCC---CcccchhHHhccc
Q 006697 596 ELNNFEEEGV-ISELILAFSREGS---QKEYVQHKMMDKV 631 (635)
Q Consensus 596 el~~~~~~g~-~~~l~~a~SR~~~---~k~yVQd~l~~~~ 631 (635)
||+++++... ++++++++||++. .++|||+.|.+..
T Consensus 228 eL~~l~~~~~~~~~~~~~~s~~~~~~g~~g~V~~~l~~~~ 267 (316)
T 3jqq_A 228 ELEYFQKMYPNNINIHYVFSYKQNSDATSFYVQDEIYKRK 267 (316)
T ss_dssp HHHHHHHHCTTTEEEEEEEGGGCC---CBCCHHHHHHHTH
T ss_pred HHHHHHHhCCCcEEEEEEECCCcccCCCccchhHHHHHhH
Confidence 9999998865 7789999999854 6799999998753
No 11
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=99.95 E-value=1.6e-27 Score=249.01 Aligned_cols=216 Identities=25% Similarity=0.388 Sum_probs=176.7
Q ss_pred CCCCCCCCeeEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCCccEEEEeeCC
Q 006697 287 ASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDN 366 (635)
Q Consensus 287 ~~~~~~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~ 366 (635)
..|+..+|+.++|+.+++|+..++.++++|++|++++..+.|+||+++.|+++|..
T Consensus 14 ~~~~~~~~~~~~V~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~------------------------ 69 (304)
T 2bmw_A 14 NLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVD------------------------ 69 (304)
T ss_dssp CSBBTTBCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBC------------------------
T ss_pred cccCCCCCEEEEEEEEEEecCCCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCc------------------------
Confidence 45677889999999999999988889999999999876789999999999887631
Q ss_pred CCCCCCCCCCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhccCCCChhHHHHHHHhcCCCHHH
Q 006697 367 EDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLE 446 (635)
Q Consensus 367 ~~~~~~~~~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~s~~~~~~y~~~i~~~~~sl~d 446 (635)
. .|
T Consensus 70 ~------------------------------------------------------------~g----------------- 72 (304)
T 2bmw_A 70 K------------------------------------------------------------NG----------------- 72 (304)
T ss_dssp T------------------------------------------------------------TS-----------------
T ss_pred c------------------------------------------------------------cC-----------------
Confidence 0 00
Q ss_pred HHHhCCCCCCChhhHHHHhcCCCCccccccCCCCCC---CCCeEEEEEEEEEecCCC-CCcccCccchHHhhcCCCCCCC
Q 006697 447 VMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRF---APDRVHVTCALVYGPTPT-GRIHKGVCSTWMKNAIPLEGNG 522 (635)
Q Consensus 447 vl~~f~s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~---~~~~i~ltv~~v~~~~~~-g~~~~G~~S~~L~~l~~g~~~~ 522 (635)
.+.++|+|||+|+|.. .++.++|+|+.+.|.+|. |+...|.||+||+++++|
T Consensus 73 --------------------~~~~~R~ySias~~~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~G---- 128 (304)
T 2bmw_A 73 --------------------KPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPG---- 128 (304)
T ss_dssp --------------------CBCCCEEEEBCSCTTTTTTSSSEEEEEEECCEECSSSSSSCEECHHHHHHHTCCTT----
T ss_pred --------------------CCCCCcceecCCCCcccCCCCCEEEEEEEEEEeeccccCcCCCcchhhHHhcCCCC----
Confidence 1136899999999853 357899999998777654 445679999999999999
Q ss_pred CccEEEEEeeCCCC-cCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhc--C---CCCCcEEEEEeecCCCcccccHHH
Q 006697 523 DCSWAPIFIRPSNF-KLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQD--G---AQLGPALLFFGCRNRRMDFIYEDE 596 (635)
Q Consensus 523 ~~~~v~i~~~~g~F-~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~--g---~~~~~~~LffG~R~~~~d~ly~de 596 (635)
+.|.|.+|.|.| .+|.+..+|+||||+|||||||++||++++....+ + ...++++||||||+.+ |++|.+|
T Consensus 129 --d~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~~~~~v~l~~g~r~~~-d~~~~~e 205 (304)
T 2bmw_A 129 --SEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEE 205 (304)
T ss_dssp --CEEEEEEEECSSSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHHCHHHHHHCTTCCCCSCEEEEEEESSGG-GCTTHHH
T ss_pred --CEEEEEeccCCceeCCCCCCCCEEEEecCccHHHHHHHHHHHHHhhhhhcccccccCCCEEEEEEeCChH-hcchHHH
Confidence 899999999965 56765678999999999999999999998653211 1 0236899999999987 9999999
Q ss_pred HHHHHHcCC-ccEEEEEEecCCC----CcccchhHHhcc
Q 006697 597 LNNFEEEGV-ISELILAFSREGS----QKEYVQHKMMDK 630 (635)
Q Consensus 597 l~~~~~~g~-~~~l~~a~SR~~~----~k~yVQd~l~~~ 630 (635)
|+++.+.+. ++++++++||++. .++|||++|.++
T Consensus 206 l~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~v~~~l~~~ 244 (304)
T 2bmw_A 206 LEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEH 244 (304)
T ss_dssp HHHHHHHCTTTEEEEEEETTTCBCTTSSBCCHHHHHHHT
T ss_pred HHHHHHhCCCcEEEEEEEcCCCCCCCCCcceehHHHHHh
Confidence 999998764 7889999999853 478999999764
No 12
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=99.95 E-value=3.4e-28 Score=237.72 Aligned_cols=147 Identities=30% Similarity=0.630 Sum_probs=132.2
Q ss_pred CCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHH
Q 006697 82 GKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARF 161 (635)
Q Consensus 82 ~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F 161 (635)
.+++++|+|+|+|||||++|+.|++.+.+. |+.+++++++++. ++ +.+++.+||++||| +|++|+++..|
T Consensus 20 ~~~kv~IvY~S~tGnTe~~A~~ia~~l~~~--g~~v~v~~l~~~~-~~------l~~~d~vi~g~~Ty-~G~~p~~~~~f 89 (191)
T 1bvy_F 20 HNTPLLVLYGSNMGTAEGTARDLADIAMSK--GFAPQVATLDSHA-GN------LPREGAVLIVTASY-NGHPPDNAKQF 89 (191)
T ss_dssp -CCCEEEEEECSSSHHHHHHHHHHHHHHTT--TCCCEEEEGGGST-TC------CCSSSEEEEEECCB-TTBCCTTTHHH
T ss_pred CCCeEEEEEECCChHHHHHHHHHHHHHHhC--CCceEEeeHHHhh-hh------hhhCCeEEEEEeec-CCCcCHHHHHH
Confidence 478899999999999999999999999887 8889999998852 24 78899999999999 99999999999
Q ss_pred HHHHhcCCCCCCCCCCceEEEEEecCcch-hHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHHHHHHHHH
Q 006697 162 YKWFTEGNDRGPWLQQLKFGVFGLGNRQY-EHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELD 240 (635)
Q Consensus 162 ~~~L~~~~~~~~~l~~~~~aVFGlGds~Y-~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~~~L~ 240 (635)
+++|..... ..|++++|+|||+||++| +|||.+++.++++|+++||+++.+.+++|+..+.+++|++|.+.+|++|.
T Consensus 90 l~~L~~~~~--~~l~~~~~avfG~Gds~y~~~f~~a~~~l~~~L~~~Ga~~v~~~~~~d~~~d~e~~~~~w~~~l~~~l~ 167 (191)
T 1bvy_F 90 VDWLDQASA--DEVKGVRYSVFGCGDKNWATTYQKVPAFIDETLAAKGAENIADRGEADASDDFEGTYEEWREHMWSDVA 167 (191)
T ss_dssp HHHHHTCCS--SCCTTCCEEEEEEECTTSGGGTTHHHHHHHHHHHTTTCCCCEEEEEEETTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccc--hhhCCCEEEEEEccCCchhhhHhHHHHHHHHHHHHCCCeEeeccEEEecCCChHHHHHHHHHHHHHHhc
Confidence 999976431 238899999999999999 69999999999999999999999999999855677779999999999996
No 13
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=99.95 E-value=2.4e-27 Score=248.73 Aligned_cols=216 Identities=26% Similarity=0.419 Sum_probs=177.8
Q ss_pred CCCCCCCCCeeEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCCccEEEEeeC
Q 006697 286 NASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTD 365 (635)
Q Consensus 286 ~~~~~~~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~~~~~~~ 365 (635)
...|+...|+.++|+.+++++..+....++||+|+.+ ..+.|+||.||.|.++...
T Consensus 25 ~~~~~p~~~~~~~V~~~~~l~~~~~~~~v~~l~l~~~-~~~~~~pGQ~v~l~~~~~~----------------------- 80 (310)
T 3vo2_A 25 TNKYKPKEPYVGRCLSNTRITGDDAPGETWHMVFSTE-GEIPYREGQSIGIIADGED----------------------- 80 (310)
T ss_dssp CCSBBTTBCEEEEEEEEEECSCSSSSSCEEEEEEECT-TCCCCCTTCEEEEECSSBC-----------------------
T ss_pred eeeecCCCCEEEEEEEEEEccCCCCCccEEEEEEeCC-CCCcccCCCEEEEECCCcC-----------------------
Confidence 3457788999999999999998766678999999965 4789999999999764210
Q ss_pred CCCCCCCCCCCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhccCCCChhHHHHHHHhcCCCHH
Q 006697 366 NEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLL 445 (635)
Q Consensus 366 ~~~~~~~~~~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~s~~~~~~y~~~i~~~~~sl~ 445 (635)
..|
T Consensus 81 -------------------------------------------------------------~~g---------------- 83 (310)
T 3vo2_A 81 -------------------------------------------------------------KNG---------------- 83 (310)
T ss_dssp -------------------------------------------------------------TTS----------------
T ss_pred -------------------------------------------------------------CCC----------------
Confidence 000
Q ss_pred HHHHhCCCCCCChhhHHHHhcCCCCccccccCCCCCC---CCCeEEEEEEEEEecCCCCCcccCccchHHhhcCCCCCCC
Q 006697 446 EVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRF---APDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522 (635)
Q Consensus 446 dvl~~f~s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~---~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~l~~g~~~~ 522 (635)
.++++|+|||+|+|.. +++.++|+|+++.+.++.|+.+.|.||+||+++++|
T Consensus 84 ---------------------~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~G~~S~~L~~l~~G---- 138 (310)
T 3vo2_A 84 ---------------------KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPG---- 138 (310)
T ss_dssp ---------------------CBCCCEEEECCSCTTTTTTSSSEEEEEEECCEEECTTSCEEECHHHHHHHTCCTT----
T ss_pred ---------------------CcCcceeeecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCcchhhHHhcCCCC----
Confidence 1236899999999863 368999999999888877888889999999999999
Q ss_pred CccEEEEEeeCCCC-cCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcC-CCCCcEEEEEeecCCCcccccHHHHHHH
Q 006697 523 DCSWAPIFIRPSNF-KLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDG-AQLGPALLFFGCRNRRMDFIYEDELNNF 600 (635)
Q Consensus 523 ~~~~v~i~~~~g~F-~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g-~~~~~~~LffG~R~~~~d~ly~del~~~ 600 (635)
+.|.|.+|.|.| .+|.+..+|+||||+|||||||++||+++......+ ...++++||||||+.+ |++|.+||+++
T Consensus 139 --d~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~~-d~~~~~el~~l 215 (310)
T 3vo2_A 139 --ADVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTSD-SLLYKEELEKM 215 (310)
T ss_dssp --CEEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSSCCTTCCCCSEEEEEEEESSGG-GCCSHHHHHHH
T ss_pred --CEEEEEeccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHhhcccccCCCcEEEEEEecChh-hcccHHHHHHH
Confidence 899999999965 456566789999999999999999999987521110 1137899999999998 99999999999
Q ss_pred HHcCC-ccEEEEEEecCCC----CcccchhHHhcc
Q 006697 601 EEEGV-ISELILAFSREGS----QKEYVQHKMMDK 630 (635)
Q Consensus 601 ~~~g~-~~~l~~a~SR~~~----~k~yVQd~l~~~ 630 (635)
++.+. ++++++++||++. .++|||++|.+.
T Consensus 216 ~~~~~~~~~v~~~~sr~~~~~~g~~~~v~~~l~~~ 250 (310)
T 3vo2_A 216 KEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEY 250 (310)
T ss_dssp HHHCTTTEEEEEEETTTCBCTTCCBCCHHHHHHTT
T ss_pred HHhCCCCEEEEEEECCCCCCCCCcceehHHHHHHH
Confidence 98875 7899999999864 578999999875
No 14
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=99.95 E-value=3.1e-27 Score=248.15 Aligned_cols=215 Identities=29% Similarity=0.442 Sum_probs=175.9
Q ss_pred CCCCCCCCeeEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCCccEEEEeeCC
Q 006697 287 ASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDN 366 (635)
Q Consensus 287 ~~~~~~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~ 366 (635)
..++..+|+.++|+.+++++..++++++++|+|+.++. +.|+||++|.|+++|..
T Consensus 30 ~~~~~~~~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~-~~~~pGQ~v~l~~~~~~------------------------ 84 (314)
T 1fnb_A 30 NKFKPKTPYVGRCLLNTKITGDDAPGETWHMVFSHEGE-IPYREGQSVGVIPDGED------------------------ 84 (314)
T ss_dssp CSBBTTBCEEEEEEEEEECSCSSSSSCEEEEEEECTTC-CCCCTTCEEEEECSSBC------------------------
T ss_pred cccCCCCCEEEEEEEEEEecCCCCCCcEEEEEEecCCC-CCcCCCCEEEEecCCCC------------------------
Confidence 34667788999999999999877778999999998764 89999999999876520
Q ss_pred CCCCCCCCCCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhccCCCChhHHHHHHHhcCCCHHH
Q 006697 367 EDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLE 446 (635)
Q Consensus 367 ~~~~~~~~~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~s~~~~~~y~~~i~~~~~sl~d 446 (635)
.+|
T Consensus 85 ------------------------------------------------------------~~g----------------- 87 (314)
T 1fnb_A 85 ------------------------------------------------------------KNG----------------- 87 (314)
T ss_dssp ------------------------------------------------------------TTS-----------------
T ss_pred ------------------------------------------------------------cCC-----------------
Confidence 000
Q ss_pred HHHhCCCCCCChhhHHHHhcCCCCccccccCCCCCC---CCCeEEEEEEEEEecCCCCCcccCccchHHhhcCCCCCCCC
Q 006697 447 VMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRF---APDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGD 523 (635)
Q Consensus 447 vl~~f~s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~---~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~l~~g~~~~~ 523 (635)
.++++|+|||+|+|.. .++.++|+|+.+.|.++.|+...|.+|+||+++++|
T Consensus 88 --------------------~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk~~~y~~~~g~~~~G~~S~~L~~l~~G----- 142 (314)
T 1fnb_A 88 --------------------KPHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPG----- 142 (314)
T ss_dssp --------------------SBCCCEEEECCSCSSCTTSSSCEEEEEEECCEEECTTSCEEECHHHHHHHHCCTT-----
T ss_pred --------------------CcCCceeEecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCCchhhHhhcCCCC-----
Confidence 1236899999999863 257899999998777766766789999999999999
Q ss_pred ccEEEEEeeCCCC-cCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcC-CCCCcEEEEEeecCCCcccccHHHHHHHH
Q 006697 524 CSWAPIFIRPSNF-KLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDG-AQLGPALLFFGCRNRRMDFIYEDELNNFE 601 (635)
Q Consensus 524 ~~~v~i~~~~g~F-~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g-~~~~~~~LffG~R~~~~d~ly~del~~~~ 601 (635)
+.|.|.+|.|+| .+|.+..+|+||||+|||||||++|++++......+ ...++++||||||+++ |++|.+||++++
T Consensus 143 -d~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~R~~~-d~~~~~el~~l~ 220 (314)
T 1fnb_A 143 -AEVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSS-SLLYKEEFEKMK 220 (314)
T ss_dssp -CEEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCBTTBCCCSEEEEEEEESSGG-GCCSHHHHHHHH
T ss_pred -CEEEEEeccCCceeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHhccccccCCCCEEEEEecCCHH-HhhhHHHHHHHH
Confidence 899999999976 566555789999999999999999999987521100 0146899999999987 999999999999
Q ss_pred HcCC-ccEEEEEEecCCC----CcccchhHHhcc
Q 006697 602 EEGV-ISELILAFSREGS----QKEYVQHKMMDK 630 (635)
Q Consensus 602 ~~g~-~~~l~~a~SR~~~----~k~yVQd~l~~~ 630 (635)
+.+. ++++++++||++. .++|||++|.+.
T Consensus 221 ~~~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~ 254 (314)
T 1fnb_A 221 EKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQY 254 (314)
T ss_dssp HHCTTTEEEEEEETTTCBCTTCCBCCHHHHHHTT
T ss_pred HhCCCcEEEEEEECCCCcccCCCceechHHHHHh
Confidence 8765 7899999999754 578999998753
No 15
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=99.94 E-value=3.5e-27 Score=225.62 Aligned_cols=149 Identities=31% Similarity=0.498 Sum_probs=132.5
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHHH
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFY 162 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~ 162 (635)
+++++|+|+|+||||+++|+.|++.+.+. |+.++++++++++.++ +.+++.+||++||||.|++|+++..|+
T Consensus 9 ~~ki~I~Y~S~tGnT~~~A~~ia~~l~~~--g~~v~~~~~~~~~~~~------l~~~d~ii~g~pt~g~G~~p~~~~~f~ 80 (167)
T 1ykg_A 9 MPGITIISASQTGNARRVAEALRDDLLAA--KLNVKLVNAGDYKFKQ------IASEKLLIVVTSTQGEGEPPEEAVALH 80 (167)
T ss_dssp ---CEEEEECSSSHHHHHHHHHHHHHHHH--TCCCEEEEGGGCCGGG------GGGCSEEEEEEECBGGGBCCGGGHHHH
T ss_pred CCeEEEEEECCchHHHHHHHHHHHHHHHC--CCceEEeehhhCCHHH------hccCCeEEEEEcccCCCcCChhHHHHH
Confidence 67899999999999999999999999988 8889999999887766 788999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHHHHHHHHHHh
Q 006697 163 KWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQL 242 (635)
Q Consensus 163 ~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~ 242 (635)
++|.... ...+++++|+|||+||++|+|||.+++.++++|+++|++++.+.+++|+ ..++++.+|.+++++.|...
T Consensus 81 ~~l~~~~--~~~l~~k~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~~v~~~~~~d~--~~~~~~~~w~~~l~~~l~~~ 156 (167)
T 1ykg_A 81 KFLFSKK--APKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADV--EYQAAASEWRARVVDALKSR 156 (167)
T ss_dssp HHHTSTT--CCCCTTCEEEEEEECCTTSSSTTHHHHHHHHHHHHHTCEESSCCEEECT--TCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhcc--ccccCCCEEEEEeecCCCHHHHHHHHHHHHHHHHHCCCeEeecceecCC--CcHHHHHHHHHHHHHHHHhh
Confidence 9997631 1238899999999999999999999999999999999999999999883 57899999999999999754
Q ss_pred h
Q 006697 243 L 243 (635)
Q Consensus 243 ~ 243 (635)
.
T Consensus 157 ~ 157 (167)
T 1ykg_A 157 A 157 (167)
T ss_dssp C
T ss_pred c
Confidence 4
No 16
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=99.94 E-value=1.9e-26 Score=242.13 Aligned_cols=221 Identities=24% Similarity=0.311 Sum_probs=172.8
Q ss_pred CCCCCCCeeEEEEEeEEecCCCCCCc---------eEEEEEEecCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCCcc
Q 006697 288 SFDIHHPCRVNVAVRRELHKPDSDRS---------CIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLEL 358 (635)
Q Consensus 288 ~~~~~~p~~a~V~~~~~L~~~~~~r~---------~~hie~di~~~~l~Y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~ 358 (635)
.|...+|+.++|+.+++|+...+.+. +++|+|+.++..+.|+||++|.|+++|....
T Consensus 15 ~~~~~~~~~~~V~~~~~lt~~~~~~~~~~~e~~~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~-------------- 80 (314)
T 2rc5_A 15 LFKKSNPYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPE-------------- 80 (314)
T ss_dssp SBBTTBCEEEEEEEEEECSCCTTSSSCCSSSCCCCEEEEEEECCTTTCCCCTTCEEEEECSSBCHH--------------
T ss_pred CCCCCCCEEEEEEEeEEcCCccccccccccccCceEEEEEEeCCCCcCcccCCCEEEEECCCCccc--------------
Confidence 45667889999999999998766566 9999999887668999999999988764200
Q ss_pred EEEEeeCCCCCCCCCCCCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhccCCCChhHHHHHHH
Q 006697 359 LFSLHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVV 438 (635)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~s~~~~~~y~~~i~ 438 (635)
+. | ..++
T Consensus 81 ----------g~------------~--------------------------------------~~~~------------- 87 (314)
T 2rc5_A 81 ----------KK------------A--------------------------------------KGLA------------- 87 (314)
T ss_dssp ----------HH------------H--------------------------------------TTCS-------------
T ss_pred ----------cC------------c--------------------------------------cchh-------------
Confidence 00 0 0010
Q ss_pred hcCCCHHHHHHhCCCCCCChhhHHHHhcCCCCccccccCCCCCC---CCCeEEEEEEEEEecCCCCCc-ccCccchHHhh
Q 006697 439 ASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRF---APDRVHVTCALVYGPTPTGRI-HKGVCSTWMKN 514 (635)
Q Consensus 439 ~~~~sl~dvl~~f~s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~---~~~~i~ltv~~v~~~~~~g~~-~~G~~S~~L~~ 514 (635)
+| ++++|+|||+|+|.. +++.++|+|+++.+.++.|+. +.|.+|+||++
T Consensus 88 -----------~~----------------~~~~R~ySi~s~p~~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~L~~ 140 (314)
T 2rc5_A 88 -----------DV----------------GYTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCD 140 (314)
T ss_dssp -----------CC----------------BCCCEEEECCSCTTCGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHHHHT
T ss_pred -----------hc----------------CCCceeeeccCCccccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHHHhc
Confidence 11 157899999999852 367899999998766655553 47999999999
Q ss_pred cCCCCCCCCccEEEEEeeCCCCc-CCC-CCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccc
Q 006697 515 AIPLEGNGDCSWAPIFIRPSNFK-LPA-NPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFI 592 (635)
Q Consensus 515 l~~g~~~~~~~~v~i~~~~g~F~-lp~-~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~l 592 (635)
+++| +.|.|.+|.|.|. +|. +..+|+||||+|||||||++|++++.... .....++++||||||+++ |++
T Consensus 141 l~~G------d~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~l~~~~-~~~~~~~v~l~~g~r~~~-d~~ 212 (314)
T 2rc5_A 141 LKPG------DEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHK-LIKFTGNITLVYGAPYSD-ELV 212 (314)
T ss_dssp CCTT------CEEEEEEEECSSSCCCSSCBCSCEEEEEEGGGGHHHHHHHHHHHTTC-SSCBCSCEEEEEEESSGG-GSC
T ss_pred CCCc------CEEEEEeccCCceeCCCCCCCCCEEEEECCccHHHHHHHHHHHHHhc-ccCCCCcEEEEEEeCCHH-HHh
Confidence 9999 8999999999764 554 45689999999999999999999987521 001246899999999998 999
Q ss_pred cHHHHHHHHHcCCccEEEEEEecCCC-----CcccchhHHhcc
Q 006697 593 YEDELNNFEEEGVISELILAFSREGS-----QKEYVQHKMMDK 630 (635)
Q Consensus 593 y~del~~~~~~g~~~~l~~a~SR~~~-----~k~yVQd~l~~~ 630 (635)
|.+||+++++++.++++++++||++. .++|||++|.+.
T Consensus 213 ~~~el~~l~~~~~~~~~~~~~s~~~~~~~~g~~~~v~~~l~~~ 255 (314)
T 2rc5_A 213 MMDYLKGLESKHKNFKLITAISREEKNSFDGGRMYISHRVREQ 255 (314)
T ss_dssp SHHHHHHHHHHHSSEEEEEEETTTCBCTTTSSBCCHHHHHHHT
T ss_pred HHHHHHHHHHhCCcEEEEEEECCCCCcccCCCceehhHHHHHh
Confidence 99999999887567899999999743 468999998764
No 17
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=99.94 E-value=5.5e-26 Score=246.84 Aligned_cols=216 Identities=26% Similarity=0.376 Sum_probs=174.5
Q ss_pred CCCCCCCeeEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCCccEEEEeeCCC
Q 006697 288 SFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNE 367 (635)
Q Consensus 288 ~~~~~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~ 367 (635)
.|...+|+.++|+.+++++.+.++++++||+|++++..+.|+||+||.|++++..
T Consensus 116 ~~~~~~~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~------------------------- 170 (402)
T 2b5o_A 116 IYRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGED------------------------- 170 (402)
T ss_dssp SSCSSSCEEEEEEEEEECSCTTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSEE-------------------------
T ss_pred cccCCCCEEEEEEEEEEcCCCCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCCC-------------------------
Confidence 4667889999999999999877778999999998865699999999999876421
Q ss_pred CCCCCCCCCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhccCCCChhHHHHHHHhcCCCHHHH
Q 006697 368 DGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEV 447 (635)
Q Consensus 368 ~~~~~~~~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~s~~~~~~y~~~i~~~~~sl~dv 447 (635)
..|
T Consensus 171 -----------------------------------------------------------~~g------------------ 173 (402)
T 2b5o_A 171 -----------------------------------------------------------KNG------------------ 173 (402)
T ss_dssp -----------------------------------------------------------TTT------------------
T ss_pred -----------------------------------------------------------cCC------------------
Confidence 000
Q ss_pred HHhCCCCCCChhhHHHHhcCCCCccccccCCCCCC---CCCeEEEEEEEEEecCCC-CCcccCccchHHhhcCCCCCCCC
Q 006697 448 MAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRF---APDRVHVTCALVYGPTPT-GRIHKGVCSTWMKNAIPLEGNGD 523 (635)
Q Consensus 448 l~~f~s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~---~~~~i~ltv~~v~~~~~~-g~~~~G~~S~~L~~l~~g~~~~~ 523 (635)
.++++|+|||+|+|.. +++.++|+|+++.|.+|. ++...|.||+||+++++|.
T Consensus 174 -------------------~~~~~R~ySIas~p~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~G~---- 230 (402)
T 2b5o_A 174 -------------------KPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGT---- 230 (402)
T ss_dssp -------------------EECCCEEEEBCSCTTTTTTSSCEEEEEEECCEEECTTTCCEEECHHHHHHHTCCTTC----
T ss_pred -------------------CccCceeeeccCCCccccCCCCEEEEEEEEeeecccccCcCCCCchhHHHhhCCCCC----
Confidence 1136899999999863 257899999998776643 4456899999999998871
Q ss_pred ccEEEEEeeCCCC-cCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcC-CCCCcEEEEEeecCCCcccccHHHHHHHH
Q 006697 524 CSWAPIFIRPSNF-KLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDG-AQLGPALLFFGCRNRRMDFIYEDELNNFE 601 (635)
Q Consensus 524 ~~~v~i~~~~g~F-~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g-~~~~~~~LffG~R~~~~d~ly~del~~~~ 601 (635)
+.|.|.+|.|.| .+|.+..+|+||||+|||||||++|++++......+ ...++++||||||+++ |++|.+||++++
T Consensus 231 -d~v~v~gP~G~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l~~~~~~~~~~~~~v~L~~g~R~~~-d~~~~~eL~~l~ 308 (402)
T 2b5o_A 231 -DDVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTA-NILYKDDFEKMA 308 (402)
T ss_dssp -CCEEEEEEECSTTCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCCSSCCCCSEEEEEEEESSGG-GCTTHHHHHHHH
T ss_pred -ceEEEEcccCCcccCCccCCCCEEEEEcccCHHHHHHHHHHHHHhccccccccCCEEEEEecCCHH-HhHHHHHHHHHH
Confidence 489999999965 567666789999999999999999999987521000 0147899999999988 999999999999
Q ss_pred HcCC-ccEEEEEEecCCC----CcccchhHHhcc
Q 006697 602 EEGV-ISELILAFSREGS----QKEYVQHKMMDK 630 (635)
Q Consensus 602 ~~g~-~~~l~~a~SR~~~----~k~yVQd~l~~~ 630 (635)
+.+. ++++++++||++. .++|||++|.+.
T Consensus 309 ~~~~~~~~v~~~~S~~~~~~~g~~~~v~~~l~~~ 342 (402)
T 2b5o_A 309 AENPDNFRLTYAISREQKTADGGKVYVQSRVSEY 342 (402)
T ss_dssp HHCTTTEEEEEEETTTCBCTTSCBCCHHHHHHHT
T ss_pred HhCCCcEEEEEEECCCCcccCCCccchHHHHHHh
Confidence 8875 7899999999753 578999998764
No 18
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=99.93 E-value=3.2e-27 Score=220.76 Aligned_cols=144 Identities=24% Similarity=0.315 Sum_probs=128.3
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHHH
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFY 162 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~ 162 (635)
+++++|+|+|+||||+++|+.|++++.+. ++.++++++. +..+ +.+++.+||++||||.|++|+++..|+
T Consensus 1 M~ki~I~Y~S~tGnT~~~A~~ia~~l~~~--g~~v~~~~~~--~~~~------l~~~d~vi~g~pt~g~g~~p~~~~~f~ 70 (147)
T 2hna_A 1 MADITLISGSTLGGAEYVAEHLAEKLEEA--GFTTETLHGP--LLED------LPASGIWLVISSTHGAGDIPDNLSPFY 70 (147)
T ss_dssp CCSEEEECCTTSCCCHHHHHHHHHHHHHT--TCCEEEECCT--TSCS------SCSEEEEEEECCTTTTCCTTSSCHHHH
T ss_pred CCeEEEEEECCchHHHHHHHHHHHHHHHC--CCceEEecCC--CHHH------cccCCeEEEEECccCCCCCChhHHHHH
Confidence 46899999999999999999999999887 7888887764 3344 778899999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCC--CchHHHHHHHHHHHHHH
Q 006697 163 KWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQ--CIEDDFTAWRELVWPEL 239 (635)
Q Consensus 163 ~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~--~~e~~f~~W~~~l~~~L 239 (635)
++|..... .+++++|+|||+||++|+|||.+++.++++|+++|++++.+.+++|... +.++++.+|.+++++.|
T Consensus 71 ~~l~~~~~---~l~~~~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~~~~~~d~~~~~~~~~~~~~w~~~~~~~l 146 (147)
T 2hna_A 71 EALQEQKP---DLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWVNLL 146 (147)
T ss_dssp HHHHHHCC---CTTEEEEEEESCCHHHHSCSSSCTTHHHHHHHHHTCEECSSCBCCCCSSCCSSCSCCHHHHHHHHHHH
T ss_pred HHHHhhcc---ccCCCEEEEEecccCCHHHHHHHHHHHHHHHHHcCCeEeeeeEEEecCCCCCcHHHHHHHHHHHHHHh
Confidence 99976422 2889999999999999999999999999999999999999999998764 67899999999999876
No 19
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=99.92 E-value=3.2e-25 Score=207.03 Aligned_cols=143 Identities=22% Similarity=0.309 Sum_probs=127.7
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhc-cCCeEEEEEecCCC--CCCChhHH
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLK-KETLAFFMVATYGD--GEPTDNAA 159 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~-~~~~vif~~sTyg~--G~~p~na~ 159 (635)
|++++|+|+|+||||+++|+.|++.+.+. |++++++++++++.++ +. +++.+||++||||. |++|+++.
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~--g~~v~~~~~~~~~~~~------l~~~~d~ii~g~pty~~~~G~~p~~~~ 72 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAG--GHEVTLLNAADASAEN------LADGYDAVLFGCSAWGMEDLEMQDDFL 72 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTT--TCEEEEEETTTBCCTT------TTTTCSEEEEEECEECSSSCEECHHHH
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhC--CCeEEEEehhhCCHhH------hcccCCEEEEEecccCCCCCCCcHHHH
Confidence 47899999999999999999999999988 8899999999998877 77 89999999999998 99999999
Q ss_pred HHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCC-CchHHHHHHHHHHHHH
Q 006697 160 RFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQ-CIEDDFTAWRELVWPE 238 (635)
Q Consensus 160 ~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~-~~e~~f~~W~~~l~~~ 238 (635)
.|+++|.... +++++++|||+||++|+|||.+++.+++.|+++|++++.+...++... ...+.+.+|.+++++.
T Consensus 73 ~fl~~l~~~~-----l~~k~~~vfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~ 147 (148)
T 3f6r_A 73 SLFEEFDRIG-----LAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIAEGLKMEGDASNDPEAVASFAEDVLKQ 147 (148)
T ss_dssp HHHTTGGGTC-----CTTCEEEEEEEECTTSSSTTTHHHHHHHHHHHTTCEECSCCEEEESSGGGCHHHHHHHHHHHHHT
T ss_pred HHHHHhhccC-----CCCCEEEEEEeCCCCHHHHHHHHHHHHHHHHHcCCEEeecceEeecCcchHHHHHHHHHHHHHhh
Confidence 9999997643 889999999999999999999999999999999999998887776532 2667888888877653
No 20
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=99.92 E-value=4.7e-24 Score=223.55 Aligned_cols=216 Identities=25% Similarity=0.358 Sum_probs=166.7
Q ss_pred CCCCCCCeeEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCCccEEEEeeCCC
Q 006697 288 SFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNE 367 (635)
Q Consensus 288 ~~~~~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~ 367 (635)
.++...++.++|+..+.++.++...++++++|..+. .+.|+||.||.|..+... .
T Consensus 22 ~~~~~~~~~~~V~~~~~~t~~~~~~~v~~~~l~~~~-~~~~~pGQ~v~l~~~~~~------------------------~ 76 (311)
T 3lo8_A 22 TYKPKEPFTATIVSVESLVGPKAPGETCHIVIDHGG-NVPYWEGQSYGVIPPGEN------------------------P 76 (311)
T ss_dssp SBBTTBCEEEEEEEEEECSCTTSSSCEEEEEEECTT-SSCCCTTCEEEEECSSBC------------------------T
T ss_pred ccCCCCCeEEEEEeeEeccCCCCCCccEEEEEeCCC-CCcccCCCEEEEeCCCCc------------------------c
Confidence 356678899999999999865555689999999875 589999999988653210 0
Q ss_pred CCCCCCCCCCCCCCCcccHHHHHhhhhccCCcccHHHHHHHHHhCCCHHHHHHHhhccCCCChhHHHHHHHhcCCCHHHH
Q 006697 368 DGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEV 447 (635)
Q Consensus 368 ~~~~~~~~~~~pfp~p~tl~~~l~~~~Dl~~~p~~~~l~~La~~~~d~~~k~~L~~l~s~~~~~~y~~~i~~~~~sl~dv 447 (635)
. ..|
T Consensus 77 -----------------------------~-----------------------------~~g------------------ 80 (311)
T 3lo8_A 77 -----------------------------K-----------------------------KPG------------------ 80 (311)
T ss_dssp -----------------------------T-----------------------------STT------------------
T ss_pred -----------------------------c-----------------------------cCC------------------
Confidence 0 000
Q ss_pred HHhCCCCCCChhhHHHHhcCCCCccccccCCCCCC---CCCeEEEEEEEEEecCCCC----CcccCccchHHhhcCCCCC
Q 006697 448 MAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRF---APDRVHVTCALVYGPTPTG----RIHKGVCSTWMKNAIPLEG 520 (635)
Q Consensus 448 l~~f~s~~~p~~~ll~~~~p~l~pR~YSIsSsp~~---~~~~i~ltv~~v~~~~~~g----~~~~G~~S~~L~~l~~g~~ 520 (635)
.++++|+|||+|+|.. +++.++|+|+++.+..+.. +...|.+|+||+++++|
T Consensus 81 -------------------~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~~~~~G~~S~~L~~l~~G-- 139 (311)
T 3lo8_A 81 -------------------APQNVRLYSIASTRYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPG-- 139 (311)
T ss_dssp -------------------CBCCCEEEEBCSCTTTTTTSSSEEEEEEECCCCCCTTTCCCCGGGSCHHHHHHHTCCTT--
T ss_pred -------------------CCCCceeeEecCCCcccCCCCCEEEEEEEEEEecccccCcCCcCCCCchhhHHhcCCCc--
Confidence 2247899999999964 2578999999865433321 23579999999999999
Q ss_pred CCCccEEEEEeeCCCCcCCC--CCCCcEEEEecCCCchhHHHHHHHHHHHHhcC-CCCCcEEEEEeecCCCcccccHHHH
Q 006697 521 NGDCSWAPIFIRPSNFKLPA--NPSVPIIMVGPGTGLAPFRGFLQERMALKQDG-AQLGPALLFFGCRNRRMDFIYEDEL 597 (635)
Q Consensus 521 ~~~~~~v~i~~~~g~F~lp~--~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g-~~~~~~~LffG~R~~~~d~ly~del 597 (635)
+.|.|.+|.|.|.+.. +..+|+||||+|||||||++||+++......+ ...++++||||||+.+ |++|.+||
T Consensus 140 ----d~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~l~~g~r~~~-d~~~~~el 214 (311)
T 3lo8_A 140 ----DKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSD-SLLYDEEF 214 (311)
T ss_dssp ----CEEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTEECTTCCCCSEEEEEEEESSGG-GCSSHHHH
T ss_pred ----CEEEEEeccCCcccCCCcCCCCCEEEEECCEEHHHHHHHHHHHHHhccccccCCCCEEEEEecCChH-HhhHHHHH
Confidence 8999999999776533 35689999999999999999999987521111 0136899999999988 99999999
Q ss_pred HHHHHcCC-ccEEEEEEecCCC----CcccchhHHhcc
Q 006697 598 NNFEEEGV-ISELILAFSREGS----QKEYVQHKMMDK 630 (635)
Q Consensus 598 ~~~~~~g~-~~~l~~a~SR~~~----~k~yVQd~l~~~ 630 (635)
+++++.+. .+++++++||++. .++|||++|.+.
T Consensus 215 ~~l~~~~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~ 252 (311)
T 3lo8_A 215 TSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEY 252 (311)
T ss_dssp HHHHHHCTTTEEEEEEETTTC-------CCHHHHHHHT
T ss_pred HHHHHhCCCcEEEEEEECCCCcccCCCcceehHHHHHH
Confidence 99998875 7899999999865 478999998865
No 21
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=99.90 E-value=3.1e-23 Score=193.20 Aligned_cols=142 Identities=24% Similarity=0.300 Sum_probs=126.6
Q ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhcc-CCeEEEEEecCCCCC--CChhHHH
Q 006697 84 TKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKK-ETLAFFMVATYGDGE--PTDNAAR 160 (635)
Q Consensus 84 ~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~-~~~vif~~sTyg~G~--~p~na~~ 160 (635)
|+++|+|+|+||||+++|+.|++.+.+. |++++++++++.+.++ +.+ ++.+||++||||.|. +|+++..
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~--g~~v~~~~~~~~~~~~------l~~~~d~ii~~~p~y~~g~~~~p~~~~~ 72 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADA--GYEVDSRDAASVEAGG------LFEGFDLVLLGCSTWGDDSIELQDDFIP 72 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHH--TCEEEEEEGGGCCSTT------TTTTCSEEEEEECEECSSSCEECTTTHH
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhc--CCeeEEEehhhCCHHH------hcCcCCEEEEEeCCCCCCCcCCChhHHH
Confidence 5899999999999999999999999988 8899999999887766 778 999999999999999 9999999
Q ss_pred HHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCCC-chHHHHHHHHHHHHH
Q 006697 161 FYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQC-IEDDFTAWRELVWPE 238 (635)
Q Consensus 161 F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~-~e~~f~~W~~~l~~~ 238 (635)
|++++.... ++++++++||+||++|++||.+.+.+++.|+++|++++.+...+|...+ ..+.+.+|.+++++.
T Consensus 73 fl~~l~~~~-----l~~k~~~v~~~g~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~ 146 (147)
T 1f4p_A 73 LFDSLEETG-----AQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARDDIVGWAHDVRGA 146 (147)
T ss_dssp HHHTGGGSC-----CTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECSCCEEEESCGGGGHHHHHHHHHHHHTT
T ss_pred HHHHHHhcc-----cCCCEEEEEeecCCChHHHHHHHHHHHHHHHHcCCeEhhcccccccCchhHHHHHHHHHHHHHhh
Confidence 999997643 8899999999999999999999999999999999999988777765422 567899999887643
No 22
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.86 E-value=5.7e-22 Score=201.02 Aligned_cols=153 Identities=18% Similarity=0.230 Sum_probs=131.2
Q ss_pred CChhhHHHHhcCC-CCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHh-hcCCCCCCCCccEEEEEeeC
Q 006697 456 PPIGVFFAAVAPH-LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMK-NAIPLEGNGDCSWAPIFIRP 533 (635)
Q Consensus 456 ~p~~~ll~~~~p~-l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~-~l~~g~~~~~~~~v~i~~~~ 533 (635)
..+||++.+.+|. ..+|+|||+|+|.. .+.++|+|+++. .|.+|+||+ ++++| +.|.|.+|.
T Consensus 44 ~~pGQ~v~l~~~~~~~~R~ySi~s~~~~-~~~l~i~vk~~~---------~G~~s~~l~~~l~~G------d~v~v~gP~ 107 (250)
T 1tvc_A 44 FEPGQFMDLTIPGTDVSRSYSPANLPNP-EGRLEFLIRVLP---------EGRFSDYLRNDARVG------QVLSVKGPL 107 (250)
T ss_dssp CCSCCEEEECTTSCSSSEEECCBCCSSS-SCCEEEEECCCT---------TSSSHHHHHHHSSSS------SEEEEEEEE
T ss_pred cCCCcEEEEEeCCCccccccccCCCCCC-CCeEEEEEEECC---------CCCchHHHHhcCCCC------CEEEEEcCc
Confidence 4789998887665 57899999999864 578999998742 599999996 79999 899999999
Q ss_pred CCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccEEEEEE
Q 006697 534 SNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAF 613 (635)
Q Consensus 534 g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~l~~a~ 613 (635)
|+|.++.+..+++||||+|||||||++|+++.... + ...+++|+||+|+.+ |++|.+||+++++...++++++++
T Consensus 108 G~~~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~---~-~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~ 182 (250)
T 1tvc_A 108 GVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEW---T-APNETRIYFGVNTEP-ELFYIDELKSLERSMRNLTVKACV 182 (250)
T ss_dssp CCCSCCCCSSSCEEEEEESSTTHHHHHHHHHHHHH---T-CCSCEEEEEECSSST-TCCCHHHHHHHHHHSSSCEEEECC
T ss_pred cccccCccCCceEEEEEeccCHHHHHHHHHHHHhc---C-CCceEEEEEEeCCHH-HhhhHHHHHHHHHhCCCeEEEEEe
Confidence 99998866568999999999999999999998762 2 457899999999999 999999999999877778999999
Q ss_pred ecCCC----CcccchhHHhc
Q 006697 614 SREGS----QKEYVQHKMMD 629 (635)
Q Consensus 614 SR~~~----~k~yVQd~l~~ 629 (635)
||+++ .++||++.+.+
T Consensus 183 s~~~~~~~g~~g~v~~~l~~ 202 (250)
T 1tvc_A 183 WHPSGDWEGEQGSPIDALRE 202 (250)
T ss_dssp SSCSSCCSSSSSSSSHHHHH
T ss_pred ccCCCCcCCccceehHHHHh
Confidence 98643 57899988764
No 23
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.86 E-value=5.9e-22 Score=205.06 Aligned_cols=148 Identities=16% Similarity=0.303 Sum_probs=121.2
Q ss_pred CCccccccCCCCCCCCCeEEEEEEEEEec--C--CC--CCcccCccchHHhhcCCCCCCCCccEEEEEeeCCCCcCCCCC
Q 006697 469 LQPRYYSISSSPRFAPDRVHVTCALVYGP--T--PT--GRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANP 542 (635)
Q Consensus 469 l~pR~YSIsSsp~~~~~~i~ltv~~v~~~--~--~~--g~~~~G~~S~~L~~l~~g~~~~~~~~v~i~~~~g~F~lp~~~ 542 (635)
..+|+|||+|+|.. .+.++|+|+++..+ + +. .+...|.+|+||+++++| +.|.|.+|.|+|.++. .
T Consensus 84 ~~~R~ySi~s~~~~-~~~l~l~v~~~~~~~~~~~~~~~~~~~~G~~S~~l~~l~~G------d~v~v~gP~G~f~~~~-~ 155 (290)
T 2r6h_A 84 ETVRAYSMANYPAE-GNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPG------DKVMMSGPYGDFHIQD-T 155 (290)
T ss_dssp CEEEEEECCSCTTC-CSEEEEEEECCCCCEETTTTEECTTCCCCHHHHHHTTCCTT------CEEEEEEEECCCCCCS-S
T ss_pred CcceeeeccCCCCC-CCEEEEEEEEeccccccccccccccCCCcchhhHHhcCCCC------CEEEEEecccCCcCCC-C
Confidence 56899999999865 57899999874211 0 00 012369999999999999 8999999999998873 5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccEEEEEEecCCC----
Q 006697 543 SVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREGS---- 618 (635)
Q Consensus 543 ~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~l~~a~SR~~~---- 618 (635)
.+|+||||+|||||||++|+++++.. .....+++||||||+++ |++|.+||+++++.+.++++++++||+..
T Consensus 156 ~~~~vliagGtGitP~~s~l~~~~~~---~~~~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~ 231 (290)
T 2r6h_A 156 DAEMLYIGGGAGMAPLRAQILHLFRT---LKTGRKVSYWYGARSKN-EIFYEEDFREIEREFPNFKFHIALSDPQPEDNW 231 (290)
T ss_dssp SCEEEEEEEGGGHHHHHHHHHHHHHT---SCCCSCEEEEEEESSGG-GCCSHHHHHHHHHHCTTEEEEEEESSCCGGGCC
T ss_pred CCeEEEEECccCHHHHHHHHHHHHHh---cCCCCcEEEEEEcCCHH-HHHHHHHHHHHHHhCCCeEEEEEEccCCcccCC
Confidence 67999999999999999999998762 11357999999999998 99999999999988778899999998743
Q ss_pred --CcccchhHHh
Q 006697 619 --QKEYVQHKMM 628 (635)
Q Consensus 619 --~k~yVQd~l~ 628 (635)
.++||++.+.
T Consensus 232 ~g~~g~v~~~~~ 243 (290)
T 2r6h_A 232 TGYVGFIHQVIY 243 (290)
T ss_dssp CSCBSCHHHHHH
T ss_pred CCeeEecCHHHH
Confidence 3689998774
No 24
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus}
Probab=99.86 E-value=2.4e-22 Score=194.46 Aligned_cols=145 Identities=21% Similarity=0.404 Sum_probs=123.6
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCC-------
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPT------- 155 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p------- 155 (635)
|++++|+|+|+||||+++|+.|++.+... +.++++++++.+.++ +.+++++||++||||.|++|
T Consensus 1 M~kilIiY~S~tGnT~~iA~~ia~~l~~~---~~v~~~~~~~~~~~~------l~~~d~ii~g~pty~~G~~pg~~~~~~ 71 (182)
T 2wc1_A 1 MAKIGLFFGSDTGTTRKIAKQIKDMFDDE---VMAKPLNVNRADVAD------FMAYDFLILGTPTLGDGQLPGLSANAA 71 (182)
T ss_dssp CCSEEEEECCSSSHHHHHHHHHHTTSCTT---TBCCCEEGGGCCHHH------HHHCSEEEEEEECBTTTBCSSGGGTCS
T ss_pred CcEEEEEEECCCchHHHHHHHHHHHhccc---CceEEEEcccCCHHH------HhhCCeEEEEEeeCCCCCCCccccccc
Confidence 46899999999999999999999998642 347778888776555 78899999999999999999
Q ss_pred -hhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcc-h-hHHHHHHHHHHHHHHHCCCEEeecc-----------------
Q 006697 156 -DNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQ-Y-EHFNKIGIVLDEELCKQGGARLVPL----------------- 215 (635)
Q Consensus 156 -~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~-Y-~~f~~~~k~ld~~L~~lGa~~v~~~----------------- 215 (635)
+++..|+++|.... ++++++++||+|++. | ++||.+.+.+++.|.++|++++.+.
T Consensus 72 ~~~~~~f~~~l~~~~-----l~gk~~avfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v~~~~~~g~~~~~~~~~~~~~ 146 (182)
T 2wc1_A 72 SESWEEFLPRIADQD-----FSGKTIALFGLGDQVTYPLEFVNALFFLHEFFSDRGANVVGRWPAKGYGFEDSLAVVEGE 146 (182)
T ss_dssp SCCHHHHGGGGTTCC-----CTTCEEEEEEECCTTTCTTSTTTHHHHHHHHHHTTTCEEECCEECTTSCCSCCTTEETTE
T ss_pred hhHHHHHHHHhhhcc-----CCCCEEEEEEeCCCcccchhHHHHHHHHHHHHHHCCCEEEEeecCCCcCcccchhhhcCc
Confidence 99999999987633 889999999999998 8 5899999999999999999998863
Q ss_pred --eeecC-CC---CchHHHHHHHHHHHHHHHH
Q 006697 216 --GLGDD-DQ---CIEDDFTAWRELVWPELDQ 241 (635)
Q Consensus 216 --g~gD~-~~---~~e~~f~~W~~~l~~~L~~ 241 (635)
|++.+ .+ ..++++++|.++||++|..
T Consensus 147 ~~gl~~d~~~~~~~~~~~~~~w~~~l~~~l~~ 178 (182)
T 2wc1_A 147 FLGLALDQDNQAALTPERLKGWLSLIAADFGL 178 (182)
T ss_dssp ESSEEECTTTCGGGHHHHHHHHHHHTHHHHTC
T ss_pred eeeeeccCCCCccccHHHHHHHHHHHHHHHhc
Confidence 66533 22 3588999999999999864
No 25
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=99.86 E-value=4.2e-22 Score=192.33 Aligned_cols=143 Identities=20% Similarity=0.364 Sum_probs=121.7
Q ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCC--------
Q 006697 84 TKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPT-------- 155 (635)
Q Consensus 84 ~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p-------- 155 (635)
++++|+|+|+||||+++|+.|++.+.. ++.++++++++.+.++ +.+++.+||++||||.|++|
T Consensus 1 ~kilI~Y~S~tGnT~~iA~~ia~~l~~---~~~v~~~~~~~~~~~~------l~~~d~iilg~pt~~~G~~pg~~~~~~~ 71 (179)
T 1yob_A 1 AKIGLFFGSNTGKTRKVAKSIKKRFDD---ETMSDALNVNRVSAED------FAQYQFLILGTPTLGEGELPGLSSDAEN 71 (179)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHTTSCT---TTBCCCEEGGGCCHHH------HHTCSEEEEEEECBTTTBCSSGGGTCSS
T ss_pred CeEEEEEECCCcHHHHHHHHHHHHhCC---CCceEEEEhhhCCHHH------HhcCCEEEEEeccCCCCcCCcccccccc
Confidence 579999999999999999999999853 3457778888776555 78899999999999999999
Q ss_pred hhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcc-hh-HHHHHHHHHHHHHHHCCCEEeecc------------------
Q 006697 156 DNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQ-YE-HFNKIGIVLDEELCKQGGARLVPL------------------ 215 (635)
Q Consensus 156 ~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~-Y~-~f~~~~k~ld~~L~~lGa~~v~~~------------------ 215 (635)
+++..|+++|.... ++++++++||+||+. |. +||.+.+.+++.|+++|++++.+.
T Consensus 72 ~~~~~fl~~l~~~~-----l~gk~~a~fg~g~~~~y~~~~~~a~~~l~~~l~~~G~~~~~~~~~~g~~~~~s~~~~~~~f 146 (179)
T 1yob_A 72 ESWEEFLPKIEGLD-----FSGKTVALFGLGDQVGYPENYLDALGELYSFFKDRGAKIVGSWSTDGYEFESSEAVVDGKF 146 (179)
T ss_dssp CCHHHHHHHHTTCC-----CTTCEEEEEEECCTTTCTTTTTHHHHHHHHHHHTTTCEEECCBCCTTCCCSCCTTBSSSSB
T ss_pred hHHHHHHHHhhhcc-----cCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEeeccCCCCcccchhhhcCce
Confidence 99999999997643 889999999999998 94 799999999999999999998764
Q ss_pred -ee-ecCCC---CchHHHHHHHHHHHHHHH
Q 006697 216 -GL-GDDDQ---CIEDDFTAWRELVWPELD 240 (635)
Q Consensus 216 -g~-gD~~~---~~e~~f~~W~~~l~~~L~ 240 (635)
|+ .|.+. ..++++++|.++++++|.
T Consensus 147 ~gl~~d~~~~~~~~~~~i~~w~~~l~~~~~ 176 (179)
T 1yob_A 147 VGLALDLDNQSGKTDERVAAWLAQIAPEFG 176 (179)
T ss_dssp SSEEECTTTCGGGHHHHHHHHHHHHGGGGT
T ss_pred eccccCCCCCCcccHHHHHHHHHHHHHHHh
Confidence 44 34321 468999999999987664
No 26
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.86 E-value=8.4e-22 Score=197.30 Aligned_cols=155 Identities=14% Similarity=0.175 Sum_probs=128.1
Q ss_pred CCChhhHHHHhcCCCCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchH-HhhcCCCCCCCCccEEEEEeeC
Q 006697 455 TPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTW-MKNAIPLEGNGDCSWAPIFIRP 533 (635)
Q Consensus 455 ~~p~~~ll~~~~p~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~-L~~l~~g~~~~~~~~v~i~~~~ 533 (635)
...+||++.+.+|...+|+|||+|+|.. ++.++|+|+++. .|.+|+| +.++++| +.|.|.+|.
T Consensus 29 ~~~pGq~v~l~~~~~~~R~ySi~s~~~~-~~~l~l~i~~~~---------~G~~s~~~~~~l~~G------d~v~v~gP~ 92 (232)
T 1qfj_A 29 SFRAGQYLMVVMDERDKRPFSMASTPDE-KGFIELHIGASE---------INLYAKAVMDRILKD------HQIVVDIPH 92 (232)
T ss_dssp CCCTTCEEEEESSSSCEEEEECCSCTTS-TTCEEEEEC---------------CCHHHHHHHHHH------SEEEEEEEE
T ss_pred CcCCCCEEEEECCCCceeeeecCCCCCC-CCcEEEEEEEcc---------CCchhHHHHHhCCCC------CEEEEeCCc
Confidence 3478999998778788999999999864 578999998854 4666665 6679999 899999999
Q ss_pred CCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccEEEEEE
Q 006697 534 SNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAF 613 (635)
Q Consensus 534 g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~l~~a~ 613 (635)
|+|.++.+..+|+||||+|||||||+++++++... + ...+++|+||+|+.+ |++|.+||++++++..+++++.++
T Consensus 93 G~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~---~-~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~ 167 (232)
T 1qfj_A 93 GEAWLRDDEERPMILIAGGTGFSYARSILLTALAR---N-PNRDITIYWGGREEQ-HLYDLCELEALSLKHPGLQVVPVV 167 (232)
T ss_dssp CSCCCCSCSSSCEEEEEETTCHHHHHHHHHHHHHH---C-TTCCEEEEEEESSGG-GCTTHHHHHHHHHHCTTEEEEEEE
T ss_pred cceEeCCCCCCcEEEEEecccHhHHHHHHHHHHhc---C-CCCcEEEEEeeCCHH-HhhhHHHHHHHHHHCCCeEEEEEE
Confidence 99998866668999999999999999999998762 2 457999999999998 999999999999887788999999
Q ss_pred ecCCC----CcccchhHHhcc
Q 006697 614 SREGS----QKEYVQHKMMDK 630 (635)
Q Consensus 614 SR~~~----~k~yVQd~l~~~ 630 (635)
||+++ .++||++.+.+.
T Consensus 168 s~~~~~~~g~~g~v~~~~~~~ 188 (232)
T 1qfj_A 168 EQPEAGWRGRTGTVLTAVLQD 188 (232)
T ss_dssp SSCCTTCCSEESCHHHHHHHH
T ss_pred cCCCCCcCCceeeHHHHHHHh
Confidence 98654 468999888653
No 27
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=99.86 E-value=2.6e-21 Score=185.67 Aligned_cols=140 Identities=27% Similarity=0.428 Sum_probs=119.1
Q ss_pred eEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCC-CcCchHHHhhhccCCeEEEEEecCCCCCC----ChhHH
Q 006697 85 KVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDY-AMDDEQYEEKLKKETLAFFMVATYGDGEP----TDNAA 159 (635)
Q Consensus 85 ~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~-~~~~~~~~~~l~~~~~vif~~sTyg~G~~----p~na~ 159 (635)
+++|+|+|+||||+++|+.|++.+... .+++++++++ +..+ +.+++.+||++||||.|++ |+++.
T Consensus 1 ki~I~Y~S~tGnT~~vA~~ia~~l~~~----~~~~~~~~~~~~~~~------l~~~d~ii~g~pt~~~G~~~~~~p~~~~ 70 (173)
T 2fcr_A 1 KIGIFFSTSTGNTTEVADFIGKTLGAK----ADAPIDVDDVTDPQA------LKDYDLLFLGAPTWNTGADTERSGTSWD 70 (173)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHGGG----BCCCEEGGGCSCGGG------GGGCSEEEEEEECCSTTCSSCCSCSTHH
T ss_pred CEEEEEECCCchHHHHHHHHHHHhccC----CcEEEehhhcCChhH------HccCCEEEEEEeecCCCCcCccCcHHHH
Confidence 589999999999999999999999754 3667888877 5555 8889999999999999999 99999
Q ss_pred HHH-HHHhcCCCCCCCCCCceEEEEEecCcc-h-hHHHHHHHHHHHHHHHCCCEEeecc-------------------ee
Q 006697 160 RFY-KWFTEGNDRGPWLQQLKFGVFGLGNRQ-Y-EHFNKIGIVLDEELCKQGGARLVPL-------------------GL 217 (635)
Q Consensus 160 ~F~-~~L~~~~~~~~~l~~~~~aVFGlGds~-Y-~~f~~~~k~ld~~L~~lGa~~v~~~-------------------g~ 217 (635)
.|+ +.|.... +++++++|||+||+. | +|||.+++.+++.|+++|++++.+. ++
T Consensus 71 ~fl~~~l~~~~-----l~gk~~avfg~g~~~~y~~~f~~a~~~l~~~l~~~G~~~~~~~~~~g~~~~~s~~~~~~~~~~l 145 (173)
T 2fcr_A 71 EFLYDKLPEVD-----MKDLPVAIFGLGDAEGYPDNFCDAIEEIHDCFAKQGAKPVGFSNPDDYDYEESKSVRDGKFLGL 145 (173)
T ss_dssp HHHHHTGGGCC-----CTTCEEEEEEEECTTTCTTSTTTHHHHHHHHHHHTTCEEECCBCGGGSCCSCCTTEETTEESSE
T ss_pred HHHHhhccccc-----cCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEEeecccCCcccccchhhhCCeeeee
Confidence 999 8887543 889999999999999 8 6999999999999999999998762 22
Q ss_pred -ecC--C-CCchHHHHHHHHHHHHHH
Q 006697 218 -GDD--D-QCIEDDFTAWRELVWPEL 239 (635)
Q Consensus 218 -gD~--~-~~~e~~f~~W~~~l~~~L 239 (635)
.|. . +..++.+++|.+++++.|
T Consensus 146 ~~~~~~~~~~~~~~i~~w~~~i~~~~ 171 (173)
T 2fcr_A 146 PLDMVNDQIPMEKRVAGWVEAVVSET 171 (173)
T ss_dssp EEETTTCSSCHHHHHHHHHHHHHHHH
T ss_pred eecCCCCccccHHHHHHHHHHHHHHh
Confidence 122 2 246889999999998776
No 28
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=99.85 E-value=4.2e-22 Score=189.36 Aligned_cols=138 Identities=22% Similarity=0.399 Sum_probs=115.1
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHHH
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFY 162 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~ 162 (635)
+++++|+|+|+||||+++|+.|++.+ |. ++++++++++.++ +.+++.+||++||||.|++|+++..|+
T Consensus 1 M~k~~I~Y~S~tGnT~~~A~~ia~~l-----g~-~~~~~~~~~~~~~------l~~~d~ii~g~pt~~~g~~p~~~~~f~ 68 (164)
T 2bmv_A 1 MGKIGIFFGTDSGNAEAIAEKISKAI-----GN-AEVVDVAKASKEQ------FNSFTKVILVAPTAGAGDLQTDWEDFL 68 (164)
T ss_dssp -CCEEEEECCSSSHHHHHHHHHHHHH-----CS-EEEEEGGGCCHHH------HTTCSEEEEEEEEETTTEECHHHHHHH
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHc-----CC-cEEEecccCCHhH------HhhCCEEEEEECCcCCCcCcHHHHHHH
Confidence 46899999999999999999999998 34 7889998887655 788999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCceEEEEEecCcc-hh-HHHHHHHHHHHHHHHCCCEEeecc-------------------eeecCC
Q 006697 163 KWFTEGNDRGPWLQQLKFGVFGLGNRQ-YE-HFNKIGIVLDEELCKQGGARLVPL-------------------GLGDDD 221 (635)
Q Consensus 163 ~~L~~~~~~~~~l~~~~~aVFGlGds~-Y~-~f~~~~k~ld~~L~~lGa~~v~~~-------------------g~gD~~ 221 (635)
++|.... +++++++|||+||+. |+ +||.+++.++++|++ ++++.+. +...+.
T Consensus 69 ~~l~~~~-----l~~k~~avf~~G~~~~y~~~~~~a~~~l~~~l~~--~~~~~~~~~~g~~~~~s~~~~~~~~~~l~~~~ 141 (164)
T 2bmv_A 69 GTLEASD-----FANKTIGLVGLGDQDTYSETFAEGIFHIYEKAKA--GKVVGQTSTDGYHFEASKAVEGGKFVGLVIDE 141 (164)
T ss_dssp TTCCTHH-----HHTSEEEEEEECCTTTCTTSTTTHHHHHHHHHTT--SEECCCEESTTCCCSCCTTEETTEESSEEECT
T ss_pred HHHhhhh-----cCCCEEEEEEeCCcchhhHHHhHHHHHHHHHHhh--CEEEccccCCCccccchhhhhcCcccCccCCC
Confidence 9886432 789999999999996 97 599999999999988 8887763 343332
Q ss_pred C----CchHHHHHHHHHHHHHH
Q 006697 222 Q----CIEDDFTAWRELVWPEL 239 (635)
Q Consensus 222 ~----~~e~~f~~W~~~l~~~L 239 (635)
. ..++.+++|.+++++.|
T Consensus 142 ~~~~~~~~~~~~~w~~~l~~~l 163 (164)
T 2bmv_A 142 DNQDDLTDERISKWVEQVKGSF 163 (164)
T ss_dssp TTCGGGHHHHHHHHHHHHTTTC
T ss_pred CCccccCHHHHHHHHHHHHHhh
Confidence 1 35788999999886543
No 29
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.85 E-value=1.2e-21 Score=197.64 Aligned_cols=152 Identities=18% Similarity=0.201 Sum_probs=127.7
Q ss_pred CChhhHHHHhcC---CCCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHhhcCCCCCCCCccEEEEEee
Q 006697 456 PPIGVFFAAVAP---HLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIR 532 (635)
Q Consensus 456 ~p~~~ll~~~~p---~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~l~~g~~~~~~~~v~i~~~ 532 (635)
..+||++.+.+| ....|+|||+|++.. .+.++|+|+++. .|.+|+||+++++| +.|.|.+|
T Consensus 42 ~~pGq~v~l~~~~~g~~~~R~ysi~s~~~~-~~~~~l~vk~~~---------~G~~S~~l~~l~~G------d~v~v~gP 105 (243)
T 2eix_A 42 LPIGQHMSVKATVDGKEIYRPYTPVSSDDE-KGYFDLIIKVYE---------KGQMSQYIDHLNPG------DFLQVRGP 105 (243)
T ss_dssp CCTTCEEEEEEEETTEEEEEEECCCSCTTC-CSEEEEEEECCT---------TCHHHHHHHTCCTT------CEEEEEEE
T ss_pred cCCceEEEEEEeeCCCEEEeeeeecCCCCC-CCEEEEEEEEcC---------CCCcchHhhcCCCC------CEEEEECC
Confidence 468898887654 236799999999864 578999998742 59999999999999 89999999
Q ss_pred CCCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccEEEEE
Q 006697 533 PSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILA 612 (635)
Q Consensus 533 ~g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~l~~a 612 (635)
.|+|.++.+..+++||||+|||||||++|++++... .....+++|+||+|+.+ |++|.+||+++++...+++++.+
T Consensus 106 ~G~f~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~---~~~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~ 181 (243)
T 2eix_A 106 KGQFDYKPNMVKEMGMIAGGTGITPMLQVARAIIKN---PKEKTIINLIFANVNED-DILLRTELDDMAKKYSNFKVYYV 181 (243)
T ss_dssp ECSCCCCTTSSSEEEEEEEGGGHHHHHHHHHHHHTC---TTCCCEEEEEEEEEEGG-GCTTHHHHHHHHHHCTTEEEEEE
T ss_pred eEEEEeCCCCCcEEEEEecCccHHHHHHHHHHHHhC---CCCCcEEEEEEEcCCHH-HhhHHHHHHHHHHHCCCeEEEEE
Confidence 999999876668999999999999999999998741 11357899999999998 99999999999988778899999
Q ss_pred EecCCC----CcccchhHH
Q 006697 613 FSREGS----QKEYVQHKM 627 (635)
Q Consensus 613 ~SR~~~----~k~yVQd~l 627 (635)
+||+.+ .++||++.+
T Consensus 182 ~s~~~~~~~g~~g~v~~~~ 200 (243)
T 2eix_A 182 LNNPPAGWTGGVGFVSADM 200 (243)
T ss_dssp EEECCTTCCSEESSCCHHH
T ss_pred eCCCCccccCcCCccCHHH
Confidence 998643 468998643
No 30
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=99.85 E-value=1.6e-21 Score=187.62 Aligned_cols=143 Identities=21% Similarity=0.371 Sum_probs=121.5
Q ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHHHH
Q 006697 84 TKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYK 163 (635)
Q Consensus 84 ~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~ 163 (635)
|+++|+|+|+||||+++|+.|++.+... .+++.++++.+..+ +.+++++||++|||+.|++|+++..|++
T Consensus 1 Mki~IvY~S~tGnT~~iA~~Ia~~l~~~----~v~i~~~~~~~~~~------l~~~d~ii~g~pt~~~G~~p~~~~~f~~ 70 (175)
T 1ag9_A 1 AITGIFFGSDTGNTENIAKMIQKQLGKD----VADVHDIAKSSKED------LEAYDILLLGIPTWYYGEAQCDWDDFFP 70 (175)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHCTT----TEEEEEGGGCCHHH------HHTCSEEEEECCEETTTEECHHHHHHHH
T ss_pred CEEEEEEECCCchHHHHHHHHHHHhccC----ceEEEEcccCChhH------hhhCCEEEEEEeecCCCcChHHHHHHHh
Confidence 5799999999999999999999999753 37788888766555 7889999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCceEEEEEecCcc-h-hHHHHHHHHHHHHHHHCCCEEeecc--------------------ee-ecC
Q 006697 164 WFTEGNDRGPWLQQLKFGVFGLGNRQ-Y-EHFNKIGIVLDEELCKQGGARLVPL--------------------GL-GDD 220 (635)
Q Consensus 164 ~L~~~~~~~~~l~~~~~aVFGlGds~-Y-~~f~~~~k~ld~~L~~lGa~~v~~~--------------------g~-gD~ 220 (635)
+|.... ++++++++||+||+. | ++||.+.+.+++.|++.|++++... |+ .|.
T Consensus 71 ~l~~~~-----l~gk~vavfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v~~~~~~g~~~~~s~~~~~~~~~~gl~~~~ 145 (175)
T 1ag9_A 71 TLEEID-----FNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDE 145 (175)
T ss_dssp HHTTCC-----CTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHTTTTCEECCCEECTTCCCSCCSCEEETTEESSEEECT
T ss_pred hhhhcc-----cCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEEecCCCcccccchheeeCCeEEeeecCC
Confidence 998643 889999999999986 8 7999999999999999999988642 21 232
Q ss_pred CC---CchHHHHHHHHHHHHHHHH
Q 006697 221 DQ---CIEDDFTAWRELVWPELDQ 241 (635)
Q Consensus 221 ~~---~~e~~f~~W~~~l~~~L~~ 241 (635)
++ ..++.+.+|.++++++|..
T Consensus 146 ~~~~~~~~~~i~~w~~~i~~~~~~ 169 (175)
T 1ag9_A 146 DRQPELTAERVEKWVKQISEELHL 169 (175)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTH
T ss_pred CCcccccHHHHHHHHHHHHHHhhh
Confidence 22 3578899999999998865
No 31
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=99.84 E-value=1.3e-20 Score=179.72 Aligned_cols=142 Identities=25% Similarity=0.429 Sum_probs=121.8
Q ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHHHH
Q 006697 84 TKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYK 163 (635)
Q Consensus 84 ~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~ 163 (635)
|+++|+|+|+||||+++|+.|++.+... .++++++++++.++ +.+++.+||++||||.|.+|+++..|++
T Consensus 2 mkilIiY~S~tGnT~~vA~~ia~~l~~~----~v~~~~~~~~~~~~------l~~~d~ii~g~p~y~~g~~p~~~~~fl~ 71 (169)
T 1obo_A 2 KKIGLFYGTQTGKTESVAEIIRDEFGND----VVTLHDVSQAEVTD------LNDYQYLIIGCPTLNIGELQSDWEGLYS 71 (169)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHCTT----TEEEEETTTCCGGG------GGGCSEEEEEEEEETTTEECHHHHHHHT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHhCcC----CcEEEEcccCCHHH------HhhCCEEEEEEeeCCCCcCCHHHHHHHH
Confidence 6899999999999999999999999753 47889999887766 8899999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCceEEEEEecCcc-hh-HHHHHHHHHHHHHHHCCCEEeecc-------------------ee-ecCC
Q 006697 164 WFTEGNDRGPWLQQLKFGVFGLGNRQ-YE-HFNKIGIVLDEELCKQGGARLVPL-------------------GL-GDDD 221 (635)
Q Consensus 164 ~L~~~~~~~~~l~~~~~aVFGlGds~-Y~-~f~~~~k~ld~~L~~lGa~~v~~~-------------------g~-gD~~ 221 (635)
+|.... ++++++++||+|++. |+ |||.+.+.+++.|+++|++.+... ++ .+..
T Consensus 72 ~l~~~~-----l~~k~~~~f~tg~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~g~~~~~s~~~~~~~~~~l~~~~~ 146 (169)
T 1obo_A 72 ELDDVD-----FNGKLVAYFGTGDQIGYADNFQDAIGILEEKISQRGGKTVGYWSTDGYDFNDSKALRNGKFVGLALDED 146 (169)
T ss_dssp TGGGCC-----CTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCCEECTTCCCSCCTTEETTEESSEEECTT
T ss_pred HhhhcC-----cCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEeecCCCcccccchhhcCCceeeEEeeCC
Confidence 997643 889999999999984 96 899999999999999999988652 22 1221
Q ss_pred ---CCchHHHHHHHHHHHHHHH
Q 006697 222 ---QCIEDDFTAWRELVWPELD 240 (635)
Q Consensus 222 ---~~~e~~f~~W~~~l~~~L~ 240 (635)
+..++.+.+|.++++++|.
T Consensus 147 ~~~~~~~~~~~~w~~~~~~~l~ 168 (169)
T 1obo_A 147 NQSDLTDDRIKSWVAQLKSEFG 168 (169)
T ss_dssp TCGGGHHHHHHHHHHHHHHHHT
T ss_pred CccccCHHHHHHHHHHHHHHhc
Confidence 2467889999999998873
No 32
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.84 E-value=2.3e-21 Score=196.10 Aligned_cols=153 Identities=18% Similarity=0.160 Sum_probs=128.5
Q ss_pred CCChhhHHHHhcCC---CCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHhhcCCCCCCCCccEEEEE-
Q 006697 455 TPPIGVFFAAVAPH---LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIF- 530 (635)
Q Consensus 455 ~~p~~~ll~~~~p~---l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~l~~g~~~~~~~~v~i~- 530 (635)
...+||++.+.+|. ..+|+|||+|+|.. +.++|+|+.++ .|.+|+||+++++| +.|.|.
T Consensus 30 ~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~l~~~v~~~~---------~G~~s~~l~~l~~G------d~v~v~~ 92 (248)
T 1fdr_A 30 PFTAGQFTKLGLEIDGERVQRAYSYVNSPDN--PDLEFYLVTVP---------DGKLSPRLAALKPG------DEVQVVS 92 (248)
T ss_dssp CCCTTCEEEEEECC---CEEEEEECCSCTTC--SSEEEEEECCT---------TCSSHHHHHTCCTT------CEEEEES
T ss_pred CcCCCCcEEEEccCCCCeeeeeecccCCCCC--CcEEEEEEEeC---------CCchhhHHHhCCCc------CEEEEec
Confidence 35789999887663 46799999999863 78999998642 59999999999999 899999
Q ss_pred eeCCCCcCCCCC-CCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcC-CccE
Q 006697 531 IRPSNFKLPANP-SVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEG-VISE 608 (635)
Q Consensus 531 ~~~g~F~lp~~~-~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g-~~~~ 608 (635)
+|.|.|.++.+. .+++||||+|||||||+++++++.. .+ ...+++|+||+|+.+ |++|.+||++++++. .+++
T Consensus 93 gP~G~f~l~~~~~~~~~vliagG~GitP~~~~l~~l~~---~~-~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~ 167 (248)
T 1fdr_A 93 EAAGFFVLDEVPHCETLWMLATGTAIGPYLSILRLGKD---LD-RFKNLVLVHAARYAA-DLSYLPLMQELEKRYEGKLR 167 (248)
T ss_dssp SCBCCCSGGGSCCCSEEEEEEEGGGGHHHHHHHHHCCS---CT-TCSEEEEEEEESSGG-GCTTHHHHHHHHHHTTTSEE
T ss_pred CCcceeEcCCCCCCceEEEEEecccHHHHHHHHHHHHh---hC-CCCcEEEEEEcCCHH-HhhHHHHHHHHHHhCcCcEE
Confidence 999999987653 6899999999999999999998653 22 347899999999988 999999999998764 4678
Q ss_pred EEEEEecCCC---CcccchhHHhc
Q 006697 609 LILAFSREGS---QKEYVQHKMMD 629 (635)
Q Consensus 609 l~~a~SR~~~---~k~yVQd~l~~ 629 (635)
++.++||++. .++||++.+.+
T Consensus 168 ~~~~~s~~~~~~~~~g~v~~~l~~ 191 (248)
T 1fdr_A 168 IQTVVSRETAAGSLTGRIPALIES 191 (248)
T ss_dssp EEEEESSSCCTTEEESCHHHHHHT
T ss_pred EEEEEecCCCCCCcceeeChHHHh
Confidence 9999999865 36899998765
No 33
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.84 E-value=2.4e-21 Score=199.05 Aligned_cols=161 Identities=17% Similarity=0.201 Sum_probs=127.6
Q ss_pred CChhhHHHHhcC---CCCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHhhcCCCCCCCCccEEEEEee
Q 006697 456 PPIGVFFAAVAP---HLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIR 532 (635)
Q Consensus 456 ~p~~~ll~~~~p---~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~l~~g~~~~~~~~v~i~~~ 532 (635)
..+||++.+.++ ...+|+|||+|+|.. ++.++|+|+++.+.+..+....|.+|+||+++++| +.|.|.+|
T Consensus 47 ~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~-~~~~~l~vk~~~~~~~~~~~~~G~~S~~L~~l~~G------d~v~v~gP 119 (275)
T 1umk_A 47 LPVGQHIYLSARIDGNLVVRPYTPISSDDD-KGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIG------DTIEFRGP 119 (275)
T ss_dssp CCTTCEEEEEEEETTEEEEEEECCSSCTTC-CSEEEEEEECCCSSSBTTBTTCCHHHHHHHHCCTT------CEEEEEEE
T ss_pred CCCCcEEEEEEeeCCcEEEeccccCCccCC-CCeEEEEEEEeccCcccccCCCChhHHHHhcCCCC------CEEEEEcC
Confidence 367888877633 246899999999864 68899999986443322223469999999999999 89999999
Q ss_pred CCCCcC--------CCC--------CCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHH
Q 006697 533 PSNFKL--------PAN--------PSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDE 596 (635)
Q Consensus 533 ~g~F~l--------p~~--------~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~de 596 (635)
.|.|.+ +.+ ..+|+||||+|||||||++|++++.. ++....+++|+||+|+.+ |++|.+|
T Consensus 120 ~G~~~~~~~~~f~l~~~~~~~~~~~~~~~~vliagGtGIaP~~~~l~~l~~---~~~~~~~v~l~~~~r~~~-d~~~~~e 195 (275)
T 1umk_A 120 SGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMK---DPDDHTVCHLLFANQTEK-DILLRPE 195 (275)
T ss_dssp ECSEEEEETTEEEECSSTTSCCEEEECSEEEEEEEGGGHHHHHHHHHHHHT---CTTCCCEEEEEEEESSGG-GCTTHHH
T ss_pred ccceEecCCccccccccccccccccCCceEEEEecCccHhHHHHHHHHHHh---CCCCCcEEEEEEEcCCHH-HhhHHHH
Confidence 998754 321 35799999999999999999999874 212457899999999988 9999999
Q ss_pred HHHHHHcCC-ccEEEEEEecCCC----CcccchhHH
Q 006697 597 LNNFEEEGV-ISELILAFSREGS----QKEYVQHKM 627 (635)
Q Consensus 597 l~~~~~~g~-~~~l~~a~SR~~~----~k~yVQd~l 627 (635)
|+++++... .++++.++||++. .++||++.+
T Consensus 196 l~~l~~~~~~~~~~~~~~s~~~~~~~~~~g~v~~~~ 231 (275)
T 1umk_A 196 LEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEM 231 (275)
T ss_dssp HHHHHHHCTTTEEEEEEESSCCSSCSSEESSCCHHH
T ss_pred HHHHHHhCcCcEEEEEEEcCCCccccCccCccCHHH
Confidence 999988754 5789999998754 368999854
No 34
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.84 E-value=4.7e-21 Score=203.04 Aligned_cols=150 Identities=24% Similarity=0.303 Sum_probs=130.1
Q ss_pred CChhhHHHHhcCC-CCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHh-hcCCCCCCCCccEEEEEeeC
Q 006697 456 PPIGVFFAAVAPH-LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMK-NAIPLEGNGDCSWAPIFIRP 533 (635)
Q Consensus 456 ~p~~~ll~~~~p~-l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~-~l~~g~~~~~~~~v~i~~~~ 533 (635)
..+|||+.+.+|. ..+|+|||+|+|. .+.++|+|+++. .|.+|+||+ ++++| +.|.|.+|.
T Consensus 139 ~~pGQ~v~l~~~~~~~~R~ySi~s~~~--~~~l~~~vk~~~---------~G~~S~~L~~~l~~G------d~v~v~gP~ 201 (338)
T 1krh_A 139 FLAGQYVNVTLPGTTETRSYSFSSQPG--NRLTGFVVRNVP---------QGKMSEYLSVQAKAG------DKMSFTGPF 201 (338)
T ss_dssp CCTTCEEEEECTTSSCEEEEECCSCTT--CSEEEEEEECCT---------TCHHHHHHHTTCCTT------CEEEEEEEE
T ss_pred cCCCCeEEEEcCCCCccccccccCCCC--CCeEEEEEEEcC---------CCCchhhHhhccCCC------CEEEEECCc
Confidence 4689999887676 5789999999986 588999998743 599999995 79999 899999999
Q ss_pred CCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccEEEEEE
Q 006697 534 SNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAF 613 (635)
Q Consensus 534 g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~l~~a~ 613 (635)
|+|.++.+ .+|+||||+|||||||++|++++.. ++ ...+++||||+|+.+ |++|.+||+++++...++++++++
T Consensus 202 G~f~~~~~-~~~~vliagGtGiaP~~s~l~~l~~---~~-~~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~~~ 275 (338)
T 1krh_A 202 GSFYLRDV-KRPVLMLAGGTGIAPFLSMLQVLEQ---KG-SEHPVRLVFGVTQDC-DLVALEQLDALQQKLPWFEYRTVV 275 (338)
T ss_dssp CSCSCCCC-SSCEEEEEEGGGHHHHHHHHHHHHH---HC-CSSCEEEEEEESSGG-GCCCHHHHHHHHHHCTTEEEEEEE
T ss_pred cceEeCCC-CceEEEEEccccHhHHHHHHHHHHH---cC-CCCeEEEEEEeCCHH-HhhhHHHHHHHHHhCCCeEEEEEE
Confidence 99998865 4899999999999999999999876 22 357899999999998 999999999999887788999999
Q ss_pred ecCCC---CcccchhHHh
Q 006697 614 SREGS---QKEYVQHKMM 628 (635)
Q Consensus 614 SR~~~---~k~yVQd~l~ 628 (635)
||++. .++||++.+.
T Consensus 276 s~~~~~~~~~g~v~~~l~ 293 (338)
T 1krh_A 276 AHAESQHERKGYVTGHIE 293 (338)
T ss_dssp TTCCSSSSEESCSGGGCC
T ss_pred ecCCCCCCccCccCHHHH
Confidence 99765 4689998876
No 35
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=99.83 E-value=9.7e-21 Score=180.51 Aligned_cols=142 Identities=25% Similarity=0.420 Sum_probs=121.2
Q ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHHHH
Q 006697 84 TKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYK 163 (635)
Q Consensus 84 ~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~ 163 (635)
|+++|+|+|+||||+++|+.|++.+... +.++++++.+++.++ +.+++.+||++|||+.|.+|++++.|++
T Consensus 1 ~kilIvY~S~tGnT~~vA~~ia~~l~~~---~~v~~~~~~~~~~~~------l~~~d~ii~g~pty~~g~~p~~~~~f~~ 71 (169)
T 1czn_A 1 AKIGLFYGTQTGVTQTIAESIQQEFGGE---SIVDLNDIANADASD------LNAYDYLIIGCPTWNVGELQSDWEGIYD 71 (169)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHTST---TTEEEEEGGGCCGGG------GGGCSEEEEECCEETTTEECHHHHHHGG
T ss_pred CeEEEEEECCCcHHHHHHHHHHHHhCcc---cceEEEEhhhCCHhH------HhhCCEEEEEecccCCCcCCHHHHHHHH
Confidence 5799999999999999999999999642 358899998887666 8899999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCceEEEEEecCcc-hh-HHHHHHHHHHHHHHHCCCEEeecc-------------------ee-ecCC
Q 006697 164 WFTEGNDRGPWLQQLKFGVFGLGNRQ-YE-HFNKIGIVLDEELCKQGGARLVPL-------------------GL-GDDD 221 (635)
Q Consensus 164 ~L~~~~~~~~~l~~~~~aVFGlGds~-Y~-~f~~~~k~ld~~L~~lGa~~v~~~-------------------g~-gD~~ 221 (635)
+|.... ++++++++||+|++. |+ +||.+.+.+++.|+++|++.+... ++ .|.+
T Consensus 72 ~l~~~~-----l~gk~~~~f~t~~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~g~~~~~s~~~~~~~~~gl~~~~~ 146 (169)
T 1czn_A 72 DLDSVN-----FQGKKVAYFGAGDQVGYSDNFQDAMGILEEKISSLGSQTVGYWPIEGYDFNESKAVRNNQFVGLAIDED 146 (169)
T ss_dssp GGGGSC-----CTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCCEECTTCCCSCCTTEETTEESSEEECTT
T ss_pred Hhhhhc-----cCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEEEEecCCCcceecchheeCCeeeeeeecCC
Confidence 997543 889999999999995 95 899999999999999999988631 22 2322
Q ss_pred ---CCchHHHHHHHHHHHHHH
Q 006697 222 ---QCIEDDFTAWRELVWPEL 239 (635)
Q Consensus 222 ---~~~e~~f~~W~~~l~~~L 239 (635)
+..++.+.+|.+++++.|
T Consensus 147 ~~~~~~~~~~~~w~~~~~~~~ 167 (169)
T 1czn_A 147 NQPDLTKNRIKTWVSQLKSEF 167 (169)
T ss_dssp TCGGGHHHHHHHHHHHHHHHT
T ss_pred CccccCHHHHHHHHHHHHHHh
Confidence 246789999999998876
No 36
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.82 E-value=1.9e-20 Score=202.55 Aligned_cols=141 Identities=15% Similarity=0.241 Sum_probs=122.2
Q ss_pred CChhhHHHHhcCC-----CCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHhh-cCCCCCCCCccEEEE
Q 006697 456 PPIGVFFAAVAPH-----LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKN-AIPLEGNGDCSWAPI 529 (635)
Q Consensus 456 ~p~~~ll~~~~p~-----l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~-l~~g~~~~~~~~v~i 529 (635)
..+||++.+.+|. .++|+|||+|+|. .+.++|+|+.++ .|.+|+||++ +++| +.|.|
T Consensus 183 ~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~~---------~G~~S~~L~~~l~~G------d~v~v 245 (396)
T 1gvh_A 183 YRPGQYLGVWLKPEGFPHQEIRQYSLTRKPD--GKGYRIAVKREE---------GGQVSNWLHNHANVG------DVVKL 245 (396)
T ss_dssp CCTTCEEEEEECCTTCSSCEEEEEECCSCCC--SSCEEEEEECCT---------TCHHHHHHHHTCCTT------CEEEE
T ss_pred CCCCCeEEEEecCCCCccceeecceeccCCC--CCeEEEEEEEcC---------CCcchHHHHhcCCCC------CEEEE
Confidence 4689988887553 3589999999986 478999998742 5999999997 9999 89999
Q ss_pred EeeCCCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccEE
Q 006697 530 FIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISEL 609 (635)
Q Consensus 530 ~~~~g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~l 609 (635)
.+|.|.|.++.+..+|+||||+|||||||++|++++... + ...+++|+||+|+.+ |++|++||+++++.+.++++
T Consensus 246 ~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~---~-~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~ 320 (396)
T 1gvh_A 246 VAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKA---G-HTAQVNWFHAAENGD-VHAFADEVKELGQSLPRFTA 320 (396)
T ss_dssp EEEECSCCCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHH---T-CCSCEEEEEEESCTT-TCCSHHHHHHHHHTSSSEEE
T ss_pred EcCCcceECCCCCCCCEEEEecchhHhHHHHHHHHHHhc---C-CCCcEEEEEEeCCHH-HhhhHHHHHHHHHHCCCeEE
Confidence 999999999866678999999999999999999998762 2 457899999999999 99999999999988888899
Q ss_pred EEEEecCCC
Q 006697 610 ILAFSREGS 618 (635)
Q Consensus 610 ~~a~SR~~~ 618 (635)
++++||++.
T Consensus 321 ~~~~s~~~~ 329 (396)
T 1gvh_A 321 HTWYRQPSE 329 (396)
T ss_dssp EEEESSCCH
T ss_pred EEEECCCCc
Confidence 999998753
No 37
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.82 E-value=1.7e-20 Score=188.93 Aligned_cols=153 Identities=13% Similarity=0.238 Sum_probs=124.5
Q ss_pred CCChhhHHHHhcCCC-----CccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHh-hcCCCCCCCCccEEE
Q 006697 455 TPPIGVFFAAVAPHL-----QPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMK-NAIPLEGNGDCSWAP 528 (635)
Q Consensus 455 ~~p~~~ll~~~~p~l-----~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~-~l~~g~~~~~~~~v~ 528 (635)
...+||++.+.+|.- ++|+|||+|+|. .+.++|+|+.+.. ++...|.+|+||+ ++++| +.|.
T Consensus 33 ~~~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~--~~~~~i~vk~~~~----~~~~~G~~S~~l~~~l~~G------~~v~ 100 (243)
T 4eh1_A 33 DYQPGQYIGIEVTPEGSDYREIRQYSLSHASN--GREYRISVKREGV----GSDNPGLVSHYLHNNVKVG------DSVK 100 (243)
T ss_dssp CCCTTCEEEEEECCSSCSSCEEEEEEBCSCCC--SSCEEEEEECTTT----TSSSCCHHHHHHHHHCCTT------CEEE
T ss_pred CcCCCCEEEEEEecCCCccccceeeEeccCCC--CCeEEEEEEEeec----CCCCCCeehhHHHhcCCCC------CEEE
Confidence 346899998876632 469999999985 3679999887421 1223699999997 59999 8999
Q ss_pred EEeeCCCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccE
Q 006697 529 IFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISE 608 (635)
Q Consensus 529 i~~~~g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~ 608 (635)
|.+|.|.|.++ +..+|+||||+|||||||++|++++.. ++ ... ++|+||+|+.+ |++|.+||+++++.+ .++
T Consensus 101 v~gP~G~~~~~-~~~~~~vliagGtGitp~~~~l~~l~~---~~-~~~-v~l~~~~r~~~-~~~~~~el~~l~~~~-~~~ 172 (243)
T 4eh1_A 101 LYAPAGDFFYV-ERERPVVLISAGVGATPMQAILHTLAK---QN-KSG-VTYLYACNSAK-EHTFAQETAQLIAQQ-GWM 172 (243)
T ss_dssp EEEEECSCCCC-CCSSCEEEEEEGGGHHHHHHHHHHHHH---TT-CCS-EEEEEEESSGG-GCTTHHHHHHHHHHH-TCE
T ss_pred EEccCcccCcC-CCCCCEEEEEccccHHHHHHHHHHHHH---cC-CCe-EEEEEEeCChh-hhhHHHHHHHHHHhC-CeE
Confidence 99999999988 567899999999999999999999876 22 223 99999999998 999999999999887 778
Q ss_pred EEEEEecCCC---CcccchhHH
Q 006697 609 LILAFSREGS---QKEYVQHKM 627 (635)
Q Consensus 609 l~~a~SR~~~---~k~yVQd~l 627 (635)
+++++|++.. .+++|++.+
T Consensus 173 ~~~~~s~~~~~~~~~g~~~~~~ 194 (243)
T 4eh1_A 173 QQVWYRDESADDVLQGEMQLAE 194 (243)
T ss_dssp EEEEESSCCCTTCEESSCCCTT
T ss_pred EEEEEccCCCcccccCCccHHH
Confidence 9999998665 356666544
No 38
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.81 E-value=1.7e-20 Score=192.17 Aligned_cols=162 Identities=15% Similarity=0.222 Sum_probs=125.7
Q ss_pred CChhhHHHHhcC---CCCccccccCCCCCCCCCeEEEEEEEEEecCCCCC-cccCccchHHhhcCCCCCCCCccEEEEEe
Q 006697 456 PPIGVFFAAVAP---HLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGR-IHKGVCSTWMKNAIPLEGNGDCSWAPIFI 531 (635)
Q Consensus 456 ~p~~~ll~~~~p---~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~-~~~G~~S~~L~~l~~g~~~~~~~~v~i~~ 531 (635)
..+||++.+.++ ...+|+|||+|+|.. ++.++|+|+++.. ...++ ...|.+|+||.++++| +.|.|.+
T Consensus 43 ~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~-~~~~~l~vk~~~~-~~~~~~~~~G~~s~~l~~l~~G------d~v~v~g 114 (270)
T 2cnd_A 43 LPIGKHIFVCATIEGKLCMRAYTPTSMVDE-IGHFDLLVKVYFK-NEHPKFPNGGLMTQYLDSLPVG------SYIDVKG 114 (270)
T ss_dssp CCTTCEEEEEEEETTEEEEEEECCCSCTTC-CSEEEEEEECCCS-SCBTTBTTCCHHHHHHHHCCTT------CEEEEEE
T ss_pred CCCCCEEEEEeeeCCcEEEEeeccCCCccC-CCEEEEEEEEecc-CcccccCCCCchhhHHhcCCCC------CEEEEEC
Confidence 468888877533 246899999999864 5789999997521 11111 1259999999999999 8999999
Q ss_pred eCCC--------CcCCC--CCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHH
Q 006697 532 RPSN--------FKLPA--NPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFE 601 (635)
Q Consensus 532 ~~g~--------F~lp~--~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~ 601 (635)
|.|. |.++. +..+|+||||+|||||||++|++++.... .....+++||||+|+++ |++|.+||++++
T Consensus 115 P~G~~~~~~~g~f~l~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~--~~~~~~v~l~~~~r~~~-d~~~~~el~~l~ 191 (270)
T 2cnd_A 115 PLGHVEYTGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQ--PEDHTEMHLVYANRTED-DILLRDELDRWA 191 (270)
T ss_dssp EECSEECCSSSCEEETTEEECCSEEEEEEEGGGHHHHHHHHHHHHHTT--TTCCCEEEEEEEESCGG-GCTTHHHHHHHH
T ss_pred CcccceeccccceeccCCcccCCEEEEEeccccHHHHHHHHHHHHhcC--CCCCcEEEEEEEcCCHH-HcchHHHHHHHH
Confidence 9996 66664 24679999999999999999999987521 11357899999999999 999999999998
Q ss_pred HcCC-ccEEEEEEecCC---C----CcccchhHHh
Q 006697 602 EEGV-ISELILAFSREG---S----QKEYVQHKMM 628 (635)
Q Consensus 602 ~~g~-~~~l~~a~SR~~---~----~k~yVQd~l~ 628 (635)
+... .++++.++||+. . .++||++.+.
T Consensus 192 ~~~~~~~~~~~~~s~~~~~~~~~~~~~g~v~~~~l 226 (270)
T 2cnd_A 192 AEYPDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVL 226 (270)
T ss_dssp HHCTTTEEEEEEESCCSCGGGCCCSEESSCCHHHH
T ss_pred HHCcCcEEEEEEECCCCCCCCCcccccccCCHHHH
Confidence 8754 578889998832 1 3689998753
No 39
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.81 E-value=1.3e-20 Score=193.72 Aligned_cols=152 Identities=17% Similarity=0.193 Sum_probs=126.6
Q ss_pred CChhhHHHHhcCC----CCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHhhcCCCCCCCCccEEEEE-
Q 006697 456 PPIGVFFAAVAPH----LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIF- 530 (635)
Q Consensus 456 ~p~~~ll~~~~p~----l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~l~~g~~~~~~~~v~i~- 530 (635)
..+||++.+.+|. ..+|+|||+|+|.. +.++|+|+.+. .|.+|+||+++++| +.|.|.
T Consensus 44 ~~pGQ~v~l~~~~~~g~~~~R~ySi~s~~~~--~~~~l~v~~~~---------~G~~s~~l~~l~~G------d~v~v~~ 106 (272)
T 2bgi_A 44 FRSGEFVMIGLLDDNGKPIMRAYSIASPAWD--EELEFYSIKVP---------DGPLTSRLQHIKVG------EQIILRP 106 (272)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEEECCSCTTC--SEEEEEEECCT---------TCTTHHHHTTCCTT------CEEEEEE
T ss_pred cCCCCEEEEEeccCCCCeeeeeeeeccCCCC--CeEEEEEEEcc---------CCCchhHHHhCCCC------CEEEEee
Confidence 4689998887662 36799999999863 78999988742 59999999999999 899999
Q ss_pred eeCCCCcCCCCC-CCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHH-HHHH-----c
Q 006697 531 IRPSNFKLPANP-SVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELN-NFEE-----E 603 (635)
Q Consensus 531 ~~~g~F~lp~~~-~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~-~~~~-----~ 603 (635)
+|.|.|.++... .+++||||+|||||||++|++++.. .+ ...+++|+||+|+.+ |++|.+||+ ++++ .
T Consensus 107 gP~G~f~~~~~~~~~~~vliagG~GiaP~~~~l~~l~~---~~-~~~~v~l~~~~r~~~-~~~~~~el~~~l~~~~~~~~ 181 (272)
T 2bgi_A 107 KPVGTLVIDALLPGKRLWFLATGTGIAPFASLMREPEA---YE-KFDEVIMMHACRTVA-ELEYGRQLVEALQEDPLIGE 181 (272)
T ss_dssp EEECSCCGGGBCCCSEEEEEEEGGGGHHHHHHTTCGGG---GT-SCSEEEEEEEESSSG-GGHHHHHHHHHHHHCTTTTT
T ss_pred CCCCcccccccccCCeEEEEeecccHHHHHHHHHHHHh---cC-CCCcEEEEEEeCCHH-HhhHHHHHHHHHHhcchhhc
Confidence 899999987543 5799999999999999999998654 21 347899999999998 999999999 9887 3
Q ss_pred --CCccEEEEEEecCCC-CcccchhHHhc
Q 006697 604 --GVISELILAFSREGS-QKEYVQHKMMD 629 (635)
Q Consensus 604 --g~~~~l~~a~SR~~~-~k~yVQd~l~~ 629 (635)
+..++++.++||+.. .++||++.+.+
T Consensus 182 ~~~~~~~~~~~~s~~~~~~~g~v~~~l~~ 210 (272)
T 2bgi_A 182 LVEGKLKYYPTTTREEFHHMGRITDNLAS 210 (272)
T ss_dssp TSTTTEEEEEEESSSCCSSBCCHHHHHHS
T ss_pred ccCCcEEEEEEecCCccccCceechHHHh
Confidence 356789999999854 57899998764
No 40
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.81 E-value=1.4e-20 Score=192.28 Aligned_cols=146 Identities=19% Similarity=0.222 Sum_probs=120.7
Q ss_pred CChhhHHHHhcCC---CCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHhhcCCCCCCCCccEEEEEee
Q 006697 456 PPIGVFFAAVAPH---LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIR 532 (635)
Q Consensus 456 ~p~~~ll~~~~p~---l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~l~~g~~~~~~~~v~i~~~ 532 (635)
..+||++.+.+|. ..+|+|||+|+|.. .+.++|+|+.++ .|.+|+||+++++| +.|.|.+|
T Consensus 34 ~~pGQ~v~l~~~~~~~~~~R~ySi~s~~~~-~~~l~~~vk~~~---------~G~~S~~l~~l~~G------d~v~v~gP 97 (262)
T 1ep3_B 34 DLPGQFLHLAVPNGAMLLRRPISISSWDKR-AKTCTILYRIGD---------ETTGTYKLSKLESG------AKVDVMGP 97 (262)
T ss_dssp CSTTCEEEECCSCTTCCSCEEEECCEEETT-TTEEEEEEECCC---------TTSHHHHHHTCCTT------CEEEEEEE
T ss_pred CCCCceEEEEcCCCCceeeEEEEeeeecCC-CCEEEEEEEEec---------CCchHHHHhcCCCC------CEEEEEcc
Confidence 3688998887564 68999999999864 578999998743 58899999999999 89999999
Q ss_pred CCC-CcCCCC-CCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccEEE
Q 006697 533 PSN-FKLPAN-PSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELI 610 (635)
Q Consensus 533 ~g~-F~lp~~-~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~l~ 610 (635)
.|+ |.++.+ ..+|+||||+|||||||++|++++... ..+++||||+|+++ |++|.+||++++.. +++
T Consensus 98 ~G~~f~l~~~~~~~~~lliagGtGitP~~s~l~~l~~~------~~~v~l~~~~r~~~-~~~~~~el~~l~~~----~~~ 166 (262)
T 1ep3_B 98 LGNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKT------GCQMTILLGFASEN-VKILENEFSNLKNV----TLK 166 (262)
T ss_dssp ESBCCCCTTCCTTSEEEEEEEGGGSHHHHHHHHHHHHH------TCEEEEEEEESSGG-GCCCHHHHHTSTTE----EEE
T ss_pred cCCCccCCCccCCCeEEEEECcCcHHHHHHHHHHHHHc------CCeEEEEEEcCCHH-HhhhHHHHhhhccC----cEE
Confidence 997 999865 468999999999999999999998762 26899999999999 99999999886543 455
Q ss_pred EEEecCCC--CcccchhHHhc
Q 006697 611 LAFSREGS--QKEYVQHKMMD 629 (635)
Q Consensus 611 ~a~SR~~~--~k~yVQd~l~~ 629 (635)
++ ++++. .++||++.|.+
T Consensus 167 ~~-~~~~~~~~~g~v~~~l~~ 186 (262)
T 1ep3_B 167 IA-TDDGSYGTKGHVGMLMNE 186 (262)
T ss_dssp EE-ETTCSSSEESCHHHHHHH
T ss_pred EE-ECCCCCcceeehHHHHHh
Confidence 44 45543 46899998765
No 41
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=99.80 E-value=3e-19 Score=164.44 Aligned_cols=118 Identities=17% Similarity=0.214 Sum_probs=104.6
Q ss_pred EEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCCh-hHHHHHHH
Q 006697 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTD-NAARFYKW 164 (635)
Q Consensus 86 v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~-na~~F~~~ 164 (635)
|+|+|+|+||||+++|+.|++.+.+. |++++++++.+++.++ +.+++.+||++||||.|.+|+ ++..|+++
T Consensus 1 i~I~Y~S~tGnT~~iA~~ia~~l~~~--g~~v~~~~~~~~~~~~------l~~~d~iiig~pty~~g~~p~~~~~~fl~~ 72 (138)
T 5nul_A 1 MKIVYWSGTGNTEKMAELIAKGIIES--GKDVNTINVSDVNIDE------LLNEDILILGCSAMTDEVLEESEFEPFIEE 72 (138)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHHT--TCCCEEEEGGGCCHHH------HTTCSEEEEEECCBTTTBCCTTTHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHHHHC--CCeEEEEEhhhCCHHH------HhhCCEEEEEcCccCCCCCChHHHHHHHHH
Confidence 58999999999999999999999988 8899999999887766 889999999999999999887 89999999
Q ss_pred HhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecC
Q 006697 165 FTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDD 220 (635)
Q Consensus 165 L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~ 220 (635)
+... ++++++++||+++..| |.+.+.+++.|+++|++++.+...++.
T Consensus 73 l~~~------l~~k~~~~f~t~g~~~---~~a~~~l~~~l~~~G~~~v~~~~~~~~ 119 (138)
T 5nul_A 73 ISTK------ISGKKVALFGSYGWGD---GKWMRDFEERMNGYGCVVVETPLIVQN 119 (138)
T ss_dssp HGGG------CTTCEEEEEEEESSSC---SHHHHHHHHHHHHTTCEECSCCEEEES
T ss_pred HHhh------cCCCEEEEEEecCCCC---ChHHHHHHHHHHHCCCEEECCceEEec
Confidence 9763 7899999999765443 788999999999999999977666654
No 42
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.79 E-value=1.8e-19 Score=195.26 Aligned_cols=151 Identities=13% Similarity=0.253 Sum_probs=124.2
Q ss_pred CChhhHHHHhc--C--C---CCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHh-hcCCCCCCCCccEE
Q 006697 456 PPIGVFFAAVA--P--H---LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMK-NAIPLEGNGDCSWA 527 (635)
Q Consensus 456 ~p~~~ll~~~~--p--~---l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~-~l~~g~~~~~~~~v 527 (635)
..+||++.+.+ | . .++|+|||+|+|. ++.++|+|+.... .+....|.+|+||+ ++++| +.|
T Consensus 184 ~~pGQ~v~l~~~~~~~~~~~~~~R~ySi~s~p~--~~~~~i~Vk~~~~---~~~~~~G~~S~~L~~~l~~G------d~v 252 (399)
T 4g1v_A 184 ITPGQYITVNTHPIRQENQYDALRHYSLCSAST--KNGLRFAVKMEAA---RENFPAGLVSEYLHKDAKVG------DEI 252 (399)
T ss_dssp CCTTCEEEEEECCCSTTCCSCEEEEEEBSCSCC--TTCEEEEEECCCC---BTTBCCCHHHHHHHHTCCTT------CEE
T ss_pred CCCCCEEEEEEeCCCCCCccceeeeecccCCCC--CCeEEEEEEeccC---CCCCCCCEehhHHHhCCCCC------CEE
Confidence 35788888763 3 3 4579999999985 4779999987321 11123799999997 69999 899
Q ss_pred EEEeeCCCCcCCCC----CCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHc
Q 006697 528 PIFIRPSNFKLPAN----PSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEE 603 (635)
Q Consensus 528 ~i~~~~g~F~lp~~----~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~ 603 (635)
.|.+|.|.|.++.+ ..+|+||||+|||||||++|++++... + ...+++|+||+|+.+ |++|.+||+++++.
T Consensus 253 ~v~gP~G~f~l~~~~~~~~~~~~vlIagG~GitP~~s~l~~l~~~---~-~~~~v~l~~~~r~~~-~~~~~~el~~l~~~ 327 (399)
T 4g1v_A 253 KLSAPAGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKC---N-PNRPIYWIQSSYDEK-TQAFKKHVDELLAE 327 (399)
T ss_dssp EEEEEECSCCCCTTTTTCSSSCEEEEEEGGGHHHHHHHHHHHHHH---C-TTSCEEEEEEESSST-TSTTHHHHHHHHTT
T ss_pred EEEecccceeeCcccccCCCCCEEEEecceeHhHHHHHHHHHHHc---C-CCCCEEEEEecCCHH-HhhhHHHHHHHHHh
Confidence 99999999999876 578999999999999999999998863 2 457999999999988 99999999999988
Q ss_pred CCccEEEEEEecCCCCcccchh
Q 006697 604 GVISELILAFSREGSQKEYVQH 625 (635)
Q Consensus 604 g~~~~l~~a~SR~~~~k~yVQd 625 (635)
..++++++++|+++ ++++.
T Consensus 328 ~~~~~~~~~~s~~~---g~~~~ 346 (399)
T 4g1v_A 328 CANVDKIIVHTDTE---PLINA 346 (399)
T ss_dssp CSSEEEEEEETTTS---CCCCH
T ss_pred CCCcEEEEEEeCCC---CcccH
Confidence 88889999999864 45543
No 43
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.79 E-value=1.2e-20 Score=192.07 Aligned_cols=152 Identities=16% Similarity=0.146 Sum_probs=125.1
Q ss_pred CChhhHHHHhcC---CCCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHhhcCCCCCCCCccEEEEE-e
Q 006697 456 PPIGVFFAAVAP---HLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIF-I 531 (635)
Q Consensus 456 ~p~~~ll~~~~p---~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~l~~g~~~~~~~~v~i~-~ 531 (635)
..+||++.+.+| ...+|+|||+|+|.. +.++|+|+.+. .|.+|+||.++++| +.|.|. +
T Consensus 31 ~~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~~~~~i~~~~---------~G~~s~~l~~l~~G------d~v~v~~g 93 (257)
T 2qdx_A 31 FKTGQFVMIGLEVDGRPLMRAYSIASPNYE--EHLEFFSIKVP---------DGPLTSRLQHLKEG------DELMVSRK 93 (257)
T ss_dssp CCTTCEEEEEEEETTEEEEEEEECCSCTTS--SEEEEEEECCT---------TCTTHHHHTTCCTT------CEEEECSC
T ss_pred cCCCCEEEEEecCCCCceeeeeEeecCCCC--CeEEEEEEEeC---------CCcchhHHHhCCCC------CEEEEecC
Confidence 478999888755 246899999999863 78999988742 59999999999999 899999 7
Q ss_pred eCCCCcCCCCC-CCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHH-HHHH-----c-
Q 006697 532 RPSNFKLPANP-SVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELN-NFEE-----E- 603 (635)
Q Consensus 532 ~~g~F~lp~~~-~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~-~~~~-----~- 603 (635)
|.|.|.++... .+++||||+|||||||+++++++.... ...+++|+||+|+.+ |++|.+||+ ++++ +
T Consensus 94 p~G~f~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~----~~~~v~l~~~~r~~~-~~~~~~el~~~l~~~~~~~~~ 168 (257)
T 2qdx_A 94 PTGTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYE----RYEKVILVHGVRWVS-ELAYADFITKVLPEHEYFGDQ 168 (257)
T ss_dssp CBCSCCGGGBCSCSEEEEEEEGGGGHHHHHHTTCHHHHH----HCSEEEEEEEESSGG-GCTTHHHHHTTGGGCTTTHHH
T ss_pred CCCCccCCcccCCCeEEEEEeceEHHHHHHHHHHHHhcC----CCCeEEEEEEcCCHH-HhHhHHHHHHHHHhchhhhcc
Confidence 99999887543 579999999999999999999876521 236899999999998 999999999 8765 2
Q ss_pred -CCccEEEEEEecCCC-CcccchhHHhc
Q 006697 604 -GVISELILAFSREGS-QKEYVQHKMMD 629 (635)
Q Consensus 604 -g~~~~l~~a~SR~~~-~k~yVQd~l~~ 629 (635)
...++++.++||+.. .++||++.+.+
T Consensus 169 ~~~~~~~~~~~s~~~~~~~g~v~~~l~~ 196 (257)
T 2qdx_A 169 VKEKLIYYPLVTREPFRNQGRQTDLMRS 196 (257)
T ss_dssp HHHHEEEEEEESSSCCSSBSCHHHHHHH
T ss_pred CCCcEEEEEEecCCCcccCceechhhhh
Confidence 245688999999854 47899998764
No 44
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.79 E-value=1.4e-19 Score=196.22 Aligned_cols=145 Identities=17% Similarity=0.252 Sum_probs=122.0
Q ss_pred CChhhHHHHhcC--C---CCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHhh-cCCCCCCCCccEEEE
Q 006697 456 PPIGVFFAAVAP--H---LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKN-AIPLEGNGDCSWAPI 529 (635)
Q Consensus 456 ~p~~~ll~~~~p--~---l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~-l~~g~~~~~~~~v~i 529 (635)
..+||++.+.+| . .++|+|||+|+|. .+.++|+|+.+.. ++...|.+|+||++ +++| +.|.|
T Consensus 185 ~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~~~----~~~~~G~~S~~L~~~l~~G------d~v~v 252 (403)
T 1cqx_A 185 FEPGQYTSVAIDVPALGLQQIRQYSLSDMPN--GRTYRISVKREGG----GPQPPGYVSNLLHDHVNVG------DQVKL 252 (403)
T ss_dssp CCTTCEEEEEEEETTTTEEEEEEEECCSCCC--SSCEEEEEECCCB----TTBCCCHHHHHHHHHCCTT------CEEEE
T ss_pred CCCCCEEEEEEecCCCCcceeecceecCCCC--CCeEEEEEEECCC----CCCCCCeehHHHhhCCCCC------CEEEE
Confidence 468898887655 2 3579999999985 4789999987521 12235999999995 9999 89999
Q ss_pred EeeCCCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccEE
Q 006697 530 FIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISEL 609 (635)
Q Consensus 530 ~~~~g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~l 609 (635)
.+|.|.|.++.+..+|+||||+|||||||++|++++.. + ...+++||||+|+.+ |++|++||+++++.+.++++
T Consensus 253 ~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~----~-~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~ 326 (403)
T 1cqx_A 253 AAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQ----A-PPRQVVFVHGARNSA-VHAMRDRLREAAKTYENLDL 326 (403)
T ss_dssp CCCBCSCSCCTTCCSCEEEEESSCCHHHHHHHHHHHTC----S-SCCCEEEEEEESCSS-SCHHHHHHHHHHHHCTTEEE
T ss_pred ecCccCcccCCCCCCCEEEEEecccHhhHHHHHHHHHh----C-CCCcEEEEEEeCChh-hCcHHHHHHHHHHhCCCcEE
Confidence 99999999976667899999999999999999999863 1 357899999999999 99999999999988888899
Q ss_pred EEEEecCCC
Q 006697 610 ILAFSREGS 618 (635)
Q Consensus 610 ~~a~SR~~~ 618 (635)
++++||++.
T Consensus 327 ~~~~s~~~~ 335 (403)
T 1cqx_A 327 FVFYDQPLP 335 (403)
T ss_dssp EEEESSCCT
T ss_pred EEEECCCCc
Confidence 999998754
No 45
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.79 E-value=8e-21 Score=194.86 Aligned_cols=153 Identities=17% Similarity=0.169 Sum_probs=122.9
Q ss_pred CCChhhHHHHhcC---CCCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHhhcCCCCCCCCccEEEEE-
Q 006697 455 TPPIGVFFAAVAP---HLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIF- 530 (635)
Q Consensus 455 ~~p~~~ll~~~~p---~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~l~~g~~~~~~~~v~i~- 530 (635)
...+||++.+.+| ....|+|||+|+|. .+.++|+|+.+. .|.+|+||+++++| +.|.|.
T Consensus 46 ~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~--~~~~~~~v~~~~---------~G~~s~~l~~l~~G------d~v~v~~ 108 (271)
T 4fk8_A 46 RFNNGEFTMVGLEVDGKPLTRAYSIVSPNY--EEHLEFFSIKVQ---------NGPLTSRLQHLKVG------DPVLIGK 108 (271)
T ss_dssp CCCTTCEEEEEEEETTEEEEEEEECCSCTT--SSSEEEEEECCT---------TCTTHHHHTTCCTT------CEEEEES
T ss_pred CcCCCCEEEEEccCCCceeeeeEeccCCCC--CCcEEEEEEEEC---------CCchhhHHhcCCCC------CEEEEec
Confidence 3468999888756 23579999999885 467898887642 59999999999999 899999
Q ss_pred eeCCCCcCCC-CCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCC----
Q 006697 531 IRPSNFKLPA-NPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGV---- 605 (635)
Q Consensus 531 ~~~g~F~lp~-~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~---- 605 (635)
+|.|.|.++. +..+++||||+|||||||+++++++.... ...+++|+||+|+.+ |++|.+||+++.++..
T Consensus 109 gP~G~~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~----~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~ 183 (271)
T 4fk8_A 109 KPTGTLVADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYE----RFDKVVLTHTCRLKG-ELAYMDYIKHDLPGHEYLGD 183 (271)
T ss_dssp CCBCSCCGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHH----HCSEEEEEECCCSHH-HHHHHHHHHTCCTTCTTHHH
T ss_pred CCCcceecCCcCCCCeEEEEECCEEHHHHHHHHHHHHhcC----CCCCEEEEEecCCHH-HHhHHHHHHHHHHhCccccc
Confidence 9999998875 35689999999999999999999987532 246899999999998 9999999999877654
Q ss_pred ----ccEEEEEEecCCC-CcccchhHHhc
Q 006697 606 ----ISELILAFSREGS-QKEYVQHKMMD 629 (635)
Q Consensus 606 ----~~~l~~a~SR~~~-~k~yVQd~l~~ 629 (635)
.+++++++||++. .++||++.+.+
T Consensus 184 ~~~~~~~~~~~~s~~~~~~~G~v~~~~~~ 212 (271)
T 4fk8_A 184 VIREKLVYYPTVTREEFENEGRITDLIAS 212 (271)
T ss_dssp HHHHHEEEEECC-------CCHHHHHHHH
T ss_pred cccceEEEEEEecCCccccccccChHHhc
Confidence 4678999999765 57899987754
No 46
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.78 E-value=1.6e-19 Score=196.03 Aligned_cols=180 Identities=16% Similarity=0.077 Sum_probs=140.7
Q ss_pred HHHHHHHhhcccccccchhHHHHHHHHHHHHHhhheeeeeccCCCCcCCCCCCCCCCCCCCCccchHHHHhc------CC
Q 006697 10 VKFVESALGVSLGDSVTDTVILIATTSFAVVIGLLVLVWKKSSSDRSKEVKPVVPLKPLSAKDEDDEADIAA------GK 83 (635)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 83 (635)
.++|.++|+++. .+++.+||+. ||. +||++.. ++++.|.+ .+
T Consensus 218 ~~~v~~~L~kl~----~Ldi~~I~P~-HGp-------i~r~~~~--------------------~ii~~Y~~w~~~~~~~ 265 (410)
T 4dik_A 218 KNYILEGAEKLS----SLKIKALLPG-HGL-------IWKKDPQ--------------------RLLNHYVSVAKGDPKK 265 (410)
T ss_dssp HHHHHHHHHHHH----TSCCSEEEES-SSC-------BBSSCHH--------------------HHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHh----CCCCCEEecC-Ccc-------hhhcCHH--------------------HHHHHHHHhhcccccc
Confidence 356889999998 5688899999 999 8887654 45554443 45
Q ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCc-hHHHhhhccCCeEEEEEecCCCCCCChhHHHHH
Q 006697 84 TKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDD-EQYEEKLKKETLAFFMVATYGDGEPTDNAARFY 162 (635)
Q Consensus 84 ~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~-~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~ 162 (635)
++|+|+|+|+|||||++|+.|++.+.++ |+.+.++++.+.+..+ ..++.++.+++.+||+||||+ |++++.+..|+
T Consensus 266 ~~v~I~Y~S~yGnTe~mA~~ia~gl~~~--Gv~~~~~~~~d~~~~~~s~i~~~i~~~~~ivlGspT~~-~~~~p~~~~~l 342 (410)
T 4dik_A 266 GKVTVIYDSMYGFVENVMKKAIDSLKEK--GFTPVVYKFSDEERPAISEILKDIPDSEALIFGVSTYE-AEIHPLMRFTL 342 (410)
T ss_dssp TEEEEEEECSSSHHHHHHHHHHHHHHHT--TCEEEEEEECSSCCCCHHHHHHHSTTCSEEEEEECCTT-SSSCHHHHHHH
T ss_pred cceeeEEecccChHHHHHHHHHHHHHhc--CCceEEEEeccCCCCCHHHHHHHHHhCCeEEEEeCCcC-CcCCHHHHHHH
Confidence 6899999999999999999999999998 8887766554444322 226777889999999999995 66777899999
Q ss_pred HHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHHH
Q 006697 163 KWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWREL 234 (635)
Q Consensus 163 ~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~ 234 (635)
..+.... ++++++++|| +|+|.+.+++.+.++|+++|++.+.+.. .-.....++.+++-.+.
T Consensus 343 ~~l~~~~-----~~~K~~~~FG----SyGWsg~a~~~~~~~l~~~~~~~v~~~~-~~~~~~de~~lee~~~~ 404 (410)
T 4dik_A 343 LEIIDKA-----NYEKPVLVFG----VHGWAPSAERTAGELLKETKFRILSFTE-IKGSNMDERKIEEAISL 404 (410)
T ss_dssp HHHHHHC-----CCCCEEEEEE----ECCCCCTTSCCHHHHHTTSSCEEEEEEE-ECSTTCCHHHHHHHHHH
T ss_pred HHHHhcc-----cCCCEEEEEE----CCCCCcHHHHHHHHHHHHCCCEEECcEE-EECCCCCHHHHHHHHHH
Confidence 9998765 7899999999 7999999999999999999998876543 32222345555544433
No 47
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=99.77 E-value=5.6e-19 Score=167.64 Aligned_cols=141 Identities=14% Similarity=0.066 Sum_probs=114.7
Q ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHHHH
Q 006697 84 TKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYK 163 (635)
Q Consensus 84 ~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~ 163 (635)
|+|+|+|+|+||||+++|+.|++++.+. |++++++|+.+.+.++ +..++.+++.+||++|||| |.+|. ..|++
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~--g~~v~~~~~~~~~~~~--~~~~~~~~d~ii~Gspty~-g~~p~--~~fl~ 73 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKT--GVAVEMVDLRAVDPQE--LIEAVSSARGIVLGTPPSQ-PSEAV--ATALS 73 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHT--TCCEEEEETTTCCHHH--HHHHHHHCSEEEEECCBSS-CCHHH--HHHHH
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhC--CCeEEEEECCCCCHHH--HHHHHHhCCEEEEEcCCcC-CchhH--HHHHH
Confidence 5799999999999999999999999987 8889999999988766 5556778999999999996 77775 77999
Q ss_pred HHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCC--CchHHHHHHHHHHHHHHH
Q 006697 164 WFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQ--CIEDDFTAWRELVWPELD 240 (635)
Q Consensus 164 ~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~--~~e~~f~~W~~~l~~~L~ 240 (635)
.|.... ++++++++|| +|+|+|.+.+.+++.|+++|++.+.+...+.... ...+.+.+|.+.+...|.
T Consensus 74 ~l~~~~-----l~gk~v~~fg----s~g~~g~a~~~l~~~l~~~G~~~v~~~~~~~~~P~~~dl~~~~~~g~~la~~l~ 143 (161)
T 3hly_A 74 TIFAAA-----HNKQAIGLFD----SYGGDDEPIDALLAQFRNLGLHTAFPPIRVKDQPTEAIYQQCEESGTDLGQWLT 143 (161)
T ss_dssp HHHHHC-----CTTSEEEEEC----CCCSSBCCHHHHHHHHHHTTCEESSSCBCCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhh-----hCCCEEEEEE----cCCCCcHHHHHHHHHHHHCCCEEecCceEEeeCCCHHHHHHHHHHHHHHHHHHH
Confidence 887643 7899999999 6777889999999999999999987655443321 233555677777766654
No 48
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=99.77 E-value=5.4e-19 Score=167.51 Aligned_cols=144 Identities=14% Similarity=0.065 Sum_probs=118.6
Q ss_pred CCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCC-CcCchHHHhhhccCCeEEEEEecCCCCCCChhHHH
Q 006697 82 GKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDY-AMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAAR 160 (635)
Q Consensus 82 ~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~-~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~ 160 (635)
.+++|+|+|+|+||||+++|+.|++.+.+. |+.++++|+.+. +.++ ++.++.+++.+||++|||+ |++| +..
T Consensus 3 ~~~kv~IvY~S~~GnT~~iA~~ia~~l~~~--g~~v~~~~~~~~~~~~~--~~~~~~~~d~ii~Gspty~-g~~p--~~~ 75 (159)
T 3fni_A 3 AETSIGVFYVSEYGYSDRLAQAIINGITKT--GVGVDVVDLGAAVDLQE--LRELVGRCTGLVIGMSPAA-SAAS--IQG 75 (159)
T ss_dssp CCCEEEEEECTTSTTHHHHHHHHHHHHHHT--TCEEEEEESSSCCCHHH--HHHHHHTEEEEEEECCBTT-SHHH--HHH
T ss_pred CCCEEEEEEECCChHHHHHHHHHHHHHHHC--CCeEEEEECcCcCCHHH--HHHHHHhCCEEEEEcCcCC-CCcc--HHH
Confidence 467899999999999999999999999988 889999999988 7665 5566788999999999997 7776 378
Q ss_pred HHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCC--CchHHHHHHHHHHHHH
Q 006697 161 FYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQ--CIEDDFTAWRELVWPE 238 (635)
Q Consensus 161 F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~--~~e~~f~~W~~~l~~~ 238 (635)
|++.|.... ++++++++|| +|+|+|.+.+.+.+.|+++|++.+.+...+...- ...+...+|.+.+.+.
T Consensus 76 ~l~~l~~~~-----~~~k~va~fg----s~g~~~~a~~~l~~~l~~~G~~~v~~~~~~~~~P~~~dl~~~~~~g~~la~~ 146 (159)
T 3fni_A 76 ALSTILGSV-----NEKQAVGIFE----TGGGDDEPIDPLLSKFRNLGLTTAFPAIRIKQTPTENTYKLCEEAGTDLGQW 146 (159)
T ss_dssp HHHHHHHHC-----CTTSEEEEEC----CSSSCBCCHHHHHHHHHHTTCEESSSCBCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhc-----ccCCEEEEEE----cCCCCcHHHHHHHHHHHHCCCEEecCceEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 999887644 7899999999 6788898999999999999999987765554322 2345566777777766
Q ss_pred HHH
Q 006697 239 LDQ 241 (635)
Q Consensus 239 L~~ 241 (635)
+.+
T Consensus 147 ~~~ 149 (159)
T 3fni_A 147 VTR 149 (159)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 49
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.76 E-value=4.5e-19 Score=186.69 Aligned_cols=148 Identities=16% Similarity=0.179 Sum_probs=121.3
Q ss_pred CChhhHHHHhcCCCCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCc-cchHHh-hcCCCCCCCCccEEEEEeeC
Q 006697 456 PPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGV-CSTWMK-NAIPLEGNGDCSWAPIFIRP 533 (635)
Q Consensus 456 ~p~~~ll~~~~p~l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~-~S~~L~-~l~~g~~~~~~~~v~i~~~~ 533 (635)
..+|||+.+.+|...+|+|||+|+|.. .+.++|+|+.+. .|. +|+||+ ++++| +.|.|.+|.
T Consensus 39 ~~pGQ~v~l~~~~g~~R~ySi~s~~~~-~~~l~i~Vk~~~---------~G~g~S~~L~~~l~~G------d~v~v~gP~ 102 (321)
T 2pia_A 39 FEAGANLTVAVPNGSRRTYSLCNDSQE-RNRYVIAVKRDS---------NGRGGSISFIDDTSEG------DAVEVSLPR 102 (321)
T ss_dssp CCTTCEEEEECTTSCEEEEECCSCTTC-CSEEEEEEECCT---------TSCSHHHHHHHSCCTT------CEEEECCCB
T ss_pred CCCCCEEEEECCCCCcEEEEeCCCCCC-CCeEEEEEEEec---------CCcchhHHHHhcCCCC------CEEEEeCCc
Confidence 468999988767668999999999864 578999998742 577 899999 79999 899999999
Q ss_pred CCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccEEEEEE
Q 006697 534 SNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAF 613 (635)
Q Consensus 534 g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~l~~a~ 613 (635)
|.|.++.+ .+++||||+|||||||++|++++.. ++ ..+++|+||+|+++ |++|.+||++++ .+.. +.+.+
T Consensus 103 g~f~l~~~-~~~~vliagG~GItP~~s~l~~l~~---~~--~~~v~l~~~~r~~~-~~~~~~el~~l~-~~~~--~~~~~ 172 (321)
T 2pia_A 103 NEFPLDKR-AKSFILVAGGIGITPMLSMARQLRA---EG--LRSFRLYYLTRDPE-GTAFFDELTSDE-WRSD--VKIHH 172 (321)
T ss_dssp CCSCCCTT-CSEEEEEEEGGGHHHHHHHHHHHHH---HC--SSEEEEEEEESCGG-GCTTHHHHHSTT-TTTT--EEEEE
T ss_pred cccccCCC-CCCEEEEEecccHhHHHHHHHHHHH---cC--CCcEEEEEEECChh-hhHHHHHHhcCc-cCCe--EEEEE
Confidence 99999864 6799999999999999999999876 22 26899999999998 999999999885 3333 45556
Q ss_pred ecCCC-CcccchhHHhc
Q 006697 614 SREGS-QKEYVQHKMMD 629 (635)
Q Consensus 614 SR~~~-~k~yVQd~l~~ 629 (635)
+++.. .+.++++.+.+
T Consensus 173 ~~~~~~g~~~~~~ll~~ 189 (321)
T 2pia_A 173 DHGDPTKAFDFWSVFEK 189 (321)
T ss_dssp CTTCTTSCCCHHHHHSS
T ss_pred CCCcccCccCHHHHhcc
Confidence 76532 45678877754
No 50
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=99.72 E-value=2.5e-17 Score=150.63 Aligned_cols=131 Identities=20% Similarity=0.286 Sum_probs=108.8
Q ss_pred EEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCCh-hHHHHHHH
Q 006697 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTD-NAARFYKW 164 (635)
Q Consensus 86 v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~-na~~F~~~ 164 (635)
++|+|+|+||||+++|+.|++.+.+. |++++++++++++.++ +.+++.+||++|||+.|.+|+ ++..|+++
T Consensus 2 i~iiy~S~tGnT~~~a~~i~~~l~~~--g~~v~~~~~~~~~~~~------l~~~d~vi~g~p~y~~~~~~~~~~~~fl~~ 73 (137)
T 2fz5_A 2 VEIVYWSGTGNTEAMANEIEAAVKAA--GADVESVRFEDTNVDD------VASKDVILLGCPAMGSEELEDSVVEPFFTD 73 (137)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHHT--TCCEEEEETTSCCHHH------HHTCSEEEEECCCBTTTBCCHHHHHHHHHH
T ss_pred EEEEEECCCChHHHHHHHHHHHHHhC--CCeEEEEEcccCCHHH------HhcCCEEEEEccccCCCCCCHHHHHHHHHH
Confidence 78999999999999999999999887 8889999999887655 789999999999999999888 49999999
Q ss_pred HhcCCCCCCCCCCceEEEEEecCcchhH-HHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHHHH
Q 006697 165 FTEGNDRGPWLQQLKFGVFGLGNRQYEH-FNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELV 235 (635)
Q Consensus 165 L~~~~~~~~~l~~~~~aVFGlGds~Y~~-f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l 235 (635)
+... ++++++++||. |++ ||.+.+.+++.|+.+|++.+ +...++...+..+.+.+|.+++
T Consensus 74 l~~~------l~~k~~~~~~t----~g~~~~~~~~~l~~~l~~~g~~~~-~~~~~~g~~~~~~~~~~~~~~l 134 (137)
T 2fz5_A 74 LAPK------LKGKKVGLFGS----YGWGSGEWMDAWKQRTEDTGATVI-GTAIVNEMPDNAPECKELGEAA 134 (137)
T ss_dssp HGGG------CSSCEEEEEEE----ESSCCSHHHHHHHHHHHHTTCEEE-EEEEEESSSSSCTHHHHHHHHH
T ss_pred hhhh------cCCCEEEEEEe----cCCCCchHHHHHHHHHHHCCCEEc-CcEEEeeCCChHHHHHHHHHHH
Confidence 9642 88999999995 544 68999999999999999988 4334432221156677777655
No 51
>2xod_A NRDI protein, NRDI; flavoprotein, redox protein, ribonucleotide reductase; HET: FMN; 0.96A {Bacillus anthracis} PDB: 2xoe_A* 2x2o_A* 2x2p_A*
Probab=99.71 E-value=1.1e-17 Score=150.51 Aligned_cols=116 Identities=16% Similarity=0.162 Sum_probs=86.7
Q ss_pred EEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHHHHHH
Q 006697 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWF 165 (635)
Q Consensus 86 v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~~L 165 (635)
++|+|+|+||||+++|+.|+ +. + + ++++ +. + .++.++|++||||+|++|+++..|++.
T Consensus 1 ~~I~Y~S~tGnT~~~A~~ia--~~----~--~---~i~~---~~------~-~~~~ii~g~pt~~~g~~p~~~~~fl~~- 58 (119)
T 2xod_A 1 MLVAYDSMTGNVKRFIHKLN--MP----A--V---QIGE---DL------V-IDEDFILITYTTGFGNVPERVLEFLER- 58 (119)
T ss_dssp CEEEECCSSSHHHHHHHHHT--SC----E--E---ECCT---TC------C-CCSCEEEEECCBTTTBCCHHHHHHHHH-
T ss_pred CEEEEECCChhHHHHHHHhc--cc----C--C---CcCc---cc------c-cCCCEEEEEeecCCCcCCHHHHHHHHH-
Confidence 47999999999999999998 22 2 2 3322 22 3 488999999999999999999999865
Q ss_pred hcCCCCCCCCCCceEEEEEecCcchhH-HHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHHHHH
Q 006697 166 TEGNDRGPWLQQLKFGVFGLGNRQYEH-FNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVW 236 (635)
Q Consensus 166 ~~~~~~~~~l~~~~~aVFGlGds~Y~~-f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~ 236 (635)
+++++++|||+||+.|++ ||.+++.++++|.. ..... ..+..++...+.+.+|.++++
T Consensus 59 ---------~~~~~~~v~g~G~~~y~~~~~~~~~~l~~~~~~---~~~~~-~~~~~~~~d~~~~~~~~~~i~ 117 (119)
T 2xod_A 59 ---------NNEKLKGVSASGNRNWGDMFGASADKISAKYEV---PIVSK-FELSGTNNDVEYFKERVREIA 117 (119)
T ss_dssp ---------HGGGEEEEEEEECGGGGGGTTHHHHHHHHHHTC---CEEEE-EETTCCHHHHHHHHHHHHHHT
T ss_pred ---------cCCCEEEEEEeCCChHHHHHHHHHHHHHHHhCC---ccEEE-EecCCCHHHHHHHHHHHHHhc
Confidence 346899999999999977 99999999999753 22221 122211223456788987775
No 52
>1rlj_A NRDI protein; flavoprotein, FMN, thioredoxin, alpha/beta/alpha sandwich, structural genomics, PSI, protein structure initiative; HET: FMN; 2.00A {Bacillus subtilis} SCOP: c.23.5.7
Probab=99.63 E-value=1.7e-16 Score=146.80 Aligned_cols=123 Identities=17% Similarity=0.189 Sum_probs=90.5
Q ss_pred CCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHH
Q 006697 82 GKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARF 161 (635)
Q Consensus 82 ~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F 161 (635)
.+|++.|+|+|+||||+++|++|++. . .+++.+ . +..++.+|+++||||.|++|+++.+|
T Consensus 7 ~~m~i~I~Y~S~TGNt~~vA~~l~~~---------~-~~~i~~----~------~~~~~~~ilv~pTyG~G~~P~~v~~F 66 (139)
T 1rlj_A 7 SNAMVQIIFDSKTGNVQRFVNKTGFQ---------Q-IRKVDE----M------DHVDTPFVLVTYTTNFGQVPASTQSF 66 (139)
T ss_dssp HHSCCEEEECCSSSHHHHHHTTSCCS---------E-EEETTS----C------SCCCSCEEEEECCBGGGBCCHHHHHH
T ss_pred CCCEEEEEEECCChhHHHHHHHhccc---------c-ceEecc----c------cccCCCEEEEEcCcCCCcCcHHHHHH
Confidence 45678999999999999999998642 0 224432 2 45567899999999999999999988
Q ss_pred HHHHhcCCCCCCCCCCceEEEEEecCcch-hHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHHHHHHH
Q 006697 162 YKWFTEGNDRGPWLQQLKFGVFGLGNRQY-EHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPE 238 (635)
Q Consensus 162 ~~~L~~~~~~~~~l~~~~~aVFGlGds~Y-~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~~~ 238 (635)
++.. +++.|+|||+||++| +.||.+++.+++++ |...+.. -+.+-.....+.+.+|.+++|..
T Consensus 67 l~~~----------~~~~~~V~g~Gd~~yg~~f~~a~~~i~~~~---~~~~~~~-~el~g~~~D~~~~~~~~~~~~~~ 130 (139)
T 1rlj_A 67 LEKY----------AHLLLGVAASGNKVWGDNFAKSADTISRQY---QVPILHK-FELSGTSKDVELFTQEVERVVTK 130 (139)
T ss_dssp HHHH----------GGGEEEEEEEECGGGGGGTTHHHHHHHHHH---TCCEEEE-EETTCCHHHHHHHHHHHHHHHHH
T ss_pred HHhC----------CCCEEEEEecCCCcHHHHHHHHHHHHHHHc---CCCCcce-EEEcCCHHHHHHHHHHHHHHHHH
Confidence 8531 247899999999999 78999999998776 5443321 12221113457788999888754
No 53
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.57 E-value=1e-15 Score=164.90 Aligned_cols=141 Identities=14% Similarity=0.013 Sum_probs=112.4
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHHH
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFY 162 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~ 162 (635)
+++++|+|+|+||||+++|+.+++.+.+. |+.++++++.+.+..+ +..++.+++.+||++|||+.|.+| .++.|+
T Consensus 251 ~~~i~i~y~S~~GnT~~lA~~ia~~l~~~--g~~v~~~~~~~~~~~~--~~~~~~~~d~ii~g~p~y~~~~~~-~~~~~l 325 (398)
T 1ycg_A 251 KAKAVIAYDTMWLSTEKMAHALMDGLVAG--GCEVKLFKLSVSDRND--VIKEILDARAVLVGSPTINNDILP-VVSPLL 325 (398)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHT--TCEEEEEEGGGSCHHH--HHHHHHHCSEEEEECCCBTTBCCG-GGHHHH
T ss_pred cCeEEEEEECCccHHHHHHHHHHHHHHhc--CCeEEEEECCCCCHHH--HHHHHHHCCEEEEECCccCccchH-HHHHHH
Confidence 68999999999999999999999999877 8889999998776654 555678999999999999777776 488899
Q ss_pred HHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecc-eeecCCC--CchHHHHHHHHHHHH
Q 006697 163 KWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPL-GLGDDDQ--CIEDDFTAWRELVWP 237 (635)
Q Consensus 163 ~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~-g~gD~~~--~~e~~f~~W~~~l~~ 237 (635)
+++.... ++++++++|| +|+|+|.+.+.+++.|+.+|++.+.+. ...+... ...+.+.+|.+++..
T Consensus 326 ~~l~~~~-----~~~k~~~~~~----s~g~~~~a~~~l~~~l~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 394 (398)
T 1ycg_A 326 DDLVGLR-----PKNKVGLAFG----AYGWGGGAQKILEERLKAAKIELIAEPGPTVQWVPRGEDLQRCYELGRKIAA 394 (398)
T ss_dssp HHHHHHC-----CSSCEEEEEE----EESSSCCHHHHHHHHHHHTTCEESCSSCCEEESSCCHHHHHHHHHHHHHHHH
T ss_pred HHHhccc-----cCCCEEEEEE----eCCCchHHHHHHHHHHHHCCeEEecCceEEEecCCCHHHHHHHHHHHHHHHH
Confidence 9987643 7899999999 578899999999999999999998754 3333221 223344455544433
No 54
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.52 E-value=5.9e-14 Score=151.30 Aligned_cols=146 Identities=16% Similarity=0.124 Sum_probs=118.4
Q ss_pred CCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHH
Q 006697 82 GKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARF 161 (635)
Q Consensus 82 ~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F 161 (635)
.+++++|+|+|+||||+++|+.|++.+.+. |+.++++++.+.+.++ +..++.+++.+||++||||.|.+| .+..|
T Consensus 251 ~~~kv~i~y~S~~Gnt~~lA~~i~~~l~~~--g~~v~~~~~~~~~~~~--~~~~~~~~d~ii~gsp~~~~~~~~-~~~~~ 325 (402)
T 1e5d_A 251 PTNKVVIFYDSMWHSTEKMARVLAESFRDE--GCTVKLMWCKACHHSQ--IMSEISDAGAVIVGSPTHNNGILP-YVAGT 325 (402)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHHHHT--TCEEEEEETTTSCHHH--HHHHHHTCSEEEEECCCBTTBCCH-HHHHH
T ss_pred CCCcEEEEEECCChhHHHHHHHHHHHHHhC--CCeEEEEECCCCCHHH--HHHHHHHCCEEEEECCccCCCchH-HHHHH
Confidence 368999999999999999999999999877 8889999999877655 556678999999999999777765 68999
Q ss_pred HHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCC--CchHHHHHHHHHHHHHH
Q 006697 162 YKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQ--CIEDDFTAWRELVWPEL 239 (635)
Q Consensus 162 ~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~--~~e~~f~~W~~~l~~~L 239 (635)
++++.... ++++++++|| +|+++|.+.+.+.+.|.++|++.+.+...++... ...+.+.+|.+++...+
T Consensus 326 l~~l~~~~-----l~~k~~~~f~----t~g~~~~a~~~l~~~l~~~G~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l 396 (402)
T 1e5d_A 326 LQYIKGLR-----PQNKIGGAFG----SFGWSGESTKVLAEWLTGMGFDMPATPVKVKNVPTHADYEQLKTMAQTIARAL 396 (402)
T ss_dssp HHHHHHTC-----CCSCEEEEEE----EESSSCHHHHHHHHHHHHTTCBCCSCCEEEESSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhcc-----cCCCEEEEEE----cCCCccHHHHHHHHHHHHCCCEEecCceEEeeCCCHHHHHHHHHHHHHHHHHH
Confidence 99987643 7899999999 5778899999999999999999886444443322 23455667777776665
Q ss_pred HH
Q 006697 240 DQ 241 (635)
Q Consensus 240 ~~ 241 (635)
.+
T Consensus 397 ~~ 398 (402)
T 1e5d_A 397 KA 398 (402)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 55
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=99.49 E-value=3.7e-13 Score=130.44 Aligned_cols=149 Identities=15% Similarity=0.049 Sum_probs=112.0
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHh-hhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHH
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKA-RYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARF 161 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~-~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F 161 (635)
+++|+|+|+|+||||+.+|+.|++.+.+ . |++++++++.+.+.++ +.+++.+||++||| .|.+|..++.|
T Consensus 4 M~kiliiy~S~~GnT~~~a~~i~~~l~~~~--g~~v~~~~l~~~~~~~------l~~aD~ii~gsP~y-~g~~~~~lk~f 74 (188)
T 2ark_A 4 MGKVLVIYDTRTGNTKKMAELVAEGARSLE--GTEVRLKHVDEATKED------VLWADGLAVGSPTN-MGLVSWKMKRF 74 (188)
T ss_dssp CEEEEEEECCSSSHHHHHHHHHHHHHHTST--TEEEEEEETTTCCHHH------HHHCSEEEEEEECB-TTBCCHHHHHH
T ss_pred CCEEEEEEECCCcHHHHHHHHHHHHHhhcC--CCeEEEEEhhhCCHHH------HHhCCEEEEEeCcc-CCcCCHHHHHH
Confidence 6799999999999999999999999987 7 8889999999887555 88999999999999 89999999999
Q ss_pred HHHHhcCCCCCCCCCCceEEEEEe-cCcchhHHHHHHHHHHHHHHHCCCEEeec------cee--------ecCC-CCch
Q 006697 162 YKWFTEGNDRGPWLQQLKFGVFGL-GNRQYEHFNKIGIVLDEELCKQGGARLVP------LGL--------GDDD-QCIE 225 (635)
Q Consensus 162 ~~~L~~~~~~~~~l~~~~~aVFGl-Gds~Y~~f~~~~k~ld~~L~~lGa~~v~~------~g~--------gD~~-~~~e 225 (635)
++++..... ..++++++++||. |+.. +.+....+.+.+.|..+|+..+.. ... +.-+ +...
T Consensus 75 ld~~~~~~~--~~l~gk~~~~~~t~g~~~-g~~~~~l~~l~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~ 151 (188)
T 2ark_A 75 FDDVLGDLW--GEIDGKIACAFSSSGGWG-GGNEVACMSILTMLMNFGFLVFGVTDYVGKKFTLHYGAVVAGEPRSEEEK 151 (188)
T ss_dssp HHHTGGGTT--TSCTTCEEEEEEEESSBT-SSHHHHHHHHHHHHHHTTCEECCEEEEEETTEEESSSEEEESSCCSHHHH
T ss_pred HHHHhhhhH--HHhCCCeEEEEEECCCCC-CCHHHHHHHHHHHHHHCCcEEeCCCccccccccCCCcceeecCCCcHHHH
Confidence 999875100 1288999999998 4433 234556677888888899876531 111 1101 1123
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 006697 226 DDFTAWRELVWPELDQLL 243 (635)
Q Consensus 226 ~~f~~W~~~l~~~L~~~~ 243 (635)
+....|.+.+...+.++.
T Consensus 152 ~~~~~~g~~la~~~~~~~ 169 (188)
T 2ark_A 152 EACRRLGRRLAEWVAIFV 169 (188)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 455577777777766543
No 56
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.48 E-value=1.5e-14 Score=146.90 Aligned_cols=141 Identities=16% Similarity=0.105 Sum_probs=104.7
Q ss_pred CChhhHHHHhcCC----CCccccccCCCCCCCCCeEEEEEEEEEecCCCCCcccCccchHHhhcCCCCCCCCccEEEEEe
Q 006697 456 PPIGVFFAAVAPH----LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFI 531 (635)
Q Consensus 456 ~p~~~ll~~~~p~----l~pR~YSIsSsp~~~~~~i~ltv~~v~~~~~~g~~~~G~~S~~L~~l~~g~~~~~~~~v~i~~ 531 (635)
..+||++.+.+|. ...|+|||+|.+. +.++|.++++. . .|.+|+||+++++| +.|.|.+
T Consensus 39 ~~pGQ~v~l~~~~~~~~~~~R~YSi~~~~~---~~~~i~~~~~~--~------~G~~S~~l~~l~~G------d~l~v~g 101 (252)
T 2gpj_A 39 DQESAYIKLLFPQAGERPLMRTYTIRQQRD---DEIDVDFVLHD--T------DGPASSWAKTAQVG------ELIQIGG 101 (252)
T ss_dssp CCTTCEEEEEECCTTSCCEEEEEECCEEET---TEEEEEEECCS--S------CCHHHHHHHHCCTT------CEEEEEE
T ss_pred CCCCCeEEEEcccCCCCCCCCceeeeccCC---CEEEEEEEEeC--C------CCcHHHHHhhCCCC------CEEEEec
Confidence 3689999987663 4679999999763 56777776531 0 38999999999999 9999999
Q ss_pred eCCCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCccEEEE
Q 006697 532 RPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELIL 611 (635)
Q Consensus 532 ~~g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~~~l~~ 611 (635)
|.|.|.++.+ .++++|||+||||||+++|+++... ..++++|+++|+.+ |.++ |. ....++++.
T Consensus 102 P~G~f~l~~~-~~~~lliagGtGitPi~s~l~~l~~-------~~~~~~~~~~~~~~-d~~~---l~----~~~~~~v~~ 165 (252)
T 2gpj_A 102 PGLKKLINFE-ADWFLLAGDMTALPAISVNLAKLPN-------NAVGYAVIEVLSEA-DIQP---LV----HPEHVELHW 165 (252)
T ss_dssp EECCCCCCSS-SSEEEEEEEGGGHHHHHHHHHHSCT-------TCEEEEEEEESSGG-GCCC---CC----CCTEEEEEE
T ss_pred CCCCCcCCCC-CceEEEEcchhhHHHHHHHHHhCCC-------CCcEEEEEEECCHH-Hhhc---cc----CCCCcEEEE
Confidence 9999999754 4799999999999999999998632 24778999999877 6543 21 223456666
Q ss_pred EEecCCCC-cccchhHHhc
Q 006697 612 AFSREGSQ-KEYVQHKMMD 629 (635)
Q Consensus 612 a~SR~~~~-k~yVQd~l~~ 629 (635)
+++.+... ...+++.+.+
T Consensus 166 ~~~~~~~~~g~~~~~~l~~ 184 (252)
T 2gpj_A 166 VINPEADPEGRPLVERIAQ 184 (252)
T ss_dssp EECSSCCTTCHHHHHHHTT
T ss_pred EeCCCCCcccHHHHHHHHh
Confidence 66554322 3356766654
No 57
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=99.47 E-value=4.8e-13 Score=130.13 Aligned_cols=129 Identities=15% Similarity=0.017 Sum_probs=103.4
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCch-------------HHHhhhccCCeEEEEEecC
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDE-------------QYEEKLKKETLAFFMVATY 149 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~-------------~~~~~l~~~~~vif~~sTy 149 (635)
+++|+|+|+|.+|||+.+|+.|++.+.+. |++++++++.+...... ....++.+++.+||++|||
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~--g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y 82 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQG--GFEARVRTVPAVSTECEAVAPDIPAEGALYATLEDLKNCAGLALGSPTR 82 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHT--TCEEEEEBCCCEEC-------------CCBCCHHHHHTCSEEEEEEECB
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhC--CCEEEEEEhhhccchhhhhccccccccCchhhHHHHHHCCEEEEEcChh
Confidence 57999999999999999999999999987 88999999987421100 0145588999999999999
Q ss_pred CCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecc
Q 006697 150 GDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPL 215 (635)
Q Consensus 150 g~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~ 215 (635)
.|.+|..++.|++++..... ...++++++++|+.+...++.++.+...+.+.|..+|++.+.+.
T Consensus 83 -~~~~~~~lk~~ld~~~~~~~-~~~l~~K~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 146 (200)
T 2a5l_A 83 -FGNMASPLKYFLDGTSSLWL-TGSLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVLGIP 146 (200)
T ss_dssp -TTBCCHHHHHHHHTCHHHHH-HTTTTTCEEEEEEEBSCSSCCHHHHHHHHHHHHHHTTCEECCCC
T ss_pred -ccCccHHHHHHHHHHHHHhh-ccccCCCEEEEEEecCCCCCCHHHHHHHHHHHHHHCCCEEECCC
Confidence 68899999999998854200 01278999999999877766667788899999999999887643
No 58
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=99.40 E-value=2.3e-12 Score=125.12 Aligned_cols=127 Identities=18% Similarity=0.056 Sum_probs=99.4
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHh-hhCCceEEEEeCCCCCcCch-------------HHHhhhccCCeEEEEEec
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKA-RYEKAAVKVVDLDDYAMDDE-------------QYEEKLKKETLAFFMVAT 148 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~-~~~g~~~~v~dl~~~~~~~~-------------~~~~~l~~~~~vif~~sT 148 (635)
+++|+|+|+|.+|||+.+|+.|++.+.+ . |++++++++.+...... .-..++.+++.+||++||
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~--g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~ 78 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVD--GAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPT 78 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTST--TCEEEEEECCCCSCHHHHHHTTCCCCCSCBCCGGGGGGCSEEEEEEEE
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcC--CCEEEEEEccccCchhhhhhcccccccCchhhHHHHHHCCEEEEEeCh
Confidence 4689999999999999999999999997 7 88999999987521110 004458899999999999
Q ss_pred CCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeec
Q 006697 149 YGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVP 214 (635)
Q Consensus 149 yg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~ 214 (635)
| .|.+|..++.|++++..... ...++++++++|+.+... +......+.+...|..+|+..+.+
T Consensus 79 y-~~~~~~~lk~~ld~~~~~~~-~~~l~~K~~~~~~t~g~~-g~~~~~l~~l~~~l~~~g~~~v~~ 141 (198)
T 3b6i_A 79 R-FGNMSGQMRTFLDQTGGLWA-SGALYGKLASVFSSTGTG-GGQEQTITSTWTTLAHHGMVIVPI 141 (198)
T ss_dssp E-TTEECHHHHHHHTTCHHHHH-HTTTTTCEEEEEEEESSS-TTHHHHHHHHHHHHHHTTCEECCC
T ss_pred h-cCCchHHHHHHHHHhhhhhh-hcccCCCEEEEEEeCCCC-ccHHHHHHHHHHHHHHCCcEEECC
Confidence 9 89999999999998753200 012789999999987654 445567788888999999987753
No 59
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.39 E-value=1.5e-12 Score=140.23 Aligned_cols=145 Identities=17% Similarity=0.062 Sum_probs=112.4
Q ss_pred CCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHH
Q 006697 82 GKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARF 161 (635)
Q Consensus 82 ~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F 161 (635)
..++++|+|+|+||||+++|+.|++.+.+. |++++++++.+.+..+ +..++.+++.+||++|||+ |.+|..++.|
T Consensus 255 ~~~k~~i~~~S~~gnT~~la~~i~~~l~~~--g~~v~~~~~~~~~~~~--~~~~l~~~d~iiigsP~y~-~~~~~~~k~~ 329 (404)
T 2ohh_A 255 VDERVTVIYDTMHGSTRKMAHAIAEGAMSE--GVDVRVYCLHEDDRSE--IVKDILESGAIALGAPTIY-DEPYPSVGDL 329 (404)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHHHTT--TCEEEEEETTTSCHHH--HHHHHHTCSEEEEECCEET-TEECTHHHHH
T ss_pred CCCcEEEEEECCChHHHHHHHHHHHHHHhC--CCeEEEEECCCCCHHH--HHHHHHHCCEEEEECcccc-ccchHHHHHH
Confidence 568999999999999999999999999877 8899999999887654 5556889999999999995 5556679999
Q ss_pred HHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCC--CchHHHHHHHHHHHHH
Q 006697 162 YKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQ--CIEDDFTAWRELVWPE 238 (635)
Q Consensus 162 ~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~--~~e~~f~~W~~~l~~~ 238 (635)
++++...... . ++++++++||+|+.. +.+.+.+.+.|+.+|++.+.+ ....... ...+.+.+|.+++...
T Consensus 330 ld~l~~~~~~-~-l~~k~~~~~~~~g~~----~~a~~~l~~~l~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (404)
T 2ohh_A 330 LMYLRGLKFN-R-TLTRKALVFGSMGGN----GGATGTMKELLAEAGFDVACE-EEVYYVPTGDELDACFEAGRKLAAE 401 (404)
T ss_dssp HHHHHHHCGG-G-TCCEEEEEEEEESSS----CCHHHHHHHHHHHTTEEEEEE-EEEESSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhcccc-c-cCCCEEEEEEecCCC----ChhHHHHHHHHHHCCCEEEeE-EEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 9999753311 1 589999999976543 667889999999999998876 3332221 2334555666655443
No 60
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.38 E-value=1.2e-12 Score=141.99 Aligned_cols=145 Identities=12% Similarity=-0.016 Sum_probs=112.4
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHHH
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFY 162 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~ 162 (635)
+++|+|+|+|+||||+++|+.|++.+.+. |++++++++.+.+..+ +..++.+++.+||++||| .|.+|..++.|+
T Consensus 256 ~~kv~iiy~S~~GnT~~la~~i~~~l~~~--g~~v~~~~l~~~~~~~--~~~~l~~~D~iiigsP~y-~~~~~~~~k~fl 330 (414)
T 2q9u_A 256 QKKVTVVLDSMYGTTHRMALALLDGARST--GCETVLLEMTSSDITK--VALHTYDSGAVAFASPTL-NNTMMPSVAAAL 330 (414)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHT--TCEEEEEEGGGCCHHH--HHHHHHTCSEEEEECCCB-TTBCCHHHHHHH
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhC--CCeEEEEEcCcCCHHH--HHHHHHhCCEEEEEcCcc-CcCchHHHHHHH
Confidence 58999999999999999999999999887 8889999998876543 445688999999999999 555566699999
Q ss_pred HHHhcCCCCCCCC-CCceEEEEEecCcchhHHHHHHHHHHHHHHH-CCCEEeecc-eeecCCC--CchHHHHHHHHHHHH
Q 006697 163 KWFTEGNDRGPWL-QQLKFGVFGLGNRQYEHFNKIGIVLDEELCK-QGGARLVPL-GLGDDDQ--CIEDDFTAWRELVWP 237 (635)
Q Consensus 163 ~~L~~~~~~~~~l-~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~-lGa~~v~~~-g~gD~~~--~~e~~f~~W~~~l~~ 237 (635)
+++.... + +++++++||.|+. .+.+.+.+.+.|+. +|++.+.+. ..+.... ...+.+.+|.+++..
T Consensus 331 d~l~~~~-----~~~~K~~~~~~t~g~----~~~a~~~l~~~l~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~g~~l~~ 401 (414)
T 2q9u_A 331 NYVRGLT-----LIKGKPAFAFGAFGW----SNRAVPDIVAELRDGCKADVYDEKGITFKFNYTEELLEQAYNAGVDLGK 401 (414)
T ss_dssp HHHHHHT-----TTTTSBEEEEEEESS----SCCHHHHHHHHHHHTSCCBCCCSSCEEEESCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhc-----ccCCCEEEEEEecCC----CchhHHHHHHHHHhhcCcEEccCccEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 9997533 6 7999999997644 35678899999999 999987654 2232221 233555666666666
Q ss_pred HHHH
Q 006697 238 ELDQ 241 (635)
Q Consensus 238 ~L~~ 241 (635)
.+.+
T Consensus 402 ~~~~ 405 (414)
T 2q9u_A 402 RAIA 405 (414)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 61
>3n3a_C Protein NRDI; ribonucleotide reductase, four-helix bundle, dimanganese CLU flavoprotein, oxidoreductase; HET: FMN; 1.99A {Escherichia coli} PDB: 3n39_C* 3n3b_C*
Probab=99.37 E-value=1.9e-12 Score=120.18 Aligned_cols=98 Identities=20% Similarity=0.418 Sum_probs=75.0
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCC----CCCCChhH
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYG----DGEPTDNA 158 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg----~G~~p~na 158 (635)
+|..+|+|+|.||||++|+++|... . .++ ++.+ .++ +..++.+|+++|||| .|+.|+.+
T Consensus 20 ~~~~ivYfsS~TGNT~rFv~kL~~~------~--~~I-~~~~--~~~------~~~~ep~vlv~PTYg~g~~~G~vP~~v 82 (153)
T 3n3a_C 20 HMSQLVYFSSSSENTQRFIERLGLP------A--VRI-PLNE--RER------IQVDEPYILIVPSYGGGGTAGAVPRQV 82 (153)
T ss_dssp ---CEEECCCTTCHHHHHHHHHCSC------C--EEC-CSST--TCC------CCCCSCEEEEEECCTTSSSSSSSCHHH
T ss_pred cceeEEEEECCCcCHHHHHHHhCCc------c--ccc-cccc--Ccc------cccCCCEEEEEeccCCCCcCCcCcHHH
Confidence 4556899999999999999988431 1 222 3331 122 456678999999999 59999999
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEEEecCcch-hHHHHHHHHHHHHHH
Q 006697 159 ARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQY-EHFNKIGIVLDEELC 205 (635)
Q Consensus 159 ~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y-~~f~~~~k~ld~~L~ 205 (635)
.+|++.+.+ .++.++|+|.||++| +.||.+++.+.+.+.
T Consensus 83 ~dFl~~~~n--------~~~~~gVigsGN~nfg~~Fc~A~d~ia~k~~ 122 (153)
T 3n3a_C 83 IRFLNDEHN--------RALLRGVIASGNRNFGEAYGRAGDVIARKCG 122 (153)
T ss_dssp HHHHTSHHH--------HHHEEEEEEEECGGGGGGTTHHHHHHHHHHT
T ss_pred HHHHhhhcc--------cCcEEEEEecCCCchhHHHHHHHHHHHHHhC
Confidence 999876543 357899999999998 999999999999985
No 62
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=99.36 E-value=7.3e-12 Score=123.19 Aligned_cols=127 Identities=17% Similarity=0.126 Sum_probs=103.3
Q ss_pred CCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCC--------------------Cc-CchHHHhhhccCC
Q 006697 82 GKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDY--------------------AM-DDEQYEEKLKKET 140 (635)
Q Consensus 82 ~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~--------------------~~-~~~~~~~~l~~~~ 140 (635)
.+++|+|+|+|.+|||+.+|+.|++.+.+. |++++++++.+. +. .. ...++..++
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~--g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~l~~aD 80 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAA--GAEVRLLKVRETAPQDVIDGQDAWKANIEAMKDVPEA--TPADLEWAE 80 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHT--TCEEEEEECCCCSCHHHHTTCHHHHHHHHHTTTSCBC--CHHHHHHCS
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcC--CCEEEEEeccccccchhhhcccccccccccccchhHH--HHHHHHHCC
Confidence 468999999999999999999999999987 889999999875 21 12 355688999
Q ss_pred eEEEEEecCCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeec
Q 006697 141 LAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVP 214 (635)
Q Consensus 141 ~vif~~sTyg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~ 214 (635)
.+||++|+| .|.+|..++.|++++...- ....++++++++|+.+...++....+...+...|..+|+..+.+
T Consensus 81 ~ii~gsP~y-~~~~~~~lk~~ld~~~~~~-~~~~l~gK~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~v~~ 152 (211)
T 1ydg_A 81 AIVFSSPTR-FGGATSQMRAFIDTLGGLW-SSGKLANKTFSAMTSAQNVNGGQETTLQTLYMTAMHWGAVLTPP 152 (211)
T ss_dssp EEEEEEEEE-TTEECHHHHHHHHTTHHHH-HTTTTTTCEEEEEEEESSTTSSTTHHHHHHHHHHHTTTCEECCC
T ss_pred EEEEEcCcc-ccCccHHHHHHHHHhcccc-ccccCCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHCCCEEeCC
Confidence 999999999 6999999999999875310 00128899999999876665445677889999999999988764
No 63
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=99.36 E-value=6.9e-12 Score=122.00 Aligned_cols=126 Identities=12% Similarity=0.029 Sum_probs=100.0
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcC---------------chHHHhhhccCCeEEEEEe
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMD---------------DEQYEEKLKKETLAFFMVA 147 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~---------------~~~~~~~l~~~~~vif~~s 147 (635)
+++|+|+|+| +|||+.+|+.+++.+.+. |++++++++.+. .. ......++.+++.+||++|
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~--g~~v~~~~l~~~-~~~~~~~~~~~~~~d~~~~~~~~~l~~aD~ii~gsP 79 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEA--GAEVKIRRVRET-LPPEFQSRIPFDKVKDIPEVTLDDMRWADGFAIGSP 79 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHH--SCEEEEEECCCC-SCGGGGTTCCGGGSTTSCBCCHHHHHHCSEEEEEEE
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhC--CCEEEEEehhHh-CChhhhhccCCCcccccccccHHHHHhCCEEEEECC
Confidence 5799999999 999999999999999987 889999999876 10 0001456888999999999
Q ss_pred cCCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeec
Q 006697 148 TYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVP 214 (635)
Q Consensus 148 Tyg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~ 214 (635)
+| .|.+|..++.|++++...- ....++++++++|+.+...++....+.+.+.+.|..+|+..+..
T Consensus 80 ~y-~~~~~~~lk~~ld~~~~~~-~~~~l~gK~~~~~~t~g~~~~g~~~~~~~l~~~l~~~g~~~~~~ 144 (199)
T 2zki_A 80 TR-YGNMAGGLKTFLDTTAILW-KDNVLYGKPVTFFTEASTVHGGHETTILTMSTYAYHFGMIIVPI 144 (199)
T ss_dssp CB-TTBCCHHHHHHHHTTHHHH-HTTSSTTCEEEEEEEBSSTTSSSSHHHHHHTHHHHHHTCEECCC
T ss_pred cc-ccCccHHHHHHHHHhhhcc-cccccCCCEEEEEEeCCCCCCCHHHHHHHHHHHHHHCCeEEeCC
Confidence 99 6899999999999874310 00128899999999876655444667788999999999987754
No 64
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=99.27 E-value=3.2e-11 Score=117.28 Aligned_cols=122 Identities=20% Similarity=0.139 Sum_probs=94.8
Q ss_pred CCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCC-CcCchHHHhhhccCCeEEEEEecCCCCCCChhHHH
Q 006697 82 GKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDY-AMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAAR 160 (635)
Q Consensus 82 ~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~-~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~ 160 (635)
.+++|+|+|+|.||||+++|+.|++.+.+. + +++.++ +.. +....++.+++.+||++||| .|.+|..++.
T Consensus 5 ~~~kiliiy~S~~GnT~~lA~~ia~~l~~~--~-----~~v~~~~~~~-~~~~~~l~~~D~ii~gsP~y-~g~~~~~~k~ 75 (193)
T 3d7n_A 5 SSSNTVVVYHSGYGHTHRMAEAVAEGAEAT--L-----HAIDAEGNLS-EDGWAALDAADAIIFGTPTY-MGGPSWQFKK 75 (193)
T ss_dssp -CCCEEEEECCSSSHHHHHHHHHHHHHTCE--E-----EECCTTSCCC-HHHHHHHHHCSEEEEEEEEE-TTEECHHHHH
T ss_pred CCCEEEEEEECCChHHHHHHHHHHHHhhhc--c-----eEeeecCCCC-HhHHHHHHHCCEEEEEeCcc-CCCccHHHHH
Confidence 367899999999999999999999999754 2 344443 111 11345688999999999999 5899999999
Q ss_pred HHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEee
Q 006697 161 FYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLV 213 (635)
Q Consensus 161 F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~ 213 (635)
|++++...- ....++++++++|+.+.+.++.+..+...+...|..+|+..+.
T Consensus 76 fld~~~~~~-~~~~l~gK~~~~f~s~g~~~g~~~~~l~~l~~~l~~~G~~~vg 127 (193)
T 3d7n_A 76 FADASSKPW-FSAKWQDKVFGGFTNSASLNGDKLNTLQYLVLLAGQHGGLWVS 127 (193)
T ss_dssp HHHHTHHHH-HTTTTTTCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEECC
T ss_pred HHHHhhhhc-cccccCCCEEEEEEECCCCCCChHHHHHHHHHHHHHCCCEEeC
Confidence 999986200 0012889999999998777766778889999999999988654
No 65
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=99.26 E-value=6.4e-11 Score=115.48 Aligned_cols=123 Identities=11% Similarity=0.071 Sum_probs=98.8
Q ss_pred CCeEEEEEECC--CchHHHHHHHHHHH-HHhhhCCceEEEEeCCCCCcC-----------chHHHhhhccCCeEEEEEec
Q 006697 83 KTKVTVFYGTQ--TGTAEGFAKALAEE-IKARYEKAAVKVVDLDDYAMD-----------DEQYEEKLKKETLAFFMVAT 148 (635)
Q Consensus 83 ~~~v~I~YgSq--tGtte~~A~~l~~~-l~~~~~g~~~~v~dl~~~~~~-----------~~~~~~~l~~~~~vif~~sT 148 (635)
+|+|+|+|||. +|+|+.+|+.+++. +.++ |++++++|+.+++.. -..+..++..++.+||++|+
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~--g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~i~~aD~ii~~sP~ 79 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARS--DSQGRHIHVIDLDPKALLRGDLSNAKLKEAVDATCNADGLIVATPI 79 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHS--SEEEEEEEGGGSCHHHHHHTCTTSHHHHHHHHHHHHCSEEEEEEEC
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHC--CCeEEEEEccccCchhhcccccCcHHHHHHHHHHHHCCEEEEEeCc
Confidence 46899999998 79999999999999 9887 888999999887431 11234567889999999999
Q ss_pred CCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeec
Q 006697 149 YGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVP 214 (635)
Q Consensus 149 yg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~ 214 (635)
| .|.+|..++.|++|+.... ++++++++|+.|... .+++.....+...|..+|++.+.+
T Consensus 80 y-~~~~p~~lK~~ld~l~~~~-----~~gK~~~~~~tgg~~-~~~~a~~~~l~~~l~~~g~~~v~~ 138 (197)
T 2vzf_A 80 Y-KASYTGLLKAFLDILPQFA-----LAGKAALPLATGGSP-AHVLALDYGLRPVLHSMGVRHVVQ 138 (197)
T ss_dssp B-TTBCCHHHHHHHTTSCTTT-----TTTCEEEEEEEESSG-GGGGHHHHTHHHHHHTTTCSEECC
T ss_pred c-CCCCCHHHHHHHHhccccc-----cCCCEEEEEEECCCc-chhhHHHHHHHHHHHHcCCEeccc
Confidence 9 6889999999999986432 889999999997654 333433346889999999988754
No 66
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=99.25 E-value=2.7e-11 Score=114.68 Aligned_cols=133 Identities=17% Similarity=0.085 Sum_probs=90.2
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCc-----------------------hHHHhhhccC
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDD-----------------------EQYEEKLKKE 139 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~-----------------------~~~~~~l~~~ 139 (635)
+++++|+|.|+||||+++|+.|++.+... . .++.+...|..++ .....++.++
T Consensus 4 ~~kilIvY~S~tG~T~~vA~~Ia~~l~~~--~--~~i~~~~~y~~~~l~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~~y 79 (162)
T 3klb_A 4 DRKILVAYFSCSGVTKAVAEKLAAITGAD--L--YEIKPEVPYTEADLDWNDKKSRSSVEMRDALSRPAISGTLFHPEKY 79 (162)
T ss_dssp GSCEEEEECCSSSHHHHHHHHHHHHHTCE--E--EECCBSSCCCTGGGCTTCTTSHHHHHHTCTTCCCCBSCCCSCGGGC
T ss_pred CCCEEEEEECCCchHHHHHHHHHHHhCCC--e--EEEEeCCcCCccccchhhHHHHHHHHHhccccCccccccccChhhC
Confidence 46899999999999999999999988532 1 1222222221100 0012237789
Q ss_pred CeEEEEEecCCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEe-cCcchhHHHHHHHHHHHHHHHCCCEEeecceee
Q 006697 140 TLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGL-GNRQYEHFNKIGIVLDEELCKQGGARLVPLGLG 218 (635)
Q Consensus 140 ~~vif~~sTyg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGl-Gds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~g 218 (635)
+.+||++||| .|.+|..+..|++.+ . ++++++++|+. |++.+ ..+.+.+.+.|. |++.+ +-...
T Consensus 80 d~iilG~P~~-~g~~~~~~~~fl~~~---~-----l~gk~v~~f~t~g~~~~---g~~~~~l~~~l~--~~~~~-~g~~~ 144 (162)
T 3klb_A 80 EVLFVGFPVW-WYIAPTIINTFLESY---D-----FAGKIVVPFATSGGSGI---GNCEKNLHKAYP--DIVWK-DGKLL 144 (162)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHTS---C-----CTTCEEEEEEECSSCCS---HHHHHHHHHHCT--TSEEC-CCEEC
T ss_pred CEEEEEcccc-cCCCCHHHHHHHHhc---C-----CCCCEEEEEEEeCCCCc---cHHHHHHHHHcC--CCEee-cceEE
Confidence 9999999999 689898888787654 2 88999999996 43333 456777877775 66654 32222
Q ss_pred cCCCCchHHHHHHHHHH
Q 006697 219 DDDQCIEDDFTAWRELV 235 (635)
Q Consensus 219 D~~~~~e~~f~~W~~~l 235 (635)
. +...++++.+|.+++
T Consensus 145 ~-g~~~~~~v~~W~~~~ 160 (162)
T 3klb_A 145 N-GQITRDLVTEWFEKI 160 (162)
T ss_dssp C-SCCCHHHHHHHHHHT
T ss_pred e-CCCCHHHHHHHHHHh
Confidence 2 234689999998764
No 67
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=99.24 E-value=6.4e-11 Score=113.19 Aligned_cols=135 Identities=16% Similarity=0.154 Sum_probs=91.2
Q ss_pred cCCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCch-----------------------HHHhhhc
Q 006697 81 AGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDE-----------------------QYEEKLK 137 (635)
Q Consensus 81 ~~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~-----------------------~~~~~l~ 137 (635)
..+|+++|+|.|.||||+++|+.|++.+... -+++.+...|...+. ....++.
T Consensus 11 ~~~mkilIvY~S~tGnT~~vA~~Ia~~l~~d----~~~I~~~~~y~~~~~~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~ 86 (171)
T 4ici_A 11 HSNSKILVAYFSATGTTARAAEKLGAAVGGD----LYPIAPAQPYTSADLDWNNKRSRSSVEMNDPKMRPAIKSKKENIG 86 (171)
T ss_dssp --CCCEEEEECCSSSHHHHHHHHHHHHHTCE----EEECCBSSCCCTGGGCTTCTTSHHHHHHHCTTCCCCBSCCCTTGG
T ss_pred cCCCCEEEEEECCCChHHHHHHHHHHHhCCC----eEEEeeCCCCCccccchhhHhHHHHHHHhcccCCcccccccccHh
Confidence 3478999999999999999999999998422 122223222221000 0013477
Q ss_pred cCCeEEEEEecCCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeeccee
Q 006697 138 KETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGL 217 (635)
Q Consensus 138 ~~~~vif~~sTyg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~ 217 (635)
.++.+||++||| .|.+|..+..|++.+ . ++++++++|+.+... .++.+.+.+.+.|. |++.. +-..
T Consensus 87 ~yD~iilg~Pvy-~g~~~~~~~~fl~~~---~-----l~gk~v~~f~t~g~~--~~g~a~~~l~~~l~--~~~~~-~g~~ 152 (171)
T 4ici_A 87 TYDVVFIGYPIW-WDLAPRIINTFIEGH---S-----LKGKTVVPFATSGGS--SIGNSATVLKKTYP--DLNWK-EGRL 152 (171)
T ss_dssp GCSEEEEEEECB-TTBCCHHHHHHHHHS---C-----CTTSEEEEEEECSSC--CSHHHHHHHHHHST--TSEEC-CCEE
T ss_pred HCCEEEEecccc-cCCchHHHHHHHHHc---C-----CCcCEEEEEEecCCC--CcchHHHHHHHHcC--CCeec-cCeE
Confidence 899999999999 588888888888776 2 789999999963221 23567778887775 55543 3333
Q ss_pred ecCCCCchHHHHHHHHHH
Q 006697 218 GDDDQCIEDDFTAWRELV 235 (635)
Q Consensus 218 gD~~~~~e~~f~~W~~~l 235 (635)
... ..++++..|.+++
T Consensus 153 ~~~--~~~~~i~~Wl~~~ 168 (171)
T 4ici_A 153 LNR--TDEKAIRAWLDVI 168 (171)
T ss_dssp CSS--CCHHHHHHHHHHH
T ss_pred ecC--CCHHHHHHHHHHh
Confidence 332 3578899998765
No 68
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.23 E-value=2.8e-12 Score=122.87 Aligned_cols=89 Identities=16% Similarity=0.233 Sum_probs=70.7
Q ss_pred EEEeeCCCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhc---CCCCCcEEEEEeecCCCcccc-cHHHHHHHHHc
Q 006697 528 PIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQD---GAQLGPALLFFGCRNRRMDFI-YEDELNNFEEE 603 (635)
Q Consensus 528 ~i~~~~g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~---g~~~~~~~LffG~R~~~~d~l-y~del~~~~~~ 603 (635)
.|.+|.|.|.++....+|+||||+|||||||++|++++.....+ +....+++|+||+|+.+ +++ |.+||+++.+.
T Consensus 2 ~v~GP~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~~~~~~~~~v~l~~~~r~~~-~~~w~~~~l~~l~~~ 80 (186)
T 3a1f_A 2 AVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTH-AFEWFADLLQLLESQ 80 (186)
T ss_dssp CTTSTTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEEESCTT-TTHHHHHHHHHHHHH
T ss_pred eEECCCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhcccCCCCcEEEEEEEECCcc-hHHHHHHHHHHHHHH
Confidence 35678998876544567999999999999999999998764321 12457899999999998 887 99999999876
Q ss_pred ------CCccEEEEEEecCC
Q 006697 604 ------GVISELILAFSREG 617 (635)
Q Consensus 604 ------g~~~~l~~a~SR~~ 617 (635)
..++++++.+||+.
T Consensus 81 ~~~~~~~~~~~~~~~~t~~~ 100 (186)
T 3a1f_A 81 MQERNNAGFLSYNIYLTGWD 100 (186)
T ss_dssp HHHTTCTTSEEEEEEETTC-
T ss_pred HhhccCCCeEEEEEEEcCCC
Confidence 33678899999863
No 69
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=99.13 E-value=9e-10 Score=106.82 Aligned_cols=158 Identities=10% Similarity=0.034 Sum_probs=116.0
Q ss_pred CCeEEEEEECCC---chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcC---------------------------chHH
Q 006697 83 KTKVTVFYGTQT---GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMD---------------------------DEQY 132 (635)
Q Consensus 83 ~~~v~I~YgSqt---Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~---------------------------~~~~ 132 (635)
+|+|+|+|||.+ |+|+.+|+.+++.+.++.++.+++++|+.+.+.. -..+
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 80 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLAANPVPVLDGELVGAMRPGDAPLTPRQQDALALSDEL 80 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETTTSCCCCCCHHHHHHTC--CCCCCHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCCCCCCHHHHHhhcCCcccCCHHHHHHHHHHHHH
Confidence 478999999998 9999999999999998721388999999875421 0124
Q ss_pred HhhhccCCeEEEEEecCCCCCCChhHHHHHHHHhcCCC--------CCCCCCCceEEEEEecCcchhH--HHHHHHHHHH
Q 006697 133 EEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGND--------RGPWLQQLKFGVFGLGNRQYEH--FNKIGIVLDE 202 (635)
Q Consensus 133 ~~~l~~~~~vif~~sTyg~G~~p~na~~F~~~L~~~~~--------~~~~l~~~~~aVFGlGds~Y~~--f~~~~k~ld~ 202 (635)
..++..++.+||++|+| .+.+|...+.|++++..... ....++++++++|+.+...|++ |+.+...+..
T Consensus 81 ~~~l~~aD~iv~~~P~y-~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~~l~~ 159 (201)
T 1t5b_A 81 IAELKAHDVIVIAAPMY-NFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIHKDTPTDLIAPYLKV 159 (201)
T ss_dssp HHHHHHCSEEEEECCCB-TTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEECSSCCTTSTTCCHHHHHHH
T ss_pred HHHHHhCCEEEEEeCcc-cCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEecCCCCCCCchhhHHHHHHH
Confidence 56688899999999999 77889999999999863110 0123889999999986666643 5557777888
Q ss_pred HHHHCCCEEeecceeecCCCCchHHHHHHHHHHHHHHHHh
Q 006697 203 ELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQL 242 (635)
Q Consensus 203 ~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~ 242 (635)
.|..+|++.+.......... .++..++|.++..+.+.++
T Consensus 160 ~l~~~G~~~~~~~~~~~~~~-~~~~~~~~l~~a~~~~~~~ 198 (201)
T 1t5b_A 160 FLGFIGITDVNFVFAEGIAY-GPEVAAKAQADAKAAIDSV 198 (201)
T ss_dssp HHHHTTCCCEEEEEECCGGG-CHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCcceeEEEEEecccC-ChHHHHHHHHHHHHHHHHH
Confidence 99999998765443322222 3455578887776666543
No 70
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.10 E-value=6e-11 Score=109.89 Aligned_cols=91 Identities=9% Similarity=-0.048 Sum_probs=65.4
Q ss_pred EEEEeeCCCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHcCCc
Q 006697 527 APIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVI 606 (635)
Q Consensus 527 v~i~~~~g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~g~~ 606 (635)
+.|.+|.|+|.... ..++++|||+||||||+++++++... + ..++.|+ |+|+++ |.+|++||++++.+
T Consensus 3 ~~v~GP~G~~~~~~-~~~~~llIaGG~GiaPl~sm~~~l~~---~---~~~v~l~-g~R~~~-~~~~~~el~~l~~~--- 70 (142)
T 3lyu_A 3 LNVAGPLGTPVPME-KFGKILAIGAYTGIVEVYPIAKAWQE---I---GNDVTTL-HVTFEP-MVILKEELEKAVTR--- 70 (142)
T ss_dssp ----CCCSCCBCCC-CCSEEEEEEETTHHHHHHHHHHHHHH---T---TCEEEEE-EEEEGG-GCCSHHHHHTTSSE---
T ss_pred eeeeCCCCCCccCC-CCCeEEEEECcCcHHHHHHHHHHHHh---c---CCcEEEE-EeCCHH-HhhHHHHHHHHHhh---
Confidence 46889999776553 36799999999999999999998764 2 2479999 999999 99999999987542
Q ss_pred cEEEEEEecCCC--------CcccchhHHhc
Q 006697 607 SELILAFSREGS--------QKEYVQHKMMD 629 (635)
Q Consensus 607 ~~l~~a~SR~~~--------~k~yVQd~l~~ 629 (635)
..+..+++++.. .+++|++.+.+
T Consensus 71 ~~~~~~~~~~~~~~~d~~~g~~G~v~~~l~~ 101 (142)
T 3lyu_A 71 HIVEPVPLNPNQDFLANMKNVSQRLKEKVRE 101 (142)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeecccccCCCCCCCCCccchhHHHHH
Confidence 233334444321 35788877654
No 71
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.10 E-value=6.2e-11 Score=111.79 Aligned_cols=93 Identities=10% Similarity=-0.024 Sum_probs=64.0
Q ss_pred cE-EEEEeeCCCCcCCCCCCCcEEEEecCCCchhHHHHHHHHHHHHhcCCCCCcEEEEEeecCCCcccccHHHHHHHHHc
Q 006697 525 SW-APIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEE 603 (635)
Q Consensus 525 ~~-v~i~~~~g~F~lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~g~~~~~~~LffG~R~~~~d~ly~del~~~~~~ 603 (635)
+. +.|.+|.|+|.... ..+|++|||+||||||+++++++... ++ .+++|+ |+|+++ |.+|.+||++++.+
T Consensus 5 d~vl~v~gP~G~~f~~~-~~~~~llIaGG~GItPl~sm~~~l~~---~~---~~v~l~-g~r~~~-d~~~~~el~~l~~~ 75 (158)
T 3lrx_A 5 DSLLNVAGPLGTPVPME-KFGKILAIGAYTGIVEVYPIAKAWQE---IG---NDVTTL-HVTFEP-MVILKEELEKAVTR 75 (158)
T ss_dssp -------CCCCCCBCCC-CCSEEEEEEETTHHHHHHHHHHHHHH---HT---CEEEEE-EECBGG-GCCSHHHHHHHSSE
T ss_pred CEeeEEECCCCCCCccC-CCCeEEEEEccCcHHHHHHHHHHHHh---cC---CcEEEE-EeCCHH-HhhHHHHHHHHHhc
Confidence 89 59999999754332 46899999999999999999999764 22 489999 999999 99999999998642
Q ss_pred CCccEEEEEEecCC------C--CcccchhHHhc
Q 006697 604 GVISELILAFSREG------S--QKEYVQHKMMD 629 (635)
Q Consensus 604 g~~~~l~~a~SR~~------~--~k~yVQd~l~~ 629 (635)
..+..+++++. + .+++|++.+.+
T Consensus 76 ---~~~~~v~~~~~~~~~~~~~g~~G~v~~~l~~ 106 (158)
T 3lrx_A 76 ---HIVEPVPLNPNQDFLANMKNVSQRLKEKVRE 106 (158)
T ss_dssp ---EEECCBCCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ---eEEEEeeccccccCCCCCCCCcccccHHHHH
Confidence 22222233321 1 35788876653
No 72
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=99.09 E-value=5.6e-10 Score=104.22 Aligned_cols=126 Identities=15% Similarity=0.206 Sum_probs=85.6
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCC-ceEEEEeCC-CCCcCc--------------------hHHHhhhccCC
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEK-AAVKVVDLD-DYAMDD--------------------EQYEEKLKKET 140 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g-~~~~v~dl~-~~~~~~--------------------~~~~~~l~~~~ 140 (635)
+++++|+|.|+||||+++|+.|++++... + +++++ .+ .|+.+. .....++..++
T Consensus 3 ~~kilIvY~S~tGnT~~iA~~Ia~~l~~~--~~~~i~~--~~~~~~~~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~~~d 78 (151)
T 3edo_A 3 AKKTLILYYSWSGETKKMAEKINSEIKDS--ELKEVKV--SEGTFDADXYKTSDIALDQIQGNKDFPEIQLDNIDYNNYD 78 (151)
T ss_dssp CCCEEEEECCSSSHHHHHHHHHHHHSTTC--EEEECBC--CTTSSCSSHHHHHHHHHHHHTTSSCCCCCBCCCCCGGGCS
T ss_pred CCcEEEEEECCCCcHHHHHHHHHHhccCC--CEEEEEc--CCCCCCchhhhhhHHHHHHHhcccCCcccchhhhCHhhCC
Confidence 35899999999999999999999988532 2 12221 11 121100 00122377899
Q ss_pred eEEEEEecCCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecC
Q 006697 141 LAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDD 220 (635)
Q Consensus 141 ~vif~~sTyg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~ 220 (635)
.+||++||| .|.+|..+..|++.+.. +.++.+++|+.|.+.+ +.+.+.+.+.|. +++.+. |..-
T Consensus 79 ~iilG~P~~-~g~~~~~~~~fl~~~~~-------~~~k~~~~~t~gg~~~---g~~~~~l~~~~~--~~~~~~--g~~~- 142 (151)
T 3edo_A 79 LILIGSPVW-SGYPATPIKTLLDQMKN-------YRGEVASFFTSAGTNH---KAYVSHFNEWAD--GLNVIG--VARD- 142 (151)
T ss_dssp EEEEEEEEE-TTEECTHHHHHHHHTTT-------CCSEEEEEEECSSCCH---HHHHHHHHHHTT--TSEEEE--EEET-
T ss_pred EEEEEccee-cccccHHHHHHHHhchh-------cCCEEEEEEEeCCCCC---CcHHHHHHHHcC--CCeeec--cccc-
Confidence 999999999 69999999999998753 6788999999766554 455677777775 444432 2221
Q ss_pred CCCchHHHHHHH
Q 006697 221 DQCIEDDFTAWR 232 (635)
Q Consensus 221 ~~~~e~~f~~W~ 232 (635)
+.++.+|.
T Consensus 143 ----~~~~~~w~ 150 (151)
T 3edo_A 143 ----DSEVDKWS 150 (151)
T ss_dssp ----TTTHHHHH
T ss_pred ----HHHHHHHh
Confidence 24688885
No 73
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=98.97 E-value=4.4e-09 Score=101.50 Aligned_cols=122 Identities=16% Similarity=0.155 Sum_probs=96.3
Q ss_pred CeEEEEEECCC--chHHHHHHHHHHHHHhhh----CCceEEEEeCCCCCc---------------------Cc--hHHHh
Q 006697 84 TKVTVFYGTQT--GTAEGFAKALAEEIKARY----EKAAVKVVDLDDYAM---------------------DD--EQYEE 134 (635)
Q Consensus 84 ~~v~I~YgSqt--Gtte~~A~~l~~~l~~~~----~g~~~~v~dl~~~~~---------------------~~--~~~~~ 134 (635)
|+|+|+|||.. |+|+.+|+.+.+.+.+.. +|++++++|+.+.+. ++ ..+..
T Consensus 1 Mkilii~gS~r~~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (191)
T 1t0i_A 1 MKVGIIMGSVRAKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSWSR 80 (191)
T ss_dssp CEEEEEECCCCSSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHHHCCCSSCCCCCSCGGGCCSGGGCSCHHHHHHHH
T ss_pred CeEEEEeCCCCCCCchHHHHHHHHHHHHHhhccCCCCceEEEEehhhcCCCCCCCccccccccccCcccCCcHHHHHHHH
Confidence 58999999998 999999999999998642 257888888765321 00 13456
Q ss_pred hhccCCeEEEEEecCCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeec
Q 006697 135 KLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVP 214 (635)
Q Consensus 135 ~l~~~~~vif~~sTyg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~ 214 (635)
++..++.+||++|+| .|.+|..++.|++++.. .++++++++|+.|... . ..+...+...|..+|++.+..
T Consensus 81 ~l~~aD~iI~~sP~y-~~~~p~~lK~~iD~~~~------~l~gK~~~~~~~G~~~-~--~~~~~~l~~~l~~~G~~~~~~ 150 (191)
T 1t0i_A 81 IVNALDIIVFVTPQY-NWGYPAALKNAIDRLYH------EWHGKPALVVSYGGHG-G--SKCNDQLQEVLHGLKMNVIGG 150 (191)
T ss_dssp HHHTCSEEEEEEECB-TTBCCHHHHHHHHTCST------TTTTCEEEEEEEETTT-T--HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhCCEEEEEeceE-CCCCCHHHHHHHHHHHh------hcCCCEEEEEEeCCcc-h--hhHHHHHHHHHHHCCCEEcce
Confidence 788999999999999 78889999999998864 2889999999988743 2 346678899999999987764
Q ss_pred c
Q 006697 215 L 215 (635)
Q Consensus 215 ~ 215 (635)
.
T Consensus 151 ~ 151 (191)
T 1t0i_A 151 V 151 (191)
T ss_dssp E
T ss_pred e
Confidence 3
No 74
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=98.96 E-value=1.3e-08 Score=102.38 Aligned_cols=153 Identities=12% Similarity=0.141 Sum_probs=112.0
Q ss_pred CCeEEEEEECCC--chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCc---------------------Cc-hHHHhhhcc
Q 006697 83 KTKVTVFYGTQT--GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAM---------------------DD-EQYEEKLKK 138 (635)
Q Consensus 83 ~~~v~I~YgSqt--Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~---------------------~~-~~~~~~l~~ 138 (635)
+|+|+|+|||.. |+|+.+|+.+++.+.+.. |.+++++|+.+.+. ++ ..+..++..
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~-g~~v~~~dl~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~~ 79 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRN-NVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLE 79 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHS-CCEEEEECTTTCCCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhc-CCeEEEEEcccCCCCCCCchHHhhccCCCCccchHHHHHHHHHHHHH
Confidence 478999999996 999999999999997653 57889999886532 11 234566788
Q ss_pred CCeEEEEEecCCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceee
Q 006697 139 ETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLG 218 (635)
Q Consensus 139 ~~~vif~~sTyg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~g 218 (635)
++.+||++|+| .|.+|..++.|++++.... ....++|+++++|+.+... ....+.+.+...|..+|++.+.+....
T Consensus 80 AD~iI~~sP~y-~~~~p~~lK~~iDr~~~~~-~~~~l~gK~~~~i~t~g~~--g~~~~~~~l~~~l~~~G~~~v~~~~~~ 155 (242)
T 1sqs_A 80 SDIIIISSPVY-LQNVSVDTKNFIERIGGWS-HLFRLAGKFVVTLDVAESN--GSDNVSEYLRDIFSYMGGQILHQVSIT 155 (242)
T ss_dssp CSEEEEEEEEC-SSSCCHHHHHHHHHTGGGT-TTTTTTTCEEEEEEEESSC--CSCCHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCEEEEEcccc-ccCCCHHHHHHHHHHHHhc-cccccCCCEEEEEEeCCCC--chhhHHHHHHHHHHHCCCeeeeEEEEe
Confidence 99999999999 8889999999999985321 1124899999999875322 123466788899999999987765443
Q ss_pred cC-CCCchHHHHHHHHHHHHHHH
Q 006697 219 DD-DQCIEDDFTAWRELVWPELD 240 (635)
Q Consensus 219 D~-~~~~e~~f~~W~~~l~~~L~ 240 (635)
+. .....+.+.++.+.+...+.
T Consensus 156 ~~~~~~~~~~~~~~~~~la~~i~ 178 (242)
T 1sqs_A 156 NSLKDIAEAQLMEATYKIEDVLE 178 (242)
T ss_dssp GGGGGGHHHHHHHHHHHHHHHHT
T ss_pred ccCChHHHHHHHHHHHHHHHHHh
Confidence 32 22345666667666665554
No 75
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=98.96 E-value=4.1e-09 Score=102.04 Aligned_cols=124 Identities=10% Similarity=0.160 Sum_probs=97.8
Q ss_pred CCeEEEEEECCC--chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCc------------hHHHhhhccCCeEEEEEec
Q 006697 83 KTKVTVFYGTQT--GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDD------------EQYEEKLKKETLAFFMVAT 148 (635)
Q Consensus 83 ~~~v~I~YgSqt--Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~------------~~~~~~l~~~~~vif~~sT 148 (635)
+|+|+|+|||.. |+|+.+|+.+++.+. . |.+++++|+.++..-+ ..+..++..++.+||++|+
T Consensus 6 ~Mkilii~gS~r~~g~t~~la~~i~~~l~-~--g~~v~~~dl~~~p~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~~sP~ 82 (193)
T 1rtt_A 6 DIKVLGISGSLRSGSYNSAALQEAIGLVP-P--GMSIELADISGIPLYNEDVYALGFPPAVERFREQIRAADALLFATPE 82 (193)
T ss_dssp -CEEEEEESCCSTTCHHHHHHHHHHTTCC-T--TCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHHCSEEEEECCE
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHhcc-C--CCeEEEEeHHHCCCCCccccccCCCHHHHHHHHHHHhCCEEEEEccc
Confidence 479999999985 999999999999987 5 7889999998743211 1245568889999999999
Q ss_pred CCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEee
Q 006697 149 YGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLV 213 (635)
Q Consensus 149 yg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~ 213 (635)
| .|.+|..++.|++++..... ..+++|++++|+.+...++ ...+...+...|..+|++.+.
T Consensus 83 y-~~~~p~~lK~~iD~~~~~~~--~~l~gK~~~~~~t~gg~~g-~~~~~~~l~~~l~~~g~~~~~ 143 (193)
T 1rtt_A 83 Y-NYSMAGVLKNAIDWASRPPE--QPFSGKPAAILGASAGRFG-TARAQYHLRQTLVFLDVHPLN 143 (193)
T ss_dssp E-TTEECHHHHHHHHHHTCSSS--CTTTTCEEEEEEECSSTTT-THHHHHHHHHHHHHHTCEECC
T ss_pred c-ccCcCHHHHHHHHHhccccC--cccCCCeEEEEEeCCCCCc-cHHHHHHHHHHHHHcCCEEcC
Confidence 9 77789999999999975311 2388999999998654443 234668888999999998876
No 76
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A*
Probab=98.95 E-value=9.6e-10 Score=104.83 Aligned_cols=145 Identities=10% Similarity=0.149 Sum_probs=100.3
Q ss_pred CeEEEEEECCC--chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCc-----C--------chHHHhhhccCCeEEEEEec
Q 006697 84 TKVTVFYGTQT--GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAM-----D--------DEQYEEKLKKETLAFFMVAT 148 (635)
Q Consensus 84 ~~v~I~YgSqt--Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~-----~--------~~~~~~~l~~~~~vif~~sT 148 (635)
|+|+|+|||.+ |+|+.+|+.+++.+.. +++++.+++. + -..+..++.+++.+||++|+
T Consensus 1 Mkilii~gS~~~~g~t~~la~~i~~~l~~-------~~i~l~~~~lp~~~~~~~~~~~~~~~~~~~~i~~aD~ii~~tP~ 73 (174)
T 3gfs_A 1 MNMLVINGTPRKHGRTRIAASYIAALYHT-------DLIDLSEFVLPVFNGEAEQSELLKVQELKQRVTKADAIVLLSPE 73 (174)
T ss_dssp --CEEEECCCCTTCHHHHHHHHHHHHTTC-------EEEETTTSCCCCCCCCHHHHTCHHHHHHHHHHHHCSSEEEEEEC
T ss_pred CEEEEEECCCCCCCcHHHHHHHHHHhCcc-------eEEeeecCCCCCCCChhhccCcHHHHHHHHHHHHCCEEEEEcCC
Confidence 57999999999 9999999999998753 3455554432 1 01234567889999999999
Q ss_pred CCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEe-cCcchhHHHHHHHHHHHHHHHCCCEEeecceee-----c-CC
Q 006697 149 YGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGL-GNRQYEHFNKIGIVLDEELCKQGGARLVPLGLG-----D-DD 221 (635)
Q Consensus 149 yg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGl-Gds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~g-----D-~~ 221 (635)
| +|.+|..++.|++|+.... ++||++++|+. |... .+..+.+.+...|..+|+..+.+.... | ++
T Consensus 74 y-~~~~p~~lk~~lD~l~~~~-----~~gK~~~~~~~sgg~~--g~~~a~~~l~~~l~~~g~~~v~~~v~i~~~~f~~~~ 145 (174)
T 3gfs_A 74 Y-HSGMSGALKNALDFLSSEQ-----FKYKPVALLAVAGGGD--GGINALNNMRTVMRGVYANVIPKQLVLKPVHIDVEN 145 (174)
T ss_dssp S-SSSCCHHHHHHHHTCCHHH-----HTTCEEEEEEECCSTT--CSHHHHHHHHHHHHHTTCEEEEEEEEECGGGEETTT
T ss_pred c-CCCCCHHHHHHHHHhCHhh-----hCCCcEEEEEECCCCh--hHHHHHHHHHHHHHHcCCEEecceEEechhhcCCCC
Confidence 9 8999999999999986532 88999999995 3221 234667889999999999876543222 2 12
Q ss_pred CCchHHHHHHHHHHHHHHHHhh
Q 006697 222 QCIEDDFTAWRELVWPELDQLL 243 (635)
Q Consensus 222 ~~~e~~f~~W~~~l~~~L~~~~ 243 (635)
....+...+..+.+...|....
T Consensus 146 ~~~~~~~~~~l~~~~~~l~~~~ 167 (174)
T 3gfs_A 146 ATVAENIKESIKELVEELSMFA 167 (174)
T ss_dssp TEECHHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHHHHHH
Confidence 2223444555555555555543
No 77
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=98.90 E-value=2.6e-08 Score=100.58 Aligned_cols=127 Identities=13% Similarity=0.080 Sum_probs=100.3
Q ss_pred CCCeEEEEEECCC--chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCc---------hHHHhhhccCCeEEEEEecCC
Q 006697 82 GKTKVTVFYGTQT--GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDD---------EQYEEKLKKETLAFFMVATYG 150 (635)
Q Consensus 82 ~~~~v~I~YgSqt--Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~---------~~~~~~l~~~~~vif~~sTyg 150 (635)
.+++|+|+|||.. |+|+.+|+.+++.+.+. |++++++|+.+++..+ ..+..++...+.+||++|+|
T Consensus 33 ~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~--g~eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~AD~iI~~sP~Y- 109 (247)
T 2q62_A 33 HRPRILILYGSLRTVSYSRLLAEEARRLLEFF--GAEVKVFDPSGLPLPDAAPVSHPKVQELRELSIWSEGQVWVSPER- 109 (247)
T ss_dssp SCCEEEEEECCCCSSCHHHHHHHHHHHHHHHT--TCEEEECCCTTCCCTTSSCTTSHHHHHHHHHHHHCSEEEEEEECS-
T ss_pred CCCeEEEEEccCCCCCHHHHHHHHHHHHHhhC--CCEEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHHCCEEEEEeCCC-
Confidence 4689999999986 99999999999999887 8999999998875211 23566788999999999999
Q ss_pred CCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEee
Q 006697 151 DGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLV 213 (635)
Q Consensus 151 ~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~ 213 (635)
+|.+|...+.|++|+.........+++|++++++.+-.. +.. .+...+...|..+|+..+.
T Consensus 110 n~sipa~LKn~iD~l~~~~~~~~~l~gK~v~~v~tsG~~-gg~-~a~~~Lr~~l~~lg~~~v~ 170 (247)
T 2q62_A 110 HGAMTGIMKAQIDWIPLSTGSIRPTQGKTLAVMQVSGGS-QSF-NAVNQMRILGRWMRMITIP 170 (247)
T ss_dssp SSSCCHHHHHHHHTSCSCBTTBCSSTTCEEEEEEECSSS-CCC-HHHHHHHHHHHHTTCEECS
T ss_pred CCCccHHHHHHHHHhhhccCcccccCCCEEEEEEeCCCc-cHH-HHHHHHHHHHHHCCCEEeC
Confidence 899999999999999653111134899999999984322 211 3567888889999998763
No 78
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=98.81 E-value=6.5e-08 Score=99.20 Aligned_cols=126 Identities=10% Similarity=0.014 Sum_probs=99.9
Q ss_pred CCCeEEEEEECCC--chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCc----------hHHHhhhccCCeEEEEEecC
Q 006697 82 GKTKVTVFYGTQT--GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDD----------EQYEEKLKKETLAFFMVATY 149 (635)
Q Consensus 82 ~~~~v~I~YgSqt--Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~----------~~~~~~l~~~~~vif~~sTy 149 (635)
.+++|+|+|||.. |+|+.+|+.+++.+.+. |++++++|+.+.+..+ ..+..++...+.+||++|+|
T Consensus 57 ~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~--G~eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~ADgiV~aSP~Y 134 (279)
T 2fzv_A 57 PPVRILLLYGSLRARSFSRLAVEEAARLLQFF--GAETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSEGQVWCSPER 134 (279)
T ss_dssp SCCEEEEEESCCSSSCHHHHHHHHHHHHHHHT--TCEEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCSEEEEEEEEE
T ss_pred CCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhC--CCEEEEEehhcCCCCccCccCCCHHHHHHHHHHHHCCeEEEEcCcc
Confidence 4789999999986 99999999999999887 8999999998765211 22556678899999999999
Q ss_pred CCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEe
Q 006697 150 GDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARL 212 (635)
Q Consensus 150 g~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v 212 (635)
+|.+|..++.|++|+.........+++|.+++++.+... +.. .+...+...|..+|+..+
T Consensus 135 -n~sipg~LKn~IDrl~~~~g~~~~l~gK~v~lv~tsG~~-gg~-~a~~~Lr~~l~~lg~~vv 194 (279)
T 2fzv_A 135 -HGQITSVMKAQIDHLPLEMAGIRPTQGRTLAVMQVSGGS-QSF-NAVNTLRLLGRWMRMFTI 194 (279)
T ss_dssp -TTEECHHHHHHHHHSCSCBTTBCSSTTCEEEEEEECSSS-CCC-HHHHHHHHHHHHTTCEEC
T ss_pred -ccCcCHHHHHHHHHHhhhcccccccCCCEEEEEEECCCc-cHH-HHHHHHHHHHHhcCcEEe
Confidence 999999999999999653111134899999999985332 222 345678888999999876
No 79
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=98.80 E-value=1.1e-07 Score=93.01 Aligned_cols=157 Identities=8% Similarity=0.041 Sum_probs=110.6
Q ss_pred CCeEEEEEECCC----chHHHHHHHHHHHHHhhhCCceEEEEeCC--CCCcCc---------------------------
Q 006697 83 KTKVTVFYGTQT----GTAEGFAKALAEEIKARYEKAAVKVVDLD--DYAMDD--------------------------- 129 (635)
Q Consensus 83 ~~~v~I~YgSqt----Gtte~~A~~l~~~l~~~~~g~~~~v~dl~--~~~~~~--------------------------- 129 (635)
+|+|+|+|||.. |+|+.+|+.+.+.++++.++++++++|+. +.+...
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDVYAPETNMPEIDEELLSAWGALRAGAAFETLSENQQQ 80 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTCGGGCCCCCCHHHHHHHHHHHHTCCGGGSCHHHHH
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeCCcccCCCCcCCHHHHHhhcCcccccccccCCHHHHh
Confidence 468999999997 99999999999999987112889999998 654211
Q ss_pred -----hHHHhhhccCCeEEEEEecCCCCCCChhHHHHHHHHhcCCC--------CCCCCCCceEEEEEecCcchhHHHHH
Q 006697 130 -----EQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGND--------RGPWLQQLKFGVFGLGNRQYEHFNKI 196 (635)
Q Consensus 130 -----~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~~L~~~~~--------~~~~l~~~~~aVFGlGds~Y~~f~~~ 196 (635)
..+..++..++.+||++|+| .+.+|..++.|++++..... ....++++++++|......|.+-..+
T Consensus 81 ~~~~~~~~~~~l~~aD~iv~~~P~y-~~~~pa~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~~~~~~ 159 (208)
T 2hpv_A 81 KVARFNELTDQFLSADKVVIANPMW-NLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGFYEGKDFA 159 (208)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEEEETTEEEESCCSCEEEEEEEESSCCCSCSHH
T ss_pred hHHHHHHHHHHHHhCCEEEEEeccc-cCCCCHHHHHHHHHHhcCCcEeecCCCCCccCCCCCeEEEEEecCCCCCCcchH
Confidence 11345678899999999999 88999999999999864210 01237899999997644445431334
Q ss_pred HHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHHHHHHHHHH
Q 006697 197 GIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQ 241 (635)
Q Consensus 197 ~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~~~L~~ 241 (635)
...+...|.-+|++.+.......-.. .++...+|.++..+.+.+
T Consensus 160 ~~~l~~~~~~~G~~~~~~~~~~~~~~-~~~~~~~~l~~a~~~~~~ 203 (208)
T 2hpv_A 160 SQYIKAILNFIGVDQVDGLFIEGIDH-FPDRAEELLNTAMTKATE 203 (208)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEECTTT-CGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeeeEEEEccccC-CHHHHHHHHHHHHHHHHH
Confidence 56677788899998776544332222 335566777666555443
No 80
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=98.68 E-value=2.6e-07 Score=89.61 Aligned_cols=128 Identities=13% Similarity=0.114 Sum_probs=98.3
Q ss_pred CCeEEEEEECC--CchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCc-----------hHHHhhhccCCeEEEEEecC
Q 006697 83 KTKVTVFYGTQ--TGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDD-----------EQYEEKLKKETLAFFMVATY 149 (635)
Q Consensus 83 ~~~v~I~YgSq--tGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~-----------~~~~~~l~~~~~vif~~sTy 149 (635)
++||+|++||. .|+|+.+|+.+.+.+. . +++++++|+.++..-+ ..+..++...+.+||++|+|
T Consensus 2 M~kilii~gS~r~~s~t~~la~~~~~~~~-~--~~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~AD~iV~~sP~y 78 (192)
T 3fvw_A 2 SKRILFIVGSFSEGSFNRQLAKKAETIIG-D--RAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQEADAIWIFSPVY 78 (192)
T ss_dssp -CEEEEEESCCSTTCHHHHHHHHHHHHHT-T--SSEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHHCSEEEEECCCB
T ss_pred CCEEEEEEcCCCCCCHHHHHHHHHHHhcC-C--CCEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHhCCEEEEECccc
Confidence 47999999998 6999999999999996 5 7889999987654211 23566788999999999999
Q ss_pred CCCCCChhHHHHHHHHhcCCC-----CCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecce
Q 006697 150 GDGEPTDNAARFYKWFTEGND-----RGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLG 216 (635)
Q Consensus 150 g~G~~p~na~~F~~~L~~~~~-----~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g 216 (635)
.+.+|...+.|++++..... ....++||++++++.+... .+..+...+...|..+|++.+....
T Consensus 79 -~~~~p~~lK~~iD~~~~~~~~~~~~g~~~l~gK~~~i~~t~gg~--g~~~~~~~l~~~l~~~G~~~v~~~v 147 (192)
T 3fvw_A 79 -NYAIPGPVKNLLDWLSRSLDLSDPTGPSVLQDKIVTVSSVANGA--SPEEVFEDYRSLLPFIRMHLVDQLT 147 (192)
T ss_dssp -TTBCCHHHHHHHHHHTSCSCSSCTTSCCTTTTCEEEEEEESCCC-----CCSHHHHHHHHHTTCEECCCCE
T ss_pred -ccCCCHHHHHHHHHhhccccccCCCCCccCCCCEEEEEEeCCCc--chhHHHHHHHHHHHHcCCeeeccee
Confidence 88999999999999975210 0134899999999986552 1233457788899999999775543
No 81
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=98.63 E-value=7.3e-07 Score=87.53 Aligned_cols=158 Identities=11% Similarity=0.088 Sum_probs=112.2
Q ss_pred CCeEEEEEECCCc---hHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcC----------------------------chH
Q 006697 83 KTKVTVFYGTQTG---TAEGFAKALAEEIKARYEKAAVKVVDLDDYAMD----------------------------DEQ 131 (635)
Q Consensus 83 ~~~v~I~YgSqtG---tte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~----------------------------~~~ 131 (635)
||+|+|++||..+ +|..+|+.+.+.++++++|.+++++|+.+.+.. -..
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQ 80 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEESSSSCCCCCCHHHHHHHTCSSGGGCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHHhhcCCcccCCHHHHHHHHHHHH
Confidence 5789999999765 599999999999987766788999998654311 012
Q ss_pred HHhhhccCCeEEEEEecCCCCCCChhHHHHHHHHhcCC-------CC-----CCCCCCceEEEEEecC--cchh-----H
Q 006697 132 YEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGN-------DR-----GPWLQQLKFGVFGLGN--RQYE-----H 192 (635)
Q Consensus 132 ~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~~L~~~~-------~~-----~~~l~~~~~aVFGlGd--s~Y~-----~ 192 (635)
+..++...+.+||++|+| .+.+|...+.|++++.... .. ...|+||++.++.... ..|. .
T Consensus 81 ~~~~l~~AD~iV~~~P~y-~~~~pa~lK~~iD~~~~~g~~f~~~~~~g~~~~~~~l~gK~~~~i~t~g~~~~~~~~~~~~ 159 (212)
T 3r6w_A 81 LVGELFDSDLLVISTPMY-NFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQA 159 (212)
T ss_dssp HHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEEEEECC-CEEEEECCCSCEEEEEEECSSSCCSTTCTTGG
T ss_pred HHHHHHhCCEEEEEcCcc-cccCCHHHHHHHHHHhhCCceeecccCCCCccccccCCCCEEEEEEecCCCCcCCCCCCCc
Confidence 456678899999999999 8899999999999984311 11 1248999998887733 2331 1
Q ss_pred HHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHHHHHHHHHHh
Q 006697 193 FNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQL 242 (635)
Q Consensus 193 f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~ 242 (635)
+......+...|.-+|++.+.... .......+++.++|.++..+.+.++
T Consensus 160 ~~~~~~~l~~~l~~~G~~~~~~v~-~~g~~~~~~~~~~~l~~a~~~~~~l 208 (212)
T 3r6w_A 160 MNHADPWLRTALGFIGIDEVTVVA-AEGEESGGRSFEDSCDEAEQRLLAL 208 (212)
T ss_dssp GCCSHHHHHHHHHHHTCCEEEEEE-ECCTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHCCCceeEEEE-EecccCCHHHHHHHHHHHHHHHHHH
Confidence 233446677788888998875443 3222234667788887776666543
No 82
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=98.62 E-value=3.2e-07 Score=87.47 Aligned_cols=125 Identities=13% Similarity=0.128 Sum_probs=86.5
Q ss_pred CCeEEEEEECCC--chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCc-----------------Cc-hHHHhhhccCCeE
Q 006697 83 KTKVTVFYGTQT--GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAM-----------------DD-EQYEEKLKKETLA 142 (635)
Q Consensus 83 ~~~v~I~YgSqt--Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~-----------------~~-~~~~~~l~~~~~v 142 (635)
+|+|+|+|+|.. |||+.+|+.+++.+ +++++++.+.+. ++ ..+..++.+++.+
T Consensus 3 mMkilii~~S~r~~g~t~~la~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~i 75 (184)
T 1rli_A 3 AMKIAVINGGTRSGGNTDVLAEKAVQGF-------DAEHIYLQKYPIQPIEDLRHAQGGFRPVQDDYDSIIERILQCHIL 75 (184)
T ss_dssp --CEEEEESSCSSCCHHHHHHHHHHTTT-------CCEEEEC-----------------------CHHHHHHHHHTCSEE
T ss_pred CcEEEEEECCCCCCccHHHHHHHHHcCC-------eEEEEEcCCCCCccCCccccccCCCCCCCCCHHHHHHHHHhCCEE
Confidence 578999999965 99999999998755 245555554422 11 2345678899999
Q ss_pred EEEEecCCCCCCChhHHHHHHHHhcCCCCC------CCCCCceEEEEEecCcchh-HHHHHHHHHHHHHHHCCCEEeecc
Q 006697 143 FFMVATYGDGEPTDNAARFYKWFTEGNDRG------PWLQQLKFGVFGLGNRQYE-HFNKIGIVLDEELCKQGGARLVPL 215 (635)
Q Consensus 143 if~~sTyg~G~~p~na~~F~~~L~~~~~~~------~~l~~~~~aVFGlGds~Y~-~f~~~~k~ld~~L~~lGa~~v~~~ 215 (635)
||++|+| .|.+|..++.|++++....... ..++++++++|+.+..... .+..+.+.+...|..+|++.+...
T Consensus 76 i~~~P~y-~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~l~~~l~~~G~~~~~~~ 154 (184)
T 1rli_A 76 IFATPIY-WFGMSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGDNPKIKGLPLIQQFEHIFHFMGMSFKGYV 154 (184)
T ss_dssp EEEEECB-TTBCCHHHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEESSCHHHHTHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEeCcc-ccCCcHHHHHHHHHhHHhccCccccccccccCCCeEEEEEeCCCCCccchHHHHHHHHHHHHHcCCccceEE
Confidence 9999999 8889999999999875311000 1278999999998654321 223456788888999999877543
No 83
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=98.55 E-value=9.1e-07 Score=86.34 Aligned_cols=154 Identities=11% Similarity=0.093 Sum_probs=110.2
Q ss_pred CCeEEEEEEC--CCchHHHHHHHHHHHHHhhhCCceEE-EEeCCCCCcCc------------hHHHhhhccCCeEEEEEe
Q 006697 83 KTKVTVFYGT--QTGTAEGFAKALAEEIKARYEKAAVK-VVDLDDYAMDD------------EQYEEKLKKETLAFFMVA 147 (635)
Q Consensus 83 ~~~v~I~YgS--qtGtte~~A~~l~~~l~~~~~g~~~~-v~dl~~~~~~~------------~~~~~~l~~~~~vif~~s 147 (635)
.+||++++|| ..++++.+|+.+.+.+. . |++++ ++|+.+...-+ ..+..++...+.+||++|
T Consensus 6 ~mkIl~I~GS~r~~s~t~~la~~~~~~~~-~--g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~~~~i~~AD~iVi~tP 82 (199)
T 4hs4_A 6 PLHFVTLLGSLRKASFNAAVARALPEIAP-E--GIAITPLGSIGTFPHYSQDVQEEGFPAPVLTMAQQIATADAVVIVTP 82 (199)
T ss_dssp CEEEEEEECCCSTTCHHHHHHHHHHHHCC-T--TEEEEECCCGGGSCCCCHHHHHHCCCHHHHHHHHHHHHSSEEEEEEC
T ss_pred CCEEEEEEcCCCCCChHHHHHHHHHHHcc-C--CCEEEEEEehhhcCCCCccccccCCCHHHHHHHHHHHhCCEEEEEcC
Confidence 4799999999 66999999999998885 4 67888 88886543211 235566888999999999
Q ss_pred cCCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEee-c-ceee------c
Q 006697 148 TYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLV-P-LGLG------D 219 (635)
Q Consensus 148 Tyg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~-~-~g~g------D 219 (635)
+| ++..|.-.+.|++|+... ....+++|++++++.+...++.. .+...+...|..+|+..+. | +..+ |
T Consensus 83 ~Y-~~s~p~~LK~~iD~~~~~--~~~~l~gK~v~~v~tsgg~~g~~-~a~~~Lr~il~~lg~~~v~~~~v~i~~~~~~fd 158 (199)
T 4hs4_A 83 EY-NYSVPGVLKNAIDWLSRV--SPQPLAGKPVALVTASPGMIGGA-RAQNHLRQSLVFLDAYVLNRPEAMIGQVTGKVD 158 (199)
T ss_dssp CB-TTBCCHHHHHHHHHHTTS--SSCTTTTCEEEEEEECSSSSCSH-HHHHHHHHHHHHTTCEECCSSCEEECSGGGTBC
T ss_pred cc-CCCcCHHHHHHHHHhccc--CCcccCCCEEEEEEeCCCCcccH-HHHHHHHHHHHHcCCEEcCCCeEEeechhhhcC
Confidence 99 889999999999999762 12348999999999865555332 2456888889999998774 2 2222 2
Q ss_pred C--CCCchHHHHHHHHHHHHHHHHhh
Q 006697 220 D--DQCIEDDFTAWRELVWPELDQLL 243 (635)
Q Consensus 220 ~--~~~~e~~f~~W~~~l~~~L~~~~ 243 (635)
+ +.-.++...+-.+.+...|....
T Consensus 159 ~~~g~l~d~~~~~~l~~~~~~l~~~~ 184 (199)
T 4hs4_A 159 AQTLELSDVATREFLARQLDALAALA 184 (199)
T ss_dssp SSSCCBCCHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 2 22124556666666666665543
No 84
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=98.55 E-value=7.6e-07 Score=86.36 Aligned_cols=127 Identities=13% Similarity=0.117 Sum_probs=96.5
Q ss_pred CCCeEEEEEECCC--chHHHHHHHHHH----HHHhhhCCceEEEEeCCCCCc----------C-c--hHHHhhhccCCeE
Q 006697 82 GKTKVTVFYGTQT--GTAEGFAKALAE----EIKARYEKAAVKVVDLDDYAM----------D-D--EQYEEKLKKETLA 142 (635)
Q Consensus 82 ~~~~v~I~YgSqt--Gtte~~A~~l~~----~l~~~~~g~~~~v~dl~~~~~----------~-~--~~~~~~l~~~~~v 142 (635)
.+.||+++.||.. |++..+|+.+.+ .++++.++++++++|+.+++. . + ..+.+++...+.+
T Consensus 10 ~~~~il~i~GS~r~~S~t~~La~~~~~~~~~~l~~~~~g~eve~idL~d~~l~~~~~~~~~~~~~~~~~~~~~i~~AD~i 89 (191)
T 3k1y_A 10 HMRTLAVISAGLSTPSSTRQIADSISEAVTAAVSARGEALSVSTIELSELIPDLMTAMTTRVHTTKLEEITSALSASDGL 89 (191)
T ss_dssp CSEEEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHTTTTSSSCCCHHHHHHHHHHHHCSEE
T ss_pred hhceEEEEECCCCCCCHHHHHHHHHHHHhHHHHHhcCCCceEEEEEHHhCCCcccChhhcCCCCHHHHHHHHHHHHCCEE
Confidence 4779999999975 789999999999 555542257889998876542 0 1 2366678889999
Q ss_pred EEEEecCCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecc
Q 006697 143 FFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPL 215 (635)
Q Consensus 143 if~~sTyg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~ 215 (635)
||++|+| ++.+|..++.|++|+... .+++|++++++.|... .+.......+...|..+|+..+.+.
T Consensus 90 vi~sP~Y-~~~~~~~lK~~iD~~~~~-----~l~gK~~~~v~t~G~~-~~~~~~~~~L~~il~~lg~~vv~~~ 155 (191)
T 3k1y_A 90 VVATPVF-KASYTGLFKMFFDILDTD-----ALTGMPTIIAATAGSA-RHSLVLDYALRPLLSYMRAVVVPTG 155 (191)
T ss_dssp EEEEECB-TTBSCHHHHHHHHHSCTT-----TTTTCEEEEEEEESSS-TTTTHHHHTHHHHHHHTTCEECSCC
T ss_pred EEEcCcc-CCcCcHHHHHHHHHhhhh-----hcCCCEEEEEEeCCCc-chhhHHHHHHHHHHHHCCCEEcCcE
Confidence 9999999 899999999999999653 3899999999987432 3333333448888999999877443
No 85
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=98.52 E-value=9.6e-07 Score=85.85 Aligned_cols=156 Identities=12% Similarity=0.061 Sum_probs=113.4
Q ss_pred CeEEEEEECCC--chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCc-------------------CchHHHhhhccCCeE
Q 006697 84 TKVTVFYGTQT--GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAM-------------------DDEQYEEKLKKETLA 142 (635)
Q Consensus 84 ~~v~I~YgSqt--Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~-------------------~~~~~~~~l~~~~~v 142 (635)
|||+|++||-. +++..+|+.+.+.+ +. |.+++++|+.+... +-..+.+++...+.+
T Consensus 1 MkiLiI~gspr~~s~t~~l~~~~~~~~-~~--g~~v~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~i 77 (196)
T 3lcm_A 1 MKILIVYTHPNPTSFNAEILKQVQTNL-SK--EHTVSTLDLYAEHFDPVLQFNETHKRRDLAKVAEMEKYRDLVTWADHL 77 (196)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHS-CT--TSEEEEEETTTTTCCCCCCCCSSSCGGGGGGCGGGHHHHHHHHHCSEE
T ss_pred CEEEEEEeCCCCCChHHHHHHHHHHHh-cC--CCeEEEEEcccCCCCccCChHHHHhhcCCCCcHHHHHHHHHHHhCCEE
Confidence 68999999964 47899999999999 66 88999999975532 113355667889999
Q ss_pred EEEEecCCCCCCChhHHHHHHHHhcCC------C--CCCCCCCceEEEEEecCcc--hhH--HHHHHHHHHHHHHHCCCE
Q 006697 143 FFMVATYGDGEPTDNAARFYKWFTEGN------D--RGPWLQQLKFGVFGLGNRQ--YEH--FNKIGIVLDEELCKQGGA 210 (635)
Q Consensus 143 if~~sTyg~G~~p~na~~F~~~L~~~~------~--~~~~l~~~~~aVFGlGds~--Y~~--f~~~~k~ld~~L~~lGa~ 210 (635)
||++|.| .+.+|.-.+.|++++.... . ....|+||++.++..+... |.. ++.....+...|.-+|++
T Consensus 78 V~~~P~y-~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~y~~~~~~~~~~~l~~~l~~~G~~ 156 (196)
T 3lcm_A 78 IFIFPIW-WSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNTPSFAMPFVQDYGKVLKKQILKPCAIS 156 (196)
T ss_dssp EEEEECB-TTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSSCGGGTTTSSCTTHHHHHHTTGGGTCC
T ss_pred EEECchh-hccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCCchhhHhhhccCHHHHHHHHHHhcCCc
Confidence 9999999 8999999999999984311 0 0135899999999886655 421 111124556666778998
Q ss_pred EeecceeecCCCCchHHHHHHHHHHHHHHHHhh
Q 006697 211 RLVPLGLGDDDQCIEDDFTAWRELVWPELDQLL 243 (635)
Q Consensus 211 ~v~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~~ 243 (635)
.+.......-....++...+|.+++.+...+.+
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~ 189 (196)
T 3lcm_A 157 PVKLTELTSIEKISDDERQKLLHKVAQITRNIL 189 (196)
T ss_dssp CEEEEEECSTTTSCHHHHHHHHHHHHHHHHTCC
T ss_pred eeeEEEEeCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 776665554444567888999998877776544
No 86
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=98.50 E-value=3e-06 Score=83.78 Aligned_cols=155 Identities=11% Similarity=0.059 Sum_probs=113.7
Q ss_pred CCCeEEEEEECC------CchHHHHHHHHHHHHHhhhCCceEEEEeCCC-CCcCchHHHhhhccCCeEEEEEecCCCCCC
Q 006697 82 GKTKVTVFYGTQ------TGTAEGFAKALAEEIKARYEKAAVKVVDLDD-YAMDDEQYEEKLKKETLAFFMVATYGDGEP 154 (635)
Q Consensus 82 ~~~~v~I~YgSq------tGtte~~A~~l~~~l~~~~~g~~~~v~dl~~-~~~~~~~~~~~l~~~~~vif~~sTyg~G~~ 154 (635)
.+++|+|++||. .+.+..+++.+.+.+.+. |+++++.|+++ +|.+ ....++...+.+||++|.| .+.+
T Consensus 24 ~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~--g~ev~~~dL~~~~Dv~--~~~~~l~~aD~iv~~~P~y-~~~~ 98 (218)
T 3rpe_A 24 AMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRES--GHQVKITTVDQGYDIE--SEIENYLWADTIIYQMPAW-WMGE 98 (218)
T ss_dssp CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHT--TCCEEEEEGGGCCCHH--HHHHHHHHCSEEEEEEECB-TTBC
T ss_pred cCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhC--CCEEEEEECCCccCHH--HHHHHHHhCCEEEEECChH-hccC
Confidence 478999999997 368899999999999887 88999999974 3333 3567788999999999999 8889
Q ss_pred ChhHHHHHHHHhcC--C-----------------CCCCCCCCceEEEEEecCcchhHH-------HH-----HHHHHHHH
Q 006697 155 TDNAARFYKWFTEG--N-----------------DRGPWLQQLKFGVFGLGNRQYEHF-------NK-----IGIVLDEE 203 (635)
Q Consensus 155 p~na~~F~~~L~~~--~-----------------~~~~~l~~~~~aVFGlGds~Y~~f-------~~-----~~k~ld~~ 203 (635)
|.-.+.|++.+... . ..+..|+||++.++-..+...+.| +. +-.-+...
T Consensus 99 p~~lK~~iD~v~~~g~af~y~~~g~~~~~p~~~yG~~glL~gKk~~li~T~G~p~~~y~~~g~~~~g~~~~~~l~p~~~~ 178 (218)
T 3rpe_A 99 PWILKKYIDEVFTDGHGRLYQSDGRTRSDATKGYGSGGLIQGKTYMLSVTWNAPREAFTDPEQFFHGVGVDGVYLPFHKA 178 (218)
T ss_dssp CHHHHHHHHHHHHHTBTTTBCCCSCCSTTTTSCTTCCBSCTTCEEEEEEECSSCTHHHHCTTSTTTTCHHHHHTHHHHHH
T ss_pred CHHHHHHHHHHHhcCcceeeccccccccccccccCCccCCCCCEEEEEEcCCCChHhhcccccccccCCHHHHHHHHHHH
Confidence 99999999987431 1 112358999988887644442222 22 11224666
Q ss_pred HHHCCCEEeecceeecCCCCchHHHHHHHHHHHHHHHHhh
Q 006697 204 LCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLL 243 (635)
Q Consensus 204 L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~~ 243 (635)
|.-+|.+.+.+....+... ++++++|.+++-+.|.+++
T Consensus 179 l~f~G~~~l~~~~~~g~~~--~~~~~~~~~~~~~~L~~~~ 216 (218)
T 3rpe_A 179 NQFLGMKPLPTFMCNDVIK--QPDIEGDIARYRQHLAENV 216 (218)
T ss_dssp HHHTTCEECCCEEECSTTT--SCCHHHHHHHHHHHHHHHT
T ss_pred HHhCCCEEeceEEEeCCCC--hHHHHHHHHHHHHHHHHhc
Confidence 7788999887666554432 4578888888877777654
No 87
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=98.44 E-value=3.4e-06 Score=86.31 Aligned_cols=159 Identities=14% Similarity=-0.008 Sum_probs=109.6
Q ss_pred CCeEEEEEECCC--chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCc---------------------------------
Q 006697 83 KTKVTVFYGTQT--GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAM--------------------------------- 127 (635)
Q Consensus 83 ~~~v~I~YgSqt--Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~--------------------------------- 127 (635)
+|+|+|+|||.. |+|..+|+.+.+.+++. |.+++++|+.+...
T Consensus 2 MmkiLiI~gSpr~~s~t~~la~~~~~~l~~~--g~eV~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (273)
T 1d4a_A 2 GRRALIVLAHSERTSFNYAMKEAAAAALKKK--GWEVVESDLYAMNFNPIISRKDITGKLKDPANFQYPAESVLAYKEGH 79 (273)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHT--TCEEEEEETTTTTCCCCCCGGGBCSCCSSTTSCCHHHHHHHHHHHTC
T ss_pred CCEEEEEEeCCCCccHHHHHHHHHHHHHHhC--CCeEEEEEccccCCCCcCCHHHHHhhccCcccccchhhhhhhhhccc
Confidence 579999999987 68999999999999887 88999999976542
Q ss_pred --Cc-hHHHhhhccCCeEEEEEecCCCCCCChhHHHHHHHHhcCCC--------CCCCCCCceEEEEEecCcc---hhH-
Q 006697 128 --DD-EQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGND--------RGPWLQQLKFGVFGLGNRQ---YEH- 192 (635)
Q Consensus 128 --~~-~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~~L~~~~~--------~~~~l~~~~~aVFGlGds~---Y~~- 192 (635)
++ .....++..++.|||++|.| .+.+|...+.|++++..... ....++|+++.++...... |.+
T Consensus 80 ~~dd~~~~~~~l~~AD~IV~~~P~y-~~s~Pa~LK~~iDrv~~~g~~f~~~~~~~~g~l~gK~~~~i~t~Gg~~~~y~~~ 158 (273)
T 1d4a_A 80 LSPDIVAEQKKLEAADLVIFQFPLQ-WFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQ 158 (273)
T ss_dssp BCHHHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBCTTSCGGGSTTTTCEEEEEEECSSCTGGGSTT
T ss_pred CcHHHHHHHHHHHhCCEEEEECchh-hccCCHHHHHHHHHHHhcCcccccCCCCCccccCCCEEEEEEeCCCChHHhccc
Confidence 01 11233477889999999999 88889999999999854210 0134899999998874433 421
Q ss_pred -HH----HHHHHHH-HHHHHCCCEEeecceeecCCCCchHHHHHHHHHHHHHHHHhhc
Q 006697 193 -FN----KIGIVLD-EELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLR 244 (635)
Q Consensus 193 -f~----~~~k~ld-~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~~~ 244 (635)
.+ .....+. ..|.-+|++.+.+..........++..++|.++....+.++..
T Consensus 159 g~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~l~~ 216 (273)
T 1d4a_A 159 GIHGDMNVILWPIQSGILHFCGFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWD 216 (273)
T ss_dssp BTTCCHHHHHHHHHTTTTGGGTCEECCCEEETTGGGSCHHHHHHHHHHHHHHHTTGGG
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCeeeeEEEEeccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 11 1222222 2456789987755544433323456777787777777766553
No 88
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=98.40 E-value=4.5e-06 Score=83.18 Aligned_cols=161 Identities=16% Similarity=0.095 Sum_probs=113.3
Q ss_pred CCeEEEEEECCCc--hHHHHHHHHHHHHHhhhCCceEEEEeCCCCCc---------------------------------
Q 006697 83 KTKVTVFYGTQTG--TAEGFAKALAEEIKARYEKAAVKVVDLDDYAM--------------------------------- 127 (635)
Q Consensus 83 ~~~v~I~YgSqtG--tte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~--------------------------------- 127 (635)
.|||+|++||-.. ++..+|+.+.+.++++ |++++++||.+.+.
T Consensus 1 ~mkiLiI~gspr~~S~t~~l~~~~~~~l~~~--g~ev~~~dL~~~~~~P~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 78 (228)
T 3tem_A 1 GKKVLIVYAHQEPKSFNGSLKNVAVDELSRQ--GCTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRS 78 (228)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHH--TCEEEEEETTTTTCCCCCCGGGBCSCCSCTTSCCHHHHHHHHHHHTC
T ss_pred CCEEEEEEeCCCCCCHHHHHHHHHHHHHHHC--CCEEEEEEhhhcCCcccCCHHHHhhhccccccccchhhhhhhhhcCC
Confidence 4789999999764 4999999999999988 89999999976431
Q ss_pred --Cc-hHHHhhhccCCeEEEEEecCCCCCCChhHHHHHHHHhcCC--C------CCCCCCCceEEEEEecCcc---hhH-
Q 006697 128 --DD-EQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGN--D------RGPWLQQLKFGVFGLGNRQ---YEH- 192 (635)
Q Consensus 128 --~~-~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~~L~~~~--~------~~~~l~~~~~aVFGlGds~---Y~~- 192 (635)
++ .....++...+.+||++|.| .+.+|.-++.|++++.... . ....|+||++.++...... |..
T Consensus 79 ~~dd~~~~~~~l~~aD~iv~~~P~y-~~~~p~~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~~~T~g~~~~~y~~~ 157 (228)
T 3tem_A 79 LASDITDEQKKVREADLVIFQFPLY-WFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKT 157 (228)
T ss_dssp BCHHHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBCSSCCGGGCTTTTCEEEEEEECSSCTTTTSTT
T ss_pred CcHHHHHHHHHHHhCCEEEEECChh-hcccCHHHHHHHHHHhhcCcccccCCCCCCCCCCCCEEEEEEeCCCCHHHHhhc
Confidence 01 11234467889999999999 8889999999999985321 0 0135899999988764333 421
Q ss_pred -HHHHHHH----HH-HHHHHCCCEEeecceeecCCCCchHHHHHHHHHHHHHHHHhhcCC
Q 006697 193 -FNKIGIV----LD-EELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDE 246 (635)
Q Consensus 193 -f~~~~k~----ld-~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~~~~~ 246 (635)
++...+. +. ..+.-+|.+.+.+....+.....++...+|.++..+.|..+...+
T Consensus 158 g~~~~~~~~l~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 217 (228)
T 3tem_A 158 GVNGDSRYFLWPLQHGTLHFCGFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEE 217 (228)
T ss_dssp STTCCHHHHHHHHHCCCCCTTTCEECCCEEECCTTTSCHHHHHHHHHHHHHHHHTGGGCC
T ss_pred cccCCHHHHHHHHHHHHHHhCCceEcCeEEEcCCCCCCHHHHHHHHHHHHHHHHhhccCC
Confidence 2221222 21 123446888877666666555567888999999888887655433
No 89
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=97.75 E-value=3.8e-08 Score=96.20 Aligned_cols=125 Identities=10% Similarity=0.093 Sum_probs=94.4
Q ss_pred CCeEEEEEECCC--chHHHHHHHHHHHHHhhhCCceEEEE-eCCCCC---cC---------chHHHhhhccCCeEEEEEe
Q 006697 83 KTKVTVFYGTQT--GTAEGFAKALAEEIKARYEKAAVKVV-DLDDYA---MD---------DEQYEEKLKKETLAFFMVA 147 (635)
Q Consensus 83 ~~~v~I~YgSqt--Gtte~~A~~l~~~l~~~~~g~~~~v~-dl~~~~---~~---------~~~~~~~l~~~~~vif~~s 147 (635)
.|+|+|+|||.. |+++.+|+.+++.+.+ |++++++ |+.++. .+ -..+..++...+.+||++|
T Consensus 6 ~mkIliI~gS~r~~s~t~~la~~~~~~~~~---g~~v~~i~dl~~lp~~~~~~~~~~~~~~~~~~~~~i~~AD~iIi~tP 82 (199)
T 3s2y_A 6 PLHFVTLLGSLRKASFNAAVARALPEIAPE---GIAITPLGSIGTFPHYSQDVQEEGFPAPVLTMAQQIATADAVVIVTP 82 (199)
Confidence 578999999997 8999999999998874 5778888 887621 11 1124556778899999999
Q ss_pred cCCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeec
Q 006697 148 TYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVP 214 (635)
Q Consensus 148 Tyg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~ 214 (635)
+| ++..|...+.|++|+..... ..+++|++++|+.+...++ ...+...+...|..+|+..+..
T Consensus 83 ~Y-~~s~p~~lK~~iD~l~~~~~--~~l~gK~v~~v~tsgg~~g-~~~a~~~Lr~~l~~lg~~~v~~ 145 (199)
T 3s2y_A 83 EY-NYSVPGVLKNAIDWLSRVSP--QPLAGKPVALVTASPGMIG-GARAQYHLRQSLVFLDAYVLNR 145 (199)
Confidence 99 77888899999999965310 1389999999996433332 2345678888888899987754
No 90
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=98.37 E-value=9.2e-06 Score=79.41 Aligned_cols=147 Identities=11% Similarity=0.116 Sum_probs=103.7
Q ss_pred CCCeEEEEEECCC------chHHHHHHHHHHHHHhhhCCceEEEEeCCC-CCcCchHHHhhhccCCeEEEEEecCCCCCC
Q 006697 82 GKTKVTVFYGTQT------GTAEGFAKALAEEIKARYEKAAVKVVDLDD-YAMDDEQYEEKLKKETLAFFMVATYGDGEP 154 (635)
Q Consensus 82 ~~~~v~I~YgSqt------Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~-~~~~~~~~~~~l~~~~~vif~~sTyg~G~~ 154 (635)
+..+|+|+.||-. +++..+|+.+.+.+++. |.+++++|+.+ .+. ..+.+++...+.+||++|.| .+.+
T Consensus 11 ~~~~iLii~gsP~~~~s~~s~~~~l~~~~~~~~~~~--g~~v~~~dL~~~~d~--~~~~~~l~~AD~iV~~~P~y-~~s~ 85 (204)
T 2amj_A 11 GSSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDL--GHDVRIVRADSDYDV--KAEVQNFLWADVVIWQMPGW-WMGA 85 (204)
T ss_dssp -CCEEEEEECCC------CHHHHHHHHHHHHHHHHT--TCEEEEEESSSCCCH--HHHHHHHHHCSEEEEEEECB-TTBC
T ss_pred CCcCEEEEEcCCCcccCcCcHHHHHHHHHHHHHHHc--CCEEEEEeCCccccH--HHHHHHHHhCCEEEEECCcc-ccCC
Confidence 4678999999988 99999999999999988 88999999975 333 33677788999999999999 8899
Q ss_pred ChhHHHHHHHHhcC--C-----------------CCCCCCCCceEEEEEecCcchhHHH------------HHHHHHHHH
Q 006697 155 TDNAARFYKWFTEG--N-----------------DRGPWLQQLKFGVFGLGNRQYEHFN------------KIGIVLDEE 203 (635)
Q Consensus 155 p~na~~F~~~L~~~--~-----------------~~~~~l~~~~~aVFGlGds~Y~~f~------------~~~k~ld~~ 203 (635)
|.-.+.|++.+... . .....+++|+++++.........|. .+...+...
T Consensus 86 pa~LK~~iDrv~~~g~~~~y~~~~~~~~~~~~~~g~~~~l~gK~~~~i~t~g~~~~~y~~~g~~~~~~~~~~~l~~l~~~ 165 (204)
T 2amj_A 86 PWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKA 165 (204)
T ss_dssp CHHHHHHHHHHHHHTBTTTBSSSCC-------CTTCCBSCTTCEEEEEEECSSCTHHHHCTTSSSCSCCHHHHTHHHHHH
T ss_pred CHHHHHHHHHHhhcCcceeeccCcccccccccccCcccccCCCeEEEEEeCCCChHHHccCcccccCCCHHHHHHHHHHH
Confidence 99999999965210 0 0123589999999987554322221 222336677
Q ss_pred HHHCCCEEeecceeecCCC--CchHHHHHHHH
Q 006697 204 LCKQGGARLVPLGLGDDDQ--CIEDDFTAWRE 233 (635)
Q Consensus 204 L~~lGa~~v~~~g~gD~~~--~~e~~f~~W~~ 233 (635)
|.-+|++.+.+....+-.. ..++.++++++
T Consensus 166 l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (204)
T 2amj_A 166 NQFLGMEPLPTFIANDVIKMPDVPRYTEEYRK 197 (204)
T ss_dssp HHHTTCEECCCEEECSTTTSCCTTTHHHHHHH
T ss_pred HHHcCCeecceEEEeCCCCcHHHHHHHHHHHH
Confidence 8889999875554433221 34444444443
No 91
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=98.35 E-value=5.3e-06 Score=81.54 Aligned_cols=158 Identities=9% Similarity=0.084 Sum_probs=112.4
Q ss_pred CCeEEEEEECCC----chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcC-----------------------------c
Q 006697 83 KTKVTVFYGTQT----GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMD-----------------------------D 129 (635)
Q Consensus 83 ~~~v~I~YgSqt----Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~-----------------------------~ 129 (635)
+++|+|++||-. +++..+|+.+.+.++++.+|++++++||.+.+.. -
T Consensus 4 M~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (211)
T 3p0r_A 4 MTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDLYKEELPYVGVDMINGTFKAGKGFDLTEEEAKAVAVA 83 (211)
T ss_dssp CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEGGGSCCCCCCHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred cCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHhhhccCccccCCHHHHhhHHHH
Confidence 579999999965 7899999999999988766788999998654320 0
Q ss_pred hHHHhhhccCCeEEEEEecCCCCCCChhHHHHHHHHhcCCC--------CCCCCCCceEEEEEecCcchhH-----HHHH
Q 006697 130 EQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGND--------RGPWLQQLKFGVFGLGNRQYEH-----FNKI 196 (635)
Q Consensus 130 ~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~~L~~~~~--------~~~~l~~~~~aVFGlGds~Y~~-----f~~~ 196 (635)
..+..++...+.+||++|.| .+.+|.-.+.|++++..... ....|+||++.++..-...|.+ +...
T Consensus 84 ~~~~~~~~~aD~iv~~~P~y-~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~~~~~~~~~~~~ 162 (211)
T 3p0r_A 84 DKYLNQFLEADKVVFGFPLW-NLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVYSEGPAAEVEMA 162 (211)
T ss_dssp HHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCCSSSTTGGGCBS
T ss_pred HHHHHHHHhCCEEEEEcChh-cccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCCCCCCccchhHH
Confidence 12445577889999999999 88999999999999853210 1124889999988864444532 2334
Q ss_pred HHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHHHHHHHHHHh
Q 006697 197 GIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQL 242 (635)
Q Consensus 197 ~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~ 242 (635)
...+...|.-+|++.+........ ....+.-++|.++....+.++
T Consensus 163 ~~~l~~~l~~~G~~~v~~i~~~g~-~~~~~~~~~~l~~a~~~~~~~ 207 (211)
T 3p0r_A 163 VKYVASMMGFFGATNMETVVIEGH-NQFPDKAEEIITAGLEEAAKV 207 (211)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEECT-TTSGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeeeEEEEecc-ccCchHHHHHHHHHHHHHHHH
Confidence 566777888899986654433222 223456778887776666543
No 92
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=98.34 E-value=3.7e-06 Score=81.55 Aligned_cols=157 Identities=9% Similarity=0.017 Sum_probs=107.1
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCC----cCchHHHhhhccCCeEEEEEecCCCCCCChhH
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYA----MDDEQYEEKLKKETLAFFMVATYGDGEPTDNA 158 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~----~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na 158 (635)
||||+|++||..++...+++.+.+.+++. |.+++++|+.+.. .+-.....++...+.+||++|.| .+.+|.-.
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~--g~ev~~~dL~~~~~~~~~dv~~~~~~l~~AD~iv~~~P~y-~~~~pa~l 77 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQH--TDRFTVHELYAVYPQGKIDVAAEQKLIETHDSLVWQFPIY-WFNCPPLL 77 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTC--TTTEEEEEHHHHCTTCCCCHHHHHHHHHTSSSEEEEEECB-TTBCCHHH
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhC--CCeEEEEEchhcCCCCchhHHHHHHHHHhCCEEEEEcChh-hcCCCHHH
Confidence 57899999999987667999999999877 7789999875422 12233566788999999999999 88899999
Q ss_pred HHHHHHHhcCC----CCCCCCCCceEEEEEecCcchhHH----------HHHHHHHHHHHHHCCCEEeecceeecCCC--
Q 006697 159 ARFYKWFTEGN----DRGPWLQQLKFGVFGLGNRQYEHF----------NKIGIVLDEELCKQGGARLVPLGLGDDDQ-- 222 (635)
Q Consensus 159 ~~F~~~L~~~~----~~~~~l~~~~~aVFGlGds~Y~~f----------~~~~k~ld~~L~~lGa~~v~~~g~gD~~~-- 222 (635)
+.|++++.... ..+..|+||++.++.......++| .....-+...+.-+|.+.+.+....+-..
T Consensus 78 K~~iDrv~~~g~~y~~~g~~l~gK~~~~~~t~G~~~~~y~~~g~~~~~~~~~l~pl~~~~~f~G~~~~~~~~~~g~~~~~ 157 (192)
T 3f2v_A 78 KQWLDEVLTYGWAYGSKGKALKGRKIALAVSLGAPAADYRADGAVGCSVAEVLRPFELTAKYCNADYRPPFTFHTIDSNA 157 (192)
T ss_dssp HHHHHHHSCBTTTBSSSCCSSTTCEEEEEEEESSCGGGSSTTSSSCSCHHHHHHHHHHHHHHTTCEECCCEEEEC-----
T ss_pred HHHHHHHhhcCccccCCCCCCCCCEEEEEEeCCCChHhhccCCccccCHHHHHHHHHHHHHhCCCeEeeeEEEecccccc
Confidence 99999975321 112459999999988754442222 22333456778889999876665544321
Q ss_pred ----CchHHHHHHHHHHHHHHHHh
Q 006697 223 ----CIEDDFTAWRELVWPELDQL 242 (635)
Q Consensus 223 ----~~e~~f~~W~~~l~~~L~~~ 242 (635)
..++++++..++..+.|.++
T Consensus 158 ~~~~~~~~~~~~~~~~y~~~l~~~ 181 (192)
T 3f2v_A 158 GYSEAARQEVERSARDYLAWLDAL 181 (192)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHHH
Confidence 13455555555555555543
No 93
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=98.20 E-value=1.9e-05 Score=76.51 Aligned_cols=154 Identities=12% Similarity=0.110 Sum_probs=106.8
Q ss_pred CCeEEEEEECC--CchHHHHHHHHHHHHHhhhCCceEE-EEeCCCCCcCc-------------hHHHhhhccCCeEEEEE
Q 006697 83 KTKVTVFYGTQ--TGTAEGFAKALAEEIKARYEKAAVK-VVDLDDYAMDD-------------EQYEEKLKKETLAFFMV 146 (635)
Q Consensus 83 ~~~v~I~YgSq--tGtte~~A~~l~~~l~~~~~g~~~~-v~dl~~~~~~~-------------~~~~~~l~~~~~vif~~ 146 (635)
.++|+++.||- .+++..+|+.+.+.+ .. |++++ ++|+.+...-+ ..+..++...+.+||++
T Consensus 4 ~mkil~I~GS~r~~s~t~~l~~~~~~~~-~~--g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~l~~~i~~AD~iv~~s 80 (193)
T 3svl_A 4 KLQVVTLLGSLRKGSFNGMVARTLPKIA-PA--SMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVT 80 (193)
T ss_dssp CEEEEEEECCCSTTCHHHHHHHHGGGTS-CT--TEEEEECCCSTTCCCCCHHHHHHTCSCHHHHHHHHHHHHSSEEEEEE
T ss_pred CCEEEEEEccCCCCCHHHHHHHHHHHHc-cC--CCEEEEEEeHHHCCCCCcccccccCCCHHHHHHHHHHHHCCEEEEEe
Confidence 58999999995 588899998876644 34 78888 88887653211 12456678899999999
Q ss_pred ecCCCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEee-c-c------eee
Q 006697 147 ATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLV-P-L------GLG 218 (635)
Q Consensus 147 sTyg~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~-~-~------g~g 218 (635)
|+| ++.+|...+.|++|+.... ...+++|++++++..-..++.. .+...+...|..+|+..+. | . ...
T Consensus 81 P~y-~~~~~~~lK~~iD~~~~~~--~~~~~gK~~~~~~~s~g~~gg~-~a~~~Lr~~l~~lg~~v~~~~~~~~~~~~~~f 156 (193)
T 3svl_A 81 PEY-NYSVPGGLKNAIDWLSRLP--DQPLAGKPVLIQTSSMGVIGGA-RCQYHLRQILVFLDAMVMNKPEFMGGVIQNKV 156 (193)
T ss_dssp CCB-TTBCCHHHHHHHHHHHTST--TCTTTTCEEEEEEECSSTTTTH-HHHHHHHHHHHHTTCEECCSSCEEETTGGGGE
T ss_pred ccc-CCCCCHHHHHHHHHHhhcC--ccccCCCeEEEEEeCCCCcchH-HHHHHHHHHHHHCCCEEcCCCeEeecchhhhc
Confidence 999 9999999999999997621 2348999999999622222222 3557888899999998763 1 1 112
Q ss_pred cCC--CCchHHHHHHHHHHHHHHHHhh
Q 006697 219 DDD--QCIEDDFTAWRELVWPELDQLL 243 (635)
Q Consensus 219 D~~--~~~e~~f~~W~~~l~~~L~~~~ 243 (635)
|++ .-.+++..+..+.+...+....
T Consensus 157 ~~~~g~l~d~~~~~~l~~~~~~~~~~~ 183 (193)
T 3svl_A 157 DPQTGEVIDQGTLDHLTGQLTAFGEFI 183 (193)
T ss_dssp ETTTTEECCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcCCCHHHHHHHHHHHHHHHHHH
Confidence 332 1134566666666666666544
No 94
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=98.15 E-value=5.3e-05 Score=75.06 Aligned_cols=161 Identities=10% Similarity=0.035 Sum_probs=113.4
Q ss_pred CCCeEEEEEECC-----CchHHHHHHHHHHHHHhhhCCc-eEEEEeCCCCCcC--c------------------------
Q 006697 82 GKTKVTVFYGTQ-----TGTAEGFAKALAEEIKARYEKA-AVKVVDLDDYAMD--D------------------------ 129 (635)
Q Consensus 82 ~~~~v~I~YgSq-----tGtte~~A~~l~~~l~~~~~g~-~~~v~dl~~~~~~--~------------------------ 129 (635)
.||+|+|+.||- .+++..+++.+.+.++++.++. +++++||.+.+.. +
T Consensus 3 ~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~idL~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (223)
T 3u7i_A 3 AMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQINLYDDVVPMIDKTVLSAWEKQGNGQELTREEQKVT 82 (223)
T ss_dssp CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEETTTSCCCCCCHHHHHHHHHHTTTCCCCHHHHHHH
T ss_pred ccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEECcCCCCCCCCHHHHHHhhccccccccCHHHHHHH
Confidence 378999999995 5899999999999998875567 8999998754321 0
Q ss_pred ---hHHHhhhccCCeEEEEEecCCCCCCChhHHHHHHHHhcCC------CCC--CCC-CCceEEEEEecCcch------h
Q 006697 130 ---EQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGN------DRG--PWL-QQLKFGVFGLGNRQY------E 191 (635)
Q Consensus 130 ---~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~~L~~~~------~~~--~~l-~~~~~aVFGlGds~Y------~ 191 (635)
..+..++...+.+||++|.| .+.+|...+.|++++.... ..+ ..+ +++++.++......| .
T Consensus 83 d~~~~l~~~~~~aD~iv~~~P~y-~~~~p~~lK~~iD~~~~~g~~f~~~~~g~~~~l~~gK~~~~i~t~gg~~~~~~~~~ 161 (223)
T 3u7i_A 83 ERMSEILQQFKSANTYVIVLPLH-NFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGGIYTNDDWYT 161 (223)
T ss_dssp HHHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEEECSSCEEESCCSSCEEEEEEECSSCCSSSSHHH
T ss_pred HHHHHHHHHHHhCCEEEEEcChh-hccCCHHHHHHHHHHhhcCCceecCCCCCcccccCCCEEEEEEeCCCCCCCCCccc
Confidence 12455677889999999999 8899999999999986421 001 235 789998887733334 2
Q ss_pred HHHHHHHHHHHHHHHCCCEEeecceeecC-CCCchHHHHHHHHHHHHHHHHhh
Q 006697 192 HFNKIGIVLDEELCKQGGARLVPLGLGDD-DQCIEDDFTAWRELVWPELDQLL 243 (635)
Q Consensus 192 ~f~~~~k~ld~~L~~lGa~~v~~~g~gD~-~~~~e~~f~~W~~~l~~~L~~~~ 243 (635)
.+......+...|.-+|++.+..+..... ....++.++++.+++-...++..
T Consensus 162 ~~~~~~~~l~~~l~~~G~~~~~~i~~~g~~~~~~~~~~~~a~~~~~~~~~~f~ 214 (223)
T 3u7i_A 162 DVEYSHKYLKAMFNFLGIEDYQIVRAQGTAVLDPTEVLQNAYKEVEEAASRLA 214 (223)
T ss_dssp HTCHHHHHHHHHHHHHTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHCCCceeEEEEEcCccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 23345567788888899987754433222 22467777788777665555443
No 95
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=98.14 E-value=7.5e-05 Score=72.17 Aligned_cols=153 Identities=10% Similarity=0.107 Sum_probs=102.2
Q ss_pred CCeEEEEEECC--CchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCc---Cc--------hHHHhhhccCCeEEEEEecC
Q 006697 83 KTKVTVFYGTQ--TGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAM---DD--------EQYEEKLKKETLAFFMVATY 149 (635)
Q Consensus 83 ~~~v~I~YgSq--tGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~---~~--------~~~~~~l~~~~~vif~~sTy 149 (635)
+++|+|+.||. ...++++|+.+++.+. . +++++++|+.+... +. ..+...+...+.+||++|.|
T Consensus 2 ~k~I~vi~GS~R~~S~~~~la~~~~~~~~-~--~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~aD~~ii~tPeY 78 (190)
T 3u7r_A 2 VKTVAVMVGSLRKDSLNHKLMKVLQKLAE-G--RLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEHSDAVLAITPEY 78 (190)
T ss_dssp CEEEEEEESCCSTTCHHHHHHHHHHHHHT-T--TEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHTSSEEEEECCCB
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHhcc-C--CCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHhCCcEEEechhh
Confidence 46799999995 4567889998877664 3 67888888876432 10 12345577899999999999
Q ss_pred CCCCCChhHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeec--cee------ecCC
Q 006697 150 GDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVP--LGL------GDDD 221 (635)
Q Consensus 150 g~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~--~g~------gD~~ 221 (635)
+|..|.-.+.|++|+.... ....+.+|.++++|.+-..++... +...+...|..+|+..+.. ... .|++
T Consensus 79 -n~s~pg~LKn~iDwlsr~~-~~~~~~gKpv~~v~~S~G~~Gg~~-a~~~Lr~vl~~lg~~v~~~p~~~i~~~~~~fd~~ 155 (190)
T 3u7r_A 79 -NRSYPGMIKNAIDWATRPY-GQNSWKGKPAAVIGTSPGVIGAAL-AQARLKNDLLHVGTVMMSMPEAYIQWHAEAYAAD 155 (190)
T ss_dssp -TTBCCHHHHHHHHHHHCST-TCCTTTTCEEEEEEEESSTTTTHH-HHHHHHHHHHTTTCEECCCSCCEEECCGGGBCTT
T ss_pred -cccCCHHHHHHHHHhcccc-cCCccCCCEEEEEEeCCchhhHHH-HHHHHHHHHHHcCCEEccCCEEEEeccHhcCCCC
Confidence 8999999999999996421 123489999999997444443322 3456777888899987632 111 1222
Q ss_pred -CCchHHHHHHHHHHHHHHHH
Q 006697 222 -QCIEDDFTAWRELVWPELDQ 241 (635)
Q Consensus 222 -~~~e~~f~~W~~~l~~~L~~ 241 (635)
.-.++...+..+.+...|.+
T Consensus 156 G~l~de~~~~~l~~~~~~~~~ 176 (190)
T 3u7r_A 156 GSVTDEKTAKFLQGFVDAFVD 176 (190)
T ss_dssp SCBCSHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH
Confidence 22345555555555555544
No 96
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=97.96 E-value=0.00011 Score=70.14 Aligned_cols=150 Identities=11% Similarity=-0.011 Sum_probs=103.0
Q ss_pred CeEEEEEECCC---chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHH
Q 006697 84 TKVTVFYGTQT---GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAAR 160 (635)
Q Consensus 84 ~~v~I~YgSqt---Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~ 160 (635)
|||+|++||-. +.+.+++...++.+ .++++.||.+ +.+-....+++...+.+||++|.| .+.+|.-.+.
T Consensus 1 MkiLii~ghP~~~~S~~~~~l~~~~~~~------~~v~v~dL~~-~~D~~~~~~~l~~aD~iV~~~P~y-~~~~pa~lK~ 72 (177)
T 3ha2_A 1 MQTLIIVAHPELARSNTQPFFKAAIENF------SNVTWHPLVA-DFNVEQEQSLLLQNDRIILEFPLY-WYSAPALLKQ 72 (177)
T ss_dssp CCEEEEECCTTTTTCSSHHHHHHHHTTC------TTEEEEECCT-TCCHHHHHHHHHTCSEEEEEEECB-TTBCCHHHHH
T ss_pred CeEEEEEcCCCcccCHHHHHHHHHHhcC------CCEEEEECCC-cccHHHHHHHHHhCCEEEEECChh-hccCCHHHHH
Confidence 57999999965 44444444444332 3488999986 332234677788999999999999 8888999999
Q ss_pred HHHHHhcC---CCCCCCCCCceEEEEEecCcchhHH----------HHHHHHHHHHHHHCCCEEeecceeecCCCCchHH
Q 006697 161 FYKWFTEG---NDRGPWLQQLKFGVFGLGNRQYEHF----------NKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDD 227 (635)
Q Consensus 161 F~~~L~~~---~~~~~~l~~~~~aVFGlGds~Y~~f----------~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~ 227 (635)
|++.+... -..+..|+||++.++.......+.| ....+-+...+.-+|.+.+.+.....-+...+++
T Consensus 73 ~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~~~y~~~g~~g~~~~~~l~p~~~~~~~~G~~~~~~~~~~g~~~~~~~~ 152 (177)
T 3ha2_A 73 WMDTVMTTKFATGHQYALEGKELGIVVSTGDNGNAFQAGAAEKFTISELMRPFEAFANKTKMMYLPILAVHQFLYLEPDA 152 (177)
T ss_dssp HHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCGGGSSTTSTTCSCHHHHTHHHHHHHHHTTCEECCCEEEESGGGSCHHH
T ss_pred HHHHHhhcccccCCCcCCCCCEEEEEEeCCCChHHhcccCcccCCHHHHHHHHHHHHHhCCCeEeCeEEEeCCCCCCHHH
Confidence 99986431 0012348999999987754442222 2333445666778899988666655444456788
Q ss_pred HHHHHHHHHHHHHH
Q 006697 228 FTAWRELVWPELDQ 241 (635)
Q Consensus 228 f~~W~~~l~~~L~~ 241 (635)
.++|.++..+.|.+
T Consensus 153 ~~~~l~~~~~~l~~ 166 (177)
T 3ha2_A 153 QQRLLVAYQQYATN 166 (177)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcc
Confidence 99999888777764
No 97
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=97.75 E-value=0.00078 Score=68.95 Aligned_cols=163 Identities=15% Similarity=0.033 Sum_probs=110.5
Q ss_pred cCCCeEEEEEEC--CCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcC------------------------------
Q 006697 81 AGKTKVTVFYGT--QTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMD------------------------------ 128 (635)
Q Consensus 81 ~~~~~v~I~YgS--qtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~------------------------------ 128 (635)
-..|||+|+||+ ..+.+..+++.+.+.++++ |.+|+++||-+.+.+
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~--G~eV~v~DLy~~~f~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQA--GHEVQVSDLYAMRWKAGYDADDSGAPPVGEFWRPTLDSKQAFAQG 97 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHT--TCEEEEEETTTTTCCCSCCGGGSSSSCSSSSCCHHHHHHHHHHHT
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHC--CCeEEEEEccccCCCCcCCHHHhcccccccccChhhHHHHHhhcC
Confidence 357899999998 4467889999999999988 899999998543221
Q ss_pred ----c-hHHHhhhccCCeEEEEEecCCCCCCChhHHHHHHHHhcCC----------------CCCCCCCCceEEEEEecC
Q 006697 129 ----D-EQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGN----------------DRGPWLQQLKFGVFGLGN 187 (635)
Q Consensus 129 ----~-~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~~L~~~~----------------~~~~~l~~~~~aVFGlGd 187 (635)
+ .....++...+.+||++|.| .+.+|.-.+.|++.+-... .....|+||++.++-.-+
T Consensus 98 ~~~~dv~~~~~~l~~aD~iv~~~P~~-w~~~Pa~lK~~iDrv~~~g~ay~~~~~~~~~~~~~~~~g~l~gKk~~l~~T~g 176 (280)
T 4gi5_A 98 TQSADIVAEQEKLLWADTVIFQFPLW-WFSMPAIMKGWIDRVYAWGFAYGVGEHSDRHWGDRYGEGTFVGKRAMLIVTAG 176 (280)
T ss_dssp CSCHHHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBSCSCBSSSCBSSCSSCSTTTTCEEEEEEECS
T ss_pred CCcHHHHHHHHHHHhCCEEEEEeccc-cccCcHHHHHHHHHhcccCceeccCCccccccccccCccccCCCEEEEEEecC
Confidence 0 11234467789999999999 8888999999999874311 012357899987665533
Q ss_pred cc---h--hHHHHHHHHHHHHH-----HHCCCEEeecceeecCCCCchHHHHHHHHHHHHHHHHhhcCC
Q 006697 188 RQ---Y--EHFNKIGIVLDEEL-----CKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDE 246 (635)
Q Consensus 188 s~---Y--~~f~~~~k~ld~~L-----~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~~~~~ 246 (635)
.. | ..|+.....+-..+ .-+|.+.+-+....+.+...++++.+|.+++-+.|..+...+
T Consensus 177 ~~~~~y~~~g~~~~~~~~l~~~~~~~~~~~Gm~~l~~f~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~ 245 (280)
T 4gi5_A 177 GWAEHYSPRGINGPIDDILFPIQHGMLFYPGFEVLPPLVFYRTDKTDAGQFADQCAALAERLDTLWQTE 245 (280)
T ss_dssp SCGGGGSTTBTTCCHHHHTHHHHCCCCCTTTCEECCCEEECSGGGCCHHHHHHHHHHHHHHHHTTTTSC
T ss_pred CChHHccccccCCCHHHHHHHHHHHHHHcCCCeECCcEEEecCCCCCHHHHHHHHHHHHHHHhhhhhcC
Confidence 32 3 12232222221111 225888887777665555678889999999888888766444
No 98
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.65 E-value=0.0007 Score=73.18 Aligned_cols=157 Identities=13% Similarity=0.069 Sum_probs=106.1
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCC----CCCcCchHHHhhhccCCeEEEEEecCCCCCCChhH
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLD----DYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNA 158 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~----~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na 158 (635)
+|+|+|++||-..+...+.+.+.+.+.+. ..+.+.||. +++.+-..+...+...+.+||++|.| .+..|.-.
T Consensus 236 ~mkiLvi~gspr~~ss~~n~~l~~~~~~~---~~v~v~dL~~~~p~~~~d~~~~~~~l~~aD~iv~~~P~y-w~~~Pa~l 311 (413)
T 3l9w_A 236 SGMILIIYAHPYPHHSHANKRMLEQARTL---EGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQ-WYSIPPLL 311 (413)
T ss_dssp -CCEEEEECCSCGGGCSHHHHHHHHHHTS---SSEEEEEHHHHCTTSCCCHHHHHHHHHTCSEEEEEEECB-TTBCCHHH
T ss_pred CCCEEEEEECCCcchHHHHHHHHHHHhcC---CCEEEEEchhhCCCCcHHHHHHHHHHHhCCEEEEECchh-hccCCHHH
Confidence 47899999998887666788888887643 347777763 22222234667788999999999999 88889999
Q ss_pred HHHHHHHhcCC----CCCCCCCCceEEEEEecCcchhHH--------HHHHHHHHHHHHHCCCEEeecceeecCCCCchH
Q 006697 159 ARFYKWFTEGN----DRGPWLQQLKFGVFGLGNRQYEHF--------NKIGIVLDEELCKQGGARLVPLGLGDDDQCIED 226 (635)
Q Consensus 159 ~~F~~~L~~~~----~~~~~l~~~~~aVFGlGds~Y~~f--------~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~ 226 (635)
+.|++++.... ..+..|+||++.++.......++| ...-.-+...|.-+|++.+.+........-.++
T Consensus 312 K~~iDrv~~~g~~y~~~~~~l~gK~~~~~~t~g~~~~~y~~~~~~~~~~~l~~l~~~~~~~G~~~l~~~~~~g~~~~~d~ 391 (413)
T 3l9w_A 312 KLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDE 391 (413)
T ss_dssp HHHHHHHSCBTTTBSTTCCTTTTCEEEEEEECSSCGGGGCCSSSCSGGGGGHHHHHHHHHTTCEECCCEEECCSTTCCHH
T ss_pred HHHHHHHHhcCceecCCCCccccceEEEEEeCCCChHhhCCCCccCchHHHHHHHHHHHhCCCeecceEEEcCCCCCCHH
Confidence 99999985321 112358999998876633322222 223356667778889998766544443334466
Q ss_pred HHHHHHHHHHHHHHHhh
Q 006697 227 DFTAWRELVWPELDQLL 243 (635)
Q Consensus 227 ~f~~W~~~l~~~L~~~~ 243 (635)
+..++.++....|..+.
T Consensus 392 ~~~~~~~~~~~~L~~~~ 408 (413)
T 3l9w_A 392 TLEGQARHYKQRLLEWQ 408 (413)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 67777776666666544
No 99
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=68.81 E-value=8.5 Score=34.27 Aligned_cols=110 Identities=12% Similarity=0.160 Sum_probs=60.8
Q ss_pred EEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCC-CCCcCchHHHhhhccCCe-EEEEEecCCCCCCChhHHHHHHHH
Q 006697 88 VFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLD-DYAMDDEQYEEKLKKETL-AFFMVATYGDGEPTDNAARFYKWF 165 (635)
Q Consensus 88 I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~-~~~~~~~~~~~~l~~~~~-vif~~sTyg~G~~p~na~~F~~~L 165 (635)
|+-++.-|..-++-..+...+-+.. | .+++++- +...++ +.....+.+. +|.+|++. +.-...+.++.+.|
T Consensus 6 vvla~~~~d~HdiG~~~v~~~l~~~-G--~~Vi~lG~~~p~e~--~v~~a~~~~~d~v~lS~~~--~~~~~~~~~~i~~l 78 (137)
T 1ccw_A 6 IVLGVIGSDCHAVGNKILDHAFTNA-G--FNVVNIGVLSPQEL--FIKAAIETKADAILVSSLY--GQGEIDCKGLRQKC 78 (137)
T ss_dssp EEEEEETTCCCCHHHHHHHHHHHHT-T--CEEEEEEEEECHHH--HHHHHHHHTCSEEEEEECS--STHHHHHTTHHHHH
T ss_pred EEEEeCCCchhHHHHHHHHHHHHHC-C--CEEEECCCCCCHHH--HHHHHHhcCCCEEEEEecC--cCcHHHHHHHHHHH
Confidence 4445766666666555555543333 5 4556553 333433 5555555544 44445444 34345677778888
Q ss_pred hcCCCCCCCCCCceEEEEEec---CcchhHHHHHHHHHHHHHHHCCCEEeecce
Q 006697 166 TEGNDRGPWLQQLKFGVFGLG---NRQYEHFNKIGIVLDEELCKQGGARLVPLG 216 (635)
Q Consensus 166 ~~~~~~~~~l~~~~~aVFGlG---ds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g 216 (635)
++.. +.+.++.|=|-. ...| ....+.++++|+..++..+
T Consensus 79 ~~~g-----~~~i~v~vGG~~~~~~~~~-------~~~~~~~~~~G~d~~~~~g 120 (137)
T 1ccw_A 79 DEAG-----LEGILLYVGGNIVVGKQHW-------PDVEKRFKDMGYDRVYAPG 120 (137)
T ss_dssp HHTT-----CTTCEEEEEESCSSSSCCH-------HHHHHHHHHTTCSEECCTT
T ss_pred HhcC-----CCCCEEEEECCCcCchHhh-------hhhHHHHHHCCCCEEECCC
Confidence 7643 445666555522 2234 2345678899998887544
No 100
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=66.04 E-value=6.6 Score=39.19 Aligned_cols=75 Identities=15% Similarity=-0.002 Sum_probs=45.5
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHHH
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFY 162 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~ 162 (635)
+++|+|+=|++ -+.-|..|.+.|++. |++|++++..+...+ ..+|.++++||+.- +....-.+...+.+.
T Consensus 4 m~~vLiV~g~~---~~~~a~~l~~aL~~~--g~~V~~i~~~~~~~~----~~~L~~yDvIIl~d-~~~~~l~~~~~~~L~ 73 (259)
T 3rht_A 4 MTRVLYCGDTS---LETAAGYLAGLMTSW--QWEFDYIPSHVGLDV----GELLAKQDLVILSD-YPAERMTAQAIDQLV 73 (259)
T ss_dssp --CEEEEESSC---TTTTHHHHHHHHHHT--TCCCEEECTTSCBCS----SHHHHTCSEEEEES-CCGGGBCHHHHHHHH
T ss_pred CceEEEECCCC---chhHHHHHHHHHHhC--CceEEEecccccccC----hhHHhcCCEEEEcC-CccccCCHHHHHHHH
Confidence 67888883222 134466677777777 888999988776321 22388999999873 221222334556667
Q ss_pred HHHhc
Q 006697 163 KWFTE 167 (635)
Q Consensus 163 ~~L~~ 167 (635)
+|.++
T Consensus 74 ~yV~~ 78 (259)
T 3rht_A 74 TMVKA 78 (259)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77764
No 101
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=65.98 E-value=34 Score=34.32 Aligned_cols=74 Identities=16% Similarity=0.205 Sum_probs=46.7
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCC-ceEEEEeC-------CCCCcCchHHHhhhccCCeEEEEEecCCCCCC
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEK-AAVKVVDL-------DDYAMDDEQYEEKLKKETLAFFMVATYGDGEP 154 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g-~~~~v~dl-------~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~ 154 (635)
..+|+|+-|...-.-+..+..|++.|++. | ++|.+.+- +.++ ++ |.++++||+ .+.|+--+
T Consensus 4 ~~kvLiv~G~~~H~~~~~~~~l~~~l~~~--g~f~V~~~~d~~~~~d~~~f~-~~------L~~~D~vV~--~~~~~~l~ 72 (281)
T 4e5v_A 4 PIKTLLITGQNNHNWQVSHVVLKQILENS--GRFDVDFVISPEQGKDMSGFV-LD------FSPYQLVVL--DYNGDSWP 72 (281)
T ss_dssp CEEEEEEESCCSSCHHHHHHHHHHHHHHT--TSEEEEEEECCCTTSCCTTCC-CC------CTTCSEEEE--CCCSSCCC
T ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHHhc--CCEEEEEEeCCccccchhHHh-hh------hhcCCEEEE--eCCCCcCC
Confidence 56788885554334677778888888776 5 88887743 2232 23 888999884 33332223
Q ss_pred ChhHHHHHHHHhc
Q 006697 155 TDNAARFYKWFTE 167 (635)
Q Consensus 155 p~na~~F~~~L~~ 167 (635)
+...+.|.+++++
T Consensus 73 ~~~~~~l~~yV~~ 85 (281)
T 4e5v_A 73 EETNRRFLEYVQN 85 (281)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 3445667777765
No 102
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=62.02 E-value=16 Score=31.46 Aligned_cols=43 Identities=19% Similarity=0.218 Sum_probs=34.7
Q ss_pred CCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceE--EEEeCCCCC
Q 006697 82 GKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAV--KVVDLDDYA 126 (635)
Q Consensus 82 ~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~--~v~dl~~~~ 126 (635)
.+++|+++.+|--||+.-++.+|.+.+.+. |+.+ ...++.++.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~--gi~~~V~~~~~~~~~ 64 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSH--NIPVELIQCRVNEIE 64 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHT--TCCEEEEEECTTTTT
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHc--CCeEEEEEecHHHHh
Confidence 367899999999999999999999999887 7654 444565553
No 103
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=57.38 E-value=24 Score=34.89 Aligned_cols=63 Identities=13% Similarity=0.096 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhhhCCceEEEEeCCCCCcC-chHHHhhhccCCeEEEEEecCCCCCCChhHHHHHHHHhc
Q 006697 100 FAKALAEEIKARYEKAAVKVVDLDDYAMD-DEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTE 167 (635)
Q Consensus 100 ~A~~l~~~l~~~~~g~~~~v~dl~~~~~~-~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~~L~~ 167 (635)
++..|++.|++. ++++.+..+++.... + .+.|.++++||+...+.+.--.++..+.|.+++++
T Consensus 33 ~~~~i~~~L~~~--gf~V~~~t~dd~~~~~~---~~~L~~~DvvV~~~~~~~~~l~~~~~~al~~~V~~ 96 (252)
T 1t0b_A 33 MHTVIASYLAEA--GFDAATAVLDEPEHGLT---DEVLDRCDVLVWWGHIAHDEVKDEVVERVHRRVLE 96 (252)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESSSGGGGCC---HHHHHTCSEEEEECSSCGGGSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhC--CcEEEEEeccCccccCC---HhHHhcCCEEEEecCCCCCcCCHHHHHHHHHHHHc
Confidence 345567777776 788988776654321 1 12378999999875554333344446678888865
No 104
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=56.70 E-value=13 Score=34.52 Aligned_cols=58 Identities=16% Similarity=0.233 Sum_probs=42.3
Q ss_pred CCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHH
Q 006697 174 WLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAW 231 (635)
Q Consensus 174 ~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W 231 (635)
+.+.++++|+-.||....-++..+..+.++|+++|++...-....|+.+.+.+.+..|
T Consensus 7 ~~~~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a 64 (172)
T 1mkz_A 7 EFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAW 64 (172)
T ss_dssp SCCCCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCCEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHH
Confidence 3677899999999997667778888899999999998665444445533344444444
No 105
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=48.64 E-value=24 Score=29.97 Aligned_cols=56 Identities=9% Similarity=0.091 Sum_probs=39.4
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEE--eCCCCCcCchHHHhhhccCCeEEEEEecC
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVV--DLDDYAMDDEQYEEKLKKETLAFFMVATY 149 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~--dl~~~~~~~~~~~~~l~~~~~vif~~sTy 149 (635)
+++|+++.|+--+|+ -+++.+.+.++++ |+++++. ++.+.. + .+.+++ +|+.+|..
T Consensus 3 mkkIll~Cg~G~sTS-~l~~k~~~~~~~~--gi~~~i~a~~~~~~~--~-----~~~~~D-vil~~pqv 60 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTS-LLVSKMRAQAEKY--EVPVIIEAFPETLAG--E-----KGQNAD-VVLLGPQI 60 (106)
T ss_dssp CEEEEEECSSSTTTH-HHHHHHHHHHHHS--CCSEEEEEECSSSTT--H-----HHHHCS-EEEECTTS
T ss_pred CcEEEEECCCchhHH-HHHHHHHHHHHHC--CCCeEEEEecHHHHH--h-----hccCCC-EEEEccch
Confidence 568999999999999 8999999999988 7766554 444432 2 134556 44455544
No 106
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=46.72 E-value=51 Score=28.07 Aligned_cols=79 Identities=14% Similarity=0.123 Sum_probs=48.4
Q ss_pred CCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEE--eCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhHH
Q 006697 82 GKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVV--DLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAA 159 (635)
Q Consensus 82 ~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~--dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~ 159 (635)
.+++|+++.+ ..++|--+|+++.+.++++ |+++++. ...+++. . +.+++++++ .|-. +
T Consensus 5 ~~mkIlL~C~-aGmSTsllv~km~~~a~~~--gi~v~i~a~~~~~~~~-~------~~~~DvvLL-gPQV---------~ 64 (108)
T 3nbm_A 5 KELKVLVLCA-GSGTSAQLANAINEGANLT--EVRVIANSGAYGAHYD-I------MGVYDLIIL-APQV---------R 64 (108)
T ss_dssp CCEEEEEEES-SSSHHHHHHHHHHHHHHHH--TCSEEEEEEETTSCTT-T------GGGCSEEEE-CGGG---------G
T ss_pred cCceEEEECC-CCCCHHHHHHHHHHHHHHC--CCceEEEEcchHHHHh-h------ccCCCEEEE-ChHH---------H
Confidence 3667776655 4578888999999999988 8888874 4444321 1 456675544 4433 1
Q ss_pred HHHHHHhcCCCCCCCCCCceEEEEE
Q 006697 160 RFYKWFTEGNDRGPWLQQLKFGVFG 184 (635)
Q Consensus 160 ~F~~~L~~~~~~~~~l~~~~~aVFG 184 (635)
..++.++.... -.+++++|.-
T Consensus 65 y~~~~ik~~~~----~~~ipV~vI~ 85 (108)
T 3nbm_A 65 SYYREMKVDAE----RLGIQIVATR 85 (108)
T ss_dssp GGHHHHHHHHT----TTTCEEEECC
T ss_pred HHHHHHHHHhh----hcCCcEEEeC
Confidence 12344443211 2368888886
No 107
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=46.49 E-value=2e+02 Score=27.49 Aligned_cols=137 Identities=11% Similarity=0.054 Sum_probs=71.9
Q ss_pred CCeEEEEEECCC---chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhh--ccCCeEEEEEecCCCCCCChh
Q 006697 83 KTKVTVFYGTQT---GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKL--KKETLAFFMVATYGDGEPTDN 157 (635)
Q Consensus 83 ~~~v~I~YgSqt---Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l--~~~~~vif~~sTyg~G~~p~n 157 (635)
...|.|+..+.. .--..+.+.+.+.+.+. |..+.+.+.++-......+...+ ...+.+|+.. +. .++
T Consensus 8 s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~-~~----~~~- 79 (288)
T 3gv0_A 8 TNVIALVLSVDEELMGFTSQMVFGITEVLSTT--QYHLVVTPHIHAKDSMVPIRYILETGSADGVIISK-IE----PND- 79 (288)
T ss_dssp CCEEEEECBCCCCSSCHHHHHHHHHHHHHTTS--SCEEEECCBSSGGGTTHHHHHHHHHTCCSEEEEES-CC----TTC-
T ss_pred CCEEEEEecCCccccHHHHHHHHHHHHHHHHc--CCEEEEecCCcchhHHHHHHHHHHcCCccEEEEec-CC----CCc-
Confidence 456777777655 45667777777778776 77777765543222222233333 2446666543 22 112
Q ss_pred HHHHHHHHhcCCCCCCCCCCceEEEEEecCc----ch--hHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHH
Q 006697 158 AARFYKWFTEGNDRGPWLQQLKFGVFGLGNR----QY--EHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAW 231 (635)
Q Consensus 158 a~~F~~~L~~~~~~~~~l~~~~~aVFGlGds----~Y--~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W 231 (635)
..++.+.+. +..+.+++.... .| -..-.+++.+-+.|.+.|.+++.=++ ++... ......
T Consensus 80 --~~~~~l~~~--------~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~-~~~~~---~~~~~R 145 (288)
T 3gv0_A 80 --PRVRFMTER--------NMPFVTHGRSDMGIEHAFHDFDNEAYAYEAVERLAQCGRKRIAVIV-PPSRF---SFHDHA 145 (288)
T ss_dssp --HHHHHHHHT--------TCCEEEESCCCSSCCCEEEEECHHHHHHHHHHHHHHTTCCEEEEEC-CCTTS---HHHHHH
T ss_pred --HHHHHHhhC--------CCCEEEECCcCCCCCCcEEEeCcHHHHHHHHHHHHHCCCCeEEEEc-CCccc---chHHHH
Confidence 245555542 344444443110 11 23345677788889999999886433 22221 222334
Q ss_pred HHHHHHHHHH
Q 006697 232 RELVWPELDQ 241 (635)
Q Consensus 232 ~~~l~~~L~~ 241 (635)
.+.+.+++.+
T Consensus 146 ~~gf~~~l~~ 155 (288)
T 3gv0_A 146 RKGFNRGIRD 155 (288)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4455555554
No 108
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=45.88 E-value=12 Score=34.41 Aligned_cols=57 Identities=18% Similarity=0.144 Sum_probs=39.2
Q ss_pred CCCceEEEEEecCcch--hHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHH
Q 006697 175 LQQLKFGVFGLGNRQY--EHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWR 232 (635)
Q Consensus 175 l~~~~~aVFGlGds~Y--~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~ 232 (635)
.+..+++|+-.||.-+ .-++..+..+.++|+++|++...-....|+ +.+.+.+.+|.
T Consensus 5 ~~~~rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~ 63 (164)
T 3pzy_A 5 MTTRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAI 63 (164)
T ss_dssp --CCEEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHH
Confidence 4567999999999886 456777889999999999987654444455 55555555553
No 109
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=44.71 E-value=16 Score=31.53 Aligned_cols=57 Identities=14% Similarity=0.164 Sum_probs=38.3
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchH-HHhhhccCCeEEEE
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQ-YEEKLKKETLAFFM 145 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~-~~~~l~~~~~vif~ 145 (635)
..-++|.|||+.+.+.+.++.+. ++ |.++.++++.-+.+=+.. +...+.+.+.++++
T Consensus 14 ~dv~iv~~Gs~~~~a~eA~~~L~----~~--Gi~v~vi~~r~~~P~d~~~l~~~~~~~~~vvvv 71 (118)
T 3ju3_A 14 ADITFVTWGSQKGPILDVIEDLK----EE--GISANLLYLKMFSPFPTEFVKNVLSSANLVIDV 71 (118)
T ss_dssp CSEEEEEEGGGHHHHHHHHHHHH----HT--TCCEEEEEECSSCSCCHHHHHHHHTTCSCCCCC
T ss_pred CCEEEEEECccHHHHHHHHHHHH----HC--CCceEEEEECeEecCCHHHHHHHHcCCCEEEEE
Confidence 45577889999999998887664 45 778899988766544422 33334455555544
No 110
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=42.79 E-value=2.2e+02 Score=27.07 Aligned_cols=140 Identities=9% Similarity=-0.020 Sum_probs=73.9
Q ss_pred CCCeEEEEEECCCch-HHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhc--cCCeEEEEEecCCCCCCChhH
Q 006697 82 GKTKVTVFYGTQTGT-AEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLK--KETLAFFMVATYGDGEPTDNA 158 (635)
Q Consensus 82 ~~~~v~I~YgSqtGt-te~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~--~~~~vif~~sTyg~G~~p~na 158 (635)
...+|.|+..+.+.. -..+.+.+.+.+.+. |..+.+.+.+.-.......+..+. ..+.+|+. ++. ++..
T Consensus 4 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~-~~~-----~~~~ 75 (291)
T 3l49_A 4 EGKTIGITAIGTDHDWDLKAYQAQIAEIERL--GGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQ-LGN-----LDVL 75 (291)
T ss_dssp TTCEEEEEESCCSSHHHHHHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEE-SSC-----HHHH
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHc--CCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEe-CCC-----hhhh
Confidence 355677777665543 256778888888877 788887765432211122333332 34556544 322 1234
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEEEecCc---ch--hHHHHHHHHHHHHHHH--CCCEEeecceeecCCCCchHHHHHH
Q 006697 159 ARFYKWFTEGNDRGPWLQQLKFGVFGLGNR---QY--EHFNKIGIVLDEELCK--QGGARLVPLGLGDDDQCIEDDFTAW 231 (635)
Q Consensus 159 ~~F~~~L~~~~~~~~~l~~~~~aVFGlGds---~Y--~~f~~~~k~ld~~L~~--lGa~~v~~~g~gD~~~~~e~~f~~W 231 (635)
...++.+.+. +..+.+++.... .| ...-.+++.+-++|.+ .|.+++.=+ .++.+ ......+
T Consensus 76 ~~~~~~~~~~--------~iPvV~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~~~i~~i-~~~~~---~~~~~~R 143 (291)
T 3l49_A 76 NPWLQKINDA--------GIPLFTVDTATPHAINNTTSNNYSIGAELALQMVADLGGKGNVLVF-NGFYS---VPVCKIR 143 (291)
T ss_dssp HHHHHHHHHT--------TCCEEEESCCCTTCSEEEEECHHHHHHHHHHHHHHHHTTCEEEEEE-CSCTT---SHHHHHH
T ss_pred HHHHHHHHHC--------CCcEEEecCCCCCcCceEecChHHHHHHHHHHHHHHcCCCceEEEE-eCCCC---CchHHHH
Confidence 4456666543 344544443211 11 2233456677778877 898887643 22222 1233445
Q ss_pred HHHHHHHHHH
Q 006697 232 RELVWPELDQ 241 (635)
Q Consensus 232 ~~~l~~~L~~ 241 (635)
.+.+..++.+
T Consensus 144 ~~gf~~~l~~ 153 (291)
T 3l49_A 144 YDQMKYVLEA 153 (291)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 5555566653
No 111
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=41.39 E-value=43 Score=32.93 Aligned_cols=101 Identities=11% Similarity=-0.068 Sum_probs=60.4
Q ss_pred CCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcC-c----hHHHhhhccCCeEEEEEecCCCCCCCh
Q 006697 82 GKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMD-D----EQYEEKLKKETLAFFMVATYGDGEPTD 156 (635)
Q Consensus 82 ~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~-~----~~~~~~l~~~~~vif~~sTyg~G~~p~ 156 (635)
.+++|+|- - .+.-|..+++.|++. |+.+..+.+=+...- + +..+..+.+++.+||.|+.-
T Consensus 13 ~g~~IlvT-----R-p~~~a~~l~~~L~~~--G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~na------- 77 (269)
T 3re1_A 13 SAWRLLLT-----R-PAEESAALARVLADA--GIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSKPA------- 77 (269)
T ss_dssp CCCEEEEC-----S-CHHHHHHHHHHHHTT--TCEEEECCCCEEEECCCHHHHHHHHHTGGGSSEEEECSHHH-------
T ss_pred CCCEEEEe-----C-ChHHHHHHHHHHHHC--CCCEEEcCCEEEecCCCcHHHHHHHHhccCCCEEEEECHHH-------
Confidence 45666652 2 234467788888877 776654433222111 1 11234567788888877644
Q ss_pred hHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeec
Q 006697 157 NAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVP 214 (635)
Q Consensus 157 na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~ 214 (635)
...|++.+.....+ +.++++++.| ..-.+.|++.|.+...+
T Consensus 78 -V~~~~~~l~~~~~~---~~~~~i~aVG-------------~~Ta~aL~~~G~~~~~~ 118 (269)
T 3re1_A 78 -ARLAIELIDEVWPQ---PPMQPWFSVG-------------SATGQILLDYGLDASWP 118 (269)
T ss_dssp -HHHHHHHHHHHCSS---CCCSCEEESS-------------HHHHHHHHHTTCCEECC
T ss_pred -HHHHHHHHHHhCCC---cccCEEEEEC-------------HHHHHHHHHcCCCcccC
Confidence 66677777653222 4557888887 45556788889876554
No 112
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=40.00 E-value=13 Score=34.65 Aligned_cols=57 Identities=21% Similarity=0.235 Sum_probs=38.4
Q ss_pred CCCceEEEEEecCcch-------hHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHH
Q 006697 175 LQQLKFGVFGLGNRQY-------EHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAW 231 (635)
Q Consensus 175 l~~~~~aVFGlGds~Y-------~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W 231 (635)
.+..+++|+-.||.-+ .-++..+..+.++|+++|++...-....|+.+.+.+.+.+|
T Consensus 13 ~~~~rv~IittGde~~~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a 76 (178)
T 2pjk_A 13 PKSLNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDA 76 (178)
T ss_dssp CCCCEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCcccccccccCCeEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHH
Confidence 6778999999999655 23566678899999999998665434445432333333333
No 113
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=39.02 E-value=19 Score=33.22 Aligned_cols=47 Identities=21% Similarity=0.317 Sum_probs=35.3
Q ss_pred CCCceEEEEEecCcchhH-------HHHHHHHHHHHHHHCCCEEeecceeecCC
Q 006697 175 LQQLKFGVFGLGNRQYEH-------FNKIGIVLDEELCKQGGARLVPLGLGDDD 221 (635)
Q Consensus 175 l~~~~~aVFGlGds~Y~~-------f~~~~k~ld~~L~~lGa~~v~~~g~gD~~ 221 (635)
.+.++++|+-.||+.|+. ....+..|.++|+++|++.+.-....|+.
T Consensus 13 ~~~~~v~iitvsd~~~~~~~~~g~i~D~ng~~L~~~L~~~G~~v~~~~iV~Dd~ 66 (178)
T 3iwt_A 13 PKSLNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDK 66 (178)
T ss_dssp CCCCEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCH
T ss_pred CCCCEEEEEEEcCCCccccccCCCCCcchHHHHHHHHHHCCCEEEEEEEeCCCH
Confidence 467899999999987731 24567889999999999876655555553
No 114
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=38.82 E-value=43 Score=32.52 Aligned_cols=89 Identities=12% Similarity=-0.032 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhhhCCceEEEEeCCCCCcCc-----hHHHhhhccCCeEEEEEecCCCCCCChhHHHHHHHHhcCCCCCCC
Q 006697 100 FAKALAEEIKARYEKAAVKVVDLDDYAMDD-----EQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPW 174 (635)
Q Consensus 100 ~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~-----~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~~L~~~~~~~~~ 174 (635)
-+..+.+.|++. |+.+..+.+=+..... ...+..+..++.+||.|+.- ...|++.+.....+
T Consensus 17 ~~~~l~~~L~~~--G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~~a--------V~~~~~~l~~~~~~--- 83 (254)
T 4es6_A 17 ECAALAASLGEA--GVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKPA--------ARLGLERLDRYWPQ--- 83 (254)
T ss_dssp HHHHHHHHHHHT--TCEEEECCSCEEEECCCCHHHHHHHHTGGGCSEEEECSHHH--------HHHHHHHHHHHCSS---
T ss_pred HhHHHHHHHHHC--CCcEEEeCCEEEeeCcChHHHHHHHHhccCCCEEEEECHHH--------HHHHHHHHHHhCCC---
Confidence 356677777777 7665544332211110 11234467788888877644 66677877653211
Q ss_pred CCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeec
Q 006697 175 LQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVP 214 (635)
Q Consensus 175 l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~ 214 (635)
++++++++.| ..-.+.|++.|.+...+
T Consensus 84 ~~~~~i~aVG-------------~~Ta~~L~~~G~~~~~~ 110 (254)
T 4es6_A 84 PPQQTWCSVG-------------AATAAILEAYGLDVTYP 110 (254)
T ss_dssp CCSCEEEESS-------------HHHHHHHHHHTCCEECC
T ss_pred cccCEEEEEC-------------HHHHHHHHHcCCCcccC
Confidence 4557888777 44556677789876543
No 115
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=37.46 E-value=29 Score=29.39 Aligned_cols=34 Identities=9% Similarity=0.228 Sum_probs=29.1
Q ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEE
Q 006697 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKV 119 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v 119 (635)
.++|+++.+|--||+ -+|++|.+.+.+. |+++++
T Consensus 4 ~mkIlvvC~~G~~TS-ll~~kl~~~~~~~--gi~~~i 37 (109)
T 2l2q_A 4 SMNILLVCGAGMSTS-MLVQRIEKYAKSK--NINATI 37 (109)
T ss_dssp CEEEEEESSSSCSSC-HHHHHHHHHHHHH--TCSEEE
T ss_pred ceEEEEECCChHhHH-HHHHHHHHHHHHC--CCCeEE
Confidence 467999999999999 9999999999888 765443
No 116
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=35.31 E-value=2.6e+02 Score=26.54 Aligned_cols=141 Identities=9% Similarity=0.046 Sum_probs=76.0
Q ss_pred CCeEEEEEECCCc-hHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhc--cCCeEEEEEecCCCCCCChhHH
Q 006697 83 KTKVTVFYGTQTG-TAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLK--KETLAFFMVATYGDGEPTDNAA 159 (635)
Q Consensus 83 ~~~v~I~YgSqtG-tte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~--~~~~vif~~sTyg~G~~p~na~ 159 (635)
.+.|.|+..+.+. --..+.+.+.+.+.+. |..+.+++...-.......+..+. ..+.+|+..... ..++...
T Consensus 15 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~---~~~~~~~ 89 (298)
T 3tb6_A 15 NKTIGVLTTYISDYIFPSIIRGIESYLSEQ--GYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKS---ALQTPNI 89 (298)
T ss_dssp CCEEEEEESCSSSTTHHHHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSST---TSCCTTH
T ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHHHC--CCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccc---cccCCcH
Confidence 3678777776554 3567788888888887 888888766532211222334343 345555543222 1122223
Q ss_pred HHHHHHhcCCCCCCCCCCceEEEEEecCc----ch--hHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHH
Q 006697 160 RFYKWFTEGNDRGPWLQQLKFGVFGLGNR----QY--EHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRE 233 (635)
Q Consensus 160 ~F~~~L~~~~~~~~~l~~~~~aVFGlGds----~Y--~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~ 233 (635)
..++.+... +..+.+++.... .| ...-.+++.+-++|.++|.+++.-++ +... .......+
T Consensus 90 ~~~~~~~~~--------~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~~i~~i~-~~~~----~~~~~R~~ 156 (298)
T 3tb6_A 90 GYYLNLEKN--------GIPFAMINASYAELAAPSFTLDDVKGGMMAAEHLLSLGHTHMMGIF-KADD----TQGVKRMN 156 (298)
T ss_dssp HHHHHHHHT--------TCCEEEESSCCTTCSSCEEEECHHHHHHHHHHHHHHTTCCSEEEEE-ESSS----HHHHHHHH
T ss_pred HHHHHHHhc--------CCCEEEEecCcCCCCCCEEEeCcHHHHHHHHHHHHHCCCCcEEEEc-CCCC----ccHHHHHH
Confidence 356666553 344555543111 11 23345667778888899998876333 2221 23334455
Q ss_pred HHHHHHHH
Q 006697 234 LVWPELDQ 241 (635)
Q Consensus 234 ~l~~~L~~ 241 (635)
.+.++|.+
T Consensus 157 gf~~~l~~ 164 (298)
T 3tb6_A 157 GFIQAHRE 164 (298)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55566654
No 117
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=35.02 E-value=27 Score=32.14 Aligned_cols=57 Identities=19% Similarity=0.211 Sum_probs=38.2
Q ss_pred CCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHH
Q 006697 175 LQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAW 231 (635)
Q Consensus 175 l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W 231 (635)
.+.++++|+-.||.--.-++..+..+.++|+++|++...-....|+.+.+.+.+..|
T Consensus 11 ~~~~rv~Ii~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~ 67 (169)
T 1y5e_A 11 PKEVRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAG 67 (169)
T ss_dssp -CCCEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHH
T ss_pred ccCCEEEEEEEcCccCeeccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHH
Confidence 467899999999987444556677889999999998665444445533333444444
No 118
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=34.78 E-value=1.2e+02 Score=32.40 Aligned_cols=112 Identities=11% Similarity=-0.012 Sum_probs=62.3
Q ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhccCCeEEEEEecCCC---------CC-
Q 006697 84 TKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGD---------GE- 153 (635)
Q Consensus 84 ~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~---------G~- 153 (635)
.+|.|+ |+.. ...+.+|.+.|++. |+++..+- .+-..++ +..+....+.+.+++.++. |.
T Consensus 197 ~~vnil-G~~~---~~~~~ei~~lL~~~--Gi~v~~~~-~~~~~~e---l~~~~~A~~ni~~~~~~~~~A~~Le~~~giP 266 (460)
T 2xdq_A 197 PPLVLF-GSLP---DPVVTQLTLELKKQ--GIKVSGWL-PAKRYTE---LPVIDEGYYVAGVNPFLSRTATTLIRRRKCQ 266 (460)
T ss_dssp CCEEEE-SCCC---HHHHHHHHHHHGGG--TCCEEEEE-SCSSGGG---CCCCCTTCEEEESSTTCHHHHHHHHHTTCCE
T ss_pred CcEEEE-EecC---ccHHHHHHHHHHHc--CCeEEEEe-CCCCHHH---HHccccCcEEEEcCHhHHHHHHHHHHHcCCC
Confidence 356655 7753 55567888888877 77776541 1222333 2234455666665555421 11
Q ss_pred -----CC---hhHHHHHHHHhcCCCC-------------------CCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHH
Q 006697 154 -----PT---DNAARFYKWFTEGNDR-------------------GPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCK 206 (635)
Q Consensus 154 -----~p---~na~~F~~~L~~~~~~-------------------~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~ 206 (635)
.| ++..+|++.|.+.... ...+.|++++|||=++..+ -+.+.|.+
T Consensus 267 ~~~~~~P~G~~~T~~~Lr~ia~~~g~~~e~i~~e~~~~~~~l~~~~~~l~GKrv~i~g~~~~~~--------~la~~L~e 338 (460)
T 2xdq_A 267 LITAPFPIGPDGTRTWIEQICATFGIQPQGLAEREAETWQKLSDYLELVRGKSVFFMGDNLLEI--------SLARFLIR 338 (460)
T ss_dssp EECCCCSBHHHHHHHHHHHHHHHTTCCCCSCHHHHHHHHHTTHHHHHHHTTCEEEECCCSSCHH--------HHHHHHHH
T ss_pred ceecCcCccHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHHHHHhcCCEEEEECCchHHH--------HHHHHHHH
Confidence 11 3444455554432110 0237899999997443333 45566778
Q ss_pred CCCEEee
Q 006697 207 QGGARLV 213 (635)
Q Consensus 207 lGa~~v~ 213 (635)
+|++.+.
T Consensus 339 lGm~vv~ 345 (460)
T 2xdq_A 339 CGMRVLE 345 (460)
T ss_dssp TTCEEEE
T ss_pred CCCEEEE
Confidence 9998876
No 119
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=34.38 E-value=1.6e+02 Score=26.51 Aligned_cols=126 Identities=12% Similarity=-0.015 Sum_probs=67.8
Q ss_pred EEEEEECCCchHHHHHHHHHHHHHhhhCCceEEEEeCCC-CCcCchHHHhhhccCCeEEEEEecCCCCCCChhHHHHHHH
Q 006697 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDD-YAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKW 164 (635)
Q Consensus 86 v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~-~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~~ 164 (635)
..|+-++.-|..-.+-..+...+-+.. | .+++++.- ...++ +...+.+.+.-+++.|+. .+.-.+.+.++.+.
T Consensus 19 ~~vlla~~~gd~HdiG~~~va~~l~~~-G--~eVi~lG~~~p~e~--lv~aa~~~~~diV~lS~~-~~~~~~~~~~~i~~ 92 (161)
T 2yxb_A 19 YKVLVAKMGLDGHDRGAKVVARALRDA-G--FEVVYTGLRQTPEQ--VAMAAVQEDVDVIGVSIL-NGAHLHLMKRLMAK 92 (161)
T ss_dssp CEEEEEEESSSSCCHHHHHHHHHHHHT-T--CEEECCCSBCCHHH--HHHHHHHTTCSEEEEEES-SSCHHHHHHHHHHH
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHC-C--CEEEECCCCCCHHH--HHHHHHhcCCCEEEEEee-chhhHHHHHHHHHH
Confidence 345567777777667665555553333 5 55667653 34433 555565555444444444 23344667778888
Q ss_pred HhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHHHHHHH
Q 006697 165 FTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPE 238 (635)
Q Consensus 165 L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~l~~~ 238 (635)
|+... +.+.++.|=|- .. . ... +.+++.|+..++..+ ....+...|..+++..
T Consensus 93 L~~~g-----~~~i~v~vGG~---~~---~---~~~-~~l~~~G~d~v~~~~------~~~~~~~~~~~~~~~~ 145 (161)
T 2yxb_A 93 LRELG-----ADDIPVVLGGT---IP---I---PDL-EPLRSLGIREIFLPG------TSLGEIIEKVRKLAEE 145 (161)
T ss_dssp HHHTT-----CTTSCEEEEEC---CC---H---HHH-HHHHHTTCCEEECTT------CCHHHHHHHHHHHHHH
T ss_pred HHhcC-----CCCCEEEEeCC---Cc---h---hcH-HHHHHCCCcEEECCC------CCHHHHHHHHHHHHHH
Confidence 87743 33455555441 11 1 112 357789998655322 1223445666666554
No 120
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=34.26 E-value=1.7e+02 Score=28.48 Aligned_cols=43 Identities=16% Similarity=0.209 Sum_probs=31.4
Q ss_pred CCeEEEEEECCCchHHH---HHHHHHHHHHhhhCCceEEEEeCCCCCc
Q 006697 83 KTKVTVFYGTQTGTAEG---FAKALAEEIKARYEKAAVKVVDLDDYAM 127 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~---~A~~l~~~l~~~~~g~~~~v~dl~~~~~ 127 (635)
+++|.|++|.++.--+. .+..+.+.+++. |+++.++|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~--G~~v~~~~~~~~~~ 47 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREG--GIDAYPVDPKEVDV 47 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT--TCEEEEECTTTSCG
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHC--CCeEEEEecCchHH
Confidence 47899999877653332 566788888888 88898888876543
No 121
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=33.11 E-value=39 Score=32.53 Aligned_cols=46 Identities=9% Similarity=0.187 Sum_probs=35.8
Q ss_pred CCCCCeeEEEEEeEEecCCCCCCceEEEEEEe-c-CC---CCccCCCCeEEEeccC
Q 006697 290 DIHHPCRVNVAVRRELHKPDSDRSCIHLEFDV-S-GT---GITYETGDHVGVYVEN 340 (635)
Q Consensus 290 ~~~~p~~a~V~~~~~L~~~~~~r~~~hie~di-~-~~---~l~Y~~GD~l~I~p~N 340 (635)
....++.++|+..+.++. +++.++|.. + +. ...|+||.|+.|..++
T Consensus 6 ~~~~~~~~~V~~~~~~~~-----~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~ 56 (250)
T 1tvc_A 6 GEVGSFEAEVVGLNWVSS-----NTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPG 56 (250)
T ss_dssp CCSSEEEEEBCCCEEEET-----TEEEEEECSSTTSSSSSCCSCCSCCEEEECTTS
T ss_pred CCcceEEEEEEEEEEcCC-----CeEEEEEEecCCCCcccccCcCCCcEEEEEeCC
Confidence 344567789998888863 688999987 6 43 5889999999998754
No 122
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=32.08 E-value=54 Score=31.40 Aligned_cols=81 Identities=15% Similarity=0.195 Sum_probs=47.9
Q ss_pred HHHHHHHHhhhCCceEEEEeCCCCCc--CchHHHhhhccCCeEEEEEecCCCCCCChhHHHHHHHHhcCCCCCCCCCCce
Q 006697 102 KALAEEIKARYEKAAVKVVDLDDYAM--DDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLK 179 (635)
Q Consensus 102 ~~l~~~l~~~~~g~~~~v~dl~~~~~--~~~~~~~~l~~~~~vif~~sTyg~G~~p~na~~F~~~L~~~~~~~~~l~~~~ 179 (635)
..+++.|++. |+.+..+.+=+... +.+..+..+.+++.+||.|+.- .+.|++.+.. . +.+++
T Consensus 14 ~~l~~~L~~~--G~~~~~~P~i~i~~~~~~~~~~~~l~~~d~viftS~~a--------V~~~~~~l~~-~-----l~~~~ 77 (240)
T 3mw8_A 14 AAMASALDAL--AIPYLVEPLLSVEAAAVTQAQLDELSRADILIFISTSA--------VSFATPWLKD-Q-----WPKAT 77 (240)
T ss_dssp HHHHHHHHHH--TCCEEECCSCEEEECCCCHHHHHHHTTCSEEEECSHHH--------HHHHHHHHTT-C-----CCSSE
T ss_pred HHHHHHHHHC--CCcEEEeCcEEEeccccHHHHHHHhcCCCEEEEECHHH--------HHHHHHHHHh-h-----CcCCe
Confidence 4455566656 66554332211110 1122345577788888877644 5667777753 1 56788
Q ss_pred EEEEEecCcchhHHHHHHHHHHHHHHHCCCEE
Q 006697 180 FGVFGLGNRQYEHFNKIGIVLDEELCKQGGAR 211 (635)
Q Consensus 180 ~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~ 211 (635)
+++.| ..-.+.|++.|.+.
T Consensus 78 ~~aVG-------------~~Ta~~L~~~G~~~ 96 (240)
T 3mw8_A 78 YYAVG-------------DATADALALQGITA 96 (240)
T ss_dssp EEESS-------------HHHHHHHHHTTCCC
T ss_pred EEEEC-------------HHHHHHHHHcCCCC
Confidence 88887 45567888889865
No 123
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=30.47 E-value=2.5e+02 Score=26.74 Aligned_cols=137 Identities=9% Similarity=0.021 Sum_probs=70.2
Q ss_pred CCeEEEEEEC--CCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhcc--CCeEEEEEecCCCCCCChhH
Q 006697 83 KTKVTVFYGT--QTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKK--ETLAFFMVATYGDGEPTDNA 158 (635)
Q Consensus 83 ~~~v~I~YgS--qtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~~--~~~vif~~sTyg~G~~p~na 158 (635)
...|.|+..+ ...--..+.+.+.+.+.+. |..+.+++...-......++..+.. .+.+|+. ++. .+.
T Consensus 11 ~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~-~~~------~~~ 81 (289)
T 3g85_A 11 KPTIALYWSSDISVNIISRFLRGLQSKLAKQ--NYNYNVVICPYKTDCLHLEKGISKENSFDAAIIA-NIS------NYD 81 (289)
T ss_dssp CCEEEEEEETTSCGGGHHHHHHHHHHHHHHT--TTCSEEEEEEECTTCGGGCGGGSTTTCCSEEEES-SCC------HHH
T ss_pred CceEEEEeccccchHHHHHHHHHHHHHHHHc--CCeEEEEecCCCchhHHHHHHHHhccCCCEEEEe-cCC------ccc
Confidence 5668888773 3344577888888888877 7777666432111111123333433 3555553 221 122
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEEEecCcc--h--hHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHHH
Q 006697 159 ARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQ--Y--EHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWREL 234 (635)
Q Consensus 159 ~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~--Y--~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~~ 234 (635)
..+.+.. . .+..+.+++.-... | ...-.+++.+-+.|.+.|.+++.=++ ++... .......+.
T Consensus 82 ~~~~~~~-~--------~~iPvV~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~i~~i~-~~~~~---~~~~~R~~g 148 (289)
T 3g85_A 82 LEYLNKA-S--------LTLPIILFNRLSNKYSSVNVDNYKMGEKASLLFAKKRYKSAAAIL-TESLN---DAMDNRNKG 148 (289)
T ss_dssp HHHHHHC-C--------CSSCEEEESCCCSSSEEEEECHHHHHHHHHHHHHHTTCCBCEEEE-CCCSS---HHHHHHHHH
T ss_pred HHHHHhc-c--------CCCCEEEECCCCCCCCEEEeCHHHHHHHHHHHHHHcCCCEEEEEe-CCccc---ccHHHHHHH
Confidence 2232221 1 24556555532211 1 23345677888889899999876433 32221 222333455
Q ss_pred HHHHHHH
Q 006697 235 VWPELDQ 241 (635)
Q Consensus 235 l~~~L~~ 241 (635)
+.+++.+
T Consensus 149 f~~~l~~ 155 (289)
T 3g85_A 149 FIETCHK 155 (289)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5556654
No 124
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=30.22 E-value=71 Score=27.82 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=33.4
Q ss_pred CCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCc-e--EEEEeCCCC
Q 006697 82 GKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKA-A--VKVVDLDDY 125 (635)
Q Consensus 82 ~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~-~--~~v~dl~~~ 125 (635)
.+++|+++.++--||+.-++.+|.+.+.+. ++ . +...++.++
T Consensus 12 ~~kkIlvVC~sGmgTS~ml~~klkk~~~e~--gi~~~~V~~~~i~e~ 56 (125)
T 1vkr_A 12 HVRKIIVACDAGMGSSAMGAGVLRKKIQDA--GLSQISVTNSAINNL 56 (125)
T ss_dssp CCCEEEECCSSSSHHHHHHHHHHHHHHHHT--TCTTSEEEECCTTCC
T ss_pred cccEEEEECCCcHHHHHHHHHHHHHHHHHC--CCceEEEEEeeHHHC
Confidence 467899999999999999999999999877 65 4 344455554
No 125
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=30.15 E-value=80 Score=30.93 Aligned_cols=42 Identities=5% Similarity=0.169 Sum_probs=33.6
Q ss_pred CeeEEEEEeEEecCCCCCCceEEEEEEecC-CCCccCCCCeEEEeccC
Q 006697 294 PCRVNVAVRRELHKPDSDRSCIHLEFDVSG-TGITYETGDHVGVYVEN 340 (635)
Q Consensus 294 p~~a~V~~~~~L~~~~~~r~~~hie~di~~-~~l~Y~~GD~l~I~p~N 340 (635)
.+.++|+..+.++. +++.++|..++ ..+.|+||.||.|..+.
T Consensus 9 ~~~~~V~~~~~~t~-----~~~~l~l~~~~~~~~~~~pGQ~v~l~~p~ 51 (290)
T 2r6h_A 9 EWECEVLSNKNVST-----FIKEFVVKLPEGETMNFKSGSYAQIKIPK 51 (290)
T ss_dssp EEEEEEEEEEESSS-----SEEEEEEECSTTCCCCCCTTCEEEEEECS
T ss_pred EEEEEEEEeeecCC-----CeEEEEEEcCCCCccccCCCceEEEEccc
Confidence 35688998888863 68899998875 46789999999997654
No 126
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=30.00 E-value=3.8e+02 Score=25.78 Aligned_cols=139 Identities=10% Similarity=0.011 Sum_probs=71.1
Q ss_pred CCeEEEEEECCC-chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcC-chHHHhhhc--cCCeEEEEEecCCCCCCChhH
Q 006697 83 KTKVTVFYGTQT-GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMD-DEQYEEKLK--KETLAFFMVATYGDGEPTDNA 158 (635)
Q Consensus 83 ~~~v~I~YgSqt-Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~-~~~~~~~l~--~~~~vif~~sTyg~G~~p~na 158 (635)
+..|.|+..+.+ .--..+.+.+.+.+.+. |..+.+.+.+. +.+ ....+..+. ..+.+|+..... +..
T Consensus 2 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~--g~~~~~~~~~~-~~~~~~~~i~~l~~~~vdgiIi~~~~~------~~~ 72 (313)
T 3m9w_A 2 EVKIGMAIDDLRLERWQKDRDIFVKKAESL--GAKVFVQSANG-NEETQMSQIENMINRGVDVLVIIPYNG------QVL 72 (313)
T ss_dssp -CEEEEEESCCSSSTTHHHHHHHHHHHHHT--SCEEEEEECTT-CHHHHHHHHHHHHHTTCSEEEEECSST------TSC
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHc--CCEEEEECCCC-CHHHHHHHHHHHHHcCCCEEEEeCCCh------hhh
Confidence 345666665533 33456777888888877 78887776632 222 112333343 345555543322 222
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEEEecCc-----ch--hHHHHHHHHHHHHHH-HCCCEEeecceeecCCCCchHHHHH
Q 006697 159 ARFYKWFTEGNDRGPWLQQLKFGVFGLGNR-----QY--EHFNKIGIVLDEELC-KQGGARLVPLGLGDDDQCIEDDFTA 230 (635)
Q Consensus 159 ~~F~~~L~~~~~~~~~l~~~~~aVFGlGds-----~Y--~~f~~~~k~ld~~L~-~lGa~~v~~~g~gD~~~~~e~~f~~ 230 (635)
...++.+.+. +.++.+++.... .| ...-.+++.+-+.|. ++|.+++.=+ .++... .....
T Consensus 73 ~~~~~~~~~~--------~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~G~~~i~~i-~g~~~~---~~~~~ 140 (313)
T 3m9w_A 73 SNVVKEAKQE--------GIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLM-GGSPVD---NNAKL 140 (313)
T ss_dssp HHHHHHHHTT--------TCEEEEESSCCTTSCCSEEEEECHHHHHHHHHHHHHHHCSSEEEEEE-ESCTTC---HHHHH
T ss_pred HHHHHHHHHC--------CCeEEEECCcCCCCCceEEEecCHHHHHHHHHHHHHHhCCCCcEEEE-ECCCCC---ccHHH
Confidence 3356666542 455555543211 12 123345666667777 8999887633 233221 22334
Q ss_pred HHHHHHHHHHHh
Q 006697 231 WRELVWPELDQL 242 (635)
Q Consensus 231 W~~~l~~~L~~~ 242 (635)
+.+.+.++|.+.
T Consensus 141 R~~Gf~~~l~~~ 152 (313)
T 3m9w_A 141 FRAGQMKVLKPY 152 (313)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 445555666553
No 127
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=29.15 E-value=26 Score=29.78 Aligned_cols=33 Identities=12% Similarity=0.160 Sum_probs=28.6
Q ss_pred CCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCce
Q 006697 82 GKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAA 116 (635)
Q Consensus 82 ~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~ 116 (635)
.+++|+++.++--||+.-++.+|.+.+.+. |++
T Consensus 17 ~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~--gi~ 49 (110)
T 3czc_A 17 SMVKVLTACGNGMGSSMVIKMKVENALRQL--GVS 49 (110)
T ss_dssp -CEEEEEECCCCHHHHHHHHHHHHHHHHHT--TCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHHHHHHc--CCC
Confidence 367899999999999999999999999887 665
No 128
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=28.71 E-value=30 Score=32.19 Aligned_cols=55 Identities=18% Similarity=0.051 Sum_probs=38.8
Q ss_pred ceEEEEEecCcch--hHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHH
Q 006697 178 LKFGVFGLGNRQY--EHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWR 232 (635)
Q Consensus 178 ~~~aVFGlGds~Y--~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~ 232 (635)
++++|+-.||.-. .-++..+..+.++|+++|++...-...+|+.+.+.+.+..|.
T Consensus 4 ~~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~ 60 (172)
T 3kbq_A 4 KNASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVAL 60 (172)
T ss_dssp CEEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHH
T ss_pred CEEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHH
Confidence 6899999998764 345566778899999999986654455565444555555554
No 129
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=27.78 E-value=95 Score=29.20 Aligned_cols=40 Identities=8% Similarity=0.207 Sum_probs=31.9
Q ss_pred eeEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccC
Q 006697 295 CRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVEN 340 (635)
Q Consensus 295 ~~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N 340 (635)
+.++|+..+.++. +++.++|..++ .+.|+||.++.|..++
T Consensus 3 ~~~~V~~~~~~~~-----~~~~l~l~~~~-~~~~~pGq~v~l~~~~ 42 (232)
T 1qfj_A 3 LSCKVTSVEAITD-----TVYRVRIVPDA-AFSFRAGQYLMVVMDE 42 (232)
T ss_dssp EEEEEEEEEESSS-----SCEEEEEEESS-CCCCCTTCEEEEESSS
T ss_pred eEEEEEEEEecCC-----CEEEEEEecCC-CCCcCCCCEEEEECCC
Confidence 4578888888863 57888888764 6899999999998753
No 130
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=26.73 E-value=2.7e+02 Score=26.11 Aligned_cols=115 Identities=12% Similarity=0.102 Sum_probs=60.7
Q ss_pred CeEEEEEECCCc-hHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhc--cCCeEEEEEecCCCCCCChhHHH
Q 006697 84 TKVTVFYGTQTG-TAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLK--KETLAFFMVATYGDGEPTDNAAR 160 (635)
Q Consensus 84 ~~v~I~YgSqtG-tte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~--~~~~vif~~sTyg~G~~p~na~~ 160 (635)
..|.|+..+.+. --..+.+.+.+.+++. |..+.+++.++-......++..+. ..+.+|+. ++.... + .
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~-~~~~~~---~---~ 73 (272)
T 3o74_A 3 RTLGFILPDLENPSYARIAKQLEQGARAR--GYQLLIASSDDQPDSERQLQQLFRARRCDALFVA-SCLPPE---D---D 73 (272)
T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEC-CCCCSS---C---C
T ss_pred eEEEEEeCCCcChhHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEe-cCcccc---H---H
Confidence 456677666543 3466777788888877 788887766532111122333343 34555553 332111 1 2
Q ss_pred HHHHHhcCCCCCCCCCCceEEEEEecCc----ch--hHHHHHHHHHHHHHHHCCCEEeecc
Q 006697 161 FYKWFTEGNDRGPWLQQLKFGVFGLGNR----QY--EHFNKIGIVLDEELCKQGGARLVPL 215 (635)
Q Consensus 161 F~~~L~~~~~~~~~l~~~~~aVFGlGds----~Y--~~f~~~~k~ld~~L~~lGa~~v~~~ 215 (635)
.++.+.+. +.++.+++.... .| ...-.+++.+-+.|.+.|.+++.=+
T Consensus 74 ~~~~~~~~--------~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~~i~~i 126 (272)
T 3o74_A 74 SYRELQDK--------GLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLLSSAPRSIALI 126 (272)
T ss_dssp HHHHHHHT--------TCCEEEESSCCCTTTCEEEEECHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHc--------CCCEEEEccCCCccccCEEEEchHHHHHHHHHHHHHCCCcEEEEE
Confidence 34555442 334444442111 11 1233456777788889999887643
No 131
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=26.67 E-value=37 Score=32.17 Aligned_cols=55 Identities=20% Similarity=0.183 Sum_probs=33.7
Q ss_pred CceEEEEEecCcch--hHHHHHHHHHHHHHHHCCCE--EeecceeecCCCCchHHHHHH
Q 006697 177 QLKFGVFGLGNRQY--EHFNKIGIVLDEELCKQGGA--RLVPLGLGDDDQCIEDDFTAW 231 (635)
Q Consensus 177 ~~~~aVFGlGds~Y--~~f~~~~k~ld~~L~~lGa~--~v~~~g~gD~~~~~e~~f~~W 231 (635)
..+++|+-.||.-+ .-++..+..|.++|+++|++ .+.-....|+.+.+.+.+..|
T Consensus 3 ~~rv~IIttGdEl~~G~i~D~n~~~L~~~L~~~G~~~~v~~~~iV~Dd~~~I~~al~~a 61 (195)
T 1di6_A 3 TLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCEL 61 (195)
T ss_dssp CEEEEEEEEECC-------CCHHHHHHHHHHHHBCSCEEEEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCCCeEEchHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHH
Confidence 46899999999987 45666778899999999987 333333345432334444444
No 132
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=26.18 E-value=75 Score=30.83 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=32.7
Q ss_pred eEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccCC
Q 006697 296 RVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENC 341 (635)
Q Consensus 296 ~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N~ 341 (635)
.++|+..+.++. +++.++|..++....|+||.|+.|..++.
T Consensus 7 ~~~V~~~~~~t~-----~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~ 47 (262)
T 1ep3_B 7 MMTVVSQREVAY-----NIFEMVLKGTLVDEMDLPGQFLHLAVPNG 47 (262)
T ss_dssp EEEEEEEEEEET-----TEEEEEEESGGGGGCCSTTCEEEECCSCT
T ss_pred ceEEEEEEEecC-----CEEEEEEEcCcccccCCCCceEEEEcCCC
Confidence 588998888863 68899998775346899999999987653
No 133
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=25.85 E-value=1.1e+02 Score=29.67 Aligned_cols=43 Identities=14% Similarity=0.278 Sum_probs=33.5
Q ss_pred CCCeeEEEEEeEEecCCCCCCceEEEEEEecCC--CCccCCCCeEEEecc
Q 006697 292 HHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGT--GITYETGDHVGVYVE 339 (635)
Q Consensus 292 ~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~--~l~Y~~GD~l~I~p~ 339 (635)
...+.++|+..+.++. +++.++|..++. .+.|+||.|+.|..+
T Consensus 10 ~~~~~~~v~~~~~~~~-----~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~ 54 (270)
T 2cnd_A 10 RGRIHCRLVAKKELSR-----DVRLFRFSLPSPDQVLGLPIGKHIFVCAT 54 (270)
T ss_dssp -CCEEEEEEEEEEEET-----TEEEEEEECSSTTCCCCCCTTCEEEEEEE
T ss_pred CceEEEEEEEEEEeCC-----CeEEEEEECCCCccccCCCCCCEEEEEee
Confidence 4456789999999874 588888987753 478999999999754
No 134
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=25.62 E-value=4.4e+02 Score=25.10 Aligned_cols=136 Identities=8% Similarity=0.057 Sum_probs=73.2
Q ss_pred CCeEEEEEE----CC-CchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhc--cCCeEEEEEecCCCCCCC
Q 006697 83 KTKVTVFYG----TQ-TGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLK--KETLAFFMVATYGDGEPT 155 (635)
Q Consensus 83 ~~~v~I~Yg----Sq-tGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~--~~~~vif~~sTyg~G~~p 155 (635)
...|.|+.. +. ..--..+.+.+.+.+.+. |..+.+.+.++ ......++..+. ..+.+|+..+.. +
T Consensus 6 s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~--g~~~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~~~-----~ 77 (294)
T 3qk7_A 6 TDAIALAYPSRPRVLNNSTFLEMISWIGIELGKR--GLDLLLIPDEP-GEKYQSLIHLVETRRVDALIVAHTQP-----E 77 (294)
T ss_dssp CCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHT--TCEEEEEEECT-TCCCHHHHHHHHHTCCSEEEECSCCS-----S
T ss_pred cceEEEEecCCCccccChhHHHHHHHHHHHHHHC--CCEEEEEeCCC-hhhHHHHHHHHHcCCCCEEEEeCCCC-----C
Confidence 456777776 22 223456777788888877 88888887765 333333444443 346666543332 1
Q ss_pred hhHHHHHHHHhcCCCCCCCCCCceEEEEEecC--c--ch--hHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHH
Q 006697 156 DNAARFYKWFTEGNDRGPWLQQLKFGVFGLGN--R--QY--EHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFT 229 (635)
Q Consensus 156 ~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGd--s--~Y--~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~ 229 (635)
+ ..++.+... +..+.+++-.. . .| -..-.+++..-+.|.++|.+++.=++ +.... ....
T Consensus 78 ~---~~~~~l~~~--------~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~-~~~~~---~~~~ 142 (294)
T 3qk7_A 78 D---FRLQYLQKQ--------NFPFLALGRSHLPKPYAWFDFDNHAGASLAVKRLLELGHQRIAFVS-TDARI---SYVD 142 (294)
T ss_dssp C---HHHHHHHHT--------TCCEEEESCCCCSSCCEEEEECHHHHHHHHHHHHHHTTCCCEEEEE-ESSCC---HHHH
T ss_pred h---HHHHHHHhC--------CCCEEEECCCCCCCCCCEEEcChHHHHHHHHHHHHHCCCceEEEEe-CCccc---chHH
Confidence 1 245555542 34455554311 0 11 22335567777888899999886433 33221 2233
Q ss_pred HHHHHHHHHHHH
Q 006697 230 AWRELVWPELDQ 241 (635)
Q Consensus 230 ~W~~~l~~~L~~ 241 (635)
...+.+..+|.+
T Consensus 143 ~R~~Gf~~al~~ 154 (294)
T 3qk7_A 143 QRLQGYVQTMSE 154 (294)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 334455555554
No 135
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=25.41 E-value=1.1e+02 Score=29.56 Aligned_cols=43 Identities=9% Similarity=0.170 Sum_probs=33.6
Q ss_pred CCCeeEEEEEeEEecCCCCCCceEEEEEEecCC--CCccCCCCeEEEecc
Q 006697 292 HHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGT--GITYETGDHVGVYVE 339 (635)
Q Consensus 292 ~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~--~l~Y~~GD~l~I~p~ 339 (635)
...+.++|+..+.++. +++.++|.+++. .+.|+||.|+.|..+
T Consensus 14 ~~~~~~~V~~~~~~~~-----~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~ 58 (275)
T 1umk_A 14 DIKYPLRLIDREIISH-----DTRRFRFALPSPQHILGLPVGQHIYLSAR 58 (275)
T ss_dssp TCCEEEEEEEEEECSS-----SEEEEEEECSSTTCBCCCCTTCEEEEEEE
T ss_pred CccEEEEEEEEEEcCC-----CeEEEEEEcCCcccccCCCCCcEEEEEEe
Confidence 4556789998888863 678888887753 478999999999864
No 136
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=25.30 E-value=4.6e+02 Score=26.08 Aligned_cols=49 Identities=12% Similarity=0.055 Sum_probs=34.7
Q ss_pred hHHHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHHHHHHHHHHHHHHHCCCEEeecc
Q 006697 157 NAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPL 215 (635)
Q Consensus 157 na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~v~~~ 215 (635)
.+....+++.. ...++++++.- .|.+.....+.+.+.+++.|.+.+...
T Consensus 126 ~~~~~~~~~~~-------~g~k~vaii~~---~~~~g~~~~~~~~~~~~~~g~~vv~~~ 174 (371)
T 4f06_A 126 NTVPAAKVAKQ-------KGATKVAIAVS---DYGPGIDAETAFKKTFEAEGGKVVEAV 174 (371)
T ss_dssp HHHHHHHHHHH-------TTCCEEEEEEE---SSHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhhhhhhhhhh-------cCceEEEEEcC---CcccchhHHHHHHHHHHhcCCceEEEE
Confidence 34445666665 34678999873 456666677888999999999877543
No 137
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=25.03 E-value=25 Score=33.09 Aligned_cols=46 Identities=17% Similarity=0.054 Sum_probs=35.3
Q ss_pred CCCceEEEEEecCcch-hHHHHHHHHHHHHHHHCCCEEeecceeecC
Q 006697 175 LQQLKFGVFGLGNRQY-EHFNKIGIVLDEELCKQGGARLVPLGLGDD 220 (635)
Q Consensus 175 l~~~~~aVFGlGds~Y-~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~ 220 (635)
.+..+++|+-.||.-+ +.++..+..+.++|++.|++...-....||
T Consensus 28 ~~~~rvaIistGdEl~~G~~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd 74 (185)
T 3rfq_A 28 LVVGRALVVVVDDRTAHGDEDHSGPLVTELLTEAGFVVDGVVAVEAD 74 (185)
T ss_dssp -CCEEEEEEEECHHHHTTCCCSHHHHHHHHHHHTTEEEEEEEEECSC
T ss_pred CCCCEEEEEEECcccCCCCcCcHHHHHHHHHHHCCCEEEEEEEeCCC
Confidence 5678999999999876 227778889999999999986654444454
No 138
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=24.94 E-value=1.1e+02 Score=30.95 Aligned_cols=42 Identities=19% Similarity=0.270 Sum_probs=34.1
Q ss_pred CeeEEEEEeEEecCCCCCCceEEEEEEecCC--CCccCCCCeEEEeccC
Q 006697 294 PCRVNVAVRRELHKPDSDRSCIHLEFDVSGT--GITYETGDHVGVYVEN 340 (635)
Q Consensus 294 p~~a~V~~~~~L~~~~~~r~~~hie~di~~~--~l~Y~~GD~l~I~p~N 340 (635)
++.++|+..+.++. +++.++|..++. .+.|+||.|+.|..++
T Consensus 108 ~~~~~V~~~~~~~~-----~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~ 151 (338)
T 1krh_A 108 HFEGTLARVENLSD-----STITFDIQLDDGQPDIHFLAGQYVNVTLPG 151 (338)
T ss_dssp EEEEEEEEEEESSS-----SEEEEEEEECTTCCCCCCCTTCEEEEECTT
T ss_pred EEEEEEEEEEEcCC-----CEEEEEEEeCCCCCCCCcCCCCeEEEEcCC
Confidence 45688988888863 688999998763 6899999999998764
No 139
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=23.84 E-value=1.5e+02 Score=29.50 Aligned_cols=41 Identities=15% Similarity=0.223 Sum_probs=30.9
Q ss_pred CCeEEEEEECCCchHHH---HHHHHHHHHHhhhCCceEEEEeCCCC
Q 006697 83 KTKVTVFYGTQTGTAEG---FAKALAEEIKARYEKAAVKVVDLDDY 125 (635)
Q Consensus 83 ~~~v~I~YgSqtGtte~---~A~~l~~~l~~~~~g~~~~v~dl~~~ 125 (635)
+++|.|+||..+.--+- =|+.+.+.|.+. |+++.++|..+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~--g~~v~~i~~~~~ 56 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDA--GIDAHPFDPAER 56 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT--TCEEEEECTTTS
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHC--CCEEEEEeCCCc
Confidence 57899999977764433 467788888877 888888886554
No 140
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=23.64 E-value=38 Score=31.83 Aligned_cols=57 Identities=19% Similarity=0.325 Sum_probs=38.1
Q ss_pred CCCceEEEEEecCcch--hHHHHHHHHHHHHHHH---CCCEEeecceeecCCCCchHHHHHH
Q 006697 175 LQQLKFGVFGLGNRQY--EHFNKIGIVLDEELCK---QGGARLVPLGLGDDDQCIEDDFTAW 231 (635)
Q Consensus 175 l~~~~~aVFGlGds~Y--~~f~~~~k~ld~~L~~---lGa~~v~~~g~gD~~~~~e~~f~~W 231 (635)
.+..+++|+-.||.-+ .-++..+..+.++|++ +|++.+.-....|+.+.+.+.+..|
T Consensus 12 ~~~~rv~IistGdEl~~g~~~D~n~~~L~~~L~~~~~~G~~v~~~~iv~Dd~~~I~~al~~a 73 (189)
T 1jlj_A 12 DHQIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDW 73 (189)
T ss_dssp -CCCEEEEEEECHHHHTTSSCCHHHHHHHHHHHCTTTTCCEEEEEEEECSCHHHHHHHHHHH
T ss_pred cCCCEEEEEEECCccCCCcccchHHHHHHHHHhchhcCCcEEEEEEEeCCCHHHHHHHHHHH
Confidence 4568999999999865 3345667789999998 8998765444445533344444444
No 141
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=23.57 E-value=3e+02 Score=26.18 Aligned_cols=137 Identities=7% Similarity=-0.011 Sum_probs=74.4
Q ss_pred CCeEEEEEECCCc-hHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhc--cCCeEEEEEecCCCCCCChhHH
Q 006697 83 KTKVTVFYGTQTG-TAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLK--KETLAFFMVATYGDGEPTDNAA 159 (635)
Q Consensus 83 ~~~v~I~YgSqtG-tte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~--~~~~vif~~sTyg~G~~p~na~ 159 (635)
...|.|+..+.+. -...+.+.+.+.+.+. |..+.+++..+-......++..+. ..+.+|+..... .+
T Consensus 8 ~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-----~~--- 77 (291)
T 3egc_A 8 SNVVGLIVSDIENVFFAEVASGVESEARHK--GYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSEG-----EH--- 77 (291)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCSS-----CC---
T ss_pred CcEEEEEECCCcchHHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCCC-----Ch---
Confidence 4567777765543 3456777788888877 788888776542222222344443 345555543322 12
Q ss_pred HHHHHHhcCCCCCCCCCCceEEEEEecCc----ch--hHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHHHH
Q 006697 160 RFYKWFTEGNDRGPWLQQLKFGVFGLGNR----QY--EHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRE 233 (635)
Q Consensus 160 ~F~~~L~~~~~~~~~l~~~~~aVFGlGds----~Y--~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W~~ 233 (635)
..++.+.. .+..+.+++.... .| ...-.+++.+-+.|.++|.+++.=++ ++.. ......+.+
T Consensus 78 ~~~~~~~~--------~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~-~~~~---~~~~~~R~~ 145 (291)
T 3egc_A 78 DYLRTELP--------KTFPIVAVNRELRIPGCGAVLSENVRGARTAVEYLIARGHTRIGAIV-GSAG---LMTSRERLK 145 (291)
T ss_dssp HHHHHSSC--------TTSCEEEESSCCCCTTCEEEEECHHHHHHHHHHHHHHTTCCSEEEEC-SCTT---SHHHHHHHH
T ss_pred HHHHHhhc--------cCCCEEEEecccCCCCCCEEEECcHHHHHHHHHHHHHcCCCEEEEEe-CCCC---CcCHHHHHH
Confidence 24555543 2455555553221 11 23345667777888889998875332 2222 133455556
Q ss_pred HHHHHHHH
Q 006697 234 LVWPELDQ 241 (635)
Q Consensus 234 ~l~~~L~~ 241 (635)
.+.+++.+
T Consensus 146 gf~~~l~~ 153 (291)
T 3egc_A 146 GFRAAMSA 153 (291)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666665
No 142
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=23.51 E-value=4.8e+02 Score=24.79 Aligned_cols=138 Identities=8% Similarity=0.036 Sum_probs=71.8
Q ss_pred CCeEEEEEECCC-chHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCc-hHHHhhhc--cCCeEEEEEecCCCCCCChhH
Q 006697 83 KTKVTVFYGTQT-GTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDD-EQYEEKLK--KETLAFFMVATYGDGEPTDNA 158 (635)
Q Consensus 83 ~~~v~I~YgSqt-Gtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~-~~~~~~l~--~~~~vif~~sTyg~G~~p~na 158 (635)
.++|.++..+.+ .--..+.+.+.+.+++. |..+.++...+.+.+. ...+..+. ..+.+|+. ++. ++..
T Consensus 4 ~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~-~~~-----~~~~ 75 (305)
T 3g1w_A 4 NETYMMITFQSGMDYWKRCLKGFEDAAQAL--NVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAIS-AID-----PVEL 75 (305)
T ss_dssp -CEEEEEESSTTSTHHHHHHHHHHHHHHHH--TCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEEC-CSS-----TTTT
T ss_pred CceEEEEEccCCChHHHHHHHHHHHHHHHc--CCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEc-CCC-----HHHH
Confidence 455665554443 34566777888888877 7777764333333322 12333332 34555553 322 1222
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEEEecC-----cch--hHHHHHHHHHHHHHHHC--CCEEeecceeecCCCCchHHHH
Q 006697 159 ARFYKWFTEGNDRGPWLQQLKFGVFGLGN-----RQY--EHFNKIGIVLDEELCKQ--GGARLVPLGLGDDDQCIEDDFT 229 (635)
Q Consensus 159 ~~F~~~L~~~~~~~~~l~~~~~aVFGlGd-----s~Y--~~f~~~~k~ld~~L~~l--Ga~~v~~~g~gD~~~~~e~~f~ 229 (635)
...++.+.+. +..+.+++... -.| ...-.+++.+-++|.+. |.+++.=++ +... ....
T Consensus 76 ~~~~~~~~~~--------~iPvV~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~g~~~i~~i~-~~~~----~~~~ 142 (305)
T 3g1w_A 76 TDTINKAVDA--------GIPIVLFDSGAPDSHAHSFLGTNNYNAGMNAAYKMAELLDGEGEVAVIT-LPNQ----LNHQ 142 (305)
T ss_dssp HHHHHHHHHT--------TCCEEEESSCCTTSCCSCEEECCHHHHHHHHHHHHHHHTTTCEEEEEEE-CTTC----HHHH
T ss_pred HHHHHHHHHC--------CCcEEEECCCCCCCceeEEECcCHHHHHHHHHHHHHHHhCCCcEEEEEe-CCCc----ccHH
Confidence 3355666542 34455554311 111 23345667777888888 888886544 3321 3444
Q ss_pred HHHHHHHHHHHH
Q 006697 230 AWRELVWPELDQ 241 (635)
Q Consensus 230 ~W~~~l~~~L~~ 241 (635)
...+.+..++.+
T Consensus 143 ~R~~gf~~~l~~ 154 (305)
T 3g1w_A 143 ERTTGFKETLEA 154 (305)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 555666666664
No 143
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=23.45 E-value=3e+02 Score=26.11 Aligned_cols=137 Identities=11% Similarity=0.053 Sum_probs=71.8
Q ss_pred CCeEEEEEEC------CCchHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhc--cCCeEEEEEecCCCCCC
Q 006697 83 KTKVTVFYGT------QTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLK--KETLAFFMVATYGDGEP 154 (635)
Q Consensus 83 ~~~v~I~YgS------qtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~--~~~~vif~~sTyg~G~~ 154 (635)
...|.|+..+ ...-...+.+.+.+.+.+. |..+.+.+.++-......++..+. ..+.+|+..+..
T Consensus 8 ~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~----- 80 (292)
T 3k4h_A 8 TKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVE--GYALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSRE----- 80 (292)
T ss_dssp CCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHT--TCEEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBT-----
T ss_pred CCEEEEEecCCccccccCHHHHHHHHHHHHHHHHc--CCEEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCC-----
Confidence 4567777666 2334567777788888877 777766554422111122333343 345666543322
Q ss_pred ChhHHHHHHHHhcCCCCCCCCCCceEEEEEecC-----cch--hHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHH
Q 006697 155 TDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGN-----RQY--EHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDD 227 (635)
Q Consensus 155 p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGd-----s~Y--~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~ 227 (635)
++ ..++.+... +..+.+++... -.| ...-.+++..-+.|.+.|.+++.=++ ++... ..
T Consensus 81 ~~---~~~~~l~~~--------~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~-~~~~~---~~ 145 (292)
T 3k4h_A 81 ND---RIIQYLHEQ--------NFPFVLIGKPYDRKDEITYVDNDNYTAAREVAEYLISLGHKQIAFIG-GGSDL---LV 145 (292)
T ss_dssp TC---HHHHHHHHT--------TCCEEEESCCSSCTTTSCEEECCHHHHHHHHHHHHHHTTCCCEEEEE-SCTTB---HH
T ss_pred Ch---HHHHHHHHC--------CCCEEEECCCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCceEEEEe-Ccccc---hh
Confidence 12 245666542 34555555321 112 23345677777888889999876432 32221 22
Q ss_pred HHHHHHHHHHHHHH
Q 006697 228 FTAWRELVWPELDQ 241 (635)
Q Consensus 228 f~~W~~~l~~~L~~ 241 (635)
.....+.+.++|.+
T Consensus 146 ~~~R~~gf~~~l~~ 159 (292)
T 3k4h_A 146 TRDRLAGMSDALKL 159 (292)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33444555566654
No 144
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=23.07 E-value=1.8e+02 Score=27.36 Aligned_cols=42 Identities=10% Similarity=0.184 Sum_probs=32.8
Q ss_pred CCeeEEEEEeEEecCCCCCCceEEEEEEecCC--CCccCCCCeEEEecc
Q 006697 293 HPCRVNVAVRRELHKPDSDRSCIHLEFDVSGT--GITYETGDHVGVYVE 339 (635)
Q Consensus 293 ~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~--~l~Y~~GD~l~I~p~ 339 (635)
....++|+.++.++. ++..++|.+++. ...|+||.|+.|..+
T Consensus 10 ~~~~~~v~~~~~~t~-----~~~~~~l~~~~~~~~~~~~pGq~v~l~~~ 53 (243)
T 2eix_A 10 EYKKFMLREKQIINH-----NTRLFRFNLHHPEDVVGLPIGQHMSVKAT 53 (243)
T ss_dssp SCEEEEEEEEEEEET-----TEEEEEEECSSTTCCCCCCTTCEEEEEEE
T ss_pred ceEEEEEEEEEEeCC-----CeEEEEEEcCCCCcccCcCCceEEEEEEe
Confidence 345689999998874 577888887752 578999999999865
No 145
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=22.95 E-value=1.5e+02 Score=29.68 Aligned_cols=42 Identities=19% Similarity=0.339 Sum_probs=33.3
Q ss_pred CeeEEEEEeEEecCCCCCCceEEEEEEecCC-CC-ccCCCCeEEEeccC
Q 006697 294 PCRVNVAVRRELHKPDSDRSCIHLEFDVSGT-GI-TYETGDHVGVYVEN 340 (635)
Q Consensus 294 p~~a~V~~~~~L~~~~~~r~~~hie~di~~~-~l-~Y~~GD~l~I~p~N 340 (635)
.+.++|+..+.++. +++.++|..++. .+ .|+||.||.|..++
T Consensus 8 ~~~~~V~~~~~~t~-----~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~ 51 (321)
T 2pia_A 8 FLRLKIASKEKIAR-----DIWSFELTDPQGAPLPPFEAGANLTVAVPN 51 (321)
T ss_dssp CEEEEEEEEEEEET-----TEEEEEEECTTCCCCCCCCTTCEEEEECTT
T ss_pred cEEEEEEEEEEcCC-----CEEEEEEEcCCCCcCCCCCCCCEEEEECCC
Confidence 45688999998873 688999987753 23 89999999998764
No 146
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=22.21 E-value=1.2e+02 Score=29.42 Aligned_cols=43 Identities=12% Similarity=0.181 Sum_probs=33.5
Q ss_pred CCCeeEEEEEeEEecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccC
Q 006697 292 HHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVEN 340 (635)
Q Consensus 292 ~~p~~a~V~~~~~L~~~~~~r~~~hie~di~~~~l~Y~~GD~l~I~p~N 340 (635)
..++.++|+..+.++. +++.++|..++ .+.|+||.|+.|..+.
T Consensus 14 ~~~~~~~V~~~~~~~~-----~~~~l~l~~~~-~~~~~pGQ~v~l~~~~ 56 (272)
T 2bgi_A 14 VLPDAQTVTSVRHWTD-----TLFSFRVTRPQ-TLRFRSGEFVMIGLLD 56 (272)
T ss_dssp --CEEEEEEEEEEEET-----TEEEEEEECCT-TCCCCTTCEEEEEEEC
T ss_pred EEeEEEEEEEEEEcCC-----CEEEEEEeCCC-CCccCCCCEEEEEecc
Confidence 3456799999999874 57888888764 5789999999998763
No 147
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=21.20 E-value=2.5e+02 Score=27.73 Aligned_cols=97 Identities=18% Similarity=0.245 Sum_probs=0.0
Q ss_pred CCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCceE---EEEeCCCCCcCchHHHhhhccCCeEEEEEecCCCCCCChhH
Q 006697 82 GKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAV---KVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNA 158 (635)
Q Consensus 82 ~~~~v~I~YgSqtGtte~~A~~l~~~l~~~~~g~~~---~v~dl~~~~~~~~~~~~~l~~~~~vif~~sTyg~G~~p~na 158 (635)
+.++|.|+| +.+...+..++.+.+.+++. |.++ ..++..+.+... .+.++...+.=++++...+. .+
T Consensus 138 g~~~ia~i~-~~~~~g~~~~~~~~~~l~~~--g~~v~~~~~~~~~~~d~~~--~~~~l~~~~~d~v~~~~~~~-----~a 207 (368)
T 4eyg_A 138 GIKKVATLT-SDYAPGNDALAFFKERFTAG--GGEIVEEIKVPLANPDFAP--FLQRMKDAKPDAMFVFVPAG-----QG 207 (368)
T ss_dssp TCCEEEEEE-ESSHHHHHHHHHHHHHHHHT--TCEEEEEEEECSSSCCCHH--HHHHHHHHCCSEEEEECCTT-----CH
T ss_pred CCCEEEEEe-cCchHhHHHHHHHHHHHHHc--CCEEEEEEeCCCCCCcHHH--HHHHHHhcCCCEEEEeccch-----HH
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEEEecCcchhHH
Q 006697 159 ARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHF 193 (635)
Q Consensus 159 ~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f 193 (635)
..|++.+++.. +.+..+.++|.++.....+
T Consensus 208 ~~~~~~~~~~g-----~~~~~v~~~~~~~~~~~~~ 237 (368)
T 4eyg_A 208 GNFMKQFAERG-----LDKSGIKVIGPGDVMDDDL 237 (368)
T ss_dssp HHHHHHHHHTT-----GGGTTCEEEEETTTTCHHH
T ss_pred HHHHHHHHHcC-----CCcCCceEEecCcccCHHH
No 148
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=20.93 E-value=3.6e+02 Score=25.50 Aligned_cols=112 Identities=13% Similarity=0.010 Sum_probs=56.7
Q ss_pred CCeEEEEEECCCc-hHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhc--cCCeEEEEEecCCCCCCChhHH
Q 006697 83 KTKVTVFYGTQTG-TAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLK--KETLAFFMVATYGDGEPTDNAA 159 (635)
Q Consensus 83 ~~~v~I~YgSqtG-tte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~--~~~~vif~~sTyg~G~~p~na~ 159 (635)
...|.|+..+.+. --..+.+.+.+.+.+. |..+.+.+.+.-.......+..+. ..+.+|+. ++. ++...
T Consensus 8 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~-~~~-----~~~~~ 79 (293)
T 3l6u_A 8 RNIVGFTIVNDKHEFAQRLINAFKAEAKAN--KYEALVATSQNSRISEREQILEFVHLKVDAIFIT-TLD-----DVYIG 79 (293)
T ss_dssp -CEEEEEESCSCSHHHHHHHHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEE-CSC-----TTTTH
T ss_pred CcEEEEEEecCCcHHHHHHHHHHHHHHHHc--CCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEe-cCC-----hHHHH
Confidence 4567777766544 3456677777888777 788887766432111112333343 34556554 322 12222
Q ss_pred HHHHHHhcCCCCCCCCCCceEEEEEecCc-----ch--hHHHHHHHHHHHHHHH-C-CCE
Q 006697 160 RFYKWFTEGNDRGPWLQQLKFGVFGLGNR-----QY--EHFNKIGIVLDEELCK-Q-GGA 210 (635)
Q Consensus 160 ~F~~~L~~~~~~~~~l~~~~~aVFGlGds-----~Y--~~f~~~~k~ld~~L~~-l-Ga~ 210 (635)
..++.+.+. +.++.+++.... .| ...-.+++.+-+.|.+ + |.+
T Consensus 80 ~~~~~~~~~--------~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~~ 131 (293)
T 3l6u_A 80 SAIEEAKKA--------GIPVFAIDRMIRSDAVVSSITSNNQMIGEQLASYIKNELIKQT 131 (293)
T ss_dssp HHHHHHHHT--------TCCEEEESSCCCCTTCSEEEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHc--------CCCEEEecCCCCCCcceeEEecCHHHHHHHHHHHHHHHhccCC
Confidence 355666542 344555543211 11 2233455566666666 5 766
No 149
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=20.80 E-value=25 Score=32.14 Aligned_cols=54 Identities=13% Similarity=0.256 Sum_probs=35.2
Q ss_pred ceEEEEEecCcch--hHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHH
Q 006697 178 LKFGVFGLGNRQY--EHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAW 231 (635)
Q Consensus 178 ~~~aVFGlGds~Y--~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W 231 (635)
++++|+-.||.-+ .-++..+..+.++|+++|++...-....|+.+.+.+.+..|
T Consensus 2 ~~v~Ii~tGdEl~~G~i~D~n~~~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~ 57 (164)
T 2is8_A 2 FRVGILTVSDKGFRGERQDTTHLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLW 57 (164)
T ss_dssp EEEEEEEECHHHHHTSSCCCHHHHHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHH
T ss_pred cEEEEEEEcCcccCCCcccchHHHHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHH
Confidence 4789999998854 33455677889999999997665444445432334444444
No 150
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=20.66 E-value=1.1e+02 Score=30.37 Aligned_cols=40 Identities=13% Similarity=0.037 Sum_probs=33.0
Q ss_pred CCeEEEEEEC---------------CCchHHHHHHHHHHHHHhhhCCceEEEEeCCC
Q 006697 83 KTKVTVFYGT---------------QTGTAEGFAKALAEEIKARYEKAAVKVVDLDD 124 (635)
Q Consensus 83 ~~~v~I~YgS---------------qtGtte~~A~~l~~~l~~~~~g~~~~v~dl~~ 124 (635)
+|+|+++-.+ ..|.++.++..+++.|.++ |+++.++....
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~--G~~v~v~~~~~ 57 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLEL--GHEVFLLGAPG 57 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHT--TCEEEEESCTT
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHc--CCeEEEEecCC
Confidence 5788887666 4699999999999999988 89999886654
No 151
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=20.58 E-value=5.9e+02 Score=24.74 Aligned_cols=139 Identities=12% Similarity=0.019 Sum_probs=73.6
Q ss_pred CCeEEEEEEC--CCc-hHHHHHHHHHHHHHhhhCCceEEEEeCCCCCcCchHHHhhhc--cCCeEEEEEecCCCCCCChh
Q 006697 83 KTKVTVFYGT--QTG-TAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLK--KETLAFFMVATYGDGEPTDN 157 (635)
Q Consensus 83 ~~~v~I~YgS--qtG-tte~~A~~l~~~l~~~~~g~~~~v~dl~~~~~~~~~~~~~l~--~~~~vif~~sTyg~G~~p~n 157 (635)
...|.++..+ .+. --..+.+.+.+.+.+. |..+.+.+.+.-......++..+. ..+.+|+. ++.. +
T Consensus 61 ~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~-~~~~------~ 131 (338)
T 3dbi_A 61 TQTLGLVVTNTLYHGIYFSELLFHAARMAEEK--GRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIY-PRFL------S 131 (338)
T ss_dssp CSEEEEEECTTTTSTTHHHHHHHHHHHHHHHT--TCEEEEEECTTSHHHHHHHHHHHHHTTCSEEEEC-CSSS------C
T ss_pred CCEEEEEecCCcccChhHHHHHHHHHHHHHHC--CCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEe-CCCC------C
Confidence 4567777776 333 3466777788888877 788877774322111122333343 34555553 3221 1
Q ss_pred HHHHHHHHhcCCCCCCCCCCceEEEEEecCc----ch--hHHHHHHHHHHHHHHHCCCEEeecceeecCCCCchHHHHHH
Q 006697 158 AARFYKWFTEGNDRGPWLQQLKFGVFGLGNR----QY--EHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAW 231 (635)
Q Consensus 158 a~~F~~~L~~~~~~~~~l~~~~~aVFGlGds----~Y--~~f~~~~k~ld~~L~~lGa~~v~~~g~gD~~~~~e~~f~~W 231 (635)
...+.+.+... +..+.+++-... .| ...-.+++..-++|.++|-+++.=++ ++.. ......+
T Consensus 132 ~~~~~~~~~~~--------~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~-~~~~---~~~~~~R 199 (338)
T 3dbi_A 132 VDEIDDIIDAH--------SQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQEIAFLT-GSMD---SPTSIER 199 (338)
T ss_dssp HHHHHHHHHHC--------SSCEEEESSCCSSSGGGEECBCHHHHHHHHHHHHHHTTCCSEEEEC-CCTT---CHHHHHH
T ss_pred hHHHHHHHHcC--------CCCEEEEcCCCCCCCCCEEEEChHHHHHHHHHHHHHCCCCEEEEEe-CCCC---CccHHHH
Confidence 22344555442 344555553211 11 22334667777888899998876432 2222 1334455
Q ss_pred HHHHHHHHHHh
Q 006697 232 RELVWPELDQL 242 (635)
Q Consensus 232 ~~~l~~~L~~~ 242 (635)
.+.+..+|.+.
T Consensus 200 ~~Gf~~al~~~ 210 (338)
T 3dbi_A 200 LAGYKDALAQH 210 (338)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHC
Confidence 66666677653
No 152
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=20.26 E-value=1.6e+02 Score=24.17 Aligned_cols=59 Identities=24% Similarity=0.343 Sum_probs=38.8
Q ss_pred cCCCCeEEEecc---CCHHHHHHHHHHhCCCCccEEEEeeCCCCCCCCCCCCCCCCCCcccHHHHHhhh
Q 006697 328 YETGDHVGVYVE---NCDETVEEAGKLLGQSLELLFSLHTDNEDGTPRGSSLTPPFPGPCTLRTALARY 393 (635)
Q Consensus 328 Y~~GD~l~I~p~---N~~~~V~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~pfp~p~tl~~~l~~~ 393 (635)
|+ ||.+.+.-+ +-.+..+++-.++++..++.|+++..+++|.+ ..+.+-.-|.+||+-|
T Consensus 13 ~~-gdi~~~~v~~~i~~~~L~~kv~~~~~~~~~~~f~lky~DEeGD~------itisSd~EL~eAl~l~ 74 (89)
T 1vd2_A 13 YR-GDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDP------CTVSSQLELEEAFRLY 74 (89)
T ss_dssp SS-SCEEEEEECTTCCHHHHHHHHHHHTTCCSSCCEEEEECCSSSCC------EECCSHHHHHHHHHHH
T ss_pred eC-CeEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEEEECCCCCc------ccccCHHHHHHHHHHH
Confidence 44 666665543 34577888888999998999999999887642 2333333445555543
No 153
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=20.24 E-value=81 Score=32.28 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=25.5
Q ss_pred CcEEEEecCCC--chhHHHHHHHHHHHHhcCCCCCcEEEEEeec
Q 006697 544 VPIIMVGPGTG--LAPFRGFLQERMALKQDGAQLGPALLFFGCR 585 (635)
Q Consensus 544 ~piImIg~GTG--IAPfrs~lq~r~~~~~~g~~~~~~~LffG~R 585 (635)
+.||+.|+||| |-|..++.++..+ +| .-.+|.|..
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~---~g----~~V~~vg~~ 39 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQA---RG----YAVHWLGTP 39 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH---TT----CEEEEEECS
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHh---CC----CEEEEEECC
Confidence 47888999997 8999999998764 22 334566644
Done!