Your job contains 1 sequence.
>006700
MPASKLSSCLAVAAAVASLSTASNRAFADAPSRFSFFSSSPQPTSSGNDEAEQTADAQKS
REPEEPRGSGFDPEALERAAKALREFNSSRHAREAFDIMRKQEQTRLAELDVEKVHYEAI
QSQVDVERQRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQ
EESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEAKLTEDHNR
RMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGATALAAGIYTTREGA
RVTWGYVNRILGQPSLIRESSIGKFPWSGLLSQAMNKVIRNKTSAGTAGPVEAIKNNGDI
ILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTG
GDVAPLGAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLF
RTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPREEERFKLLKLYLKKYLCSDEG
DSSSLKWGHLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYARPDC
VLDSQLFREVVEYKVEEHHQRIKLAAEGSQPTKNQ
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006700
(635 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062170 - symbol:AT2G18330 species:3702 "Arabi... 2191 4.9e-227 1
TAIR|locus:2097690 - symbol:AT3G03060 species:3702 "Arabi... 1860 5.9e-192 1
TAIR|locus:2148206 - symbol:AT5G16930 species:3702 "Arabi... 1821 7.9e-188 1
UNIPROTKB|A7YWC4 - symbol:ATAD3 "ATPase family AAA domain... 766 5.0e-76 1
UNIPROTKB|F1RJE4 - symbol:LOC100525876 "Uncharacterized p... 762 1.3e-75 1
ZFIN|ZDB-GENE-040426-1826 - symbol:atad3b "ATPase family,... 756 5.7e-75 1
WB|WBGene00010015 - symbol:atad-3 species:6239 "Caenorhab... 756 5.7e-75 1
UNIPROTKB|E1BRY8 - symbol:ATAD3A "Uncharacterized protein... 755 7.3e-75 1
UNIPROTKB|H0Y2W2 - symbol:ATAD3A "ATPase family AAA domai... 753 1.2e-74 1
MGI|MGI:1919214 - symbol:Atad3a "ATPase family, AAA domai... 747 5.1e-74 1
UNIPROTKB|E2QZ61 - symbol:ATAD3A "Uncharacterized protein... 745 8.4e-74 1
UNIPROTKB|Q5T9A4 - symbol:ATAD3B "ATPase family AAA domai... 742 1.7e-73 1
RGD|1305964 - symbol:Atad3a "ATPase family, AAA domain co... 739 3.6e-73 1
UNIPROTKB|Q3KRE0 - symbol:Atad3 "ATPase family AAA domain... 739 3.6e-73 1
UNIPROTKB|Q9NVI7 - symbol:ATAD3A "ATPase family AAA domai... 738 4.6e-73 1
FB|FBgn0040237 - symbol:bor "belphegor" species:7227 "Dro... 711 3.3e-70 1
UNIPROTKB|Q5T2N8 - symbol:ATAD3C "ATPase family AAA domai... 620 1.5e-60 1
UNIPROTKB|Q5SV16 - symbol:ATAD3A "ATPase family AAA domai... 254 1.8e-31 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 204 7.4e-16 3
GENEDB_PFALCIPARUM|PF13_0063 - symbol:PF13_0063 "26S prot... 219 4.7e-15 1
UNIPROTKB|Q8IEK3 - symbol:PF13_0063 "26S proteasome regul... 219 4.7e-15 1
POMBASE|SPAC2G11.06 - symbol:vps4 "AAA family ATPase Vps4... 193 7.5e-15 4
FB|FBgn0028686 - symbol:Rpt3 "Regulatory particle triple-... 196 1.5e-14 2
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 190 2.5e-14 2
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 215 2.8e-14 3
ZFIN|ZDB-GENE-030616-593 - symbol:atad1a "ATPase family, ... 185 5.5e-14 2
CGD|CAL0002261 - symbol:RPT5 species:5476 "Candida albica... 214 6.7e-14 2
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 210 9.8e-14 3
ASPGD|ASPL0000002098 - symbol:AN6263 species:162425 "Emer... 220 1.0e-13 3
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 177 1.0e-13 2
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 177 1.0e-13 2
TAIR|locus:2036099 - symbol:RPT5B "26S proteasome AAA-ATP... 196 1.2e-13 3
WB|WBGene00004503 - symbol:rpt-3 species:6239 "Caenorhabd... 204 1.4e-13 2
DICTYBASE|DDB_G0284415 - symbol:psmC3 "26S proteasome ATP... 199 1.7e-13 3
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 205 1.7e-13 3
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 202 2.0e-13 2
SGD|S000005995 - symbol:YTA6 "Putative ATPase of the CDC4... 166 2.4e-13 2
RGD|1308494 - symbol:Spast "spastin" species:10116 "Rattu... 203 2.5e-13 2
UNIPROTKB|F1M9D2 - symbol:Spast "Spastin" species:10116 "... 203 2.5e-13 2
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 208 2.7e-13 2
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 208 2.7e-13 2
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 197 2.7e-13 3
TAIR|locus:2137261 - symbol:AT4G04180 species:3702 "Arabi... 208 2.8e-13 2
UNIPROTKB|A2VDN5 - symbol:SPAST "Spastin" species:9913 "B... 205 3.0e-13 2
UNIPROTKB|D4A0I3 - symbol:Spast "Spastin" species:10116 "... 203 3.1e-13 2
MGI|MGI:1858896 - symbol:Spast "spastin" species:10090 "M... 203 3.1e-13 2
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 207 3.2e-13 1
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 207 3.2e-13 1
UNIPROTKB|F1PR99 - symbol:SPAST "Uncharacterized protein"... 203 3.3e-13 2
UNIPROTKB|Q9UBP0 - symbol:SPAST "Spastin" species:9606 "H... 202 4.1e-13 2
UNIPROTKB|Q05AS3 - symbol:spast "Spastin" species:8364 "X... 197 4.2e-13 3
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 197 4.3e-13 3
UNIPROTKB|J9NWA6 - symbol:LOC100687152 "Uncharacterized p... 191 5.1e-13 2
UNIPROTKB|F1PBK7 - symbol:PSMC3 "Uncharacterized protein"... 191 5.3e-13 2
UNIPROTKB|P17980 - symbol:PSMC3 "26S protease regulatory ... 191 5.3e-13 2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 198 5.4e-13 2
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 198 5.4e-13 2
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 186 6.4e-13 2
RGD|61905 - symbol:Psmc3 "proteasome (prosome, macropain)... 191 6.8e-13 2
MGI|MGI:1098754 - symbol:Psmc3 "proteasome (prosome, macr... 191 7.0e-13 2
UNIPROTKB|Q6P6U2 - symbol:Psmc3 "26S protease regulatory ... 191 7.0e-13 2
UNIPROTKB|Q5ZK92 - symbol:SPAST "Spastin" species:9031 "G... 196 7.1e-13 2
UNIPROTKB|F1SID4 - symbol:PSMC3 "Uncharacterized protein"... 191 7.3e-13 2
ZFIN|ZDB-GENE-030131-666 - symbol:psmc3 "proteasome (pros... 191 7.5e-13 2
UNIPROTKB|E1C6S3 - symbol:SPAST "Spastin" species:9031 "G... 196 8.0e-13 2
UNIPROTKB|Q6AZT2 - symbol:spast "Spastin" species:8355 "X... 197 8.2e-13 2
UNIPROTKB|F1NCJ3 - symbol:SPAST "Spastin" species:9031 "G... 196 8.4e-13 2
UNIPROTKB|E2RA71 - symbol:VPS4A "Uncharacterized protein"... 179 8.6e-13 2
UNIPROTKB|Q9UN37 - symbol:VPS4A "Vacuolar protein sorting... 179 8.6e-13 2
MGI|MGI:1890520 - symbol:Vps4a "vacuolar protein sorting ... 179 8.6e-13 2
RGD|628810 - symbol:Vps4a "vacuolar protein sorting 4 hom... 179 8.6e-13 2
UNIPROTKB|Q793F9 - symbol:Vps4a "Vacuolar protein sorting... 179 8.6e-13 2
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 201 1.0e-12 2
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 201 1.0e-12 2
SGD|S000001628 - symbol:RPT1 "ATPase of the 19S regulator... 193 1.1e-12 2
UNIPROTKB|O42587 - symbol:psmc3-a "26S protease regulator... 191 1.2e-12 2
TAIR|locus:2161258 - symbol:RPT3 "regulatory particle tri... 197 1.3e-12 1
GENEDB_PFALCIPARUM|PF11_0314 - symbol:PF11_0314 "26S prot... 199 1.5e-12 2
UNIPROTKB|Q8II60 - symbol:PF11_0314 "26S protease subunit... 199 1.5e-12 2
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 204 1.5e-12 2
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 204 1.5e-12 2
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 204 1.5e-12 2
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 204 1.5e-12 2
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 204 1.5e-12 2
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 204 1.5e-12 2
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 204 1.5e-12 2
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 204 1.5e-12 2
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 197 1.5e-12 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 204 1.6e-12 2
UNIPROTKB|G3X8E2 - symbol:VPS4A "Uncharacterized protein"... 179 1.8e-12 2
ZFIN|ZDB-GENE-030131-5083 - symbol:psmc4 "proteasome (pro... 194 2.1e-12 2
GENEDB_PFALCIPARUM|PFD0665c - symbol:PFD0665c "26s protea... 197 2.1e-12 2
UNIPROTKB|Q8I1V1 - symbol:PFD0665c "26S proteasome AAA-AT... 197 2.1e-12 2
UNIPROTKB|G4ML45 - symbol:MGG_06686 "Uncharacterized prot... 174 2.1e-12 3
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 186 2.1e-12 2
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 184 2.1e-12 2
UNIPROTKB|I3LL27 - symbol:VPS4A "Uncharacterized protein"... 179 2.2e-12 2
TAIR|locus:2038678 - symbol:SKD1 "SUPPRESSOR OF K+ TRANSP... 187 2.3e-12 2
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 193 2.6e-12 1
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 194 2.6e-12 1
WARNING: Descriptions of 680 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2062170 [details] [associations]
symbol:AT2G18330 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000741
"karyogamy" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0034968 "histone lysine
methylation" evidence=RCA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
HSSP:Q01853 GO:GO:0017111 EMBL:AC006439 eggNOG:COG1223
HOGENOM:HOG000231291 OMA:MMDTRVQ InterPro:IPR021911 Pfam:PF12037
ProtClustDB:CLSN2685560 EMBL:AY054494 EMBL:AY093265 IPI:IPI00524126
PIR:A84563 RefSeq:NP_565435.1 UniGene:At.13881
ProteinModelPortal:Q9ZPW5 SMR:Q9ZPW5 STRING:Q9ZPW5 PaxDb:Q9ZPW5
PRIDE:Q9ZPW5 EnsemblPlants:AT2G18330.1 GeneID:816348
KEGG:ath:AT2G18330 TAIR:At2g18330 InParanoid:Q9ZPW5
PhylomeDB:Q9ZPW5 ArrayExpress:Q9ZPW5 Genevestigator:Q9ZPW5
Uniprot:Q9ZPW5
Length = 636
Score = 2191 (776.3 bits), Expect = 4.9e-227, P = 4.9e-227
Identities = 440/613 (71%), Positives = 504/613 (82%)
Query: 24 NRAFADAXXXXXXXXXXXXXXXXGND-EAEQTADAQKSREPEEPRGSGFDPXXXXXXXXX 82
NRA+AD+ D ++ + ++ + +EP+GSGFDP
Sbjct: 24 NRAYADSRFRFPFFSSSPPAEESPTDHKSSSNSKSETKPDSDEPKGSGFDPESLERGAKA 83
Query: 83 XXXFNSSRHAREAFDIMRKQEQTRLAELDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQ 142
NSS H+++ FD+MRKQE+TRLAEL EK H EAIQ+ D+ERQRKLAE+ RNLVQQ
Sbjct: 84 LREINSSPHSKQVFDLMRKQEKTRLAELAAEKEHNEAIQASKDIERQRKLAEDQRNLVQQ 143
Query: 143 KAQARAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQ 202
+AQA+AQ LR EDELARKR+QTD+EAQRRHN ELV MQE SSIRKE+AR +TEEQIQAQQ
Sbjct: 144 QAQAKAQNLRYEDELARKRMQTDNEAQRRHNAELVSMQEASSIRKEKARIATEEQIQAQQ 203
Query: 203 RLTEKERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTF 262
R TEKERAE+ERETIRVKAMAEAEGRAHEAKLTE+ NRRML+++INGEREKWLAAINTTF
Sbjct: 204 RETEKERAELERETIRVKAMAEAEGRAHEAKLTEEQNRRMLLDKINGEREKWLAAINTTF 263
Query: 263 SHIEEGVRSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSI 322
SHIE GVR+LLTDR+KL+MTVGG TALAAG+YTTREGARVTWGY+NRILGQPSLIRESS+
Sbjct: 264 SHIEGGVRTLLTDRSKLIMTVGGVTALAAGVYTTREGARVTWGYINRILGQPSLIRESSM 323
Query: 323 GKFPWSGLLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKI 382
G+FPW+G +SQ NK+ T+AG A E K ++ILH SL+ RI+ LA+ATANTK
Sbjct: 324 GRFPWAGSVSQFKNKL---STAAGAAASAEGEKPLENVILHRSLKTRIERLARATANTKS 380
Query: 383 HQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAK 442
H+APFRNM+FYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAK
Sbjct: 381 HKAPFRNMMFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAK 440
Query: 443 KSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLD 502
KS KGLLLFIDEADAFLCERNS +MSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLD
Sbjct: 441 KSNKGLLLFIDEADAFLCERNSTYMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLD 500
Query: 503 SAITDRIDEVIEFPLPREEERFXXXXXXXXXXXCSDE--GDS-SSLKWGHLFKKQQ-QKI 558
SA+TDRIDEVIEFPLP EEERF D+ G+ S+LKW +LFKK++ QKI
Sbjct: 501 SAVTDRIDEVIEFPLPGEEERFKLLKLYLNKYLMGDDKKGEKDSNLKWSNLFKKKKSQKI 560
Query: 559 TIK-DLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEE 617
TI+ DL+D VI+EAA+KTEGFSGREIAKL+A VQAAVY R DCVLDSQLF E+V+YK+EE
Sbjct: 561 TIEGDLTDQVIKEAAKKTEGFSGREIAKLVAGVQAAVYGRQDCVLDSQLFEEIVDYKIEE 620
Query: 618 HHQRIKLAAEGSQ 630
HHQRI+LA EG Q
Sbjct: 621 HHQRIRLATEGGQ 633
>TAIR|locus:2097690 [details] [associations]
symbol:AT3G03060 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005618
"cell wall" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0008270 GO:GO:0009505
GO:GO:0017111 eggNOG:COG1223 InterPro:IPR021911 Pfam:PF12037
OMA:QKMAWLS EMBL:AK226793 IPI:IPI00536262 RefSeq:NP_186956.2
UniGene:At.53165 ProteinModelPortal:Q0WVF7 SMR:Q0WVF7 STRING:Q0WVF7
PaxDb:Q0WVF7 PRIDE:Q0WVF7 EnsemblPlants:AT3G03060.1 GeneID:821146
KEGG:ath:AT3G03060 TAIR:At3g03060 InParanoid:Q0WVF7
PhylomeDB:Q0WVF7 ProtClustDB:CLSN2685560 Genevestigator:Q0WVF7
Uniprot:Q0WVF7
Length = 628
Score = 1860 (659.8 bits), Expect = 5.9e-192, P = 5.9e-192
Identities = 370/581 (63%), Positives = 454/581 (78%)
Query: 52 EQTADAQKSREPEEPRGS--GFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQTRLAE 109
E+++ ++R + PR S GFDP N S +A++ F+ +++QE+T+ E
Sbjct: 56 EESSAPPRARN-DNPRTSSGGFDPEALERGAKALKEINHSSYAKKVFESIKQQEETKQTE 114
Query: 110 LDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTDHEAQ 169
+ ++A+Q+Q + ER + + +E + L Q +AQ ++Q R ED+LARKR+Q ++E
Sbjct: 115 FATKAQEFKAMQAQAETERHKVIYDEQKKLAQHQAQTKSQMARYEDDLARKRMQAENEFH 174
Query: 170 RRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRA 229
R N ELVKMQE+S+IR+EQARR+TEEQIQAQ+R TE+E+AEIERETIRVKA+AEAEGRA
Sbjct: 175 RTRNQELVKMQEDSAIRQEQARRATEEQIQAQRRQTEREKAEIERETIRVKAIAEAEGRA 234
Query: 230 HEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGATAL 289
HEA+L ED NRRML++R N EREKW+AAINTTF HI G+R++LTD+NKL++ VGG TAL
Sbjct: 235 HEARLAEDVNRRMLVDRANAEREKWVAAINTTFDHIGGGLRAILTDQNKLIVAVGGVTAL 294
Query: 290 AAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPWSGLLSQAMNKVIRNKTSAGTAG 349
AAGIYTTREGA+V W YV+RILGQPSLIRESS GK+PWSG LS+ M+ +R K SA G
Sbjct: 295 AAGIYTTREGAKVIWSYVDRILGQPSLIRESSRGKYPWSGSLSRVMS-TLRGKESASKNG 353
Query: 350 PVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIAR 409
K GD+ILHP L +RI+HLA +TANTK+HQAPFRN+L +GPPGTGKTM ARE+AR
Sbjct: 354 -----KRFGDVILHPPLAKRIEHLATSTANTKLHQAPFRNILLHGPPGTGKTMAARELAR 408
Query: 410 KSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMSE 469
KSGLDYA+MTGGDVAPLGAQAVTKIHE+FDW KKSK+GLLLFIDEADAFLCERN +MSE
Sbjct: 409 KSGLDYALMTGGDVAPLGAQAVTKIHELFDWGKKSKRGLLLFIDEADAFLCERNKTYMSE 468
Query: 470 AQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPREEERFXXXXX 529
AQRSALNALLFRTGDQS+DIVL LATNRPGDLDSA+ DR+DEV+EFPLP EEERF
Sbjct: 469 AQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRVDEVLEFPLPGEEERFKLLNL 528
Query: 530 XXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMAS 589
++ G S + LFKK+QQKI IK +++ +++EAA KTEGFSGREIAKLMAS
Sbjct: 529 YLEKYI-AEAGPSKPGLFDRLFKKEQQKIEIKGVTEELLKEAAAKTEGFSGREIAKLMAS 587
Query: 590 VQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIKLAAEGSQ 630
VQAAVY DCVLDS LFREVV+YKV EH QR KLA S+
Sbjct: 588 VQAAVYGSEDCVLDSMLFREVVDYKVAEHQQRRKLAGVDSK 628
>TAIR|locus:2148206 [details] [associations]
symbol:AT5G16930 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 GO:GO:0017111
eggNOG:COG1223 HOGENOM:HOG000231291 InterPro:IPR021911 Pfam:PF12037
OMA:QRYDEQM ProtClustDB:CLSN2685560 EMBL:AY080881 EMBL:AY133778
IPI:IPI00526600 RefSeq:NP_197195.2 UniGene:At.31619
UniGene:At.49031 ProteinModelPortal:Q8RXI0 SMR:Q8RXI0 PaxDb:Q8RXI0
PRIDE:Q8RXI0 EnsemblPlants:AT5G16930.1 GeneID:831556
KEGG:ath:AT5G16930 TAIR:At5g16930 InParanoid:Q8RXI0
PhylomeDB:Q8RXI0 ArrayExpress:Q8RXI0 Genevestigator:Q8RXI0
Uniprot:Q8RXI0
Length = 644
Score = 1821 (646.1 bits), Expect = 7.9e-188, P = 7.9e-188
Identities = 363/577 (62%), Positives = 446/577 (77%)
Query: 51 AEQTADAQKSREPEEPR--GSGFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQTRLA 108
A + +DA PR +GFDP N+S HA++ F+ ++ +E+TR A
Sbjct: 64 AGEESDAPPRIRNNNPRTTSAGFDPEALERGAKALKGINNSAHAKKVFESIKTREETRQA 123
Query: 109 ELDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTDHEA 168
E + ++A+QSQ + ERQR + EE + L Q +AQ ++Q R EDELARKR+Q ++EA
Sbjct: 124 EFTAKAQEFKAMQSQAEAERQRVIYEEQKKLAQHQAQTKSQMARYEDELARKRMQAENEA 183
Query: 169 QRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGR 228
QR N ELVKMQEES+IR+E ARR+TEE+IQAQ+R TE+E+AEIERETIRVKAMAEAEGR
Sbjct: 184 QRTRNQELVKMQEESAIRREVARRATEEEIQAQRRQTEREKAEIERETIRVKAMAEAEGR 243
Query: 229 AHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGATA 288
A E+KL+ED NRRML++R N EREKW++AINTTF HI G+R++LTD+NKL++ VGG TA
Sbjct: 244 ARESKLSEDVNRRMLVDRANAEREKWVSAINTTFDHIGGGLRTILTDQNKLIVAVGGLTA 303
Query: 289 LAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPWSGLLSQAMNKVIRNKTSAGTA 348
LAAGIYTTREGA+V W YV+RILGQPSLIRESS GK+PWSG S+ ++ +R T+
Sbjct: 304 LAAGIYTTREGAKVIWSYVDRILGQPSLIRESSRGKYPWSGSASRVLS-TLRGGGKESTS 362
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
+ K GD+IL P+L++RI+ LA ATANTK HQAPFRN+LFYGPPGTGKTM ARE+A
Sbjct: 363 ---KTGKGFGDVILRPALEKRIEQLANATANTKAHQAPFRNILFYGPPGTGKTMAARELA 419
Query: 409 RKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS 468
R+SGLDYA+MTGGDVAPLGAQAVTKIH++FDW+KKSK+GLLLFIDEADAFLCERN +MS
Sbjct: 420 RRSGLDYALMTGGDVAPLGAQAVTKIHQLFDWSKKSKRGLLLFIDEADAFLCERNKTYMS 479
Query: 469 EAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPREEERFXXXX 528
EAQRSALNALLFRTGDQS+DIVL LATNRPGDLDSA+ DRIDE +EFPLP EEERF
Sbjct: 480 EAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDETLEFPLPGEEERFKLLN 539
Query: 529 XXXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMA 588
L LFKK+QQ I IK +++++++EAA KT+GFSGREIAKLMA
Sbjct: 540 LYLEKYISKTNLKKPGLLQS-LFKKEQQTIEIKGVTEDLLKEAAAKTKGFSGREIAKLMA 598
Query: 589 SVQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIKLA 625
SVQAAVY +C+LD+ LFREV++YKV EH QR KLA
Sbjct: 599 SVQAAVYGSANCLLDANLFREVIDYKVAEHQQRKKLA 635
>UNIPROTKB|A7YWC4 [details] [associations]
symbol:ATAD3 "ATPase family AAA domain-containing protein
3" species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0042645 GO:GO:0017111 EMBL:BC134487 IPI:IPI00690620
RefSeq:NP_001098932.1 UniGene:Bt.64948 ProteinModelPortal:A7YWC4
STRING:A7YWC4 PRIDE:A7YWC4 Ensembl:ENSBTAT00000012676 GeneID:784353
KEGG:bta:784353 CTD:55210 eggNOG:COG1223
GeneTree:ENSGT00560000077230 HOGENOM:HOG000231291
HOVERGEN:HBG058506 InParanoid:A7YWC4 OMA:MMDTRVQ OrthoDB:EOG4ZCT46
NextBio:20926644 InterPro:IPR021911 Pfam:PF12037 Uniprot:A7YWC4
Length = 586
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 200/543 (36%), Positives = 298/543 (54%)
Query: 100 RKQEQTRLAELDVEKVHYEAIQSQ-VDVERQRKLAEEHRNLVQQKA-QARAQGLRNEDEL 157
R+ E +R A+ E + +Q Q + +E Q KL E + Q K Q R Q L
Sbjct: 62 RELEHSRHAK---EALSLAQMQEQTLQLEHQAKLKEYEAAVEQLKGDQIRVQAEERRKTL 118
Query: 158 ARKRLQTDHEAQRRHNTELVKMQEESSIRKEQAR-----RSTEEQIQAQQ---RLTEKER 209
+ + Q H+A+ ++ +L + + E ++++Q R EE +Q Q+ R T +
Sbjct: 119 SEETRQ--HQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEALRRATVERE 176
Query: 210 AEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGV 269
E+ + ++ AEA RA + D R + + R+ L +I T + EG
Sbjct: 177 MELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTILESIRTAGTLFGEGF 236
Query: 270 RSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPWSG 329
R+ +TD +K+ TV G T LA GIY+ + V Y+ LG+PSL+RE+S +
Sbjct: 237 RAFVTDWDKVTATVAGLTLLAVGIYSAKNATSVAGRYIEARLGKPSLVRETS--RITVLE 294
Query: 330 LLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRN 389
L + +V R S P +A++ ++L PSL+ R++ +A AT NTK +++ +RN
Sbjct: 295 ALRHPI-QVSRRLLSK----PQDALEG---VVLSPSLEARVRDIAIATRNTKKNKSLYRN 346
Query: 390 MLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGLL 449
+L YGPPGTGKT+ A+++A SG+DYA+MTGGDVAP+G VT +H++FDWA S++GLL
Sbjct: 347 VLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGRDGVTAMHKVFDWASTSRRGLL 406
Query: 450 LFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRI 509
LF+DEADAFL +R + +SE R+ LNA L RTG S +LVLA+N+P D AI DRI
Sbjct: 407 LFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSSKFMLVLASNQPEQFDWAINDRI 466
Query: 510 DEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNVIQ 569
DE++ F LP+ EER D LK KQ+ K+ D
Sbjct: 467 DEMVSFELPQREERERLVRMYF---------DKYVLKPA-TEGKQRLKLAQFDYGKKC-S 515
Query: 570 EAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIK-LAAEG 628
E A+ TEG SGREI++L + QA YA D VL + V+ +++H Q+++ L AEG
Sbjct: 516 EIAQLTEGMSGREISQLAVAWQAMAYASEDGVLTEAMMDARVQDAIQQHRQKMQWLKAEG 575
Query: 629 SQP 631
SQP
Sbjct: 576 SQP 578
Score = 305 (112.4 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 90/274 (32%), Positives = 134/274 (48%)
Query: 52 EQTADAQKSREP-EEPRGSGFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQTRLAEL 110
E + D P + + S FDP SRHA+EA + + QEQT E
Sbjct: 29 EGSGDGGAGDRPGPKDKWSNFDPTGLERAAKAARELEHSRHAKEALSLAQMQEQTLQLEH 88
Query: 111 DVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKA---QARAQGLRNEDELARKRLQTDHE 167
+ YEA Q+ ++ R AEE R + ++ QARAQ +D+LAR+R + +
Sbjct: 89 QAKLKEYEAAVEQLKGDQIRVQAEERRKTLSEETRQHQARAQ---YQDKLARQRYEDQLK 145
Query: 168 AQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEG 227
Q+ N E ++ QEES ++E RR+T E+ + L K E +RV+A EA
Sbjct: 146 QQQLLNEENLRKQEESVQKQEALRRATVER---EMELRHKN------EMLRVEA--EARA 194
Query: 228 RAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGAT 287
RA + D R + + R+ L +I T + EG R+ +TD +K+ TV G T
Sbjct: 195 RAKAERENADIIREQIRLKAAEHRQTILESIRTAGTLFGEGFRAFVTDWDKVTATVAGLT 254
Query: 288 ALAAGIYTTREGARVTWGYVNRILGQPSLIRESS 321
LA GIY+ + V Y+ LG+PSL+RE+S
Sbjct: 255 LLAVGIYSAKNATSVAGRYIEARLGKPSLVRETS 288
>UNIPROTKB|F1RJE4 [details] [associations]
symbol:LOC100525876 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0017111
GeneTree:ENSGT00560000077230 InterPro:IPR021911 Pfam:PF12037
OMA:QRYDEQM EMBL:FP102593 Ensembl:ENSSSCT00000003712 Uniprot:F1RJE4
Length = 593
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 198/543 (36%), Positives = 297/543 (54%)
Query: 100 RKQEQTRLAELDVEKVHYEAIQSQ-VDVERQRKLAEEHRNLVQQKA-QARAQGLRNEDEL 157
R+ E +R A+ E + +Q Q + +E+Q KL E + Q K+ Q R Q L
Sbjct: 62 RELEHSRHAK---EALSLAQMQEQTLQLEQQAKLKEYEAAVEQLKSEQIRVQAEERRKTL 118
Query: 158 ARKRLQTDHEAQRRHNTELVKMQEESSIRKEQAR-----RSTEEQIQAQQ---RLTEKER 209
+ + Q H+A+ ++ +L + + E ++++Q R EE +Q Q+ R T +
Sbjct: 119 SEETRQ--HQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEALRRATVERE 176
Query: 210 AEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGV 269
E+ + ++ AEA RA + D R + + R+ L +I T + EG
Sbjct: 177 MELRHKNEMLRVEAEARARAKAERENADITREQIRLKAAEHRQTILESIRTAGTLFGEGF 236
Query: 270 RSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPWSG 329
R+ +TD +K+ TV G T LA G+Y+ + V YV LG+PSL+RE+S +
Sbjct: 237 RAFVTDWDKVTATVAGLTLLALGVYSAKNATSVAGRYVEARLGKPSLVRETS--RITALE 294
Query: 330 LLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRN 389
L + +V R S P +A++ ++L PSL+ R++ LA AT NT+ +++ +RN
Sbjct: 295 ALRHPV-QVGRRLLSK----PQDALEG---VVLSPSLEARVRDLAIATRNTRKNRSLYRN 346
Query: 390 MLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGLL 449
+L YGPPGTGKT+ A+++A SG+DYA+MTGGDVAP+G VT +H++FDWA S++GLL
Sbjct: 347 VLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGRDGVTAVHKVFDWASTSRRGLL 406
Query: 450 LFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRI 509
LF+DEADAFL +R + +SE R+ LNA L RTG S +LVLA+N+P D AI DRI
Sbjct: 407 LFVDEADAFLRKRATEKISEGLRAPLNAFLHRTGQHSSKFMLVLASNQPEQFDWAINDRI 466
Query: 510 DEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNVIQ 569
DE++ F LPR EER D LK KQ+ K+ D
Sbjct: 467 DEIVSFDLPRREERERLVRMYF---------DKHVLKPA-TEGKQRLKLAQFDYGKKC-S 515
Query: 570 EAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIK-LAAEG 628
E A TEG SGREI++L + QA YA D VL + V+ +++H Q+++ L AE
Sbjct: 516 EIAELTEGMSGREISQLAVAWQAMAYASEDGVLTEAMMDARVQDAIQQHRQKMQWLKAEA 575
Query: 629 SQP 631
+ P
Sbjct: 576 ASP 578
Score = 312 (114.9 bits), Expect = 5.0e-25, P = 5.0e-25
Identities = 90/264 (34%), Positives = 130/264 (49%)
Query: 61 REPEEPRGSGFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQTRLAELDVEKVHYEAI 120
R + + S FDP SRHA+EA + + QEQT E + YEA
Sbjct: 39 RPAPKDKWSNFDPTGLERAAKAARELEHSRHAKEALSLAQMQEQTLQLEQQAKLKEYEAA 98
Query: 121 QSQVDVERQRKLAEEHRNLVQQKA---QARAQGLRNEDELARKRLQTDHEAQRRHNTELV 177
Q+ E+ R AEE R + ++ QARAQ +D+LAR+R + + Q+ N E +
Sbjct: 99 VEQLKSEQIRVQAEERRKTLSEETRQHQARAQ---YQDKLARQRYEDQLKQQQLLNEENL 155
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEAKLTED 237
+ QEES ++E RR+T E+ + E R E E R +A AE E A +T +
Sbjct: 156 RKQEESVQKQEALRRATVEREMELRHKNEMLRVEAEA---RARAKAEREN----ADITRE 208
Query: 238 HNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGATALAAGIYTTR 297
R E R+ L +I T + EG R+ +TD +K+ TV G T LA G+Y+ +
Sbjct: 209 QIRLKAAEH----RQTILESIRTAGTLFGEGFRAFVTDWDKVTATVAGLTLLALGVYSAK 264
Query: 298 EGARVTWGYVNRILGQPSLIRESS 321
V YV LG+PSL+RE+S
Sbjct: 265 NATSVAGRYVEARLGKPSLVRETS 288
>ZFIN|ZDB-GENE-040426-1826 [details] [associations]
symbol:atad3b "ATPase family, AAA domain
containing 3B" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 ZFIN:ZDB-GENE-040426-1826 GO:GO:0005524 GO:GO:0017111
HOVERGEN:HBG058506 InterPro:IPR021911 Pfam:PF12037 CTD:83858
EMBL:BC065962 IPI:IPI00505466 RefSeq:NP_991266.1 UniGene:Dr.79319
ProteinModelPortal:Q6NZU8 PRIDE:Q6NZU8 GeneID:403004
KEGG:dre:403004 HOGENOM:HOG000293212 NextBio:20816811 Bgee:Q6NZU8
Uniprot:Q6NZU8
Length = 621
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 192/541 (35%), Positives = 300/541 (55%)
Query: 100 RKQEQTRLAE--LDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKA-QARAQGLRNEDE 156
R+ +Q+R A+ LD+ ++ + +Q +E Q K+ E + Q K Q R Q
Sbjct: 57 RELDQSRHAKEALDLARMQEQTVQ----MEHQGKIKEYEAAVEQLKGEQIRIQADERRKT 112
Query: 157 LARKRLQTDHEAQRRHNTELVKMQEESSIRK-----EQARRSTEEQIQAQQ---RLTEKE 208
L + Q H+A+ ++ +L + + + +R+ E+ R EE +Q Q+ R T +
Sbjct: 113 LNEETRQ--HQARAQYQDKLARQRYDDQLRQQTLLNEENLRKQEESVQKQEAMRRATIEH 170
Query: 209 RAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEG 268
++ + ++ AE++ RA + D R + + R+ L +I T + EG
Sbjct: 171 EMDLRHKNEMLRVEAESKARARVERENADIIREQIRLKAAEHRQTVLESIRTAGAVFGEG 230
Query: 269 VRSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPWS 328
R+ ++D +K+ TV G T LAAG+Y+ R V Y+ LG+PSL+RE+S +F +
Sbjct: 231 FRAFISDWDKVTATVAGLTLLAAGVYSARNATAVAGRYIEARLGKPSLVRETS--RFTVA 288
Query: 329 GLLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFR 388
L + KV++ S P +A++ ++L P L+ R++ +A AT NT+ ++ +R
Sbjct: 289 EALKHPI-KVVKRLQSK----PQDALEG---VVLSPPLEERVRDIAIATRNTRQNRGLYR 340
Query: 389 NMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGL 448
N+L YGPPGTGKT+ A+++A SG+DYA+MTGGDVAP+G VT +H++FDWA S++GL
Sbjct: 341 NILMYGPPGTGKTLFAKKLAVHSGMDYAIMTGGDVAPMGRDGVTAMHKVFDWAATSRRGL 400
Query: 449 LLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDR 508
LLF+DEADAFL +R++ +SE R+ LNA L+RTG+QS +LVLA+N+P D AI DR
Sbjct: 401 LLFVDEADAFLRKRSTEKISEDLRATLNAFLYRTGEQSNKFMLVLASNQPEQFDWAINDR 460
Query: 509 IDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNVI 568
IDE++ F LP EER D G +Q+ K+ D
Sbjct: 461 IDEIVNFMLPGPEERERLVRLYF------DRYVLEPATGG----RQRLKLAQFDYGQKC- 509
Query: 569 QEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIK-LAAE 627
E A++ EG SGREI+KL + QAA Y+ D VL + V+ V +H Q++ L E
Sbjct: 510 SEIAKRVEGMSGREISKLGVAWQAAAYSSEDGVLSEAMIDARVDAAVRQHRQKMDWLHGE 569
Query: 628 G 628
G
Sbjct: 570 G 570
Score = 306 (112.8 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 94/286 (32%), Positives = 144/286 (50%)
Query: 62 EPEEPRGSGFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQTRLAELDVEKVHYEAIQ 121
+P++ + S FDP + SRHA+EA D+ R QEQT E + YEA
Sbjct: 36 KPKD-KWSNFDPTGLERAAQAARELDQSRHAKEALDLARMQEQTVQMEHQGKIKEYEAAV 94
Query: 122 SQVDVERQRKLAEEHRNLVQQKA---QARAQGLRNEDELARKRLQTDHEAQRRHNTELVK 178
Q+ E+ R A+E R + ++ QARAQ +D+LAR+R Q N E ++
Sbjct: 95 EQLKGEQIRIQADERRKTLNEETRQHQARAQ---YQDKLARQRYDDQLRQQTLLNEENLR 151
Query: 179 MQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEAKLTEDH 238
QEES ++E RR+T I+ + L K E +RV+A E++ RA + D
Sbjct: 152 KQEESVQKQEAMRRAT---IEHEMDLRHKN------EMLRVEA--ESKARARVERENADI 200
Query: 239 NRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGATALAAGIYTTRE 298
R + + R+ L +I T + EG R+ ++D +K+ TV G T LAAG+Y+ R
Sbjct: 201 IREQIRLKAAEHRQTVLESIRTAGAVFGEGFRAFISDWDKVTATVAGLTLLAAGVYSARN 260
Query: 299 GARVTWGYVNRILGQPSLIRESSIGKFPWSGLLSQAMNKVIRNKTS 344
V Y+ LG+PSL+RE+S +F + L + KV++ S
Sbjct: 261 ATAVAGRYIEARLGKPSLVRETS--RFTVAEALKHPI-KVVKRLQS 303
>WB|WBGene00010015 [details] [associations]
symbol:atad-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0035046
"pronuclear migration" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0007005 "mitochondrion
organization" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0009792
GO:GO:0035046 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0006915 GO:GO:0002119 GO:GO:0005743 GO:GO:0018996
GO:GO:0000910 GO:GO:0042645 GO:GO:0017111 GO:GO:0007005
eggNOG:COG1223 GeneTree:ENSGT00560000077230 HOGENOM:HOG000231291
InterPro:IPR021911 Pfam:PF12037 EMBL:Z48583 PIR:T22612
RefSeq:NP_496210.2 HSSP:P28691 ProteinModelPortal:Q20748 SMR:Q20748
IntAct:Q20748 STRING:Q20748 PaxDb:Q20748 EnsemblMetazoa:F54B3.3
GeneID:174590 KEGG:cel:CELE_F54B3.3 UCSC:F54B3.3.1 CTD:174590
WormBase:F54B3.3 InParanoid:Q20748 OMA:NSKMAYS NextBio:884680
Uniprot:Q20748
Length = 595
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 197/549 (35%), Positives = 302/549 (55%)
Query: 103 EQTRLAELDVEKVHY--EAIQ-SQV-DVERQRKLAEEHRNLVQQKAQARAQGLRNEDELA 158
E+ A D+EK EA++ S++ +V RQ+++ E + + Q A +++ +R +E
Sbjct: 53 ERAAKAARDLEKFPNAKEALELSRMQEVTRQKEVENETKKIEAQLANMKSEHIRVAEEER 112
Query: 159 RKRL--QTDHEAQR-RHNTELVKM--QEESSIR---KEQARRSTEEQIQAQQRL---TEK 207
RK L +T H R + +L + +EE +++ +E++ R EE ++ Q++L T +
Sbjct: 113 RKTLGEETKHAHSRAEYQDQLARKRAEEELAMKARMQEESLRKQEESVKKQEQLRKQTIE 172
Query: 208 ERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEE 267
++ + K AE RA A+ D N + R+ + I T+ I
Sbjct: 173 HELALKHKYELEKIDAETRARAKAARDNRDVNLEQMKLHEEENRKTVIEKIKTSGELIGS 232
Query: 268 GVRSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPW 327
G+ L D+ K+ VGG TALA G YT + G VT Y+ LG+PSL+RE+S +
Sbjct: 233 GLNQFLNDKTKIAAAVGGLTALAVGWYTAKRGTGVTARYIESRLGKPSLVRETS--RITP 290
Query: 328 SGLLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPF 387
+L + V + P+ NG ++L P+L+RR++ +A T+NTK + F
Sbjct: 291 LEVLKHPIKSV--QMMTRQKKDPL-----NG-VVLPPALERRLRDIAITTSNTKRNNGLF 342
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKG 447
RN++FYGPPGTGKT+ A+ +A+ SGLDYA++TGGD+APLG V+ IH++FDWA KS+KG
Sbjct: 343 RNVMFYGPPGTGKTLFAKSLAQHSGLDYAVLTGGDIAPLGRDGVSAIHKVFDWASKSRKG 402
Query: 448 LLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITD 507
L++FIDEADAFL +R+ MSE R+ALNA LFRTG+QSR +LV+A+N+P D A+ D
Sbjct: 403 LIVFIDEADAFLQKRSKNGMSEDTRAALNAFLFRTGEQSRKFMLVVASNQPEQFDWAVND 462
Query: 508 RIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNV 567
R D+++EF LP EER + S + Q+ K+ D
Sbjct: 463 RFDQLVEFTLPGMEERERILLQYFNEHIVTPATSGS--------RSQRLKLDNFDWVAKC 514
Query: 568 IQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLF-REVVEYKVEEHHQRIKLAA 626
E A+KT G SGRE++KL+ QA+ YA VL + R + V+ H+ L
Sbjct: 515 -NEVAKKTSGMSGRELSKLVIGWQASAYASETGVLTEAIVDRNTADAMVQHEHKMEWLEK 573
Query: 627 EGSQPTKNQ 635
E + +NQ
Sbjct: 574 EQLK-ARNQ 581
Score = 290 (107.1 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 85/273 (31%), Positives = 129/273 (47%)
Query: 52 EQTADAQKSREPEEPRGSGFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQTRLAELD 111
+Q Q+ +E FD +A+EA ++ R QE TR E++
Sbjct: 29 QQPGQGQR-QEGNSKMAYSFDSTALERAAKAARDLEKFPNAKEALELSRMQEVTRQKEVE 87
Query: 112 VEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTDHEAQRR 171
E EA + + E R EE R + ++ + +D+LARKR + + + R
Sbjct: 88 NETKKIEAQLANMKSEHIRVAEEERRKTLGEETKHAHSRAEYQDQLARKRAEEELAMKAR 147
Query: 172 HNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGR--- 228
E ++ QEES ++EQ R+ T E A + E E+ I+ ET R +A A + R
Sbjct: 148 MQEESLRKQEESVKKQEQLRKQTIEHELALKHKYELEK--IDAET-RARAKAARDNRDVN 204
Query: 229 AHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGATA 288
+ KL E+ NR+ +IE+I T+ I G+ L D+ K+ VGG TA
Sbjct: 205 LEQMKLHEEENRKTVIEKIK-----------TSGELIGSGLNQFLNDKTKIAAAVGGLTA 253
Query: 289 LAAGIYTTREGARVTWGYVNRILGQPSLIRESS 321
LA G YT + G VT Y+ LG+PSL+RE+S
Sbjct: 254 LAVGWYTAKRGTGVTARYIESRLGKPSLVRETS 286
>UNIPROTKB|E1BRY8 [details] [associations]
symbol:ATAD3A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005743 GO:GO:0017111 GeneTree:ENSGT00560000077230
InterPro:IPR021911 Pfam:PF12037 OMA:QRYDEQM EMBL:AADN02040864
IPI:IPI00582603 Ensembl:ENSGALT00000002304 Uniprot:E1BRY8
Length = 604
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 200/557 (35%), Positives = 301/557 (54%)
Query: 96 FDIMRKQEQTRLA-ELDVEKVHYEAI-----QSQ-VDVERQRKLAEEHRNLVQQK-AQAR 147
FD + + A ELD + +A+ Q Q + +E+Q KL E + Q K Q R
Sbjct: 57 FDPTGLERAAKAARELDASRHAKDALSLAQMQEQTLQLEQQAKLKEYEAAIEQLKNEQIR 116
Query: 148 AQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQAR-----RSTEEQIQAQQ 202
Q L+ + Q H+A+ ++ +L + + + +R++Q R EE +Q Q+
Sbjct: 117 VQAEERRKTLSEETKQ--HQARAQYQDKLARQRYDEQMRQQQLANEENLRKQEESVQKQE 174
Query: 203 ---RLTEKERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAIN 259
R T + E+ + ++ AEA RA + D R + + R+ L ++
Sbjct: 175 AMRRATVEREMELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTVLESLK 234
Query: 260 TTFSHIEEGVRSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRE 319
T EG R+ +TD +K+ TV G T LA G+Y+ + V Y+ LG+PSL+RE
Sbjct: 235 TAGMLFGEGFRAFVTDWDKVTATVAGLTLLAVGVYSAKNATAVAGRYIEARLGKPSLVRE 294
Query: 320 SSIGKFPWSGLLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATAN 379
+S + L + KV + TS +A++ ++L P L+ R++ +A AT N
Sbjct: 295 TS--RITVLEALKHPI-KVGKRLTSKAQ----DALEG---VVLSPQLEARVRDIAIATRN 344
Query: 380 TKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFD 439
TK +++ +RN+L YGPPGTGKT+ A+++A SG+DYA+MTGGDVAP+G + VT IH++FD
Sbjct: 345 TKKNKSLYRNILMYGPPGTGKTLFAKKLAVHSGMDYAIMTGGDVAPMGREGVTAIHKLFD 404
Query: 440 WAKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPG 499
WA S++GLLLF+DEADAFL +R + +SE R+ LNA L RTG S +LVLA+N+P
Sbjct: 405 WANTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSNKFMLVLASNQPE 464
Query: 500 DLDSAITDRIDEVIEFPLPR--EEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQK 557
D AI DRIDE++ F LP+ E ER + EG KQ+ K
Sbjct: 465 QFDWAINDRIDEMVNFDLPQLEERERLVRMYFDRHVLKPATEG------------KQRLK 512
Query: 558 ITIKDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEE 617
+ D E AR TEG SGREI++L + QAA YA D VL + V V++
Sbjct: 513 LAQFDYGKKC-SEIARLTEGMSGREISQLAVAWQAAAYASEDGVLTEAMIDARVADAVQQ 571
Query: 618 HHQRIK-LAAEGSQPTK 633
H Q+++ L AEG++ +K
Sbjct: 572 HRQKMEWLKAEGAEASK 588
Score = 303 (111.7 bits), Expect = 5.5e-24, P = 5.5e-24
Identities = 86/264 (32%), Positives = 130/264 (49%)
Query: 61 REPEEPRGSGFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQTRLAELDVEKVHYEAI 120
R + + S FDP ++SRHA++A + + QEQT E + YEA
Sbjct: 47 RSTPKDKWSNFDPTGLERAAKAARELDASRHAKDALSLAQMQEQTLQLEQQAKLKEYEAA 106
Query: 121 QSQVDVERQRKLAEEHRNLVQQKA---QARAQGLRNEDELARKRLQTDHEAQRRHNTELV 177
Q+ E+ R AEE R + ++ QARAQ +D+LAR+R Q+ N E +
Sbjct: 107 IEQLKNEQIRVQAEERRKTLSEETKQHQARAQ---YQDKLARQRYDEQMRQQQLANEENL 163
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEAKLTED 237
+ QEES ++E RR+T E+ + L K E +RV+A EA RA + D
Sbjct: 164 RKQEESVQKQEAMRRATVER---EMELRHKN------EMLRVEA--EARARAKAERENAD 212
Query: 238 HNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGATALAAGIYTTR 297
R + + R+ L ++ T EG R+ +TD +K+ TV G T LA G+Y+ +
Sbjct: 213 IIREQIRLKAAEHRQTVLESLKTAGMLFGEGFRAFVTDWDKVTATVAGLTLLAVGVYSAK 272
Query: 298 EGARVTWGYVNRILGQPSLIRESS 321
V Y+ LG+PSL+RE+S
Sbjct: 273 NATAVAGRYIEARLGKPSLVRETS 296
>UNIPROTKB|H0Y2W2 [details] [associations]
symbol:ATAD3A "ATPase family AAA domain-containing protein
3A" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR021911 Pfam:PF12037 EMBL:AL645728 HGNC:HGNC:25567
ChiTaRS:ATAD3A ProteinModelPortal:H0Y2W2 PRIDE:H0Y2W2
Ensembl:ENST00000339113 Bgee:H0Y2W2 Uniprot:H0Y2W2
Length = 572
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 194/520 (37%), Positives = 290/520 (55%)
Query: 120 IQSQ-VDVERQRKLAEEHRNLVQQKA-QARAQGLRNEDELARKRLQTDHEAQRRHNTELV 177
+Q Q + +E+Q KL E + Q K+ Q RAQ L+ + Q H+A+ ++ +L
Sbjct: 66 MQEQTLQLEQQSKLKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQ--HQARAQYQDKLA 123
Query: 178 KMQEESSIRKEQAR-----RSTEEQIQAQQ---RLTEKERAEIERETIRVKAMAEAEGRA 229
+ + E ++++Q R EE +Q Q+ R T + E+ + ++ AEA RA
Sbjct: 124 RQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRHKNEMLRVEAEARARA 183
Query: 230 HEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGATAL 289
+ D R + + R+ L +I T + EG R+ +TD +K+ TV G T L
Sbjct: 184 KAERENADIIREQIRLKAAEHRQTVLESIRTAGTLFGEGFRAFVTDWDKVTATVAGLTLL 243
Query: 290 AAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPWSGLLSQAMNKVIRNKTSAGTAG 349
A G+Y+ + V ++ LG+PSL+RE+S + L + +V R S
Sbjct: 244 AVGVYSAKNATLVAGRFIEARLGKPSLVRETS--RITVLEALRHPI-QVSRRLLSR---- 296
Query: 350 PVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIAR 409
P +A++ ++L PSL+ R++ +A AT NTK +++ +RN+L YGPPGTGKT+ A+++A
Sbjct: 297 PQDALEG---VVLSPSLEARVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLAL 353
Query: 410 KSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMSE 469
SG+DYA+MTGGDVAP+G + VT +H++FDWA S++GLLLF+DEADAFL +R + +SE
Sbjct: 354 HSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFVDEADAFLRKRATEKISE 413
Query: 470 AQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPREEERFXXXXX 529
R+ LNA L+RTG S +LVLA+N+P D AI DRI+E++ F LP +EER
Sbjct: 414 DLRATLNAFLYRTGQHSNKFMLVLASNQPEQFDWAINDRINEMVHFDLPGQEERERLVRM 473
Query: 530 XXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMAS 589
D LK KQ+ K+ D E AR TEG SGREIA+L S
Sbjct: 474 YF---------DKYVLKPA-TEGKQRLKLAQFDYGRKC-SEVARLTEGMSGREIAQLAVS 522
Query: 590 VQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIK-LAAEG 628
QA YA D VL + V+ V++H Q++ L AEG
Sbjct: 523 WQATAYASEDGVLTEAMMDTRVQDAVQQHQQKMCWLKAEG 562
Score = 272 (100.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 79/238 (33%), Positives = 125/238 (52%)
Query: 87 NSSRHAREAFDIMRKQEQTRLAELDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKA-- 144
+ S +A++A ++ + QEQT E + YEA Q+ E+ R AEE R + ++
Sbjct: 52 SGSGYAKDALNLAQMQEQTLQLEQQSKLKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQ 111
Query: 145 -QARAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQR 203
QARAQ +D+LAR+R + + Q+ N E ++ QEES ++E RR+T E+ +
Sbjct: 112 HQARAQ---YQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVER---EME 165
Query: 204 LTEKERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFS 263
L K E +RV+A EA RA + D R + + R+ L +I T +
Sbjct: 166 LRHKN------EMLRVEA--EARARAKAERENADIIREQIRLKAAEHRQTVLESIRTAGT 217
Query: 264 HIEEGVRSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESS 321
EG R+ +TD +K+ TV G T LA G+Y+ + V ++ LG+PSL+RE+S
Sbjct: 218 LFGEGFRAFVTDWDKVTATVAGLTLLAVGVYSAKNATLVAGRFIEARLGKPSLVRETS 275
>MGI|MGI:1919214 [details] [associations]
symbol:Atad3a "ATPase family, AAA domain containing 3A"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016049 "cell growth"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 MGI:MGI:1919214 GO:GO:0016021 GO:GO:0005524
GO:GO:0005743 GO:GO:0042645 GO:GO:0017111 EMBL:AL670236
EMBL:CH466594 CTD:55210 eggNOG:COG1223 GeneTree:ENSGT00560000077230
HOGENOM:HOG000231291 HOVERGEN:HBG058506 OrthoDB:EOG4ZCT46
InterPro:IPR021911 Pfam:PF12037 EMBL:AF343079 EMBL:AK075921
EMBL:AK148974 EMBL:AK149702 EMBL:AK150037 EMBL:AK166099
EMBL:AK172038 EMBL:AK173141 EMBL:BC023301 EMBL:BC058373
EMBL:BC060036 IPI:IPI00126913 IPI:IPI00464208 RefSeq:NP_849534.2
UniGene:Mm.241152 ProteinModelPortal:Q925I1 SMR:Q925I1
DIP:DIP-32373N IntAct:Q925I1 STRING:Q925I1 PhosphoSite:Q925I1
PaxDb:Q925I1 PRIDE:Q925I1 Ensembl:ENSMUST00000030903 GeneID:108888
KEGG:mmu:108888 InParanoid:Q925I1 OMA:QRYDEQM NextBio:361415
Bgee:Q925I1 CleanEx:MM_ATAD3A Genevestigator:Q925I1
GermOnline:ENSMUSG00000029036 Uniprot:Q925I1
Length = 591
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 198/547 (36%), Positives = 298/547 (54%)
Query: 100 RKQEQTRLAELDVEKVHYEAIQSQ-VDVERQRKLAEEHRNLVQQKA-QARAQGLRNEDEL 157
R+ E +R A+ E + +Q Q + +E+Q KL E + Q K+ Q R Q L
Sbjct: 62 RELEHSRHAK---EALSLAQMQEQTLQLEQQSKLKEYEAAVEQLKSEQIRVQAEERRKTL 118
Query: 158 ARKRLQTDHEAQRRHNTELVKMQEESSIRKEQAR-----RSTEEQIQAQQ---RLTEKER 209
+ Q H+A+ ++ +L + + E ++++Q R EE +Q Q+ R T +
Sbjct: 119 TEETRQ--HQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAIRRATVERE 176
Query: 210 AEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGV 269
E+ + ++ AEA RA + D R + + R+ L +I T + + EG
Sbjct: 177 MELRHKNEMLRVEAEARARAKADRENADIIREQIRLKAAEHRQTILESIRTAGTLLGEGF 236
Query: 270 RSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPWSG 329
R+ +TD +K+ TV G T LA G+Y+ + V Y+ LG+PSL+RE+S +
Sbjct: 237 RAFVTDWDKVTATVAGLTLLAVGVYSAKNATSVAGRYIEARLGKPSLVRETS--RISVLE 294
Query: 330 LLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRN 389
L + +V R S P +A++ +IL PSL+ R++ +A AT NTK +++ +RN
Sbjct: 295 ALRHPI-QVSRRLVSR----PQDALEG---VILSPSLEARVRDIAIATRNTKKNKSLYRN 346
Query: 390 MLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGLL 449
+L YGPPGTGKT+ A+++A SG+DYA+MTGGDVAP+G + VT +H++FDWA S++GLL
Sbjct: 347 VLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKVFDWASTSRRGLL 406
Query: 450 LFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRI 509
LF+DEADAFL +R + +SE R+ LNA L RTG S +LVLA+N+P D AI DRI
Sbjct: 407 LFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSSKFMLVLASNQPEQFDWAINDRI 466
Query: 510 DEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNVIQ 569
DE++ F LP+ EER D LK KQ+ K+ D
Sbjct: 467 DEMVCFALPQREERERLVRMYF---------DKYVLKPA-TEGKQRLKVAQFDYGKKC-S 515
Query: 570 EAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQR---IKLAA 626
E A+ TEG SGREIA+L + QA Y+ D VL + V+ V++H Q+ +K+
Sbjct: 516 EVAQLTEGMSGREIAQLAVAWQAMAYSSEDGVLTEAMMDARVQDAVQQHQQKMQWLKVER 575
Query: 627 EGSQPTK 633
SQ K
Sbjct: 576 PDSQTNK 582
Score = 308 (113.5 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 91/275 (33%), Positives = 135/275 (49%)
Query: 51 AEQTADAQKSREPE-EPRGSGFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQTRLAE 109
AE D P + + S FDP SRHA+EA + + QEQT E
Sbjct: 28 AEGGGDRGAGDRPSPKDKWSNFDPTGLERAAKAARELEHSRHAKEALSLAQMQEQTLQLE 87
Query: 110 LDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKA---QARAQGLRNEDELARKRLQTDH 166
+ YEA Q+ E+ R AEE R + ++ QARAQ +D+LAR+R +
Sbjct: 88 QQSKLKEYEAAVEQLKSEQIRVQAEERRKTLTEETRQHQARAQ---YQDKLARQRYEDQL 144
Query: 167 EAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAE 226
+ Q+ N E ++ QEES ++E RR+T E+ + L K E +RV+A EA
Sbjct: 145 KQQQLLNEENLRKQEESVQKQEAIRRATVER---EMELRHKN------EMLRVEA--EAR 193
Query: 227 GRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGA 286
RA + D R + + R+ L +I T + + EG R+ +TD +K+ TV G
Sbjct: 194 ARAKADRENADIIREQIRLKAAEHRQTILESIRTAGTLLGEGFRAFVTDWDKVTATVAGL 253
Query: 287 TALAAGIYTTREGARVTWGYVNRILGQPSLIRESS 321
T LA G+Y+ + V Y+ LG+PSL+RE+S
Sbjct: 254 TLLAVGVYSAKNATSVAGRYIEARLGKPSLVRETS 288
>UNIPROTKB|E2QZ61 [details] [associations]
symbol:ATAD3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0017111
GeneTree:ENSGT00560000077230 InterPro:IPR021911 Pfam:PF12037
OMA:QRYDEQM CTD:83858 EMBL:AAEX03003847 RefSeq:XP_536708.2
Ensembl:ENSCAFT00000030573 GeneID:479568 KEGG:cfa:479568
NextBio:20854736 Uniprot:E2QZ61
Length = 591
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 195/545 (35%), Positives = 300/545 (55%)
Query: 100 RKQEQTRLAELDVEKVHYEAIQSQ-VDVERQRKLAEEHRNLVQQKA-QARAQGLRNEDEL 157
R+ E +R A+ E + +Q Q + +E+Q KL E + Q K+ Q R Q L
Sbjct: 62 RELEHSRHAK---EALSLAQMQEQTLQLEQQSKLKEYEAAVEQLKSEQIRVQAEERRKTL 118
Query: 158 ARKRLQTDHEAQRRHNTELVKMQEESSIRKEQAR-----RSTEEQIQAQQ---RLTEKER 209
+ + Q H+A+ ++ +L + + + ++++Q R EE +Q Q+ R T +
Sbjct: 119 SEETRQ--HQARAQYQDKLARQRYDDQLKQQQLLNEENLRKQEESVQKQEAMRRATVERE 176
Query: 210 AEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGV 269
E+ + ++ AEA RA + D R + + R+ L +I T + EG
Sbjct: 177 MELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTILESIRTAGTLFGEGF 236
Query: 270 RSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPWSG 329
R+ +TD +K+ TV G T LA G+Y+ + V Y+ LG+PSL+RE+S +
Sbjct: 237 RTFVTDWDKVTATVAGLTLLALGVYSAKNATSVAGRYIEARLGKPSLVRETS--RITVLE 294
Query: 330 LLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRN 389
L + +V R S P +A++ ++L PSL+ R++ +A AT NT +++ +RN
Sbjct: 295 ALRHPV-QVSRRLLSK----PQDALEG---VVLSPSLEARVRDIAIATRNTMKNRSLYRN 346
Query: 390 MLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGLL 449
+L YGPPGTGKT+ A+++A SG+DYA+MTGGDVAP+G VT +H++FDWA S++GLL
Sbjct: 347 ILAYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGRDGVTAMHKVFDWASTSRRGLL 406
Query: 450 LFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRI 509
LF+DEADAFL +R + +SE R+ LNA L RTG S +LVLA+N+P D A+ DRI
Sbjct: 407 LFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSSKFMLVLASNQPEQFDWAVNDRI 466
Query: 510 DEVIEFPLP-REE-ERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNV 567
DE++ F LP REE ER + EG KQ+ K+ D
Sbjct: 467 DEMVRFDLPGREERERLVRMYFDKYVLKPATEG------------KQRLKLAQFDYGKKC 514
Query: 568 IQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIK-LAA 626
E A+ TEG SGREI++L + QA YA D VL + V+ +++H Q+++ L A
Sbjct: 515 -SEIAQLTEGMSGREISQLAVAWQAMAYASEDGVLTEAMMDARVQDAMQQHQQKMQWLKA 573
Query: 627 EGSQP 631
EG++P
Sbjct: 574 EGTRP 578
Score = 304 (112.1 bits), Expect = 3.9e-24, P = 3.9e-24
Identities = 88/264 (33%), Positives = 130/264 (49%)
Query: 61 REPEEPRGSGFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQTRLAELDVEKVHYEAI 120
R + + S FDP SRHA+EA + + QEQT E + YEA
Sbjct: 39 RPAPKDKWSNFDPTGLERAAKAARELEHSRHAKEALSLAQMQEQTLQLEQQSKLKEYEAA 98
Query: 121 QSQVDVERQRKLAEEHRNLVQQKA---QARAQGLRNEDELARKRLQTDHEAQRRHNTELV 177
Q+ E+ R AEE R + ++ QARAQ +D+LAR+R + Q+ N E +
Sbjct: 99 VEQLKSEQIRVQAEERRKTLSEETRQHQARAQ---YQDKLARQRYDDQLKQQQLLNEENL 155
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEAKLTED 237
+ QEES ++E RR+T E+ + L K E +RV+A EA RA + D
Sbjct: 156 RKQEESVQKQEAMRRATVER---EMELRHKN------EMLRVEA--EARARAKAERENAD 204
Query: 238 HNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGATALAAGIYTTR 297
R + + R+ L +I T + EG R+ +TD +K+ TV G T LA G+Y+ +
Sbjct: 205 IIREQIRLKAAEHRQTILESIRTAGTLFGEGFRTFVTDWDKVTATVAGLTLLALGVYSAK 264
Query: 298 EGARVTWGYVNRILGQPSLIRESS 321
V Y+ LG+PSL+RE+S
Sbjct: 265 NATSVAGRYIEARLGKPSLVRETS 288
>UNIPROTKB|Q5T9A4 [details] [associations]
symbol:ATAD3B "ATPase family AAA domain-containing protein
3B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 EMBL:CH471183
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000231291
HOVERGEN:HBG058506 OrthoDB:EOG4ZCT46 InterPro:IPR021911
Pfam:PF12037 EMBL:AB033099 EMBL:AK128357 EMBL:AK290586
EMBL:AL157945 EMBL:BC002542 EMBL:BC009938 EMBL:BC018701
IPI:IPI00178879 IPI:IPI00306048 IPI:IPI00443780 RefSeq:NP_114127.3
UniGene:Hs.729021 ProteinModelPortal:Q5T9A4 SMR:Q5T9A4
IntAct:Q5T9A4 STRING:Q5T9A4 PhosphoSite:Q5T9A4 DMDM:74745646
PaxDb:Q5T9A4 PRIDE:Q5T9A4 Ensembl:ENST00000308647 GeneID:83858
KEGG:hsa:83858 UCSC:uc001afv.3 UCSC:uc001afw.2 UCSC:uc001afx.3
CTD:83858 GeneCards:GC01P001397 HGNC:HGNC:24007 MIM:612317
neXtProt:NX_Q5T9A4 PharmGKB:PA134993325 InParanoid:Q5T9A4
OMA:RGLLLFM PhylomeDB:Q5T9A4 ChiTaRS:ATAD3B GenomeRNAi:83858
NextBio:72857 ArrayExpress:Q5T9A4 Bgee:Q5T9A4 CleanEx:HS_ATAD3B
Genevestigator:Q5T9A4 GermOnline:ENSG00000160072 Uniprot:Q5T9A4
Length = 648
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 192/540 (35%), Positives = 298/540 (55%)
Query: 100 RKQEQTRLAELDVEKVHYEAIQSQ-VDVERQRKLAEEHRNLVQQKA-QARAQGLRNEDEL 157
R+ E +R A+ E ++ +Q Q + +E+Q KL E + Q K+ Q RAQ L
Sbjct: 63 RELEHSRYAK---EALNLAQMQEQTLQLEQQSKLKEYEAAVEQLKSEQIRAQAEERRKTL 119
Query: 158 ARKRLQTDHEAQRRHNTELVKMQEESSIRKEQAR-----RSTEEQIQAQQ---RLTEKER 209
+ + Q H+A+ ++ +L + + E ++++Q R EE +Q Q+ R T +
Sbjct: 120 SEETRQ--HQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVERE 177
Query: 210 AEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGV 269
E+ + ++ EA RA + D R + + + R+ L +I T + EG
Sbjct: 178 MELRHKNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGF 237
Query: 270 RSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPWSG 329
R+ +TDR+K+ TV G T LA G+Y+ + VT ++ LG+PSL+RE+S +
Sbjct: 238 RAFVTDRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGKPSLVRETS--RITVLE 295
Query: 330 LLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRN 389
L + +V R S P + ++ ++L PSL+ R++ +A AT NTK ++ +R+
Sbjct: 296 ALRHPI-QVSRRLLSR----PQDVLEG---VVLSPSLEARVRDIAIATRNTKKNRGLYRH 347
Query: 390 MLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGLL 449
+L YGPPGTGKT+ A+++A SG+DYA+MTGGDVAP+G + VT +H++FDWA S++GLL
Sbjct: 348 ILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLL 407
Query: 450 LFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRI 509
LF+DEADAFL +R + +S+ R+ LNA L+ G S +LVLA+N P D AI RI
Sbjct: 408 LFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRI 467
Query: 510 DEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNVIQ 569
D ++ F LP++EER D+ LK K++ K+ D
Sbjct: 468 DVMVHFDLPQQEERERLVRLHF---------DNCVLKPA-TEGKRRLKLAQFDYGRKC-S 516
Query: 570 EAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIK-LAAEG 628
E AR TEG SGREIA+L S QA YA D VL + V+ V+++ Q+++ L AEG
Sbjct: 517 EVARLTEGMSGREIAQLAVSWQATAYASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEG 576
Score = 311 (114.5 bits), Expect = 8.5e-25, P = 8.5e-25
Identities = 87/264 (32%), Positives = 134/264 (50%)
Query: 61 REPEEPRGSGFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQTRLAELDVEKVHYEAI 120
R + + S FDP SR+A+EA ++ + QEQT E + YEA
Sbjct: 40 RPAPKDKWSNFDPTGLERAAKAARELEHSRYAKEALNLAQMQEQTLQLEQQSKLKEYEAA 99
Query: 121 QSQVDVERQRKLAEEHRNLVQQKA---QARAQGLRNEDELARKRLQTDHEAQRRHNTELV 177
Q+ E+ R AEE R + ++ QARAQ +D+LAR+R + + Q+ N E +
Sbjct: 100 VEQLKSEQIRAQAEERRKTLSEETRQHQARAQ---YQDKLARQRYEDQLKQQQLLNEENL 156
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEAKLTED 237
+ QEES ++E RR+T E+ + L K E +RV+ EA RA + D
Sbjct: 157 RKQEESVQKQEAMRRATVER---EMELRHKN------EMLRVET--EARARAKAERENAD 205
Query: 238 HNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGATALAAGIYTTR 297
R + + + R+ L +I T + EG R+ +TDR+K+ TV G T LA G+Y+ +
Sbjct: 206 IIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVTDRDKVTATVAGLTLLAVGVYSAK 265
Query: 298 EGARVTWGYVNRILGQPSLIRESS 321
VT ++ LG+PSL+RE+S
Sbjct: 266 NATAVTGRFIEARLGKPSLVRETS 289
>RGD|1305964 [details] [associations]
symbol:Atad3a "ATPase family, AAA domain containing 3A"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016049 "cell growth"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
PROSITE:PS00674 SMART:SM00382 RGD:1305964 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0042645 GO:GO:0017111 CTD:55210
eggNOG:COG1223 GeneTree:ENSGT00560000077230 HOGENOM:HOG000231291
HOVERGEN:HBG058506 OrthoDB:EOG4ZCT46 InterPro:IPR021911
Pfam:PF12037 OMA:QRYDEQM EMBL:BC105762 IPI:IPI00365481
RefSeq:NP_001030094.1 UniGene:Rn.17450 ProteinModelPortal:Q3KRE0
IntAct:Q3KRE0 STRING:Q3KRE0 PRIDE:Q3KRE0 Ensembl:ENSRNOT00000045053
GeneID:298682 KEGG:rno:298682 InParanoid:Q3KRE0 NextBio:644164
ArrayExpress:Q3KRE0 Genevestigator:Q3KRE0 Uniprot:Q3KRE0
Length = 591
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 193/536 (36%), Positives = 299/536 (55%)
Query: 100 RKQEQTRLAELDVEKVHYEAIQSQ-VDVERQRKLAEEHRNLVQQKAQARAQGLRNEDELA 158
R+ E +R A+ E ++ +Q Q + +E+Q KL +E+ V+Q +++ +R + E
Sbjct: 62 RELEHSRHAK---EALNLAQMQEQTLQLEQQSKL-KEYEAAVEQ---LKSEQIRVQAEER 114
Query: 159 RKRLQTD---HEAQRRHNTELVKMQEESSIRKEQAR-----RSTEEQIQAQQ---RLTEK 207
RK L + H+A+ ++ +L + + E ++++Q R EE +Q Q+ R T +
Sbjct: 115 RKTLNEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAIRRATVE 174
Query: 208 ERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEE 267
E+ + ++ AEA RA + D R + + R+ L +I T + E
Sbjct: 175 REMELRHKNEMLRVEAEARARAKADRENADIIREQIRLKAAEHRQTILESIRTAGTLFGE 234
Query: 268 GVRSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPW 327
G R+ +TD +K+ TV G T LA G+Y+ + V Y+ LG+PSL+RE+S +
Sbjct: 235 GFRAFVTDWDKVTATVAGLTLLAVGVYSAKNATSVAGRYIEARLGKPSLVRETS--RISV 292
Query: 328 SGLLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPF 387
L + +V R S P +A++ +IL PSL+ R++ +A AT NTK +++ +
Sbjct: 293 LEALRHPI-QVSRRLVSR----PQDALEG---VILSPSLEARVRDIAIATRNTKKNKSLY 344
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKG 447
RN+L YGPPGTGKT+ A+++A SG+DYA+MTGGDVAP+G + VT +H++FDWA S++G
Sbjct: 345 RNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKVFDWASTSRRG 404
Query: 448 LLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITD 507
LLLF+DEADAFL +R + +SE R+ LNA L RTG S +LVLA+N+P D AI D
Sbjct: 405 LLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSNKFMLVLASNQPEQFDWAIND 464
Query: 508 RIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNV 567
RIDE++ F LP+ EER D LK KQ+ K+ D
Sbjct: 465 RIDEMVCFALPQREERERLVRMYF---------DKYVLKPA-TEGKQRLKVAQFDYGKKC 514
Query: 568 IQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIK 623
E A+ T G SGREIA+L + QA Y+ D VL + V+ V++H Q+++
Sbjct: 515 -SEVAQLTAGMSGREIAQLAVAWQAMAYSSEDGVLTEAMMDARVQDAVQQHQQKMQ 569
Score = 310 (114.2 bits), Expect = 8.2e-25, P = 8.2e-25
Identities = 91/275 (33%), Positives = 135/275 (49%)
Query: 51 AEQTADAQKSREPE-EPRGSGFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQTRLAE 109
AE D P + + S FDP SRHA+EA ++ + QEQT E
Sbjct: 28 AESGGDRGAGDRPSPKDKWSNFDPTGLERAAKAARELEHSRHAKEALNLAQMQEQTLQLE 87
Query: 110 LDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKA---QARAQGLRNEDELARKRLQTDH 166
+ YEA Q+ E+ R AEE R + ++ QARAQ +D+LAR+R +
Sbjct: 88 QQSKLKEYEAAVEQLKSEQIRVQAEERRKTLNEETRQHQARAQ---YQDKLARQRYEDQL 144
Query: 167 EAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAE 226
+ Q+ N E ++ QEES ++E RR+T E+ + L K E +RV+A EA
Sbjct: 145 KQQQLLNEENLRKQEESVQKQEAIRRATVER---EMELRHKN------EMLRVEA--EAR 193
Query: 227 GRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGA 286
RA + D R + + R+ L +I T + EG R+ +TD +K+ TV G
Sbjct: 194 ARAKADRENADIIREQIRLKAAEHRQTILESIRTAGTLFGEGFRAFVTDWDKVTATVAGL 253
Query: 287 TALAAGIYTTREGARVTWGYVNRILGQPSLIRESS 321
T LA G+Y+ + V Y+ LG+PSL+RE+S
Sbjct: 254 TLLAVGVYSAKNATSVAGRYIEARLGKPSLVRETS 288
>UNIPROTKB|Q3KRE0 [details] [associations]
symbol:Atad3 "ATPase family AAA domain-containing protein
3" species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
PROSITE:PS00674 SMART:SM00382 RGD:1305964 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0042645 GO:GO:0017111 CTD:55210
eggNOG:COG1223 GeneTree:ENSGT00560000077230 HOGENOM:HOG000231291
HOVERGEN:HBG058506 OrthoDB:EOG4ZCT46 InterPro:IPR021911
Pfam:PF12037 OMA:QRYDEQM EMBL:BC105762 IPI:IPI00365481
RefSeq:NP_001030094.1 UniGene:Rn.17450 ProteinModelPortal:Q3KRE0
IntAct:Q3KRE0 STRING:Q3KRE0 PRIDE:Q3KRE0 Ensembl:ENSRNOT00000045053
GeneID:298682 KEGG:rno:298682 InParanoid:Q3KRE0 NextBio:644164
ArrayExpress:Q3KRE0 Genevestigator:Q3KRE0 Uniprot:Q3KRE0
Length = 591
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 193/536 (36%), Positives = 299/536 (55%)
Query: 100 RKQEQTRLAELDVEKVHYEAIQSQ-VDVERQRKLAEEHRNLVQQKAQARAQGLRNEDELA 158
R+ E +R A+ E ++ +Q Q + +E+Q KL +E+ V+Q +++ +R + E
Sbjct: 62 RELEHSRHAK---EALNLAQMQEQTLQLEQQSKL-KEYEAAVEQ---LKSEQIRVQAEER 114
Query: 159 RKRLQTD---HEAQRRHNTELVKMQEESSIRKEQAR-----RSTEEQIQAQQ---RLTEK 207
RK L + H+A+ ++ +L + + E ++++Q R EE +Q Q+ R T +
Sbjct: 115 RKTLNEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAIRRATVE 174
Query: 208 ERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEE 267
E+ + ++ AEA RA + D R + + R+ L +I T + E
Sbjct: 175 REMELRHKNEMLRVEAEARARAKADRENADIIREQIRLKAAEHRQTILESIRTAGTLFGE 234
Query: 268 GVRSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPW 327
G R+ +TD +K+ TV G T LA G+Y+ + V Y+ LG+PSL+RE+S +
Sbjct: 235 GFRAFVTDWDKVTATVAGLTLLAVGVYSAKNATSVAGRYIEARLGKPSLVRETS--RISV 292
Query: 328 SGLLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPF 387
L + +V R S P +A++ +IL PSL+ R++ +A AT NTK +++ +
Sbjct: 293 LEALRHPI-QVSRRLVSR----PQDALEG---VILSPSLEARVRDIAIATRNTKKNKSLY 344
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKG 447
RN+L YGPPGTGKT+ A+++A SG+DYA+MTGGDVAP+G + VT +H++FDWA S++G
Sbjct: 345 RNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKVFDWASTSRRG 404
Query: 448 LLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITD 507
LLLF+DEADAFL +R + +SE R+ LNA L RTG S +LVLA+N+P D AI D
Sbjct: 405 LLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSNKFMLVLASNQPEQFDWAIND 464
Query: 508 RIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNV 567
RIDE++ F LP+ EER D LK KQ+ K+ D
Sbjct: 465 RIDEMVCFALPQREERERLVRMYF---------DKYVLKPA-TEGKQRLKVAQFDYGKKC 514
Query: 568 IQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIK 623
E A+ T G SGREIA+L + QA Y+ D VL + V+ V++H Q+++
Sbjct: 515 -SEVAQLTAGMSGREIAQLAVAWQAMAYSSEDGVLTEAMMDARVQDAVQQHQQKMQ 569
Score = 310 (114.2 bits), Expect = 8.2e-25, P = 8.2e-25
Identities = 91/275 (33%), Positives = 135/275 (49%)
Query: 51 AEQTADAQKSREPE-EPRGSGFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQTRLAE 109
AE D P + + S FDP SRHA+EA ++ + QEQT E
Sbjct: 28 AESGGDRGAGDRPSPKDKWSNFDPTGLERAAKAARELEHSRHAKEALNLAQMQEQTLQLE 87
Query: 110 LDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKA---QARAQGLRNEDELARKRLQTDH 166
+ YEA Q+ E+ R AEE R + ++ QARAQ +D+LAR+R +
Sbjct: 88 QQSKLKEYEAAVEQLKSEQIRVQAEERRKTLNEETRQHQARAQ---YQDKLARQRYEDQL 144
Query: 167 EAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAE 226
+ Q+ N E ++ QEES ++E RR+T E+ + L K E +RV+A EA
Sbjct: 145 KQQQLLNEENLRKQEESVQKQEAIRRATVER---EMELRHKN------EMLRVEA--EAR 193
Query: 227 GRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGA 286
RA + D R + + R+ L +I T + EG R+ +TD +K+ TV G
Sbjct: 194 ARAKADRENADIIREQIRLKAAEHRQTILESIRTAGTLFGEGFRAFVTDWDKVTATVAGL 253
Query: 287 TALAAGIYTTREGARVTWGYVNRILGQPSLIRESS 321
T LA G+Y+ + V Y+ LG+PSL+RE+S
Sbjct: 254 TLLAVGVYSAKNATSVAGRYIEARLGKPSLVRETS 288
>UNIPROTKB|Q9NVI7 [details] [associations]
symbol:ATAD3A "ATPase family AAA domain-containing protein
3A" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0016049 "cell growth"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0043066 GO:GO:0005743 GO:GO:0016049
GO:GO:0042645 EMBL:CH471183 GO:GO:0017111 CTD:55210 eggNOG:COG1223
HOGENOM:HOG000231291 HOVERGEN:HBG058506 OMA:MMDTRVQ
InterPro:IPR021911 Pfam:PF12037 EMBL:GU189416 EMBL:AK001571
EMBL:AK056099 EMBL:AK091144 EMBL:AL645728 EMBL:BC007803
EMBL:BC011814 EMBL:BC014101 EMBL:BC033109 EMBL:BC063607
IPI:IPI00295992 IPI:IPI00643435 RefSeq:NP_001164006.1
RefSeq:NP_001164007.1 RefSeq:NP_060658.3 UniGene:Hs.23413
ProteinModelPortal:Q9NVI7 SMR:Q9NVI7 DIP:DIP-33194N IntAct:Q9NVI7
MINT:MINT-1148423 STRING:Q9NVI7 PhosphoSite:Q9NVI7 DMDM:84028405
PaxDb:Q9NVI7 PRIDE:Q9NVI7 Ensembl:ENST00000378755
Ensembl:ENST00000378756 Ensembl:ENST00000536055 GeneID:55210
KEGG:hsa:55210 UCSC:uc001afz.2 GeneCards:GC01P001439
HGNC:HGNC:25567 MIM:612316 neXtProt:NX_Q9NVI7 PharmGKB:PA134872099
InParanoid:Q9NVI7 PhylomeDB:Q9NVI7 ChiTaRS:ATAD3A GenomeRNAi:55210
NextBio:59150 ArrayExpress:Q9NVI7 Bgee:Q9NVI7 CleanEx:HS_ATAD3A
Genevestigator:Q9NVI7 GermOnline:ENSG00000197785 Uniprot:Q9NVI7
Length = 634
Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
Identities = 193/526 (36%), Positives = 287/526 (54%)
Query: 113 EKVHYEAIQSQVDVERQRKLAEEHRNLVQQKA-QARAQGLRNEDELARKRLQTDHEAQRR 171
E++ A QV L E + Q K+ Q RAQ L+ + Q H+A+ +
Sbjct: 122 ERLSGSASPEQVPAGECCALQEYEAAVEQLKSEQIRAQAEERRKTLSEETRQ--HQARAQ 179
Query: 172 HNTELVKMQEESSIRKEQAR-----RSTEEQIQAQQ---RLTEKERAEIERETIRVKAMA 223
+ +L + + E ++++Q R EE +Q Q+ R T + E+ + ++ A
Sbjct: 180 YQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRHKNEMLRVEA 239
Query: 224 EAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTV 283
EA RA + D R + + R+ L +I T + EG R+ +TD +K+ TV
Sbjct: 240 EARARAKAERENADIIREQIRLKAAEHRQTVLESIRTAGTLFGEGFRAFVTDWDKVTATV 299
Query: 284 GGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPWSGLLSQAMNKVIRNKT 343
G T LA G+Y+ + V ++ LG+PSL+RE+S + L + +V R
Sbjct: 300 AGLTLLAVGVYSAKNATLVAGRFIEARLGKPSLVRETS--RITVLEALRHPI-QVSRRLL 356
Query: 344 SAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMV 403
S P +A++ ++L PSL+ R++ +A AT NTK +++ +RN+L YGPPGTGKT+
Sbjct: 357 SR----PQDALEG---VVLSPSLEARVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLF 409
Query: 404 AREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERN 463
A+++A SG+DYA+MTGGDVAP+G + VT +H++FDWA S++GLLLF+DEADAFL +R
Sbjct: 410 AKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFVDEADAFLRKRA 469
Query: 464 SIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPREEER 523
+ +SE R+ LNA L+RTG S +LVLA+N+P D AI DRI+E++ F LP +EER
Sbjct: 470 TEKISEDLRATLNAFLYRTGQHSNKFMLVLASNQPEQFDWAINDRINEMVHFDLPGQEER 529
Query: 524 FXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREI 583
D LK KQ+ K+ D E AR TEG SGREI
Sbjct: 530 ERLVRMYF---------DKYVLKPA-TEGKQRLKLAQFDYGRKC-SEVARLTEGMSGREI 578
Query: 584 AKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIK-LAAEG 628
A+L S QA YA D VL + V+ V++H Q++ L AEG
Sbjct: 579 AQLAVSWQATAYASEDGVLTEAMMDTRVQDAVQQHQQKMCWLKAEG 624
>FB|FBgn0040237 [details] [associations]
symbol:bor "belphegor" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0017111
GeneTree:ENSGT00560000077230 InterPro:IPR021911 Pfam:PF12037
FlyBase:FBgn0040237 EMBL:AF227209 EMBL:AF227210
RefSeq:NP_001247135.1 RefSeq:NP_001247136.1 RefSeq:NP_524996.1
UniGene:Dm.1727 SMR:Q9VEX6 STRING:Q9VEX6 EnsemblMetazoa:FBtr0083276
EnsemblMetazoa:FBtr0305998 EnsemblMetazoa:FBtr0305999 GeneID:53565
KEGG:dme:Dmel_CG6815 UCSC:CG6815-RA CTD:53565 InParanoid:Q9VEX6
OMA:QKMAWLS GenomeRNAi:53565 NextBio:841412 Uniprot:Q9VEX6
Length = 604
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 193/549 (35%), Positives = 315/549 (57%)
Query: 86 FNSSRHAREAFDIMRKQEQTRLAE--LDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQK 143
F+SS R A D + E+++ A L++ K+ Q++ + + + A + V+QK
Sbjct: 56 FDSSALERAA-DAAKTLERSKHAREALELSKMQEATRQTEYNTKVKEYEAHIEQAKVEQK 114
Query: 144 A---QARAQGLRNEDELARKRLQ-TDHEAQRRHNTELVKMQ--EESSIRKEQARRSTEEQ 197
+ R + L E + ++R Q D +++R+ +L++ Q +E ++RK++ S + Q
Sbjct: 115 RIDHEERRKTLIEETKQQQQRAQYQDQLSRKRYEDQLLQQQRVQEENLRKQE--ESVQRQ 172
Query: 198 IQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERIN----GEREK 253
+A +R T + E+ +E R+K + E E RA +A++ + NR + +E+I R
Sbjct: 173 -EAMRRQTIEHEIEM-KEKNRLKLL-EHELRA-KARVDRE-NRDINLEKIRLKAQEHRTT 227
Query: 254 WLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQ 313
L I T + I G ++LTD +K++ GG + LA G+YT + V YV +G+
Sbjct: 228 VLEGIKTAGTVIGAGAEAMLTDWDKVLTAAGGLSLLALGVYTAKGATGVVSRYVEARIGK 287
Query: 314 PSLIRESSIGKFPWSGLLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHL 373
P+L+ E+S +F + L ++ + R + A P +A++ ++L+P L+ R++ +
Sbjct: 288 PTLVGETS--RFAFLDALKNPLHYLKRLR-----AKPTDALQG---VVLNPKLEERLRDI 337
Query: 374 AKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTK 433
A AT NT+I++ +RN+L +GPPGTGKTM A+++A SG+D+A+MTGGDVAP+G + VT
Sbjct: 338 AIATKNTRINKGMYRNVLMHGPPGTGKTMFAKKLAEHSGMDFAIMTGGDVAPMGKEGVTA 397
Query: 434 IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVL 493
IH++FDW+ S++GLLLF+DEADAFL +R+S +SE R+ALNA L+RT +Q+ +LVL
Sbjct: 398 IHKVFDWSHTSRRGLLLFVDEADAFLRKRSSEKISEDLRAALNAFLYRTSEQNPKFMLVL 457
Query: 494 ATNRPGDLDSAITDRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKK 553
A+N P D AI DR+DE++EF LP EER D L+ K
Sbjct: 458 ASNTPEQFDYAINDRLDEMVEFTLPGLEERERLLRLYF---------DKYVLQPAAAGAK 508
Query: 554 QQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEY 613
+ K+ D + AA EG SGREI+KL S QAAVYA D +L ++ +
Sbjct: 509 RF-KLDTFDYGKTCSKMAAL-CEGMSGREISKLGVSWQAAVYASEDGLLTEKMVLDRCYS 566
Query: 614 KVEEHHQRI 622
++H Q++
Sbjct: 567 AAQQHKQKM 575
Score = 310 (114.2 bits), Expect = 8.8e-25, P = 8.8e-25
Identities = 91/308 (29%), Positives = 146/308 (47%)
Query: 47 GNDEAEQTADAQKSR-EPEEPRGSGFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQT 105
G E++ D+Q SR E + FD S+HAREA ++ + QE T
Sbjct: 31 GRTAGEKSGDSQLSRAERKAMEAYRFDSSALERAADAAKTLERSKHAREALELSKMQEAT 90
Query: 106 RLAELDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTD 165
R E + + YEA Q VE++R EE R + ++ + + Q + +D+L+RKR +
Sbjct: 91 RQTEYNTKVKEYEAHIEQAKVEQKRIDHEERRKTLIEETKQQQQRAQYQDQLSRKRYEDQ 150
Query: 166 HEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEA 225
Q+R E ++ QEES R+E RR T I+ + + EK R ++ +R KA +
Sbjct: 151 LLQQQRVQEENLRKQEESVQRQEAMRRQT---IEHEIEMKEKNRLKLLEHELRAKARVDR 207
Query: 226 EGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGG 285
E R D N + + R L I T + I G ++LTD +K++ GG
Sbjct: 208 ENR--------DINLEKIRLKAQEHRTTVLEGIKTAGTVIGAGAEAMLTDWDKVLTAAGG 259
Query: 286 ATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPWSGLLSQAMN--KVIRNKT 343
+ LA G+YT + V YV +G+P+L+ E+S +F + L ++ K +R K
Sbjct: 260 LSLLALGVYTAKGATGVVSRYVEARIGKPTLVGETS--RFAFLDALKNPLHYLKRLRAKP 317
Query: 344 SAGTAGPV 351
+ G V
Sbjct: 318 TDALQGVV 325
>UNIPROTKB|Q5T2N8 [details] [associations]
symbol:ATAD3C "ATPase family AAA domain-containing protein
3C" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 eggNOG:COG1223 HOGENOM:HOG000231291
HOVERGEN:HBG058506 OrthoDB:EOG4ZCT46 InterPro:IPR021911
Pfam:PF12037 EMBL:AL157945 EMBL:AK091918 EMBL:AK094502
EMBL:AL391244 EMBL:BC101211 EMBL:BC101212 IPI:IPI00513768
RefSeq:NP_001034300.2 UniGene:Hs.724767 ProteinModelPortal:Q5T2N8
SMR:Q5T2N8 IntAct:Q5T2N8 PhosphoSite:Q5T2N8 DMDM:162416279
PaxDb:Q5T2N8 PRIDE:Q5T2N8 Ensembl:ENST00000378785 GeneID:219293
KEGG:hsa:219293 UCSC:uc001aft.2 CTD:219293 GeneCards:GC01P001376
H-InvDB:HIX0023514 HGNC:HGNC:32151 neXtProt:NX_Q5T2N8
PharmGKB:PA134903201 OMA:WAINDID GenomeRNAi:219293 NextBio:90570
Bgee:Q5T2N8 Genevestigator:Q5T2N8 Uniprot:Q5T2N8
Length = 411
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 152/427 (35%), Positives = 236/427 (55%)
Query: 210 AEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGV 269
A+++ +T+++ E + + + + ED ++ E + + +L +I + EG
Sbjct: 9 AQMQEQTLQL----EQQSKLKQL-VNEDLRKQE--ESVQKHHQTFLESIRAAGTLFGEGF 61
Query: 270 RSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPWSG 329
R+ +TDR+K+ TV G T LA G+Y+ + VT Y+ LG+PSL+RE+S +
Sbjct: 62 RAFVTDRDKVTATVAGLTLLAVGVYSAKNATAVTGRYIEARLGKPSLVRETS--RITVLE 119
Query: 330 LLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRN 389
L + +V R S P + ++ ++L PSL+ R++ +A T N K ++ +R+
Sbjct: 120 ALRHPIQQVSRRLLSR----PQDVLEG---VVLSPSLEARVRDIAIMTRNIKKNRGLYRH 172
Query: 390 MLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGLL 449
+L YGPPGTGKT+ A+++A SG+DYA+MTGGDVAP+G + VT +H++FDWA S++GLL
Sbjct: 173 ILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLL 232
Query: 450 LFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRI 509
LF+DEADAFL +R + +SE R+ LNA L+RTG S +L+LA+ P D AI I
Sbjct: 233 LFVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLILASCHPEQFDWAINACI 292
Query: 510 DEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKDLSDNVIQ 569
D ++ F LP +EER + K++ K+ D +
Sbjct: 293 DVMVHFDLPGQEERARLVRMYLNEYVLKPATEG----------KRRLKLAQFDYGRKCL- 341
Query: 570 EAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIK-LAAEG 628
E AR TEG S R+IA+L S QA YA D VL + V+ V++H Q ++ L E
Sbjct: 342 EIARLTEGMSCRKIAQLAVSWQATAYASKDGVLTEAMMDACVQDFVQQHQQMMRWLKGER 401
Query: 629 SQPTKNQ 635
P Q
Sbjct: 402 PGPEDEQ 408
>UNIPROTKB|Q5SV16 [details] [associations]
symbol:ATAD3A "ATPase family AAA domain-containing protein
3A" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524
HOGENOM:HOG000231291 EMBL:AL645728 HGNC:HGNC:25567 ChiTaRS:ATAD3A
UniGene:Hs.724767 Ensembl:ENST00000400830 Uniprot:Q5SV16
Length = 201
Score = 254 (94.5 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 47/83 (56%), Positives = 65/83 (78%)
Query: 406 EIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSI 465
++A SG+DYA+MTGGDVAP+G + VT +H++FDWA S++GLLLF+DEADAFL +R +
Sbjct: 1 KLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFVDEADAFLRKRATE 60
Query: 466 HMSEAQRSALNALLFRTGDQSRD 488
+SE R+ LNA L+RTG S +
Sbjct: 61 KISEDLRATLNAFLYRTGQHSNN 83
Score = 123 (48.4 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 41/102 (40%), Positives = 51/102 (50%)
Query: 490 VLVLATNRPGDLDSAITDRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGH 549
+LVLA+N+P D AI DRI+E++ F LP +EER D LK
Sbjct: 111 MLVLASNQPEQFDWAINDRINEMVHFDLPGQEERERLVRMYF---------DKYVLKPA- 160
Query: 550 LFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMASVQ 591
KQ+ K+ D E AR TEG SGREIA+L S Q
Sbjct: 161 TEGKQRLKLAQFDYGRKC-SEVARLTEGMSGREIAQLAVSWQ 201
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 204 (76.9 bits), Expect = 7.4e-16, Sum P(3) = 7.4e-16
Identities = 52/150 (34%), Positives = 80/150 (53%)
Query: 381 KIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFD 439
K+ P + +L YGPPGTGKT++A+ +A ++ + + G + V + + + +IF
Sbjct: 198 KVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFK 257
Query: 440 WAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTGDQSR-DIVLVLAT 495
AK+ K ++FIDE DA +R E QR+ + L G +R D+ ++ AT
Sbjct: 258 LAKE-KAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGAT 316
Query: 496 NRPGDLDSAIT--DRIDEVIEFPLPREEER 523
NRP LD AI R D +IE P P E+ R
Sbjct: 317 NRPDILDPAILRPGRFDRIIEVPAPDEKGR 346
Score = 57 (25.1 bits), Expect = 7.4e-16, Sum P(3) = 7.4e-16
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 562 DLSDNV-IQEAARKTEGFSGREIAKLM--ASVQAAVYARPDCVLDSQLFREVVEYKVEEH 618
+L+++V ++E A+ TEG G E+ + A + A R +D FR+ VE +E+
Sbjct: 358 NLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDD--FRKAVEKIMEKK 415
Query: 619 HQRIK 623
++K
Sbjct: 416 KVKVK 420
Score = 47 (21.6 bits), Expect = 7.4e-16, Sum P(3) = 7.4e-16
Identities = 16/77 (20%), Positives = 38/77 (49%)
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQI---QAQQRLT--EKER 209
+E L+ + +A E ++ + S+++ + + +E+ + + R+ E E+
Sbjct: 4 EEFISTELKKEKKAFTEEFKEEKEINDNSNLKNDLLKEELQEKARIAELESRILKLELEK 63
Query: 210 AEIERETIRVKAMAEAE 226
E+ERE +++ M E E
Sbjct: 64 KELERENLQL--MKENE 78
Score = 46 (21.3 bits), Expect = 9.3e-16, Sum P(3) = 9.3e-16
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 109 ELDVEKVHY-EAIQSQVDVERQRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTDHE 167
EL EK + E + + ++ L + L++++ Q +A+ E + + L+ + +
Sbjct: 10 ELKKEKKAFTEEFKEEKEINDNSNLKND---LLKEELQEKARIAELESRILK--LELEKK 64
Query: 168 AQRRHNTELVKMQEESSIRKEQAR 191
R N +L+K E +R+E R
Sbjct: 65 ELERENLQLMK--ENEILRRELDR 86
Score = 41 (19.5 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 10/40 (25%), Positives = 24/40 (60%)
Query: 97 DIMRK--QEQTRLAELDVEKVHYEAIQSQVDVERQRKLAE 134
D++++ QE+ R+AEL+ + E + +++ E + + E
Sbjct: 37 DLLKEELQEKARIAELESRILKLELEKKELERENLQLMKE 76
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 219 (82.2 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 60/145 (41%), Positives = 80/145 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPGTGKT+ AR IA ++ + + G + V + + E+F AK S
Sbjct: 195 PPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAK-S 253
Query: 445 KKGLLLFIDEADAFLCERN--SIHMS-EAQRSALNALLFRTGDQSR-DIVLVLATNRPGD 500
KK +LFIDE DA R S H E QR+ L + G +R +I +++ATNRP
Sbjct: 254 KKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDT 313
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LDSA+ RID IEF LP E R
Sbjct: 314 LDSALVRPGRIDRRIEFSLPDLEGR 338
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 219 (82.2 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 60/145 (41%), Positives = 80/145 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPGTGKT+ AR IA ++ + + G + V + + E+F AK S
Sbjct: 195 PPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAK-S 253
Query: 445 KKGLLLFIDEADAFLCERN--SIHMS-EAQRSALNALLFRTGDQSR-DIVLVLATNRPGD 500
KK +LFIDE DA R S H E QR+ L + G +R +I +++ATNRP
Sbjct: 254 KKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDT 313
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LDSA+ RID IEF LP E R
Sbjct: 314 LDSALVRPGRIDRRIEFSLPDLEGR 338
>POMBASE|SPAC2G11.06 [details] [associations]
symbol:vps4 "AAA family ATPase Vps4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISS] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC2G11.06 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887 GO:GO:0010008
Pfam:PF04212 eggNOG:COG0464 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043328 SMART:SM00745 GO:GO:0045053 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL EMBL:L33456 PIR:T38572 RefSeq:NP_593086.1
ProteinModelPortal:Q09803 SMR:Q09803 STRING:Q09803
EnsemblFungi:SPAC2G11.06.1 GeneID:2542054 KEGG:spo:SPAC2G11.06
OrthoDB:EOG4V1B8K NextBio:20803129 Uniprot:Q09803
Length = 432
Score = 193 (73.0 bits), Expect = 7.5e-15, Sum P(4) = 7.5e-15
Identities = 50/142 (35%), Positives = 78/142 (54%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P+ +L YGPPGTGK+ +A+ +A ++G + ++ D V+ ++ + ++F+ A++
Sbjct: 161 PWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQ 220
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDI--VLVL-ATNRPGDL 501
K ++ FIDE D+ LC S SE+ R L + +D VLVL ATN P L
Sbjct: 221 KPSII-FIDEIDS-LCGSRSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTL 278
Query: 502 DSAITDRIDEVIEFPLPREEER 523
DSAI R ++ I PLP R
Sbjct: 279 DSAIRRRFEKRIYIPLPNAHAR 300
Score = 55 (24.4 bits), Expect = 7.5e-15, Sum P(4) = 7.5e-15
Identities = 38/128 (29%), Positives = 54/128 (42%)
Query: 208 ERAEIERETIRVKAMAEAEGRAHEAK--LTEDHNRRMLIERI-NGEREKWLA-AINTTFS 263
E+ E +E IR K + E RA + K L E +N+ R+ NG E + N
Sbjct: 47 EKNEKSKEIIRSKVI-EYLDRAEKLKVYLQEKNNQISSKSRVSNGNVEGSNSPTANEALD 105
Query: 264 HIEEGVRSLLTDRNKLVMTVGGATALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIG 323
+ +RS LT LV AG+ +E + T V + P L S G
Sbjct: 106 SDAKKLRSALTSAI-LVEKPNVRWDDIAGLENAKEALKET---VLLPIKLPQLF---SHG 158
Query: 324 KFPWSGLL 331
+ PWSG+L
Sbjct: 159 RKPWSGIL 166
Score = 49 (22.3 bits), Expect = 7.5e-15, Sum P(4) = 7.5e-15
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 550 LFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFRE 609
+F+ KI +L+ +E A+ T+G+SG +I+ + V+ A+ + + F+E
Sbjct: 303 MFELNVGKIP-SELTSQDFKELAKMTDGYSGSDISIV---VRDAIMEPVRRIHTATHFKE 358
Query: 610 VVEYK 614
V + K
Sbjct: 359 VYDNK 363
Score = 37 (18.1 bits), Expect = 7.5e-15, Sum P(4) = 7.5e-15
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 48 NDEAEQTADAQK 59
ND AEQ DA K
Sbjct: 20 NDNAEQYPDAYK 31
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 196 (74.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 52/147 (35%), Positives = 79/147 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPG GKTM+A+ +A + + + G + LG + + ++F AK+
Sbjct: 193 PPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 251
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G DQ+ ++ +++ATNR
Sbjct: 252 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRAD 310
Query: 500 DLDSAIT--DRIDEVIEFPLP-REEER 523
LD A+ R+D IEFPLP R ++R
Sbjct: 311 TLDPALLRPGRLDRKIEFPLPDRRQKR 337
Score = 62 (26.9 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 94 EAFDIMRKQEQTRLAELDVEK--VHYEAIQSQVD-VERQRK-LAEEHRNLVQQKAQARAQ 149
E D+ K + L ELD+E V Y+ +Q ++ +E Q + + +E RNL ++ A+ +
Sbjct: 14 ELSDLKLKDAHSSLDELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQEE 73
Score = 53 (23.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 18/79 (22%), Positives = 39/79 (49%)
Query: 154 EDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIE 213
+DEL+ +L+ H + + E + ++ + + + EE I+ +QR +KE +
Sbjct: 12 KDELSDLKLKDAHSSLDELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQ 71
Query: 214 RETIRVKAMAEAEGRAHEA 232
E R++++ G+ EA
Sbjct: 72 EEVKRIQSVPLVIGQFLEA 90
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 190 (71.9 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 51/137 (37%), Positives = 80/137 (58%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGG--DVAPLGAQAVTKIHEIFDWAKKSK 445
+ +L GPPGTGKT++AR A ++G+D+ M+G D +G A +I ++F A+ S+
Sbjct: 315 KGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGA-KRIRDLFAQAR-SR 372
Query: 446 KGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTG--DQSRDIVLVLATNRPGDLDS 503
++FIDE DA +RN + A+++ LN LL Q+ I+++ ATN P LD
Sbjct: 373 APAIIFIDELDAIGGKRNPKDQAYAKQT-LNQLLVELDGFSQTSGIIIIGATNFPEALDK 431
Query: 504 AIT--DRIDEVIEFPLP 518
A+T R D+V+ LP
Sbjct: 432 ALTRPGRFDKVVNVDLP 448
Score = 76 (31.8 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 550 LFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYA 596
+ K +KIT+ D D I AR T G SG E+A L+ QAAVYA
Sbjct: 456 ILKHHMKKITLADNVDPTI--IARGTPGLSGAELANLVN--QAAVYA 498
Score = 38 (18.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 560 IKDLSDNVIQEAARKTEGFSGREIAK 585
I+D++DN + E + +E + R + K
Sbjct: 655 IRDIADNEVIELLKDSEERARRLLTK 680
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 215 (80.7 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 60/183 (32%), Positives = 98/183 (53%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L ++Q ++H K K +P + +LFYGPPG GKT++A+ IA
Sbjct: 484 GGLENVKRE----LQETVQYPVEHPEKFE---KFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCER-NSI- 465
+ ++ + G ++ + ++ + EIFD A++S +LF DE D+ +R NS+
Sbjct: 537 NECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP-CVLFFDELDSIATQRGNSVG 595
Query: 466 HMSEAQRSALNALLFRT-GDQSRDIVLVL-ATNRPGDLDSAIT--DRIDEVIEFPLPREE 521
A LN LL G ++ V ++ ATNRP +D A+ R+D++I PLP EE
Sbjct: 596 DAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEE 655
Query: 522 ERF 524
R+
Sbjct: 656 SRY 658
Score = 198 (74.8 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 47/140 (33%), Positives = 82/140 (58%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPG+GKT++AR +A ++G + + G ++ + L ++ + + + F+ A+K+
Sbjct: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVL-ATNRPGDLD 502
++ FIDE D+ +R H E +R ++ LL G +SR V+V+ ATNRP +D
Sbjct: 301 APSII-FIDEIDSIAPKREKTH-GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSID 358
Query: 503 SAIT--DRIDEVIEFPLPRE 520
A+ R D I+ +P E
Sbjct: 359 PALRRFGRFDREIDIGVPDE 378
Score = 48 (22.0 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 550 LFKKQQQKITI-KDLSDNVIQEAARKTEGFSGREIAKL-MASVQAAVYARPDCVLDSQLF 607
+FK +K + KD+ ++ A+ T+GFSG +I ++ S + A+ + ++ +
Sbjct: 660 IFKSCLRKSPVAKDVD---LRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERK 716
Query: 608 REVVEYKVEEHHQRI 622
R +EE + I
Sbjct: 717 RAESPEAMEEDEEEI 731
Score = 44 (20.5 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DE+ A KR +T E +RR ++L+ +
Sbjct: 277 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLM 336
Query: 181 E 181
+
Sbjct: 337 D 337
Score = 39 (18.8 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 15/74 (20%), Positives = 36/74 (48%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLM--ASVQAAVYARPDCV-LDSQLFREVVEYKVEEH 618
L+++V ++ ++ T G+ G ++A L A++Q + + D + LD + + +
Sbjct: 394 LAEDVDLERVSKDTHGYVGADLAALCTEAALQC-IREKMDVIDLDDEEIDAEILNSMAVS 452
Query: 619 HQRIKLAAEGSQPT 632
+ + A S P+
Sbjct: 453 NDHFQTALGNSNPS 466
Score = 37 (18.1 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 107 LAELDVEKVHYEAIQSQVDVERQRKLAEEH 136
+ L+V ++H + ++ DV+ +R + H
Sbjct: 379 IGRLEVLRIHTKNMKLAEDVDLERVSKDTH 408
>ZFIN|ZDB-GENE-030616-593 [details] [associations]
symbol:atad1a "ATPase family, AAA domain containing
1a" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-030616-593 GO:GO:0005886 GO:GO:0005524 GO:GO:0005777
GO:GO:0030054 GO:GO:0045211 GO:GO:0006200 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000225141 HOVERGEN:HBG057074
GeneTree:ENSGT00550000074823 EMBL:AL772163 EMBL:BC081379
IPI:IPI00499109 IPI:IPI00508202 RefSeq:NP_001004640.1
UniGene:Dr.104656 ProteinModelPortal:Q7ZZ25 STRING:Q7ZZ25
Ensembl:ENSDART00000035859 GeneID:368672 KEGG:dre:368672 CTD:368672
InParanoid:Q7ZZ25 OrthoDB:EOG4VHK6P NextBio:20813106 Bgee:Q7ZZ25
Uniprot:Q7ZZ25
Length = 380
Score = 185 (70.2 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 58/181 (32%), Positives = 94/181 (51%)
Query: 348 AGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREI 407
AG E I D ++ P Q+R HL + +K+ Q P + +L YGPPG GKT++A+
Sbjct: 97 AGLDEIISEMQDTVILP-FQKR--HLF---SGSKLLQPP-KGVLLYGPPGCGKTLIAKAT 149
Query: 408 ARKSGLDYAMMTGGDVAPLGAQAVTKIHE-IFDWAKKSKKGLLLFIDEADAFLCERNSI- 465
A+ SG + + + K+ +F A K + ++F+DE D+FL R+S+
Sbjct: 150 AKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQP-CIIFLDEIDSFLRNRSSMD 208
Query: 466 HMSEAQRSALNALLFR---TGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPREEE 522
H + A A L+ TG+ S+ ++++ ATNRP D+D+AI R+ LP +
Sbjct: 209 HEATAMMKAQFMSLWDGLDTGENSQ-VMVMGATNRPQDVDAAILRRMPTAFHVGLPNAAQ 267
Query: 523 R 523
R
Sbjct: 268 R 268
Score = 67 (28.6 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 16/63 (25%), Positives = 38/63 (60%)
Query: 561 KDLSDNV-IQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHH 619
++LS+ + ++E A ++EG+SG ++ +L AA+Y D V Q+ + +++++E
Sbjct: 279 ENLSNAINLKEIASQSEGYSGSDLKELCRD--AAMYRVRDYVRKQQMKQIAQQFQLDEEE 336
Query: 620 QRI 622
+ +
Sbjct: 337 EHV 339
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 214 (80.4 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 114/424 (26%), Positives = 178/424 (41%)
Query: 154 EDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIE 213
E + AR+RL +Q ++ T + M + Q + EE + Q+ L I
Sbjct: 3 EKKNARERLDL---SQLQNTTTVSTMVTLEDLENNQQQ---EENVIDQEILNSSTSDIIN 56
Query: 214 RETIR---VKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVR 270
R + +K M R+ +L +H + +++ERI +EK N ++ V
Sbjct: 57 RTKLLDNDIKVM-----RSESQRL--NHEKTVMLERIKDNQEK--INNNKQLPYLVGNVV 107
Query: 271 SLLT-DRNKLVMTVGG---ATALAAGIYTT-REGARVTWGYVNRI-LGQPSLIRESS-IG 323
LL D +K G A AG + R T ++ I L PS ++ + IG
Sbjct: 108 ELLNLDADKEASEQGANIDIDAARAGKSAVIKTSTRQTI-FLPMIGLVDPSKLKPNDLIG 166
Query: 324 KFPWSGLLSQAMNKVIRNKTSAGTAG--PVEAIKNNG--DIILHPSLQRRIQHLAKATAN 379
S L+ + ++ A P E + G D + ++ + + +A
Sbjct: 167 VNKDSYLVLDTLPSEYDSRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKF 226
Query: 380 TKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTK-IHEIF 438
+ P + L YGPPGTGKT++AR A +SG + + + + K + + F
Sbjct: 227 KNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAF 286
Query: 439 DWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTGDQSRDIVLVLA- 494
AK+ K ++FIDE DA +R S E QR+ L L G S D V VLA
Sbjct: 287 ALAKE-KAPTIIFIDELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGFGSDDRVKVLAA 345
Query: 495 TNRPGDLDSAI--TDRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFK 552
TNR LD A+ + R+D IEFPLP EE R C D++S+ W L +
Sbjct: 346 TNRVDTLDPALLRSGRLDRKIEFPLPSEEARESVLKIHARKLHC----DNNSVNWRELAR 401
Query: 553 KQQQ 556
+
Sbjct: 402 STDE 405
Score = 38 (18.4 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 569 QEAARKTEGFSGREIAKLMASVQAAVYA 596
+E AR T+ F+G ++ + +V+A + A
Sbjct: 397 RELARSTDEFNGAQLKAV--TVEAGMIA 422
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 210 (79.0 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 60/182 (32%), Positives = 97/182 (53%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L ++Q ++H K K +P + +LFYGPPG GKT++A+ IA
Sbjct: 483 GGLENVKRE----LQETVQYPVEHPEKFE---KFGMSPSKGVLFYGPPGCGKTLLAKAIA 535
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCER-NSI- 465
+ ++ + G ++ + ++ + EIFD A++S +LF DE D+ +R NS
Sbjct: 536 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP-CVLFFDELDSIATQRGNSAG 594
Query: 466 HMSEAQRSALNALLFRT-GDQSRDIVLVL-ATNRPGDLDSAIT--DRIDEVIEFPLPREE 521
A LN LL G ++ V ++ ATNRP +DSA+ R+D++I PLP E+
Sbjct: 595 DAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDED 654
Query: 522 ER 523
R
Sbjct: 655 SR 656
Score = 191 (72.3 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 46/140 (32%), Positives = 82/140 (58%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPG+GKT++AR +A ++G + + G ++ + L ++ + + + F+ A+K+
Sbjct: 240 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 299
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVL-ATNRPGDLD 502
++ FIDE D+ +R + E +R ++ LL G +SR V+V+ ATNRP +D
Sbjct: 300 APSII-FIDEIDSIAPKREKTN-GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSID 357
Query: 503 SAIT--DRIDEVIEFPLPRE 520
A+ R D I+ +P E
Sbjct: 358 PALRRFGRFDREIDIGVPDE 377
Score = 46 (21.3 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 549 HLFKKQQQKITI-KDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYA 596
++FK +K + KD+ + A+ T+GFSG +I ++ +A YA
Sbjct: 658 NIFKACLRKSPVAKDVD---VTALAKYTQGFSGADITEICQ--RACKYA 701
Score = 46 (21.3 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DE+ A KR +T+ E +RR ++L+ +
Sbjct: 276 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLM 335
Query: 181 E 181
+
Sbjct: 336 D 336
>ASPGD|ASPL0000002098 [details] [associations]
symbol:AN6263 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AACD01000107 EMBL:BN001301 eggNOG:COG0464
GO:GO:0017111 RefSeq:XP_663867.1 ProteinModelPortal:Q5AZL7
EnsemblFungi:CADANIAT00006727 GeneID:2871165 KEGG:ani:AN6263.2
HOGENOM:HOG000165049 OMA:RTSHREL OrthoDB:EOG4936S0 Uniprot:Q5AZL7
Length = 956
Score = 220 (82.5 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 51/137 (37%), Positives = 76/137 (55%)
Query: 390 MLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGA-QAVTKIHEIFDWAKKSKKGL 448
+L YGPPGTGKT++A+ +AR+SG ++G +V + + + IF AKK
Sbjct: 687 LLLYGPPGTGKTLLAKAVARESGATVLEVSGSEVYDMYVGEGEKNVKAIFTLAKKLNP-C 745
Query: 449 LLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDI--VLVLATNRPGDLDSAIT 506
++FIDEADA C R + R +N L R D D+ +++ATNRP DLD A+
Sbjct: 746 VVFIDEADAIFCSRTGASSRTSHRELINQFL-REWDGMNDLSTFIMVATNRPFDLDDAVL 804
Query: 507 DRIDEVIEFPLPREEER 523
R+ + LP E++R
Sbjct: 805 RRLPRRLLVDLPTEQDR 821
Score = 45 (20.9 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 557 KITIKD--LSDNV-IQEAARKTEGFSGREIAKL-MASVQAAV 594
KI +KD L +V + E AR+T +SG ++ L +A+ A V
Sbjct: 826 KIHLKDEALDASVDLAELARRTPLYSGSDLKNLCVAAALACV 867
Score = 39 (18.8 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 188 EQARRSTEEQIQAQQRLTEKERA-EIERETIRVKAMAEAEGRAHEAKL 234
E RR+ + + Q T K R+ E E R+ + +HE KL
Sbjct: 586 EMLRRTERVRDEWLQERTPKARSSETENNRERLISSLRKTCNSHEKKL 633
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 177 (67.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 48/143 (33%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKKSK 445
+ +L YGPPGTGKT++AR +A + + ++G ++ +G + + E+F A++
Sbjct: 214 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG-EGSRMVRELFVMAREHA 272
Query: 446 KGLLLFIDEADAFLCER-NSIHM-SEAQRSALNALLFRTGDQS-RDIVLVLATNRPGDLD 502
++ F+DE D+ +R H SE QR+ + L G +S ++I +++ TNR LD
Sbjct: 273 PSII-FMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILD 331
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
A+ RID IEFP P E R
Sbjct: 332 EALLRPGRIDRKIEFPNPNVEAR 354
Score = 76 (31.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 30/143 (20%), Positives = 68/143 (47%)
Query: 148 AQGLRNEDELARKRLQTDHEAQRRHNTE-LVKMQEESSIRKEQARRSTEEQIQAQQRLTE 206
++G++NE ++ K ++ ++ N+ L + Q +S I++ + E + ++L
Sbjct: 14 SEGIKNE--ISEKNMENNNNNDNNKNSSALNEEQVQSGIKRYYELKIEEYESIINKKLQN 71
Query: 207 KERAEIERETI--RVKAMAEA-----EGRAHEAKLTEDHNRRMLIERINGEREKWLAAI- 258
K+R E +R + RV+ + + E ++ ++ + + ++ +IN E K++ I
Sbjct: 72 KKRLEAQRNELNARVRELCDEIQYLLEAASYVGEIVKPMGKNKVLVKINPEG-KYVVDIA 130
Query: 259 -NTTFSHIEEGVR-SLLTDRNKL 279
+ SH R +L D KL
Sbjct: 131 RHINISHCTPNTRVALYNDSYKL 153
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 177 (67.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 48/143 (33%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKKSK 445
+ +L YGPPGTGKT++AR +A + + ++G ++ +G + + E+F A++
Sbjct: 214 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG-EGSRMVRELFVMAREHA 272
Query: 446 KGLLLFIDEADAFLCER-NSIHM-SEAQRSALNALLFRTGDQS-RDIVLVLATNRPGDLD 502
++ F+DE D+ +R H SE QR+ + L G +S ++I +++ TNR LD
Sbjct: 273 PSII-FMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILD 331
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
A+ RID IEFP P E R
Sbjct: 332 EALLRPGRIDRKIEFPNPNVEAR 354
Score = 76 (31.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 30/143 (20%), Positives = 68/143 (47%)
Query: 148 AQGLRNEDELARKRLQTDHEAQRRHNTE-LVKMQEESSIRKEQARRSTEEQIQAQQRLTE 206
++G++NE ++ K ++ ++ N+ L + Q +S I++ + E + ++L
Sbjct: 14 SEGIKNE--ISEKNMENNNNNDNNKNSSALNEEQVQSGIKRYYELKIEEYESIINKKLQN 71
Query: 207 KERAEIERETI--RVKAMAEA-----EGRAHEAKLTEDHNRRMLIERINGEREKWLAAI- 258
K+R E +R + RV+ + + E ++ ++ + + ++ +IN E K++ I
Sbjct: 72 KKRLEAQRNELNARVRELCDEIQYLLEAASYVGEIVKPMGKNKVLVKINPEG-KYVVDIA 130
Query: 259 -NTTFSHIEEGVR-SLLTDRNKL 279
+ SH R +L D KL
Sbjct: 131 RHINISHCTPNTRVALYNDSYKL 153
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 196 (74.1 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 60/173 (34%), Positives = 88/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPF--------RNMLFYGPPGTGKTMVAREIARKSGLDYAM 417
L+++IQ L +A H+ F + +L YGPPGTGKT++AR A ++ +
Sbjct: 175 LEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK 234
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R +S E QR+
Sbjct: 235 LAGPQLVQMFIGDGAKLVRDAFLLAKE-KSPCIIFIDEIDAIGTKRFDSEVSGDREVQRT 293
Query: 474 ALNALLFRTGDQSRD-IVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G S D I ++ ATNR LD A+ + R+D IEFP P EE R
Sbjct: 294 MLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
Score = 46 (21.3 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 16/73 (21%), Positives = 39/73 (53%)
Query: 548 GHLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYA-RPDCV-LDSQ 605
G + + +K+ + +D +E AR T+ F+G ++ + V+A + A R D ++ +
Sbjct: 347 GRILQIHSRKMNVN--ADVNFEELARSTDDFNGAQLKAVC--VEAGMLALRRDATEVNHE 402
Query: 606 LFRE-VVEYKVEE 617
F E +++ + ++
Sbjct: 403 DFNEGIIQVQAKK 415
Score = 45 (20.9 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 29/173 (16%), Positives = 73/173 (42%)
Query: 95 AFDIMRKQEQTRLAELDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKAQARAQGLRNE 154
A +I +E+++ LD+E V + ++Q ++ ++L N+V+ + E
Sbjct: 32 ANEIRILKEESQRTNLDLESVKEKIKENQEKIKLNKQLPYLVGNIVE------ILEMSPE 85
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIER 214
D+ D ++QR+ ++K +I + ++ + + + +
Sbjct: 86 DDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLIL 145
Query: 215 ETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEE 267
+T+ + + + + K TED+N I + + ++ + AI +H E+
Sbjct: 146 DTLPSEYDSRVKAMEVDEKPTEDYND---IGGLEKQIQELVEAIVLPMTHKEQ 195
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 204 (76.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 61/194 (31%), Positives = 94/194 (48%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPG GKTM+A+ +A + + + G + LG + + ++F AK+
Sbjct: 194 PPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 252
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G DQS ++ +++ATNR
Sbjct: 253 NSPSII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQD 311
Query: 500 DLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQK 557
LD A+ R+D IEFPLP ++ SD+ D W + K
Sbjct: 312 TLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLED--W----VARPDK 365
Query: 558 ITIKDLSDNVIQEA 571
I+ D++ ++ QEA
Sbjct: 366 ISGADIN-SICQEA 378
Score = 44 (20.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 195 EEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEAKLTEDH 238
E+ I+ + R EKE + E R++++ G+ EA + ++H
Sbjct: 54 EDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEA-VDQNH 96
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 199 (75.1 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 61/173 (35%), Positives = 88/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPF--------RNMLFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F + +L YGPPGTGKT++AR A ++ Y
Sbjct: 173 LDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLK 232
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R +S E QR+
Sbjct: 233 LAGPQLVQMFIGDGAKLVRDAFALAKE-KGPTIIFIDELDAIGTKRFDSEVSGDREVQRT 291
Query: 474 ALNALLFRTGDQS-RDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G S +I ++ ATNR LD A+ + R+D IEFPLP EE R
Sbjct: 292 MLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEAR 344
Score = 43 (20.2 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQ 201
DE+ RK ++E + + + K E SI+K + + Q+ Q
Sbjct: 32 DEVNRKAKLLENETKVLRSEHISKHLEMDSIQKRIKENNDKLQVNTQ 78
Score = 43 (20.2 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYA 596
H+ + +K+ + +D E AR +E F+G ++ + V+A + A
Sbjct: 346 HILQIHSRKMNVS--ADVNFDELARSSEDFNGAQLKAVC--VEAGMIA 389
Score = 38 (18.4 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 121 QSQVDVERQRKLAEEHRNLVQQKAQARAQGLRNEDELAR-----KRLQTDHEAQRRHNTE 175
+S E++ + +E + + +A+ L NE ++ R K L+ D Q+R
Sbjct: 11 ESLPQAEKEAVIPDEIFQMTADEVNRKAKLLENETKVLRSEHISKHLEMD-SIQKRIKEN 69
Query: 176 LVKMQEESSI 185
K+Q + +
Sbjct: 70 NDKLQVNTQL 79
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 205 (77.2 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 58/183 (31%), Positives = 97/183 (53%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L ++Q ++H K K +P + +LFYGPPG GKT++A+ IA
Sbjct: 483 GGLENVKRE----LQETVQYPVEHPEKFE---KFGMSPSKGVLFYGPPGCGKTLLAKAIA 535
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHM 467
+ ++ + G ++ + ++ + EIFD A++S +LF DE D+ +R
Sbjct: 536 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP-CVLFFDELDSIATQRGGGSG 594
Query: 468 SEAQRSA---LNALLFRT-GDQSRDIVLVL-ATNRPGDLDSAIT--DRIDEVIEFPLPRE 520
+ +A LN LL G ++ V ++ ATNRP +DSA+ R+D++I PLP E
Sbjct: 595 GDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDE 654
Query: 521 EER 523
+ R
Sbjct: 655 DSR 657
Score = 191 (72.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 46/140 (32%), Positives = 82/140 (58%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPG+GKT++AR +A ++G + + G ++ + L ++ + + + F+ A+K+
Sbjct: 240 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 299
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVL-ATNRPGDLD 502
++ FIDE D+ +R + E +R ++ LL G +SR V+V+ ATNRP +D
Sbjct: 300 APSII-FIDEIDSIAPKREKTN-GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSID 357
Query: 503 SAIT--DRIDEVIEFPLPRE 520
A+ R D I+ +P E
Sbjct: 358 PALRRFGRFDREIDIGVPDE 377
Score = 49 (22.3 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 549 HLFKKQQQKITI-KDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYA 596
++FK +K I KD+ I A+ T+GFSG +I ++ +A YA
Sbjct: 659 NIFKAALRKSPIAKDVD---IGALAKYTQGFSGADITEICQ--RACKYA 702
Score = 46 (21.3 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DE+ A KR +T+ E +RR ++L+ +
Sbjct: 276 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLM 335
Query: 181 E 181
+
Sbjct: 336 D 336
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 202 (76.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 48/165 (29%), Positives = 91/165 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G +V + + ++ + + + F+ A+K+
Sbjct: 247 PPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKN 306
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSR-DIVLVLATNRPGDLD 502
++ FIDE D+ +R+ + E +R ++ LL G ++R ++V++ ATNRP +D
Sbjct: 307 APAII-FIDEIDSIAPKRDKTN-GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSID 364
Query: 503 SAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSL 545
A+ R D ++ +P R +D+ D +L
Sbjct: 365 PALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEAL 409
Score = 191 (72.3 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 51/151 (33%), Positives = 84/151 (55%)
Query: 380 TKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIF 438
TK +P + +LFYGPPGTGKT++A+ +A + ++ + G ++ + ++ + I +IF
Sbjct: 514 TKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIF 573
Query: 439 DWAKKSKKGLLLFIDEADAFLCERN-SI-HMSEAQRSALNALLFRT-GDQSRDIVLVL-A 494
D A+ + ++F+DE D+ R S+ A +N LL G ++ V V+ A
Sbjct: 574 DKARAAAP-TVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGA 632
Query: 495 TNRPGDLDSAIT--DRIDEVIEFPLPREEER 523
TNRP +D AI R+D++I PLP E R
Sbjct: 633 TNRPDQIDPAILRPGRLDQLIYVPLPDENAR 663
Score = 56 (24.8 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 572 ARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIKLAAEGSQ 630
A+ T+GFSG ++ ++ +AA YA D + + E KVE + +++ EG++
Sbjct: 686 AKATQGFSGADLLYIVQ--RAAKYAIKDSIEAHRQHEAEKEVKVEG--EDVEMTDEGAK 740
Score = 48 (22.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 563 LSDNVIQEA-ARKTEGFSGREIAKLMA-SVQAAVYARPDCV-LDS-QLFREVVE 612
L+D+V EA A +T G+ G +IA L + + + + D + LD ++ EV++
Sbjct: 400 LADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVLD 453
Score = 44 (20.5 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQEESSIR 186
D +A KR +T+ E +RR ++L+ + + R
Sbjct: 317 DSIAPKRDKTNGEVERRVVSQLLTLMDGMKAR 348
Score = 38 (18.4 bits), Expect = 8.7e-12, Sum P(3) = 8.7e-12
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 110 LDVEKVHYEAIQSQVDVERQRKLAEEH----RNLVQQKAQARAQGLRNEDEL 157
L+V ++H + ++ DV+ + AE H ++ ++A Q +R + +L
Sbjct: 388 LEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDL 439
>SGD|S000005995 [details] [associations]
symbol:YTA6 "Putative ATPase of the CDC48/PAS1/SEC18 (AAA)
family" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000005995
GO:GO:0005524 GO:GO:0005938 GO:GO:0016887 EMBL:BK006949
eggNOG:COG0464 EMBL:U41849 GeneTree:ENSGT00570000078874 EMBL:M14145
EMBL:X81071 PIR:S61113 RefSeq:NP_015251.1 ProteinModelPortal:P40328
SMR:P40328 DIP:DIP-4025N IntAct:P40328 MINT:MINT-546593
STRING:P40328 PaxDb:P40328 PRIDE:P40328 EnsemblFungi:YPL074W
GeneID:856031 KEGG:sce:YPL074W CYGD:YPL074w HOGENOM:HOG000066024
OMA:QDIRIAR OrthoDB:EOG4SN4XK NextBio:980956 Genevestigator:P40328
GermOnline:YPL074W Uniprot:P40328
Length = 754
Score = 166 (63.5 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 66/216 (30%), Positives = 101/216 (46%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R ML +GPPGTGKTM+A+ +A +S + ++ + LG ++ + +F AKK
Sbjct: 503 PVRGMLLFGPPGTGKTMIAKAVATESNSTFFSVSASSLLSKYLG-ESEKLVRALFYMAKK 561
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQR---------SALNALLFRTGDQSRDI---VL 491
++ FIDE D+ L R+ ++R S+L++ ++ D++ + VL
Sbjct: 562 LSPSII-FIDEIDSMLTARSDNENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVL 620
Query: 492 VL-ATNRPGDLDSAITDRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHL 550
VL ATN P +D A R + PLP E R LK L
Sbjct: 621 VLGATNLPWAIDDAARRRFSRKLYIPLPDYETRLYH------------------LK--RL 660
Query: 551 FKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
KQ K +++DL +I E TEGFSG ++ L
Sbjct: 661 MAKQ--KNSLQDLDYELITEM---TEGFSGSDLTSL 691
Score = 92 (37.4 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 41/153 (26%), Positives = 73/153 (47%)
Query: 103 EQTRLAELDVEKVHYEA-IQSQVD-VERQRKLAEEHRNLVQQKAQARAQGLRNEDELARK 160
++ +L E D EK EA I Q D + R RKL EE + L + R L+ E + K
Sbjct: 149 KRDKLKEAD-EK---EAKINKQADNIRRARKL-EEEKKLGAKLQYERDLELQREKLIELK 203
Query: 161 -RLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRV 219
+ + + E ++ E VK +EE +EQA + ++ +++ K RA ++
Sbjct: 204 VKEKVEFEVAQKLEEERVKREEEERKHREQAEKKRISTLKHERKTNYKSRASLDN----F 259
Query: 220 KAMAEAEGRAHEAKLTEDHNRRML-IERINGER 251
+ +++ G+ + + RR L + R +GER
Sbjct: 260 SSSSKSSGKIDNSLI----KRRSLDVVRTSGER 288
Score = 63 (27.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 35/153 (22%), Positives = 67/153 (43%)
Query: 89 SRHAREAFDIMRKQEQTRLAELDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKAQARA 148
+R E + K + R EL EK+ ++ +V+ E +KL EE V+++ + R
Sbjct: 173 ARKLEEEKKLGAKLQYERDLELQREKLIELKVKEKVEFEVAQKLEEER---VKREEEER- 228
Query: 149 QGLRNEDELARKRLQT-DHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEK 207
++ ++ +KR+ T HE + + + + SS K + I+ + +
Sbjct: 229 ---KHREQAEKKRISTLKHERKTNYKSR-ASLDNFSSSSKSSGKIDNS-LIKRRSLDVVR 283
Query: 208 ERAEIERETIRVKAMAEAE-GRAHEAKLTEDHN 239
E R +R K+M AE G A + ++ N
Sbjct: 284 TSGERVRTPVR-KSMEAAEIGMAAQLAWSQYQN 315
>RGD|1308494 [details] [associations]
symbol:Spast "spastin" species:10116 "Rattus norvegicus"
[GO:0001578 "microtubule bundle formation" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
"endosome" evidence=ISO;ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISO;ISS] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA;ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO;ISS] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007109 "cytokinesis, completion of
separation" evidence=ISO;ISS] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=ISO;ISS] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISO;ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO;ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA;ISO] [GO:0034214 "protein hexamerization"
evidence=ISO;ISS] [GO:0043014 "alpha-tubulin binding"
evidence=ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048487 "beta-tubulin binding" evidence=ISO;ISS]
[GO:0051013 "microtubule severing" evidence=ISO;ISS] [GO:0051260
"protein homooligomerization" evidence=ISO;ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0007109 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0043014
SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:BC166846
IPI:IPI00365573 RefSeq:NP_001102172.2 UniGene:Rn.41645
ProteinModelPortal:B2RYN7 SMR:B2RYN7 STRING:B2RYN7 PRIDE:B2RYN7
GeneID:362700 KEGG:rno:362700 UCSC:RGD:1308494 NextBio:680920
ArrayExpress:B2RYN7 Genevestigator:B2RYN7 Uniprot:B2RYN7
Length = 581
Score = 203 (76.5 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 63/203 (31%), Positives = 104/203 (51%)
Query: 328 SGLLSQAMNKVIRNKTSA---GTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQ 384
S L + MN+++ N T+ AG A + +I++ PSL+ + T + +
Sbjct: 287 SNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELF--------TGL-R 337
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A++
Sbjct: 338 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARE 397
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR--DIVLVL-ATNRPGD 500
+ ++ FIDE D+ LCER ++R L+ G QS D VLV+ ATNRP +
Sbjct: 398 LQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQE 456
Query: 501 LDSAITDRIDEVIEFPLPREEER 523
LD A+ R + + LP EE R
Sbjct: 457 LDEAVLRRFIKRVYVSLPNEETR 479
Score = 49 (22.3 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
+L KQ +T K+L+ + AR T+G+SG ++ L
Sbjct: 485 NLLCKQGSPLTQKELA-----QLARMTDGYSGSDLTAL 517
>UNIPROTKB|F1M9D2 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
SMART:SM00745 GeneTree:ENSGT00570000078874 IPI:IPI00365573
Ensembl:ENSRNOT00000039375 ArrayExpress:F1M9D2 Uniprot:F1M9D2
Length = 581
Score = 203 (76.5 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 63/203 (31%), Positives = 104/203 (51%)
Query: 328 SGLLSQAMNKVIRNKTSA---GTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQ 384
S L + MN+++ N T+ AG A + +I++ PSL+ + T + +
Sbjct: 287 SNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELF--------TGL-R 337
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A++
Sbjct: 338 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARE 397
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR--DIVLVL-ATNRPGD 500
+ ++ FIDE D+ LCER ++R L+ G QS D VLV+ ATNRP +
Sbjct: 398 LQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQE 456
Query: 501 LDSAITDRIDEVIEFPLPREEER 523
LD A+ R + + LP EE R
Sbjct: 457 LDEAVLRRFIKRVYVSLPNEETR 479
Score = 49 (22.3 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
+L KQ +T K+L+ + AR T+G+SG ++ L
Sbjct: 485 NLLCKQGSPLTQKELA-----QLARMTDGYSGSDLTAL 517
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 208 (78.3 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 51/161 (31%), Positives = 86/161 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVLA-TNRPGDLD 502
++ FIDE DA +R H E +R ++ LL G + R V+V+A TNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 503 SAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGD 541
A+ R D ++ +P R SD+ D
Sbjct: 355 PALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVD 395
Score = 187 (70.9 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 54/183 (29%), Positives = 95/183 (51%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L +Q ++H K K P + +LFYGPPG GKT++A+ IA
Sbjct: 480 GGLEDVKRE----LQELVQYPVEHPDKFL---KFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHM 467
+ ++ + G ++ + ++ + EIFD A+++ +LF DE D+ R ++
Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFDELDSIAKARGG-NI 590
Query: 468 SEAQRSA---LNALLFRTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPRE 520
+ +A +N +L S +++ ++ ATNRP +D AI R+D++I PLP E
Sbjct: 591 GDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 521 EER 523
+ R
Sbjct: 651 KSR 653
Score = 48 (22.0 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLM--ASVQA 592
LSD+V +++ A +T G G ++A L A++QA
Sbjct: 390 LSDDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 46 (21.3 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DEL A KR +T E +RR ++L+ +
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 332
Query: 181 E 181
+
Sbjct: 333 D 333
Score = 38 (18.4 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T GFSG ++ ++
Sbjct: 676 AKMTNGFSGADLTEI 690
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 208 (78.3 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 51/161 (31%), Positives = 86/161 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVLA-TNRPGDLD 502
++ FIDE DA +R H E +R ++ LL G + R V+V+A TNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 503 SAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGD 541
A+ R D ++ +P R SD+ D
Sbjct: 355 PALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVD 395
Score = 187 (70.9 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 54/183 (29%), Positives = 95/183 (51%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L +Q ++H K K P + +LFYGPPG GKT++A+ IA
Sbjct: 480 GGLEDVKRE----LQELVQYPVEHPDKFL---KFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHM 467
+ ++ + G ++ + ++ + EIFD A+++ +LF DE D+ R ++
Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFDELDSIAKARGG-NI 590
Query: 468 SEAQRSA---LNALLFRTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPRE 520
+ +A +N +L S +++ ++ ATNRP +D AI R+D++I PLP E
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 521 EER 523
+ R
Sbjct: 651 KSR 653
Score = 48 (22.0 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLM--ASVQA 592
LSD+V +++ A +T G G ++A L A++QA
Sbjct: 390 LSDDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 46 (21.3 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DEL A KR +T E +RR ++L+ +
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 332
Query: 181 E 181
+
Sbjct: 333 D 333
Score = 38 (18.4 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T GFSG ++ ++
Sbjct: 676 AKMTNGFSGADLTEI 690
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 197 (74.4 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 59/182 (32%), Positives = 95/182 (52%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L S+Q + H K K +P R +LFYGPPGTGKTM+A+ +A
Sbjct: 502 GGLEEVKRE----LIESVQYPVDHPEKFQ---KFGLSPSRGVLFYGPPGTGKTMLAKAVA 554
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERN-SI- 465
+ ++ + G ++ + ++ + I +IFD A+ + ++F+DE D+ R S+
Sbjct: 555 NECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAP-CVVFLDELDSIAKSRGGSVG 613
Query: 466 HMSEAQRSALNALLFRT-GDQSRDIVLVL-ATNRPGDLDSAIT--DRIDEVIEFPLPREE 521
A +N LL G S+ V V+ ATNRP LD+A+ R+D ++ PLP +
Sbjct: 614 DAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQA 673
Query: 522 ER 523
R
Sbjct: 674 SR 675
Score = 196 (74.1 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 43/138 (31%), Positives = 83/138 (60%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + + ++ + + + F+ A+K+
Sbjct: 258 PPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 317
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSR-DIVLVLATNRPGDLD 502
++ FIDE D+ +R + E +R ++ LL G ++R ++V++ ATNRP +D
Sbjct: 318 SPAII-FIDEIDSIAPKREKTN-GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSID 375
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D ++ +P
Sbjct: 376 PALRRFGRFDREVDIGIP 393
Score = 57 (25.1 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 550 LFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL-MASVQAAVYARPDCVLDSQLFR 608
+ K Q +K + SD I+ A KT GFSG ++ + +V+ A+ ++ Q R
Sbjct: 678 ILKAQLRKTPVA--SDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESISAEIERQKQR 735
Query: 609 EVV--EYKVEEHHQ 620
E + K+E+ +
Sbjct: 736 EAAGEDVKMEDEEE 749
Score = 45 (20.9 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQEESSIR 186
D +A KR +T+ E +RR ++L+ + + R
Sbjct: 328 DSIAPKREKTNGEVERRVVSQLLTLMDGMKAR 359
Score = 37 (18.1 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKL 586
L ++V ++ A +T G+ G ++A L
Sbjct: 411 LGEDVDLETIAAETHGYVGSDLASL 435
>TAIR|locus:2137261 [details] [associations]
symbol:AT4G04180 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GO:GO:0017111 IPI:IPI00543933 RefSeq:NP_192327.3
UniGene:At.34057 ProteinModelPortal:F4JGS0 SMR:F4JGS0 PRIDE:F4JGS0
EnsemblPlants:AT4G04180.1 GeneID:825733 KEGG:ath:AT4G04180
OMA:SEMHEAT Uniprot:F4JGS0
Length = 609
Score = 208 (78.3 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 52/139 (37%), Positives = 77/139 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKSKK 446
R +LF GPPGTGKT AR IA ++G+ + V + ++ + +F A +
Sbjct: 362 RAVLFEGPPGTGKTSCARVIANQAGIPLLYVPLEAVMSKYYGESERLLGAVFSQANELPD 421
Query: 447 GLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTG--DQSRDIVLVLATNRPGDLDSA 504
G ++F+DE DAF R+S M EA R L+ LL + +Q + +V++ ATNR DLD A
Sbjct: 422 GAIIFLDEIDAFAISRDS-EMHEATRRVLSVLLRQIDGFEQEKKVVVIAATNRKQDLDPA 480
Query: 505 ITDRIDEVIEFPLPREEER 523
+ R D +I F LP + R
Sbjct: 481 LISRFDSMIMFDLPDLQTR 499
Score = 44 (20.5 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 561 KDLSDNVIQEAARKTEGFSGREI 583
K LS + + A+ TE SGR+I
Sbjct: 508 KQLSKPELVQLAQATEAMSGRDI 530
>UNIPROTKB|A2VDN5 [details] [associations]
symbol:SPAST "Spastin" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0007109
"cytokinesis, completion of separation" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] [GO:0051260 "protein
homooligomerization" evidence=ISS] [GO:0051013 "microtubule
severing" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0043014 "alpha-tubulin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005768 "endosome" evidence=ISS]
[GO:0030496 "midbody" evidence=ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0048487 GO:GO:0008017 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 EMBL:BC133327 IPI:IPI00840116
RefSeq:NP_001075060.1 UniGene:Bt.46123 ProteinModelPortal:A2VDN5
SMR:A2VDN5 STRING:A2VDN5 Ensembl:ENSBTAT00000046919 GeneID:521442
KEGG:bta:521442 CTD:6683 HOVERGEN:HBG108502 InParanoid:A2VDN5
OMA:HKSTPKT OrthoDB:EOG4NZTTF NextBio:20873307 ArrayExpress:A2VDN5
Uniprot:A2VDN5
Length = 614
Score = 205 (77.2 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 63/203 (31%), Positives = 104/203 (51%)
Query: 328 SGLLSQAMNKVIRNKTSA---GTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQ 384
S L + MN+++ N T+ AG A + +I++ PSL+ + T + +
Sbjct: 320 SNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELF--------TGL-R 370
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A++
Sbjct: 371 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARE 430
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR--DIVLVL-ATNRPGD 500
+ ++ FIDE D+ LCER ++R L+ G QS D VLV+ ATNRP +
Sbjct: 431 LQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQE 489
Query: 501 LDSAITDRIDEVIEFPLPREEER 523
LD A+ R + + LP EE R
Sbjct: 490 LDEAVLRRFTKRVYVSLPNEETR 512
Score = 47 (21.6 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
+L KQ +T K+L+ + AR T G+SG ++ L
Sbjct: 518 NLLCKQGSPLTQKELA-----QLARMTNGYSGSDLTAL 550
>UNIPROTKB|D4A0I3 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
RGD:1308494 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 SMART:SM00745 GO:GO:0034214
OrthoDB:EOG4NZTTF IPI:IPI00947816 Ensembl:ENSRNOT00000068220
ArrayExpress:D4A0I3 Uniprot:D4A0I3
Length = 613
Score = 203 (76.5 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 63/203 (31%), Positives = 104/203 (51%)
Query: 328 SGLLSQAMNKVIRNKTSA---GTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQ 384
S L + MN+++ N T+ AG A + +I++ PSL+ + T + +
Sbjct: 319 SNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELF--------TGL-R 369
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A++
Sbjct: 370 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARE 429
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR--DIVLVL-ATNRPGD 500
+ ++ FIDE D+ LCER ++R L+ G QS D VLV+ ATNRP +
Sbjct: 430 LQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQE 488
Query: 501 LDSAITDRIDEVIEFPLPREEER 523
LD A+ R + + LP EE R
Sbjct: 489 LDEAVLRRFIKRVYVSLPNEETR 511
Score = 49 (22.3 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
+L KQ +T K+L+ + AR T+G+SG ++ L
Sbjct: 517 NLLCKQGSPLTQKELA-----QLARMTDGYSGSDLTAL 549
>MGI|MGI:1858896 [details] [associations]
symbol:Spast "spastin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768 "endosome"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007109
"cytokinesis, completion of separation" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=ISO] [GO:0008568 "microtubule-severing ATPase
activity" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=ISO] [GO:0034214 "protein hexamerization"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=ISO] [GO:0051013
"microtubule severing" evidence=ISO;IGI;IMP;IDA] [GO:0051260
"protein homooligomerization" evidence=ISO] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1858896 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AK129282 EMBL:BC046286 EMBL:AK007793
EMBL:AJ246002 IPI:IPI00420580 RefSeq:NP_001156342.1
RefSeq:NP_058658.2 UniGene:Mm.19804 ProteinModelPortal:Q9QYY8
SMR:Q9QYY8 STRING:Q9QYY8 PhosphoSite:Q9QYY8 PaxDb:Q9QYY8
PRIDE:Q9QYY8 Ensembl:ENSMUST00000024869 GeneID:50850 KEGG:mmu:50850
UCSC:uc008dnz.2 InParanoid:Q9QYY8 NextBio:307827 Bgee:Q9QYY8
CleanEx:MM_SPAST Genevestigator:Q9QYY8
GermOnline:ENSMUSG00000024068 Uniprot:Q9QYY8
Length = 614
Score = 203 (76.5 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 63/203 (31%), Positives = 104/203 (51%)
Query: 328 SGLLSQAMNKVIRNKTSA---GTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQ 384
S L + MN+++ N T+ AG A + +I++ PSL+ + T + +
Sbjct: 320 SNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELF--------TGL-R 370
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A++
Sbjct: 371 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARE 430
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR--DIVLVL-ATNRPGD 500
+ ++ FIDE D+ LCER ++R L+ G QS D VLV+ ATNRP +
Sbjct: 431 LQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQE 489
Query: 501 LDSAITDRIDEVIEFPLPREEER 523
LD A+ R + + LP EE R
Sbjct: 490 LDEAVLRRFIKRVYVSLPNEETR 512
Score = 49 (22.3 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
+L KQ +T K+L+ + AR T+G+SG ++ L
Sbjct: 518 NLLCKQGSPLTQKELA-----QLARMTDGYSGSDLTAL 550
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 207 (77.9 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 80/275 (29%), Positives = 128/275 (46%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP 425
L+ I +L + TKI + +L G PGTGKT++AR IA ++ + + +G +
Sbjct: 266 LEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQASGSEFEE 325
Query: 426 L--GAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTG 483
+ G A +I E+F AKK ++FIDE DA +R+S S A R LN LL
Sbjct: 326 MFVGVGA-RRIRELFQAAKKHAP-CIVFIDEIDAVGSKRSSRDNS-AVRMTLNQLLVELD 382
Query: 484 --DQSRDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDE 539
+Q+ IV++ ATN P LD A+ R+D+ I PLP + R+ S +
Sbjct: 383 GFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKGRYEILKMYSNKIVLSKD 442
Query: 540 GDSSSLKWGHLFKKQQQKITIKDLSDNVIQEAARK--TEGFSGREIAKL-MASVQAAVYA 596
D H+ ++ +T DL+ N++ AA K EG ++ + A + V
Sbjct: 443 VDL------HVLSRRTVGMTGADLN-NILNIAAIKCSVEGKKSVDMNSIEQAFDRVVVGL 495
Query: 597 RPDCVLDSQLFREVVEYKVEEHHQRIKLAAEGSQP 631
+ L+ + + + Y E H + +GS P
Sbjct: 496 QRKSPLNEEE-KNITAYH-EGGHTLVNFYTKGSDP 528
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 207 (77.9 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 80/275 (29%), Positives = 128/275 (46%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP 425
L+ I +L + TKI + +L G PGTGKT++AR IA ++ + + +G +
Sbjct: 266 LEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQASGSEFEE 325
Query: 426 L--GAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTG 483
+ G A +I E+F AKK ++FIDE DA +R+S S A R LN LL
Sbjct: 326 MFVGVGA-RRIRELFQAAKKHAP-CIVFIDEIDAVGSKRSSRDNS-AVRMTLNQLLVELD 382
Query: 484 --DQSRDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDE 539
+Q+ IV++ ATN P LD A+ R+D+ I PLP + R+ S +
Sbjct: 383 GFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKGRYEILKMYSNKIVLSKD 442
Query: 540 GDSSSLKWGHLFKKQQQKITIKDLSDNVIQEAARK--TEGFSGREIAKL-MASVQAAVYA 596
D H+ ++ +T DL+ N++ AA K EG ++ + A + V
Sbjct: 443 VDL------HVLSRRTVGMTGADLN-NILNIAAIKCSVEGKKSVDMNSIEQAFDRVVVGL 495
Query: 597 RPDCVLDSQLFREVVEYKVEEHHQRIKLAAEGSQP 631
+ L+ + + + Y E H + +GS P
Sbjct: 496 QRKSPLNEEE-KNITAYH-EGGHTLVNFYTKGSDP 528
>UNIPROTKB|F1PR99 [details] [associations]
symbol:SPAST "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0043014
"alpha-tubulin binding" evidence=IEA] [GO:0034214 "protein
hexamerization" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0007109 "cytokinesis,
completion of separation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005768 GO:GO:0051260
Pfam:PF04212 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
SMART:SM00745 GO:GO:0034214 GeneTree:ENSGT00570000078874 KO:K13254
CTD:6683 OMA:HKSTPKT EMBL:AAEX03010834 RefSeq:XP_850973.1
Ensembl:ENSCAFT00000009227 GeneID:608582 KEGG:cfa:608582
Uniprot:F1PR99
Length = 624
Score = 203 (76.5 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 63/203 (31%), Positives = 104/203 (51%)
Query: 328 SGLLSQAMNKVIRNKTSA---GTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQ 384
S L + MN+++ N T+ AG A + +I++ PSL+ + T + +
Sbjct: 330 SNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELF--------TGL-R 380
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A++
Sbjct: 381 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARE 440
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR--DIVLVL-ATNRPGD 500
+ ++ FIDE D+ LCER ++R L+ G QS D VLV+ ATNRP +
Sbjct: 441 LQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQE 499
Query: 501 LDSAITDRIDEVIEFPLPREEER 523
LD A+ R + + LP EE R
Sbjct: 500 LDEAVLRRFIKRVYVSLPNEETR 522
Score = 49 (22.3 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
+L KQ +T K+L+ + AR T+G+SG ++ L
Sbjct: 528 NLLCKQGSPLTQKELA-----QLARMTDGYSGSDLTAL 560
>UNIPROTKB|Q9UBP0 [details] [associations]
symbol:SPAST "Spastin" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IPI] [GO:0008568
"microtubule-severing ATPase activity" evidence=IDA] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0043014 "alpha-tubulin
binding" evidence=IPI] [GO:0051013 "microtubule severing"
evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0034214 "protein hexamerization" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0007109 "cytokinesis,
completion of separation" evidence=IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0001578 "microtubule
bundle formation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030496 "midbody" evidence=IDA] [GO:0031410 "cytoplasmic
vesicle" evidence=IDA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 EMBL:CH471053 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0008219 GO:GO:0005768 GO:GO:0051260
GO:GO:0031410 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0007109 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
SMART:SM00745 PDB:3EAB PDBsum:3EAB GO:GO:0034214
HOGENOM:HOG000225146 KO:K13254 HAMAP:MF_03021 CTD:6683
HOVERGEN:HBG108502 OMA:HKSTPKT OrthoDB:EOG4NZTTF EMBL:AJ246001
EMBL:AJ246003 EMBL:AB029006 EMBL:BC150260 IPI:IPI00002707
IPI:IPI00219816 IPI:IPI00923524 IPI:IPI00923553 RefSeq:NP_055761.2
RefSeq:NP_955468.1 UniGene:Hs.468091 PDB:3VFD PDBsum:3VFD
ProteinModelPortal:Q9UBP0 SMR:Q9UBP0 IntAct:Q9UBP0 STRING:Q9UBP0
PhosphoSite:Q9UBP0 DMDM:12230611 PaxDb:Q9UBP0 PeptideAtlas:Q9UBP0
PRIDE:Q9UBP0 Ensembl:ENST00000315285 Ensembl:ENST00000345662
GeneID:6683 KEGG:hsa:6683 UCSC:uc002roc.3 GeneCards:GC02P032288
HGNC:HGNC:11233 HPA:HPA017311 MIM:182601 MIM:604277
neXtProt:NX_Q9UBP0 Orphanet:100985 PharmGKB:PA36063
InParanoid:Q9UBP0 PhylomeDB:Q9UBP0 ChiTaRS:SPAST
EvolutionaryTrace:Q9UBP0 GenomeRNAi:6683 NextBio:26047
ArrayExpress:Q9UBP0 Bgee:Q9UBP0 CleanEx:HS_SPAST
Genevestigator:Q9UBP0 Uniprot:Q9UBP0
Length = 616
Score = 202 (76.2 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 63/203 (31%), Positives = 104/203 (51%)
Query: 328 SGLLSQAMNKVIRNKTSA---GTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQ 384
S L + MN+++ N T+ AG A + +I++ PSL+ + T + +
Sbjct: 322 SNLANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELF--------TGL-R 372
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A++
Sbjct: 373 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARE 432
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR--DIVLVL-ATNRPGD 500
+ ++ FIDE D+ LCER ++R L+ G QS D VLV+ ATNRP +
Sbjct: 433 LQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQE 491
Query: 501 LDSAITDRIDEVIEFPLPREEER 523
LD A+ R + + LP EE R
Sbjct: 492 LDEAVLRRFIKRVYVSLPNEETR 514
Score = 49 (22.3 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
+L KQ +T K+L+ + AR T+G+SG ++ L
Sbjct: 520 NLLCKQGSPLTQKELA-----QLARMTDGYSGSDLTAL 552
>UNIPROTKB|Q05AS3 [details] [associations]
symbol:spast "Spastin" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0051301 GO:GO:0051260 GO:GO:0005815 GO:GO:0007049
Pfam:PF04212 eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:CR760974
EMBL:BC123973 RefSeq:NP_001016453.1 UniGene:Str.10574
ProteinModelPortal:Q05AS3 SMR:Q05AS3 STRING:Q05AS3
Ensembl:ENSXETT00000057121 GeneID:549207 KEGG:xtr:549207
Xenbase:XB-GENE-947839 Bgee:Q05AS3 Uniprot:Q05AS3
Length = 603
Score = 197 (74.4 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 49/144 (34%), Positives = 78/144 (54%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAK 442
+AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A+
Sbjct: 359 RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVAR 418
Query: 443 KSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR--DIVLVL-ATNRPG 499
+ + ++ FIDE D+ LCER ++R L+ G QS D VLV+ ATNRP
Sbjct: 419 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQ 477
Query: 500 DLDSAITDRIDEVIEFPLPREEER 523
+LD A+ R + + LP EE R
Sbjct: 478 ELDDAVLRRFTKRVYVSLPNEETR 501
Score = 48 (22.0 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 563 LSDNVIQEAARKTEGFSGREIAKL 586
L++ + + +R TEG+SG +I L
Sbjct: 516 LNEKELTQLSRLTEGYSGSDITAL 539
Score = 46 (21.3 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 127 ER-QRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESSI 185
ER R++ + + + A A AQ E E+ R H+ ++ + +++ EE
Sbjct: 78 ERLSRRVMADKGSTAARTAAAPAQDRPQEPEVVRSY----HQQAFQYISMALRIDEEEKD 133
Query: 186 RKEQA 190
+KEQA
Sbjct: 134 QKEQA 138
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 197 (74.4 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 60/187 (32%), Positives = 92/187 (49%)
Query: 362 LHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGG 421
L +Q + H K K +P R +LFYGPPGTGKTM+A+ +A + ++ + G
Sbjct: 508 LREQVQYPVDHPEKFL---KFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGP 564
Query: 422 DVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERN-SI-HMSEAQRSALNAL 478
++ + ++ + I +IFD A+ + ++F+DE D+ R S+ A +N L
Sbjct: 565 ELLSMWFGESESNIRDIFDKARAAAP-CIVFLDELDSIAKARGGSVGDAGGASDRVVNQL 623
Query: 479 LFRT-GDQSRDIVLVL-ATNRPGDLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXX 534
L G S+ V V+ ATNRP LD A+ R+D +I PLP E R
Sbjct: 624 LTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELGRLSILKAQLRKT 683
Query: 535 XCSDEGD 541
SD+ D
Sbjct: 684 PVSDDVD 690
Score = 196 (74.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 43/138 (31%), Positives = 83/138 (60%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + + ++ + + + F+ A+K+
Sbjct: 255 PPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 314
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSR-DIVLVLATNRPGDLD 502
++ FIDE D+ +R + E +R ++ LL G ++R ++V++ ATNRP +D
Sbjct: 315 SPAII-FIDEIDSIAPKREKTN-GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSID 372
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D ++ +P
Sbjct: 373 PALRRFGRFDREVDIGIP 390
Score = 55 (24.4 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 550 LFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL-MASVQAAV 594
+ K Q +K + D D +Q A KT GFSG ++ + +V+ A+
Sbjct: 675 ILKAQLRKTPVSDDVD--LQYIANKTHGFSGADLGFITQRAVKIAI 718
Score = 45 (20.9 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQEESSIR 186
D +A KR +T+ E +RR ++L+ + + R
Sbjct: 325 DSIAPKREKTNGEVERRVVSQLLTLMDGMKAR 356
Score = 44 (20.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKL 586
L D+V +++ A +T G+ G ++A L
Sbjct: 408 LGDDVDLEQIAAETHGYVGSDVAAL 432
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 191 (72.3 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 58/173 (33%), Positives = 88/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F N+ L YGPPGTGKT++AR A ++ +
Sbjct: 186 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 245
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 246 LAGPQLVQMFIGDGAKLVRDAFALAKE-KAPSIIFIDELDATGTKRFDSEKAGDREVQRT 304
Query: 474 ALNALLFRTGDQ-SRDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G Q + + ++ ATNR LD A+ + R+D+ IEFP+P EE R
Sbjct: 305 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMPNEEAR 357
Score = 54 (24.1 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 181 EESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRV 219
E+ I +E + STEE IQ + RL + E ++ E +RV
Sbjct: 20 EQDGIGEEVLKMSTEEIIQ-RTRLLDSEIKIMKSEVLRV 57
Score = 49 (22.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 125 DVERQRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESS 184
DV RQ K+A Q + E+ + R RL D E + +E++++ E
Sbjct: 5 DVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRL-LDSEIKIM-KSEVLRVTHELQ 62
Query: 185 IRKEQARRSTEE 196
K++ + ++E+
Sbjct: 63 AMKDKIKENSEK 74
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 191 (72.3 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 58/173 (33%), Positives = 87/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F N+ L YGPPGTGKT++AR A ++ +
Sbjct: 191 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 250
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 251 LAGPQLVQMFIGDGAKLVRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 309
Query: 474 ALNALLFRTGDQ-SRDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G Q + + ++ ATNR LD A+ + R+D IEFP+P EE R
Sbjct: 310 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 362
Score = 54 (24.1 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 181 EESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRV 219
E+ I +E + STEE IQ + RL + E ++ E +RV
Sbjct: 25 EQDGIGEEVLKMSTEEIIQ-RTRLLDSEIKIMKSEVLRV 62
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 191 (72.3 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 58/173 (33%), Positives = 87/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F N+ L YGPPGTGKT++AR A ++ +
Sbjct: 191 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 250
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 251 LAGPQLVQMFIGDGAKLVRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 309
Query: 474 ALNALLFRTGDQ-SRDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G Q + + ++ ATNR LD A+ + R+D IEFP+P EE R
Sbjct: 310 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 362
Score = 54 (24.1 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 181 EESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRV 219
E+ I +E + STEE IQ + RL + E ++ E +RV
Sbjct: 25 EQDGIGEEVLKMSTEEIIQ-RTRLLDSEIKIMKSEVLRV 62
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 198 (74.8 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 47/144 (32%), Positives = 81/144 (56%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPG+GKT +AR +A ++G + ++ G +V + + +A + F+ A+K+
Sbjct: 240 PPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKN 299
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSR-DIVLVLATNRPGDLD 502
++ FIDE D+ +R + E +R ++ LL G +SR +V++ ATNR +D
Sbjct: 300 SPAII-FIDEIDSIAPKREKTN-GEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSID 357
Query: 503 SAIT--DRIDEVIEFPLPREEERF 524
A+ R D I+ +P + RF
Sbjct: 358 PALRRFGRFDREIDIGVPDDNGRF 381
Score = 182 (69.1 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 54/178 (30%), Positives = 92/178 (51%)
Query: 349 GPVEAIKNN-GDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREI 407
G ++ +K+ ++IL+P I H K K +P R +LFYGPPG GKT++A+ +
Sbjct: 483 GGLDEVKSTLREMILYP-----IDHPDKFE---KFGMSPSRGVLFYGPPGCGKTLLAKAV 534
Query: 408 ARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSI- 465
A + ++ + G ++ + ++ + E+FD A+ + +LF DE D+ +R S
Sbjct: 535 ASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAP-CVLFFDELDSIGTQRGSSL 593
Query: 466 -HMSEAQRSALNALLFRTGD--QSRDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLP 518
S A +N LL +++ + ATNRP LD A+ R+D++I PLP
Sbjct: 594 GDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLP 651
Score = 56 (24.8 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKL-MASVQAAV 594
+++NV I A+KT GFSG ++A+L + +AA+
Sbjct: 669 VAENVPIDFLAQKTAGFSGADLAELCQRAARAAI 702
Score = 54 (24.1 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLMASVQ-AAVYARPDCV-LDSQLF-REVVEYK-VEE 617
LS +V ++E A T GF G ++A+L + + D + L+ ++ +EV+E V +
Sbjct: 393 LSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEIIDKEVLESMCVTQ 452
Query: 618 HHQRIKL 624
H + L
Sbjct: 453 DHFNMAL 459
Score = 44 (20.5 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQE 181
D +A KR +T+ E +RR ++L+ + +
Sbjct: 310 DSIAPKREKTNGEVERRVVSQLLTLMD 336
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 198 (74.8 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 47/144 (32%), Positives = 81/144 (56%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPG+GKT +AR +A ++G + ++ G +V + + +A + F+ A+K+
Sbjct: 240 PPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKN 299
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSR-DIVLVLATNRPGDLD 502
++ FIDE D+ +R + E +R ++ LL G +SR +V++ ATNR +D
Sbjct: 300 SPAII-FIDEIDSIAPKREKTN-GEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSID 357
Query: 503 SAIT--DRIDEVIEFPLPREEERF 524
A+ R D I+ +P + RF
Sbjct: 358 PALRRFGRFDREIDIGVPDDNGRF 381
Score = 182 (69.1 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 54/178 (30%), Positives = 92/178 (51%)
Query: 349 GPVEAIKNN-GDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREI 407
G ++ +K+ ++IL+P I H K K +P R +LFYGPPG GKT++A+ +
Sbjct: 483 GGLDEVKSTLREMILYP-----IDHPDKFE---KFGMSPSRGVLFYGPPGCGKTLLAKAV 534
Query: 408 ARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSI- 465
A + ++ + G ++ + ++ + E+FD A+ + +LF DE D+ +R S
Sbjct: 535 ASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAP-CVLFFDELDSIGTQRGSSL 593
Query: 466 -HMSEAQRSALNALLFRTGD--QSRDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLP 518
S A +N LL +++ + ATNRP LD A+ R+D++I PLP
Sbjct: 594 GDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLP 651
Score = 56 (24.8 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKL-MASVQAAV 594
+++NV I A+KT GFSG ++A+L + +AA+
Sbjct: 669 VAENVPIDFLAQKTAGFSGADLAELCQRAARAAI 702
Score = 54 (24.1 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLMASVQ-AAVYARPDCV-LDSQLF-REVVEYK-VEE 617
LS +V ++E A T GF G ++A+L + + D + L+ ++ +EV+E V +
Sbjct: 393 LSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEIIDKEVLESMCVTQ 452
Query: 618 HHQRIKL 624
H + L
Sbjct: 453 DHFNMAL 459
Score = 44 (20.5 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQE 181
D +A KR +T+ E +RR ++L+ + +
Sbjct: 310 DSIAPKREKTNGEVERRVVSQLLTLMD 336
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 186 (70.5 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 50/143 (34%), Positives = 78/143 (54%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 183 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAP 242
Query: 447 GLLLFIDEADAF---LCERNSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++ F+DE D+ E S SE QR+ L L G + +++I +++ATNR LD
Sbjct: 243 SII-FMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 301
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
A+ RID IEFP P EE R
Sbjct: 302 PALLRPGRIDRKIEFPPPNEEAR 324
Score = 57 (25.1 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 127 ERQRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESSI 185
E Q +AE+H+NL ++ QA+ L + + R+ LQ E Q + E+VK ++ +
Sbjct: 29 ELQLVVAEKHQNL--RRLQAQRNELNAKVRMLREELQLLQE-QGSYVGEVVKPMDKKKV 84
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 191 (72.3 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 58/173 (33%), Positives = 87/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F N+ L YGPPGTGKT++AR A ++ +
Sbjct: 191 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 250
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 251 LAGPQLVQMFIGDGAKLVRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 309
Query: 474 ALNALLFRTGDQ-SRDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G Q + + ++ ATNR LD A+ + R+D IEFP+P EE R
Sbjct: 310 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 362
Score = 53 (23.7 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 181 EESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRV 219
E+ I +E + STEE +Q + RL + E ++ E +RV
Sbjct: 25 EQDGIGEEVLKMSTEEIVQ-RTRLLDSEIKIMKSEVLRV 62
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 191 (72.3 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 58/173 (33%), Positives = 87/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F N+ L YGPPGTGKT++AR A ++ +
Sbjct: 194 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 253
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 254 LAGPQLVQMFIGDGAKLVRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 312
Query: 474 ALNALLFRTGDQ-SRDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G Q + + ++ ATNR LD A+ + R+D IEFP+P EE R
Sbjct: 313 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 365
Score = 53 (23.7 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 181 EESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRV 219
E+ I +E + STEE +Q + RL + E ++ E +RV
Sbjct: 28 EQDGIGEEVLKMSTEEIVQ-RTRLLDSEIKIMKSEVLRV 65
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 191 (72.3 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 58/173 (33%), Positives = 87/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F N+ L YGPPGTGKT++AR A ++ +
Sbjct: 194 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 253
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 254 LAGPQLVQMFIGDGAKLVRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 312
Query: 474 ALNALLFRTGDQ-SRDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G Q + + ++ ATNR LD A+ + R+D IEFP+P EE R
Sbjct: 313 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 365
Score = 53 (23.7 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 181 EESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRV 219
E+ I +E + STEE +Q + RL + E ++ E +RV
Sbjct: 28 EQDGIGEEVLKMSTEEIVQ-RTRLLDSEIKIMKSEVLRV 65
>UNIPROTKB|Q5ZK92 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0043014
"alpha-tubulin binding" evidence=ISS] [GO:0048487 "beta-tubulin
binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 HSSP:O75351
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
OrthoDB:EOG4NZTTF EMBL:EU849599 EMBL:EU849600 EMBL:AJ720192
IPI:IPI00599182 IPI:IPI00923811 RefSeq:NP_001026232.1
UniGene:Gga.21964 ProteinModelPortal:Q5ZK92 SMR:Q5ZK92
STRING:Q5ZK92 GeneID:421481 KEGG:gga:421481 InParanoid:Q5ZK92
NextBio:20824244 Uniprot:Q5ZK92
Length = 613
Score = 196 (74.1 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 48/144 (33%), Positives = 78/144 (54%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAK 442
+AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A+
Sbjct: 369 RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVAR 428
Query: 443 KSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQS--RDIVLVL-ATNRPG 499
+ + ++ FIDE D+ LCER ++R L+ G QS D +LV+ ATNRP
Sbjct: 429 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQ 487
Query: 500 DLDSAITDRIDEVIEFPLPREEER 523
+LD A+ R + + LP EE R
Sbjct: 488 ELDDAVLRRFTKRVYVSLPNEETR 511
Score = 53 (23.7 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLM 587
+L KQ +T K+L+ + AR T+G+SG ++ L+
Sbjct: 517 NLLSKQGSPLTQKELA-----QLARMTDGYSGSDLTALV 550
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 191 (72.3 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 58/173 (33%), Positives = 87/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F N+ L YGPPGTGKT++AR A ++ +
Sbjct: 198 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 257
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 258 LAGPQLVQMFIGDGAKLVRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 316
Query: 474 ALNALLFRTGDQ-SRDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G Q + + ++ ATNR LD A+ + R+D IEFP+P EE R
Sbjct: 317 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 369
Score = 53 (23.7 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 181 EESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRV 219
E+ I +E + STEE +Q + RL + E ++ E +RV
Sbjct: 32 EQDGIGEEVLKMSTEEIVQ-RTRLLDSEIKIMKSEVLRV 69
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 191 (72.3 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 58/173 (33%), Positives = 87/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F N+ L YGPPGTGKT++AR A ++ +
Sbjct: 179 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 238
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 239 LAGPQLVQMFIGDGAKLVRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 297
Query: 474 ALNALLFRTGDQ-SRDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G Q + + ++ ATNR LD A+ + R+D IEFP+P EE R
Sbjct: 298 MLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 350
Score = 52 (23.4 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 173 NTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRV 219
N V + E I +E + STEE +Q + RL + E ++ E +RV
Sbjct: 5 NDRSVWDEVEDGIGEEVLKMSTEEIVQ-RTRLLDSEIKIMKSEVLRV 50
>UNIPROTKB|E1C6S3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
GeneTree:ENSGT00570000078874 IPI:IPI00599182 EMBL:AADN02011792
EMBL:AADN02011793 Ensembl:ENSGALT00000017279 ArrayExpress:E1C6S3
Uniprot:E1C6S3
Length = 592
Score = 196 (74.1 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 48/144 (33%), Positives = 78/144 (54%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAK 442
+AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A+
Sbjct: 348 RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVAR 407
Query: 443 KSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQS--RDIVLVL-ATNRPG 499
+ + ++ FIDE D+ LCER ++R L+ G QS D +LV+ ATNRP
Sbjct: 408 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQ 466
Query: 500 DLDSAITDRIDEVIEFPLPREEER 523
+LD A+ R + + LP EE R
Sbjct: 467 ELDDAVLRRFTKRVYVSLPNEETR 490
Score = 52 (23.4 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
+L KQ +T K+L+ + AR T+G+SG ++ L
Sbjct: 496 NLLSKQGSPLTQKELA-----QLARMTDGYSGSDLTAL 528
>UNIPROTKB|Q6AZT2 [details] [associations]
symbol:spast "Spastin" species:8355 "Xenopus laevis"
[GO:0001578 "microtubule bundle formation" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
GO:GO:0048487 GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
EMBL:BC077358 RefSeq:NP_001086725.1 UniGene:Xl.32426
ProteinModelPortal:Q6AZT2 SMR:Q6AZT2 GeneID:446560 KEGG:xla:446560
Xenbase:XB-GENE-947846 Uniprot:Q6AZT2
Length = 600
Score = 197 (74.4 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 49/144 (34%), Positives = 78/144 (54%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAK 442
+AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A+
Sbjct: 356 RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVAR 415
Query: 443 KSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR--DIVLVL-ATNRPG 499
+ + ++ FIDE D+ LCER ++R L+ G QS D VLV+ ATNRP
Sbjct: 416 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQ 474
Query: 500 DLDSAITDRIDEVIEFPLPREEER 523
+LD A+ R + + LP EE R
Sbjct: 475 ELDDAVLRRFTKRVYVALPNEETR 498
Score = 51 (23.0 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 563 LSDNVIQEAARKTEGFSGREIAKL 586
LS+ + + +R TEG+SG +I L
Sbjct: 513 LSEKELTQLSRLTEGYSGSDITAL 536
>UNIPROTKB|F1NCJ3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001578 "microtubule
bundle formation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0007109 "cytokinesis, completion of separation" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005768
GO:GO:0051260 Pfam:PF04212 GO:GO:0006888 GO:GO:0030496
GO:GO:0007109 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0034214 GeneTree:ENSGT00570000078874
OMA:HKSTPKT EMBL:AADN02011792 EMBL:AADN02011793 IPI:IPI00821045
Ensembl:ENSGALT00000037930 ArrayExpress:F1NCJ3 Uniprot:F1NCJ3
Length = 600
Score = 196 (74.1 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 48/144 (33%), Positives = 78/144 (54%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAK 442
+AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A+
Sbjct: 356 RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVAR 415
Query: 443 KSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQS--RDIVLVL-ATNRPG 499
+ + ++ FIDE D+ LCER ++R L+ G QS D +LV+ ATNRP
Sbjct: 416 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQ 474
Query: 500 DLDSAITDRIDEVIEFPLPREEER 523
+LD A+ R + + LP EE R
Sbjct: 475 ELDDAVLRRFTKRVYVSLPNEETR 498
Score = 52 (23.4 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
+L KQ +T K+L+ + AR T+G+SG ++ L
Sbjct: 504 NLLSKQGSPLTQKELA-----QLARMTDGYSGSDLTAL 536
>UNIPROTKB|E2RA71 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 Pfam:PF04212 GO:GO:0017111 InterPro:IPR015415
Pfam:PF09336 SMART:SM00745 GeneTree:ENSGT00550000074466 OMA:FTGKRIP
EMBL:AAEX03004108 Ensembl:ENSCAFT00000032306 NextBio:20854819
Uniprot:E2RA71
Length = 437
Score = 179 (68.1 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 60/190 (31%), Positives = 94/190 (49%)
Query: 339 IRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGT 398
IR AG G EA+K + ++ P + HL + P+R +L +GPPGT
Sbjct: 124 IRWNDVAGLEGAKEALK---EAVILPI---KFPHLFTGK------RTPWRGILLFGPPGT 171
Query: 399 GKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDWAKKSKKGLLLFIDEA 455
GK+ +A+ +A ++ + ++ D+ LG ++ + +F+ A++ K ++ FIDE
Sbjct: 172 GKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELARQHKPSII-FIDEV 229
Query: 456 DAFLCERNSIHMSEAQRSALNALLFRTG-DQSRDIVLVL-ATNRPGDLDSAITDRIDEVI 513
D+ RN A+R L+ G + D LVL ATN P LDSAI R ++ I
Sbjct: 230 DSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRI 289
Query: 514 EFPLPREEER 523
PLP E R
Sbjct: 290 YIPLPEEAAR 299
Score = 65 (27.9 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIA 584
T +L+D I E ARKTEG+SG +I+
Sbjct: 310 TPHNLTDANIHELARKTEGYSGADIS 335
>UNIPROTKB|Q9UN37 [details] [associations]
symbol:VPS4A "Vacuolar protein sorting-associated protein
4A" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016192 "vesicle-mediated transport" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0016197 "endosomal transport"
evidence=IMP;TAS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0042623 "ATPase activity, coupled" evidence=NAS]
[GO:0000910 "cytokinesis" evidence=IDA] [GO:0030496 "midbody"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000815 "ESCRT III complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] Reactome:REACT_11123 InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0048471 GO:GO:0016192 GO:GO:0031902
GO:GO:0015031 GO:GO:0016197 GO:GO:0007049 GO:GO:0000910
Pfam:PF04212 eggNOG:COG0464 GO:GO:0030496 EMBL:CH471092
InterPro:IPR015415 Pfam:PF09336 GO:GO:0016044 HOVERGEN:HBG057074
GO:GO:0042623 SMART:SM00745 PDB:2JQ9 PDBsum:2JQ9 PDB:2K3W
PDBsum:2K3W HOGENOM:HOG000225146 EMBL:AF255952 EMBL:AF282903
EMBL:AF132747 EMBL:AF159063 EMBL:AF112215 EMBL:AK315026
EMBL:BC047932 EMBL:AF155740 IPI:IPI00411356 RefSeq:NP_037377.1
UniGene:Hs.128420 PDB:1YXR PDBsum:1YXR ProteinModelPortal:Q9UN37
SMR:Q9UN37 IntAct:Q9UN37 STRING:Q9UN37 PhosphoSite:Q9UN37
DMDM:62511240 PaxDb:Q9UN37 PRIDE:Q9UN37 DNASU:27183
Ensembl:ENST00000254950 GeneID:27183 KEGG:hsa:27183 UCSC:uc002eww.3
CTD:27183 GeneCards:GC16P069335 HGNC:HGNC:13488 HPA:CAB018751
MIM:609982 neXtProt:NX_Q9UN37 PharmGKB:PA38362 InParanoid:Q9UN37
KO:K12196 OMA:FTGKRIP OrthoDB:EOG4G1MGD ChiTaRS:VPS4A
EvolutionaryTrace:Q9UN37 GenomeRNAi:27183 NextBio:50017
ArrayExpress:Q9UN37 Bgee:Q9UN37 CleanEx:HS_VPS4A
Genevestigator:Q9UN37 GermOnline:ENSG00000132612 Uniprot:Q9UN37
Length = 437
Score = 179 (68.1 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 60/190 (31%), Positives = 94/190 (49%)
Query: 339 IRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGT 398
IR AG G EA+K + ++ P + HL + P+R +L +GPPGT
Sbjct: 124 IRWNDVAGLEGAKEALK---EAVILPI---KFPHLFTGK------RTPWRGILLFGPPGT 171
Query: 399 GKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDWAKKSKKGLLLFIDEA 455
GK+ +A+ +A ++ + ++ D+ LG ++ + +F+ A++ K ++ FIDE
Sbjct: 172 GKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELARQHKPSII-FIDEV 229
Query: 456 DAFLCERNSIHMSEAQRSALNALLFRTG-DQSRDIVLVL-ATNRPGDLDSAITDRIDEVI 513
D+ RN A+R L+ G + D LVL ATN P LDSAI R ++ I
Sbjct: 230 DSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRI 289
Query: 514 EFPLPREEER 523
PLP E R
Sbjct: 290 YIPLPEEAAR 299
Score = 65 (27.9 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIA 584
T +L+D I E ARKTEG+SG +I+
Sbjct: 310 TPHNLTDANIHELARKTEGYSGADIS 335
>MGI|MGI:1890520 [details] [associations]
symbol:Vps4a "vacuolar protein sorting 4a (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017048 "Rho GTPase binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030496
"midbody" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO;IDA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1890520 GO:GO:0005524 GO:GO:0048471
GO:GO:0051301 GO:GO:0016192 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
CTD:27183 KO:K12196 OrthoDB:EOG4G1MGD EMBL:AF530161 EMBL:AK047821
EMBL:AK159117 EMBL:BC018368 IPI:IPI00312172 RefSeq:NP_569053.1
UniGene:Mm.236004 ProteinModelPortal:Q8VEJ9 SMR:Q8VEJ9
STRING:Q8VEJ9 PhosphoSite:Q8VEJ9 PaxDb:Q8VEJ9 PRIDE:Q8VEJ9
Ensembl:ENSMUST00000034388 GeneID:116733 KEGG:mmu:116733
UCSC:uc009ngv.1 InParanoid:Q8VEJ9 OMA:VRWNDVA NextBio:369058
Bgee:Q8VEJ9 CleanEx:MM_VPS4A Genevestigator:Q8VEJ9
GermOnline:ENSMUSG00000031913 Uniprot:Q8VEJ9
Length = 437
Score = 179 (68.1 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 60/190 (31%), Positives = 94/190 (49%)
Query: 339 IRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGT 398
IR AG G EA+K + ++ P + HL + P+R +L +GPPGT
Sbjct: 124 IRWNDVAGLEGAKEALK---EAVILPI---KFPHLFTGK------RTPWRGILLFGPPGT 171
Query: 399 GKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDWAKKSKKGLLLFIDEA 455
GK+ +A+ +A ++ + ++ D+ LG ++ + +F+ A++ K ++ FIDE
Sbjct: 172 GKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELARQHKPSII-FIDEV 229
Query: 456 DAFLCERNSIHMSEAQRSALNALLFRTG-DQSRDIVLVL-ATNRPGDLDSAITDRIDEVI 513
D+ RN A+R L+ G + D LVL ATN P LDSAI R ++ I
Sbjct: 230 DSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRI 289
Query: 514 EFPLPREEER 523
PLP E R
Sbjct: 290 YIPLPEEAAR 299
Score = 65 (27.9 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIA 584
T +L+D I E ARKTEG+SG +I+
Sbjct: 310 TPHNLTDANIHELARKTEGYSGADIS 335
>RGD|628810 [details] [associations]
symbol:Vps4a "vacuolar protein sorting 4 homolog A (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000910
"cytokinesis" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISO] [GO:0016197 "endosomal transport" evidence=IC;ISO]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030496
"midbody" evidence=ISO] [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0000815 "ESCRT III complex" evidence=ISO] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:628810 GO:GO:0005524
GO:GO:0051301 GO:GO:0031902 GO:GO:0015031 GO:GO:0016197
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 HSSP:O75351
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
CTD:27183 KO:K12196 OrthoDB:EOG4G1MGD EMBL:AB076398 IPI:IPI00204016
RefSeq:NP_663711.1 UniGene:Rn.12477 ProteinModelPortal:Q793F9
SMR:Q793F9 STRING:Q793F9 PhosphoSite:Q793F9 PRIDE:Q793F9
Ensembl:ENSRNOT00000027607 GeneID:246772 KEGG:rno:246772
UCSC:RGD:628810 NextBio:623855 ArrayExpress:Q793F9
Genevestigator:Q793F9 Uniprot:Q793F9
Length = 437
Score = 179 (68.1 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 60/190 (31%), Positives = 94/190 (49%)
Query: 339 IRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGT 398
IR AG G EA+K + ++ P + HL + P+R +L +GPPGT
Sbjct: 124 IRWNDVAGLEGAKEALK---EAVILPI---KFPHLFTGK------RTPWRGILLFGPPGT 171
Query: 399 GKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDWAKKSKKGLLLFIDEA 455
GK+ +A+ +A ++ + ++ D+ LG ++ + +F+ A++ K ++ FIDE
Sbjct: 172 GKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELARQHKPSII-FIDEV 229
Query: 456 DAFLCERNSIHMSEAQRSALNALLFRTG-DQSRDIVLVL-ATNRPGDLDSAITDRIDEVI 513
D+ RN A+R L+ G + D LVL ATN P LDSAI R ++ I
Sbjct: 230 DSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRI 289
Query: 514 EFPLPREEER 523
PLP E R
Sbjct: 290 YIPLPEEAAR 299
Score = 65 (27.9 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIA 584
T +L+D I E ARKTEG+SG +I+
Sbjct: 310 TPHNLTDANIHELARKTEGYSGADIS 335
>UNIPROTKB|Q793F9 [details] [associations]
symbol:Vps4a "Vacuolar protein sorting-associated protein
4A" species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:628810 GO:GO:0005524 GO:GO:0051301 GO:GO:0031902
GO:GO:0015031 GO:GO:0016197 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0017111 HSSP:O75351 InterPro:IPR015415
Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 CTD:27183
KO:K12196 OrthoDB:EOG4G1MGD EMBL:AB076398 IPI:IPI00204016
RefSeq:NP_663711.1 UniGene:Rn.12477 ProteinModelPortal:Q793F9
SMR:Q793F9 STRING:Q793F9 PhosphoSite:Q793F9 PRIDE:Q793F9
Ensembl:ENSRNOT00000027607 GeneID:246772 KEGG:rno:246772
UCSC:RGD:628810 NextBio:623855 ArrayExpress:Q793F9
Genevestigator:Q793F9 Uniprot:Q793F9
Length = 437
Score = 179 (68.1 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 60/190 (31%), Positives = 94/190 (49%)
Query: 339 IRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGT 398
IR AG G EA+K + ++ P + HL + P+R +L +GPPGT
Sbjct: 124 IRWNDVAGLEGAKEALK---EAVILPI---KFPHLFTGK------RTPWRGILLFGPPGT 171
Query: 399 GKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDWAKKSKKGLLLFIDEA 455
GK+ +A+ +A ++ + ++ D+ LG ++ + +F+ A++ K ++ FIDE
Sbjct: 172 GKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELARQHKPSII-FIDEV 229
Query: 456 DAFLCERNSIHMSEAQRSALNALLFRTG-DQSRDIVLVL-ATNRPGDLDSAITDRIDEVI 513
D+ RN A+R L+ G + D LVL ATN P LDSAI R ++ I
Sbjct: 230 DSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRI 289
Query: 514 EFPLPREEER 523
PLP E R
Sbjct: 290 YIPLPEEAAR 299
Score = 65 (27.9 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIA 584
T +L+D I E ARKTEG+SG +I+
Sbjct: 310 TPHNLTDANIHELARKTEGYSGADIS 335
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 201 (75.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 46/165 (27%), Positives = 92/165 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPGTGKT++AR +A ++G + ++ G ++ + + ++ + + + F+ A+K+
Sbjct: 248 PPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 307
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSR-DIVLVLATNRPGDLD 502
++ FIDE D+ +R+ + E +R ++ LL G ++R ++V++ ATNRP +D
Sbjct: 308 SPSII-FIDEIDSIAPKRDKTN-GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSID 365
Query: 503 SAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSL 545
A+ R D ++ +P E R +D+ D ++
Sbjct: 366 PALRRFGRFDREVDIGVPDAEGRLEILRIHTKNMKLADDVDLEAI 410
Score = 190 (71.9 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 49/150 (32%), Positives = 82/150 (54%)
Query: 381 KIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFD 439
K AP + +LF+GPPGTGKT++A+ +A + ++ + G ++ + ++ + I +IFD
Sbjct: 516 KFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFD 575
Query: 440 WAKKSKKGLLLFIDEADAFLCERNSIH--MSEAQRSALNALLFRT-GDQSRDIVLVL-AT 495
A+ + ++F+DE D+ R H A +N LL G ++ V V+ AT
Sbjct: 576 KARAAAP-TVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGAT 634
Query: 496 NRPGDLDSAIT--DRIDEVIEFPLPREEER 523
NRP +D A+ R+D++I PLP E R
Sbjct: 635 NRPDQIDPALLRPGRLDQLIYVPLPDEPAR 664
Score = 50 (22.7 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 15/56 (26%), Positives = 33/56 (58%)
Query: 568 IQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIK 623
+ E A+ T GFSG +++ ++ ++A +A D + ++Q V K++E +++K
Sbjct: 683 LNEIAKITHGFSGADLSYIVQ--RSAKFAIKDSI-EAQ----VKINKIKEEKEKVK 731
Score = 49 (22.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 563 LSDNVIQEA-ARKTEGFSGREIAKL 586
L+D+V EA A +T GF G +IA L
Sbjct: 401 LADDVDLEAIASETHGFVGADIASL 425
Score = 44 (20.5 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQEESSIR 186
D +A KR +T+ E +RR ++L+ + + R
Sbjct: 318 DSIAPKRDKTNGEVERRVVSQLLTLMDGMKAR 349
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 201 (75.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 46/165 (27%), Positives = 92/165 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPGTGKT++AR +A ++G + ++ G ++ + + ++ + + + F+ A+K+
Sbjct: 248 PPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 307
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSR-DIVLVLATNRPGDLD 502
++ FIDE D+ +R+ + E +R ++ LL G ++R ++V++ ATNRP +D
Sbjct: 308 SPSII-FIDEIDSIAPKRDKTN-GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSID 365
Query: 503 SAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSL 545
A+ R D ++ +P E R +D+ D ++
Sbjct: 366 PALRRFGRFDREVDIGVPDAEGRLEILRIHTKNMKLADDVDLEAI 410
Score = 190 (71.9 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 49/150 (32%), Positives = 82/150 (54%)
Query: 381 KIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFD 439
K AP + +LF+GPPGTGKT++A+ +A + ++ + G ++ + ++ + I +IFD
Sbjct: 516 KFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFD 575
Query: 440 WAKKSKKGLLLFIDEADAFLCERNSIH--MSEAQRSALNALLFRT-GDQSRDIVLVL-AT 495
A+ + ++F+DE D+ R H A +N LL G ++ V V+ AT
Sbjct: 576 KARAAAP-TVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGAT 634
Query: 496 NRPGDLDSAIT--DRIDEVIEFPLPREEER 523
NRP +D A+ R+D++I PLP E R
Sbjct: 635 NRPDQIDPALLRPGRLDQLIYVPLPDEPAR 664
Score = 50 (22.7 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 15/56 (26%), Positives = 33/56 (58%)
Query: 568 IQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQRIK 623
+ E A+ T GFSG +++ ++ ++A +A D + ++Q V K++E +++K
Sbjct: 683 LNEIAKITHGFSGADLSYIVQ--RSAKFAIKDSI-EAQ----VKINKIKEEKEKVK 731
Score = 49 (22.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 563 LSDNVIQEA-ARKTEGFSGREIAKL 586
L+D+V EA A +T GF G +IA L
Sbjct: 401 LADDVDLEAIASETHGFVGADIASL 425
Score = 44 (20.5 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQEESSIR 186
D +A KR +T+ E +RR ++L+ + + R
Sbjct: 318 DSIAPKRDKTNGEVERRVVSQLLTLMDGMKAR 349
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 193 (73.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 51/145 (35%), Positives = 77/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 242 PPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMAR-T 300
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK ++F DE DA R + +E QR+ L + G D +I ++ ATNRP
Sbjct: 301 KKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNT 360
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID +EF LP E R
Sbjct: 361 LDPALLRPGRIDRKVEFSLPDLEGR 385
Score = 50 (22.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 21/91 (23%), Positives = 38/91 (41%)
Query: 159 RKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEK-ERAEIERETI 217
R+RL +H Q T+++K ES S + Q+ T+ E E + I
Sbjct: 88 RQRLGEEHPLQVARCTKIIKGNGESDETTTDNNNSGNSNSNSNQQSTDADEDDEDAKYVI 147
Query: 218 RVKAMAE-AEGRAHEAKLTE-DHNRRMLIER 246
+K +A+ G T+ + R+ ++R
Sbjct: 148 NLKQIAKFVVGLGERVSPTDIEEGMRVGVDR 178
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 191 (72.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 58/173 (33%), Positives = 87/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F N+ L YGPPGTGKT++AR A ++ +
Sbjct: 175 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 234
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 235 LAGPQLVQMFIGDGAKLVRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 293
Query: 474 ALNALLFRTGDQ-SRDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G Q + + ++ ATNR LD A+ + R+D IEFP+P EE R
Sbjct: 294 MLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 346
Score = 49 (22.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 181 EESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRV 219
E + +E + STEE IQ + RL + E ++ E +RV
Sbjct: 9 EADGLGEEVLKMSTEEIIQ-RTRLLDSEIKIMKSEVLRV 46
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 197 (74.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 54/164 (32%), Positives = 81/164 (49%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPGTGKTM+A+ +A + + + G + LG + + ++F AK+
Sbjct: 188 PPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 246
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA R E QR + L G DQ+ ++ +++ATNR
Sbjct: 247 NAPAII-FIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRAD 305
Query: 500 DLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGD 541
LD A+ R+D IEFPLP ++ SDE D
Sbjct: 306 TLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVD 349
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 199 (75.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 57/173 (32%), Positives = 88/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPF--------RNMLFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++I+ L +A +H+ F + +L +GPPGTGKT++AR A ++ +
Sbjct: 191 LDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLK 250
Query: 418 MTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + + + F+ AK+ K ++FIDE DA +R +S E QR+
Sbjct: 251 LAGPQLVQMFIGDGAKMVRDAFNLAKE-KAPAIIFIDELDAIGTKRFDSELSGDREVQRT 309
Query: 474 ALNALLFRTGDQSRDIVLVLA-TNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G + D V V+A TNRP LD A+ + R+D IE P P EE R
Sbjct: 310 MLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESR 362
Score = 41 (19.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 556 QKITI-KDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFRE 609
+K+ + KD++ +E AR T+ F+G ++ + R +D + F E
Sbjct: 371 RKMNVHKDVN---FEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFVE 422
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 199 (75.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 57/173 (32%), Positives = 88/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPF--------RNMLFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++I+ L +A +H+ F + +L +GPPGTGKT++AR A ++ +
Sbjct: 191 LDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLK 250
Query: 418 MTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + + + F+ AK+ K ++FIDE DA +R +S E QR+
Sbjct: 251 LAGPQLVQMFIGDGAKMVRDAFNLAKE-KAPAIIFIDELDAIGTKRFDSELSGDREVQRT 309
Query: 474 ALNALLFRTGDQSRDIVLVLA-TNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G + D V V+A TNRP LD A+ + R+D IE P P EE R
Sbjct: 310 MLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESR 362
Score = 41 (19.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 556 QKITI-KDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFRE 609
+K+ + KD++ +E AR T+ F+G ++ + R +D + F E
Sbjct: 371 RKMNVHKDVN---FEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFVE 422
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 204 (76.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 47/138 (34%), Positives = 81/138 (58%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVLA-TNRPGDLD 502
++ FIDE DA +R H E +R ++ LL G + R V+V+A TNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D ++ +P
Sbjct: 355 PALRRFGRFDREVDIGIP 372
Score = 189 (71.6 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 54/184 (29%), Positives = 97/184 (52%)
Query: 349 GPVEAIKNN-GDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREI 407
G +E +K D++ +P ++H K K P + +LFYGPPG GKT++A+ I
Sbjct: 480 GGLEDVKRELQDLVQYP-----VEHPDKFL---KFGMTPSKGVLFYGPPGCGKTLLAKAI 531
Query: 408 ARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIH 466
A + ++ + G ++ + ++ + EIFD A+++ +LF DE D+ R +
Sbjct: 532 ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFDELDSIAKARGG-N 589
Query: 467 MSEAQRSA---LNALLFRTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPR 519
+ + +A +N +L S +++ ++ ATNRP +D AI R+D++I PLP
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 520 EEER 523
E+ R
Sbjct: 650 EKSR 653
Score = 46 (21.3 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DEL A KR +T E +RR ++L+ +
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 332
Query: 181 E 181
+
Sbjct: 333 D 333
Score = 45 (20.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLM--ASVQA 592
L+D+V +++ A +T G G ++A L A++QA
Sbjct: 390 LADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 38 (18.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T GFSG ++ ++
Sbjct: 676 AKMTNGFSGADLTEI 690
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 204 (76.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 47/138 (34%), Positives = 81/138 (58%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVLA-TNRPGDLD 502
++ FIDE DA +R H E +R ++ LL G + R V+V+A TNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D ++ +P
Sbjct: 355 PALRRFGRFDREVDIGIP 372
Score = 187 (70.9 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 54/183 (29%), Positives = 95/183 (51%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L +Q ++H K K P + +LFYGPPG GKT++A+ IA
Sbjct: 480 GGLEDVKRE----LQELVQYPVEHPDKFL---KFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHM 467
+ ++ + G ++ + ++ + EIFD A+++ +LF DE D+ R ++
Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFDELDSIAKARGG-NI 590
Query: 468 SEAQRSA---LNALLFRTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPRE 520
+ +A +N +L S +++ ++ ATNRP +D AI R+D++I PLP E
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 521 EER 523
+ R
Sbjct: 651 KSR 653
Score = 46 (21.3 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DEL A KR +T E +RR ++L+ +
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 332
Query: 181 E 181
+
Sbjct: 333 D 333
Score = 45 (20.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLM--ASVQA 592
L+D+V +++ A +T G G ++A L A++QA
Sbjct: 390 LADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 38 (18.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T GFSG ++ ++
Sbjct: 676 AKMTNGFSGADLTEI 690
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 204 (76.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 47/138 (34%), Positives = 81/138 (58%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVLA-TNRPGDLD 502
++ FIDE DA +R H E +R ++ LL G + R V+V+A TNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D ++ +P
Sbjct: 355 PALRRFGRFDREVDIGIP 372
Score = 187 (70.9 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 54/183 (29%), Positives = 95/183 (51%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L +Q ++H K K P + +LFYGPPG GKT++A+ IA
Sbjct: 480 GGLEDVKRE----LQELVQYPVEHPDKFL---KFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHM 467
+ ++ + G ++ + ++ + EIFD A+++ +LF DE D+ R ++
Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFDELDSIAKARGG-NI 590
Query: 468 SEAQRSA---LNALLFRTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPRE 520
+ +A +N +L S +++ ++ ATNRP +D AI R+D++I PLP E
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 521 EER 523
+ R
Sbjct: 651 KSR 653
Score = 46 (21.3 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DEL A KR +T E +RR ++L+ +
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 332
Query: 181 E 181
+
Sbjct: 333 D 333
Score = 45 (20.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLM--ASVQA 592
L+D+V +++ A +T G G ++A L A++QA
Sbjct: 390 LADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 38 (18.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T GFSG ++ ++
Sbjct: 676 AKMTNGFSGADLTEI 690
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 204 (76.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 47/138 (34%), Positives = 81/138 (58%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVLA-TNRPGDLD 502
++ FIDE DA +R H E +R ++ LL G + R V+V+A TNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D ++ +P
Sbjct: 355 PALRRFGRFDREVDIGIP 372
Score = 187 (70.9 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 54/183 (29%), Positives = 95/183 (51%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L +Q ++H K K P + +LFYGPPG GKT++A+ IA
Sbjct: 480 GGLEDVKRE----LQELVQYPVEHPDKFL---KFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHM 467
+ ++ + G ++ + ++ + EIFD A+++ +LF DE D+ R ++
Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFDELDSIAKARGG-NI 590
Query: 468 SEAQRSA---LNALLFRTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPRE 520
+ +A +N +L S +++ ++ ATNRP +D AI R+D++I PLP E
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 521 EER 523
+ R
Sbjct: 651 KSR 653
Score = 46 (21.3 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DEL A KR +T E +RR ++L+ +
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 332
Query: 181 E 181
+
Sbjct: 333 D 333
Score = 45 (20.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLM--ASVQA 592
L+D+V +++ A +T G G ++A L A++QA
Sbjct: 390 LADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 38 (18.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T GFSG ++ ++
Sbjct: 676 AKMTNGFSGADLTEI 690
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 204 (76.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 47/138 (34%), Positives = 81/138 (58%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVLA-TNRPGDLD 502
++ FIDE DA +R H E +R ++ LL G + R V+V+A TNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D ++ +P
Sbjct: 355 PALRRFGRFDREVDIGIP 372
Score = 187 (70.9 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 54/183 (29%), Positives = 95/183 (51%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L +Q ++H K K P + +LFYGPPG GKT++A+ IA
Sbjct: 480 GGLEDVKRE----LQELVQYPVEHPDKFL---KFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHM 467
+ ++ + G ++ + ++ + EIFD A+++ +LF DE D+ R ++
Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFDELDSIAKARGG-NI 590
Query: 468 SEAQRSA---LNALLFRTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPRE 520
+ +A +N +L S +++ ++ ATNRP +D AI R+D++I PLP E
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 521 EER 523
+ R
Sbjct: 651 KSR 653
Score = 46 (21.3 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DEL A KR +T E +RR ++L+ +
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 332
Query: 181 E 181
+
Sbjct: 333 D 333
Score = 45 (20.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLM--ASVQA 592
L+D+V +++ A +T G G ++A L A++QA
Sbjct: 390 LADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 38 (18.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T GFSG ++ ++
Sbjct: 676 AKMTNGFSGADLTEI 690
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 204 (76.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 47/138 (34%), Positives = 81/138 (58%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVLA-TNRPGDLD 502
++ FIDE DA +R H E +R ++ LL G + R V+V+A TNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D ++ +P
Sbjct: 355 PALRRFGRFDREVDIGIP 372
Score = 187 (70.9 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 54/183 (29%), Positives = 95/183 (51%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L +Q ++H K K P + +LFYGPPG GKT++A+ IA
Sbjct: 480 GGLEDVKRE----LQELVQYPVEHPDKFL---KFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHM 467
+ ++ + G ++ + ++ + EIFD A+++ +LF DE D+ R ++
Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFDELDSIAKARGG-NI 590
Query: 468 SEAQRSA---LNALLFRTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPRE 520
+ +A +N +L S +++ ++ ATNRP +D AI R+D++I PLP E
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 521 EER 523
+ R
Sbjct: 651 KSR 653
Score = 46 (21.3 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DEL A KR +T E +RR ++L+ +
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 332
Query: 181 E 181
+
Sbjct: 333 D 333
Score = 45 (20.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLM--ASVQA 592
L+D+V +++ A +T G G ++A L A++QA
Sbjct: 390 LADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 38 (18.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T GFSG ++ ++
Sbjct: 676 AKMTNGFSGADLTEI 690
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 204 (76.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 47/138 (34%), Positives = 81/138 (58%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVLA-TNRPGDLD 502
++ FIDE DA +R H E +R ++ LL G + R V+V+A TNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D ++ +P
Sbjct: 355 PALRRFGRFDREVDIGIP 372
Score = 186 (70.5 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 47/151 (31%), Positives = 83/151 (54%)
Query: 381 KIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFD 439
K P + +LFYGPPG GKT++A+ IA + ++ + G ++ + ++ + EIFD
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 440 WAKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSA---LNALLFRTGDQS--RDIVLVLA 494
A+++ +LF DE D+ R ++ + +A +N +L S +++ ++ A
Sbjct: 565 KARQAAP-CVLFFDELDSIAKARGG-NVGDGGGAADRVINQILTEMDGMSSKKNVFIIGA 622
Query: 495 TNRPGDLDSAIT--DRIDEVIEFPLPREEER 523
TNRP +D AI R+D++I PLP E+ R
Sbjct: 623 TNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Score = 46 (21.3 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DEL A KR +T E +RR ++L+ +
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 332
Query: 181 E 181
+
Sbjct: 333 D 333
Score = 45 (20.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLM--ASVQA 592
L+D+V +++ A +T G G ++A L A++QA
Sbjct: 390 LADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 38 (18.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T GFSG ++ ++
Sbjct: 676 AKMTNGFSGADLTEI 690
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 204 (76.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 47/138 (34%), Positives = 81/138 (58%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVLA-TNRPGDLD 502
++ FIDE DA +R H E +R ++ LL G + R V+V+A TNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D ++ +P
Sbjct: 355 PALRRFGRFDREVDIGIP 372
Score = 187 (70.9 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 54/183 (29%), Positives = 95/183 (51%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L +Q ++H K K P + +LFYGPPG GKT++A+ IA
Sbjct: 480 GGLEDVKRE----LQELVQYPVEHPDKFL---KFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHM 467
+ ++ + G ++ + ++ + EIFD A+++ +LF DE D+ R ++
Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFDELDSIAKARGG-NI 590
Query: 468 SEAQRSA---LNALLFRTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPRE 520
+ +A +N +L S +++ ++ ATNRP +D AI R+D++I PLP E
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 521 EER 523
+ R
Sbjct: 651 KSR 653
Score = 46 (21.3 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DEL A KR +T E +RR ++L+ +
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 332
Query: 181 E 181
+
Sbjct: 333 D 333
Score = 45 (20.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLM--ASVQA 592
L+D+V +++ A +T G G ++A L A++QA
Sbjct: 390 LADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 45 (20.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 550 LFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
+ K +K + D ++ A+ T GFSG ++ ++
Sbjct: 656 ILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEI 692
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 197 (74.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 53/146 (36%), Positives = 78/146 (53%)
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKK 443
AP + ++ YG PGTGKT++A+ +A + + TG D V + + +IF AK+
Sbjct: 216 AP-KGVILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKE 274
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R +S E QR+ L L G +SR D+ +++ATNR
Sbjct: 275 QAPSIV-FIDEIDAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRID 333
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IE P P E+ R
Sbjct: 334 SLDPALIRPGRIDRKIELPKPDEKTR 359
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 204 (76.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 47/138 (34%), Positives = 81/138 (58%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 253 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 312
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVLA-TNRPGDLD 502
++ FIDE DA +R H E +R ++ LL G + R V+V+A TNRP +D
Sbjct: 313 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 370
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D ++ +P
Sbjct: 371 PALRRFGRFDREVDIGIP 388
Score = 187 (70.9 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 54/183 (29%), Positives = 95/183 (51%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L +Q ++H K K P + +LFYGPPG GKT++A+ IA
Sbjct: 496 GGLEDVKRE----LQELVQYPVEHPDKFL---KFGMTPSKGVLFYGPPGCGKTLLAKAIA 548
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHM 467
+ ++ + G ++ + ++ + EIFD A+++ +LF DE D+ R ++
Sbjct: 549 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFDELDSIAKARGG-NI 606
Query: 468 SEAQRSA---LNALLFRTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPRE 520
+ +A +N +L S +++ ++ ATNRP +D AI R+D++I PLP E
Sbjct: 607 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 666
Query: 521 EER 523
+ R
Sbjct: 667 KSR 669
Score = 46 (21.3 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DEL A KR +T E +RR ++L+ +
Sbjct: 289 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 348
Query: 181 E 181
+
Sbjct: 349 D 349
Score = 45 (20.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLM--ASVQA 592
L+D+V +++ A +T G G ++A L A++QA
Sbjct: 406 LADDVDLEQVANETHGHVGADLAALCSEAALQA 438
Score = 38 (18.4 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T GFSG ++ ++
Sbjct: 692 AKMTNGFSGADLTEI 706
>UNIPROTKB|G3X8E2 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0048471 Pfam:PF04212 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
GeneTree:ENSGT00550000074466 OMA:VRWNDVA EMBL:DAAA02046699
Ensembl:ENSBTAT00000065503 Uniprot:G3X8E2
Length = 437
Score = 179 (68.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 60/190 (31%), Positives = 94/190 (49%)
Query: 339 IRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGT 398
IR AG G EA+K + ++ P + HL + P+R +L +GPPGT
Sbjct: 124 IRWNDVAGLEGAKEALK---EAVILPI---KFPHLFTGK------RTPWRGILLFGPPGT 171
Query: 399 GKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDWAKKSKKGLLLFIDEA 455
GK+ +A+ +A ++ + ++ D+ LG ++ + +F+ A++ K ++ FIDE
Sbjct: 172 GKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELARQHKPSII-FIDEV 229
Query: 456 DAFLCERNSIHMSEAQRSALNALLFRTG-DQSRDIVLVL-ATNRPGDLDSAITDRIDEVI 513
D+ RN A+R L+ G + D LVL ATN P LDSAI R ++ I
Sbjct: 230 DSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRI 289
Query: 514 EFPLPREEER 523
PLP E R
Sbjct: 290 YIPLPEEAAR 299
Score = 62 (26.9 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIAKLM 587
T +L++ I E ARKTEG+SG +I+ ++
Sbjct: 310 TPHNLTEANIHELARKTEGYSGADISVIV 338
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 194 (73.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 59/194 (30%), Positives = 94/194 (48%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPG GKTM+A+ +A + + + G + LG + + ++F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G DQ+ ++ +++ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 500 DLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQK 557
LD A+ R+D IEFPLP ++ S+E D + + K
Sbjct: 316 TLDPALLCPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLED------YVARPDK 369
Query: 558 ITIKDLSDNVIQEA 571
I+ D++ ++ QEA
Sbjct: 370 ISGADIN-SICQEA 382
Score = 44 (20.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEA 232
K+Q+E + Q EE I+ +Q+ +KE + E R++++ G+ EA
Sbjct: 46 KLQQELEFLEVQ-----EEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEA 95
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 197 (74.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 62/200 (31%), Positives = 98/200 (49%)
Query: 381 KIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIF 438
KI P +L YGPPGTGKTM+ + +A ++ + + + G + LG + + ++F
Sbjct: 166 KIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLG-EGPRMVRDVF 224
Query: 439 DWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLA 494
A+++ ++ FIDE DA +R E QR L L G D+S ++ +++A
Sbjct: 225 RLARENSPSII-FIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMA 283
Query: 495 TNRPGDLDSAIT--DRIDEVIEFPLP-REEERFXXXXXXXXXXXCSDEGDSSSLKWGHLF 551
TNR LD A+ R+D IEFPLP R+++R SD S F
Sbjct: 284 TNRADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIES-------F 336
Query: 552 KKQQQKITIKDLSDNVIQEA 571
+ KI+ D++ + QEA
Sbjct: 337 VVRTDKISAADIAA-IAQEA 355
Score = 39 (18.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 180 QEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVK 220
+E+ IR + ++ + + Q+ ++E ++RE IR K
Sbjct: 10 EEDYYIRLKNLKKQIDI-LNIQEDYIKEEHKNLKRELIRSK 49
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 197 (74.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 62/200 (31%), Positives = 98/200 (49%)
Query: 381 KIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIF 438
KI P +L YGPPGTGKTM+ + +A ++ + + + G + LG + + ++F
Sbjct: 166 KIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLG-EGPRMVRDVF 224
Query: 439 DWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLA 494
A+++ ++ FIDE DA +R E QR L L G D+S ++ +++A
Sbjct: 225 RLARENSPSII-FIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMA 283
Query: 495 TNRPGDLDSAIT--DRIDEVIEFPLP-REEERFXXXXXXXXXXXCSDEGDSSSLKWGHLF 551
TNR LD A+ R+D IEFPLP R+++R SD S F
Sbjct: 284 TNRADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIES-------F 336
Query: 552 KKQQQKITIKDLSDNVIQEA 571
+ KI+ D++ + QEA
Sbjct: 337 VVRTDKISAADIAA-IAQEA 355
Score = 39 (18.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 180 QEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVK 220
+E+ IR + ++ + + Q+ ++E ++RE IR K
Sbjct: 10 EEDYYIRLKNLKKQIDI-LNIQEDYIKEEHKNLKRELIRSK 49
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 174 (66.3 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 50/145 (34%), Positives = 76/145 (52%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVA-PLGAQAVTKIHEIFDWAKKS 444
P +L +GPPG GKT+VA+ +A S ++ + G ++ ++ + ++F AK S
Sbjct: 538 PSAGILLWGPPGCGKTLVAKAVANASKANFISIKGPELLNKYVGESEYNVRQLFSRAKSS 597
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFR---TGDQSRDIVLVLATNRPGDL 501
+LF DE DA + R+ MS A +NALL GD+ + I ++ ATNRP +
Sbjct: 598 AP-CILFFDELDALVPTRD-FTMSGATSRVVNALLTELDGVGDR-QGIYVIGATNRPDSI 654
Query: 502 DSAIT--DRIDEVIEFPLPREEERF 524
D AI R+ I LP E+RF
Sbjct: 655 DEAIRRPGRLGTDIYVGLPTPEDRF 679
Score = 143 (55.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 45/167 (26%), Positives = 75/167 (44%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P +L +GP GTGKT V R +A + ++ V+ + ++ I E FD A +
Sbjct: 230 PQAAILLHGPSGTGKTAVVRALADTLQCAFVPVSATSLVSGISGESEKNIREAFDEAIRL 289
Query: 445 KKGLLLFIDEADAFLCERNS------IHMSEAQRSALNALLFRTGDQSRDIVLVLATNRP 498
LLF+DE D + + + MS L+ ++ R R++V++ ATNRP
Sbjct: 290 AP-CLLFLDEVDVVAGKMDGAQKAMEVRMSSEISQGLDKIV-RCTSPGRNVVVIAATNRP 347
Query: 499 GDLDSAITDRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSL 545
++ + R E +E +P E R SD+ D ++L
Sbjct: 348 DSIEPTVRRRFQE-LEMSMPDEAARESILRTMTRNKRLSDDVDFTAL 393
Score = 65 (27.9 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 328 SGLLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPF 387
S +SQ ++K++R TS G V A N D I P+++RR Q L + + ++
Sbjct: 318 SSEISQGLDKIVRC-TSPGRNVVVIAATNRPDSI-EPTVRRRFQELEMSMPDEAARESIL 375
Query: 388 RNM 390
R M
Sbjct: 376 RTM 378
Score = 52 (23.4 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 26/94 (27%), Positives = 41/94 (43%)
Query: 160 KRLQTDHEAQRRHNTELVKMQEE-----SSIRKEQARRSTEEQIQAQQRLT-EKERAEIE 213
K+L++D E RR + + E SS+ + Q RR E+ I+ + LT KE + +
Sbjct: 22 KKLESDGEGNRRSRLTVTSVYESIKASNSSLAR-QKRRPLEDSIE--RVLTYRKEELKAD 78
Query: 214 RETIRVKAMAEAEGRAHEAKLTEDHNR-RMLIER 246
+ E + A EAK R L+ R
Sbjct: 79 EDGGDSDEALERDIAAAEAKAAAKRERDAFLLNR 112
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 186 (70.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 56/163 (34%), Positives = 83/163 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGG--DV 423
L+ + L T T++ R +L GPPGTGKTM+AR +A ++ + + M+G D
Sbjct: 279 LEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDE 338
Query: 424 APLGAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLF--- 480
+G A ++ E+F A+K ++ FIDE DA +RN+ + R LN LL
Sbjct: 339 MYVGVGA-KRVRELFAAARKQAPSII-FIDELDAIGQKRNARDAAH-MRQTLNQLLVDLD 395
Query: 481 ---RTGDQSRDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLP 518
+ D + +V + ATN P LD A+T R D I PLP
Sbjct: 396 GFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLP 438
Score = 61 (26.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 561 KDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYA 596
KD+ ++I AR T GF+G ++A L+ QAAVYA
Sbjct: 458 KDVDLSII---ARGTSGFAGADLANLIN--QAAVYA 488
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 184 (69.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 52/146 (35%), Positives = 81/146 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YG PGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 221 PPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLG-DGPKMVRELFRVAEE 279
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
+ ++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 280 NAPSIV-FIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIE 338
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 339 SLDPALIRPGRIDRKIEFPLPDEKTK 364
Score = 56 (24.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 32/157 (20%), Positives = 68/157 (43%)
Query: 129 QRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQE-ESSIRK 187
++K +++ + + + +G + D ++ T H R +L+K + + +
Sbjct: 21 EKKEKKKYEAPIPSRIGKKKKGSKGPDAASKLPAVTPHA---RCRLKLLKSERIKDYLLM 77
Query: 188 EQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERI 247
EQ +E+++ Q+ E+ERA+++ +R MA G E + + H I
Sbjct: 78 EQEFIQNQERLKPQEERQEEERAKVDE--LRGTPMAV--GSLEEI-IDDQH----AIVST 128
Query: 248 NGEREKWLAAIN-TTFSHIEEGVRSLLTDRNKLVMTV 283
N E ++ ++ +E G LL +N V+ V
Sbjct: 129 NVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGV 165
Score = 37 (18.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 91 HAREAFDIMRKQEQTRLAELDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQ 142
HAR ++ K E+ + D + E IQ+Q ++ Q + EE R V +
Sbjct: 58 HARCRLKLL-KSERIK----DYLLMEQEFIQNQERLKPQEERQEEERAKVDE 104
>UNIPROTKB|I3LL27 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0048471 Pfam:PF04212 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
GeneTree:ENSGT00550000074466 CTD:27183 KO:K12196 OMA:VRWNDVA
EMBL:FP015939 EMBL:FP325157 RefSeq:NP_001230347.1 UniGene:Ssc.15717
Ensembl:ENSSSCT00000026219 GeneID:100627841 KEGG:ssc:100627841
Uniprot:I3LL27
Length = 437
Score = 179 (68.1 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 60/190 (31%), Positives = 94/190 (49%)
Query: 339 IRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGT 398
IR AG G EA+K + ++ P + HL + P+R +L +GPPGT
Sbjct: 124 IRWNDVAGLEGAKEALK---EAVILPI---KFPHLFTGK------RTPWRGILLFGPPGT 171
Query: 399 GKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDWAKKSKKGLLLFIDEA 455
GK+ +A+ +A ++ + ++ D+ LG ++ + +F+ A++ K ++ FIDE
Sbjct: 172 GKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELARQHKPSII-FIDEV 229
Query: 456 DAFLCERNSIHMSEAQRSALNALLFRTG-DQSRDIVLVL-ATNRPGDLDSAITDRIDEVI 513
D+ RN A+R L+ G + D LVL ATN P LDSAI R ++ I
Sbjct: 230 DSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRI 289
Query: 514 EFPLPREEER 523
PLP E R
Sbjct: 290 YIPLPEEAAR 299
Score = 61 (26.5 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIA 584
T +L++ I E ARKTEG+SG +I+
Sbjct: 310 TPHNLTEANIHELARKTEGYSGADIS 335
>TAIR|locus:2038678 [details] [associations]
symbol:SKD1 "SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005771 "multivesicular body"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
[GO:0016192 "vesicle-mediated transport" evidence=RCA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007033 "vacuole
organization" evidence=IMP] [GO:0010091 "trichome branching"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0006623
"protein targeting to vacuole" evidence=RCA] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0006869 "lipid transport"
evidence=RCA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0010351 "lithium ion transport" evidence=RCA] [GO:0016197
"endosomal transport" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0009506
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GO:GO:0016192
Pfam:PF04212 HSSP:Q01853 GO:GO:0017111 EMBL:AC006232 GO:GO:0007032
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005771 GO:GO:0007033
EMBL:AC005824 GO:GO:0010091 SMART:SM00745 HOGENOM:HOG000225146
UniGene:At.13265 KO:K12196 OMA:FTGKRIP EMBL:AF367297 EMBL:AY091684
IPI:IPI00544233 PIR:F84674 RefSeq:NP_180328.1 SMR:Q9ZNT0
IntAct:Q9ZNT0 STRING:Q9ZNT0 EnsemblPlants:AT2G27600.1 GeneID:817306
KEGG:ath:AT2G27600 TAIR:At2g27600 InParanoid:Q9ZNT0
ProtClustDB:CLSN2683515 Genevestigator:Q9ZNT0 Uniprot:Q9ZNT0
Length = 435
Score = 187 (70.9 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 45/142 (31%), Positives = 75/142 (52%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P+R L YGPPGTGK+ +A+ +A ++ + ++ D V+ ++ + +F+ A++S
Sbjct: 164 PWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARES 223
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFR---TGDQSRDIVLVLATNRPGDL 501
++ F+DE D+ R + SEA R LL + G ++++ ATN P L
Sbjct: 224 APSII-FVDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYAL 282
Query: 502 DSAITDRIDEVIEFPLPREEER 523
D AI R D+ I PLP + R
Sbjct: 283 DQAIRRRFDKRIYIPLPEAKAR 304
Score = 52 (23.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMASV 590
H+FK T +L++ + +KTEGFSG +++ + V
Sbjct: 306 HMFKVHLGD-TPHNLTEPDFEYLGQKTEGFSGSDVSVCVKDV 346
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 193 (73.0 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 53/146 (36%), Positives = 81/146 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YGPPGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 145 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 203
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 204 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 262
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 263 TLDPALIRPGRIDRKIEFPLPDEKTK 288
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 194 (73.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 53/146 (36%), Positives = 80/146 (54%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + +L YGPPGTGKT++AR IA ++ + + +G A I E+F++A++
Sbjct: 172 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESA-RLIREMFNYARE 230
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++F+DE DA R S S E QR+ + L G DQ + +++ATNRP
Sbjct: 231 HQP-CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 289
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IE PLP E+ R
Sbjct: 290 VLDPALLRPGRLDRKIEIPLPNEQSR 315
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 193 (73.0 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 53/164 (32%), Positives = 81/164 (49%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPG GKTM+A+ +A + + + G + LG + + ++F AK+
Sbjct: 197 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 255
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G DQ+ ++ +++ATNR
Sbjct: 256 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 314
Query: 500 DLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGD 541
LD A+ R+D IEFPLP ++ S+E D
Sbjct: 315 TLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVD 358
Score = 44 (20.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEA 232
K+Q+E + Q EE I+ +Q+ +KE + E R++++ G+ EA
Sbjct: 45 KLQQELEFLEVQ-----EEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEA 94
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 195 (73.7 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 51/145 (35%), Positives = 77/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 219 PPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMAR-T 277
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK ++F DE DA R + +E QR+ L + G D +I ++ ATNRP
Sbjct: 278 KKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNT 337
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID +EF LP E R
Sbjct: 338 LDPALLRPGRIDRKVEFSLPDLEGR 362
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 193 (73.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 53/164 (32%), Positives = 81/164 (49%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPG GKTM+A+ +A + + + G + LG + + ++F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G DQ+ ++ +++ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 500 DLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGD 541
LD A+ R+D IEFPLP ++ S+E D
Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVD 359
Score = 44 (20.5 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEA 232
K+Q+E + Q EE I+ +Q+ +KE + E R++++ G+ EA
Sbjct: 46 KLQQELEFLEVQ-----EEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEA 95
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 193 (73.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 53/164 (32%), Positives = 81/164 (49%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPG GKTM+A+ +A + + + G + LG + + ++F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G DQ+ ++ +++ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 500 DLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGD 541
LD A+ R+D IEFPLP ++ S+E D
Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVD 359
Score = 44 (20.5 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEA 232
K+Q+E + Q EE I+ +Q+ +KE + E R++++ G+ EA
Sbjct: 46 KLQQELEFLEVQ-----EEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEA 95
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 193 (73.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 53/164 (32%), Positives = 81/164 (49%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPG GKTM+A+ +A + + + G + LG + + ++F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G DQ+ ++ +++ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 500 DLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGD 541
LD A+ R+D IEFPLP ++ S+E D
Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVD 359
Score = 44 (20.5 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEA 232
K+Q+E + Q EE I+ +Q+ +KE + E R++++ G+ EA
Sbjct: 46 KLQQELEFLEVQ-----EEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEA 95
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 193 (73.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 53/164 (32%), Positives = 81/164 (49%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPG GKTM+A+ +A + + + G + LG + + ++F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G DQ+ ++ +++ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 500 DLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGD 541
LD A+ R+D IEFPLP ++ S+E D
Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVD 359
Score = 44 (20.5 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEA 232
K+Q+E + Q EE I+ +Q+ +KE + E R++++ G+ EA
Sbjct: 46 KLQQELEFLEVQ-----EEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEA 95
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 193 (73.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 53/164 (32%), Positives = 81/164 (49%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPG GKTM+A+ +A + + + G + LG + + ++F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G DQ+ ++ +++ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 500 DLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGD 541
LD A+ R+D IEFPLP ++ S+E D
Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVD 359
Score = 44 (20.5 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEA 232
K+Q+E + Q EE I+ +Q+ +KE + E R++++ G+ EA
Sbjct: 46 KLQQELEFLEVQ-----EEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEA 95
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 193 (73.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 53/164 (32%), Positives = 81/164 (49%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPG GKTM+A+ +A + + + G + LG + + ++F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G DQ+ ++ +++ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 500 DLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGD 541
LD A+ R+D IEFPLP ++ S+E D
Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVD 359
Score = 44 (20.5 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEA 232
K+Q+E + Q EE I+ +Q+ +KE + E R++++ G+ EA
Sbjct: 46 KLQQELEFLEVQ-----EEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEA 95
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 194 (73.4 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 53/164 (32%), Positives = 81/164 (49%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPGTGKTM+A+ +A + + + G + LG + + ++F A++
Sbjct: 183 PPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLG-EGPRLVRDVFRLARE 241
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR + L G D S ++ +++ATNR
Sbjct: 242 NSPAII-FIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQD 300
Query: 500 DLDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGD 541
LD A+ R+D IEFPLP ++ SDE D
Sbjct: 301 TLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVD 344
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 192 (72.6 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 50/145 (34%), Positives = 77/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + ++ YGPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 212 PPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMAR-T 270
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK ++F DE DA R + +E QR+ L + G D +I ++ ATNRP
Sbjct: 271 KKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNT 330
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID +EF LP E R
Sbjct: 331 LDEALMRPGRIDRKVEFGLPDLEGR 355
Score = 46 (21.3 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 30/121 (24%), Positives = 54/121 (44%)
Query: 201 QQRLTEKERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINT 260
+QR++E++ ++ R T ++ AE A+ L + + ++ GER ++
Sbjct: 86 RQRMSEEQPLQVARCTKIIENEQSAEKNAYVINLKQI--AKFVVSL--GER------VSP 135
Query: 261 TFSHIEEGVRSLLTDRNKLVMTVGGATALAAGI--YTTREGARVTWGYVNRILGQPSLIR 318
T IEEG+R + DRNK + + + + E VT+G V Q +R
Sbjct: 136 T--DIEEGMR-VGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLR 192
Query: 319 E 319
E
Sbjct: 193 E 193
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 199 (75.1 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 76/251 (30%), Positives = 123/251 (49%)
Query: 287 TALAAGIYTTREGARVTWGYVNRILGQPSLIRESSIGKFPWSGLLSQAMNKVIRNKTSAG 346
T L + REG+ R+L PS+ +S+ F + + S+ +N+T++
Sbjct: 277 TGLECSFESAREGSEQPVNE-ERLLKSPSVGAQSNTDTFYF--ISSKTRVSFTKNRTNS- 332
Query: 347 TAGPVEAIKNNGDII--LHPSLQ--RRIQHLA-KATANTKIHQAPF-RNMLFYGPPGTGK 400
+K D+I L+ L+ R I L K K + P R +L YGPPGTGK
Sbjct: 333 -KDQANQLKVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGK 391
Query: 401 TMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFL 459
TM+AR +A + G +++ G ++ + + ++ +IF A ++ FIDE DA L
Sbjct: 392 TMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSII-FIDELDA-L 449
Query: 460 CERNSIHMSEAQRSALNALL-FRTG---DQSRDIVLVL-ATNRPGDLDSAIT--DRIDEV 512
C + +E ++ + +LL G + S VLVL ATNRP LD+A+ R D+
Sbjct: 450 CPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKE 509
Query: 513 IEFPLPREEER 523
IE +P ++R
Sbjct: 510 IEIGVPNAQDR 520
Score = 153 (58.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 380 TKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVA-PLGAQAVTKIHEIF 438
T++ P + +L YGPPG KTM+A+ +A +SGL++ + G ++ ++ + EIF
Sbjct: 645 TQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIF 704
Query: 439 DWAKKSKKGLLLFIDEADAFLCERNSIHMSE--AQRSALNALLFRTG-DQSRDIVLVLAT 495
A+ ++ F DE DA ER S + A R L G +Q +++ ++ AT
Sbjct: 705 RKARAVAPSIIFF-DELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAAT 763
Query: 496 NRPGDLD 502
NRP +D
Sbjct: 764 NRPDRID 770
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 184 (69.8 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 50/147 (34%), Positives = 78/147 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L +GPPG GKTM+A+ +A + + + G + LG + + ++F AK+
Sbjct: 185 PPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLG-EGPRMVRDLFRLAKQ 243
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G D++ +I +++ATNR
Sbjct: 244 NSPSII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRAD 302
Query: 500 DLDSAIT--DRIDEVIEFPLP-REEER 523
LD A+ R+D IE PLP R ++R
Sbjct: 303 TLDPALLRPGRLDRKIELPLPDRRQKR 329
Score = 53 (23.7 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 137 RNLVQQKAQARAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEE 196
R L ++ AQ Q L D L L ++ + + EL+++QE+ I++EQ R +E
Sbjct: 2 RLLKEEIAQFHEQSLEKYDGLDPHDLYVLYK-KLQMELELIQVQEDY-IKEEQ-RNLKKE 58
Query: 197 QIQAQQRL 204
I AQ+ +
Sbjct: 59 FIHAQEEV 66
Score = 50 (22.7 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 195 EEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEA 232
E+ I+ +QR +KE + E R+KA+ G+ EA
Sbjct: 45 EDYIKEEQRNLKKEFIHAQEEVKRIKAVPLVIGQFLEA 82
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 195 (73.7 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 51/142 (35%), Positives = 79/142 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 179 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 238
Query: 447 GLLLFIDEADAF--LCERNSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLDS 503
++ F+DE D+ E S SE QR+ L L G + +++I +++ATNR LDS
Sbjct: 239 SII-FMDEIDSIGSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDS 297
Query: 504 AIT--DRIDEVIEFPLPREEER 523
A+ RID IEFP P EE R
Sbjct: 298 ALLRPGRIDRKIEFPPPNEEAR 319
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 207 (77.9 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 48/138 (34%), Positives = 82/138 (59%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT+VAR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 239 PPRGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 298
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSR-DIVLVLATNRPGDLD 502
++ FIDE DA +R H E +R ++ LL G + R +V++ ATNRP +D
Sbjct: 299 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVD 356
Query: 503 SAIT--DRIDEVIEFPLP 518
+A+ R D I+ +P
Sbjct: 357 AALRRFGRFDREIDIGIP 374
Score = 174 (66.3 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 44/146 (30%), Positives = 79/146 (54%)
Query: 381 KIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFD 439
K P R +LFYGPPG GKT++A+ IA + ++ + G ++ + ++ + ++FD
Sbjct: 507 KFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESEANVRDVFD 566
Query: 440 WAKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSA---LNALLFRTGDQS--RDIVLVLA 494
A+++ +LF DE D+ R +A +A +N +L + +++ ++ A
Sbjct: 567 KARQAAP-CILFFDELDSIAKARGG-GAGDAGGAADRVINQILTEMDGMTNKKNVFIIGA 624
Query: 495 TNRPGDLDSAIT--DRIDEVIEFPLP 518
TNRP +D AI R+D++I PLP
Sbjct: 625 TNRPDIIDPAILRPGRLDQLIYIPLP 650
Score = 46 (21.3 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DEL A KR +T E +RR ++L+ +
Sbjct: 275 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 334
Query: 181 E 181
+
Sbjct: 335 D 335
Score = 39 (18.8 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 575 TEGFSGREIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVEEHHQR 621
TEGFSG ++ ++ Q A C L RE +E ++ QR
Sbjct: 681 TEGFSGADLTEIC---QRA------CKL---AIREAIEAEIRAERQR 715
Score = 38 (18.4 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 11/49 (22%), Positives = 26/49 (53%)
Query: 110 LDVEKVHYEAIQSQVDVERQRKLAEEH----RNLVQQKAQARAQGLRNE 154
L++ ++H + ++ DV+ ++ AE H +L ++A Q +R +
Sbjct: 380 LEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKK 428
>TIGR_CMR|GSU_0972 [details] [associations]
symbol:GSU_0972 "ATPase, AAA family" species:243231
"Geobacter sulfurreducens PCA" [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019538 "protein metabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111
RefSeq:NP_952026.1 ProteinModelPortal:Q74EJ0 GeneID:2685692
KEGG:gsu:GSU0972 PATRIC:22024718 HOGENOM:HOG000132392 OMA:YANIESA
ProtClustDB:CLSK741809 BioCyc:GSUL243231:GH27-1006-MONOMER
Uniprot:Q74EJ0
Length = 743
Score = 198 (74.8 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 69/200 (34%), Positives = 97/200 (48%)
Query: 340 RNKTSAGT-AGPVEAIKNNGDIILHPSLQR----------RIQHLAKAT--ANTKIHQAP 386
R+ T GT A +E + DI+L P+LQ R +HL + K+
Sbjct: 464 RSHTRLGTLARRLEPVHTLDDIVL-PALQMAQLREICAQVRYRHLVFGQWGFDRKLSSGK 522
Query: 387 FRNMLFYGPPGTGKTMVAREIARKSGLD-YAMMTGGDVAPLGAQAVTKIHEIFDWAKKSK 445
+LF GPPGTGKTM A IAR+ GL+ Y + V+ + + IF A+
Sbjct: 523 GLTVLFTGPPGTGKTMAAAVIARELGLELYRIDLSQVVSKYIGETEKNLERIF--AEAET 580
Query: 446 KGLLLFIDEADAFLCERNSIHMSEAQRSALNA--LLFRTGDQSRDIVLVLATNRPGDLDS 503
G +LF DEADA R+ + + + + + LL R + S + +LATN +LD
Sbjct: 581 AGAILFFDEADALFGRRSEVKDAHDRYANIEIGYLLQRMEEYSG--ISILATNLRQNLDE 638
Query: 504 AITDRIDEVIEFPLPREEER 523
A T RI V+EFP P EE R
Sbjct: 639 AFTRRIRIVVEFPFPDEEYR 658
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 194 (73.4 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 52/145 (35%), Positives = 77/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + L YGPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 218 PPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMAR-T 276
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPGD 500
KK ++F DE DA R + +E QR+ L + G +R +I ++ ATNRP
Sbjct: 277 KKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDARGNIKVMFATNRPST 336
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEF LP E R
Sbjct: 337 LDPALMRPGRIDRKIEFSLPDVEGR 361
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 191 (72.3 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 58/173 (33%), Positives = 87/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F N+ L YGPPGTGKT++AR A ++ +
Sbjct: 149 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 208
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 209 LAGPQLVQMFIGDGAKLVRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 267
Query: 474 ALNALLFRTGDQ-SRDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G Q + + ++ ATNR LD A+ + R+D IEFP+P EE R
Sbjct: 268 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 320
Score = 44 (20.5 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 181 EESSIRKEQARRSTEEQIQAQQRLTEKE 208
E+ I +E + STEE IQ + RL + E
Sbjct: 25 EQDGIGEEVLKMSTEEIIQ-RTRLLDSE 51
Score = 37 (18.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 103 EQTRLAE-----LDVEKVHYEAIQSQVDVERQRK 131
++TRL + LDV+ E + +D++ QRK
Sbjct: 43 QRTRLLDSEIKLLDVDPNDQEEDGANIDLDSQRK 76
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 188 (71.2 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 71 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 129
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 130 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 189
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 190 LDPALMRPGRLDRKIEFSLPDLEGR 214
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 193 (73.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 51/143 (35%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query: 447 GLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++ F+DE D+ R S SE QR+ L L G + +++I +++ATNR LD
Sbjct: 244 SII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
SA+ RID IEFP P EE R
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEAR 325
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 193 (73.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 51/143 (35%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query: 447 GLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++ F+DE D+ R S SE QR+ L L G + +++I +++ATNR LD
Sbjct: 244 SII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
SA+ RID IEFP P EE R
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEAR 325
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 193 (73.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 51/143 (35%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query: 447 GLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++ F+DE D+ R S SE QR+ L L G + +++I +++ATNR LD
Sbjct: 244 SII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
SA+ RID IEFP P EE R
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEAR 325
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 193 (73.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 51/143 (35%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query: 447 GLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++ F+DE D+ R S SE QR+ L L G + +++I +++ATNR LD
Sbjct: 244 SII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
SA+ RID IEFP P EE R
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEAR 325
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 193 (73.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 51/143 (35%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query: 447 GLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++ F+DE D+ R S SE QR+ L L G + +++I +++ATNR LD
Sbjct: 244 SII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
SA+ RID IEFP P EE R
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEAR 325
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 193 (73.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 51/143 (35%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query: 447 GLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++ F+DE D+ R S SE QR+ L L G + +++I +++ATNR LD
Sbjct: 244 SII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
SA+ RID IEFP P EE R
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEAR 325
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 193 (73.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 51/143 (35%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query: 447 GLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++ F+DE D+ R S SE QR+ L L G + +++I +++ATNR LD
Sbjct: 244 SII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
SA+ RID IEFP P EE R
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEAR 325
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 193 (73.0 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 51/143 (35%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 190 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 249
Query: 447 GLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++ F+DE D+ R S SE QR+ L L G + +++I +++ATNR LD
Sbjct: 250 SII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 308
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
SA+ RID IEFP P EE R
Sbjct: 309 SALLRPGRIDRKIEFPPPNEEAR 331
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 193 (73.0 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 51/143 (35%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 192 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 251
Query: 447 GLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++ F+DE D+ R S SE QR+ L L G + +++I +++ATNR LD
Sbjct: 252 SII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 310
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
SA+ RID IEFP P EE R
Sbjct: 311 SALLRPGRIDRKIEFPPPNEEAR 333
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 193 (73.0 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 51/143 (35%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 192 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 251
Query: 447 GLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++ F+DE D+ R S SE QR+ L L G + +++I +++ATNR LD
Sbjct: 252 SII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 310
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
SA+ RID IEFP P EE R
Sbjct: 311 SALLRPGRIDRKIEFPPPNEEAR 333
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 206 (77.6 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 46/138 (33%), Positives = 82/138 (59%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 234 PPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 293
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTG-DQSRDIVLVLATNRPGDLD 502
++ FIDE DA +R+ H E +R ++ LL G +S ++++ ATNRP +D
Sbjct: 294 SPAII-FIDEIDAIAPKRDKTH-GEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSID 351
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D I+ +P
Sbjct: 352 PALRRFGRFDREIDIGIP 369
Score = 186 (70.5 bits), Expect = 4.2e-10, Sum P(3) = 4.2e-10
Identities = 54/183 (29%), Positives = 95/183 (51%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E++K L +Q ++H K K P R +LFYGPPG GKT++A+ IA
Sbjct: 477 GGLESVKKE----LQELVQYPVEHPDKFL---KFGMQPSRGVLFYGPPGCGKTLLAKAIA 529
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHM 467
+ ++ + G ++ + ++ + +IFD A+ S +LF DE D+ R ++
Sbjct: 530 NECQANFISVKGPELLTMWFGESEANVRDIFDKAR-SAAPCVLFFDELDSIAKARGG-NV 587
Query: 468 SEAQRSA---LNALLFRTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPRE 520
+A +A +N +L +++ ++ ATNRP +D AI R+D++I PLP +
Sbjct: 588 GDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDD 647
Query: 521 EER 523
+ R
Sbjct: 648 KSR 650
Score = 43 (20.2 bits), Expect = 4.2e-10, Sum P(3) = 4.2e-10
Identities = 13/52 (25%), Positives = 28/52 (53%)
Query: 110 LDVEKVHYEAIQSQVDVERQRKLAEEH----RNLVQQKAQARAQGLRNEDEL 157
L+V ++H + ++ DV+ ++ AE H +L ++A Q +R + +L
Sbjct: 375 LEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDL 426
Score = 40 (19.1 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQE 181
D +A KR +T E +RR ++L+ + +
Sbjct: 304 DAIAPKRDKTHGEVERRIVSQLLTLMD 330
Score = 39 (18.8 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T+GFSG ++ ++
Sbjct: 673 AKVTQGFSGADLTEI 687
Score = 37 (18.1 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 608 REVVEYKVEEHHQRIKLAAEGSQPTK 633
+E+V+Y VE + +K G QP++
Sbjct: 487 QELVQYPVEHPDKFLKF---GMQPSR 509
>TAIR|locus:2137777 [details] [associations]
symbol:AT4G27680 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161571 GO:GO:0000502
HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111 HOGENOM:HOG000225141
EMBL:AL035602 OMA:EMCRNAS ProtClustDB:CLSN2685508 EMBL:AY093063
EMBL:AY085265 EMBL:BT000126 EMBL:AK226334 IPI:IPI00547334
PIR:T05873 RefSeq:NP_194498.1 UniGene:At.32076
ProteinModelPortal:Q9T090 SMR:Q9T090 STRING:Q9T090 PaxDb:Q9T090
PRIDE:Q9T090 EnsemblPlants:AT4G27680.1 GeneID:828882
KEGG:ath:AT4G27680 TAIR:At4g27680 InParanoid:Q9T090
PhylomeDB:Q9T090 Genevestigator:Q9T090 Uniprot:Q9T090
Length = 398
Score = 196 (74.1 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 62/184 (33%), Positives = 99/184 (53%)
Query: 346 GTAGPVEAIKNN-GDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVA 404
G+ G +E IK ++++ P L+R + A K+ P + +L YGPPGTGKTM+A
Sbjct: 84 GSIGGLETIKQALYELVILP-LKR-----PELFAYGKL-LGPQKGVLLYGPPGTGKTMLA 136
Query: 405 REIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERN 463
+ IA++SG + + ++ + A + +F A K + ++ FIDE ++FL +R
Sbjct: 137 KAIAKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAII-FIDEVESFLGQRR 195
Query: 464 SI-HMSEAQ-RSALNALL--FRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPR 519
S H + A ++ AL F T +R +VL ATNRP +LD AI R+ + E +P
Sbjct: 196 STDHEAMANMKTEFMALWDGFSTDPHARVMVLA-ATNRPSELDEAILRRLPQAFEIGIPD 254
Query: 520 EEER 523
ER
Sbjct: 255 RRER 258
Score = 38 (18.4 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 557 KITIKD--LSDNV-IQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQ 605
K+T+K + ++ AR EG++G +I +L +AA + + +LD++
Sbjct: 263 KVTLKGERVEPDIDFDHIARLCEGYTGSDIFELCK--KAAYFPIRE-ILDAE 311
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 188 (71.2 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 55/147 (37%), Positives = 77/147 (52%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAK 442
+AP + L YGPPGTGKT++AR A ++ + + + + + + + F AK
Sbjct: 213 RAP-KGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAK 271
Query: 443 KSKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTGDQSRDIVLVLA-TNRP 498
+ K ++FIDE DA +R S E QR+ L L G S D V VLA TNR
Sbjct: 272 E-KAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRV 330
Query: 499 GDLDSAI--TDRIDEVIEFPLPREEER 523
LD A+ + R+D IEFPLP E+ R
Sbjct: 331 DVLDPALLRSGRLDRKIEFPLPSEDSR 357
Score = 44 (20.5 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 556 QKITIKDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYA 596
+K+T D D QE AR T+ F+G ++ + +V+A + A
Sbjct: 366 RKMTTDD--DINWQELARSTDEFNGAQLKAV--TVEAGMIA 402
Score = 42 (19.8 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 206 EKERAEIERETIRVKA-MAEAEGRAHEAKLTE-DHNRRMLIERINGEREK 253
++E + + ++ +A + + E R ++L H +++E+I +EK
Sbjct: 19 DQEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEK 68
>UNIPROTKB|F1S3Z2 [details] [associations]
symbol:SPAST "Spastin" species:9823 "Sus scrofa"
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051013
"microtubule severing" evidence=IEA] [GO:0048487 "beta-tubulin
binding" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0007109 "cytokinesis, completion of separation"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0015630
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 OMA:HKSTPKT EMBL:FP583344
EMBL:CU694619 Ensembl:ENSSSCT00000009321 Uniprot:F1S3Z2
Length = 479
Score = 190 (71.9 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 62/203 (30%), Positives = 103/203 (50%)
Query: 328 SGLLSQAMNKVIRNKTSA---GTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQ 384
S L + MN+++ N T+ AG A + +I++ PSL+ + T + +
Sbjct: 236 SNLANFIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELF--------TGL-R 286
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A++
Sbjct: 287 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARE 346
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR--DIVLVL-ATNRPGD 500
+ ++ FIDE D+ L ER ++R L+ G QS D VLV+ ATNRP +
Sbjct: 347 LQPSII-FIDEVDSLLRERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQE 405
Query: 501 LDSAITDRIDEVIEFPLPREEER 523
LD A+ R + + LP EE R
Sbjct: 406 LDEAVLRRFIKRVYVSLPNEETR 428
Score = 48 (22.0 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
+L KQ +T K+L+ + AR T+G+SG ++ L
Sbjct: 434 NLLCKQGSPLTQKELA-----QLARLTDGYSGSDLTAL 466
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 193 (73.0 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 53/146 (36%), Positives = 81/146 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YGPPGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 216 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 274
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 275 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 333
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 334 TLDPALIRPGRIDRKIEFPLPDEKTK 359
>WB|WBGene00010557 [details] [associations]
symbol:mspn-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0040007 GO:GO:0002119
GO:GO:0005741 GO:GO:0010171 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000225141 GeneTree:ENSGT00550000074823 EMBL:Z69664
PIR:T23311 RefSeq:NP_501860.1 RefSeq:NP_501861.1 UniGene:Cel.22858
ProteinModelPortal:P54815 SMR:P54815 IntAct:P54815
MINT:MINT-1100399 STRING:P54815 PaxDb:P54815 PRIDE:P54815
EnsemblMetazoa:K04D7.2a.1 EnsemblMetazoa:K04D7.2a.2 GeneID:177896
KEGG:cel:CELE_K04D7.2 UCSC:K04D7.2a CTD:177896 WormBase:K04D7.2a
WormBase:K04D7.2b InParanoid:P54815 OMA:GDQIIVM NextBio:898840
Uniprot:P54815
Length = 342
Score = 190 (71.9 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 49/142 (34%), Positives = 79/142 (55%)
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHE-IFDWAKK 443
+P R +L YGPPG GKT++A+ +AR +G + + ++ K+ +F A+K
Sbjct: 115 SPPRGILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQK 174
Query: 444 SKKGLLLFIDEADAFLCERNSI-HMSEAQRSALNALLFRTGDQSRDIVLVL-ATNRPGDL 501
+ ++FIDE D+FL +R S H S A A L+ S D ++V+ ATNRP D+
Sbjct: 175 FQP-TIIFIDEIDSFLRDRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDV 233
Query: 502 DSAITDRIDEVIEFPLPREEER 523
D+AI R+ + P+P ++R
Sbjct: 234 DAAILRRMTARFQVPVPNAKQR 255
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 193 (73.0 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 53/146 (36%), Positives = 81/146 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YGPPGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 217 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 275
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 276 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 334
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 335 TLDPALIRPGRIDRKIEFPLPDEKTK 360
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 193 (73.0 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 53/146 (36%), Positives = 81/146 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YGPPGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTK 361
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 193 (73.0 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 53/146 (36%), Positives = 81/146 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YGPPGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTK 361
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 193 (73.0 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 53/146 (36%), Positives = 81/146 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YGPPGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTK 361
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 193 (73.0 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 53/146 (36%), Positives = 81/146 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YGPPGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTK 361
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 193 (73.0 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 53/146 (36%), Positives = 81/146 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YGPPGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTK 361
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 193 (73.0 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 53/146 (36%), Positives = 81/146 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YGPPGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTK 361
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 192 (72.6 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 53/146 (36%), Positives = 81/146 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YGPPGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 217 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 275
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 276 HAPSIV-FIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 334
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 335 TLDPALIRPGRIDRKIEFPLPDEKTK 360
Score = 44 (20.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 143 KAQARAQGLRNEDELARKRLQ-TDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQ 201
K + RA+G + A K Q T H R +L ++++ + E R +E+++ Q
Sbjct: 34 KKKRRAKG----PDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRN--QERLKPQ 87
Query: 202 QRLTEKERAEIE 213
E+ER++++
Sbjct: 88 DEKNEEERSKVD 99
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 186 (70.5 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 57/172 (33%), Positives = 86/172 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F+N+ + YGPPGTGKT++AR A ++ +
Sbjct: 184 LDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPPGTGKTLLARACAAQTKSTFLK 243
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 244 LAGPQLVQMFIGDGAKLVRDAFALAKE-KAPAIIFIDELDAIGTKRFDSEKAGDREVQRT 302
Query: 474 ALNALLFRTGDQSR-DIVLVLATNRPGDLDSAI-TDRIDEVIEFPLPREEER 523
L L G S DI ++ ATNR L + + + R+D IEFP P EE R
Sbjct: 303 MLELLNQLNGFSSTADIKVIAATNRVDILPALLRSGRLDRKIEFPHPNEEAR 354
Score = 50 (22.7 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 182 ESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMAEAE 226
E S+ ++ R ST+E I ++ RL + E ++ E IR+ +A+
Sbjct: 19 EESLGEKVMRMSTDE-IVSRTRLMDNEIKIMKSEVIRITHEIQAQ 62
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 183 (69.5 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 51/145 (35%), Positives = 77/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTK-IHEIFDWAKKS 444
P + +L YGPPGTGKT++AR A ++ + + G + + K + + F AK+
Sbjct: 236 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKE- 294
Query: 445 KKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTGDQ-SRDIVLVLATNRPGD 500
K ++FIDE DA +R + E QR+ L L G Q + + ++ ATNR
Sbjct: 295 KAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDI 354
Query: 501 LDSAI--TDRIDEVIEFPLPREEER 523
LD A+ + R+D IEFP+P EE R
Sbjct: 355 LDPALLRSGRLDRKIEFPMPNEEAR 379
Score = 54 (24.1 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 181 EESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRV 219
E+ I +E + STEE IQ + RL + E ++ E +RV
Sbjct: 26 EQDGIGEEVLKMSTEEIIQ-RTRLLDSEIKIMKSEVLRV 63
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 191 (72.3 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 58/173 (33%), Positives = 87/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F N+ L YGPPGTGKT++AR A ++ +
Sbjct: 137 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 196
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 197 LAGPQLVQMFIGDGAKLVRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 255
Query: 474 ALNALLFRTGDQ-SRDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G Q + + ++ ATNR LD A+ + R+D IEFP+P EE R
Sbjct: 256 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 308
>TAIR|locus:2031005 [details] [associations]
symbol:AT1G50140 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010332
"response to gamma radiation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016926
"protein desumoylation" evidence=RCA] [GO:0032204 "regulation of
telomere maintenance" evidence=RCA] [GO:0032504 "multicellular
organism reproduction" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0043247 "telomere
maintenance in response to DNA damage" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GO:GO:0005524 GO:GO:0017111
IPI:IPI00520428 RefSeq:NP_175433.2 UniGene:At.38089
ProteinModelPortal:F4I4Y6 SMR:F4I4Y6 PRIDE:F4I4Y6
EnsemblPlants:AT1G50140.1 GeneID:841436 KEGG:ath:AT1G50140
OMA:TRTIRRN Uniprot:F4I4Y6
Length = 1003
Score = 194 (73.4 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 52/145 (35%), Positives = 81/145 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LG-AQAVTKIHEIFDWAK 442
P + +L +GPPGTGKT++A+ +A ++G ++ +TG + G A+ +TK +F +A
Sbjct: 748 PCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKA--LFSFAT 805
Query: 443 KSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFR-TGDQSRDI--VLVL-ATNRP 498
K +++F+DE D+ L R EA R N + G +S+D +L+L ATNRP
Sbjct: 806 KLAP-VIIFVDEIDSLLGARGGSSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRP 864
Query: 499 GDLDSAITDRIDEVIEFPLPREEER 523
DLD A+ R+ I LP E R
Sbjct: 865 FDLDDAVIRRLPRRIYVDLPDAENR 889
Score = 53 (23.7 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 558 ITIKDL-SDNVIQEAARKTEGFSGREIAKLMASVQAAVYARP 598
+T ++L SD ++ A++TEG+SG ++ L AA Y RP
Sbjct: 897 LTPENLESDFQFEKLAKETEGYSGSDLKNLCI---AAAY-RP 934
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 192 (72.6 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 51/145 (35%), Positives = 79/145 (54%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPGTGKT++AR +A ++ + + G + V + + E+F A+ S
Sbjct: 201 PPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMAR-S 259
Query: 445 KKGLLLFIDEADAFLCERNSIHM---SEAQRSALNALLFRTGDQSR-DIVLVLATNRPGD 500
KK ++F DE DA R + +E QR+ L + G +R +I +++ATNRP
Sbjct: 260 KKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDT 319
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D +EF LP E R
Sbjct: 320 LDPALLRPGRLDRKVEFGLPDLESR 344
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 191 (72.3 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 58/173 (33%), Positives = 87/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F N+ L YGPPGTGKT++AR A ++ +
Sbjct: 141 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 200
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 201 LAGPQLVQMFIGDGAKLVRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 259
Query: 474 ALNALLFRTGDQ-SRDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G Q + + ++ ATNR LD A+ + R+D IEFP+P EE R
Sbjct: 260 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 312
>ASPGD|ASPL0000034586 [details] [associations]
symbol:AN3061 species:162425 "Emericella nidulans"
[GO:0005768 "endosome" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0045053 "protein retention in
Golgi apparatus" evidence=IEA] [GO:0070676 "intralumenal vesicle
formation" evidence=IEA] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0016125 "sterol
metabolic process" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001306 EMBL:AACD01000051 Pfam:PF04212 eggNOG:COG0464
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
HOGENOM:HOG000225146 KO:K12196 OMA:FTGKRIP OrthoDB:EOG4V1B8K
RefSeq:XP_660665.1 ProteinModelPortal:Q5B8R9 SMR:Q5B8R9
STRING:Q5B8R9 EnsemblFungi:CADANIAT00010018 GeneID:2874497
KEGG:ani:AN3061.2 Uniprot:Q5B8R9
Length = 434
Score = 192 (72.6 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 61/221 (27%), Positives = 107/221 (48%)
Query: 330 LLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRN 389
+LS+ N ++ + AG G EA+K + ++ P + HL + P++
Sbjct: 122 ILSEKPN--VKWEDVAGLEGAKEALK---EAVILPI---KFPHLFTG------RRQPWKG 167
Query: 390 MLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKKGL 448
+L YGPPGTGK+ +A+ +A ++ + ++ D V+ ++ + ++F+ A+++K +
Sbjct: 168 ILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFNMARENKPAI 227
Query: 449 LLFIDEADAFLCERNSIHMSEAQRSALNALLFR---TGDQSRDIVLVLATNRPGDLDSAI 505
+ FIDE DA LC + SEA R LL + G+ S+ ++++ ATN P LD+AI
Sbjct: 228 I-FIDEVDA-LCGARGENDSEASRRIKTELLVQMDGVGNDSKGVLILGATNIPWQLDAAI 285
Query: 506 TDRIDEVIEFPLPREEERFXXXXXXXXXXXCS-DEGDSSSL 545
R + LP R C + D SL
Sbjct: 286 RRRFQRRVHISLPDINARMKMFMLAVGSTPCHMTQADYRSL 326
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 192 (72.6 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 53/146 (36%), Positives = 81/146 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YGPPGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 277 HGPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTK 361
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 195 (73.7 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 43/137 (31%), Positives = 76/137 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L +GPPGTGKT++AR +A ++G + ++ G ++ + + ++ + + + F +K+
Sbjct: 242 PPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKN 301
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPGDLDS 503
+L FIDE DA +R H +R L G ++R +V++ ATNRP +D
Sbjct: 302 SPAIL-FIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDG 360
Query: 504 AIT--DRIDEVIEFPLP 518
A+ R D I+ +P
Sbjct: 361 ALRRFGRFDREIDIGIP 377
Score = 178 (67.7 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 48/167 (28%), Positives = 87/167 (52%)
Query: 366 LQRRIQHLAKATAN-TKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVA 424
LQ +Q+ + K P R +LFYGPPG GKT++A+ IA + ++ + G ++
Sbjct: 494 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 553
Query: 425 PLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSA---LNALLF 480
+ ++ + ++FD A+ + +LF DE D+ R + +A +A +N +L
Sbjct: 554 TMWFGESEANVRDVFDKARAAAP-CVLFFDELDSIAKARGG-SVGDAGGAADRVINQVLT 611
Query: 481 RTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPREEER 523
+ +++ ++ ATNRP +D A+ R+D++I PLP E R
Sbjct: 612 EMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASR 658
Score = 49 (22.3 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 550 LFKKQQQKITIK-DLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFR 608
+FK +K + DL N + A+ T GFSG ++ ++ Q A C L R
Sbjct: 661 IFKASLRKTPLSADLDLNFL---AKNTVGFSGADLTEIC---QRA------CKL---AIR 705
Query: 609 EVVEYKVEEHHQRIKLAAEGSQ 630
E +E ++ + +R +A G +
Sbjct: 706 ESIEREIRQEKERQDRSARGEE 727
Score = 41 (19.5 bits), Expect = 7.2e-11, Sum P(3) = 7.2e-11
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLMASVQAAV 594
L ++V +++ A + GF G ++A L + +AA+
Sbjct: 395 LGEDVDLEQVANECHGFVGADLASLCS--EAAI 425
Score = 39 (18.8 bits), Expect = 7.2e-11, Sum P(3) = 7.2e-11
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 608 REVVEYKVEEHHQRIKLAAEGSQPTK 633
+E+V+Y VE + +K G QP++
Sbjct: 495 QELVQYPVEHPEKYLKF---GMQPSR 517
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 195 (73.7 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 43/137 (31%), Positives = 76/137 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L +GPPGTGKT++AR +A ++G + ++ G ++ + + ++ + + + F +K+
Sbjct: 242 PPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKN 301
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPGDLDS 503
+L FIDE DA +R H +R L G ++R +V++ ATNRP +D
Sbjct: 302 SPAIL-FIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDG 360
Query: 504 AIT--DRIDEVIEFPLP 518
A+ R D I+ +P
Sbjct: 361 ALRRFGRFDREIDIGIP 377
Score = 178 (67.7 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 48/167 (28%), Positives = 87/167 (52%)
Query: 366 LQRRIQHLAKATAN-TKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVA 424
LQ +Q+ + K P R +LFYGPPG GKT++A+ IA + ++ + G ++
Sbjct: 494 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 553
Query: 425 PLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSA---LNALLF 480
+ ++ + ++FD A+ + +LF DE D+ R + +A +A +N +L
Sbjct: 554 TMWFGESEANVRDVFDKARAAAP-CVLFFDELDSIAKARGG-SVGDAGGAADRVINQVLT 611
Query: 481 RTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPREEER 523
+ +++ ++ ATNRP +D A+ R+D++I PLP E R
Sbjct: 612 EMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASR 658
Score = 49 (22.3 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 550 LFKKQQQKITIK-DLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFR 608
+FK +K + DL N + A+ T GFSG ++ ++ Q A C L R
Sbjct: 661 IFKASLRKTPLSADLDLNFL---AKNTVGFSGADLTEIC---QRA------CKL---AIR 705
Query: 609 EVVEYKVEEHHQRIKLAAEGSQ 630
E +E ++ + +R +A G +
Sbjct: 706 ESIEREIRQEKERQDRSARGEE 727
Score = 41 (19.5 bits), Expect = 7.2e-11, Sum P(3) = 7.2e-11
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLMASVQAAV 594
L ++V +++ A + GF G ++A L + +AA+
Sbjct: 395 LGEDVDLEQVANECHGFVGADLASLCS--EAAI 425
Score = 39 (18.8 bits), Expect = 7.2e-11, Sum P(3) = 7.2e-11
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 608 REVVEYKVEEHHQRIKLAAEGSQPTK 633
+E+V+Y VE + +K G QP++
Sbjct: 495 QELVQYPVEHPEKYLKF---GMQPSR 517
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 194 (73.4 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 59/173 (34%), Positives = 88/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPF--------RNMLFYGPPGTGKTMVAREIARKSGLDYAM 417
L+++IQ L +A H+ F + +L YGPPGTGKT++AR A ++ +
Sbjct: 176 LEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK 235
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R +S E QR+
Sbjct: 236 LAGPQLVQMFIGDGAKLVRDAFQLAKE-KAPCIIFIDEIDAIGTKRFDSEVSGDREVQRT 294
Query: 474 ALNALLFRTGDQSRD-IVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G S + I ++ ATNR LD A+ + R+D IEFP P EE R
Sbjct: 295 MLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 347
Score = 40 (19.1 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 13/52 (25%), Positives = 30/52 (57%)
Query: 569 QEAARKTEGFSGREIAKLMASVQAAVYA-RPDCV-LDSQLFRE-VVEYKVEE 617
+E AR T+ F+G ++ + V+A + A R D ++ + F E +++ + ++
Sbjct: 367 EELARSTDDFNGAQLKAVC--VEAGMLALRRDATEVNHEDFNEGIIQVQAKK 416
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 191 (72.3 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 58/173 (33%), Positives = 87/173 (50%)
Query: 366 LQRRIQHLAKATANTKIHQAPFRNM--------LFYGPPGTGKTMVAREIARKSGLDYAM 417
L ++IQ L +A H+ F N+ L YGPPGTGKT++AR A ++ +
Sbjct: 156 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 215
Query: 418 MTGGDVAPLGAQAVTK-IHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRS 473
+ G + + K + + F AK+ K ++FIDE DA +R + E QR+
Sbjct: 216 LAGPQLVQMFIGDGAKLVRDAFSLAKE-KAPSIIFIDELDAIGNKRFDSEKAGDREVQRT 274
Query: 474 ALNALLFRTGDQ-SRDIVLVLATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
L L G Q + + ++ ATNR LD A+ + R+D IEFP+P EE R
Sbjct: 275 MLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 327
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 189 (71.6 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 54/169 (31%), Positives = 82/169 (48%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPGTGKTM+ + +A + + + G + LG + + ++F A++
Sbjct: 199 PPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLG-EGPRMVRDVFRMARE 257
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G +Q+ ++ +++ATNR
Sbjct: 258 NSPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQTSNVKVIMATNRAD 316
Query: 500 DLDSAIT--DRIDEVIEFPLPREE-ERFXXXXXXXXXXXCSDEGDSSSL 545
LD A+ R+D IEFP R+ ER S E D SL
Sbjct: 317 TLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSL 365
Score = 45 (20.9 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 195 EEQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEA 232
EE I+ +QR ++E + E R++++ G+ EA
Sbjct: 59 EEYIKDEQRSLKRELVRAQEEIKRIQSVPLVIGQFMEA 96
Score = 39 (18.8 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 196 EQIQAQQRLTEKERAEIERETIRVK 220
E I+ Q+ + E+ ++RE +R +
Sbjct: 53 EYIKLQEEYIKDEQRSLKRELVRAQ 77
Score = 38 (18.4 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 161 RLQTDH--EAQRRHNTELVKMQEE 182
+LQ ++ + QR ELV+ QEE
Sbjct: 56 KLQEEYIKDEQRSLKRELVRAQEE 79
>SGD|S000006377 [details] [associations]
symbol:VPS4 "AAA-ATPase involved in multivesicular body (MVB)
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA;IMP;IDA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA;IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=IMP] [GO:0016125 "sterol metabolic process"
evidence=IGI;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IDA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000006377
GO:GO:0005783 GO:GO:0005524 GO:GO:0042803 GO:GO:0016020
GO:GO:0015031 GO:GO:0005768 GO:GO:0051260 GO:GO:0016887
GO:GO:0010008 EMBL:BK006949 Pfam:PF04212 eggNOG:COG0464
InterPro:IPR015415 Pfam:PF09336 GO:GO:0016125 EMBL:U25842
SMART:SM00745 GO:GO:0032511 GO:GO:0045053 PDB:2V6X PDBsum:2V6X
GO:GO:0070676 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL OrthoDB:EOG4V1B8K EMBL:X92680 PIR:S59831
RefSeq:NP_015499.1 PDB:2QP9 PDB:2QPA PDB:2RKO PDB:3EIE PDB:3EIH
PDB:3MHV PDBsum:2QP9 PDBsum:2QPA PDBsum:2RKO PDBsum:3EIE
PDBsum:3EIH PDBsum:3MHV ProteinModelPortal:P52917 SMR:P52917
DIP:DIP-1746N IntAct:P52917 MINT:MINT-389240 STRING:P52917
PaxDb:P52917 PeptideAtlas:P52917 EnsemblFungi:YPR173C GeneID:856303
KEGG:sce:YPR173C CYGD:YPR173c EvolutionaryTrace:P52917
NextBio:981664 Genevestigator:P52917 GermOnline:YPR173C
Uniprot:P52917
Length = 437
Score = 196 (74.1 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 62/195 (31%), Positives = 101/195 (51%)
Query: 328 SGLLSQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPF 387
S +LS+ N ++ + AG G EA+K + ++ P + HL K N K P
Sbjct: 121 SAILSEKPN--VKWEDVAGLEGAKEALK---EAVILPV---KFPHLFKG--NRK----PT 166
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+L YGPPGTGK+ +A+ +A ++ + ++ D V+ ++ + ++F A+++K
Sbjct: 167 SGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKP 226
Query: 447 GLLLFIDEADAFLCERNSIHMSEAQRSALNALLFR---TGDQSRDIVLVLATNRPGDLDS 503
++ FIDE DA R SEA R LL + G+ S+ ++++ ATN P LDS
Sbjct: 227 SII-FIDEVDALTGTRGEGE-SEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDS 284
Query: 504 AITDRIDEVIEFPLP 518
AI R + I PLP
Sbjct: 285 AIRRRFERRIYIPLP 299
Score = 38 (18.4 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 575 TEGFSGREIA 584
TEG+SG +IA
Sbjct: 331 TEGYSGSDIA 340
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 192 (72.6 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 71/219 (32%), Positives = 98/219 (44%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTK-IHEIFDWAK 442
+AP + L YGPPGTGKT++AR A ++ + + G + + K + + F AK
Sbjct: 243 KAP-KGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAK 301
Query: 443 KSKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTGDQSRDIVLVLA-TNRP 498
+ K ++FIDE DA +R S E QR+ L L G S D + VLA TNR
Sbjct: 302 E-KAPSIIFIDELDAVGTKRFDSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRV 360
Query: 499 GDLDSAI--TDRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQ 556
LD A+ + R+D IEFPLP EE R D S+ W L + +
Sbjct: 361 DVLDPALLRSGRLDRKIEFPLPNEEARANILQIHSRKMTVED-----SVNWAELARSTDE 415
Query: 557 --KITIKDLSDNVIQEAARKTEGFSGRE-IAKLMASVQA 592
+K + A RK G E +A VQA
Sbjct: 416 FGGAQLKAVCVEAGMIALRKGHSKIGHENYVDAIAEVQA 454
>POMBASE|SPCC24B10.10c [details] [associations]
symbol:yta4 "mitochondrial outer membrane ATPase
Msp1/Yta4 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=ISS] [GO:0006626 "protein targeting to mitochondrion"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPCC24B10.10c
GO:GO:0005524 GO:GO:0006626 GO:GO:0005741 EMBL:CU329672
GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000225141
OMA:VINPLHI OrthoDB:EOG4BVW3J PIR:T50417 RefSeq:NP_588013.1
ProteinModelPortal:Q9P7J5 EnsemblFungi:SPCC24B10.10c.1
GeneID:2539116 KEGG:spo:SPCC24B10.10c NextBio:20800288
Uniprot:Q9P7J5
Length = 355
Score = 189 (71.6 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 53/141 (37%), Positives = 79/141 (56%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHE-IFDWAKKSKK 446
+ +L YGPPG GKTM+A+ +A++S + ++ G + K+ + +F A+K +
Sbjct: 126 KGLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEP 185
Query: 447 GLLLFIDEADAFLCERNSI-HMSEAQRSALNALLFR--TGDQSRDIVLVL-ATNRPGDLD 502
++FIDE D FL +R H + AQ A ++ QSR VLVL ATNRP D+D
Sbjct: 186 -TIIFIDEIDTFLRQRQRTDHEAMAQIKAEFMSMWDGLLSGQSR--VLVLGATNRPADID 242
Query: 503 SAITDRIDEVIEFPLPREEER 523
AI R+ +V PLP E+R
Sbjct: 243 EAIRRRMPKVFSIPLPNAEQR 263
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 189 (71.6 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 54/169 (31%), Positives = 80/169 (47%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPGTGKTM+ + +A + + + G + LG + + ++F A++
Sbjct: 188 PPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYLG-EGPRMVRDVFRLARE 246
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G DQ+ + +++ATNR
Sbjct: 247 NSPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRAD 305
Query: 500 DLDSAIT--DRIDEVIEFP-LPREEERFXXXXXXXXXXXCSDEGDSSSL 545
LD A+ R+D IEFP L ER + E D SL
Sbjct: 306 TLDPALLRPGRLDRKIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSL 354
Score = 44 (20.5 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 195 EEQIQAQQRLTEKERAEIERETIRVKAM 222
EE I+ +QR ++E + E R+K++
Sbjct: 48 EEYIKDEQRHLKRELVRAQEEVKRIKSV 75
Score = 42 (19.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 154 EDELARKRLQTDH-EAQRRH-NTELVKMQEE 182
E EL LQ ++ + ++RH ELV+ QEE
Sbjct: 38 EKELDLLLLQEEYIKDEQRHLKRELVRAQEE 68
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 189 (71.6 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 54/169 (31%), Positives = 80/169 (47%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPGTGKTM+ + +A + + + G + LG + + ++F A++
Sbjct: 188 PPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYLG-EGPRMVRDVFRLARE 246
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR L L G DQ+ + +++ATNR
Sbjct: 247 NSPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRAD 305
Query: 500 DLDSAIT--DRIDEVIEFP-LPREEERFXXXXXXXXXXXCSDEGDSSSL 545
LD A+ R+D IEFP L ER + E D SL
Sbjct: 306 TLDPALLRPGRLDRKIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSL 354
Score = 44 (20.5 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 195 EEQIQAQQRLTEKERAEIERETIRVKAM 222
EE I+ +QR ++E + E R+K++
Sbjct: 48 EEYIKDEQRHLKRELVRAQEEVKRIKSV 75
Score = 42 (19.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 154 EDELARKRLQTDH-EAQRRH-NTELVKMQEE 182
E EL LQ ++ + ++RH ELV+ QEE
Sbjct: 38 EKELDLLLLQEEYIKDEQRHLKRELVRAQEE 68
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 191 (72.3 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 50/145 (34%), Positives = 79/145 (54%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ S
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-S 266
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 267 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 326
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D +EF LP ++ R
Sbjct: 327 LDPALMRPGRLDRKVEFGLPDQDGR 351
>ZFIN|ZDB-GENE-060929-388 [details] [associations]
symbol:vps4a "vacuolar protein sorting 4a (yeast)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-060929-388
GO:GO:0005524 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 HOVERGEN:HBG057074 SMART:SM00745
CTD:27183 KO:K12196 EMBL:BC124488 IPI:IPI00804704
RefSeq:NP_001070077.1 UniGene:Dr.161728 ProteinModelPortal:Q08BZ6
SMR:Q08BZ6 STRING:Q08BZ6 PRIDE:Q08BZ6 GeneID:767670 KEGG:dre:767670
NextBio:20918061 Uniprot:Q08BZ6
Length = 440
Score = 182 (69.1 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 49/145 (33%), Positives = 79/145 (54%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDW 440
+ P+R +L +GPPGTGK+ +A+ +A ++ + ++ D+ LG ++ + +FD
Sbjct: 156 RTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFDL 214
Query: 441 AKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTG-DQSRDIVLVL-ATNRP 498
A++ K ++ FIDE D+ RN A+R L+ G + D +LVL ATN P
Sbjct: 215 ARQHKPSII-FIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGILVLGATNIP 273
Query: 499 GDLDSAITDRIDEVIEFPLPREEER 523
LD+AI R ++ I PLP E R
Sbjct: 274 WVLDAAIRRRFEKRIYIPLPEEPAR 298
Score = 53 (23.7 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIA 584
T L++ +++ ARKT+G+SG +I+
Sbjct: 309 TPHSLTEADLRQLARKTDGYSGADIS 334
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 190 (71.9 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 51/146 (34%), Positives = 78/146 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + L YGPPGTGKT++AR +A + ++ + + +G A I E+F++A+
Sbjct: 174 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA-RLIREMFNYARD 232
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++F+DE DA R S S E QR+ + L G D + +++ATNRP
Sbjct: 233 HQP-CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPD 291
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IE PLP E+ R
Sbjct: 292 SLDPALLRPGRLDRKIEIPLPNEQAR 317
>TAIR|locus:2168646 [details] [associations]
symbol:AT5G53540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
HOGENOM:HOG000225141 EMBL:AB015476 OMA:VINPLHI EMBL:AY058857
EMBL:BT002644 IPI:IPI00537305 RefSeq:NP_200166.1 UniGene:At.26650
ProteinModelPortal:Q9FJC9 SMR:Q9FJC9 PRIDE:Q9FJC9
EnsemblPlants:AT5G53540.1 GeneID:835436 KEGG:ath:AT5G53540
TAIR:At5g53540 InParanoid:Q9FJC9 PhylomeDB:Q9FJC9
ProtClustDB:CLSN2685508 Genevestigator:Q9FJC9 Uniprot:Q9FJC9
Length = 403
Score = 190 (71.9 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 62/185 (33%), Positives = 101/185 (54%)
Query: 346 GTAGPVEAIKNN-GDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVA 404
G+ G +E+IK ++++ P L+R + A K+ P + +L YGPPGTGKTM+A
Sbjct: 87 GSIGGLESIKQALYELVILP-LKR-----PELFAYGKL-LGPQKGVLLYGPPGTGKTMLA 139
Query: 405 REIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERN 463
+ IAR+S + + ++ + A + +F A K + ++ FIDE D+FL +R
Sbjct: 140 KAIARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAII-FIDEVDSFLGQRR 198
Query: 464 SIHMSEAQ---RSALNALL--FRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLP 518
S +EA ++ AL F T DQ+ ++++ ATNRP +LD AI R + E +P
Sbjct: 199 STD-NEAMSNMKTEFMALWDGFTT-DQNARVMVLAATNRPSELDEAILRRFPQSFEIGMP 256
Query: 519 REEER 523
+ER
Sbjct: 257 DCQER 261
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 190 (71.9 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 51/159 (32%), Positives = 79/159 (49%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPGTGKT+ AR +A ++ + + G + V + + ++F A+ S
Sbjct: 203 PPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMAR-S 261
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK ++F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 262 KKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 321
Query: 501 LDSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCS 537
LD A+ R+D +EF LP E R C+
Sbjct: 322 LDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCA 360
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 190 (71.9 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 56/182 (30%), Positives = 87/182 (47%)
Query: 373 LAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQA 430
L +A +I P R +L YGPPGTGKTM+ + +A + + + G + LG +
Sbjct: 192 LVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLG-EG 250
Query: 431 VTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQS 486
+ ++F A+++ ++ FIDE D+ +R E QR + L G DQS
Sbjct: 251 PRMVRDVFRLARENAPSII-FIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQS 309
Query: 487 RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPREE-ERFXXXXXXXXXXXCSDEGDSS 543
++ +++ATNR LD A+ R+D IEFP R+ ER + E D
Sbjct: 310 TNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEADLD 369
Query: 544 SL 545
SL
Sbjct: 370 SL 371
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 189 (71.6 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 52/146 (35%), Positives = 79/146 (54%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + +L YGPPGTGKT++AR IA ++ + + +G A I E+F++A++
Sbjct: 172 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESA-RLIREMFNYARE 230
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++F+DE DA R S S E QR+ + L G D + +++ATNRP
Sbjct: 231 HQP-CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPD 289
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IE PLP E+ R
Sbjct: 290 VLDPALLRPGRLDRKIEIPLPNEQSR 315
>UNIPROTKB|Q719N1 [details] [associations]
symbol:SPAST "Spastin" species:9823 "Sus scrofa"
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0005783 "endoplasmic
reticulum" evidence=ISS] [GO:0007109 "cytokinesis, completion of
separation" evidence=ISS] [GO:0001578 "microtubule bundle
formation" evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0034214 "protein hexamerization" evidence=ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0048487
"beta-tubulin binding" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0007109 GO:GO:0048487
GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0043014 SMART:SM00745 GO:GO:0034214
HOGENOM:HOG000225146 KO:K13254 HAMAP:MF_03021 CTD:6683
HOVERGEN:HBG108502 OrthoDB:EOG4NZTTF EMBL:AF540879
RefSeq:NP_998914.1 UniGene:Ssc.19685 STRING:Q719N1 GeneID:396584
KEGG:ssc:396584 Uniprot:Q719N1
Length = 613
Score = 190 (71.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 62/203 (30%), Positives = 103/203 (50%)
Query: 328 SGLLSQAMNKVIRNKTSA---GTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQ 384
S L + MN+++ N T+ AG A + +I++ PSL+ + T + +
Sbjct: 319 SNLANFIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELF--------TGL-R 369
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A++
Sbjct: 370 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARE 429
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR--DIVLVL-ATNRPGD 500
+ ++ FIDE D+ L ER ++R L+ G QS D VLV+ ATNRP +
Sbjct: 430 LQPSII-FIDEVDSLLRERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQE 488
Query: 501 LDSAITDRIDEVIEFPLPREEER 523
LD A+ R + + LP EE R
Sbjct: 489 LDEAVLRRFIKRVYVSLPNEETR 511
Score = 48 (22.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 549 HLFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
+L KQ +T K+L+ + AR T+G+SG ++ L
Sbjct: 517 NLLCKQGSPLTQKELA-----QLARLTDGYSGSDLTAL 549
>ZFIN|ZDB-GENE-040426-2331 [details] [associations]
symbol:spast "spastin" species:7955 "Danio rerio"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISS] [GO:0048675 "axon extension"
evidence=IGI;IMP] [GO:0031122 "cytoplasmic microtubule
organization" evidence=IMP] [GO:0015630 "microtubule cytoskeleton"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0051013 "microtubule severing"
evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IMP]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0007416 "synapse assembly"
evidence=IMP] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2331 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0043066 GO:GO:0051301 GO:GO:0051260
GO:GO:0005815 GO:GO:0007049 Pfam:PF04212 GO:GO:0045773 HSSP:Q01853
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0031122
GO:GO:0021955 GO:GO:0043014 GO:GO:0048676 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 GO:GO:0031117
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AY304504 EMBL:CU651563 EMBL:BC067715
IPI:IPI00497843 RefSeq:NP_998080.1 UniGene:Dr.30307
ProteinModelPortal:Q6NW58 SMR:Q6NW58 STRING:Q6NW58
Ensembl:ENSDART00000035150 GeneID:405851 KEGG:dre:405851
NextBio:20817813 Bgee:Q6NW58 Uniprot:Q6NW58
Length = 570
Score = 188 (71.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 49/144 (34%), Positives = 78/144 (54%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAK 442
+AP R +L +GPPG GKTM+A+ +A +S + ++ + + + + +F A+
Sbjct: 325 RAPARGLLLFGPPGNGKTMLAKAVAMESNATFFNISAATLTSKYVGEGEKLVRALFAVAR 384
Query: 443 KSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR--DIVLVL-ATNRPG 499
+ + ++ FIDE D+ LCER ++R L+ G QS + VLV+ ATNRP
Sbjct: 385 ELQPSII-FIDEIDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQ 443
Query: 500 DLDSAITDRIDEVIEFPLPREEER 523
+LD A+ R + I LP EE R
Sbjct: 444 ELDEAVLRRFAKRIYVALPTEETR 467
Score = 49 (22.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 563 LSDNVIQEAARKTEGFSGREIAKL 586
LS + + AR T+G+SG ++ L
Sbjct: 482 LSQKELSQLARLTDGYSGSDLTSL 505
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 193 (73.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 89/355 (25%), Positives = 153/355 (43%)
Query: 188 EQARRSTEEQIQAQQRLTEKERAEIERET-IRVKAMAEAEGRAHEAKLTEDH--NRRMLI 244
+Q+ EQ Q + E+E + ++ E KA+ + + + E + +D RR I
Sbjct: 22 QQSHEQQPEQPQETEEHHEEEPSRVDPEQEAHNKALNQFKRKLLEHRRYDDQLKQRRQNI 81
Query: 245 ---ERINGEREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGATALAAGIYTT----- 296
E++ + E + A+ + I E ++ L K ++ G+ +
Sbjct: 82 RDLEKLYDKTENDIKALQSIGQLIGEVMKEL--SEEKYIVKASSGPRYIVGVRNSVDRSK 139
Query: 297 -REGARVTWGYVNRILGQPSLIRESSIGKFPWSGLLSQAMNKVIRNKTSAGTAGPVEAIK 355
++G RVT + + L RE+ + + S ++ T G G E I+
Sbjct: 140 LKKGVRVTLD-ITTLTIMRILPRETDPLVY---NMTSFEQGEI----TFDGIGGLTEQIR 191
Query: 356 NNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDY 415
++I P L ++ P + +L YGPPGTGKT++A+ +A G ++
Sbjct: 192 ELREVIELP--------LKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANF 243
Query: 416 AMM-TGGDVAPLGAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQ 471
G V ++ I E+F +AK+ + ++F+DE DA R S S E Q
Sbjct: 244 IFSPASGIVDKYIGESARIIREMFAYAKEHEP-CIIFMDEVDAIGGRRFSEGTSADREIQ 302
Query: 472 RSALNALLFRTG-DQSRDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPREEER 523
R+ + L G D +++ATNRP LD A+ R+D +E PLP E R
Sbjct: 303 RTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGR 357
Score = 39 (18.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 550 LFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYARPD 599
+FK K+ K + + A + ++GF+G +I + +A +A D
Sbjct: 360 IFKIHTAKV--KKTGEFDFEAAVKMSDGFNGADIRN--CATEAGFFAIRD 405
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 196 (74.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 57/203 (28%), Positives = 103/203 (50%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKS 444
P + +LF+GPPGTGKT++A+ IA + ++ + G ++ + ++ + + +IFD A+ +
Sbjct: 530 PSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAA 589
Query: 445 KKGLLLFIDEADAFLCERN-SIHMSEAQRSALNALLFRT-GDQSRDIVLVL-ATNRPGDL 501
++F+DE D+ R S S +N LL G S+ V V+ ATNRP +
Sbjct: 590 AP-CVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQI 648
Query: 502 DSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSL-KWGHLFKKQQQKI 558
D A+ R+D++I PLP EE RF +++ D ++ K H F +
Sbjct: 649 DPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEF 708
Query: 559 TIKD-----LSDNVIQEAARKTE 576
++ + D++ ++ R+ E
Sbjct: 709 VVQRAVKLAIKDSIEEDIKRENE 731
Score = 195 (73.7 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 43/138 (31%), Positives = 83/138 (60%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKT++AR +A ++G + ++ G ++ + + ++ + + + F+ A+K+
Sbjct: 257 PPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 316
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSR-DIVLVLATNRPGDLD 502
++ FIDE D+ +R + E +R ++ LL G ++R ++V++ ATNRP +D
Sbjct: 317 SPAII-FIDEIDSIAPKREKTN-GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSID 374
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D ++ +P
Sbjct: 375 PALRRFGRFDREVDVGIP 392
Score = 47 (21.6 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 14/54 (25%), Positives = 32/54 (59%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLMA-SVQAAVYARPDCV-LDS-QLFREVVE 612
L+D+V +++ A +T G+ G ++A L + + + + D + LD ++ EV++
Sbjct: 410 LADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLD 463
Score = 45 (20.9 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQEESSIR 186
D +A KR +T+ E +RR ++L+ + + R
Sbjct: 327 DSIAPKREKTNGEVERRVVSQLLTLMDGMKAR 358
Score = 40 (19.1 bits), Expect = 9.4e-11, Sum P(3) = 9.4e-11
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 551 FKKQQQKITIKDLSDNV-IQEAARKTEGFSGREIAKLMASVQAAV 594
F Q ++ ++++V ++ A+ T GFSG A L VQ AV
Sbjct: 673 FSILQTQLRHTPVAEDVDLRAVAKATHGFSG---ADLEFVVQRAV 714
Score = 39 (18.8 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 247 INGEREKWLAAINTTFSHIEEGVRSL-LTDRNKLVMTVG 284
+ G+R K I T +E+GV + RN L + +G
Sbjct: 79 VKGKRRKDTVLIVLTDEEMEDGVARINRVVRNNLRVRLG 117
Score = 38 (18.4 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 11/52 (21%), Positives = 28/52 (53%)
Query: 110 LDVEKVHYEAIQSQVDVERQRKLAEEH----RNLVQQKAQARAQGLRNEDEL 157
L++ ++H + ++ DV+ ++ AE H +L ++A Q +R + ++
Sbjct: 398 LEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDM 449
>UNIPROTKB|Q5ZMI9 [details] [associations]
symbol:VPS4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032367 "intracellular cholesterol transport" evidence=IEA]
[GO:0032510 "endosome to lysosome transport via multivesicular body
sorting pathway" evidence=IEA] [GO:0033993 "response to lipid"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005774 GO:GO:0005764 GO:GO:0016887 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
Pfam:PF04212 GO:GO:0007032 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 GO:GO:0032510
KO:K12196 CTD:9525 OMA:AKCAEYL EMBL:AC159826 EMBL:AJ719395
IPI:IPI00582043 RefSeq:NP_001006378.2 UniGene:Gga.8210 SMR:Q5ZMI9
STRING:Q5ZMI9 Ensembl:ENSGALT00000021007 GeneID:420901
KEGG:gga:420901 InParanoid:Q5ZMI9 NextBio:20823751 Uniprot:Q5ZMI9
Length = 438
Score = 178 (67.7 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 48/146 (32%), Positives = 81/146 (55%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDW 440
+ P+R +L +GPPGTGK+ +A+ +A ++ + ++ D+ LG ++ + +F
Sbjct: 159 RTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLG-ESEKLVKNLFQL 217
Query: 441 AKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFR---TGDQSRDIVLVLATNR 497
A+++K ++ FIDE D+ LC S + SEA R L + G + I+++ ATN
Sbjct: 218 ARENKPSII-FIDEIDS-LCGSRSENESEAARRIKTEFLVQMQGVGVDNEGILVLGATNI 275
Query: 498 PGDLDSAITDRIDEVIEFPLPREEER 523
P LDSAI R ++ I PLP + R
Sbjct: 276 PWVLDSAIRRRFEKRIYIPLPEDHAR 301
Score = 51 (23.0 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 15/77 (19%), Positives = 36/77 (46%)
Query: 176 LVKMQEESSIRKEQARRSTEEQIQAQQRLTE--KERAEIERETIRVKAMAEAEGRAHEAK 233
+VK + + K+ R E + ++L E K+R + + ++ A+ +G + +
Sbjct: 41 VVKYETQGDKAKQSIRVKCAEYLDRAEKLKEYLKKREKTAPKPVKESGPADGKGNDSDGE 100
Query: 234 -LTEDHNRRMLIERING 249
+ED ++ L ++ G
Sbjct: 101 GESEDPEKKKLQNQLQG 117
Score = 42 (19.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 563 LSDNVIQEAARKTEGFSGREIA 584
L++ +E ++T+G+SG +I+
Sbjct: 316 LTEADYRELGKRTDGYSGADIS 337
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 190 (71.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 53/146 (36%), Positives = 78/146 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + +L YGPPGTGKT++AR +A G+++ + + +G A I E+F +AK+
Sbjct: 165 PPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARI-IREMFGYAKE 223
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++F+DE DA R S S E QR+ + L G D +++ATNRP
Sbjct: 224 HEP-CVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPD 282
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IE PLP E R
Sbjct: 283 TLDPALLRPGRLDRKIEIPLPNEVGR 308
Score = 39 (18.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 14/65 (21%), Positives = 30/65 (46%)
Query: 219 VKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVRSLLTDRNK 278
+K++ ++ G+ L + + R +++ +G R N SH+ +GVR L
Sbjct: 46 IKSL-QSVGQIIGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTL 104
Query: 279 LVMTV 283
+M +
Sbjct: 105 TIMRI 109
>TAIR|locus:2132922 [details] [associations]
symbol:AT4G28000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GO:GO:0017111 IPI:IPI00546324 RefSeq:NP_194529.4
UniGene:At.54531 ProteinModelPortal:F4JKF8 SMR:F4JKF8 PRIDE:F4JKF8
EnsemblPlants:AT4G28000.1 GeneID:828913 KEGG:ath:AT4G28000
OMA:GAVMNEL ArrayExpress:F4JKF8 Uniprot:F4JKF8
Length = 830
Score = 189 (71.6 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 51/143 (35%), Positives = 73/143 (51%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKS 444
P R +L +GPPGTGKTM+A+ IA ++G + ++ + + + +F A K
Sbjct: 551 PCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKV 610
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFR-TGDQSR--DIVLVLA-TNRPGD 500
++F+DE D+ L +R + EA R N + G S D +LVLA TNRP D
Sbjct: 611 SP-TIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMSNAGDRILVLAATNRPFD 669
Query: 501 LDSAITDRIDEVIEFPLPREEER 523
LD AI R + I LP E R
Sbjct: 670 LDEAIIRRFERRIMVGLPSVESR 692
Score = 52 (23.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 561 KDLSDNV-IQEAARKTEGFSGREIAKLMASVQ---AAVYARPDCVLDSQLF-REVVEYKV 615
K+ ++N+ QE A+ T+G+SG ++ + + +C+ D + RE E
Sbjct: 702 KEKTENLDFQELAQMTDGYSGSDLKNFCTTAAYRPVRELIKQECLKDQERRKREEAEKNS 761
Query: 616 EE 617
EE
Sbjct: 762 EE 763
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 193 (73.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 54/147 (36%), Positives = 82/147 (55%)
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
AP R +L YGPPGTGKTM+AR +A + G +++ G ++ + + ++ +IF A
Sbjct: 386 AP-RGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATL 444
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTG---DQSRDIVLVL-ATNRP 498
++ FIDE DA LC + SE ++ + +LL G + S VLVL ATNRP
Sbjct: 445 RHPSII-FIDELDA-LCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRP 502
Query: 499 GDLDSAIT--DRIDEVIEFPLPREEER 523
LD+A+ R D+ IE +P ++R
Sbjct: 503 QALDAALRRPGRFDKEIEIGIPNAQDR 529
Score = 153 (58.9 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 39/124 (31%), Positives = 65/124 (52%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVA-PLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPG KTM+A+ +A +SGL++ + G ++ ++ + E+F A+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREVFRKARAV 719
Query: 445 KKGLLLFIDEADAFLCERNSIHMSE--AQRSALNALLFRTG-DQSRDIVLVLATNRPGDL 501
++ F DE DA ER S + A R L G +Q +++ ++ ATNRP +
Sbjct: 720 APSIIFF-DELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRI 778
Query: 502 DSAI 505
D I
Sbjct: 779 DKII 782
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 193 (73.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 46/138 (33%), Positives = 80/138 (57%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPG GKTM+AR +A ++G + ++ G ++ + L ++ + + + F+ A+K+
Sbjct: 235 PPKGILLYGPPGCGKTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 294
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVL-ATNRPGDLD 502
++ FIDE D+ +R E +R ++ LL G +SR V+V+ ATNRP +D
Sbjct: 295 APSII-FIDEIDSIAPKREKTQ-GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSID 352
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D I+ +P
Sbjct: 353 PALRRFGRFDREIDITIP 370
Score = 183 (69.5 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 51/177 (28%), Positives = 90/177 (50%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L ++Q ++H K K P + +LFYGPPG GKT++A+ IA
Sbjct: 478 GGLEGVKRE----LRETVQYPVEHPEKFR---KFGMQPSKGVLFYGPPGCGKTLLAKAIA 530
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIH- 466
+ ++ + G ++ + ++ + E+FD A+++ +LF DE D+ R S
Sbjct: 531 NECQANFISIKGPELLTMWFGESEANVRELFDKARQAAP-CVLFFDELDSIARSRGSSQG 589
Query: 467 -MSEAQRSALNALLFRTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLP 518
A +N +L + +++ ++ ATNRP +D AI R+D++I PLP
Sbjct: 590 DAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 646
Score = 47 (21.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 563 LSDNVIQEA-ARKTEGFSGREIAKLMA-SVQAAVYARPDCV--LDSQLFREVVE-YKVEE 617
L + V EA A +T G+ G ++A L S + + D + D + E++E V +
Sbjct: 388 LDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLEDETISAEILESMSVTQ 447
Query: 618 HHQRIKL 624
H R L
Sbjct: 448 DHFRTAL 454
Score = 45 (20.9 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DE+ A KR +T E +RR ++L+ +
Sbjct: 271 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEVERRIVSQLLTLM 330
Query: 181 E 181
+
Sbjct: 331 D 331
Score = 41 (19.5 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 6/14 (42%), Positives = 12/14 (85%)
Query: 573 RKTEGFSGREIAKL 586
+KT+GFSG ++ ++
Sbjct: 675 QKTQGFSGADLTEI 688
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 188 (71.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 199 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 257
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 258 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 317
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 318 LDPALMRPGRLDRKIEFSLPDLEGR 342
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 187 (70.9 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 47/146 (32%), Positives = 76/146 (52%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPGTGKTM+ + +A + ++ + G + LG + + ++F A++
Sbjct: 167 PPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLG-EGPRMVRDVFRMARE 225
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++ FIDE DA +R E QR + L G DQ ++ +++ATNR
Sbjct: 226 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRAD 284
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEFP R+ +
Sbjct: 285 TLDPALLRPGRLDRKIEFPSYRDRRQ 310
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 187 (70.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 49/137 (35%), Positives = 78/137 (56%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGG--DVAPLGAQAVTKIHEIFDWAKKSK 445
+ +L GPPGTGKT++AR +A ++G+ + M+G D +G A ++ E+F+ A+ SK
Sbjct: 349 KGVLLVGPPGTGKTLLARAVAGEAGVPFFYMSGSEFDEVYVGVGA-KRVRELFNQAR-SK 406
Query: 446 KGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTG--DQSRDIVLVLATNRPGDLDS 503
++FIDE DA +RN + +++ LN LL QS ++++ ATN P LD
Sbjct: 407 SPAIIFIDELDAIGAKRNERDAAYVKQT-LNQLLTELDGFSQSTGVIILAATNYPELLDK 465
Query: 504 AIT--DRIDEVIEFPLP 518
A+T R D + LP
Sbjct: 466 ALTRPGRFDRKVVVDLP 482
Score = 53 (23.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 550 LFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYA 596
+ K + + I +D + AR T GFSG ++ L+ QAA++A
Sbjct: 490 ILKHHMKNVQIS--TDVDVAVIARGTSGFSGADLENLVN--QAAIFA 532
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 207 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 265
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 266 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 325
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 326 LDPALMRPGRLDRKIEFSLPDLEGR 350
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 266
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 267 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 326
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 327 LDPALMRPGRLDRKIEFSLPDLEGR 351
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 266
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 267 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 326
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 327 LDPALMRPGRLDRKIEFSLPDLEGR 351
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 266
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 267 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 326
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 327 LDPALMRPGRLDRKIEFSLPDLEGR 351
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 266
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 267 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 326
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 327 LDPALMRPGRLDRKIEFSLPDLEGR 351
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 266
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 267 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 326
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 327 LDPALMRPGRLDRKIEFSLPDLEGR 351
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 266
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 267 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 326
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 327 LDPALMRPGRLDRKIEFSLPDLEGR 351
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 266
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 267 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 326
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 327 LDPALMRPGRLDRKIEFSLPDLEGR 351
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 266
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 267 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 326
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 327 LDPALMRPGRLDRKIEFSLPDLEGR 351
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 209 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 267
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 268 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 327
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 328 LDPALMRPGRLDRKIEFSLPDLEGR 352
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 193 (73.0 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 54/147 (36%), Positives = 82/147 (55%)
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
AP R +L YGPPGTGKTM+AR +A + G +++ G ++ + + ++ +IF A
Sbjct: 386 AP-RGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATL 444
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTG---DQSRDIVLVL-ATNRP 498
++ FIDE DA LC + SE ++ + +LL G + S VLVL ATNRP
Sbjct: 445 RHPSII-FIDELDA-LCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRP 502
Query: 499 GDLDSAIT--DRIDEVIEFPLPREEER 523
LD+A+ R D+ IE +P ++R
Sbjct: 503 QALDAALRRPGRFDKEIEIGIPNAQDR 529
Score = 181 (68.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 47/139 (33%), Positives = 74/139 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVA-PLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPG KTM+A+ +A +SGL++ + G ++ ++ + EIF A+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 719
Query: 445 KKGLLLFIDEADAFLCERNSIHMSE--AQRSALNALLFRTG-DQSRDIVLVLATNRPGDL 501
++ F DE DA ER S + A R L G +Q +++ ++ ATNRP +
Sbjct: 720 APSIIFF-DELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRI 778
Query: 502 DSAIT--DRIDEVIEFPLP 518
D A+ RID +I PLP
Sbjct: 779 DKALMRPGRIDRIIYVPLP 797
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 168 (64.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 48/139 (34%), Positives = 80/139 (57%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPL--GAQAVTKIHEIFDWAKKSK 445
+ +L +G PGTGKT++AR IA ++G+ + ++G D + G A +++ ++F+ AKK+
Sbjct: 192 KGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGA-SRVRDLFEQAKKNA 250
Query: 446 KGLLLFIDEADAFLCERNS-IHMSEAQRS-ALNALLFRT-GDQSRD-IVLVLATNRPGDL 501
++FIDE DA +R + + +R LN LL G S + I+++ ATNRP L
Sbjct: 251 P-CIVFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDIL 309
Query: 502 DSAIT--DRIDE--VIEFP 516
D A+ R D V++ P
Sbjct: 310 DPALLRPGRFDRHIVVDTP 328
Score = 70 (29.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 552 KKQQQKITIKD--LSDNV-IQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFR 608
+K+ K+ +K L D+V + AR+T GF+G ++A ++ R V++ +
Sbjct: 333 RKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEME 392
Query: 609 EVVEYKVEEHHQRIKLAAE 627
E +E + ++ K+ +E
Sbjct: 393 EAIERVIAGPEKKSKVISE 411
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 168 (64.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 48/139 (34%), Positives = 80/139 (57%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPL--GAQAVTKIHEIFDWAKKSK 445
+ +L +G PGTGKT++AR IA ++G+ + ++G D + G A +++ ++F+ AKK+
Sbjct: 192 KGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGA-SRVRDLFEQAKKNA 250
Query: 446 KGLLLFIDEADAFLCERNS-IHMSEAQRS-ALNALLFRT-GDQSRD-IVLVLATNRPGDL 501
++FIDE DA +R + + +R LN LL G S + I+++ ATNRP L
Sbjct: 251 P-CIVFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDIL 309
Query: 502 DSAIT--DRIDE--VIEFP 516
D A+ R D V++ P
Sbjct: 310 DPALLRPGRFDRHIVVDTP 328
Score = 70 (29.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 552 KKQQQKITIKD--LSDNV-IQEAARKTEGFSGREIAKLMASVQAAVYARPDCVLDSQLFR 608
+K+ K+ +K L D+V + AR+T GF+G ++A ++ R V++ +
Sbjct: 333 RKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEME 392
Query: 609 EVVEYKVEEHHQRIKLAAE 627
E +E + ++ K+ +E
Sbjct: 393 EAIERVIAGPEKKSKVISE 411
>TAIR|locus:2034230 [details] [associations]
symbol:ERH3 "ECTOPIC ROOT HAIR 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IMP] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043622 "cortical microtubule organization" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0009832 GO:GO:0005874 GO:GO:0043622 GO:GO:0009825
GO:GO:0010091 EMBL:AC018848 KO:K07767 HAMAP:MF_03023
HOGENOM:HOG000225142 OMA:GVMQQIQ EMBL:AF358779 EMBL:AF359248
EMBL:AF048706 EMBL:AB044785 EMBL:AY059919 EMBL:BT000149
IPI:IPI00547205 PIR:B96835 RefSeq:NP_178151.1 UniGene:At.11879
ProteinModelPortal:Q9SEX2 SMR:Q9SEX2 IntAct:Q9SEX2 STRING:Q9SEX2
PaxDb:Q9SEX2 PRIDE:Q9SEX2 EnsemblPlants:AT1G80350.1 GeneID:844375
KEGG:ath:AT1G80350 GeneFarm:2769 TAIR:At1g80350 InParanoid:Q9SEX2
PhylomeDB:Q9SEX2 ProtClustDB:CLSN2691706 BRENDA:3.6.4.3
Genevestigator:Q9SEX2 GermOnline:AT1G80350 Uniprot:Q9SEX2
Length = 523
Score = 175 (66.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 48/149 (32%), Positives = 77/149 (51%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKS 444
P++ +L +GPPGTGKT++A+ +A + G + ++ +A ++ + +FD A+
Sbjct: 271 PWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAY 330
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTG---------DQSRDIVLVLA- 494
+ FIDE D+ R E+ R + LL + D SR IV+VLA
Sbjct: 331 APSTI-FIDEIDSLCNSRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAA 389
Query: 495 TNRPGDLDSAITDRIDEVIEFPLPREEER 523
TN P D+D A+ R+++ I PLP E R
Sbjct: 390 TNFPWDIDEALRRRLEKRIYIPLPDFESR 418
Score = 60 (26.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIAKL 586
T++ SD I++ AR+TEG+SG ++ +
Sbjct: 428 TVEVASDVNIEDVARRTEGYSGDDLTNV 455
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 188 (71.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 250 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 308
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 309 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 368
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 369 LDPALMRPGRLDRKIEFSLPDLEGR 393
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMAR-T 266
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 267 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 326
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 327 LDPALMRPGRLDRKIEFSLPDLEGR 351
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 51/145 (35%), Positives = 78/145 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L +GPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMAR-T 266
Query: 445 KKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R + +E QR+ L + G D +I +++ATNRP
Sbjct: 267 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 326
Query: 501 LDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IEF LP E R
Sbjct: 327 LDPALMRPGRLDRKIEFSLPDLEGR 351
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 190 (71.9 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 43/142 (30%), Positives = 80/142 (56%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKK 446
+ +L YGPPG GKT++A+ IA + ++ + G ++ + ++ + ++FD A+ +
Sbjct: 969 KGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASP 1028
Query: 447 GLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTG--DQSRDIVLVLATNRPGDLDSA 504
++F DE D+ ERNS ++A +N +L ++ + I ++ ATNRP LD A
Sbjct: 1029 -CIIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKA 1087
Query: 505 IT--DRIDEVIEFPLPREEERF 524
+T R+D++I LP + R+
Sbjct: 1088 LTRPGRLDKLIYISLPDLKSRY 1109
Score = 177 (67.4 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 50/146 (34%), Positives = 84/146 (57%)
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAK 442
AP + +L +G PGTGKT +A+ IA +S ++ G ++ +G ++ K+ +IF A
Sbjct: 560 AP-KGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIG-ESEQKLRKIFKKAS 617
Query: 443 KSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVLA-TNRPGD 500
+ K ++FIDE D+ +R+ + +E ++ ++ LL G + + VLVLA TNRP
Sbjct: 618 E-KTPCIIFIDEIDSIANKRSKSN-NELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNS 675
Query: 501 LDSAIT--DRIDEVIEFPLPREEERF 524
+D A+ R D IE P+P E+ R+
Sbjct: 676 IDPALRRFGRFDREIEIPVPDEQGRY 701
Score = 60 (26.2 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLMAS-VQAAV 594
L+++V I + A++TEGFSG +I L S V A+
Sbjct: 1121 LNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAI 1154
Score = 53 (23.7 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 17/71 (23%), Positives = 36/71 (50%)
Query: 568 IQEAARKTEGFSGREIAKLMASVQAAVYARPDCV----LDSQLFREVVEYKVEEHHQRIK 623
+++ A++ G+ G ++A+L +AA+ + + LD + F E ++ V+E + +
Sbjct: 719 LRKIAKECHGYVGADLAQLC--FEAAIQCIKEHIHFLDLDEEDFIEFMKISVDEDKKNMG 776
Query: 624 LAAEGSQPTKN 634
GS T N
Sbjct: 777 NEPYGSSHTNN 787
Score = 38 (18.4 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 13/57 (22%), Positives = 24/57 (42%)
Query: 88 SSRHAREAFDIMRKQEQTRLAELDVEKVHYEAIQSQV---DVERQRKLAEEHRNLVQ 141
S E F + + Q LAE +++ YE + D+ +K + R L++
Sbjct: 488 SEESENEEFGCIGEHSQLTLAEEYLKREDYEENNDDITYEDLGGMKKQLNKIRELIE 544
Score = 38 (18.4 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 16/114 (14%), Positives = 45/114 (39%)
Query: 128 RQRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESSIRK 187
R+ LA ++ +K + + + + + + +H H ++ ++S+
Sbjct: 77 RKNPLASISTSITTKKLENQKKKTNKNESYSNVNDKYEHNNNTAHFVQINYKNDQSNDTL 136
Query: 188 EQARRSTEEQIQAQ-QRLTEKE-RAEIERETIRVKAMAEAEGRAHEAKLTEDHN 239
+ + E ++ + L E + EI T ++ + + + K+T +N
Sbjct: 137 STYKNNNEMTVEGKPNNLASGEGKKEIHNTTQKI--LEKVDYFKEREKITNSYN 188
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 190 (71.9 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 43/142 (30%), Positives = 80/142 (56%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKK 446
+ +L YGPPG GKT++A+ IA + ++ + G ++ + ++ + ++FD A+ +
Sbjct: 969 KGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASP 1028
Query: 447 GLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTG--DQSRDIVLVLATNRPGDLDSA 504
++F DE D+ ERNS ++A +N +L ++ + I ++ ATNRP LD A
Sbjct: 1029 -CIIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKA 1087
Query: 505 IT--DRIDEVIEFPLPREEERF 524
+T R+D++I LP + R+
Sbjct: 1088 LTRPGRLDKLIYISLPDLKSRY 1109
Score = 177 (67.4 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 50/146 (34%), Positives = 84/146 (57%)
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAK 442
AP + +L +G PGTGKT +A+ IA +S ++ G ++ +G ++ K+ +IF A
Sbjct: 560 AP-KGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIG-ESEQKLRKIFKKAS 617
Query: 443 KSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVLA-TNRPGD 500
+ K ++FIDE D+ +R+ + +E ++ ++ LL G + + VLVLA TNRP
Sbjct: 618 E-KTPCIIFIDEIDSIANKRSKSN-NELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNS 675
Query: 501 LDSAIT--DRIDEVIEFPLPREEERF 524
+D A+ R D IE P+P E+ R+
Sbjct: 676 IDPALRRFGRFDREIEIPVPDEQGRY 701
Score = 60 (26.2 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKLMAS-VQAAV 594
L+++V I + A++TEGFSG +I L S V A+
Sbjct: 1121 LNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAI 1154
Score = 53 (23.7 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 17/71 (23%), Positives = 36/71 (50%)
Query: 568 IQEAARKTEGFSGREIAKLMASVQAAVYARPDCV----LDSQLFREVVEYKVEEHHQRIK 623
+++ A++ G+ G ++A+L +AA+ + + LD + F E ++ V+E + +
Sbjct: 719 LRKIAKECHGYVGADLAQLC--FEAAIQCIKEHIHFLDLDEEDFIEFMKISVDEDKKNMG 776
Query: 624 LAAEGSQPTKN 634
GS T N
Sbjct: 777 NEPYGSSHTNN 787
Score = 38 (18.4 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 13/57 (22%), Positives = 24/57 (42%)
Query: 88 SSRHAREAFDIMRKQEQTRLAELDVEKVHYEAIQSQV---DVERQRKLAEEHRNLVQ 141
S E F + + Q LAE +++ YE + D+ +K + R L++
Sbjct: 488 SEESENEEFGCIGEHSQLTLAEEYLKREDYEENNDDITYEDLGGMKKQLNKIRELIE 544
Score = 38 (18.4 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 16/114 (14%), Positives = 45/114 (39%)
Query: 128 RQRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESSIRK 187
R+ LA ++ +K + + + + + + +H H ++ ++S+
Sbjct: 77 RKNPLASISTSITTKKLENQKKKTNKNESYSNVNDKYEHNNNTAHFVQINYKNDQSNDTL 136
Query: 188 EQARRSTEEQIQAQ-QRLTEKE-RAEIERETIRVKAMAEAEGRAHEAKLTEDHN 239
+ + E ++ + L E + EI T ++ + + + K+T +N
Sbjct: 137 STYKNNNEMTVEGKPNNLASGEGKKEIHNTTQKI--LEKVDYFKEREKITNSYN 188
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 49/140 (35%), Positives = 75/140 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 210 PPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 268
Query: 445 KKGLLLFIDEADAFLCERNSIHM---SEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R +E QR+ L + G D +I +++ATNRP
Sbjct: 269 KKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 328
Query: 501 LDSAIT--DRIDEVIEFPLP 518
LD A+ R+D +EF LP
Sbjct: 329 LDPALMRPGRLDRKVEFALP 348
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 49/140 (35%), Positives = 75/140 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPGTGKT+ AR +A ++ + + G + V + + E+F+ A+ +
Sbjct: 210 PPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR-T 268
Query: 445 KKGLLLFIDEADAFLCERNSIHM---SEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
KK L+F DE DA R +E QR+ L + G D +I +++ATNRP
Sbjct: 269 KKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 328
Query: 501 LDSAIT--DRIDEVIEFPLP 518
LD A+ R+D +EF LP
Sbjct: 329 LDPALMRPGRLDRKVEFALP 348
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 186 (70.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 49/142 (34%), Positives = 77/142 (54%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 178 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAP 237
Query: 447 GLLLFIDEADAFLCER--NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLDS 503
++ F+DE D+ R SE QR+ L L G + +++I +++ATNR LD
Sbjct: 238 SII-FMDEIDSIGSARLETGTGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQ 296
Query: 504 AIT--DRIDEVIEFPLPREEER 523
A+ RID IEFP P EE R
Sbjct: 297 ALLRPGRIDRKIEFPPPNEEAR 318
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 186 (70.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 52/146 (35%), Positives = 78/146 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + +L YGPPGTGKT++AR IA ++ + + +G A I E+F +A+
Sbjct: 173 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESA-RLIREMFGYARD 231
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++F+DE DA R S S E QR+ + L G D+ + +++ATNRP
Sbjct: 232 HQP-CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPD 290
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D IE PLP E+ R
Sbjct: 291 VLDPALLRPGRLDRKIEIPLPNEQAR 316
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 191 (72.3 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 54/147 (36%), Positives = 82/147 (55%)
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
AP R +L YGPPGTGKTM+AR +A + G +++ G ++ + + K+ +IF A
Sbjct: 386 AP-RGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATL 444
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTG---DQSRDIVLVL-ATNRP 498
++ FIDE DA LC + +E ++ + +LL G + S VLVL ATNRP
Sbjct: 445 RHPSII-FIDELDA-LCPKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRP 502
Query: 499 GDLDSAIT--DRIDEVIEFPLPREEER 523
LD+A+ R D+ IE +P ++R
Sbjct: 503 HALDAALRRPGRFDKEIEIGVPNAQDR 529
Score = 182 (69.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 46/139 (33%), Positives = 73/139 (52%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVA-PLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPG KTM+A+ +A +SGL++ + G ++ ++ + E F A+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAV 719
Query: 445 KKGLLLFIDEADAFLCER-NSIHMSEAQRSALNALLFRTG--DQSRDIVLVLATNRPGDL 501
++ F DE DA ER +S+ L LL +Q +D+ ++ ATNRP +
Sbjct: 720 APSIIFF-DELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRI 778
Query: 502 DSAIT--DRIDEVIEFPLP 518
D A+ RID +I PLP
Sbjct: 779 DKALMRPGRIDRIIYVPLP 797
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 186 (70.5 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 54/150 (36%), Positives = 77/150 (51%)
Query: 381 KIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTK-IHEIFD 439
K+ P + L +GPPGTGKT++AR A +S + + + + K + + F
Sbjct: 213 KLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFA 272
Query: 440 WAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTGDQSRDIVLVLA-T 495
AK+ K ++FIDE DA +R + E QR+ L L G S D V V+A T
Sbjct: 273 LAKE-KSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAAT 331
Query: 496 NRPGDLDSAI--TDRIDEVIEFPLPREEER 523
NR LD A+ + R+D +EFPLP EE R
Sbjct: 332 NRVDTLDPALLRSGRLDRKLEFPLPNEEAR 361
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 190 (71.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 52/147 (35%), Positives = 82/147 (55%)
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
+P R +L YGPPGTGKTM+AR +A + G +++ G ++ + + ++ +IF A
Sbjct: 379 SPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATL 438
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTG---DQSRDIVLVL-ATNRP 498
++ FIDE DA LC + +E ++ + +LL G + S VLVL ATNRP
Sbjct: 439 RHPSII-FIDELDA-LCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRP 496
Query: 499 GDLDSAIT--DRIDEVIEFPLPREEER 523
LD+A+ R D+ IE +P ++R
Sbjct: 497 HALDAALRRPGRFDKEIEIGVPNAQDR 523
Score = 159 (61.0 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 41/130 (31%), Positives = 68/130 (52%)
Query: 380 TKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVA-PLGAQAVTKIHEIF 438
T++ P + +L YGPPG KTM+A+ +A +SGL++ + G ++ ++ + EIF
Sbjct: 648 TQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIF 707
Query: 439 DWAKKSKKGLLLFIDEADAFLCERNSIHMSE--AQRSALNALLFRTG-DQSRDIVLVLAT 495
A+ ++ F DE DA ER S + A R L G +Q +D+ ++ AT
Sbjct: 708 RKARAVAPSIIFF-DELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAAT 766
Query: 496 NRPGDLDSAI 505
NRP +D +
Sbjct: 767 NRPDRIDKEL 776
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 197 (74.4 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 45/138 (32%), Positives = 82/138 (59%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L +GPPGTGKT++AR +A ++G + ++ G +V + + ++ + + + F+ +K+
Sbjct: 243 PPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKN 302
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSR-DIVLVLATNRPGDLD 502
+ +L FIDE DA +R + E +R ++ LL G + R ++V++ ATNRP +D
Sbjct: 303 QPAIL-FIDEIDAIAPKREKTN-GEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSID 360
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D I+ +P
Sbjct: 361 GALRRFGRFDREIDIGIP 378
Score = 174 (66.3 bits), Expect = 7.2e-09, Sum P(4) = 7.2e-09
Identities = 47/167 (28%), Positives = 84/167 (50%)
Query: 366 LQRRIQHLAKATAN-TKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVA 424
LQ +Q+ + K P R +LFYGPPG GKT++A+ IA + ++ + G ++
Sbjct: 495 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 554
Query: 425 PLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMSE---AQRSALNALLF 480
+ ++ + ++FD A+ + +LF DE D+ R + A +N +L
Sbjct: 555 TMWFGESEANVRDVFDKARAAAP-CVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLT 613
Query: 481 RTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPREEER 523
+ +++ ++ ATNRP +D A+ R+D++I PLP E R
Sbjct: 614 EMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASR 660
Score = 43 (20.2 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKL 586
L+D+V +++ A + GF G ++A L
Sbjct: 396 LADDVDLEQIANECHGFVGADLASL 420
Score = 43 (20.2 bits), Expect = 7.2e-09, Sum P(4) = 7.2e-09
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQE 181
D +A KR +T+ E +RR ++L+ + +
Sbjct: 313 DAIAPKREKTNGEVERRIVSQLLTLMD 339
Score = 41 (19.5 bits), Expect = 7.2e-09, Sum P(4) = 7.2e-09
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 196 EQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERIN 248
+QI+ + L + E +I+ E + A+ R + K + R ++E N
Sbjct: 427 QQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPN 479
Score = 39 (18.8 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 608 REVVEYKVEEHHQRIKLAAEGSQPTK 633
+E+V+Y VE + +K G QP++
Sbjct: 496 QELVQYPVEHPEKYLKF---GMQPSR 518
Score = 37 (18.1 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T GFSG ++ ++
Sbjct: 683 AKNTVGFSGADLTEI 697
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 197 (74.4 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 45/138 (32%), Positives = 82/138 (59%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L +GPPGTGKT++AR +A ++G + ++ G +V + + ++ + + + F+ +K+
Sbjct: 243 PPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKN 302
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSR-DIVLVLATNRPGDLD 502
+ +L FIDE DA +R + E +R ++ LL G + R ++V++ ATNRP +D
Sbjct: 303 QPAIL-FIDEIDAIAPKREKTN-GEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSID 360
Query: 503 SAIT--DRIDEVIEFPLP 518
A+ R D I+ +P
Sbjct: 361 GALRRFGRFDREIDIGIP 378
Score = 174 (66.3 bits), Expect = 7.2e-09, Sum P(4) = 7.2e-09
Identities = 47/167 (28%), Positives = 84/167 (50%)
Query: 366 LQRRIQHLAKATAN-TKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVA 424
LQ +Q+ + K P R +LFYGPPG GKT++A+ IA + ++ + G ++
Sbjct: 495 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 554
Query: 425 PLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHMSE---AQRSALNALLF 480
+ ++ + ++FD A+ + +LF DE D+ R + A +N +L
Sbjct: 555 TMWFGESEANVRDVFDKARAAAP-CVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLT 613
Query: 481 RTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPREEER 523
+ +++ ++ ATNRP +D A+ R+D++I PLP E R
Sbjct: 614 EMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASR 660
Score = 43 (20.2 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 563 LSDNV-IQEAARKTEGFSGREIAKL 586
L+D+V +++ A + GF G ++A L
Sbjct: 396 LADDVDLEQIANECHGFVGADLASL 420
Score = 43 (20.2 bits), Expect = 7.2e-09, Sum P(4) = 7.2e-09
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 155 DELARKRLQTDHEAQRRHNTELVKMQE 181
D +A KR +T+ E +RR ++L+ + +
Sbjct: 313 DAIAPKREKTNGEVERRIVSQLLTLMD 339
Score = 41 (19.5 bits), Expect = 7.2e-09, Sum P(4) = 7.2e-09
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 196 EQIQAQQRLTEKERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERIN 248
+QI+ + L + E +I+ E + A+ R + K + R ++E N
Sbjct: 427 QQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPN 479
Score = 39 (18.8 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 608 REVVEYKVEEHHQRIKLAAEGSQPTK 633
+E+V+Y VE + +K G QP++
Sbjct: 496 QELVQYPVEHPEKYLKF---GMQPSR 518
Score = 37 (18.1 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T GFSG ++ ++
Sbjct: 683 AKNTVGFSGADLTEI 697
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 198 (74.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 67/234 (28%), Positives = 114/234 (48%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPL--GAQAVTKIHEIFDWAKKSK 445
R + GPPGTGKT++A+ A ++G+ + ++G + + G A +++ ++F A++
Sbjct: 321 RGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGA-SRVRDLFKTAREMA 379
Query: 446 KGLLLFIDEADAFLCERNSIHM--SEAQRSALNALLFRT-GDQSRDIVLVLA-TNRPGDL 501
++ F+DE DA ER + M ++ + + LN LL G + D V+VLA TNRP L
Sbjct: 380 PAII-FVDEIDAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDIL 438
Query: 502 DSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKIT 559
D A+ R D I +P E R D + + F K QQ +
Sbjct: 439 DKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQ-LK 497
Query: 560 IKDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYARPDC-VLDSQLFREVVE 612
+++ + + A T GF+G +IA + A + AR D +D+ F + +E
Sbjct: 498 NEEI-EKLAGRLAALTPGFAGADIANC-CNEGALIAAREDAPAVDTYHFEQAIE 549
Score = 39 (18.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 31/147 (21%), Positives = 58/147 (39%)
Query: 153 NEDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEI 212
N D +K DHE ++E ++++ +EQ R +++ A+ T + +I
Sbjct: 48 NNDN--KKSNNNDHEK----DSERKPKKDQNKDEEEQLREELKKKFAAKHPGTNPDNLKI 101
Query: 213 ERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVRSL 272
+ +R + LT LI R + + L + ++IE+G+ +
Sbjct: 102 YKFDLRT--LGNYVLLFGSTILTF-----YLINRTSESEIQQLTFQDFITNYIEKGLVTK 154
Query: 273 LTDRNKLVMTVGGATALAAGIYTTREG 299
LT NK V+ + I R G
Sbjct: 155 LTVVNKAVVEAELIPGAVSNISHNRNG 181
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 198 (74.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 67/234 (28%), Positives = 114/234 (48%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPL--GAQAVTKIHEIFDWAKKSK 445
R + GPPGTGKT++A+ A ++G+ + ++G + + G A +++ ++F A++
Sbjct: 321 RGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGA-SRVRDLFKTAREMA 379
Query: 446 KGLLLFIDEADAFLCERNSIHM--SEAQRSALNALLFRT-GDQSRDIVLVLA-TNRPGDL 501
++ F+DE DA ER + M ++ + + LN LL G + D V+VLA TNRP L
Sbjct: 380 PAII-FVDEIDAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDIL 438
Query: 502 DSAIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKIT 559
D A+ R D I +P E R D + + F K QQ +
Sbjct: 439 DKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQ-LK 497
Query: 560 IKDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYARPDC-VLDSQLFREVVE 612
+++ + + A T GF+G +IA + A + AR D +D+ F + +E
Sbjct: 498 NEEI-EKLAGRLAALTPGFAGADIANC-CNEGALIAAREDAPAVDTYHFEQAIE 549
Score = 39 (18.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 31/147 (21%), Positives = 58/147 (39%)
Query: 153 NEDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEI 212
N D +K DHE ++E ++++ +EQ R +++ A+ T + +I
Sbjct: 48 NNDN--KKSNNNDHEK----DSERKPKKDQNKDEEEQLREELKKKFAAKHPGTNPDNLKI 101
Query: 213 ERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWLAAINTTFSHIEEGVRSL 272
+ +R + LT LI R + + L + ++IE+G+ +
Sbjct: 102 YKFDLRT--LGNYVLLFGSTILTF-----YLINRTSESEIQQLTFQDFITNYIEKGLVTK 154
Query: 273 LTDRNKLVMTVGGATALAAGIYTTREG 299
LT NK V+ + I R G
Sbjct: 155 LTVVNKAVVEAELIPGAVSNISHNRNG 181
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 182 (69.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 52/146 (35%), Positives = 76/146 (52%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + +L YGPPGTGKT++AR +A ++ + + +G A I E+F +AK+
Sbjct: 170 PPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAIVDKYIGESA-RLIREMFGYAKE 228
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPG 499
+ ++F+DE DA R S S E QR+ + L G D +++ATNRP
Sbjct: 229 HEP-CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPD 287
Query: 500 DLDSAI--TDRIDEVIEFPLPREEER 523
LD A+ R+D IE PLP E R
Sbjct: 288 TLDPALLRAGRLDRKIEIPLPNEVGR 313
Score = 45 (20.9 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 95 AFDIMRKQ--EQTRLAELDVEK--VHYEAIQSQV-DVERQRKLAEEHRNLVQQKAQARAQ 149
A D R+Q E+ + + LD+ + +A++ + D++R+ ++EE+ +Q Q +
Sbjct: 4 AVDPEREQALEEYKRSLLDLREWEAKLKALRMGIKDLQREFDISEENIKALQSVGQIIGE 63
Query: 150 GLRNEDE 156
L+ DE
Sbjct: 64 VLKQLDE 70
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 185 (70.2 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 51/146 (34%), Positives = 78/146 (53%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKKSK 445
+ +L YGPPGTGKT++AR +A + + ++G ++ +G + + E+F A++
Sbjct: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG-EGSRMVRELFVMAREHA 254
Query: 446 KGLLLFIDEADAFLCERNSIHM----SEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
++ F+DE D+ R SE QR+ L L G + S I +++ATNR
Sbjct: 255 PSII-FMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDI 313
Query: 501 LDSAIT--DRIDEVIEFPLPREEERF 524
LD A+ RID IEFP P EE RF
Sbjct: 314 LDQALLRPGRIDRKIEFPNPNEESRF 339
Score = 43 (20.2 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 127 ERQRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESSI 185
E QR+L ++ NL + +A+ L + + R+ LQ E + E+VK+ ++ +
Sbjct: 42 ELQRQLRQKTNNL--NRLEAQRNELNSRVRMLREELQLLQEPGS-YVGEVVKVMGKNKV 97
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 189 (71.6 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 47/147 (31%), Positives = 85/147 (57%)
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKK 443
+P R +L YGPPGTGKT++A+ IA + G ++ G ++ + ++ +++ +IF A
Sbjct: 350 SPPRGVLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASL 409
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQR---SALNALLFRTGDQSRD--IVLVLATNRP 498
+ ++ FIDE DA LC + +E ++ ++L L+ G + + +V++ ATNRP
Sbjct: 410 RRPSII-FIDELDA-LCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRP 467
Query: 499 GDLDSAIT--DRIDEVIEFPLPREEER 523
LD+A+ R D+ IE +P ++R
Sbjct: 468 HALDAALRRPGRFDKEIEIGIPNAQDR 494
Score = 126 (49.4 bits), Expect = 0.00021, P = 0.00021
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVA-PLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPG KTM+A+ +A +SGL++ + G ++ ++ + EIF A+
Sbjct: 625 PPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARMV 684
Query: 445 KKGLLLFIDEADAFLCERNS 464
+L F DE DA ER +
Sbjct: 685 SPSILFF-DEIDALAVERGN 703
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 185 (70.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 51/146 (34%), Positives = 78/146 (53%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKKSK 445
+ +L YGPPGTGKT++AR +A + + ++G ++ +G + + E+F A++
Sbjct: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG-EGSRMVRELFVMAREHA 254
Query: 446 KGLLLFIDEADAFLCERNSIHM----SEAQRSALNALLFRTG-DQSRDIVLVLATNRPGD 500
++ F+DE D+ R SE QR+ L L G + S I +++ATNR
Sbjct: 255 PSII-FMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDI 313
Query: 501 LDSAIT--DRIDEVIEFPLPREEERF 524
LD A+ RID IEFP P EE RF
Sbjct: 314 LDQALLRPGRIDRKIEFPNPNEESRF 339
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 187 (70.9 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 54/183 (29%), Positives = 95/183 (51%)
Query: 349 GPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIA 408
G +E +K L +Q ++H K K P + +LFYGPPG GKT++A+ IA
Sbjct: 212 GGLEDVKRE----LQELVQYPVEHPDKFL---KFGMTPSKGVLFYGPPGCGKTLLAKAIA 264
Query: 409 RKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSIHM 467
+ ++ + G ++ + ++ + EIFD A+++ +LF DE D+ R ++
Sbjct: 265 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFDELDSIAKARGG-NI 322
Query: 468 SEAQRSA---LNALLFRTGDQS--RDIVLVLATNRPGDLDSAIT--DRIDEVIEFPLPRE 520
+ +A +N +L S +++ ++ ATNRP +D AI R+D++I PLP E
Sbjct: 323 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 382
Query: 521 EER 523
+ R
Sbjct: 383 KSR 385
Score = 46 (21.3 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 127 ERQRKLA-EEHRNLVQ--QKAQARAQGLRNEDEL---ARKRLQTDHEAQRRHNTELVKMQ 180
E KLA E NL + ++A+ A + DEL A KR +T E +RR ++L+ +
Sbjct: 5 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 64
Query: 181 E 181
+
Sbjct: 65 D 65
Score = 38 (18.4 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 572 ARKTEGFSGREIAKL 586
A+ T GFSG ++ ++
Sbjct: 408 AKMTNGFSGADLTEI 422
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 185 (70.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 55/152 (36%), Positives = 79/152 (51%)
Query: 379 NTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTK-IHEI 437
N IH P + +L YGPPGTGKTM+AR +A ++ + + G + + K + +
Sbjct: 205 NLGIH--PPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDA 262
Query: 438 FDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTGDQSRD-IVLVL 493
F AK+ K ++FIDE DA +R + E QR+ L L G Q D I ++
Sbjct: 263 FALAKE-KAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIA 321
Query: 494 ATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
ATNR LD A+ + R+D IE P P E+ R
Sbjct: 322 ATNRIDVLDPALLRSGRLDRKIELPHPNEDAR 353
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 185 (70.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 55/152 (36%), Positives = 79/152 (51%)
Query: 379 NTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTK-IHEI 437
N IH P + +L YGPPGTGKTM+AR +A ++ + + G + + K + +
Sbjct: 205 NLGIH--PPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDA 262
Query: 438 FDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTGDQSRD-IVLVL 493
F AK+ K ++FIDE DA +R + E QR+ L L G Q D I ++
Sbjct: 263 FALAKE-KAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIA 321
Query: 494 ATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
ATNR LD A+ + R+D IE P P E+ R
Sbjct: 322 ATNRIDVLDPALLRSGRLDRKIELPHPNEDAR 353
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 184 (69.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 49/143 (34%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYA-MMTGGDVAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A ++ ++ V ++ I E+F++AK+ +
Sbjct: 172 KGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQP 231
Query: 447 GLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++F+DE DA R S S E QR+ + L G ++ ++ +++ATNRP LD
Sbjct: 232 -CIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLD 290
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
A+ R+D IE PLP E R
Sbjct: 291 PALVRPGRLDRKIEIPLPNETAR 313
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 184 (69.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 49/143 (34%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYA-MMTGGDVAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A ++ ++ V ++ I E+F++AK+ +
Sbjct: 172 KGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQP 231
Query: 447 GLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++F+DE DA R S S E QR+ + L G ++ ++ +++ATNRP LD
Sbjct: 232 -CIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLD 290
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
A+ R+D IE PLP E R
Sbjct: 291 PALVRPGRLDRKIEIPLPNETAR 313
>FB|FBgn0028868 [details] [associations]
symbol:CG4701 species:7227 "Drosophila melanogaster"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005741 "mitochondrial
outer membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005741 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 EMBL:AY113316 ProteinModelPortal:Q8MZ76 SMR:Q8MZ76
STRING:Q8MZ76 PaxDb:Q8MZ76 PRIDE:Q8MZ76 FlyBase:FBgn0028868
InParanoid:Q8MZ76 OrthoDB:EOG49W0X0 ChiTaRS:CG4701
ArrayExpress:Q8MZ76 Bgee:Q8MZ76 Uniprot:Q8MZ76
Length = 384
Score = 171 (65.3 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 52/158 (32%), Positives = 82/158 (51%)
Query: 370 IQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQ 429
++H K + +K+ +AP + +L +GPPG GKT++A+ IA+ +G+ + + G +
Sbjct: 115 VRH-RKLFSRSKLWRAP-KGVLLHGPPGCGKTLIAKAIAKDAGMRFINLDVGVLTDKWYG 172
Query: 430 AVTKIHE-IFDWAKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRD 488
K+ +F AKK + ++FIDE ++FL R S +L G S
Sbjct: 173 ESQKLATAVFTLAKKLQP-CIIFIDEIESFLRMRGSNDHEATAMIKTQFMLQWDGLMSNT 231
Query: 489 --IVLVL-ATNRPGDLDSAITDRIDEVIEFPLPREEER 523
VLVL ATNRP DLD AI R+ +PR+ +R
Sbjct: 232 NICVLVLGATNRPQDLDKAILRRMPAQFHIGVPRDCQR 269
Score = 56 (24.8 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 561 KDLSDNV-IQEAARKTEGFSG---REIAKLMASVQAAVYARPDCVLDSQLFREVVEYKVE 616
+ LS +V ++E AR T GFSG RE+ + + + + R ++ R+ +E+ E
Sbjct: 280 EQLSPSVNLKELARLTIGFSGSDLRELCRHASMYRMRQFMREKLNTGEEIGRDKIEWDFE 339
Query: 617 EHHQRIK 623
Q ++
Sbjct: 340 VKDQALQ 346
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 185 (70.2 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 52/146 (35%), Positives = 80/146 (54%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YG PGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 218 PPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTK 361
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 185 (70.2 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 52/146 (35%), Positives = 80/146 (54%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YG PGTGKT++A+ +A ++ + + G ++ LG + E+F A++
Sbjct: 218 PPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 444 SKKGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R NS E QR+ L L G SR D+ +++ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ RID IEFPLP E+ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTK 361
>ZFIN|ZDB-GENE-040426-1235 [details] [associations]
symbol:vps4b "vacuolar protein sorting 4b (yeast)"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-1235 GO:GO:0005524 Pfam:PF04212 HSSP:Q01853
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 HOVERGEN:HBG057074
SMART:SM00745 KO:K12196 CTD:9525 EMBL:BC055202 IPI:IPI00836860
RefSeq:NP_957200.1 UniGene:Dr.85231 ProteinModelPortal:Q7SXY0
SMR:Q7SXY0 STRING:Q7SXY0 PRIDE:Q7SXY0 GeneID:393880 KEGG:dre:393880
NextBio:20814861 ArrayExpress:Q7SXY0 Bgee:Q7SXY0 Uniprot:Q7SXY0
Length = 437
Score = 184 (69.8 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 49/146 (33%), Positives = 81/146 (55%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDW 440
+ P+R +L +GPPGTGK+ +A+ +A ++ + ++ D+ LG ++ + +F
Sbjct: 157 RTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLG-ESEKLVKSLFTL 215
Query: 441 AKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFR---TGDQSRDIVLVLATNR 497
A++ K ++ FIDE D+ LC S + SEA R L + G+ + I+++ ATN
Sbjct: 216 AREHKPSII-FIDEIDS-LCGSRSENESEAARRIKTEFLVQMQGVGNDNEGILVLGATNI 273
Query: 498 PGDLDSAITDRIDEVIEFPLPREEER 523
P LDSAI R ++ I PLP E R
Sbjct: 274 PWTLDSAIRRRFEKRIYIPLPEEHAR 299
Score = 44 (20.5 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIA 584
T L+++ +KT+G+SG +I+
Sbjct: 310 TPNSLTESDFMTLGKKTDGYSGADIS 335
>MGI|MGI:1100499 [details] [associations]
symbol:Vps4b "vacuolar protein sorting 4b (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005764
"lysosome" evidence=ISO] [GO:0005768 "endosome" evidence=ISO]
[GO:0005769 "early endosome" evidence=ISO] [GO:0005770 "late
endosome" evidence=ISO] [GO:0005774 "vacuolar membrane"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0007032 "endosome organization" evidence=IMP] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0010008 "endosome membrane" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030301
"cholesterol transport" evidence=IMP] [GO:0032367 "intracellular
cholesterol transport" evidence=ISO] [GO:0032510 "endosome to
lysosome transport via multivesicular body sorting pathway"
evidence=ISO] [GO:0033993 "response to lipid" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1100499
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005774
GO:GO:0051301 GO:GO:0031902 GO:GO:0015031 GO:GO:0005768
GO:GO:0005764 GO:GO:0016887 GO:GO:0016197 GO:GO:0032367
GO:GO:0006813 GO:GO:0033993 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0007032 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005769 GO:GO:0030301 HOVERGEN:HBG057074 SMART:SM00745
HOGENOM:HOG000225146 GO:GO:0032510 KO:K12196 OrthoDB:EOG4G1MGD
CTD:9525 OMA:AKCAEYL EMBL:U10119 EMBL:AF134119 EMBL:BC003799
IPI:IPI00133700 PIR:S48696 RefSeq:NP_033216.2 UniGene:Mm.18705
UniGene:Mm.483448 PDB:2ZAM PDB:2ZAN PDB:2ZAO PDBsum:2ZAM
PDBsum:2ZAN PDBsum:2ZAO ProteinModelPortal:P46467 SMR:P46467
STRING:P46467 PhosphoSite:P46467 PaxDb:P46467 PRIDE:P46467
Ensembl:ENSMUST00000094646 Ensembl:ENSMUST00000112736 GeneID:20479
KEGG:mmu:20479 InParanoid:P46467 EvolutionaryTrace:P46467
NextBio:298605 Bgee:P46467 CleanEx:MM_VPS4B Genevestigator:P46467
GermOnline:ENSMUSG00000009907 Uniprot:P46467
Length = 444
Score = 174 (66.3 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 51/146 (34%), Positives = 80/146 (54%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDW 440
+ P+R +L +GPPGTGK+ +A+ +A ++ + ++ D+ LG ++ + +F
Sbjct: 164 RTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLG-ESEKLVKNLFQL 222
Query: 441 AKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRT-G-DQSRDIVLVL-ATNR 497
A+++K ++ FIDE D+ LC S + SEA R L + G D +LVL ATN
Sbjct: 223 ARENKPSII-FIDEIDS-LCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNI 280
Query: 498 PGDLDSAITDRIDEVIEFPLPREEER 523
P LDSAI R ++ I PLP R
Sbjct: 281 PWVLDSAIRRRFEKRIYIPLPEAHAR 306
Score = 55 (24.4 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIA 584
T L++ QE RKT+G+SG +I+
Sbjct: 317 TQNSLTEADFQELGRKTDGYSGADIS 342
>RGD|1305969 [details] [associations]
symbol:Vps4b "vacuolar protein sorting 4 homolog B (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=ISO] [GO:0005769 "early endosome"
evidence=IEA;ISO] [GO:0005770 "late endosome" evidence=IEA;ISO]
[GO:0005774 "vacuolar membrane" evidence=IEA;ISO] [GO:0005829
"cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006813 "potassium ion transport"
evidence=IEA;ISO] [GO:0007032 "endosome organization"
evidence=IEA;ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010008 "endosome membrane" evidence=IEA;ISO] [GO:0016197
"endosomal transport" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=IEA;ISO] [GO:0030301 "cholesterol transport" evidence=ISO]
[GO:0032367 "intracellular cholesterol transport" evidence=IEA;ISO]
[GO:0032510 "endosome to lysosome transport via multivesicular body
sorting pathway" evidence=IEA;ISO] [GO:0033993 "response to lipid"
evidence=IEA;ISO] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:1305969 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005774 GO:GO:0005764 GO:GO:0016887 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
Pfam:PF04212 eggNOG:COG0464 GO:GO:0007032 InterPro:IPR015415
Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 GO:GO:0032510
EMBL:CH474000 KO:K12196 OrthoDB:EOG4G1MGD CTD:9525 EMBL:BC099128
IPI:IPI00363819 RefSeq:NP_001020887.1 UniGene:Rn.25893 SMR:Q4KLL7
STRING:Q4KLL7 Ensembl:ENSRNOT00000003715 GeneID:360834
KEGG:rno:360834 UCSC:RGD:1305969 InParanoid:Q4KLL7 OMA:XKRTPWR
NextBio:674292 Genevestigator:Q4KLL7 Uniprot:Q4KLL7
Length = 444
Score = 174 (66.3 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 51/146 (34%), Positives = 80/146 (54%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDW 440
+ P+R +L +GPPGTGK+ +A+ +A ++ + ++ D+ LG ++ + +F
Sbjct: 164 RTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLG-ESEKLVKNLFQL 222
Query: 441 AKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRT-G-DQSRDIVLVL-ATNR 497
A+++K ++ FIDE D+ LC S + SEA R L + G D +LVL ATN
Sbjct: 223 ARENKPSII-FIDEIDS-LCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNI 280
Query: 498 PGDLDSAITDRIDEVIEFPLPREEER 523
P LDSAI R ++ I PLP R
Sbjct: 281 PWVLDSAIRRRFEKRIYIPLPEAHAR 306
Score = 55 (24.4 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIA 584
T L++ QE RKT+G+SG +I+
Sbjct: 317 TQNSLTEADFQELGRKTDGYSGADIS 342
>FB|FBgn0005322 [details] [associations]
symbol:nmd "no mitochondrial derivative" species:7227
"Drosophila melanogaster" [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0007286 "spermatid development" evidence=TAS] [GO:0005741
"mitochondrial outer membrane" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048190 "wing disc dorsal/ventral
pattern formation" evidence=IGI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0048190 EMBL:AE014134
GO:GO:0005741 GO:GO:0007286 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 GeneTree:ENSGT00550000074823 EMBL:AY119493
RefSeq:NP_609373.1 UniGene:Dm.11450 SMR:Q9VL02 IntAct:Q9VL02
MINT:MINT-282656 STRING:Q9VL02 EnsemblMetazoa:FBtr0080065
GeneID:44021 KEGG:dme:Dmel_CG5395 UCSC:CG5395-RA CTD:44021
FlyBase:FBgn0005322 InParanoid:Q9VL02 OMA:EMCRNAS OrthoDB:EOG4PG4GP
GenomeRNAi:44021 NextBio:836621 Uniprot:Q9VL02
Length = 369
Score = 182 (69.1 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 58/170 (34%), Positives = 90/170 (52%)
Query: 362 LHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSG-----LDYA 416
L S+ IQH ++K+ QAP + +L +GPPG GKT++A+ A+++G LD A
Sbjct: 109 LRESVVLPIQH-KDLFKHSKLWQAP-KGVLLHGPPGCGKTLIAKATAKEAGMRFINLDVA 166
Query: 417 MMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERN-SIHMSEAQRSAL 475
++T D +Q +T +F A + + ++FIDE D+FL RN + H + A
Sbjct: 167 ILT--DKWYGESQKLTSA--VFSLASRIEP-CIIFIDEIDSFLRSRNMNDHEATAMMKTQ 221
Query: 476 NALLFR-TGDQSRDIVLVL-ATNRPGDLDSAITDRIDEVIEFPLPREEER 523
+L+ + V+V+ ATNRP DLD AI R+ LP E +R
Sbjct: 222 FMMLWDGLSTNANSTVIVMGATNRPQDLDKAIVRRMPAQFHIGLPSETQR 271
Score = 42 (19.8 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 10/36 (27%), Positives = 23/36 (63%)
Query: 561 KDLSDNV-IQEAARKTEGFSGREIAKLMASVQAAVY 595
+++S +V + ++ T GFSG ++ ++ + A+VY
Sbjct: 282 EEVSQDVDLNRLSKLTNGFSGSDLREMCRN--ASVY 315
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 184 (69.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 49/143 (34%), Positives = 78/143 (54%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L YGPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 210 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 269
Query: 447 GLLLFIDEADAFLCERNSIHM---SEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++ F+DE D+ R SE QR+ L L G + +++I +++ATNR LD
Sbjct: 270 SII-FMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 328
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
SA+ RID IEFP P E+ R
Sbjct: 329 SALLRPGRIDRKIEFPAPDEKAR 351
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 165 (63.1 bits), Expect = 5.4e-11, Sum P(3) = 5.4e-11
Identities = 45/151 (29%), Positives = 79/151 (52%)
Query: 381 KIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFD 439
K +P + ++ YGPPG KT + + +A S L + ++G + +P + I +IF
Sbjct: 598 KFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPYLGDSEQTIRDIFK 657
Query: 440 WAKKSKKGLLLFIDEADAFLCERN-SIHMS--EAQRSALNALLFRTG--DQSRDIVLVLA 494
A+++ +L F DE DA + +RN S + S AQ L+ L +Q ++++ A
Sbjct: 658 KARQTTPSILFF-DEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGVEQLNGVIVIGA 716
Query: 495 TNRPGDLDSAIT--DRIDEVIEFPLPREEER 523
TNR +D+A+ R D+++E LP + R
Sbjct: 717 TNRLDMIDNALLRPGRFDKILEIKLPDQLSR 747
Score = 157 (60.3 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIA-----RKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDW 440
P + +L GPPGTGKT + R + +D A ++G + E D
Sbjct: 320 PPKGILLKGPPGTGKTHLVRTVCDAYDIEMISIDCAKISGSYIGETEENLRNIFQEASDK 379
Query: 441 A-KKSKKGLLLFIDEADAFLCERNSIHMSEAQR-SALNALLFRTGDQSRDIVLVLATNRP 498
+ KS +++FIDE D R+ +E++ LL G + +++++ ATNRP
Sbjct: 380 SIAKSNSPIVVFIDEIDTICPPRSKSTQNESRVVGQFLTLLDGIGARKGNLIIIAATNRP 439
Query: 499 GDLDSAIT--DRIDEVIEFPLPREEER 523
+D+A+ R+D IE P+P +++R
Sbjct: 440 NQIDNALRRPGRLDREIEIPVPNKQQR 466
Score = 62 (26.9 bits), Expect = 5.4e-11, Sum P(3) = 5.4e-11
Identities = 30/145 (20%), Positives = 64/145 (44%)
Query: 141 QQKAQARAQGLRNEDELARKRLQTDHEAQRRH----NTELVKMQEESSIRKEQARRSTEE 196
QQK Q + Q + + ++ T Q+ + N++L+ Q+ + +EQ + +E
Sbjct: 77 QQKQQKQQQQQQQNKQCIISKVWTSRYIQQNYYIQSNSKLILNQQIND--EEQEQEQEQE 134
Query: 197 QIQAQQRLTEKERAEIERET-IRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREKWL 255
Q Q +Q +K+ I+ + +++ + E E + + +++ N
Sbjct: 135 QEQQEQEQNKKQNKSIKYPSFVKIYKVNEFENNLNNVDI------EIIVSNNNNNNNN-- 186
Query: 256 AAINTTFSHIEEGVRSLLTDRNKLV 280
I T FS ++ ++ LL NKL+
Sbjct: 187 ENIRTLFSS-KQFIKQLLI--NKLI 208
Score = 52 (23.4 bits), Expect = 5.4e-11, Sum P(3) = 5.4e-11
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 557 KITIKD--LSDNV-IQEAARKTEGFSGREIAKLM--ASVQA 592
KI K LSDNV + E + T GFSG ++ L AS Q+
Sbjct: 752 KIKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREASFQS 792
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 188 (71.2 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 48/139 (34%), Positives = 74/139 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVA-PLGAQAVTKIHEIFDWAKKS 444
P + +L YGPPG KTM+A+ +A +SGL++ + G ++ ++ + EIF A+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 719
Query: 445 KKGLLLFIDEADAFLCERNSIHMSE--AQRSALNALLFRTG-DQSRDIVLVLATNRPGDL 501
++ F DE DA ER S + A R L G +Q +D+ ++ ATNRP +
Sbjct: 720 SPSIIFF-DELDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRI 778
Query: 502 DSAIT--DRIDEVIEFPLP 518
D A+ RID +I PLP
Sbjct: 779 DKALMRPGRIDRIIYVPLP 797
Score = 186 (70.5 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 52/146 (35%), Positives = 80/146 (54%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P R +L YGPPGTGKTM+AR +A + G +++ G ++ + + ++ +IF A
Sbjct: 386 PPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLR 445
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTG---DQSRDIVLVL-ATNRPG 499
++ FIDE DA LC + +E ++ + +LL G + S VLVL ATNRP
Sbjct: 446 HPSII-FIDELDA-LCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPH 503
Query: 500 DLDSAIT--DRIDEVIEFPLPREEER 523
LD+A+ R D+ IE +P +R
Sbjct: 504 ALDAALRRPGRFDKEIEIGVPNAADR 529
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 181 (68.8 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 52/152 (34%), Positives = 78/152 (51%)
Query: 380 TKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEI 437
T++ P + +L YGPPGTGKT++A+ +A G ++ + +G A I E+
Sbjct: 199 TRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESA-RLIREM 257
Query: 438 FDWAKKSKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVL 493
F +AK+ + ++F+DE DA R S S E QR+ + L G D +++
Sbjct: 258 FAYAKEHEP-CIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQTKIIM 316
Query: 494 ATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
ATNRP LD A+ R+D IE LP E R
Sbjct: 317 ATNRPDTLDPALLRAGRLDRKIEIGLPNEAGR 348
Score = 45 (20.9 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 550 LFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKLMASVQA-AVYARPDCVLDSQLFR 608
+FK K+ + D + A + ++GF+G +I ++ A+ D +L + L +
Sbjct: 351 IFKIHTSKVAKQGEFD--FEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQNDLMK 408
Query: 609 EV 610
V
Sbjct: 409 AV 410
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 182 (69.1 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 51/147 (34%), Positives = 77/147 (52%)
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAK 442
+P + L YGPPGTGKT++AR IA + ++ + + +G A I E+F +A+
Sbjct: 174 SPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESA-RLIREMFAYAR 232
Query: 443 KSKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRP 498
+ ++F+DE DA R S S E QR+ + L G D + +++ATNRP
Sbjct: 233 DHQP-CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRP 291
Query: 499 GDLDSAIT--DRIDEVIEFPLPREEER 523
LD A+ R+D +E PLP E R
Sbjct: 292 DTLDPALLRPGRLDRKLEIPLPNEVAR 318
>UNIPROTKB|O61577 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:7668 "Strongylocentrotus purpuratus" [GO:0000922 "spindle
pole" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AF052191 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0005815 eggNOG:COG0464 GO:GO:0008568
GO:GO:0000922 GO:GO:0005874 KO:K07767 HAMAP:MF_03023 CTD:11104
RefSeq:NP_999733.1 UniGene:Spu.26881 ProteinModelPortal:O61577
STRING:O61577 GeneID:373368 KEGG:spu:373368 InParanoid:O61577
Uniprot:O61577
Length = 516
Score = 172 (65.6 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 45/148 (30%), Positives = 79/148 (53%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 444
P++ +L GPPGTGKTM+A+ +A + G + ++ + + ++ + +F+ A+
Sbjct: 266 PWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFY 325
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFR--------TGDQSRDIVLVLA-T 495
+ FIDE D+ +R + EA R + LL + G++S +V+VLA T
Sbjct: 326 APSTI-FIDEIDSICSKRGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAAT 384
Query: 496 NRPGDLDSAITDRIDEVIEFPLPREEER 523
N P D+D A+ R+++ I PLP + R
Sbjct: 385 NFPWDIDEALRRRLEKRIYIPLPEIDGR 412
Score = 52 (23.4 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 552 KKQQQKITIKD--LSDNV-IQEAARKTEGFSGREIAKLM--ASVQA 592
++Q +I +K+ L+D++ ++ A K +G+SG +I + AS+ A
Sbjct: 412 REQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMMA 457
Score = 45 (20.9 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 159 RKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTE 195
+K L + HE QR+H + ++ +E S E + T+
Sbjct: 37 QKLLTSVHEPQRKHQWQTIR--QELSQEYEHVKNITK 71
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 171 (65.3 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 51/169 (30%), Positives = 89/169 (52%)
Query: 343 TSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTM 402
T A AG EA + G+++ + + Q L + P + +L GPPGTGKT+
Sbjct: 157 TFANVAGVDEAKQEVGEVVEFLKSREKFQALGA--------RIP-KGILLIGPPGTGKTL 207
Query: 403 VAREIARKSGLDYAMMTGGDVAPL--GAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLC 460
+A+ IA ++G+ + ++G + + G A +++ ++FD AKK+ ++FIDE DA
Sbjct: 208 LAKAIAGEAGVPFFSISGSEFVEMFVGVGA-SRVRDLFDQAKKNAP-CIIFIDEIDAVGR 265
Query: 461 ERNS-IHMSEAQRS-ALNALLFRTG--DQSRDIVLVLATNRPGDLDSAI 505
+R + + +R LN +L D ++++ ATNRP LD A+
Sbjct: 266 QRGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPAL 314
Score = 61 (26.5 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 561 KDLSDNV-IQEAARKTEGFSGREIAKLM--ASVQAA 593
K L+D V ++ A++T GFSG ++A L+ A++ AA
Sbjct: 345 KPLADTVNLENLAKQTVGFSGADLANLLNEAAILAA 380
>TIGR_CMR|CHY_2164 [details] [associations]
symbol:CHY_2164 "ATPase, AAA family" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0019538 "protein metabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0464 GO:GO:0017111 RefSeq:YP_360978.1
ProteinModelPortal:Q3AA56 STRING:Q3AA56 GeneID:3726841
KEGG:chy:CHY_2164 PATRIC:21277395
BioCyc:CHYD246194:GJCN-2163-MONOMER Uniprot:Q3AA56
Length = 411
Score = 179 (68.1 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 56/189 (29%), Positives = 93/189 (49%)
Query: 342 KTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKT 401
K+ G VE+I+ + I+L P ++ + + + P +N++ YGPPG GKT
Sbjct: 157 KSLYGLEEAVESIEKSLKIVLDPETSKKFRAMGLSV--------P-KNIILYGPPGNGKT 207
Query: 402 MVAREIARKSGLDYAMMTGGDVAPLG---AQAVTKIHEIFDWAKKSKKGLLLFIDEADAF 458
AR +A+ GL + ++ + G A + E+F AK + ++ F DE DA
Sbjct: 208 NFARTVAQAYGLPFFVVNASAIISSGQLVGAAEKTLLELFANAKALRPAIIFF-DEIDAI 266
Query: 459 LCERNSIHMSEAQRSALNALLFRTG--DQSRDIVLVLATNRPGDLDSAIT--DRIDEVIE 514
+R + ++ A +N LL + ++ D++L+ ATNR LD AI R D+ I
Sbjct: 267 AKKRRAETLNSASDILINILLTQMDGFEKVDDVLLIAATNRIDILDEAILRPGRFDQKIL 326
Query: 515 FPLPREEER 523
P P +E R
Sbjct: 327 IPNPDKEAR 335
Score = 46 (21.3 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 556 QKITIKDLSDNVIQEAARKTEGFSGREIAKLMAS 589
QKI K + +++ A TEGFS EI + S
Sbjct: 345 QKIE-KGIDAELLEYLANSTEGFSVAEIKTIADS 377
>DICTYBASE|DDB_G0281521 [details] [associations]
symbol:DDB_G0281521 "BRAT group protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 dictyBase:DDB_G0281521 GO:GO:0005524
EMBL:AAFI02000041 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 RefSeq:XP_640671.1 ProteinModelPortal:Q54TZ0
EnsemblProtists:DDB0220704 GeneID:8623056 KEGG:ddi:DDB_G0281521
InParanoid:Q54TZ0 OMA:FPEYYEL ProtClustDB:CLSZ2846786
Uniprot:Q54TZ0
Length = 1800
Score = 159 (61.0 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 47/148 (31%), Positives = 76/148 (51%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGL-----DYAMMTGGD-VAPLGAQAVTKIHEIFD 439
P + +LFYGPPGTGKT++AR + + + + M G D ++ +A ++ +F+
Sbjct: 772 PPKGVLFYGPPGTGKTLLARALVNECNVGGQKVSFFMRKGADCLSKWVGEAERQLRLLFE 831
Query: 440 WAKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALL-FRTGDQSRDIVLVL-ATNR 497
AK + ++ F DE D R+S + S ++ LL G +R V+V+ ATNR
Sbjct: 832 QAKAMQPSIIFF-DEIDGLAPVRSS-RQDQIHNSIVSTLLALMDGLDNRGQVIVIGATNR 889
Query: 498 PGDLDSAIT--DRIDEVIEFPLPREEER 523
+D A+ R D + F LP +E R
Sbjct: 890 IDSIDPALRRPGRFDRELLFTLPSKEAR 917
Score = 85 (35.0 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 31/161 (19%), Positives = 67/161 (41%)
Query: 58 QKSREPEEPRGSGFDPXXXXXXXXXXXXFNSSRHAREAFDIMRKQEQTRLAELDVEKVHY 117
Q+ R P P+ F+ +++R ++ + E + + + Y
Sbjct: 250 QRQRVP--PKSFSFEATLNGYDDDIDEIHSNNRQRKKQNTNNNRNNNNNDDEGEDDNISY 307
Query: 118 EAIQSQVDVERQRKLAEEHRNLVQQKAQARAQGLRNEDELARKRLQTDHEAQRRHNTELV 177
+ IQ Q ++Q++ ++ + Q++ Q + Q E+E+ ++ D E Q+
Sbjct: 308 K-IQQQQQQQQQQQQQQQQQQTSQRQKQYQQQEDEEEEEVETEQDDDDEEEQQEEENAYS 366
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIR 218
+ EE + +E EE+ Q + E+E E E++ R
Sbjct: 367 EYGEED-VDEEMVEEEEEEE-QEEGEEEEEEEGEEEQQNNR 405
Score = 68 (29.0 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 21/102 (20%), Positives = 46/102 (45%)
Query: 147 RAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTE 206
+ Q + + + +++ Q +QR+ + + +EE + EQ EEQ + + +E
Sbjct: 308 KIQQQQQQQQQQQQQQQQQQTSQRQKQYQQQEDEEEEEVETEQDDDDEEEQQEEENAYSE 367
Query: 207 KERAEIERETIRVKAMAEAE-GRAHEAKLTED---HNRRMLI 244
+++ E + + E E G E + E+ +NR+ I
Sbjct: 368 YGEEDVDEEMVEEEEEEEQEEGEEEEEEEGEEEQQNNRKYTI 409
Score = 60 (26.2 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKER-AEIERETIRVKAMAEAEGRAHEAKLTE 236
+ Q++ +++Q +++++ Q Q QQ+ E+E E E++ + E E A+ E
Sbjct: 313 QQQQQQQQQQQQQQQTSQRQKQYQQQEDEEEEEVETEQDDDDEEEQQEEEN-AYSEYGEE 371
Query: 237 DHNRRMLIERINGEREK 253
D + M+ E E+E+
Sbjct: 372 DVDEEMVEEEEEEEQEE 388
Score = 58 (25.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 28/138 (20%), Positives = 60/138 (43%)
Query: 102 QEQTRLAELDVEK-VHYEAIQSQVDVERQRKLAEEH--RNLVQQKAQARAQGLRNEDELA 158
Q Q L +K + Y+ Q +++ E Q+K + R V K+ + L D+
Sbjct: 214 QIQQELQNKQHQKHIRYQQQQMKLE-EEQKKFQPQRPQRQRVPPKSFSFEATLNGYDDDI 272
Query: 159 RKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIR 218
+ + +++ +++ NT + + E S + Q Q QQ+ ++++ + ++ + R
Sbjct: 273 DE-IHSNNRQRKKQNTNNNRNNNNNDDEGEDDNISYKIQQQQQQQQQQQQQQQQQQTSQR 331
Query: 219 VKAMAEAEGRAHEAKLTE 236
K + E E TE
Sbjct: 332 QKQYQQQEDEEEEEVETE 349
Score = 52 (23.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 15/102 (14%), Positives = 44/102 (43%)
Query: 152 RNEDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAE 211
R + R +++ + + K+Q++ +++Q ++ ++Q +Q+ +++ E
Sbjct: 282 RKKQNTNNNRNNNNNDDEGEDDNISYKIQQQQQQQQQQQQQQQQQQTSQRQKQYQQQEDE 341
Query: 212 IERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREK 253
E E + + E + E ++ + E + E E+
Sbjct: 342 EEEEVETEQDDDDEEEQQEEENAYSEYGEEDVDEEMVEEEEE 383
Score = 50 (22.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 21/86 (24%), Positives = 39/86 (45%)
Query: 169 QRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIERETIRVKAMA-EAEG 227
Q + EL Q + IR +Q + EE+ Q+ + +R + R+ + K+ + EA
Sbjct: 212 QHQIQQELQNKQHQKHIRYQQQQMKLEEE----QKKFQPQRPQ--RQRVPPKSFSFEATL 265
Query: 228 RAHEAKLTEDH--NRRMLIERINGER 251
++ + E H NR+ + N R
Sbjct: 266 NGYDDDIDEIHSNNRQRKKQNTNNNR 291
Score = 48 (22.0 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 17/68 (25%), Positives = 34/68 (50%)
Query: 135 EHRNLVQQKAQARAQ---GLRNEDELARKRLQT-DHEAQRRHNTELVKMQEESSIRKEQA 190
E++ L QQ + + Q GL ++ LQ H+ R+ + +K++EE +K Q
Sbjct: 189 ENKILNQQLKKQQPQENIGLGKFQHQIQQELQNKQHQKHIRYQQQQMKLEEEQ--KKFQP 246
Query: 191 RRSTEEQI 198
+R +++
Sbjct: 247 QRPQRQRV 254
Score = 45 (20.9 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 13/45 (28%), Positives = 18/45 (40%)
Query: 158 ARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQ 202
+RKR + RR T + +EE R +S QI Q
Sbjct: 435 SRKRNKITTPVPRRRYTSIYDYEEEEEKRPATLSKSRSTQIALSQ 479
Score = 37 (18.1 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 113 EKVHYEAIQSQVDVERQRKLAEEHRNLVQQK 143
E + Q Q+ E Q K ++H QQ+
Sbjct: 204 ENIGLGKFQHQIQQELQNKQHQKHIRYQQQQ 234
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 186 (70.5 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 77/261 (29%), Positives = 126/261 (48%)
Query: 332 SQAMNKVIRNKTSAGTAGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNML 391
++ ++K + T A AG EA++ +I LQ ++ A KI P + +L
Sbjct: 150 AKQLSKDMPKTTFADVAGVDEAVEELYEI--KDFLQNPSRYQA---LGAKI---P-KGVL 200
Query: 392 FYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPL--GAQAVTKIHEIFDWAKKSKKGLL 449
YGPPGTGKT++AR +A ++G+ + ++G D + G A +++ ++F+ AK++ +
Sbjct: 201 LYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGA-SRVRDLFEQAKQNSP-CI 258
Query: 450 LFIDEADAFLCERNS-IHMSEAQRS-ALNALLFRT---GDQSRDIVLVLATNRPGDLDSA 504
+F+DE DA +R + + +R LN LL GD++ ++L+ ATNRP LD A
Sbjct: 259 IFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRA-GVILIAATNRPDILDPA 317
Query: 505 IT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWGHLFKKQQQKITIKD 562
+ R D I P R + + D L K+ +T D
Sbjct: 318 LLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLA------KRTVGMTGAD 371
Query: 563 LSDNVIQEAARKTEGFSGREI 583
L+ NVI EAA T +G I
Sbjct: 372 LA-NVINEAALLTARENGTVI 391
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 186 (70.5 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 51/153 (33%), Positives = 82/153 (53%)
Query: 380 TKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIF 438
T IH P R +L +GPPG GKTM+A +A + G+ + ++ V+ + ++ K+ E+F
Sbjct: 203 TGIH--PPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVF 260
Query: 439 DWAKKSKKGLLLFIDEADAFLCERNSIHMSEAQR------SALNALLFRTGDQSRDIVLV 492
+ AK S L+FIDE DA +R S +R + ++ L F D + ++++
Sbjct: 261 EEAK-SLAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTD-GKPVLVI 318
Query: 493 LATNRPGDLDSAI--TDRIDEVIEFPLPREEER 523
ATNRP LDSA+ R D I +P ++ R
Sbjct: 319 GATNRPDSLDSALRRAGRFDREICLTVPSQDAR 351
Score = 157 (60.3 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 46/144 (31%), Positives = 76/144 (52%)
Query: 385 APFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVA-PLGAQAVTKIHEIFDWAKK 443
AP +L +GPPG GKT++A+ +A +S ++ + G ++ ++ + ++F A+
Sbjct: 525 AP-TGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARA 583
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRT-GDQSRDIVLVLA-TNRPGDL 501
S ++F DE DA + R+ +SEA +N LL G R V V+A TNRP +
Sbjct: 584 SSP-CVIFFDELDAMVPRRDD-SLSEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDII 641
Query: 502 DSAIT--DRIDEVIEFPLPREEER 523
D A+ R+D+ + LP ER
Sbjct: 642 DPAMLRPGRLDKTLLVDLPDAHER 665
Score = 41 (19.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 23/88 (26%), Positives = 38/88 (43%)
Query: 109 ELDVEKVHYEA--IQSQVDVERQRKLAEEHRNLVQQKAQARAQGLRNEDEL---ARKRLQ 163
EL V + A I S + E ++K+ E V ++A++ A L DE+ KR
Sbjct: 231 ELGVPFISISAPSIVSGMSGESEKKVRE-----VFEEAKSLAPCLMFIDEIDAVTPKRES 285
Query: 164 TDHEAQRRHNTELVKMQEESSIRKEQAR 191
E +RR + + +E S K +
Sbjct: 286 AQREMERRIVAQFLTCMDELSFEKTDGK 313
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 181 (68.8 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 48/139 (34%), Positives = 78/139 (56%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKKSK 445
+ ++ YGPPGTGKT++AR +A + + ++G ++ +G + + E+F A++
Sbjct: 179 KGVILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIG-EGSRMVRELFVMAREHA 237
Query: 446 KGLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDL 501
++ F+DE D+ R +S SE QR+ L L G + S+DI +++ATNR L
Sbjct: 238 PSII-FMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDIL 296
Query: 502 DSAIT--DRIDEVIEFPLP 518
D A+ RID IEFP P
Sbjct: 297 DPALLRPGRIDRKIEFPAP 315
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 185 (70.2 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 55/167 (32%), Positives = 85/167 (50%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPL--GAQAVTKIHEIFDWAKKSK 445
+ +L GPPGTGKT++AR A ++G+ + M+G + L G A +I E+F A+ K
Sbjct: 259 KGVLLTGPPGTGKTLLARATAGEAGVPFFFMSGSEFDELYVGVGA-KRIRELFSQAR-DK 316
Query: 446 KGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTG--DQSRDIVLVLATNRPGDLDS 503
++FIDE DA +RN + A+++ LN LL Q+ I+++ ATN P LD
Sbjct: 317 APAIIFIDELDAIGGKRNPKDQAYAKQT-LNQLLVELDGFSQTEGIIIIGATNFPESLDK 375
Query: 504 AIT--DRIDEVIEFPLPREEERFXXXXXXXXXXXCSDEGDSSSLKWG 548
A+T R D+ + LP R +D+ D S + G
Sbjct: 376 ALTRPGRFDKEVIVDLPDVRGRIDILKHHMQNVETADDVDPSIIARG 422
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 180 (68.4 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 48/143 (33%), Positives = 79/143 (55%)
Query: 388 RNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKSKK 446
+ +L +GPPGTGKT++AR +A + + ++G + V + + E+F A++
Sbjct: 194 KGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 253
Query: 447 GLLLFIDEADAFLCER---NSIHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLD 502
++ F+DE D+ R +S SE QR+ L L G + +++I +++ATNR LD
Sbjct: 254 SII-FMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 312
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
A+ RID IEFP P E+ R
Sbjct: 313 PALLRPGRIDRKIEFPAPDEKAR 335
Score = 44 (20.5 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 178 KMQEESSIRKEQARRSTEEQIQAQQRLTEKE----RAEIERETIRVKAMAEAEGRAHEAK 233
K+ EES + + ST+ AQQ++ +K R + +R + K R + +
Sbjct: 20 KLTEESDEKTLRKYFSTKVD-DAQQKVADKSQNVRRLQAQRNELNTKV------RMLKEE 72
Query: 234 LTEDHNRRMLIERING--EREKWLAAINTTFSHIEEGVRSLLTDRNKLVMTVGGATALAA 291
L + H + + ++ +++K L ++ ++ + +S+ D N L G AL A
Sbjct: 73 LQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSI--DINSL--NTGARVALRA 128
Query: 292 GIY 294
Y
Sbjct: 129 DSY 131
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 180 (68.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 53/148 (35%), Positives = 78/148 (52%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWA 441
+AP + +L YGPPGTGKT++AR IA ++ + + +G A I E+F +A
Sbjct: 169 KAP-KGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARV-IREMFGYA 226
Query: 442 KKSKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNR 497
+ + ++F+DE DA R S S E QR+ + L G D + +++ATNR
Sbjct: 227 RDHQP-CVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNR 285
Query: 498 PGDLDSAIT--DRIDEVIEFPLPREEER 523
P LD A+ R+D IE PLP E R
Sbjct: 286 PDVLDPALLRPGRLDRKIEIPLPNEAGR 313
>ZFIN|ZDB-GENE-030616-44 [details] [associations]
symbol:atad1b "ATPase family, AAA domain containing
1b" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-030616-44 GO:GO:0005886 GO:GO:0005524 GO:GO:0005777
GO:GO:0030054 GO:GO:0045211 GO:GO:0006200 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000225141 HOVERGEN:HBG057074
OrthoDB:EOG412M5T GeneTree:ENSGT00550000074823 EMBL:BC095151
EMBL:AL731788 IPI:IPI00487088 RefSeq:NP_001019592.1
UniGene:Dr.78224 ProteinModelPortal:Q503W7 STRING:Q503W7
Ensembl:ENSDART00000079130 Ensembl:ENSDART00000140927 GeneID:368412
KEGG:dre:368412 CTD:368412 OMA:YQVGIAD NextBio:20812908 Bgee:Q503W7
Uniprot:Q503W7
Length = 362
Score = 174 (66.3 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 56/180 (31%), Positives = 91/180 (50%)
Query: 348 AGPVEAIKNNGDIILHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREI 407
AG E I D ++ P +Q+R HL + + ++ Q P + +L YGPPG GKT++A+
Sbjct: 98 AGLDEVITELKDTVILP-IQKR--HLFEGS---RLLQPP-KGVLLYGPPGCGKTLIAKAT 150
Query: 408 ARKSGLDYAMMTGGDVAPLGAQAVTKIHE-IFDWAKKSKKGLLLFIDEADAFLCERNSI- 465
A+++G + + + K+ +F A K + ++ FIDE D+FL R+S
Sbjct: 151 AKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSII-FIDEIDSFLRNRSSSD 209
Query: 466 HMSEAQRSALNALLFR--TGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPREEER 523
H + A A L+ D + ++++ ATNRP DLDSAI R+ P +R
Sbjct: 210 HEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILRRMPTRFHINQPNVRQR 269
Score = 47 (21.6 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 568 IQEAARKTEGFSGREIAKL 586
+ E A++T+GFSG ++ ++
Sbjct: 288 LSEIAKQTDGFSGSDLREM 306
>UNIPROTKB|G4N2E6 [details] [associations]
symbol:MGG_07916 "Vacuolar protein sorting-associated
protein 4" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:CM001233 Pfam:PF04212
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 KO:K12196
RefSeq:XP_003713158.1 ProteinModelPortal:G4N2E6 SMR:G4N2E6
EnsemblFungi:MGG_07916T0 GeneID:2683843 KEGG:mgr:MGG_07916
Uniprot:G4N2E6
Length = 427
Score = 178 (67.7 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 47/137 (34%), Positives = 74/137 (54%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 444
P++ +L YGPPGTGK+ +A+ +A ++ + ++ D V+ ++ + ++F A+++
Sbjct: 157 PWKGILLYGPPGTGKSFLAKAVATEAKSTFFSVSSSDLVSKWMGESERLVKQLFAMAREN 216
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDI--VLVL-ATNRPGDL 501
K ++ FIDE DA LC SEA R +L + +D VLVL ATN P L
Sbjct: 217 KPSII-FIDEVDA-LCGARGEGESEASRRIKTEMLVQMDGVGKDSEGVLVLGATNIPWQL 274
Query: 502 DSAITDRIDEVIEFPLP 518
DSAI R + LP
Sbjct: 275 DSAIRRRFQRRVHISLP 291
Score = 46 (21.3 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIAKLM 587
T L++ +E A+ EG+SG +I+ ++
Sbjct: 307 TPSSLTNEDYRELAKMAEGYSGSDISNVV 335
>UNIPROTKB|O75351 [details] [associations]
symbol:VPS4B "Vacuolar protein sorting-associated protein
4B" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0006813 "potassium
ion transport" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA;IMP] [GO:0005764
"lysosome" evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0005770 "late endosome" evidence=IDA] [GO:0016197 "endosomal
transport" evidence=IDA;IMP;TAS] [GO:0006200 "ATP catabolic
process" evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032510 "endosome
to lysosome transport via multivesicular body sorting pathway"
evidence=IMP] [GO:0033993 "response to lipid" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IDA] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042623 "ATPase activity,
coupled" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0032367 "intracellular cholesterol transport" evidence=IMP]
[GO:0005768 "endosome" evidence=IDA] [GO:0016044 "cellular membrane
organization" evidence=TAS] Reactome:REACT_11123 InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005774 GO:GO:0051301
GO:GO:0031902 GO:GO:0015031 GO:GO:0005764 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0007032
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 GO:GO:0016044
HOVERGEN:HBG057074 GO:GO:0042623 EMBL:CH471096 SMART:SM00745
PDB:2JQK PDBsum:2JQK HOGENOM:HOG000225146 GO:GO:0032510 KO:K12196
OrthoDB:EOG4G1MGD CTD:9525 OMA:AKCAEYL EMBL:AF195514 EMBL:AF282904
EMBL:AF038960 EMBL:AY232629 EMBL:BC039574 IPI:IPI00182728
RefSeq:NP_004860.2 UniGene:Hs.126550 PDB:1WR0 PDB:1XWI PDB:2CPT
PDB:2JQH PDBsum:1WR0 PDBsum:1XWI PDBsum:2CPT PDBsum:2JQH
ProteinModelPortal:O75351 SMR:O75351 IntAct:O75351 STRING:O75351
PhosphoSite:O75351 PaxDb:O75351 PeptideAtlas:O75351 PRIDE:O75351
DNASU:9525 Ensembl:ENST00000238497 GeneID:9525 KEGG:hsa:9525
UCSC:uc002lix.3 GeneCards:GC18M061056 HGNC:HGNC:10895 HPA:CAB046445
MIM:609983 neXtProt:NX_O75351 PharmGKB:PA35795 InParanoid:O75351
PhylomeDB:O75351 EvolutionaryTrace:O75351 GenomeRNAi:9525
NextBio:35700 Bgee:O75351 CleanEx:HS_VPS4B Genevestigator:O75351
GermOnline:ENSG00000119541 Uniprot:O75351
Length = 444
Score = 174 (66.3 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 51/146 (34%), Positives = 80/146 (54%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDW 440
+ P+R +L +GPPGTGK+ +A+ +A ++ + ++ D+ LG ++ + +F
Sbjct: 164 RTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLG-ESEKLVKNLFQL 222
Query: 441 AKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRT-G-DQSRDIVLVL-ATNR 497
A+++K ++ FIDE D+ LC S + SEA R L + G D +LVL ATN
Sbjct: 223 ARENKPSII-FIDEIDS-LCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNI 280
Query: 498 PGDLDSAITDRIDEVIEFPLPREEER 523
P LDSAI R ++ I PLP R
Sbjct: 281 PWVLDSAIRRRFEKRIYIPLPEPHAR 306
Score = 51 (23.0 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIA 584
T L++ +E RKT+G+SG +I+
Sbjct: 317 TQNSLTEADFRELGRKTDGYSGADIS 342
>CGD|CAL0001067 [details] [associations]
symbol:orf19.4362 species:5476 "Candida albicans" [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006626 "protein
targeting to mitochondrion" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0001067 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000225141 EMBL:AACQ01000091
EMBL:AACQ01000090 RefSeq:XP_715087.1 RefSeq:XP_715138.1
ProteinModelPortal:Q5A026 GeneID:3643190 GeneID:3643254
KEGG:cal:CaO19.11840 KEGG:cal:CaO19.4362 Uniprot:Q5A026
Length = 369
Score = 182 (69.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 52/151 (34%), Positives = 83/151 (54%)
Query: 378 ANTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHE- 436
A++ + Q+P + +LFYGPPG GKTM+A+ IA++SG + + + KI +
Sbjct: 126 AHSSLIQSP-KGVLFYGPPGCGKTMLAKAIAKESGAFFLSIRMSSIMDKWYGESNKITDA 184
Query: 437 IFDWAKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRT---GDQSRDIVLVL 493
IF A K + ++FIDE D+FL +R+S ++ + SA+ F T G +S ++VL
Sbjct: 185 IFSLANKLQP-CIIFIDEIDSFLRDRSS---NDHEVSAMLKAEFMTLWDGLKSNGQIMVL 240
Query: 494 -ATNRPGDLDSAITDRIDEVIEFPLPREEER 523
ATNR D+D A R+ + P +R
Sbjct: 241 GATNRKNDIDEAFLRRMPKTFAIGKPNASQR 271
Score = 38 (18.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 562 DLSDNVIQEAARKTEGFSGREIAKL 586
D +D ++ T GFSG ++ +L
Sbjct: 285 DENDFDLEYIVANTRGFSGSDLREL 309
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 186 (70.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 49/144 (34%), Positives = 80/144 (55%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P R +L YGPPGTGKTMV R +A ++ + G V LG + +++ +IF+ A+
Sbjct: 312 PPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLG-ETESRLRKIFEDARA 370
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSR--DIVLVLATNRPGDL 501
+ ++ FIDE DA L + + +SEA+ A+ LL + +V++ ATNRP +
Sbjct: 371 HQPSII-FIDEIDA-LAPKRTEDVSEAESRAVATLLTLLDGMANAGKVVVIAATNRPNSI 428
Query: 502 DSAIT--DRIDEVIEFPLPREEER 523
D A+ R+++ IE +P + R
Sbjct: 429 DEALRRPGRLEKEIEIGIPDKSAR 452
Score = 156 (60.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 42/143 (29%), Positives = 78/143 (54%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP-LGAQAVTKIHEIFDWAKKS 444
P + +L YGPPG KT+ A+ IA ++GL++ + G ++ ++ + ++F A+++
Sbjct: 581 PPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQA 640
Query: 445 KKGLLLFIDEADAFLCERNSIHMSEAQRSAL-NALLFRTGDQS-RDIVLVLATNRPGDLD 502
++ F DE DA R + S+ +AL N L G ++ R+++++ ATNRP +D
Sbjct: 641 SPSVIFF-DEIDALTANRGEDNSSDRVVAALLNEL---DGIEALRNVLVLAATNRPDMID 696
Query: 503 SAIT--DRIDEVIEFPLPREEER 523
A+ R+D ++ P E R
Sbjct: 697 PALMRPGRLDRLLYVGPPNFEAR 719
Score = 46 (21.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 550 LFKKQQQKITIKDLSDNVIQEAARKTEGFSGREIAKL 586
+ K Q +K+ K D + A KTEG SG E+ L
Sbjct: 722 IVKIQAEKM--KFAEDVDLDLIAEKTEGCSGAEVVAL 756
>UNIPROTKB|F1PVE5 [details] [associations]
symbol:VPS4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 Pfam:PF04212 GO:GO:0017111 InterPro:IPR015415
Pfam:PF09336 SMART:SM00745 GeneTree:ENSGT00550000074466 KO:K12196
CTD:9525 OMA:AKCAEYL EMBL:AAEX03000082 RefSeq:XP_848812.1
Ensembl:ENSCAFT00000000116 GeneID:607306 KEGG:cfa:607306
Uniprot:F1PVE5
Length = 444
Score = 174 (66.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 51/146 (34%), Positives = 80/146 (54%)
Query: 384 QAPFRNMLFYGPPGTGKTMVAREIARKSGLD-YAMMTGGDVAP--LGAQAVTKIHEIFDW 440
+ P+R +L +GPPGTGK+ +A+ +A ++ + ++ D+ LG ++ + +F
Sbjct: 164 RTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLG-ESEKLVKNLFQL 222
Query: 441 AKKSKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRT-G-DQSRDIVLVL-ATNR 497
A+++K ++ FIDE D+ LC S + SEA R L + G D +LVL ATN
Sbjct: 223 ARENKPSII-FIDEIDS-LCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNI 280
Query: 498 PGDLDSAITDRIDEVIEFPLPREEER 523
P LDSAI R ++ I PLP R
Sbjct: 281 PWVLDSAIRRRFEKRIYIPLPEAHAR 306
Score = 50 (22.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 559 TIKDLSDNVIQEAARKTEGFSGREIA 584
T L++ +E +KT+G+SG +I+
Sbjct: 317 TQNSLAETDFRELGKKTDGYSGADIS 342
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 180 (68.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 51/141 (36%), Positives = 73/141 (51%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + ++ YG PGTGKT++A+ +A + + + G ++ LG + E+F A
Sbjct: 221 PPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG-DGPKLVRELFRVADD 279
Query: 444 SKKGLLLFIDEADAFLCERNSIHMS---EAQRSALNALLFRTGDQSR-DIVLVLATNRPG 499
++ FIDE DA +R H E QR+ L L G SR D+ ++LATNR
Sbjct: 280 LSPSIV-FIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIE 338
Query: 500 DLDSAIT--DRIDEVIEFPLP 518
LD A+ RID IEFPLP
Sbjct: 339 SLDPALLRPGRIDRKIEFPLP 359
>SGD|S000003260 [details] [associations]
symbol:MSP1 "Mitochondrial protein involved in mitochondrial
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005741
"mitochondrial outer membrane" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006626 "protein targeting to
mitochondrion" evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000003260 GO:GO:0016021 GO:GO:0005524 GO:GO:0006626
EMBL:BK006941 GO:GO:0005741 GO:GO:0016887 eggNOG:COG0464
HOGENOM:HOG000225141 GeneTree:ENSGT00550000074823 KO:K00706
EMBL:X60722 EMBL:X68055 EMBL:Z72813 RefSeq:NP_011546.3
GeneID:852920 KEGG:sce:YGR032W EMBL:X81069 EMBL:AY557772 PIR:A49506
RefSeq:NP_011542.3 ProteinModelPortal:P28737 SMR:P28737
DIP:DIP-8029N IntAct:P28737 MINT:MINT-4486830 STRING:P28737
PaxDb:P28737 PeptideAtlas:P28737 EnsemblFungi:YGR028W GeneID:852915
KEGG:sce:YGR028W CYGD:YGR028w OMA:VINPLHI OrthoDB:EOG4BVW3J
NextBio:972614 Genevestigator:P28737 GermOnline:YGR028W
Uniprot:P28737
Length = 362
Score = 176 (67.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 51/165 (30%), Positives = 87/165 (52%)
Query: 362 LHPSLQRRIQHLAKATANTKIHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGG 421
LH S+ + + + +N+ + QAP +L YGPPG GKTM+A+ +A++SG ++ +
Sbjct: 103 LHESVIYPLM-MPEVYSNSPLLQAP-SGVLLYGPPGCGKTMLAKALAKESGANFISIRMS 160
Query: 422 DVAPLGAQAVTKIHE-IFDWAKKSKKGLLLFIDEADAFLCERNSI-HMSEAQRSALNALL 479
+ KI + +F A K + ++FIDE D+FL ER+S H A A L
Sbjct: 161 SIMDKWYGESNKIVDAMFSLANKLQP-CIIFIDEIDSFLRERSSTDHEVTATLKAEFMTL 219
Query: 480 FRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPREEERF 524
+ + ++++ ATNR D+D A R+ + LP ++R+
Sbjct: 220 WDGLLNNGRVMIIGATNRINDIDDAFLRRLPKRFLVSLPGSDQRY 264
Score = 43 (20.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 557 KITIKDLSDNVIQEAARKTEGFSGREIAKLM--ASVQAA 593
K T D + +Q A T+GFSG ++ +L A++ AA
Sbjct: 272 KDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAA 310
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 169 (64.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 47/137 (34%), Positives = 77/137 (56%)
Query: 390 MLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPL--GAQAVTKIHEIFDWAKKSKKG 447
+L GPPGTGKT++A+ +A ++ + + ++G D + G A +++ ++FD AKK
Sbjct: 192 VLLVGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGA-SRVRDMFDQAKKQAP- 249
Query: 448 LLLFIDEADAFLCERNS-IHMSEAQRS-ALNALLFRT-GDQSRD-IVLVLATNRPGDLDS 503
++FIDE DA R + + +R LN LL G + ++ I+++ ATNRP LD
Sbjct: 250 CIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDP 309
Query: 504 AIT--DRIDEVIEFPLP 518
A+ R D + PLP
Sbjct: 310 ALLRPGRFDRQVVVPLP 326
Score = 60 (26.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 549 HLFKKQQQKITI-KDLSDNVIQEAARKTEGFSGREIAKLMASVQAAVYA 596
++ K K+ + KD+ +VI AR T GFSG ++A ++ +AA++A
Sbjct: 333 YILKVHMNKLPLAKDVKASVI---ARGTPGFSGADLANIVN--EAALFA 376
>DICTYBASE|DDB_G0268334 [details] [associations]
symbol:DDB_G0268334 "Probable 26S protease subunit
YTA6" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0268334 GO:GO:0005524 EMBL:AAFI02000003
eggNOG:COG0464 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
ProtClustDB:CLSZ2729356 RefSeq:XP_647261.1
ProteinModelPortal:Q55GC3 EnsemblProtists:DDB0202133 GeneID:8616066
KEGG:ddi:DDB_G0268334 InParanoid:Q55GC3 OMA:TENENEA Uniprot:Q55GC3
Length = 792
Score = 154 (59.3 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 43/144 (29%), Positives = 72/144 (50%)
Query: 386 PFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP--LGAQAVTKIHEIFDWAKK 443
P + +L +GPPGTGKTM+ + IA + + ++ + +G + + +F A+
Sbjct: 552 PPKGLLLFGPPGTGKTMIGKAIATQVKATFFSISASTLTSKWIG-EGEKMVRCLFAVARC 610
Query: 444 SKKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFR----TGDQSRDIVLVLATNRPG 499
++ FIDE D+ L R + +EA R L + G+ ++L+ ATNRP
Sbjct: 611 FLPSVI-FIDEIDSLLAARTE-NENEASRRIKTEFLIQWDGVAGNAEDQMLLIGATNRPD 668
Query: 500 DLDSAITDRIDEVIEFPLPREEER 523
+LD A R+ + + PLP E R
Sbjct: 669 ELDEAARRRMTKRLYIPLPDNESR 692
Score = 80 (33.2 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 23/108 (21%), Positives = 55/108 (50%)
Query: 87 NSSRHAREAFDIMRKQEQTRLAELDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKAQA 146
NS+ + D + ++ L ++ + +Y + Q Q+ + +Q K E+ + QQK Q
Sbjct: 217 NSNNNNNYTIDNFQTKQPINLNKVLIN-TNYLSEQRQLIINKQEK--EKQEQIKQQKLQQ 273
Query: 147 RAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRST 194
+ ++L +++ + + E +R+ E K Q++ +++Q R+S+
Sbjct: 274 QRIEQEQREKLEQEQRERERERERKEQLEREKQQQQ---QQQQQRQSS 318
Score = 70 (29.7 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 151 LRNEDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQAQQRLTEKERA 210
L N + L+ +R Q Q + E +K Q+ R EQ +R EQ Q ++R E+ER
Sbjct: 241 LINTNYLSEQR-QLIINKQEKEKQEQIKQQKLQQQRIEQEQREKLEQEQ-RERERERERK 298
Query: 211 E-IERE 215
E +ERE
Sbjct: 299 EQLERE 304
Score = 69 (29.3 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 135 EHRNLVQQKAQARAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRST 194
E R L+ K + Q + +L ++R++ + QR + + +E RKEQ R
Sbjct: 249 EQRQLIINKQEKEKQEQIKQQKLQQQRIEQE---QREKLEQEQRERERERERKEQLEREK 305
Query: 195 EEQIQAQQR 203
++Q Q QQ+
Sbjct: 306 QQQQQQQQQ 314
Score = 67 (28.6 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 29/159 (18%), Positives = 64/159 (40%)
Query: 100 RKQEQTRLAELDVEKVHYEAIQSQVDVERQRKLAEEHRNLVQQKAQARAQGLRNEDELAR 159
+K +Q R+ + EK+ E + + + ER+ +L E + QQ+ Q ++ N +
Sbjct: 269 QKLQQQRIEQEQREKLEQEQRERERERERKEQLEREKQQQQQQQQQRQSSNNNNNNNNNN 328
Query: 160 KRLQTDHEAQRRHNT-EL----VKMQEESSIRKEQARRSTEEQIQAQQRLTEKERAEIER 214
+ + +N L + + E+ I+ + + ++ I Q K+ + +
Sbjct: 329 NNSKFSYNNNNNNNNGRLAPSPMDLDEDEVIKVGDFKSAKDQFIDNQISDKNKKNSNVVS 388
Query: 215 ETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERINGEREK 253
TI+ A + + L RR + E+E+
Sbjct: 389 NTIKKMAASSNPNPVPPSSLPGGKKRRFVPPVKQDEQEE 427
Score = 47 (21.6 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 12/62 (19%), Positives = 32/62 (51%)
Query: 141 QQKAQARAQGLRNEDELARKRLQTDHEAQRRHNTELVKMQEESSIRKEQARRSTEEQIQA 200
QQ+ Q R Q +N++++ + + + + Q H ++ Q++ ++++ + S I+
Sbjct: 83 QQQDQNRQQQQQNKNKIINENIIQNLQKQIGH-LACIQFQKQQLSKEQKTQNSMNSIIEL 141
Query: 201 QQ 202
Q
Sbjct: 142 NQ 143
Score = 40 (19.1 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 562 DLSDNVIQEAARKTEGFSGREIAKLMASVQAA 593
++S + +Q A ++G+SG ++ L S +AA
Sbjct: 706 EISPDDMQNIASISDGYSGADMKSL--STEAA 735
WARNING: HSPs involving 530 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.129 0.359 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 635 575 0.00080 120 3 11 23 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 780
No. of states in DFA: 614 (65 KB)
Total size of DFA: 278 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 66.65u 0.14s 66.79t Elapsed: 00:00:03
Total cpu time: 66.69u 0.14s 66.83t Elapsed: 00:00:03
Start: Mon May 20 15:20:01 2013 End: Mon May 20 15:20:04 2013
WARNINGS ISSUED: 2