Query 006702
Match_columns 634
No_of_seqs 566 out of 3761
Neff 8.6
Searched_HMMs 46136
Date Thu Mar 28 13:15:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006702.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006702hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0509 Ankyrin repeat and DHH 100.0 5.4E-75 1.2E-79 609.4 31.9 501 1-537 12-585 (600)
2 KOG0509 Ankyrin repeat and DHH 100.0 2.7E-42 5.9E-47 363.0 14.4 519 71-633 44-571 (600)
3 KOG4412 26S proteasome regulat 100.0 2.7E-36 5.9E-41 269.4 15.2 207 38-248 4-213 (226)
4 KOG1314 DHHC-type Zn-finger pr 100.0 1.7E-36 3.7E-41 295.3 14.1 192 324-537 56-263 (414)
5 KOG1311 DHHC-type Zn-finger pr 100.0 6.5E-36 1.4E-40 308.2 19.0 155 376-540 113-269 (299)
6 PHA02791 ankyrin-like protein; 100.0 7.2E-35 1.6E-39 295.6 26.4 217 32-263 25-244 (284)
7 KOG1315 Predicted DHHC-type Zn 100.0 6.5E-36 1.4E-40 298.5 16.9 213 321-547 51-266 (307)
8 PHA02874 ankyrin repeat protei 100.0 3.6E-34 7.8E-39 312.2 28.4 224 32-261 30-277 (434)
9 PF01529 zf-DHHC: DHHC palmito 100.0 3.1E-36 6.7E-41 286.7 10.6 171 331-505 2-173 (174)
10 PHA03100 ankyrin repeat protei 100.0 1.8E-34 4E-39 319.0 24.8 248 32-283 30-295 (480)
11 PHA02946 ankyin-like protein; 100.0 4.6E-34 9.9E-39 309.9 26.7 190 34-227 69-266 (446)
12 KOG4412 26S proteasome regulat 100.0 2.4E-35 5.1E-40 263.4 12.7 185 27-213 28-213 (226)
13 PHA02874 ankyrin repeat protei 100.0 8.6E-34 1.9E-38 309.2 27.3 218 39-260 3-243 (434)
14 PHA02946 ankyin-like protein; 100.0 8.9E-34 1.9E-38 307.7 26.3 219 37-261 37-265 (446)
15 PHA02875 ankyrin repeat protei 100.0 1.1E-33 2.3E-38 306.8 26.9 221 37-261 2-224 (413)
16 PHA03095 ankyrin-like protein; 100.0 1.2E-33 2.7E-38 311.7 27.0 253 31-287 41-306 (471)
17 PHA02791 ankyrin-like protein; 100.0 3.6E-33 7.7E-38 283.2 27.3 206 47-262 9-217 (284)
18 PHA03100 ankyrin repeat protei 100.0 2.1E-33 4.6E-38 310.6 26.3 225 33-261 64-305 (480)
19 PHA02878 ankyrin repeat protei 100.0 3.9E-33 8.4E-38 307.7 27.2 239 35-281 35-310 (477)
20 PHA02716 CPXV016; CPX019; EVM0 100.0 5.9E-33 1.3E-37 310.4 24.9 245 34-290 174-543 (764)
21 PHA03095 ankyrin-like protein; 100.0 1.4E-32 3.1E-37 303.2 27.3 227 31-261 77-312 (471)
22 PHA02716 CPXV016; CPX019; EVM0 100.0 1.7E-32 3.7E-37 306.7 24.3 227 30-260 205-561 (764)
23 KOG0510 Ankyrin repeat protein 100.0 1.5E-32 3.2E-37 294.1 21.1 260 31-292 115-398 (929)
24 PHA02989 ankyrin repeat protei 100.0 3.7E-31 8E-36 292.9 26.6 245 35-285 33-303 (494)
25 KOG1313 DHHC-type Zn-finger pr 100.0 3.4E-32 7.4E-37 257.5 14.1 165 376-543 102-282 (309)
26 PHA02876 ankyrin repeat protei 100.0 7.9E-31 1.7E-35 301.6 26.9 214 33-250 174-419 (682)
27 PHA02875 ankyrin repeat protei 100.0 1E-30 2.3E-35 283.4 25.9 215 32-248 30-247 (413)
28 COG5273 Uncharacterized protei 100.0 1.2E-31 2.5E-36 273.0 16.2 172 324-510 64-237 (309)
29 PHA02798 ankyrin-like protein; 100.0 1.4E-30 3E-35 288.0 25.3 219 37-259 36-311 (489)
30 KOG0510 Ankyrin repeat protein 100.0 4E-31 8.6E-36 283.1 20.0 257 32-291 83-361 (929)
31 PHA02878 ankyrin repeat protei 100.0 3.1E-30 6.7E-35 284.6 27.7 234 40-278 3-276 (477)
32 PHA02876 ankyrin repeat protei 100.0 5.8E-30 1.3E-34 294.5 30.4 221 37-261 145-397 (682)
33 PHA02989 ankyrin repeat protei 100.0 2.2E-30 4.7E-35 286.8 23.9 232 46-283 12-268 (494)
34 PHA02798 ankyrin-like protein; 100.0 1.5E-29 3.2E-34 279.8 24.2 230 49-282 17-302 (489)
35 KOG1312 DHHC-type Zn-finger pr 100.0 9E-30 1.9E-34 242.1 10.1 113 316-438 97-210 (341)
36 PHA02859 ankyrin repeat protei 100.0 3.2E-28 6.9E-33 238.0 21.0 176 69-250 19-203 (209)
37 KOG0508 Ankyrin repeat protein 100.0 4.6E-29 9.9E-34 252.4 14.9 216 41-260 8-236 (615)
38 PHA02859 ankyrin repeat protei 100.0 4.5E-28 9.7E-33 237.0 20.9 177 34-215 18-203 (209)
39 PHA02917 ankyrin-like protein; 100.0 1.2E-27 2.7E-32 269.5 23.9 227 32-263 27-300 (661)
40 PHA02917 ankyrin-like protein; 100.0 1.5E-27 3.2E-32 268.8 24.0 206 50-261 12-253 (661)
41 KOG0508 Ankyrin repeat protein 100.0 1.7E-28 3.7E-33 248.2 13.2 192 33-226 38-237 (615)
42 PHA02795 ankyrin-like protein; 99.9 1.1E-26 2.3E-31 244.5 21.0 203 48-260 59-283 (437)
43 PHA02795 ankyrin-like protein; 99.9 2E-26 4.4E-31 242.4 20.8 183 43-229 83-287 (437)
44 KOG4177 Ankyrin [Cell wall/mem 99.9 8.7E-28 1.9E-32 273.3 10.9 225 34-262 371-629 (1143)
45 KOG4177 Ankyrin [Cell wall/mem 99.9 1.1E-27 2.4E-32 272.4 10.9 253 32-288 336-623 (1143)
46 PHA02730 ankyrin-like protein; 99.9 4.5E-26 9.7E-31 250.6 23.0 212 45-261 210-520 (672)
47 PHA02730 ankyrin-like protein; 99.9 3.5E-26 7.5E-31 251.5 21.9 192 32-225 36-258 (672)
48 PHA02792 ankyrin-like protein; 99.9 1.5E-25 3.2E-30 243.9 23.0 241 35-280 69-452 (631)
49 TIGR00870 trp transient-recept 99.9 1.6E-24 3.4E-29 251.6 25.9 223 34-261 14-279 (743)
50 KOG0502 Integral membrane anky 99.9 1.3E-25 2.9E-30 206.7 12.9 233 37-274 62-294 (296)
51 KOG0502 Integral membrane anky 99.9 6.4E-26 1.4E-30 208.8 8.0 202 36-244 95-296 (296)
52 PLN03192 Voltage-dependent pot 99.9 3.2E-24 7E-29 250.5 24.0 179 67-250 521-700 (823)
53 KOG0507 CASK-interacting adapt 99.9 1.3E-24 2.7E-29 231.9 15.6 245 1-250 1-265 (854)
54 PLN03192 Voltage-dependent pot 99.9 8.9E-24 1.9E-28 246.8 22.2 178 33-214 521-699 (823)
55 KOG0505 Myosin phosphatase, re 99.9 2.8E-24 6.1E-29 222.5 13.2 214 40-258 43-282 (527)
56 PHA02792 ankyrin-like protein; 99.9 4.7E-23 1E-27 224.5 22.4 247 34-286 34-425 (631)
57 KOG0507 CASK-interacting adapt 99.9 3.3E-23 7.1E-28 221.2 14.4 222 37-262 3-244 (854)
58 PHA02743 Viral ankyrin protein 99.9 5E-22 1.1E-26 187.1 14.8 146 60-205 9-162 (166)
59 KOG0514 Ankyrin repeat protein 99.9 7E-22 1.5E-26 194.8 13.4 162 97-261 261-429 (452)
60 TIGR00870 trp transient-recept 99.9 1.9E-21 4.1E-26 225.8 19.5 216 69-291 15-277 (743)
61 PHA02743 Viral ankyrin protein 99.9 3E-21 6.5E-26 181.8 14.6 145 93-240 9-162 (166)
62 KOG0514 Ankyrin repeat protein 99.8 4.7E-21 1E-25 189.0 10.8 161 64-226 261-429 (452)
63 PHA02884 ankyrin repeat protei 99.8 3.9E-20 8.5E-25 187.9 17.4 155 65-228 26-186 (300)
64 PHA02741 hypothetical protein; 99.8 2.3E-20 5E-25 176.5 14.6 129 66-194 16-155 (169)
65 PHA02741 hypothetical protein; 99.8 8E-20 1.7E-24 172.8 14.4 129 98-227 15-155 (169)
66 KOG0512 Fetal globin-inducing 99.8 1E-19 2.2E-24 162.1 13.4 144 40-183 66-210 (228)
67 PHA02884 ankyrin repeat protei 99.8 1.6E-19 3.4E-24 183.5 16.5 153 33-195 29-186 (300)
68 PHA02736 Viral ankyrin protein 99.8 6.2E-20 1.3E-24 170.9 10.9 132 64-197 10-152 (154)
69 PHA02736 Viral ankyrin protein 99.8 1.5E-19 3.2E-24 168.4 10.8 132 97-231 10-153 (154)
70 KOG4369 RTK signaling protein 99.8 1.2E-19 2.6E-24 198.6 8.3 225 33-261 753-981 (2131)
71 KOG3676 Ca2+-permeable cation 99.8 6.1E-18 1.3E-22 183.7 19.2 219 33-252 97-370 (782)
72 KOG0512 Fetal globin-inducing 99.8 3.1E-18 6.8E-23 152.7 13.8 140 74-214 66-208 (228)
73 KOG4369 RTK signaling protein 99.8 2.6E-19 5.6E-24 196.0 7.0 247 32-280 785-1036(2131)
74 KOG0505 Myosin phosphatase, re 99.8 1.6E-18 3.5E-23 180.0 12.5 204 74-280 43-273 (527)
75 KOG0195 Integrin-linked kinase 99.8 9.7E-19 2.1E-23 167.5 7.0 158 40-198 3-160 (448)
76 KOG3676 Ca2+-permeable cation 99.7 1E-16 2.2E-21 174.3 14.7 222 39-261 54-330 (782)
77 PF12796 Ank_2: Ankyrin repeat 99.7 1.2E-16 2.6E-21 134.0 11.2 89 41-134 1-89 (89)
78 KOG0195 Integrin-linked kinase 99.7 6.6E-17 1.4E-21 155.0 9.0 131 81-212 10-141 (448)
79 cd00204 ANK ankyrin repeats; 99.7 9.9E-16 2.1E-20 135.8 15.5 122 68-190 4-125 (126)
80 cd00204 ANK ankyrin repeats; 99.7 1E-15 2.3E-20 135.6 15.2 124 100-224 3-126 (126)
81 PF12796 Ank_2: Ankyrin repeat 99.7 5.4E-16 1.2E-20 130.0 11.2 89 75-168 1-89 (89)
82 KOG4214 Myotrophin and similar 99.6 6.2E-15 1.3E-19 118.0 8.5 104 39-144 4-107 (117)
83 COG0666 Arp FOG: Ankyrin repea 99.6 4.3E-14 9.3E-19 138.9 15.6 127 100-227 69-203 (235)
84 KOG4214 Myotrophin and similar 99.5 1.2E-13 2.6E-18 110.8 9.1 99 108-208 6-104 (117)
85 COG0666 Arp FOG: Ankyrin repea 99.5 3.2E-13 6.8E-18 132.7 13.3 133 61-194 63-203 (235)
86 KOG1710 MYND Zn-finger and ank 99.4 7E-13 1.5E-17 127.6 11.6 123 34-157 9-132 (396)
87 PTZ00322 6-phosphofructo-2-kin 99.4 3.8E-12 8.3E-17 145.1 13.0 107 38-145 83-196 (664)
88 PTZ00322 6-phosphofructo-2-kin 99.4 5.4E-12 1.2E-16 143.8 13.7 106 74-179 85-196 (664)
89 KOG0515 p53-interacting protei 99.3 3.2E-12 7E-17 132.0 9.8 92 41-133 554-645 (752)
90 PF13857 Ank_5: Ankyrin repeat 99.3 1.4E-12 2.9E-17 98.9 4.9 55 90-144 1-56 (56)
91 PF13637 Ank_4: Ankyrin repeat 99.3 3E-12 6.6E-17 96.3 6.4 54 71-124 1-54 (54)
92 KOG1710 MYND Zn-finger and ank 99.3 9.2E-12 2E-16 120.0 10.9 121 137-260 12-133 (396)
93 PF13637 Ank_4: Ankyrin repeat 99.3 7.5E-12 1.6E-16 94.2 6.3 54 171-224 1-54 (54)
94 PF13857 Ank_5: Ankyrin repeat 99.3 4.2E-12 9.2E-17 96.2 4.7 56 56-111 1-56 (56)
95 KOG0515 p53-interacting protei 99.2 2.6E-11 5.7E-16 125.4 9.9 118 141-260 554-673 (752)
96 KOG0782 Predicted diacylglycer 99.0 4.1E-09 9E-14 109.9 11.5 122 37-159 866-989 (1004)
97 KOG0783 Uncharacterized conser 98.8 5.9E-09 1.3E-13 113.4 4.5 100 47-146 27-128 (1267)
98 KOG0818 GTPase-activating prot 98.7 6.4E-08 1.4E-12 100.0 9.9 95 65-159 121-222 (669)
99 KOG0783 Uncharacterized conser 98.7 6.9E-09 1.5E-13 112.8 2.6 91 162-254 43-134 (1267)
100 KOG0506 Glutaminase (contains 98.7 2.4E-08 5.3E-13 102.6 5.6 95 168-263 503-597 (622)
101 KOG0818 GTPase-activating prot 98.6 9.5E-08 2.1E-12 98.8 9.0 92 34-126 130-222 (669)
102 KOG0506 Glutaminase (contains 98.6 4.5E-08 9.7E-13 100.7 5.1 89 104-192 506-594 (622)
103 KOG0782 Predicted diacylglycer 98.6 1.5E-07 3.3E-12 98.4 8.9 119 141-262 870-990 (1004)
104 PF13606 Ank_3: Ankyrin repeat 98.6 8.5E-08 1.9E-12 62.2 3.9 28 71-98 2-29 (30)
105 PF13606 Ank_3: Ankyrin repeat 98.5 1E-07 2.2E-12 61.9 4.1 30 103-132 1-30 (30)
106 KOG3609 Receptor-activated Ca2 98.5 6.4E-06 1.4E-10 91.6 18.5 127 33-167 21-160 (822)
107 PF00023 Ank: Ankyrin repeat H 98.5 2.2E-07 4.7E-12 61.9 4.3 31 104-134 2-32 (33)
108 PF00023 Ank: Ankyrin repeat H 98.5 2.6E-07 5.6E-12 61.6 4.3 33 70-102 1-33 (33)
109 KOG0705 GTPase-activating prot 98.4 1.1E-06 2.3E-11 92.8 9.4 96 33-129 620-719 (749)
110 KOG0522 Ankyrin repeat protein 98.3 2.1E-06 4.5E-11 90.4 7.9 86 40-125 23-109 (560)
111 KOG0522 Ankyrin repeat protein 98.2 2.4E-06 5.1E-11 90.0 7.7 87 140-226 23-110 (560)
112 KOG0705 GTPase-activating prot 98.2 5.7E-06 1.2E-10 87.5 8.4 61 168-228 658-718 (749)
113 KOG0511 Ankyrin repeat protein 98.0 1.5E-05 3.3E-10 80.3 8.4 75 38-114 37-111 (516)
114 KOG0520 Uncharacterized conser 98.0 1E-05 2.2E-10 91.9 7.0 129 133-261 570-702 (975)
115 KOG3609 Receptor-activated Ca2 98.0 3.4E-05 7.5E-10 85.9 10.4 122 72-200 26-160 (822)
116 KOG0521 Putative GTPase activa 97.9 9E-06 2E-10 92.9 4.9 84 103-187 655-738 (785)
117 KOG0520 Uncharacterized conser 97.9 4.2E-05 9.1E-10 87.0 9.4 129 97-226 567-702 (975)
118 KOG0521 Putative GTPase activa 97.9 9.7E-06 2.1E-10 92.7 4.2 91 168-260 653-743 (785)
119 KOG2384 Major histocompatibili 97.8 3.6E-05 7.8E-10 70.9 6.5 65 95-159 3-68 (223)
120 KOG0511 Ankyrin repeat protein 97.8 3.9E-05 8.5E-10 77.5 7.3 76 72-148 37-112 (516)
121 KOG2384 Major histocompatibili 97.7 7.6E-05 1.6E-09 68.8 6.7 70 61-130 2-72 (223)
122 COG5273 Uncharacterized protei 96.7 0.014 3E-07 60.2 11.3 151 374-536 121-279 (309)
123 KOG2505 Ankyrin repeat protein 96.2 0.0047 1E-07 65.1 4.5 63 83-145 403-471 (591)
124 smart00248 ANK ankyrin repeats 96.2 0.008 1.7E-07 37.0 4.0 26 104-129 2-27 (30)
125 smart00248 ANK ankyrin repeats 96.2 0.0085 1.9E-07 36.9 3.9 29 70-98 1-29 (30)
126 KOG2505 Ankyrin repeat protein 95.3 0.028 6E-07 59.5 5.7 71 41-112 394-471 (591)
127 PF03158 DUF249: Multigene fam 94.3 0.55 1.2E-05 43.9 10.6 44 175-224 147-190 (192)
128 PF06128 Shigella_OspC: Shigel 93.8 0.27 5.8E-06 47.2 7.8 114 40-163 156-279 (284)
129 PF06128 Shigella_OspC: Shigel 93.5 0.54 1.2E-05 45.2 9.4 119 74-228 156-278 (284)
130 PF01529 zf-DHHC: DHHC palmito 91.7 0.69 1.5E-05 43.5 7.8 62 374-446 60-121 (174)
131 PF03158 DUF249: Multigene fam 88.9 2.5 5.3E-05 39.6 8.4 139 38-192 47-191 (192)
132 PF11929 DUF3447: Domain of un 88.5 1 2.3E-05 36.0 5.2 46 107-159 9-54 (76)
133 PF11929 DUF3447: Domain of un 84.3 1.9 4.2E-05 34.4 4.7 46 74-126 9-54 (76)
134 KOG1315 Predicted DHHC-type Zn 79.8 7 0.00015 40.2 7.8 63 372-445 119-181 (307)
135 KOG1311 DHHC-type Zn-finger pr 76.8 6.6 0.00014 40.5 6.9 42 389-430 112-164 (299)
136 KOG1314 DHHC-type Zn-finger pr 72.3 24 0.00051 36.5 9.0 93 317-428 54-146 (414)
137 PF13240 zinc_ribbon_2: zinc-r 72.3 1.8 3.8E-05 26.0 0.7 21 378-398 1-21 (23)
138 KOG1313 DHHC-type Zn-finger pr 68.5 33 0.00072 34.2 8.9 54 376-440 116-169 (309)
139 PRK04136 rpl40e 50S ribosomal 68.1 2.5 5.4E-05 30.1 0.8 23 376-398 14-36 (48)
140 PF13248 zf-ribbon_3: zinc-rib 66.6 2.9 6.2E-05 25.9 0.8 23 376-398 2-24 (26)
141 PF10571 UPF0547: Uncharacteri 62.4 3.9 8.5E-05 25.3 0.9 22 377-398 1-22 (26)
142 PF07850 Renin_r: Renin recept 49.1 6 0.00013 33.2 0.2 32 312-343 52-83 (98)
143 PTZ00303 phosphatidylinositol 48.8 7.9 0.00017 43.7 1.0 22 377-398 461-489 (1374)
144 PF07010 Endomucin: Endomucin; 46.9 38 0.00082 32.8 5.1 27 330-356 208-234 (259)
145 KOG1842 FYVE finger-containing 46.8 6 0.00013 41.9 -0.2 29 374-402 178-208 (505)
146 COG1552 RPL40A Ribosomal prote 45.5 4.7 0.0001 28.8 -0.8 23 376-398 14-36 (50)
147 PF12773 DZR: Double zinc ribb 43.2 16 0.00035 26.2 1.7 34 376-409 12-48 (50)
148 PF14015 DUF4231: Protein of u 41.1 2.2E+02 0.0047 24.1 8.8 22 493-514 78-99 (112)
149 PHA02680 ORF090 IMV phosphoryl 39.8 1.3E+02 0.0029 24.5 6.3 24 482-505 60-83 (91)
150 KOG4737 ATPase membrane sector 39.6 41 0.00088 33.5 4.2 36 308-343 276-311 (326)
151 PRK15103 paraquat-inducible me 38.9 5.4E+02 0.012 27.9 16.7 30 377-406 222-251 (419)
152 PF01020 Ribosomal_L40e: Ribos 37.7 17 0.00036 26.5 0.9 24 376-399 17-42 (52)
153 PF00641 zf-RanBP: Zn-finger i 36.9 16 0.00036 23.2 0.8 20 378-397 6-25 (30)
154 PRK02935 hypothetical protein; 36.8 1.9E+02 0.0042 24.6 7.1 15 288-302 18-32 (110)
155 PF04053 Coatomer_WDAD: Coatom 33.2 37 0.00081 37.1 3.2 162 39-227 266-429 (443)
156 PF12773 DZR: Double zinc ribb 30.0 33 0.00072 24.6 1.5 22 376-397 29-50 (50)
157 TIGR02484 CitB CitB domain pro 28.6 2.4E+02 0.0051 30.0 8.0 15 391-409 48-62 (372)
158 KOG3183 Predicted Zn-finger pr 24.1 32 0.0007 33.6 0.7 16 396-411 34-49 (250)
159 PF06906 DUF1272: Protein of u 21.5 60 0.0013 24.2 1.5 35 379-416 8-50 (57)
160 PF08600 Rsm1: Rsm1-like; Int 21.5 37 0.00081 28.2 0.5 14 403-416 54-67 (91)
161 PLN03081 pentatricopeptide (PP 21.4 1.3E+03 0.028 26.7 15.8 226 28-263 319-556 (697)
162 PF01363 FYVE: FYVE zinc finge 21.2 34 0.00074 26.4 0.2 26 376-401 9-36 (69)
163 PF06143 Baculo_11_kDa: Baculo 20.5 2.7E+02 0.0058 22.8 5.1 31 473-503 39-69 (84)
No 1
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=100.00 E-value=5.4e-75 Score=609.42 Aligned_cols=501 Identities=36% Similarity=0.559 Sum_probs=352.2
Q ss_pred CCCcchhhhhccccccCCCCCCCCCCCCCCcccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHH
Q 006702 1 MSSEIEVVEEVGQSSQNHHNHDQSSPSNGVVVDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAAL 80 (634)
Q Consensus 1 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~ 80 (634)
|+.++|+.+.... ........++.....+++.....++.|++.|+++.|+.|++.++.+++.+|.+|.|+|||||.
T Consensus 12 ~~~~~e~~~~~~~----~~~~~~~~~~~~~~~e~d~~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAi 87 (600)
T KOG0509|consen 12 LSHEIEVVPLIMF----HLSPGVEGESSNLSFEEDSSLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAI 87 (600)
T ss_pred CCCCCcccccccc----ccCcccCCCCcccccccchhhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHH
Confidence 5666666666511 111122222333345788889999999999999999999997699999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHc
Q 006702 81 NNRTAAAQYIIEHGGDVNAAD-HTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSK 159 (634)
Q Consensus 81 ~g~~~~v~~Ll~~gad~n~~~-~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~ 159 (634)
+++.+++|+|+++|+|+|..+ .-+.||||||+++|+..+|++|+++|||++.+|.+|.+|+|+|++.|+..++.|||.+
T Consensus 88 NNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~ 167 (600)
T KOG0509|consen 88 NNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSK 167 (600)
T ss_pred cCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHh
Confidence 999999999999999999998 5789999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCC
Q 006702 160 WNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQD-KEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNT 238 (634)
Q Consensus 160 ~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~ 238 (634)
++++|.+|.+|+||||||+++|+...++.|++.|+.+...| .+|+||||||+..||.+++++|++.| .+.+.+|.+
T Consensus 168 -~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~--~~~d~~~~~ 244 (600)
T KOG0509|consen 168 -GADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGG--ADLDKTNTN 244 (600)
T ss_pred -cccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcC--CcccccccC
Confidence 79999999999999999999999988999999999999888 89999999999999999999666666 566788888
Q ss_pred CCCHHHHHHhcCcHHHHHHHHH-HHHHhcccCCCCCCcccccccCcchhHHHHHHHHHHHHHHh----------------
Q 006702 239 GLTPAQLASDKNHRQVAFFLGN-ARRLLDKRCDGNSPIGKISKLGLAPALWCVILLMLVTYMHS---------------- 301 (634)
Q Consensus 239 g~Tpl~~A~~~~~~~i~~~L~~-~~~l~~~~~~~~~~~~~~~~~g~~~l~~~~i~~~l~~y~~~---------------- 301 (634)
|+||+++|.++. ++..+.. ......+..+.... ........+.+ +++..|+..
T Consensus 245 g~tp~~LA~~~~---~~~~~~h~~~~~~~~~~~K~~~-----~~~~~~~~~f~--~~~~~~~~~~~~~g~i~~~~~~w~i 314 (600)
T KOG0509|consen 245 GKTPFDLAQERK---LVAALHHDVVERLGKVVKKWFL-----GSKLAALIFFI--FLGLFYFISSWLPGVIFLINSLWLI 314 (600)
T ss_pred CCCHHHHHHHhh---hHHHhhccHHHhhcccccchhh-----hhHHHHHHHHH--HHHHHHHHHhhccchhhhhhhHHHH
Confidence 999999998872 2222211 11111111000000 00111111111 111110000
Q ss_pred ---hhhhcc---------------CCccchhh--HHH-----HHH--------------HHHHHHHHHHHHHhhhccCCC
Q 006702 302 ---VIMASN---------------LPKLTAGF--GLL-----AWS--------------GVFLATGGLVLFYRCSRKDPG 342 (634)
Q Consensus 302 ---~i~~~~---------------~~~~~~~~--~~~-----~w~--------------~i~l~~~~l~~~~~~~~~dPG 342 (634)
.+...+ .+....+. ..+ .|+ .++..+..++.|.+...+|||
T Consensus 315 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fw~~~~w~~~i~~~~~~~~~~~~i~~~l~~~~~f~~~~rsDPg 394 (600)
T KOG0509|consen 315 KGLALGKLVLTCLCATRKIVGFLLRPPLLSGFFLSTLFWFYYFWFSKITPYTLFDFHYCFIISVLAYFITFGLFLRSDPG 394 (600)
T ss_pred hhhhhhhhhhheeccchhhccccccchhHHHHHHHHHHHHHHhhheeccchhhhhhHHHHHHHHHHHHHHHHHHhccCCC
Confidence 000000 00000000 011 111 112233445677788889999
Q ss_pred ccccCCCCCCCCCCchhhhhhhccCcchhccccc-ccccccccccCCCCCCCCcchhhhhccCCcCccccccccCCChHH
Q 006702 343 YIRMNVHDPQNMKDDEPLLKIEMNNPALLAGNWS-QLCATCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWD 421 (634)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~C~~C~~~kP~Rs~HC~~C~~CV~rfDHHCpwv~ncIG~~N~r~ 421 (634)
++|...... .+...... +..+.+.+ ++|.+|.++||.|||||++|||||.||||||||++||||.+|||+
T Consensus 395 ~i~~~~~~~-----~~tIs~l~----d~gkf~~en~FC~~clirKp~rSkhc~vcnrcVarfDHhCPwi~ncVG~kNh~~ 465 (600)
T KOG0509|consen 395 FIPTSTEVG-----RETISQLI----DFGKFDLENRFCLTCLIRKPLRSKHCSVCNRCVARFDHHCPWIGNCVGLKNHRL 465 (600)
T ss_pred CCCCchhhH-----HHHHHHhh----ccccccccccceeeeeeecCCccchhhhhHHHHhccccCCCccccccCccchHH
Confidence 998764322 11111110 11122234 699999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhccccchhhHHHHHHHH-------H------HHHHHH-HHH
Q 006702 422 FFLFLVLEVSAMLVTGAVTVIRVFTDPVAPSSFGAWMSYASTHHIGALSFLIADFS-------L------FFGVAV-LTA 487 (634)
Q Consensus 422 F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~------~~~~~~-l~~ 487 (634)
|+.|+++....+.++.+.+.+.+...... .. .|. ...+.+.++... + ..+... .-+
T Consensus 466 F~~Fl~~l~~~~~~~l~~~~~y~~~~~~~-~~--~~~-------~~l~~~~~~~~~~~~~~~~~~n~~~~~t~~~~~~~~ 535 (600)
T KOG0509|consen 466 FVFFLLTLLTVIVFYLYLCLYYIMNLENA-ST--IYV-------GFLIAVQAFRIPKPVTGNLLGNEDLNPTWGSTSTKC 535 (600)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchh-HH--HHH-------HHHHHHHHHhCCccceeeeeeccccccccccccccc
Confidence 99999887666655555554433221110 00 000 000000011000 0 011122 223
Q ss_pred HHHHHHhhcchhHHHHhhhhhhhhcCCCCCccCCCCHhHHhHHHHhcccC
Q 006702 488 VQASQISRNITTNEMANALRYNYLRGAGGRFRNPYDHGCKRNCSDFLING 537 (634)
Q Consensus 488 ~~~~~i~~n~TT~E~~~~~r~~y~~~~~~~~~npyd~G~~~N~~~f~~~~ 537 (634)
.|...++.++||+|+++..||++++...+..++|++.|+.+|+.+||-..
T Consensus 536 ~~~~~~c~~~tt~e~~n~~r~~~~~~~~~~~~~~~s~g~~~Nl~df~~~~ 585 (600)
T KOG0509|consen 536 QHYNCACLHLTTNEQINVKRYEHLGIKRGPTRSPFSPGPIRNLVDFFLCS 585 (600)
T ss_pred cccceeeecccHHHHHHHHHhhccccccCcCCCCCCchhhhcchheeecc
Confidence 44456789999999999999999988888889999999999999999544
No 2
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=100.00 E-value=2.7e-42 Score=362.97 Aligned_cols=519 Identities=23% Similarity=0.201 Sum_probs=369.2
Q ss_pred CchHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccc-cCCChHHHHHHHhC
Q 006702 71 GYYALQWAALNNRTAAAQYIIEH-GGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAAD-MYGYQTTHVAAQYG 148 (634)
Q Consensus 71 g~t~Lh~Aa~~g~~~~v~~Ll~~-gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d-~~g~t~L~~Aa~~g 148 (634)
-.+.+..|++.|.++.|+.|++. |.+++..|.+|.|+|||||.+++++++++|+++|||+|..+ ..+.||||.|+++|
T Consensus 44 ~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G 123 (600)
T KOG0509|consen 44 SLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNG 123 (600)
T ss_pred hhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcC
Confidence 35678899999999999999998 99999999999999999999999999999999999999998 78899999999999
Q ss_pred CHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 006702 149 QTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGK 228 (634)
Q Consensus 149 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~ 228 (634)
+..+++.|+++ |+|++.+|.+|.||||.|+..|+.-.|-+|+.+|+|+|.+|.+|+||||||+.+|....++.||+.|
T Consensus 124 ~~~vv~lLlqh-GAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~- 201 (600)
T KOG0509|consen 124 HISVVDLLLQH-GADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFG- 201 (600)
T ss_pred cHHHHHHHHHc-CCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhc-
Confidence 99999999988 9999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred CCCccccC-CCCCCHHHHHHhcCcHHHHHHHHHHHHHhc-ccCCCCCCcccccccCcchhHHHHHHHHHHHHHHhhh--h
Q 006702 229 KEDLMVTD-NTGLTPAQLASDKNHRQVAFFLGNARRLLD-KRCDGNSPIGKISKLGLAPALWCVILLMLVTYMHSVI--M 304 (634)
Q Consensus 229 ~~d~~~~d-~~g~Tpl~~A~~~~~~~i~~~L~~~~~l~~-~~~~~~~~~~~~~~~g~~~l~~~~i~~~l~~y~~~~i--~ 304 (634)
+.+..+| ++|.||||+|+..|+..++.+|.+++.-.+ .+.+|.+|+..+.+. +.. ....+... .
T Consensus 202 -a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~------~~~-----~~~~h~~~~~~ 269 (600)
T KOG0509|consen 202 -ASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER------KLV-----AALHHDVVERL 269 (600)
T ss_pred -ccccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh------hhH-----HHhhccHHHhh
Confidence 5666777 999999999999999999986666544333 223345555554443 111 00001000 0
Q ss_pred hccCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCccccCCCCCCCCCCchhhhhhhccCcchhccccccccccccc
Q 006702 305 ASNLPKLTAGFGLLAWSGVFLATGGLVLFYRCSRKDPGYIRMNVHDPQNMKDDEPLLKIEMNNPALLAGNWSQLCATCKI 384 (634)
Q Consensus 305 ~~~~~~~~~~~~~~~w~~i~l~~~~l~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~ 384 (634)
....++.........|+... .++.++.++..+||++..... . ...+...+........|.+|.+
T Consensus 270 ~~~~~K~~~~~~~~~~~~f~----~~~~~~~~~~~~~g~i~~~~~-~-----------w~i~~~~L~~~~~~~~~~~~~~ 333 (600)
T KOG0509|consen 270 GKVVKKWFLGSKLAALIFFI----FLGLFYFISSWLPGVIFLINS-L-----------WLIKGLALGKLVLTCLCATRKI 333 (600)
T ss_pred cccccchhhhhHHHHHHHHH----HHHHHHHHHhhccchhhhhhh-H-----------HHHhhhhhhhhhhheeccchhh
Confidence 01111222222222222221 455667788899999864421 1 1112233444556789999999
Q ss_pred ccCCCCCCCCcchhhhhccCCcCccccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhccc
Q 006702 385 VRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWDFFLFLVLEVSAMLVTGAVTVIRVFTDPVAPSSFGAWMSYASTH 464 (634)
Q Consensus 385 ~kP~Rs~HC~~C~~CV~rfDHHCpwv~ncIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (634)
..+.+-.+|..|-.|+..|++||+|+. ||+.+|-..|.++.+...+.+++.++..+. ++|......+.+.......
T Consensus 334 ~~~~~~~~~~~~~~~~~~fw~~~~w~~-~i~~~~~~~~~~~~i~~~l~~~~~f~~~~r---sDPg~i~~~~~~~~~tIs~ 409 (600)
T KOG0509|consen 334 VGFLLRPPLLSGFFLSTLFWFYYFWFS-KITPYTLFDFHYCFIISVLAYFITFGLFLR---SDPGFIPTSTEVGRETISQ 409 (600)
T ss_pred ccccccchhHHHHHHHHHHHHHHhhhe-eccchhhhhhHHHHHHHHHHHHHHHHHHhc---cCCCCCCCchhhHHHHHHH
Confidence 999999999999999999999999999 999999887766555555555444444332 4443333333322111110
Q ss_pred cchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhhhcCCCCCccCCCCHhHHhHHHHhcccCCccccc
Q 006702 465 HIGALSFLIA-DFSLFFGVAVLTAVQASQISRNITTNEMANALRYNYLRGAGGRFRNPYDHGCKRNCSDFLINGFNEDVE 543 (634)
Q Consensus 465 ~~~~~~~~~~-~~~~~~~~~~l~~~~~~~i~~n~TT~E~~~~~r~~y~~~~~~~~~npyd~G~~~N~~~f~~~~~~~~~~ 543 (634)
.+-...+..- -++...++--.+..+--.+++.-++.+...--.+.+..++++....+|......++..|+......+..
T Consensus 410 l~d~gkf~~en~FC~~clirKp~rSkhc~vcnrcVarfDHhCPwi~ncVG~kNh~~F~~Fl~~l~~~~~~~l~~~~~y~~ 489 (600)
T KOG0509|consen 410 LIDFGKFDLENRFCLTCLIRKPLRSKHCSVCNRCVARFDHHCPWIGNCVGLKNHRLFVFFLLTLLTVIVFYLYLCLYYIM 489 (600)
T ss_pred hhccccccccccceeeeeeecCCccchhhhhHHHHhccccCCCccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000000111 012222222233445556777777777655555566778888888999999999999998777665555
Q ss_pred cccc--cCCCccccccccccccccCCCCCccccCCCCCceeeecCCCCCCCcCcccccCCCCCCCCCCCCCCCccccccc
Q 006702 544 CVED--SAGTEGIGMMHMSRNSNLQNGDGHIHHANGNGHVAINVNSNNTNSHHGHLHSSHCNHSNHGKSKTDSVPLGLGL 621 (634)
Q Consensus 544 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (634)
..+. ..-++++.+||+.|.....+ |+.|+.+|++.+.. +-+-+.++--|++.+-.+...+..+.+.++
T Consensus 490 ~~~~~~~~~~~~l~~~~~~~~~~~~~---------~~~~~n~~~~~t~~-~~~~~~~~~~~~c~~~tt~e~~n~~r~~~~ 559 (600)
T KOG0509|consen 490 NLENASTIYVGFLIAVQAFRIPKPVT---------GNLLGNEDLNPTWG-STSTKCQHYNCACLHLTTNEQINVKRYEHL 559 (600)
T ss_pred hcchhHHHHHHHHHHHHHHhCCccce---------eeeeeccccccccc-cccccccccceeeecccHHHHHHHHHhhcc
Confidence 5554 24677888999988876665 78888888887622 222222221133333344456777889999
Q ss_pred ccCCCCCccccC
Q 006702 622 GLGRSSARSVVA 633 (634)
Q Consensus 622 ~~~~~~~~~~~~ 633 (634)
|.-|+++|+.++
T Consensus 560 ~~~~~~~~~~~s 571 (600)
T KOG0509|consen 560 GIKRGPTRSPFS 571 (600)
T ss_pred ccccCcCCCCCC
Confidence 999998887664
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-36 Score=269.39 Aligned_cols=207 Identities=29% Similarity=0.361 Sum_probs=191.5
Q ss_pred hhHHHHHHHcCCHHHHHHHHhccCCCCcCCCC-CCchHHHHHHHcCCHHHHHHHH-hcCCCCCCCCCCCCcHHHHHHHhC
Q 006702 38 RNDVYTAAAYGDLEKLQRLVECEGCSVSEPDG-LGYYALQWAALNNRTAAAQYII-EHGGDVNAADHTGQTALHWSAVRG 115 (634)
Q Consensus 38 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-~g~t~Lh~Aa~~g~~~~v~~Ll-~~gad~n~~~~~g~tpLh~A~~~g 115 (634)
.++.+.+++.....-++.++++..-.++.++. +|+|||||||..|+.+++++|+ +.+..+|.+|..|+||||.||..|
T Consensus 4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g 83 (226)
T KOG4412|consen 4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNG 83 (226)
T ss_pred cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcC
Confidence 45667788888888999999976656776655 9999999999999999999999 567889999999999999999999
Q ss_pred CHHHHHHHHhc-CCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcC
Q 006702 116 AIQVAELLLRE-GARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLD 194 (634)
Q Consensus 116 ~~~iv~~Ll~~-gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g 194 (634)
+.++|+.|+.+ |+|+++.+..|.|+||+|+..|+.+++++|+++ |+.++.+|..|.||||-|+..|..+++++|+..|
T Consensus 84 ~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~-ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~ 162 (226)
T KOG4412|consen 84 NDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEK-GALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQG 162 (226)
T ss_pred cHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhc-CCCCcccccccCchhHHHHhccchhhHHHHHhcC
Confidence 99999999998 999999999999999999999999999999998 8999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHh
Q 006702 195 AYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASD 248 (634)
Q Consensus 195 a~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~ 248 (634)
+.+|.+|+.|+||||.|...|+.++..+|+++| +++...|++| ||+..|+-
T Consensus 163 a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~g--Ad~~~edke~-t~~~~a~~ 213 (226)
T KOG4412|consen 163 APLNTQDKYGFTPLHHALAEGHPDVAVLLVRAG--ADTDREDKEG-TALRIACN 213 (226)
T ss_pred CCCCcccccCccHHHHHHhccCchHHHHHHHhc--cceeeccccC-chHHHHHH
Confidence 999999999999999999999999999999999 6777899988 99887753
No 4
>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]
Probab=100.00 E-value=1.7e-36 Score=295.32 Aligned_cols=192 Identities=26% Similarity=0.491 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHhhhccCCCccccCCCCCCCCCCchhhhhhhccCcchhcccccccccccccccCCCCCCCCcchhhhhcc
Q 006702 324 FLATGGLVLFYRCSRKDPGYIRMNVHDPQNMKDDEPLLKIEMNNPALLAGNWSQLCATCKIVRPLRAKHCSTCDRCVEQF 403 (634)
Q Consensus 324 ~l~~~~l~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~rf 403 (634)
+...+.++.|+.+++++||++|+.+..+.. ++ + .+.|+|..|+.+|+||||||+.|||||.+|
T Consensus 56 ~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~-~D-~---------------~~lqfCk~CqgYKapRSHHCrkCnrCvmkM 118 (414)
T KOG1314|consen 56 LWTSMILYNYFNAIFTGPGFVPLGWKPENP-KD-E---------------MFLQFCKKCQGYKAPRSHHCRKCNRCVMKM 118 (414)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCCCCC-hh-H---------------HHHHHHhhccCcCCCccccchHHHHHHHhh
Confidence 445667899999999999999998864321 11 1 124899999999999999999999999999
Q ss_pred CCcCccccccccCCChHHHHHHHHHHHHHHHHHHHHHH-------HHhh--c--CCCCCCCchhhhhhhccccchhhHHH
Q 006702 404 DHHCPWVSNCIGKKNKWDFFLFLVLEVSAMLVTGAVTV-------IRVF--T--DPVAPSSFGAWMSYASTHHIGALSFL 472 (634)
Q Consensus 404 DHHCpwv~ncIG~~N~r~F~~fl~~~~~~~~~~~~~~~-------~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (634)
||||||+|||||..||.+|+.||++..+.++-..++.+ +.-+ . ....+..+ + .....+..++.+
T Consensus 119 DHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~tiI~~~~~~~~Iy~~W~~~~g~~hlp~v~---f--t~~~li~~vfsl 193 (414)
T KOG1314|consen 119 DHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTIILVCAQYRGIYFRWYIKYGLRHLPIVF---F--TLSSLIALVFSL 193 (414)
T ss_pred ccCCcchhhcccccccHHHHHHHHHHHHhcccceeeehhHHHHHHHHHHHhhcccccCceee---c--cHHHHHHHHHHh
Confidence 99999999999999999999999998885543221111 1111 1 11111100 0 000111112222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHh----hhhhh-hhcCCCCCccCCCCHhHHhHHHHhcccC
Q 006702 473 IADFSLFFGVAVLTAVQASQISRNITTNEMAN----ALRYN-YLRGAGGRFRNPYDHGCKRNCSDFLING 537 (634)
Q Consensus 473 ~~~~~~~~~~~~l~~~~~~~i~~n~TT~E~~~----~~r~~-y~~~~~~~~~npyd~G~~~N~~~f~~~~ 537 (634)
-+.+...+.+++|++.|+.+|.+|+|.+|.+- ..|.. |..+..+++..|||.|.+.|++++|+..
T Consensus 194 gla~gv~la~t~Lf~~qlk~Il~nrt~IE~wi~~Ka~~rr~~~~~d~~~~f~ypydlgWr~n~r~vf~~~ 263 (414)
T KOG1314|consen 194 GLAIGVVLALTMLFFIQLKQILNNRTGIESWIVEKAMDRREYYFNDDEGEFTYPYDLGWRINLREVFFQN 263 (414)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHhhccCCCCceeeeccccccccHHHHhhhc
Confidence 23344456678899999999999999999776 34443 4445568899999999888999998755
No 5
>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]
Probab=100.00 E-value=6.5e-36 Score=308.24 Aligned_cols=155 Identities=26% Similarity=0.475 Sum_probs=116.7
Q ss_pred cccccccccccCCCCCCCCcchhhhhccCCcCccccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 006702 376 SQLCATCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWDFFLFLVLEVSAMLVTGAVTVIRVFTDPVAPSSFG 455 (634)
Q Consensus 376 ~~~C~~C~~~kP~Rs~HC~~C~~CV~rfDHHCpwv~ncIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (634)
.++|.+|+.+||+|||||++||+||+||||||||+|||||++|||+|+.|+++..+++++..++.++.+.........
T Consensus 113 ~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~-- 190 (299)
T KOG1311|consen 113 WKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKV-- 190 (299)
T ss_pred eEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--
Confidence 599999999999999999999999999999999999999999999999999988888877776666554332111000
Q ss_pred hhhh-hhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhhhcCCCCCc-cCCCCHhHHhHHHHh
Q 006702 456 AWMS-YASTHHIGALSFLIADFSLFFGVAVLTAVQASQISRNITTNEMANALRYNYLRGAGGRF-RNPYDHGCKRNCSDF 533 (634)
Q Consensus 456 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~n~TT~E~~~~~r~~y~~~~~~~~-~npyd~G~~~N~~~f 533 (634)
.|.. .........+++.++++++.+.++.|+.+|+++|.+|+||+|.++. +++ +. .+|||+|.++|+.+.
T Consensus 191 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e~~~~--~~~------~~~~~~~~~g~~~n~~~~ 262 (299)
T KOG1311|consen 191 NLTPVLIPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYESIKS--LDF------VSRSNPYDLGLLKNLQEV 262 (299)
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhhhhhc--ccc------ccccCCCchhHHHHHHHH
Confidence 0100 0001111223333456666777788999999999999999997765 221 12 499999999999999
Q ss_pred cccCCcc
Q 006702 534 LINGFNE 540 (634)
Q Consensus 534 ~~~~~~~ 540 (634)
|+.+.+.
T Consensus 263 ~~~~~~~ 269 (299)
T KOG1311|consen 263 FGGPLPL 269 (299)
T ss_pred hCCCCCc
Confidence 9988665
No 6
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=7.2e-35 Score=295.56 Aligned_cols=217 Identities=17% Similarity=0.161 Sum_probs=196.3
Q ss_pred ccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 006702 32 VDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWS 111 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A 111 (634)
..+..+.||||.|+..|+.++++.|++ .|++++..+ |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 25 ~~D~~G~TpLh~Aa~~g~~eiv~~Ll~-~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~A 101 (284)
T PHA02791 25 KADVHGHSALYYAIADNNVRLVCTLLN-AGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYA 101 (284)
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHH-CcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 357789999999999999999999998 788887764 68999999999999999999999999999999999999999
Q ss_pred HHhCCHHHHHHHHhcCCCCCccccCCC-hHHHHHHHhCCHHHHHHHHHccCCCCCCCC-CCCChHHHHHHhcCCHHHHHH
Q 006702 112 AVRGAIQVAELLLREGARVNAADMYGY-QTTHVAAQYGQTAFLYHIVSKWNADPDVPD-NDGRSPLHWAAYKGFADCIRL 189 (634)
Q Consensus 112 ~~~g~~~iv~~Ll~~gad~~~~d~~g~-t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh~A~~~g~~~~v~~ 189 (634)
+..|+.+++++|+++|++++.++..|. ||||+|+..|+.+++++|+++ +.+ ..| ..|.||||+|+..|+.+++++
T Consensus 102 a~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~-~~~--~~d~~~g~TpLh~Aa~~g~~eiv~l 178 (284)
T PHA02791 102 VDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPS--TFDLAILLSCIHITIKNGHVDMMIL 178 (284)
T ss_pred HHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhc-CCc--ccccccCccHHHHHHHcCCHHHHHH
Confidence 999999999999999999999999885 899999999999999999987 332 223 358999999999999999999
Q ss_pred HhhcCCCCCCCCCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHH
Q 006702 190 LLFLDAYRGRQDKEGCTP-LHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARR 263 (634)
Q Consensus 190 Ll~~ga~~~~~d~~g~Tp-Lh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~ 263 (634)
|+++|++++.+|..|.|| ||+|+..|+.++|++|+++| ++++.+|.+| +++ ++.|++++|.+...
T Consensus 179 LL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~G--a~in~~~~~~-~~l------~~~e~~~~ll~~~~ 244 (284)
T PHA02791 179 LLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYD--INIYSVNLEN-VLL------DDAEIAKMIIEKHV 244 (284)
T ss_pred HHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCC--CCCccCcccC-ccC------CCHHHHHHHHHhhh
Confidence 999999999999999987 99999999999999999999 6788999855 555 78899999876543
No 7
>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]
Probab=100.00 E-value=6.5e-36 Score=298.49 Aligned_cols=213 Identities=23% Similarity=0.304 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHhhhccCCCccccCCCCCCCCCCch-hhhhhhccCcc--hhcccccccccccccccCCCCCCCCcch
Q 006702 321 SGVFLATGGLVLFYRCSRKDPGYIRMNVHDPQNMKDDE-PLLKIEMNNPA--LLAGNWSQLCATCKIVRPLRAKHCSTCD 397 (634)
Q Consensus 321 ~~i~l~~~~l~~~~~~~~~dPG~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~C~~C~~~kP~Rs~HC~~C~ 397 (634)
.+.++.++.++.+++++++|||.+|.....+.++++.. .....+.+.+. .......++|.+|+.+||+|||||++|+
T Consensus 51 ~~~~ll~m~~~sy~~~vf~~pg~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC~ 130 (307)
T KOG1315|consen 51 LFHLLLIMFLWSYFRTVFTDPGRVPDSYRPSVEDEDSLENGSDNERDLPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVCN 130 (307)
T ss_pred HHHHHHHHHHHHHHheeEecCCCCccccCCCcCccccccccCcccccceeeEecCCCCceeecccccccCCccccchhhh
Confidence 34456777889999999999999987664433222110 00011111111 1122347999999999999999999999
Q ss_pred hhhhccCCcCccccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhccccchhhHHHHHHHH
Q 006702 398 RCVEQFDHHCPWVSNCIGKKNKWDFFLFLVLEVSAMLVTGAVTVIRVFTDPVAPSSFGAWMSYASTHHIGALSFLIADFS 477 (634)
Q Consensus 398 ~CV~rfDHHCpwv~ncIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (634)
|||++|||||||+|||||.+|||+|++|++++.+.+++..+..+..+.......... ........++.+++.+.
T Consensus 131 rCvLKmDHHCpWi~nCVgf~NyKfF~lfl~y~~l~~~~~lv~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 204 (307)
T KOG1315|consen 131 RCVLKMDHHCPWINNCVGFRNYKFFLLFLFYTNLYSIYVLVTTLIGFTKYFQGGAGP------SSLLLFFIVFLFLVAIA 204 (307)
T ss_pred hhhhccccCCcceeceecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC------chhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988666555443322211000000 01112223334445555
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhhhcCCCCCccCCCCHhHHhHHHHhcccCCccccccccc
Q 006702 478 LFFGVAVLTAVQASQISRNITTNEMANALRYNYLRGAGGRFRNPYDHGCKRNCSDFLINGFNEDVECVED 547 (634)
Q Consensus 478 ~~~~~~~l~~~~~~~i~~n~TT~E~~~~~r~~y~~~~~~~~~npyd~G~~~N~~~f~~~~~~~~~~~~~~ 547 (634)
+.+.+..|+++|+++|++|+||+|..+...+.. ++...|.|+. ..|+.++|+.+. -.|.+|.
T Consensus 205 f~i~l~~~l~~h~~Li~~N~TTiE~~~~~~~~~----~~~~~~~~~~--~~n~~~vfg~~~--~~wl~P~ 266 (307)
T KOG1315|consen 205 FSISLSGLLCFHTYLILKNKTTIEAYKSPVFRS----GLHNKNGFNL--YVNFREVFGSNL--LYWLLPI 266 (307)
T ss_pred HHHHHHHHHHHHHHHHHcCchhHhhhccccccc----cccccCCcce--eecHHHHhCCCc--eEEeccc
Confidence 666677799999999999999999776542221 2233577777 899999997663 4444443
No 8
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=312.22 Aligned_cols=224 Identities=26% Similarity=0.312 Sum_probs=204.1
Q ss_pred ccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCC----------------
Q 006702 32 VDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGG---------------- 95 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~ga---------------- 95 (634)
..++.+.+||+.|++.|+.+++++|++ .|++++..+..|.||||.|+..|+.+++++|+++|+
T Consensus 30 ~~~~~~~tpL~~A~~~g~~~iv~~Ll~-~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~ 108 (434)
T PHA02874 30 ISVDETTTPLIDAIRSGDAKIVELFIK-HGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIK 108 (434)
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHH
Confidence 345668899999999999999999998 899999999999999999999999999999988764
Q ss_pred -------CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCC
Q 006702 96 -------DVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPD 168 (634)
Q Consensus 96 -------d~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d 168 (634)
+++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++. |++++..|
T Consensus 109 ~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~-g~~~n~~~ 187 (434)
T PHA02874 109 TILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEK-GAYANVKD 187 (434)
T ss_pred HHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHC-CCCCCCCC
Confidence 4667888999999999999999999999999999999999999999999999999999999988 99999999
Q ss_pred CCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHh
Q 006702 169 NDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASD 248 (634)
Q Consensus 169 ~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~ 248 (634)
..|.||||+|+..|+.+++++|++.|++++.++..|.||||.|+..+. +++++|+ .| .+++.+|..|.||||+|+.
T Consensus 188 ~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~--~~in~~d~~G~TpLh~A~~ 263 (434)
T PHA02874 188 NNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NN--ASINDQDIDGSTPLHHAIN 263 (434)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cC--CCCCCcCCCCCCHHHHHHh
Confidence 999999999999999999999999999999999999999999998765 6677776 45 5788999999999999998
Q ss_pred cC-cHHHHHHHHHH
Q 006702 249 KN-HRQVAFFLGNA 261 (634)
Q Consensus 249 ~~-~~~i~~~L~~~ 261 (634)
.+ +.+++++|.+.
T Consensus 264 ~~~~~~iv~~Ll~~ 277 (434)
T PHA02874 264 PPCDIDIIDILLYH 277 (434)
T ss_pred cCCcHHHHHHHHHC
Confidence 75 78899988654
No 9
>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding
Probab=100.00 E-value=3.1e-36 Score=286.73 Aligned_cols=171 Identities=30% Similarity=0.535 Sum_probs=118.9
Q ss_pred HHHHhhhccCCCccccCCCCCCCCCCc-hhhhhhhccCcchhcccccccccccccccCCCCCCCCcchhhhhccCCcCcc
Q 006702 331 VLFYRCSRKDPGYIRMNVHDPQNMKDD-EPLLKIEMNNPALLAGNWSQLCATCKIVRPLRAKHCSTCDRCVEQFDHHCPW 409 (634)
Q Consensus 331 ~~~~~~~~~dPG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~rfDHHCpw 409 (634)
++|+++..+|||++|+...+....... +..........+....+..++|.+|+.+||+|||||+.|++||.||||||||
T Consensus 2 ~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w 81 (174)
T PF01529_consen 2 WSYFLTIFIDPGYVPRSNPDEDQRQEEKEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHCPW 81 (174)
T ss_pred EEehhhheECCcccCCccccccccccccccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccchh
Confidence 457889999999999872211111111 1111111111122244557999999999999999999999999999999999
Q ss_pred ccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhccccchhhHHHHHHHHHHHHHHHHHHHH
Q 006702 410 VSNCIGKKNKWDFFLFLVLEVSAMLVTGAVTVIRVFTDPVAPSSFGAWMSYASTHHIGALSFLIADFSLFFGVAVLTAVQ 489 (634)
Q Consensus 410 v~ncIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 489 (634)
+|||||++|||+|++|+++..+.+++.....+..+............+ .......+++++++++++++++.++++|
T Consensus 82 ~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 157 (174)
T PF01529_consen 82 LGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSSFW----IFSNFSSIFLLIISIFFFIFVGFLLIFQ 157 (174)
T ss_pred hccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc----cchhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888777766655444322111111000 0001112455556677778889999999
Q ss_pred HHHHhhcchhHHHHhh
Q 006702 490 ASQISRNITTNEMANA 505 (634)
Q Consensus 490 ~~~i~~n~TT~E~~~~ 505 (634)
+++|++|+||+|.+|+
T Consensus 158 ~~~i~~n~Tt~E~~~~ 173 (174)
T PF01529_consen 158 LYLILRNITTYERIKR 173 (174)
T ss_pred HHHHHcCCcHHHHHHc
Confidence 9999999999999875
No 10
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=319.04 Aligned_cols=248 Identities=24% Similarity=0.300 Sum_probs=224.9
Q ss_pred ccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHH-----HHHcCCHHHHHHHHhcCCCCCCCCCCCCc
Q 006702 32 VDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQW-----AALNNRTAAAQYIIEHGGDVNAADHTGQT 106 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~-----Aa~~g~~~~v~~Ll~~gad~n~~~~~g~t 106 (634)
..+..+.+|||.|++.|+.++++.|++ .|++++..+..+.||||+ |+..++.+++++|+++|++++..+..|.|
T Consensus 30 ~~~~~~~t~L~~A~~~~~~~ivk~Ll~-~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~t 108 (480)
T PHA03100 30 YSYKKPVLPLYLAKEARNIDVVKILLD-NGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGIT 108 (480)
T ss_pred hhhcccchhhhhhhccCCHHHHHHHHH-cCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCc
Confidence 346678899999999999999999998 799999999999999999 99999999999999999999999999999
Q ss_pred HHHHHH--HhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhC--CHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcC
Q 006702 107 ALHWSA--VRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYG--QTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKG 182 (634)
Q Consensus 107 pLh~A~--~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g--~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g 182 (634)
|||+|+ ..|+.+++++|+++|++++..+..|.||||+|+..+ +.+++++|++. |++++.+|..|.||||+|+..|
T Consensus 109 pL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~-g~din~~d~~g~tpL~~A~~~~ 187 (480)
T PHA03100 109 PLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDK-GVDINAKNRYGYTPLHIAVEKG 187 (480)
T ss_pred hhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHC-CCCcccccCCCCCHHHHHHHhC
Confidence 999999 999999999999999999999999999999999999 99999999988 9999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCCCCCCCC------CcHHHHHHHcCC--HHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHH
Q 006702 183 FADCIRLLLFLDAYRGRQDKEG------CTPLHWAAIRGN--LEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQV 254 (634)
Q Consensus 183 ~~~~v~~Ll~~ga~~~~~d~~g------~TpLh~A~~~g~--~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i 254 (634)
+.+++++|++.|++++..+..| .||||+|+..|+ .+++++|+++| ++++.+|..|.||||+|+..++.++
T Consensus 188 ~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g--~din~~d~~g~TpL~~A~~~~~~~i 265 (480)
T PHA03100 188 NIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYG--VPINIKDVYGFTPLHYAVYNNNPEF 265 (480)
T ss_pred CHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999999999 899999999999 99999999999 6788999999999999999999999
Q ss_pred HHHHHHHHH-HhcccCCCCCCcccccccCc
Q 006702 255 AFFLGNARR-LLDKRCDGNSPIGKISKLGL 283 (634)
Q Consensus 255 ~~~L~~~~~-l~~~~~~~~~~~~~~~~~g~ 283 (634)
+++|.+.+. ....+..+.+|+..+...+.
T Consensus 266 v~~Ll~~gad~n~~d~~g~tpl~~A~~~~~ 295 (480)
T PHA03100 266 VKYLLDLGANPNLVNKYGDTPLHIAILNNN 295 (480)
T ss_pred HHHHHHcCCCCCccCCCCCcHHHHHHHhCC
Confidence 999865443 22233334444444444333
No 11
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=309.95 Aligned_cols=190 Identities=18% Similarity=0.239 Sum_probs=93.2
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcC--CHHHHHHHHhcCCCCCC-CCCCCCcHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNN--RTAAAQYIIEHGGDVNA-ADHTGQTALHW 110 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g--~~~~v~~Ll~~gad~n~-~~~~g~tpLh~ 110 (634)
+..+.||||.|++.|+.++++.|++ .|++++.+|..|.||||+|+..+ ..+++++|+++|+++|. .|..|.||||
T Consensus 69 d~~G~TpLh~Aa~~g~~eiv~lLL~-~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~- 146 (446)
T PHA02946 69 DDDGNYPLHIASKINNNRIVAMLLT-HGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL- 146 (446)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH-CcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-
Confidence 3444555555555555555555554 44555555555555555554433 24445555555555543 3444555554
Q ss_pred HHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCC--HHHHHHHHHccCCCCCCCCCCCChHHHHHHhcC--CHHH
Q 006702 111 SAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQ--TAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKG--FADC 186 (634)
Q Consensus 111 A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~--~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g--~~~~ 186 (634)
|+..|+.+++++|+++|++++.+|..|.||||.|+..++ .+++++|++. |++++.+|.+|.||||+|+..+ +.++
T Consensus 147 aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~-Gadin~~d~~G~TpLH~Aa~~~~~~~~i 225 (446)
T PHA02946 147 ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKL-GISPSKPDHDGNTPLHIVCSKTVKNVDI 225 (446)
T ss_pred HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCCcHHH
Confidence 333445555555555555555555555555555444322 3444444444 5555555555555555555443 3445
Q ss_pred HHHHhhcCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHHcC
Q 006702 187 IRLLLFLDAYRGRQDKEGCTPLHWAAIRGN-LEACTVLVQAG 227 (634)
Q Consensus 187 v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~-~~iv~~Ll~~g 227 (634)
+++|++ |++++.+|..|.||||+|+..++ .+++++|+++|
T Consensus 226 v~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g 266 (446)
T PHA02946 226 INLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTS 266 (446)
T ss_pred HHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCC
Confidence 554442 45555555555555555555444 24455555444
No 12
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-35 Score=263.38 Aligned_cols=185 Identities=31% Similarity=0.428 Sum_probs=176.4
Q ss_pred CCCCcccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCC
Q 006702 27 SNGVVVDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEH-GGDVNAADHTGQ 105 (634)
Q Consensus 27 ~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~-gad~n~~~~~g~ 105 (634)
.+....+|+++++|||+|+..|+.+++++|+++.+..+|.+|..|+||||+||..|+.++|+.|+.+ |+|+|..+..|.
T Consensus 28 kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~ 107 (226)
T KOG4412|consen 28 KSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQ 107 (226)
T ss_pred hhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCc
Confidence 3444567779999999999999999999999888999999999999999999999999999999998 999999999999
Q ss_pred cHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHH
Q 006702 106 TALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFAD 185 (634)
Q Consensus 106 tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~ 185 (634)
|+||+|+..|..+|+++|+++|+.++.+|+.|.||||-|+.-|+.+++++|+.. ++.+|.+|+.|.||||.|...|+.+
T Consensus 108 T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~-~a~~n~qDk~G~TpL~~al~e~~~d 186 (226)
T KOG4412|consen 108 TCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQ-GAPLNTQDKYGFTPLHHALAEGHPD 186 (226)
T ss_pred ceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhc-CCCCCcccccCccHHHHHHhccCch
Confidence 999999999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 006702 186 CIRLLLFLDAYRGRQDKEGCTPLHWAAI 213 (634)
Q Consensus 186 ~v~~Ll~~ga~~~~~d~~g~TpLh~A~~ 213 (634)
+..+|++.|++.+..|++| ||+..|+-
T Consensus 187 ~a~lLV~~gAd~~~edke~-t~~~~a~~ 213 (226)
T KOG4412|consen 187 VAVLLVRAGADTDREDKEG-TALRIACN 213 (226)
T ss_pred HHHHHHHhccceeeccccC-chHHHHHH
Confidence 9999999999999999999 99887763
No 13
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=8.6e-34 Score=309.25 Aligned_cols=218 Identities=26% Similarity=0.344 Sum_probs=203.1
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHH
Q 006702 39 NDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQ 118 (634)
Q Consensus 39 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~ 118 (634)
..|..|+..|+++.++.|++..+..++..+..|.||||.|+..|+.++|++|+++|+++|..+..|.||||.|+..|+.+
T Consensus 3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~ 82 (434)
T PHA02874 3 QDLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHD 82 (434)
T ss_pred HHHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 47899999999999999999778888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCC-----------------------CCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHH
Q 006702 119 VAELLLREGA-----------------------RVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPL 175 (634)
Q Consensus 119 iv~~Ll~~ga-----------------------d~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L 175 (634)
++++|+++|+ +++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.|||
T Consensus 83 iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~-gad~n~~d~~g~tpL 161 (434)
T PHA02874 83 IIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEY-GADVNIEDDNGCYPI 161 (434)
T ss_pred HHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhC-CCCCCCcCCCCCCHH
Confidence 9999988765 4667889999999999999999999999987 999999999999999
Q ss_pred HHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHH
Q 006702 176 HWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVA 255 (634)
Q Consensus 176 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~ 255 (634)
|+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++.| ++++.++..|.||||.|+..+. +++
T Consensus 162 h~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g--~~i~~~~~~g~TpL~~A~~~~~-~~i 238 (434)
T PHA02874 162 HIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHG--NHIMNKCKNGFTPLHNAIIHNR-SAI 238 (434)
T ss_pred HHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC--CCCcCCCCCCCCHHHHHHHCCh-HHH
Confidence 9999999999999999999999999999999999999999999999999999 5678899999999999999876 455
Q ss_pred HHHHH
Q 006702 256 FFLGN 260 (634)
Q Consensus 256 ~~L~~ 260 (634)
++|..
T Consensus 239 ~~Ll~ 243 (434)
T PHA02874 239 ELLIN 243 (434)
T ss_pred HHHHc
Confidence 55543
No 14
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=8.9e-34 Score=307.71 Aligned_cols=219 Identities=22% Similarity=0.271 Sum_probs=198.2
Q ss_pred hhhHHHHHH--HcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q 006702 37 LRNDVYTAA--AYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVR 114 (634)
Q Consensus 37 ~~~~L~~Aa--~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~ 114 (634)
..+.||.++ ..++.++++.|++ .|++++.+|..|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..
T Consensus 37 ~~~~Lh~~~~~~~~~~~iv~~Ll~-~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~ 115 (446)
T PHA02946 37 NYHILHAYCGIKGLDERFVEELLH-RGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGT 115 (446)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHH-CcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 367888765 4457899999998 8999999999999999999999999999999999999999999999999999887
Q ss_pred C--CHHHHHHHHhcCCCCCc-cccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCC--HHHHHH
Q 006702 115 G--AIQVAELLLREGARVNA-ADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGF--ADCIRL 189 (634)
Q Consensus 115 g--~~~iv~~Ll~~gad~~~-~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~--~~~v~~ 189 (634)
+ ..+++++|+++|++++. .|..|.|||| |+..++.++++.|++. |++++.+|..|.||||+|+..++ .+++++
T Consensus 116 ~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~-gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~ 193 (446)
T PHA02946 116 DDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSI-GFEARIVDKFGKNHIHRHLMSDNPKASTISW 193 (446)
T ss_pred CCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhc-cccccccCCCCCCHHHHHHHhcCCCHHHHHH
Confidence 6 48999999999999995 6899999997 6777999999999987 99999999999999999987654 689999
Q ss_pred HhhcCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCc-HHHHHHHHHH
Q 006702 190 LLFLDAYRGRQDKEGCTPLHWAAIRG--NLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNH-RQVAFFLGNA 261 (634)
Q Consensus 190 Ll~~ga~~~~~d~~g~TpLh~A~~~g--~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~-~~i~~~L~~~ 261 (634)
|++.|++++.+|.+|.||||+|+..+ +.+++++|++ | ++++.+|..|.||||+|++.++ .+++++|...
T Consensus 194 Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-g--adin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~ 265 (446)
T PHA02946 194 MMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-S--TDVNKQNKFGDSPLTLLIKTLSPAHLINKLLST 265 (446)
T ss_pred HHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-C--CCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhC
Confidence 99999999999999999999999986 7899999985 6 6889999999999999999988 4788777554
No 15
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=306.84 Aligned_cols=221 Identities=23% Similarity=0.326 Sum_probs=208.4
Q ss_pred hhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCC
Q 006702 37 LRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGA 116 (634)
Q Consensus 37 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~ 116 (634)
.+++|+.|++.|+.++++.|++ .|++++..+..|.||||+|+..|+.+++++|+++|++++..+..+.||||.|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~-~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~ 80 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLD-IGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGD 80 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHH-CCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCC
Confidence 3678999999999999999998 799999999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHHHhcCCCCC-ccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCC
Q 006702 117 IQVAELLLREGARVN-AADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDA 195 (634)
Q Consensus 117 ~~iv~~Ll~~gad~~-~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga 195 (634)
.+++++|++.|++.+ ..+..|.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..|+.+++++|++.|+
T Consensus 81 ~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~-gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~ 159 (413)
T PHA02875 81 VKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIAR-GADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKA 159 (413)
T ss_pred HHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence 999999999998774 4577899999999999999999999988 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCC-CHHHHHHhcCcHHHHHHHHHH
Q 006702 196 YRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGL-TPAQLASDKNHRQVAFFLGNA 261 (634)
Q Consensus 196 ~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~-Tpl~~A~~~~~~~i~~~L~~~ 261 (634)
+++.+|..|.||||+|+..|+.+++++|+++| ++++..+..|. ||+++|+..++.+++++|.+.
T Consensus 160 ~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~g--a~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~ 224 (413)
T PHA02875 160 CLDIEDCCGCTPLIIAMAKGDIAICKMLLDSG--ANIDYFGKNGCVAALCYAIENNKIDIVRLFIKR 224 (413)
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC--CCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHC
Confidence 99999999999999999999999999999999 56777887774 899999999999999997653
No 16
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=311.73 Aligned_cols=253 Identities=26% Similarity=0.298 Sum_probs=222.0
Q ss_pred cccccchhhHHHHHHHcC---CHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcC-CHHHHHHHHhcCCCCCCCCCCCCc
Q 006702 31 VVDEESLRNDVYTAAAYG---DLEKLQRLVECEGCSVSEPDGLGYYALQWAALNN-RTAAAQYIIEHGGDVNAADHTGQT 106 (634)
Q Consensus 31 ~~~~~~~~~~L~~Aa~~g---~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g-~~~~v~~Ll~~gad~n~~~~~g~t 106 (634)
...+..+.||||.|+..| +.++++.|++ .|++++.++..|.||||+|+..| ..+++++|+++|+++|.+|..|.|
T Consensus 41 n~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~-~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~t 119 (471)
T PHA03095 41 NFRGEYGKTPLHLYLHYSSEKVKDIVRLLLE-AGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRT 119 (471)
T ss_pred ccCCCCCCCHHHHHHHhcCCChHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCC
Confidence 445677899999999999 9999999998 89999999999999999999999 599999999999999999999999
Q ss_pred HHHHHH--HhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhC--CHHHHHHHHHccCCCCCCCCCCCChHHHHHHhc-
Q 006702 107 ALHWSA--VRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYG--QTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYK- 181 (634)
Q Consensus 107 pLh~A~--~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g--~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~- 181 (634)
|||+|+ ..++.+++++|+++|++++.+|..|.||||+|+..+ +.++++.|++. |++++..|..|.||||+|+..
T Consensus 120 pLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~-g~~~~~~d~~g~t~Lh~~~~~~ 198 (471)
T PHA03095 120 PLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDA-GADVYAVDDRFRSLLHHHLQSF 198 (471)
T ss_pred HHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHHC
Confidence 999999 556899999999999999999999999999999876 57899999988 999999999999999999875
Q ss_pred -CCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCH--HHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHH
Q 006702 182 -GFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNL--EACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFL 258 (634)
Q Consensus 182 -g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~--~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L 258 (634)
+..++++.|++.|++++.+|..|.||||+|+..|+. .+++.|++.| ++++.+|..|.||||+|+..|+.+++++|
T Consensus 199 ~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g--~din~~d~~g~TpLh~A~~~~~~~~v~~L 276 (471)
T PHA03095 199 KPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAG--ISINARNRYGQTPLHYAAVFNNPRACRRL 276 (471)
T ss_pred CCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 678999999999999999999999999999999875 6889999998 68889999999999999999999999998
Q ss_pred HHHHH-HhcccCCCCCCcccccccCcchhH
Q 006702 259 GNARR-LLDKRCDGNSPIGKISKLGLAPAL 287 (634)
Q Consensus 259 ~~~~~-l~~~~~~~~~~~~~~~~~g~~~l~ 287 (634)
.+.+. +...+..+.+|+..+...|...++
T Consensus 277 L~~gad~n~~~~~g~tpl~~A~~~~~~~~v 306 (471)
T PHA03095 277 IALGADINAVSSDGNTPLSLMVRNNNGRAV 306 (471)
T ss_pred HHcCCCCcccCCCCCCHHHHHHHhCCHHHH
Confidence 65432 223344455555555444444433
No 17
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=283.20 Aligned_cols=206 Identities=17% Similarity=0.115 Sum_probs=188.1
Q ss_pred cCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhc
Q 006702 47 YGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLRE 126 (634)
Q Consensus 47 ~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~ 126 (634)
.++.++++.|++ .++ +.+|..|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|+++
T Consensus 9 ~~~~~~~~~Lis-~~a--~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~ 83 (284)
T PHA02791 9 WKSKQLKSFLSS-KDA--FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFS 83 (284)
T ss_pred cCHHHHHHHHHh-CCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHC
Confidence 577888888888 565 5689999999999999999999999999999998864 68999999999999999999999
Q ss_pred CCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCC-ChHHHHHHhcCCHHHHHHHhhcCCCCCCCC-CCC
Q 006702 127 GARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDG-RSPLHWAAYKGFADCIRLLLFLDAYRGRQD-KEG 204 (634)
Q Consensus 127 gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g-~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g 204 (634)
|++++.+|..|.||||+|+..|+.++++.|++. |++++.++..| .||||+|+..|+.+++++|++.+.+. .| ..|
T Consensus 84 Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~-gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g 160 (284)
T PHA02791 84 GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAIL 160 (284)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccC
Confidence 999999999999999999999999999999987 99999999888 59999999999999999999987643 23 358
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCH-HHHHHhcCcHHHHHHHHHHH
Q 006702 205 CTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTP-AQLASDKNHRQVAFFLGNAR 262 (634)
Q Consensus 205 ~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tp-l~~A~~~~~~~i~~~L~~~~ 262 (634)
.||||+|+..|+.+++++|+++| ++++.+|..|.|| ||+|++.++.+++++|.+.+
T Consensus 161 ~TpLh~Aa~~g~~eiv~lLL~~g--Ad~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~G 217 (284)
T PHA02791 161 LSCIHITIKNGHVDMMILLLDYM--TSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYD 217 (284)
T ss_pred ccHHHHHHHcCCHHHHHHHHHCC--CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCC
Confidence 99999999999999999999999 5778899999987 99999999999999986543
No 18
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=310.57 Aligned_cols=225 Identities=25% Similarity=0.388 Sum_probs=216.2
Q ss_pred cccchhhHHHH-----HHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHH--HcCCHHHHHHHHhcCCCCCCCCCCCC
Q 006702 33 DEESLRNDVYT-----AAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAA--LNNRTAAAQYIIEHGGDVNAADHTGQ 105 (634)
Q Consensus 33 ~~~~~~~~L~~-----Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa--~~g~~~~v~~Ll~~gad~n~~~~~g~ 105 (634)
.+..+.++|+. |+..|+.++++.|++ .|++++..|..|.||||+|+ ..|+.+++++|+++|++++..+..|.
T Consensus 64 ~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~-~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~ 142 (480)
T PHA03100 64 STKNNSTPLHYLSNIKYNLTDVKEIVKLLLE-YGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGE 142 (480)
T ss_pred ccccCcCHHHHHHHHHHHhhchHHHHHHHHH-CCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCC
Confidence 45567899999 999999999999998 89999999999999999999 99999999999999999999999999
Q ss_pred cHHHHHHHhC--CHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCC------ChHHHH
Q 006702 106 TALHWSAVRG--AIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDG------RSPLHW 177 (634)
Q Consensus 106 tpLh~A~~~g--~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g------~t~Lh~ 177 (634)
||||+|+..| +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++..+..| .||||+
T Consensus 143 t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~~~~~~t~l~~ 221 (480)
T PHA03100 143 NLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDN-GADINAGDIETLLFTIFETPLHI 221 (480)
T ss_pred cHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHc-CCCccCCCCCCCcHHHHHhHHHH
Confidence 9999999999 99999999999999999999999999999999999999999988 99999999999 899999
Q ss_pred HHhcCC--HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHH
Q 006702 178 AAYKGF--ADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVA 255 (634)
Q Consensus 178 A~~~g~--~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~ 255 (634)
|+..|+ .+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++| +|++.+|..|.||+++|+..++.+++
T Consensus 222 a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~g--ad~n~~d~~g~tpl~~A~~~~~~~iv 299 (480)
T PHA03100 222 AACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLG--ANPNLVNKYGDTPLHIAILNNNKEIF 299 (480)
T ss_pred HHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCccCCCCCcHHHHHHHhCCHHHH
Confidence 999999 99999999999999999999999999999999999999999999 58889999999999999999999999
Q ss_pred HHHHHH
Q 006702 256 FFLGNA 261 (634)
Q Consensus 256 ~~L~~~ 261 (634)
++|.+.
T Consensus 300 ~~Ll~~ 305 (480)
T PHA03100 300 KLLLNN 305 (480)
T ss_pred HHHHhc
Confidence 998653
No 19
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3.9e-33 Score=307.67 Aligned_cols=239 Identities=20% Similarity=0.216 Sum_probs=184.7
Q ss_pred cchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q 006702 35 ESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVR 114 (634)
Q Consensus 35 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~ 114 (634)
....+|||.||+.|+.++|+.|++ .|++++.+|..|.||||+||..|+.+++++|++.+.+.+. ..+.+||+.|+..
T Consensus 35 ~~~~tPLh~A~~~g~~e~vk~Ll~-~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~~l~~a~~~ 111 (477)
T PHA02878 35 LIPFIPLHQAVEARNLDVVKSLLT-RGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV--FYTLVAIKDAFNN 111 (477)
T ss_pred ccCcchHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc--ccchhhHHHHHHc
Confidence 346789999999999999999998 7999999999999999999999988888888877655443 3556777777766
Q ss_pred CCHH---------------------------------HHHHHHhcCCCCCccccC-CChHHHHHHHhCCHHHHHHHHHcc
Q 006702 115 GAIQ---------------------------------VAELLLREGARVNAADMY-GYQTTHVAAQYGQTAFLYHIVSKW 160 (634)
Q Consensus 115 g~~~---------------------------------iv~~Ll~~gad~~~~d~~-g~t~L~~Aa~~g~~~~v~~Ll~~~ 160 (634)
|+.+ ++++|+++|++++.++.. |.||||+|+..|+.+++++|++.
T Consensus 112 ~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~- 190 (477)
T PHA02878 112 RNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSY- 190 (477)
T ss_pred CCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHC-
Confidence 5432 666777788888877777 88888888888888888887776
Q ss_pred CCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCccccCC-C
Q 006702 161 NADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIR-GNLEACTVLVQAGKKEDLMVTDN-T 238 (634)
Q Consensus 161 ~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~-g~~~iv~~Ll~~g~~~d~~~~d~-~ 238 (634)
|++++.+|..|.||||.|+..|+.+++++|++.|++++.+|..|.||||+|+.. ++.+++++|+++| ++++.++. .
T Consensus 191 gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~g--advn~~~~~~ 268 (477)
T PHA02878 191 GANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHG--VDVNAKSYIL 268 (477)
T ss_pred CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcC--CCCCccCCCC
Confidence 788888888888888888888888888888888888888888888888888765 5778888888887 45666664 6
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHHH-HHhcccCCCCCCccccccc
Q 006702 239 GLTPAQLASDKNHRQVAFFLGNAR-RLLDKRCDGNSPIGKISKL 281 (634)
Q Consensus 239 g~Tpl~~A~~~~~~~i~~~L~~~~-~l~~~~~~~~~~~~~~~~~ 281 (634)
|.||||+| .++.+++++|.+.+ .+...+.+|.+|++.+...
T Consensus 269 g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~ 310 (477)
T PHA02878 269 GLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQ 310 (477)
T ss_pred CCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHH
Confidence 78888888 35567777766543 3444566777777766553
No 20
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=5.9e-33 Score=310.39 Aligned_cols=245 Identities=20% Similarity=0.185 Sum_probs=200.7
Q ss_pred ccchhhHHHHHHH--cCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCC--HHHHHHHHhcCCCCCCCCCCCCcHHH
Q 006702 34 EESLRNDVYTAAA--YGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNR--TAAAQYIIEHGGDVNAADHTGQTALH 109 (634)
Q Consensus 34 ~~~~~~~L~~Aa~--~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~--~~~v~~Ll~~gad~n~~~~~g~tpLh 109 (634)
++.+.+|||.|+. .++.++++.|++ .|++++.+|..|.||||+|+..|+ .++|++|+++|+|+|.+|..|.||||
T Consensus 174 d~~G~TpLH~A~~n~~~~~eIVklLLe-~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh 252 (764)
T PHA02716 174 KKTGYGILHAYLGNMYVDIDILEWLCN-NGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIM 252 (764)
T ss_pred CCCCCcHHHHHHHhccCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 6778999998864 468899999998 899999999999999999999995 58999999999999999999999999
Q ss_pred HH-------------------------------------HHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHH--hCCH
Q 006702 110 WS-------------------------------------AVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQ--YGQT 150 (634)
Q Consensus 110 ~A-------------------------------------~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~--~g~~ 150 (634)
+| +..|+.+++++|+++|++++.+|..|+||||+|+. .++.
T Consensus 253 ~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~ 332 (764)
T PHA02716 253 TYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNIST 332 (764)
T ss_pred HHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCc
Confidence 65 44578899999999999999999999999998764 4678
Q ss_pred HHHHHHHHccCCCCCCCCCCCChHHHHHHh--------------cCCHHHHHHHhhcCCCCCCCCCCCCcHHHHH----H
Q 006702 151 AFLYHIVSKWNADPDVPDNDGRSPLHWAAY--------------KGFADCIRLLLFLDAYRGRQDKEGCTPLHWA----A 212 (634)
Q Consensus 151 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~--------------~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A----~ 212 (634)
+++++|++. |++++.+|..|.||||+|+. .++.+++++|++.|++++.+|..|.||||.+ .
T Consensus 333 eIVklLLe~-GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~ 411 (764)
T PHA02716 333 DIIKLLHEY-GNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQ 411 (764)
T ss_pred hHHHHHHHc-CCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHH
Confidence 999999987 99999999999999999875 3678999999999999999999999999942 2
Q ss_pred HcCCHHHHHHHHHcCCC-----------------------------------------------------------CCcc
Q 006702 213 IRGNLEACTVLVQAGKK-----------------------------------------------------------EDLM 233 (634)
Q Consensus 213 ~~g~~~iv~~Ll~~g~~-----------------------------------------------------------~d~~ 233 (634)
..++.+++++|++.|.. .+++
T Consensus 412 n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN 491 (764)
T PHA02716 412 NYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNA 491 (764)
T ss_pred hcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhcccc
Confidence 34678999998886421 1234
Q ss_pred ccCCCCCCHHHHHHhcCcHHHH-----HHHHHHHHHhcccCCCCCCcccccccCcchhHHHH
Q 006702 234 VTDNTGLTPAQLASDKNHRQVA-----FFLGNARRLLDKRCDGNSPIGKISKLGLAPALWCV 290 (634)
Q Consensus 234 ~~d~~g~Tpl~~A~~~~~~~i~-----~~L~~~~~l~~~~~~~~~~~~~~~~~g~~~l~~~~ 290 (634)
.+|..|.||||+|+..++.+++ ++|.+. +.+.+ ...+.|.+|+.+++
T Consensus 492 ~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~------GADIN----~~d~~G~TPLh~A~ 543 (764)
T PHA02716 492 VCETSGMTPLHVSIISHTNANIVMDSFVYLLSI------QYNIN----IPTKNGVTPLMLTM 543 (764)
T ss_pred ccCCCCCCHHHHHHHcCCccchhHHHHHHHHhC------CCCCc----ccCCCCCCHHHHHH
Confidence 5578899999999999887544 776543 22222 22455666666554
No 21
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.4e-32 Score=303.22 Aligned_cols=227 Identities=24% Similarity=0.286 Sum_probs=211.3
Q ss_pred cccccchhhHHHHHHHcC-CHHHHHHHHhccCCCCcCCCCCCchHHHHHH--HcCCHHHHHHHHhcCCCCCCCCCCCCcH
Q 006702 31 VVDEESLRNDVYTAAAYG-DLEKLQRLVECEGCSVSEPDGLGYYALQWAA--LNNRTAAAQYIIEHGGDVNAADHTGQTA 107 (634)
Q Consensus 31 ~~~~~~~~~~L~~Aa~~g-~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa--~~g~~~~v~~Ll~~gad~n~~~~~g~tp 107 (634)
+..+..+.||||.|+..| ..++++.|++ .|++++.+|..|.||||+|+ ..++.+++++|+++|++++.+|..|.||
T Consensus 77 n~~~~~g~TpLh~A~~~~~~~~iv~lLl~-~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tp 155 (471)
T PHA03095 77 NAPERCGFTPLHLYLYNATTLDVIKLLIK-AGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTP 155 (471)
T ss_pred CCCCCCCCCHHHHHHHcCCcHHHHHHHHH-cCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCH
Confidence 445668999999999999 5999999998 89999999999999999999 5678999999999999999999999999
Q ss_pred HHHHHHhC--CHHHHHHHHhcCCCCCccccCCChHHHHHHHh--CCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCC
Q 006702 108 LHWSAVRG--AIQVAELLLREGARVNAADMYGYQTTHVAAQY--GQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGF 183 (634)
Q Consensus 108 Lh~A~~~g--~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~--g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~ 183 (634)
||+|+..+ +.+++++|+++|++++..|..|.||||.|+.. +..++++.|++. |++++.+|..|.||||+|+..|.
T Consensus 156 L~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~-g~~~~~~d~~g~tpLh~Aa~~~~ 234 (471)
T PHA03095 156 LAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRA-GCDPAATDMLGNTPLHSMATGSS 234 (471)
T ss_pred HHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcCC
Confidence 99998876 68999999999999999999999999999986 678899999987 99999999999999999999987
Q ss_pred H--HHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHH
Q 006702 184 A--DCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNA 261 (634)
Q Consensus 184 ~--~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~ 261 (634)
. .+++.|++.|++++.+|..|.||||+|+..|+.+++++|+++| +|++.+|..|.||+++|+..++.++++.|.+.
T Consensus 235 ~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~g--ad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~ 312 (471)
T PHA03095 235 CKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALG--ADINAVSSDGNTPLSLMVRNNNGRAVRAALAK 312 (471)
T ss_pred chHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHhCCHHHHHHHHHh
Confidence 5 6889999999999999999999999999999999999999999 67889999999999999999999999998653
No 22
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=1.7e-32 Score=306.71 Aligned_cols=227 Identities=19% Similarity=0.200 Sum_probs=196.9
Q ss_pred CcccccchhhHHHHHHHcCC--HHHHHHHHhccCCCCcCCCCCCchHHHHH-----------------------------
Q 006702 30 VVVDEESLRNDVYTAAAYGD--LEKLQRLVECEGCSVSEPDGLGYYALQWA----------------------------- 78 (634)
Q Consensus 30 ~~~~~~~~~~~L~~Aa~~g~--~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A----------------------------- 78 (634)
++..+..+.||||.|++.|+ .++++.|++ .|++++.+|..|.||||.|
T Consensus 205 VN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe-~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~ 283 (764)
T PHA02716 205 VNLQNNHLITPLHTYLITGNVCASVIKKIIE-LGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPM 283 (764)
T ss_pred CCCCCCCCCCHHHHHHHcCCCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchh
Confidence 44567789999999999995 589999998 8999999999999999975
Q ss_pred --------HHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH--hCCHHHHHHHHhcCCCCCccccCCChHHHHHHH--
Q 006702 79 --------ALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAV--RGAIQVAELLLREGARVNAADMYGYQTTHVAAQ-- 146 (634)
Q Consensus 79 --------a~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~--~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~-- 146 (634)
+..|+.+++++|+++|+++|.+|..|+||||+|+. .++.+++++|+++|++++.+|..|.||||.|+.
T Consensus 284 ~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~l 363 (764)
T PHA02716 284 ILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSML 363 (764)
T ss_pred hhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhh
Confidence 45678899999999999999999999999999875 468999999999999999999999999999875
Q ss_pred ------------hCCHHHHHHHHHccCCCCCCCCCCCChHHHHH----HhcCCHHHHHHHhhcCC---------------
Q 006702 147 ------------YGQTAFLYHIVSKWNADPDVPDNDGRSPLHWA----AYKGFADCIRLLLFLDA--------------- 195 (634)
Q Consensus 147 ------------~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A----~~~g~~~~v~~Ll~~ga--------------- 195 (634)
.++.+++++|++. |++++.+|..|.||||.+ ...++.+++++|++.|+
T Consensus 364 av~~~ld~~~~~~~~~eVVklLL~~-GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~ 442 (764)
T PHA02716 364 SVVNILDPETDNDIRLDVIQCLISL-GADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIR 442 (764)
T ss_pred hhhccccccccccChHHHHHHHHHC-CCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhc
Confidence 3688999999987 999999999999999942 23467788888877542
Q ss_pred ----------------------------------------------CCCCCCCCCCcHHHHHHHcCCH-----HHHHHHH
Q 006702 196 ----------------------------------------------YRGRQDKEGCTPLHWAAIRGNL-----EACTVLV 224 (634)
Q Consensus 196 ----------------------------------------------~~~~~d~~g~TpLh~A~~~g~~-----~iv~~Ll 224 (634)
+++..|..|+||||+|+..|+. +++++|+
T Consensus 443 ~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL 522 (764)
T PHA02716 443 VDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLL 522 (764)
T ss_pred cCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHH
Confidence 2244577899999999999887 4559999
Q ss_pred HcCCCCCccccCCCCCCHHHHHHhcCcH-----HHHHHHHH
Q 006702 225 QAGKKEDLMVTDNTGLTPAQLASDKNHR-----QVAFFLGN 260 (634)
Q Consensus 225 ~~g~~~d~~~~d~~g~Tpl~~A~~~~~~-----~i~~~L~~ 260 (634)
+.| +|++.+|++|+||||+|+++++. +++++|.+
T Consensus 523 ~~G--ADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~ 561 (764)
T PHA02716 523 SIQ--YNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILD 561 (764)
T ss_pred hCC--CCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHh
Confidence 999 67889999999999999999976 88888755
No 23
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=1.5e-32 Score=294.05 Aligned_cols=260 Identities=27% Similarity=0.357 Sum_probs=226.7
Q ss_pred cccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 006702 31 VVDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHW 110 (634)
Q Consensus 31 ~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~ 110 (634)
+..+..+..|+|.|+..|+.+.++.|++ .++++|..|+.|.||||.||..++.|..+.|++.|+++-..|.+|.+|+|.
T Consensus 115 ~~~n~~~~aplh~A~~~~~~s~L~~Ll~-~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~ 193 (929)
T KOG0510|consen 115 PLRNLNKNAPLHLAADSGNYSCLKLLLD-YGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHE 193 (929)
T ss_pred ChhhhhccCchhhccccchHHHHHHHHH-hcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHH
Confidence 3456677888888888888888888888 678888888888889998888888888888888888888888888888888
Q ss_pred HHHhCCHHHHHHHHh-----cCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCC--------------CCCCCCCC
Q 006702 111 SAVRGAIQVAELLLR-----EGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNAD--------------PDVPDNDG 171 (634)
Q Consensus 111 A~~~g~~~iv~~Ll~-----~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~--------------~~~~d~~g 171 (634)
|+++|..++++..+. .+.+++.-+..|.||||.|++.|+.++++.+|+....+ ++..|++|
T Consensus 194 aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg 273 (929)
T KOG0510|consen 194 AARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDG 273 (929)
T ss_pred HHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccC
Confidence 888888888888887 66788888889999999999999999999988762211 35678999
Q ss_pred ChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCccccCCCCCCHHHHHHhcC
Q 006702 172 RSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQ-AGKKEDLMVTDNTGLTPAQLASDKN 250 (634)
Q Consensus 172 ~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~-~g~~~d~~~~d~~g~Tpl~~A~~~~ 250 (634)
.||||+|++.|+.++++.|+..|++++.++.++.||||.||..|+.+.|+.||+ .+ ...++..|..|.||||+|+..|
T Consensus 274 ~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~-~rllne~D~~g~tpLHlaa~~g 352 (929)
T KOG0510|consen 274 CTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESD-TRLLNESDLHGMTPLHLAAKSG 352 (929)
T ss_pred CchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcC-ccccccccccCCCchhhhhhcC
Confidence 999999999999999999999999999999999999999999999999999999 44 3578899999999999999999
Q ss_pred cHHHHHHHHHHHHHhcc----cCCCCCCcccccccCcchhHHHHHH
Q 006702 251 HRQVAFFLGNARRLLDK----RCDGNSPIGKISKLGLAPALWCVIL 292 (634)
Q Consensus 251 ~~~i~~~L~~~~~l~~~----~~~~~~~~~~~~~~g~~~l~~~~i~ 292 (634)
|..++++|.+.+++... +.+++++++.+.++|.+..+-.++.
T Consensus 353 H~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~ 398 (929)
T KOG0510|consen 353 HDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLIS 398 (929)
T ss_pred HHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHH
Confidence 99999999887776654 7889999999999998887766654
No 24
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.98 E-value=3.7e-31 Score=292.94 Aligned_cols=245 Identities=12% Similarity=0.130 Sum_probs=161.9
Q ss_pred cchhhHHHHHHHcC--CHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcC------CHHHHHHHHhcCCCCCCCCCCCCc
Q 006702 35 ESLRNDVYTAAAYG--DLEKLQRLVECEGCSVSEPDGLGYYALQWAALNN------RTAAAQYIIEHGGDVNAADHTGQT 106 (634)
Q Consensus 35 ~~~~~~L~~Aa~~g--~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g------~~~~v~~Ll~~gad~n~~~~~g~t 106 (634)
..+.++|+.++..+ +.++++.|++ .|+++|.++ .+.||||.|+.++ +.+++++|+++|+|+|.+|..|.|
T Consensus 33 ~~g~t~l~~~~~~~~~~~~iv~~Ll~-~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~t 110 (494)
T PHA02989 33 YRGNSILLLYLKRKDVKIKIVKLLID-NGADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVS 110 (494)
T ss_pred cCCCCHHHHHHhcCCCChHHHHHHHH-cCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCc
Confidence 34667776655443 6788888888 788888776 4688888887654 467888888888888888888888
Q ss_pred HHHHHHHh---CCHHHHHHHHhcCCCC-CccccCCChHHHHHHHh--CCHHHHHHHHHccCCCCCC-CCCCCChHHHHHH
Q 006702 107 ALHWSAVR---GAIQVAELLLREGARV-NAADMYGYQTTHVAAQY--GQTAFLYHIVSKWNADPDV-PDNDGRSPLHWAA 179 (634)
Q Consensus 107 pLh~A~~~---g~~~iv~~Ll~~gad~-~~~d~~g~t~L~~Aa~~--g~~~~v~~Ll~~~~~~~~~-~d~~g~t~Lh~A~ 179 (634)
|||.|+.. |+.+++++|+++|||+ +.+|..|.||||+|+.. ++.++++.|++. |++++. .+..|.||||.|+
T Consensus 111 pL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~-Gadi~~~~~~~g~tpL~~a~ 189 (494)
T PHA02989 111 PIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF-GVNLFEKTSLYGLTPMNIYL 189 (494)
T ss_pred HHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHc-CCCccccccccCCChHHHHH
Confidence 88877765 5788888888888888 78888888888888754 577888888877 888887 5778888888887
Q ss_pred hcC----CHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHc------CCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhc
Q 006702 180 YKG----FADCIRLLLFLDAYRGRQDKEGCTPLHWAAIR------GNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDK 249 (634)
Q Consensus 180 ~~g----~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~------g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~ 249 (634)
..+ +.+++++|++.|++++.+|..+.||||.++.. +..+++++|+. | ++++.+|..|.||||+|+..
T Consensus 190 ~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~--advn~~d~~G~TpL~~Aa~~ 266 (494)
T PHA02989 190 RNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-Y--IKINKKDKKGFNPLLISAKV 266 (494)
T ss_pred hcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-C--CCCCCCCCCCCCHHHHHHHh
Confidence 654 77888888888887766655444444443322 12334443332 2 34444444444444444444
Q ss_pred CcHHHHHHHHHHH-HHhcccCCCCCCcccccccCcch
Q 006702 250 NHRQVAFFLGNAR-RLLDKRCDGNSPIGKISKLGLAP 285 (634)
Q Consensus 250 ~~~~i~~~L~~~~-~l~~~~~~~~~~~~~~~~~g~~~ 285 (634)
++.+++++|.+.+ .+...+..|.+|++.+...+...
T Consensus 267 ~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~ 303 (494)
T PHA02989 267 DNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNID 303 (494)
T ss_pred cCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 4444444443322 22233344444444444444433
No 25
>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]
Probab=99.98 E-value=3.4e-32 Score=257.50 Aligned_cols=165 Identities=29% Similarity=0.488 Sum_probs=116.9
Q ss_pred cccccccccccCCCCCCCCcchhhhhccCCcCccccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-----
Q 006702 376 SQLCATCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWDFFLFLVLEVSAMLVTGAVTVIRVFTDPVA----- 450 (634)
Q Consensus 376 ~~~C~~C~~~kP~Rs~HC~~C~~CV~rfDHHCpwv~ncIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~----- 450 (634)
..+|.+|..+||||+|||++|++||++|||||||+|||||..||||||+|+++.++++.+..++..+..+.....
T Consensus 102 ~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFFlFl~~ltlat~~~~i~~~~~w~~~le~~~~~t 181 (309)
T KOG1313|consen 102 DSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFFLFLFYLTLATSYAAIMCVYTWIDHLEPIEEIT 181 (309)
T ss_pred ccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 368999999999999999999999999999999999999999999999999999999887766654322211000
Q ss_pred --CCC------chhhh-hhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhh--hhhhhcCCCCCcc
Q 006702 451 --PSS------FGAWM-SYASTHHIGALSFLIADFSLFFGVAVLTAVQASQISRNITTNEMANAL--RYNYLRGAGGRFR 519 (634)
Q Consensus 451 --~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~n~TT~E~~~~~--r~~y~~~~~~~~~ 519 (634)
++. ..... .+.......+....++++.+.+.++.+..+|.++|.+|.|.+|..... |-+|+... .+
T Consensus 182 ay~~d~~h~~Pp~~i~r~~~~i~~t~~~~~~fls~~~lv~vg~l~~W~~vlI~~G~tsi~~~~~~~e~k~~~a~~---R~ 258 (309)
T KOG1313|consen 182 AYASDVAHVAPPPSILRVYKNITRTSIANLWFLSVRVLVAVGLLTAWHAVLISRGETSIEQLINIKERKRYLAHL---RS 258 (309)
T ss_pred cccCcccccCCChhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheeeehhhhhHHHHHHHHHhHhHHHhc---cC
Confidence 000 00001 011111111222344455566778889999999999999999976532 33333221 16
Q ss_pred CCCCHhHHhHHHHhcccCCccccc
Q 006702 520 NPYDHGCKRNCSDFLINGFNEDVE 543 (634)
Q Consensus 520 npyd~G~~~N~~~f~~~~~~~~~~ 543 (634)
||++.|+.+||+.|++-...+..|
T Consensus 259 ~~~n~g~k~nWr~fLg~~~~r~~w 282 (309)
T KOG1313|consen 259 NPTNFGGKANWRNFLGLFRGRHFW 282 (309)
T ss_pred CCcccchHHHHHHhhccccCCcee
Confidence 999999999999999766554333
No 26
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=7.9e-31 Score=301.63 Aligned_cols=214 Identities=25% Similarity=0.250 Sum_probs=119.7
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHH---------------------
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYII--------------------- 91 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll--------------------- 91 (634)
.+..+.||||.||+.|+.++|+.|++ .|++++..+..|.||||+|+..++.+++++|+
T Consensus 174 ~d~~G~TpLh~Aa~~G~~~iv~~LL~-~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~ 252 (682)
T PHA02876 174 KDIYCITPIHYAAERGNAKMVNLLLS-YGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNED 252 (682)
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCC
Confidence 34455666666666666666666665 55666555555555555555555554444333
Q ss_pred --------hcCCCCCCCCCCCCcHHHHHHHhCCH-HHHHHHHhcCCCCCccccCCChHHHHHHHhC-CHHHHHHHHHccC
Q 006702 92 --------EHGGDVNAADHTGQTALHWSAVRGAI-QVAELLLREGARVNAADMYGYQTTHVAAQYG-QTAFLYHIVSKWN 161 (634)
Q Consensus 92 --------~~gad~n~~~~~g~tpLh~A~~~g~~-~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g-~~~~v~~Ll~~~~ 161 (634)
+.|++++..+..|.||||+|+..|+. +++++|++.|++++.+|..|.||||+|+..| ..++++.|+.. |
T Consensus 253 ~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~-g 331 (682)
T PHA02876 253 LETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIML-G 331 (682)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHc-C
Confidence 23334444555555666666655554 3555555666666555555666666666555 35555555544 5
Q ss_pred CCCCCCCCCCChHHHHHHhc-CCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCC
Q 006702 162 ADPDVPDNDGRSPLHWAAYK-GFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGL 240 (634)
Q Consensus 162 ~~~~~~d~~g~t~Lh~A~~~-g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~ 240 (634)
++++..|..|.||||+|+.. +..+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++| ++++..+..|.
T Consensus 332 adin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~g--ad~~~~~~~g~ 409 (682)
T PHA02876 332 ADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYG--ADIEALSQKIG 409 (682)
T ss_pred CCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCccccCCCCC
Confidence 55555555555555555553 3445555555555555555555555555555555555555555555 34445555555
Q ss_pred CHHHHHHhcC
Q 006702 241 TPAQLASDKN 250 (634)
Q Consensus 241 Tpl~~A~~~~ 250 (634)
||||+|+..+
T Consensus 410 T~Lh~A~~~~ 419 (682)
T PHA02876 410 TALHFALCGT 419 (682)
T ss_pred chHHHHHHcC
Confidence 5555555433
No 27
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1e-30 Score=283.42 Aligned_cols=215 Identities=18% Similarity=0.213 Sum_probs=197.6
Q ss_pred ccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCC-CCCCCCCcHHHH
Q 006702 32 VDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVN-AADHTGQTALHW 110 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n-~~~~~g~tpLh~ 110 (634)
..+..+.+|||.|+..|+.++++.|++ .|++++..+..+.||||.|+..|+.+++++|++.|++++ ..+..|.||||+
T Consensus 30 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~ 108 (413)
T PHA02875 30 FEIYDGISPIKLAMKFRDSEAIKLLMK-HGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHL 108 (413)
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHH
Confidence 345578999999999999999999998 788999888999999999999999999999999998764 456689999999
Q ss_pred HHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 006702 111 SAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLL 190 (634)
Q Consensus 111 A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 190 (634)
|+..|+.+++++|+++|++++.++..|.||||.|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|
T Consensus 109 A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~TpL~~A~~~g~~eiv~~L 187 (413)
T PHA02875 109 ATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDH-KACLDIEDCCGCTPLIIAMAKGDIAICKML 187 (413)
T ss_pred HHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987 999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCCC-CcHHHHHHHcCCHHHHHHHHHcCCCCCcc-ccCCCCCCHHHHHHh
Q 006702 191 LFLDAYRGRQDKEG-CTPLHWAAIRGNLEACTVLVQAGKKEDLM-VTDNTGLTPAQLASD 248 (634)
Q Consensus 191 l~~ga~~~~~d~~g-~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~-~~d~~g~Tpl~~A~~ 248 (634)
++.|++++..+..| .||+|+|+..|+.+++++|+++|+++++. ..+.++.||++.+..
T Consensus 188 l~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~ 247 (413)
T PHA02875 188 LDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTILDMICN 247 (413)
T ss_pred HhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHHHHHHh
Confidence 99999999999887 48999999999999999999999655432 346778999998764
No 28
>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]
Probab=99.97 E-value=1.2e-31 Score=273.00 Aligned_cols=172 Identities=28% Similarity=0.426 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHhhhccCCCccccCCCCCCCCCCchhhhhhhccCcchhcccccccccccccccCCCCCCCCcchhhhhcc
Q 006702 324 FLATGGLVLFYRCSRKDPGYIRMNVHDPQNMKDDEPLLKIEMNNPALLAGNWSQLCATCKIVRPLRAKHCSTCDRCVEQF 403 (634)
Q Consensus 324 ~l~~~~l~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~rf 403 (634)
++.....+.+++....|||+.+.+.......+..++..... ..+.+++|.+|+.+||+|||||+.|||||+||
T Consensus 64 ~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~C~~C~~~KP~RS~HC~~Cn~CV~k~ 136 (309)
T COG5273 64 VILVLASFSYLLLLVSDPGYLGENITLSGYRETISRLLDDG-------KFGTENFCSTCNIYKPPRSHHCSICNRCVLKF 136 (309)
T ss_pred hhhhhHHHhhHHHhhcCCCccCccccccchhhhhhhhhhcC-------ccccceeccccccccCCCCccchhhcchhhcc
Confidence 34446678889999999999986644333322222222222 22347999999999999999999999999999
Q ss_pred CCcCccccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhccccchhhHH--HHHHHHHHHH
Q 006702 404 DHHCPWVSNCIGKKNKWDFFLFLVLEVSAMLVTGAVTVIRVFTDPVAPSSFGAWMSYASTHHIGALSF--LIADFSLFFG 481 (634)
Q Consensus 404 DHHCpwv~ncIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 481 (634)
||||||+|||||.+|||+|++|+++.....++......+........+.....+ ..+++. ..+.+.+++.
T Consensus 137 DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~li~~~~~~~~~~f~~ 208 (309)
T COG5273 137 DHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDTSLA--------ICFLIFGCSLLGVVFFII 208 (309)
T ss_pred CccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCChHHH--------HHHHHHhhhHHHHHHHHH
Confidence 999999999999999999999999987776666555554443332222222211 111111 1233344566
Q ss_pred HHHHHHHHHHHHhhcchhHHHHhhhhhhh
Q 006702 482 VAVLTAVQASQISRNITTNEMANALRYNY 510 (634)
Q Consensus 482 ~~~l~~~~~~~i~~n~TT~E~~~~~r~~y 510 (634)
+..++.++.+++..|.||+|.....|...
T Consensus 209 ~~~~~~~~~~~~~~~~t~~e~~~~~~~~~ 237 (309)
T COG5273 209 TTLLLLFLIYLILNNLTTIEFIQISRGGS 237 (309)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcccee
Confidence 67788899999999999999888766654
No 29
>PHA02798 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.4e-30 Score=288.01 Aligned_cols=219 Identities=18% Similarity=0.182 Sum_probs=167.3
Q ss_pred hhhHHHHHH--HcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHc-----CCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 006702 37 LRNDVYTAA--AYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALN-----NRTAAAQYIIEHGGDVNAADHTGQTALH 109 (634)
Q Consensus 37 ~~~~L~~Aa--~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~-----g~~~~v~~Ll~~gad~n~~~~~g~tpLh 109 (634)
+.+++..+. ..++.++++.|++ .|++++..|..|.||||.|+.+ ++.+++++|+++|+|+|.+|..|.||||
T Consensus 36 ~~~~~~~yl~~~~~~~~iv~~Ll~-~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh 114 (489)
T PHA02798 36 EYSIFQKYLQRDSPSTDIVKLFIN-LGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLY 114 (489)
T ss_pred cchHHHHHHhCCCCCHHHHHHHHH-CCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHH
Confidence 444444333 3447788888887 7888888888888888887754 5678888888888888888888888888
Q ss_pred HHHHhC---CHHHHHHHHhcCCCCCccccCCChHHHHHHHhCC---HHHHHHHHHccCCCCCCCC-CCCChHHHHHHhc-
Q 006702 110 WSAVRG---AIQVAELLLREGARVNAADMYGYQTTHVAAQYGQ---TAFLYHIVSKWNADPDVPD-NDGRSPLHWAAYK- 181 (634)
Q Consensus 110 ~A~~~g---~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~---~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh~A~~~- 181 (634)
+|+..+ +.+++++|+++|||++.+|..|.||||+|++.++ .++++.|+++ |++++.++ ..|.||||.++..
T Consensus 115 ~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~-gadin~~~~~~~~t~Lh~~~~~~ 193 (489)
T PHA02798 115 CLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEK-GVDINTHNNKEKYDTLHCYFKYN 193 (489)
T ss_pred HHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHh-CCCcccccCcCCCcHHHHHHHhc
Confidence 888765 6788888888888888888888888888888776 7888888876 78887774 4677888877653
Q ss_pred ---CCHHHHHHHhhcCCC---------------------------------------CCCCCCCCCcHHHHHHHcCCHHH
Q 006702 182 ---GFADCIRLLLFLDAY---------------------------------------RGRQDKEGCTPLHWAAIRGNLEA 219 (634)
Q Consensus 182 ---g~~~~v~~Ll~~ga~---------------------------------------~~~~d~~g~TpLh~A~~~g~~~i 219 (634)
++.+++++|++.|++ +|.+|..|.||||+|+..|+.++
T Consensus 194 ~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~ 273 (489)
T PHA02798 194 IDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKI 273 (489)
T ss_pred cccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHH
Confidence 356777777766654 45566778888888888888888
Q ss_pred HHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHH
Q 006702 220 CTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLG 259 (634)
Q Consensus 220 v~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~ 259 (634)
+++|+++| +|++.+|..|.|||++|++.++.++++.|.
T Consensus 274 v~~LL~~G--Adin~~d~~G~TpL~~A~~~~~~~iv~~lL 311 (489)
T PHA02798 274 FEYLLQLG--GDINIITELGNTCLFTAFENESKFIFNSIL 311 (489)
T ss_pred HHHHHHcC--CcccccCCCCCcHHHHHHHcCcHHHHHHHH
Confidence 88888888 567788888888888888888888887764
No 30
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=4e-31 Score=283.12 Aligned_cols=257 Identities=22% Similarity=0.312 Sum_probs=233.3
Q ss_pred ccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 006702 32 VDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWS 111 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A 111 (634)
..|+.+.++||.|++..-.+.++.|++ .|++.+-.+..+.+|+|+|+..|+.++++.|+++|+|+|..|..|.||||.|
T Consensus 83 a~D~~~n~~l~~a~~~~~~~~i~~Lls-~gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A 161 (929)
T KOG0510|consen 83 AKDSADNTPLHAAVEYNQGDKIQVLLS-YGADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLA 161 (929)
T ss_pred hhhcccCchhHHHhhcchHHHHHHHHh-cCCCCChhhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHH
Confidence 357778999999999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHcc----CCCCCCCCCCCChHHHHHHhcCCHHHH
Q 006702 112 AVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKW----NADPDVPDNDGRSPLHWAAYKGFADCI 187 (634)
Q Consensus 112 ~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~----~~~~~~~d~~g~t~Lh~A~~~g~~~~v 187 (634)
|..++.|..+.|++.|+|+...|..|..|+|.|+..|..+..+..+.+. +..+|..++.+.||||.|+..|+.+++
T Consensus 162 ~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~l 241 (929)
T KOG0510|consen 162 ARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEML 241 (929)
T ss_pred HhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHH
Confidence 9999999889999999999999999999999999999999999999833 577899999999999999999999999
Q ss_pred HHHhhcCCC---------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcH
Q 006702 188 RLLLFLDAY---------------RGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHR 252 (634)
Q Consensus 188 ~~Ll~~ga~---------------~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~ 252 (634)
+.+++.|+. ++..|++|.||||+|+++|+.+.+..|+..| ++++.+++++.||||.|+..|+.
T Consensus 242 k~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~G--a~I~~kn~d~~spLH~AA~yg~~ 319 (929)
T KOG0510|consen 242 KMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFG--ASINSKNKDEESPLHFAAIYGRI 319 (929)
T ss_pred HHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcC--CcccccCCCCCCchHHHHHcccH
Confidence 999987753 3567899999999999999999999999999 68899999999999999999999
Q ss_pred HHHHHHHH---HHHHhcccCCCCCCcccccccCcchhHHHHH
Q 006702 253 QVAFFLGN---ARRLLDKRCDGNSPIGKISKLGLAPALWCVI 291 (634)
Q Consensus 253 ~i~~~L~~---~~~l~~~~~~~~~~~~~~~~~g~~~l~~~~i 291 (634)
+.++-|.+ .+.+.+.+..+.+|++.+.+.|....+..++
T Consensus 320 ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl 361 (929)
T KOG0510|consen 320 NTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLL 361 (929)
T ss_pred HHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHH
Confidence 99988766 2345567778889998887777666555443
No 31
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.97 E-value=3.1e-30 Score=284.61 Aligned_cols=234 Identities=19% Similarity=0.219 Sum_probs=195.8
Q ss_pred HHHHHHHcCCHHHHHHHHhc---cCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCC
Q 006702 40 DVYTAAAYGDLEKLQRLVEC---EGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGA 116 (634)
Q Consensus 40 ~L~~Aa~~g~~~~v~~Ll~~---~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~ 116 (634)
.|+.+...++.+.+...++. .+...+.....+.||||+||..|+.++|++|+++|+++|.+|..|.||||+||..|+
T Consensus 3 ~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~ 82 (477)
T PHA02878 3 KLYKSMYTDNYETILKYIEYIDHTENYSTSASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPN 82 (477)
T ss_pred hHHHHHHhccHHHHHHHHHHHhhhhhhcCcccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCcc
Confidence 36677777776666666653 111223345568999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHH---------------------------------HHHHHHHccCCC
Q 006702 117 IQVAELLLREGARVNAADMYGYQTTHVAAQYGQTA---------------------------------FLYHIVSKWNAD 163 (634)
Q Consensus 117 ~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~---------------------------------~v~~Ll~~~~~~ 163 (634)
.++++.|++.+++... ..+.++++.|+..++.+ ++++|++. |++
T Consensus 83 ~~~v~~Ll~~~~~~~~--~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~-gad 159 (477)
T PHA02878 83 KLGMKEMIRSINKCSV--FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSY-GAD 159 (477)
T ss_pred HhHHHHHHHHHhcccc--ccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHc-CCC
Confidence 9999999998876655 56788999998876543 66667766 999
Q ss_pred CCCCCCC-CChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCH
Q 006702 164 PDVPDND-GRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTP 242 (634)
Q Consensus 164 ~~~~d~~-g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tp 242 (634)
++.+|.. |.||||+|+..|+.+++++|++.|++++.+|..|.||||.|+..|+.+++++|+++| ++++.+|..|.||
T Consensus 160 in~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g--a~in~~d~~g~Tp 237 (477)
T PHA02878 160 INMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENG--ASTDARDKCGNTP 237 (477)
T ss_pred CCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC--CCCCCCCCCCCCH
Confidence 9999999 999999999999999999999999999999999999999999999999999999999 6788999999999
Q ss_pred HHHHHhc-CcHHHHHHHHHHHHHhc-cc-CCCCCCcccc
Q 006702 243 AQLASDK-NHRQVAFFLGNARRLLD-KR-CDGNSPIGKI 278 (634)
Q Consensus 243 l~~A~~~-~~~~i~~~L~~~~~l~~-~~-~~~~~~~~~~ 278 (634)
||+|+.. ++.+++++|.+.+.-.. +. ..+.+|++.+
T Consensus 238 Lh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A 276 (477)
T PHA02878 238 LHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS 276 (477)
T ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH
Confidence 9999975 68999999876543222 22 2455666555
No 32
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=5.8e-30 Score=294.47 Aligned_cols=221 Identities=22% Similarity=0.249 Sum_probs=202.5
Q ss_pred hhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCC
Q 006702 37 LRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGA 116 (634)
Q Consensus 37 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~ 116 (634)
..++|+.|+..|+.++++.|++ .|++++.+|..|.||||+||..|+.++|++|+++|++++..+..|.||||.|+..|+
T Consensus 145 ~~~~l~~~i~~~~~~i~k~Ll~-~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~ 223 (682)
T PHA02876 145 YMKLIKERIQQDELLIAEMLLE-GGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKN 223 (682)
T ss_pred hhHHHHHHHHCCcHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCC
Confidence 4567889999999999999998 899999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHH-----------------------------hcCCCCCccccCCChHHHHHHHhCCH-HHHHHHHHccCCCCCC
Q 006702 117 IQVAELLL-----------------------------REGARVNAADMYGYQTTHVAAQYGQT-AFLYHIVSKWNADPDV 166 (634)
Q Consensus 117 ~~iv~~Ll-----------------------------~~gad~~~~d~~g~t~L~~Aa~~g~~-~~v~~Ll~~~~~~~~~ 166 (634)
.+++++|+ +.|++++..|..|.||||+|+..++. ++++.|++. |++++.
T Consensus 224 ~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~-gadin~ 302 (682)
T PHA02876 224 IDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLER-GADVNA 302 (682)
T ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHC-CCCCCC
Confidence 88776654 45667888889999999999999997 477777766 999999
Q ss_pred CCCCCChHHHHHHhcC-CHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCccccCCCCCCHHH
Q 006702 167 PDNDGRSPLHWAAYKG-FADCIRLLLFLDAYRGRQDKEGCTPLHWAAIR-GNLEACTVLVQAGKKEDLMVTDNTGLTPAQ 244 (634)
Q Consensus 167 ~d~~g~t~Lh~A~~~g-~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~-g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~ 244 (634)
+|.+|.||||+|+..| ..+++++|+..|++++.+|..|.||||+|+.. ++.++++.|++.| ++++.+|..|.||||
T Consensus 303 ~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~g--adin~~d~~G~TpLh 380 (682)
T PHA02876 303 KNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELG--ANVNARDYCDKTPIH 380 (682)
T ss_pred cCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcC--CCCccCCCCCCCHHH
Confidence 9999999999999999 58999999999999999999999999999985 5789999999999 678899999999999
Q ss_pred HHHhcCcHHHHHHHHHH
Q 006702 245 LASDKNHRQVAFFLGNA 261 (634)
Q Consensus 245 ~A~~~~~~~i~~~L~~~ 261 (634)
+|+..++.+++++|.+.
T Consensus 381 ~Aa~~~~~~iv~~Ll~~ 397 (682)
T PHA02876 381 YAAVRNNVVIINTLLDY 397 (682)
T ss_pred HHHHcCCHHHHHHHHHC
Confidence 99999999999998653
No 33
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.97 E-value=2.2e-30 Score=286.83 Aligned_cols=232 Identities=21% Similarity=0.202 Sum_probs=199.4
Q ss_pred HcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHc--CCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC------CH
Q 006702 46 AYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALN--NRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRG------AI 117 (634)
Q Consensus 46 ~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~--g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g------~~ 117 (634)
...+.++++.|++ .|+++|.. ..|.||||.++.. ++.++|++|+++|+|+|.++ .+.||||.|+..+ +.
T Consensus 12 ~~~~~~~v~~LL~-~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~ 88 (494)
T PHA02989 12 DTVDKNALEFLLR-TGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIK 88 (494)
T ss_pred CcCcHHHHHHHHH-cCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHH
Confidence 3588999999998 89999998 6789998776654 37899999999999999886 5799999998754 57
Q ss_pred HHHHHHHhcCCCCCccccCCChHHHHHHHh---CCHHHHHHHHHccCCCC-CCCCCCCChHHHHHHhc--CCHHHHHHHh
Q 006702 118 QVAELLLREGARVNAADMYGYQTTHVAAQY---GQTAFLYHIVSKWNADP-DVPDNDGRSPLHWAAYK--GFADCIRLLL 191 (634)
Q Consensus 118 ~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~---g~~~~v~~Ll~~~~~~~-~~~d~~g~t~Lh~A~~~--g~~~~v~~Ll 191 (634)
+++++|+++|||++.+|..|.||||.|+.. ++.+++++|+++ |+++ +.+|..|.||||+|+.. ++.+++++|+
T Consensus 89 ~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~-Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll 167 (494)
T PHA02989 89 KIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSK-GINVNDVKNSRGYNLLHMYLESFSVKKDVIKILL 167 (494)
T ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHC-CCCcccccCCCCCCHHHHHHHhccCCHHHHHHHH
Confidence 899999999999999999999999998765 678999999998 9999 89999999999998764 6889999999
Q ss_pred hcCCCCCC-CCCCCCcHHHHHHHcC----CHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcC------cHHHHHHHHH
Q 006702 192 FLDAYRGR-QDKEGCTPLHWAAIRG----NLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKN------HRQVAFFLGN 260 (634)
Q Consensus 192 ~~ga~~~~-~d~~g~TpLh~A~~~g----~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~------~~~i~~~L~~ 260 (634)
+.|++++. .+..|.||||+|+..+ +.+++++|+++| ++++.+|..|.||++.+...+ ..+++++|..
T Consensus 168 ~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~G--a~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~ 245 (494)
T PHA02989 168 SFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKG--VNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK 245 (494)
T ss_pred HcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCC--CCccccCCccccHHHHHHHhchhhcccchHHHHHHHh
Confidence 99999998 6889999999998764 899999999999 577888989999999877643 4577788777
Q ss_pred HHHHhcccCCCCCCcccccccCc
Q 006702 261 ARRLLDKRCDGNSPIGKISKLGL 283 (634)
Q Consensus 261 ~~~l~~~~~~~~~~~~~~~~~g~ 283 (634)
...+..++..|.+|++.+...+.
T Consensus 246 ~advn~~d~~G~TpL~~Aa~~~~ 268 (494)
T PHA02989 246 YIKINKKDKKGFNPLLISAKVDN 268 (494)
T ss_pred CCCCCCCCCCCCCHHHHHHHhcC
Confidence 66666677788888887655443
No 34
>PHA02798 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.5e-29 Score=279.85 Aligned_cols=230 Identities=20% Similarity=0.216 Sum_probs=189.3
Q ss_pred CHHHHHHHHhccCCCCcCCCCCCchHHHHHHH--cCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh-----CCHHHHH
Q 006702 49 DLEKLQRLVECEGCSVSEPDGLGYYALQWAAL--NNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVR-----GAIQVAE 121 (634)
Q Consensus 49 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~--~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~-----g~~~iv~ 121 (634)
+++.|+.|++ . .+++.. ..+.|+++.+.. .++.++|++|+++|+|+|.+|..|.||||.|+.. +..++++
T Consensus 17 ~~~~v~~ll~-~-~~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~ 93 (489)
T PHA02798 17 KLSTVKLLIK-S-CNPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVK 93 (489)
T ss_pred cHHHHHHHHh-c-CChhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHH
Confidence 5779999997 3 344444 446787765544 4489999999999999999999999999998864 6799999
Q ss_pred HHHhcCCCCCccccCCChHHHHHHHhC---CHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCC---HHHHHHHhhcCC
Q 006702 122 LLLREGARVNAADMYGYQTTHVAAQYG---QTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGF---ADCIRLLLFLDA 195 (634)
Q Consensus 122 ~Ll~~gad~~~~d~~g~t~L~~Aa~~g---~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~---~~~v~~Ll~~ga 195 (634)
+|+++|||++.+|..|.||||+|+..+ +.+++++|+++ |++++.+|.+|.||||+|+..++ .+++++|++.|+
T Consensus 94 ~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~ga 172 (489)
T PHA02798 94 ILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIEN-GADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGV 172 (489)
T ss_pred HHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCC
Confidence 999999999999999999999999976 68999999988 99999999999999999999988 899999999999
Q ss_pred CCCCCC-CCCCcHHHHHHHc----CCHHHHHHHHHcCCCC-------------------------------------Ccc
Q 006702 196 YRGRQD-KEGCTPLHWAAIR----GNLEACTVLVQAGKKE-------------------------------------DLM 233 (634)
Q Consensus 196 ~~~~~d-~~g~TpLh~A~~~----g~~~iv~~Ll~~g~~~-------------------------------------d~~ 233 (634)
+++.++ ..|.||||.++.. ++.+++++|+++|+++ |++
T Consensus 173 din~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN 252 (489)
T PHA02798 173 DINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDIN 252 (489)
T ss_pred CcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCC
Confidence 999885 5789999998764 4799999999988532 456
Q ss_pred ccCCCCCCHHHHHHhcCcHHHHHHHHHHHH-HhcccCCCCCCcccccccC
Q 006702 234 VTDNTGLTPAQLASDKNHRQVAFFLGNARR-LLDKRCDGNSPIGKISKLG 282 (634)
Q Consensus 234 ~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~-l~~~~~~~~~~~~~~~~~g 282 (634)
.+|..|.||||+|+..++.+++++|.+.+. +...+..|.+|+..+...+
T Consensus 253 ~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~ 302 (489)
T PHA02798 253 QVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENE 302 (489)
T ss_pred CcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcC
Confidence 688899999999999999999999865332 2223333444444433333
No 35
>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]
Probab=99.96 E-value=9e-30 Score=242.05 Aligned_cols=113 Identities=35% Similarity=0.561 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHH-HHHHHHHhhhccCCCccccCCCCCCCCCCchhhhhhhccCcchhcccccccccccccccCCCCCCCC
Q 006702 316 GLLAWSGVFLAT-GGLVLFYRCSRKDPGYIRMNVHDPQNMKDDEPLLKIEMNNPALLAGNWSQLCATCKIVRPLRAKHCS 394 (634)
Q Consensus 316 ~~~~w~~i~l~~-~~l~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~ 394 (634)
+..-|+..++++ ..++++..++.+|||.+........... -|... . ......-|.||+++||.|||||+
T Consensus 97 sl~~~il~~l~vivp~i~f~ltc~snpg~i~k~n~s~~~~~--ypYDy------~--if~k~~kCSTCki~KPARSKHCs 166 (341)
T KOG1312|consen 97 SLHYLILPYLLVIVPLIFFTLTCGSNPGIITKANESLFLHV--YPYDY------V--IFPKNVKCSTCKIRKPARSKHCS 166 (341)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhhhccceec--cCccc------e--eecCCCccccccCCCccccccch
Confidence 455566665554 3467778899999999975432111110 01100 0 00112679999999999999999
Q ss_pred cchhhhhccCCcCccccccccCCChHHHHHHHHHHHHHHHHHHH
Q 006702 395 TCDRCVEQFDHHCPWVSNCIGKKNKWDFFLFLVLEVSAMLVTGA 438 (634)
Q Consensus 395 ~C~~CV~rfDHHCpwv~ncIG~~N~r~F~~fl~~~~~~~~~~~~ 438 (634)
+|||||.||||||.|+|||||++|.|||++|+++...++++...
T Consensus 167 iCNrCV~rfDHHCiWiNNCIG~~N~ryF~lFLL~~i~l~~yaiv 210 (341)
T KOG1312|consen 167 ICNRCVHRFDHHCIWINNCIGAWNIRYFLLFLLTLISLATYAIV 210 (341)
T ss_pred HHHHHHHHhccceEeeecccccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998766655433
No 36
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96 E-value=3.2e-28 Score=238.04 Aligned_cols=176 Identities=16% Similarity=0.162 Sum_probs=124.8
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC--CHHHHHHHHhcCCCCCccc-cCCChHHHHHH
Q 006702 69 GLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRG--AIQVAELLLREGARVNAAD-MYGYQTTHVAA 145 (634)
Q Consensus 69 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g--~~~iv~~Ll~~gad~~~~d-~~g~t~L~~Aa 145 (634)
+.+.||||+|+..|+.++|+.|++. ++..|..|.||||+|+..+ +.+++++|+++|++++.++ ..|.||||+|+
T Consensus 19 ~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~ 95 (209)
T PHA02859 19 YRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYL 95 (209)
T ss_pred hccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHH
Confidence 4456777777777777777777764 4556666777777777643 6777777777777777765 36777777766
Q ss_pred Hh---CCHHHHHHHHHccCCCCCCCCCCCChHHHHHHh--cCCHHHHHHHhhcCCCCCCCCCCCCcHHHH-HHHcCCHHH
Q 006702 146 QY---GQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAY--KGFADCIRLLLFLDAYRGRQDKEGCTPLHW-AAIRGNLEA 219 (634)
Q Consensus 146 ~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~--~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~-A~~~g~~~i 219 (634)
.. ++.+++++|+++ |++++.+|..|.||||+|+. .++.+++++|++.|++++.+|..|.||||. |+..++.++
T Consensus 96 ~~~~~~~~eiv~~Ll~~-gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~i 174 (209)
T PHA02859 96 SFNKNVEPEILKILIDS-GSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKI 174 (209)
T ss_pred HhCccccHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHH
Confidence 43 356777777765 77777777777777777765 356777788887788777777778888874 455677778
Q ss_pred HHHHHHcCCCCCccccCCCCCCHHHHHHhcC
Q 006702 220 CTVLVQAGKKEDLMVTDNTGLTPAQLASDKN 250 (634)
Q Consensus 220 v~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~ 250 (634)
+++|+++| ++++.+|..|+||+++|+.++
T Consensus 175 v~~Ll~~G--adi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 175 FDFLTSLG--IDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred HHHHHHcC--CCCCCCCCCCCCHHHHHhhhh
Confidence 88888777 466677777888888776654
No 37
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=4.6e-29 Score=252.35 Aligned_cols=216 Identities=28% Similarity=0.354 Sum_probs=183.1
Q ss_pred HHHHHHcCCHHHHHHHHhccC-C---CCcCCCCCCchHHHHHHHcCCHHHHHHHHh-cCCCCCCCC--------CCCCcH
Q 006702 41 VYTAAAYGDLEKLQRLVECEG-C---SVSEPDGLGYYALQWAALNNRTAAAQYIIE-HGGDVNAAD--------HTGQTA 107 (634)
Q Consensus 41 L~~Aa~~g~~~~v~~Ll~~~~-~---~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~-~gad~n~~~--------~~g~tp 107 (634)
.+.|++.|.+..+..|+.... . ++-..+.+|.|||-+||++|+.++|++|++ .++++.... -.|-+|
T Consensus 8 ~~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~Iegapp 87 (615)
T KOG0508|consen 8 VINAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPP 87 (615)
T ss_pred HHHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCch
Confidence 347888899888888876321 1 122235678899999999999999999998 466655432 357789
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHH
Q 006702 108 LHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCI 187 (634)
Q Consensus 108 Lh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v 187 (634)
|-.|+..||+++|+.|+++||++|....-..|||-.|+.-|+.++++||+++ |+|++..|..|+|.||+||++|+.+++
T Consensus 88 LWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~-gad~~IanrhGhTcLmIa~ykGh~~I~ 166 (615)
T KOG0508|consen 88 LWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEH-GADPEIANRHGHTCLMIACYKGHVDIA 166 (615)
T ss_pred hhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHc-CCCCcccccCCCeeEEeeeccCchHHH
Confidence 8888899999999999999999998888888999999999999999999977 999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHH
Q 006702 188 RLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGN 260 (634)
Q Consensus 188 ~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~ 260 (634)
++|++.|+|+|.++..|+|+||.++..|+++++++|+++|+..+ +|..|.|||..|+..|+.+++++|.+
T Consensus 167 qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~---~d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 167 QYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID---VDGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred HHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceee---ecCCCCchHHHHhhhcchHHHHHHhc
Confidence 99999999999999999999999999999999999999986544 57779999999999999999998863
No 38
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96 E-value=4.5e-28 Score=237.01 Aligned_cols=177 Identities=15% Similarity=0.161 Sum_probs=161.5
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcC--CHHHHHHHHhcCCCCCCCCC-CCCcHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNN--RTAAAQYIIEHGGDVNAADH-TGQTALHW 110 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g--~~~~v~~Ll~~gad~n~~~~-~g~tpLh~ 110 (634)
.++..+||+.|++.|+++.|+.|++. ++..|..|.||||+|+.++ +.+++++|+++|+++|.++. .|.||||+
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~ 93 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHH 93 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHH
Confidence 45678999999999999999999972 5678899999999999865 89999999999999999974 89999999
Q ss_pred HHHh---CCHHHHHHHHhcCCCCCccccCCChHHHHHHH--hCCHHHHHHHHHccCCCCCCCCCCCChHHHH-HHhcCCH
Q 006702 111 SAVR---GAIQVAELLLREGARVNAADMYGYQTTHVAAQ--YGQTAFLYHIVSKWNADPDVPDNDGRSPLHW-AAYKGFA 184 (634)
Q Consensus 111 A~~~---g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~--~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~-A~~~g~~ 184 (634)
|+.. ++.+++++|+++|++++.+|..|.||||.|+. .++.+++++|++. |++++.+|.+|.||||. |+..++.
T Consensus 94 a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~-gadin~~d~~g~t~Lh~~a~~~~~~ 172 (209)
T PHA02859 94 YLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDS-GVSFLNKDFDNNNILYSYILFHSDK 172 (209)
T ss_pred HHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHc-CCCcccccCCCCcHHHHHHHhcCCH
Confidence 8764 47999999999999999999999999999986 4689999999987 99999999999999995 5678899
Q ss_pred HHHHHHhhcCCCCCCCCCCCCcHHHHHHHcC
Q 006702 185 DCIRLLLFLDAYRGRQDKEGCTPLHWAAIRG 215 (634)
Q Consensus 185 ~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g 215 (634)
+++++|++.|++++.+|..|.|||++|+.++
T Consensus 173 ~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 173 KIFDFLTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 9999999999999999999999999999764
No 39
>PHA02917 ankyrin-like protein; Provisional
Probab=99.96 E-value=1.2e-27 Score=269.46 Aligned_cols=227 Identities=12% Similarity=0.099 Sum_probs=188.9
Q ss_pred ccccchhhHHHHHHHc---CCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHH----HHHHHHhcCCCCCCCCCCC
Q 006702 32 VDEESLRNDVYTAAAY---GDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTA----AAQYIIEHGGDVNAADHTG 104 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~----~v~~Ll~~gad~n~~~~~g 104 (634)
..++.+.+|||.|+.. |+.++++.||+ .|++++..+..|.||||+|+..|+.+ +++.|++.+..+|..+.
T Consensus 27 ~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~-~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~-- 103 (661)
T PHA02917 27 TRNQFKNNALHAYLFNEHCNNVEVVKLLLD-SGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDF-- 103 (661)
T ss_pred ccCCCCCcHHHHHHHhhhcCcHHHHHHHHH-CCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCc--
Confidence 3477889999997555 88999999998 89999999999999999999999854 56788887554555432
Q ss_pred CcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHH--HhCCHHHHHHHHHccCCCCCCCCC---CC--------
Q 006702 105 QTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAA--QYGQTAFLYHIVSKWNADPDVPDN---DG-------- 171 (634)
Q Consensus 105 ~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa--~~g~~~~v~~Ll~~~~~~~~~~d~---~g-------- 171 (634)
.+++++|+..|+.++|++|+++|+|++.+|..|.||||.|+ ..|+.+++++|++. |++++.+|. .|
T Consensus 104 ~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~-Ga~vn~~d~~~~~g~~~~~~~~ 182 (661)
T PHA02917 104 NIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIEN-GCSVLYEDEDDEYGYAYDDYQP 182 (661)
T ss_pred chHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHc-CCCccccccccccccccccccc
Confidence 37788999999999999999999999999999999999654 57899999999988 999986653 33
Q ss_pred ---ChHHHHHHh-----------cCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCH--HHHHHHHHcCCCCC--cc
Q 006702 172 ---RSPLHWAAY-----------KGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNL--EACTVLVQAGKKED--LM 233 (634)
Q Consensus 172 ---~t~Lh~A~~-----------~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~--~iv~~Ll~~g~~~d--~~ 233 (634)
.||||+|+. .++.+++++|++.|++++.+|.+|.||||+|+.+|+. ++|++|++ |++.+ ..
T Consensus 183 ~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~ 261 (661)
T PHA02917 183 RNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSY 261 (661)
T ss_pred cccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCccccccc
Confidence 599999986 4688999999999999999999999999999999985 79999975 74322 12
Q ss_pred ccCCCCCCHHHHHHhc-------C--cHHHHHHHHHHHH
Q 006702 234 VTDNTGLTPAQLASDK-------N--HRQVAFFLGNARR 263 (634)
Q Consensus 234 ~~d~~g~Tpl~~A~~~-------~--~~~i~~~L~~~~~ 263 (634)
..|..|.+|+++|+.- + +.+++++|.+.+.
T Consensus 262 ~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga 300 (661)
T PHA02917 262 IDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGK 300 (661)
T ss_pred ccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCC
Confidence 4667788999999842 1 6688998876653
No 40
>PHA02917 ankyrin-like protein; Provisional
Probab=99.96 E-value=1.5e-27 Score=268.81 Aligned_cols=206 Identities=17% Similarity=0.145 Sum_probs=178.7
Q ss_pred HHHHHHHHhccCCCCcCCCCCCchHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHH----HHHH
Q 006702 50 LEKLQRLVECEGCSVSEPDGLGYYALQWAALN---NRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQ----VAEL 122 (634)
Q Consensus 50 ~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~---g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~----iv~~ 122 (634)
++.++.|+. ++..++..|..|.||||+|+.. |+.++|++|++.|++++.++..|.||||+|+..|+.+ +++.
T Consensus 12 ~~~~~~l~~-~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~ 90 (661)
T PHA02917 12 LDELKQMLR-DRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMA 90 (661)
T ss_pred HHHHHHHHh-ccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHH
Confidence 578899997 7888888899999999998655 8899999999999999999999999999999999854 5678
Q ss_pred HHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHH--hcCCHHHHHHHhhcCCCCCCC
Q 006702 123 LLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAA--YKGFADCIRLLLFLDAYRGRQ 200 (634)
Q Consensus 123 Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~--~~g~~~~v~~Ll~~ga~~~~~ 200 (634)
|++.+...+..+. .++++.|+..++.+++++|+++ |++++.+|.+|+||||.|+ ..|+.+++++|+++|++++.+
T Consensus 91 Ll~~~~~~n~~~~--~~~~~~a~~~~~~e~vk~Ll~~-Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~ 167 (661)
T PHA02917 91 LLEATGYSNINDF--NIFSYMKSKNVDVDLIKVLVEH-GFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYE 167 (661)
T ss_pred HHhccCCCCCCCc--chHHHHHhhcCCHHHHHHHHHc-CCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccc
Confidence 8887654555443 3678889999999999999988 9999999999999999654 578999999999999999866
Q ss_pred CC---CC-----------CcHHHHHHH-----------cCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcH--H
Q 006702 201 DK---EG-----------CTPLHWAAI-----------RGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHR--Q 253 (634)
Q Consensus 201 d~---~g-----------~TpLh~A~~-----------~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~--~ 253 (634)
|. .| .||||+|+. .++.++|++|+++| +|++.+|..|.||||+|+..++. +
T Consensus 168 d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~G--advn~~d~~G~TpLh~A~~~g~~~~e 245 (661)
T PHA02917 168 DEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHG--IKPSSIDKNYCTALQYYIKSSHIDID 245 (661)
T ss_pred ccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCC--CCcccCCCCCCcHHHHHHHcCCCcHH
Confidence 53 34 599999986 45899999999999 68899999999999999999985 7
Q ss_pred HHHHHHHH
Q 006702 254 VAFFLGNA 261 (634)
Q Consensus 254 i~~~L~~~ 261 (634)
++++|.++
T Consensus 246 ivk~Li~g 253 (661)
T PHA02917 246 IVKLLMKG 253 (661)
T ss_pred HHHHHHhC
Confidence 99998653
No 41
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.95 E-value=1.7e-28 Score=248.25 Aligned_cols=192 Identities=23% Similarity=0.287 Sum_probs=179.2
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCC--------CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEP--------DGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTG 104 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~--------d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g 104 (634)
.+..+.+||..||++|+.++|++|++..++++... .-+|.+||-.|+..||+++||.|+++|+++|......
T Consensus 38 ~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TN 117 (615)
T KOG0508|consen 38 EVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTN 117 (615)
T ss_pred cccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccC
Confidence 45567799999999999999999999766665433 4568899999999999999999999999999999999
Q ss_pred CcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCH
Q 006702 105 QTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFA 184 (634)
Q Consensus 105 ~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 184 (634)
.|||..||.-|+.++||+|+++|||++..|..|.|.||+|+..|+.+++++|++. |+|+|.++..|+|+||.|+..|+.
T Consensus 118 StPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~-gADvn~ks~kGNTALH~caEsG~v 196 (615)
T KOG0508|consen 118 STPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQ-GADVNAKSYKGNTALHDCAESGSV 196 (615)
T ss_pred CccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHh-CCCcchhcccCchHHHhhhhcccH
Confidence 9999999999999999999999999999999999999999999999999999998 999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 006702 185 DCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQA 226 (634)
Q Consensus 185 ~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 226 (634)
+++++|+.+|+.++ +|..|.|||..|+..|..++|++|++.
T Consensus 197 divq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~~ 237 (615)
T KOG0508|consen 197 DIVQLLLKHGAKID-VDGHGMTPLLLAAVTGHTDIVERLLQC 237 (615)
T ss_pred HHHHHHHhCCceee-ecCCCCchHHHHhhhcchHHHHHHhcC
Confidence 99999999999876 467799999999999999999999974
No 42
>PHA02795 ankyrin-like protein; Provisional
Probab=99.95 E-value=1.1e-26 Score=244.48 Aligned_cols=203 Identities=11% Similarity=0.037 Sum_probs=179.3
Q ss_pred CCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCC------CCCCCCCcHHHHHHH--hCCHHH
Q 006702 48 GDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVN------AADHTGQTALHWSAV--RGAIQV 119 (634)
Q Consensus 48 g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n------~~~~~g~tpLh~A~~--~g~~~i 119 (634)
.-.+++-.++-++|.++|..+..| +|+..+..|++++|+++|+++| .++..++|+||.|+. .|+.++
T Consensus 59 ~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~ei 133 (437)
T PHA02795 59 DPVDVLYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDI 133 (437)
T ss_pred CHHHHHHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHH
Confidence 445555444444899999887777 8999999999999999999999 788889999999999 899999
Q ss_pred HHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCC-CC-----CCCCChHHHHHHhcCCHHHHHHHhhc
Q 006702 120 AELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPD-VP-----DNDGRSPLHWAAYKGFADCIRLLLFL 193 (634)
Q Consensus 120 v~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~-~~-----d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 193 (634)
|++|+++|||++.. .+.||+|.|+..++.+++++|+++ |++.. .. +..+.|++|.|+..+..+++++|+++
T Consensus 134 V~~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~-Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~ 210 (437)
T PHA02795 134 VDFMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNC-GIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPY 210 (437)
T ss_pred HHHHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhc-CCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhC
Confidence 99999999999885 458999999999999999999998 76432 22 23478999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcC--------cHHHHHHHHH
Q 006702 194 DAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKN--------HRQVAFFLGN 260 (634)
Q Consensus 194 ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~--------~~~i~~~L~~ 260 (634)
|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..| +.+++++|.+
T Consensus 211 GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~G--AdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~ 283 (437)
T PHA02795 211 IEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENG--ANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLR 283 (437)
T ss_pred cCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHh
Confidence 9999999999999999999999999999999999 678899999999999999988 4689998754
No 43
>PHA02795 ankyrin-like protein; Provisional
Probab=99.95 E-value=2e-26 Score=242.42 Aligned_cols=183 Identities=17% Similarity=0.147 Sum_probs=168.7
Q ss_pred HHHHcCCHHHHHHHHhccCCCCc------CCCCCCchHHHHHHH--cCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q 006702 43 TAAAYGDLEKLQRLVECEGCSVS------EPDGLGYYALQWAAL--NNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVR 114 (634)
Q Consensus 43 ~Aa~~g~~~~v~~Ll~~~~~~~~------~~d~~g~t~Lh~Aa~--~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~ 114 (634)
.|+..+..++++.|+. +|++++ .++..++|+||.|+. .|+.++|++|+++|||++.. ++.||||+|+..
T Consensus 83 ~~~~~~~k~~~~~l~s-~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~ 159 (437)
T PHA02795 83 LFAYITYKDIISALVS-KNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICK 159 (437)
T ss_pred HHhhcchHHHHHHHHh-cccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHc
Confidence 8999999999999998 899988 788889999999999 89999999999999999985 458999999999
Q ss_pred CCHHHHHHHHhcCCCCCccc------cCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHH
Q 006702 115 GAIQVAELLLREGARVNAAD------MYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIR 188 (634)
Q Consensus 115 g~~~iv~~Ll~~gad~~~~d------~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~ 188 (634)
|+.+++++|+++|++..... ..+.+++|.|+..++.+++++|++. |++++.+|..|.||||+|+..|+.++++
T Consensus 160 ~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~-GADIN~kD~~G~TpLh~Aa~~g~~eiVe 238 (437)
T PHA02795 160 KESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPY-IEDINQLDAGGRTLLYRAIYAGYIDLVS 238 (437)
T ss_pred CcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhC-cCCcCcCCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999998543222 3478899999999999999999988 9999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCCCcHHHHHHHcCC--------HHHHHHHHHcCCC
Q 006702 189 LLLFLDAYRGRQDKEGCTPLHWAAIRGN--------LEACTVLVQAGKK 229 (634)
Q Consensus 189 ~Ll~~ga~~~~~d~~g~TpLh~A~~~g~--------~~iv~~Ll~~g~~ 229 (634)
+|++.|++++.+|..|.||||+|+..|+ .+++++|+++|++
T Consensus 239 lLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gad 287 (437)
T PHA02795 239 WLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLS 287 (437)
T ss_pred HHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCC
Confidence 9999999999999999999999999984 6999999999953
No 44
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.94 E-value=8.7e-28 Score=273.27 Aligned_cols=225 Identities=29% Similarity=0.377 Sum_probs=157.4
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAV 113 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~ 113 (634)
++.+.++++.|+++|..+.++.++. .|.+++..+..|.||||.|+..++.++|+.++++|++++.++..|+||+|.|+.
T Consensus 371 ~~k~~~pl~la~~~g~~~~v~Lll~-~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~ 449 (1143)
T KOG4177|consen 371 EEKGFTPLHLAVKSGRVSVVELLLE-AGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAK 449 (1143)
T ss_pred cccCCcchhhhcccCchhHHHhhhh-ccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhh
Confidence 4445555555555555555555554 445555555555555555555555555555555555555555555555555555
Q ss_pred hC-CHHHHHHHHhcCCCCCccccCCChHHHHHHHhC---------------------------------CHHHHHHHHHc
Q 006702 114 RG-AIQVAELLLREGARVNAADMYGYQTTHVAAQYG---------------------------------QTAFLYHIVSK 159 (634)
Q Consensus 114 ~g-~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g---------------------------------~~~~v~~Ll~~ 159 (634)
.| ..+++..+++.|++++..-..|.||||+|++.| ....++.+++.
T Consensus 450 ~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ 529 (1143)
T KOG4177|consen 450 KGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEH 529 (1143)
T ss_pred cccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhc
Confidence 55 444445555555555555555555555555554 44445545544
Q ss_pred cCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCC
Q 006702 160 WNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTG 239 (634)
Q Consensus 160 ~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g 239 (634)
|++++.++..|.||||.|+..|+.++|++|+++|++++.+|+.|+||||.||..|+.+++++|+++| +++|..|.+|
T Consensus 530 -ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~G--A~vna~d~~g 606 (1143)
T KOG4177|consen 530 -GANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHG--ASVNAADLDG 606 (1143)
T ss_pred -CCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcC--CCCCcccccC
Confidence 7778888899999999999999999999999999999999999999999999999999999999999 6788999999
Q ss_pred CCHHHHHHhcCcHHHHHHHHHHH
Q 006702 240 LTPAQLASDKNHRQVAFFLGNAR 262 (634)
Q Consensus 240 ~Tpl~~A~~~~~~~i~~~L~~~~ 262 (634)
.|||++|+..|+.+++++|....
T Consensus 607 ~TpL~iA~~lg~~~~~k~l~~~~ 629 (1143)
T KOG4177|consen 607 FTPLHIAVRLGYLSVVKLLKVVT 629 (1143)
T ss_pred cchhHHHHHhcccchhhHHHhcc
Confidence 99999999999999999986544
No 45
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.94 E-value=1.1e-27 Score=272.36 Aligned_cols=253 Identities=30% Similarity=0.437 Sum_probs=218.0
Q ss_pred ccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 006702 32 VDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWS 111 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A 111 (634)
..+..+.++||.|++.++.++...+++ .+..-...++.|.||+|.|+..|+.++++++++.|+++|.+++.|.||||.|
T Consensus 336 aar~~g~t~lHlaa~~~~~~~~~~l~~-~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~a 414 (1143)
T KOG4177|consen 336 AARTAGYTPLHLAAKEGQVEVAGALLE-HGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVA 414 (1143)
T ss_pred ccCcCCcccccHhhhhhhHHHHHHhhc-cccccCcccccCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeeh
Confidence 456778999999999999996666666 6777777889999999999999999999999999999999999999999999
Q ss_pred HHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhC-CHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 006702 112 AVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYG-QTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLL 190 (634)
Q Consensus 112 ~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g-~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 190 (634)
+..++.++|+.++++|++++..+..|+|++|.|+..| ..++...++ +.+.+++..-..|.||||.|+..|+.++++.|
T Consensus 415 a~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~-~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~ll 493 (1143)
T KOG4177|consen 415 AHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLL-QYGADPNAVSKQGFTPLHLAAQEGHTEVVQLL 493 (1143)
T ss_pred hhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHh-hcCCCcchhccccCcchhhhhccCCchHHHHh
Confidence 9999999999999999999999999999999999999 555555444 45999999999999999999888887766655
Q ss_pred h---------------------------------hcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCC
Q 006702 191 L---------------------------------FLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDN 237 (634)
Q Consensus 191 l---------------------------------~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~ 237 (634)
+ ++|++++.++..|.||||.|+..|+.++|++|+++| +|++.+++
T Consensus 494 le~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~g--Adv~ak~~ 571 (1143)
T KOG4177|consen 494 LEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHG--ADVNAKDK 571 (1143)
T ss_pred hhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCC--ccccccCC
Confidence 5 445666777889999999999999999999999999 68889999
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHHHH-HhcccCCCCCCcccccccCcchhHH
Q 006702 238 TGLTPAQLASDKNHRQVAFFLGNARR-LLDKRCDGNSPIGKISKLGLAPALW 288 (634)
Q Consensus 238 ~g~Tpl~~A~~~~~~~i~~~L~~~~~-l~~~~~~~~~~~~~~~~~g~~~l~~ 288 (634)
.|+||||.|+..|+.+++++|.+.+. ....+.++.+|+..+...|.....-
T Consensus 572 ~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k 623 (1143)
T KOG4177|consen 572 LGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVK 623 (1143)
T ss_pred CCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhh
Confidence 99999999999999999999876553 3445566777777666666544433
No 46
>PHA02730 ankyrin-like protein; Provisional
Probab=99.94 E-value=4.5e-26 Score=250.62 Aligned_cols=212 Identities=17% Similarity=0.151 Sum_probs=182.7
Q ss_pred HHcCCHHHHHHHHhccCCCCcCCCCCCchHHHH--HHHcCCHHHHHHHHh------------------------------
Q 006702 45 AAYGDLEKLQRLVECEGCSVSEPDGLGYYALQW--AALNNRTAAAQYIIE------------------------------ 92 (634)
Q Consensus 45 a~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~--Aa~~g~~~~v~~Ll~------------------------------ 92 (634)
...++.|+++.|++ +|+++|.+|..|.||||+ |...|+.|+|++|++
T Consensus 210 ~~~n~~eiv~lLIs-~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (672)
T PHA02730 210 SESLSKDVIKCLID-NNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRV 288 (672)
T ss_pred hhccCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhc
Confidence 56789999999998 899999999999999995 556677999999999
Q ss_pred --cCCCCCC--------------------CCCCCCc---------------------HHHHHHHhC---CHHHHHHHHhc
Q 006702 93 --HGGDVNA--------------------ADHTGQT---------------------ALHWSAVRG---AIQVAELLLRE 126 (634)
Q Consensus 93 --~gad~n~--------------------~~~~g~t---------------------pLh~A~~~g---~~~iv~~Ll~~ 126 (634)
+|+|... .+..|.+ .||.-...+ +.+++++|+++
T Consensus 289 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~ 368 (672)
T PHA02730 289 TPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDN 368 (672)
T ss_pred ccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHC
Confidence 7888755 4556654 677666655 68999999999
Q ss_pred CCCCCccccCCChHHHHHHHhCC----HHHHHHHHHccCC--CCCCCCCCCChHHHH---HHhcC---------CHHHHH
Q 006702 127 GARVNAADMYGYQTTHVAAQYGQ----TAFLYHIVSKWNA--DPDVPDNDGRSPLHW---AAYKG---------FADCIR 188 (634)
Q Consensus 127 gad~~~~d~~g~t~L~~Aa~~g~----~~~v~~Ll~~~~~--~~~~~d~~g~t~Lh~---A~~~g---------~~~~v~ 188 (634)
||+++.. ..|.||||+|+..++ .+++++|+++ |+ +++.+|..|.||||. |...+ ..++++
T Consensus 369 GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~-Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk 446 (672)
T PHA02730 369 GATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVEN-NGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFD 446 (672)
T ss_pred CCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHc-CCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHH
Confidence 9999986 799999999998875 8999999998 65 799999999999984 33332 235799
Q ss_pred HHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCC-CCCCHHHHHHhc--CcHHHHHHHHHH
Q 006702 189 LLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDN-TGLTPAQLASDK--NHRQVAFFLGNA 261 (634)
Q Consensus 189 ~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~-~g~Tpl~~A~~~--~~~~i~~~L~~~ 261 (634)
+|+++|++++.+|..|.||||+|+..++.+++++|+++| ++++.+|. .|.||+|.|+.. ++.+++++|.+.
T Consensus 447 ~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~G--AdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ 520 (672)
T PHA02730 447 ILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYG--ASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSY 520 (672)
T ss_pred HHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCC--CCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHc
Confidence 999999999999999999999999999999999999999 67888996 599999999874 789999998654
No 47
>PHA02730 ankyrin-like protein; Provisional
Probab=99.94 E-value=3.5e-26 Score=251.47 Aligned_cols=192 Identities=12% Similarity=0.114 Sum_probs=160.7
Q ss_pred ccccchhhHHHHHHHcC---CHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcC--CHHHHHHHHhcCCC--CCCCCCCC
Q 006702 32 VDEESLRNDVYTAAAYG---DLEKLQRLVECEGCSVSEPDGLGYYALQWAALNN--RTAAAQYIIEHGGD--VNAADHTG 104 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g---~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g--~~~~v~~Ll~~gad--~n~~~~~g 104 (634)
..++.++|+||.|+..| +.++++.||+ +|++++.+|..|.||||+|+..+ +.++|++|++.|++ ++..+..+
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs-~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~ 114 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLS-RGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIN 114 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHh-CCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccC
Confidence 35667999999999997 5999999998 89999999999999999999977 79999999999664 47777778
Q ss_pred CcHHHHHHH--hCCHHHHHHHHh-cCCCCCcccc-----CCChHHHHHHHhCCHHHHHHHHHccCCCCC-------CCCC
Q 006702 105 QTALHWSAV--RGAIQVAELLLR-EGARVNAADM-----YGYQTTHVAAQYGQTAFLYHIVSKWNADPD-------VPDN 169 (634)
Q Consensus 105 ~tpLh~A~~--~g~~~iv~~Ll~-~gad~~~~d~-----~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~-------~~d~ 169 (634)
.+||+.++. +++.++|++|++ .++|++.... .|.+|+++|+..++.+++++|++. |++++ ..|.
T Consensus 115 d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~-g~~v~g~~~~~~~~~~ 193 (672)
T PHA02730 115 DFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKS-ECYSTGYVFRSCMYDS 193 (672)
T ss_pred CchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHc-CCcccccccccccccC
Confidence 899998888 889999999996 6788876633 789999999999999999999988 88884 2444
Q ss_pred CCChHHHH-H------HhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHH--HHHcCCHHHHHHHHH
Q 006702 170 DGRSPLHW-A------AYKGFADCIRLLLFLDAYRGRQDKEGCTPLHW--AAIRGNLEACTVLVQ 225 (634)
Q Consensus 170 ~g~t~Lh~-A------~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~--A~~~g~~~iv~~Ll~ 225 (634)
...+|+.+ + ..++..+++++|+++|+++|.+|..|.||||+ |...|+.|+|++|++
T Consensus 194 ~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 194 DRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIK 258 (672)
T ss_pred CccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHh
Confidence 55544433 2 45677899999999999999999999999985 555567899999998
No 48
>PHA02792 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.5e-25 Score=243.93 Aligned_cols=241 Identities=11% Similarity=0.020 Sum_probs=199.3
Q ss_pred cchhhHHH-HHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHH-cCCHHHHHHHHhcCCCCC--------------
Q 006702 35 ESLRNDVY-TAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAAL-NNRTAAAQYIIEHGGDVN-------------- 98 (634)
Q Consensus 35 ~~~~~~L~-~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~-~g~~~~v~~Ll~~gad~n-------------- 98 (634)
..+.++++ .|...|++|+|+.|++ +|+++|.++..+.||||+|+. .++.|++++|+++|||++
T Consensus 69 ~~~~~~~~~~~s~n~~lElvk~LI~-~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~ 147 (631)
T PHA02792 69 INDFDIFEYLCSDNIDIELLKLLIS-KGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQI 147 (631)
T ss_pred cCCccHHHHHHHhcccHHHHHHHHH-cCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhc
Confidence 33445664 5778899999999999 899999999999999999966 699999999999998732
Q ss_pred ----------------------CCCCCCCcHHHHHHHhC-------CHHHHHHHHhcCCCCCccccCCChHHHHHHHhC-
Q 006702 99 ----------------------AADHTGQTALHWSAVRG-------AIQVAELLLREGARVNAADMYGYQTTHVAAQYG- 148 (634)
Q Consensus 99 ----------------------~~~~~g~tpLh~A~~~g-------~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g- 148 (634)
..|..|.||||+|+..+ +.++++.|+++|++++.+|..|.||||+|+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~ 227 (631)
T PHA02792 148 TRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCD 227 (631)
T ss_pred ccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHccc
Confidence 34556999999999999 899999999999999999999999999999987
Q ss_pred -CHHHHHHHHHcc-------------------------------------------------------------------
Q 006702 149 -QTAFLYHIVSKW------------------------------------------------------------------- 160 (634)
Q Consensus 149 -~~~~v~~Ll~~~------------------------------------------------------------------- 160 (634)
..++++.|++..
T Consensus 228 i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q 307 (631)
T PHA02792 228 IKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQ 307 (631)
T ss_pred chHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHH
Confidence 667777666531
Q ss_pred -----------------------CCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCC--CcHHHHHHHcC
Q 006702 161 -----------------------NADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEG--CTPLHWAAIRG 215 (634)
Q Consensus 161 -----------------------~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g--~TpLh~A~~~g 215 (634)
|++.. ......+++.|+..|+.+++++|+++|++++.+|..| .||||+|+...
T Consensus 308 ~~l~~Yl~~~~v~ieiIK~LId~Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~ 385 (631)
T PHA02792 308 DLLSEYVSYHTVYINVIKCMIDEGATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIH 385 (631)
T ss_pred HHHHHHHhcCCccHHHHHHHHHCCCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhc
Confidence 11100 0123456889999999999999999999999998875 69999988776
Q ss_pred CH---HHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHH-HhcccCCCCCCcccccc
Q 006702 216 NL---EACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARR-LLDKRCDGNSPIGKISK 280 (634)
Q Consensus 216 ~~---~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~-l~~~~~~~~~~~~~~~~ 280 (634)
.. +++++|+++| +|++.+|..|.||||+|+..++.+++++|.+.+. +..++..+.++++.+..
T Consensus 386 ~~~v~~IlklLIs~G--ADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 386 ESDVLSILKLCKPYI--DDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred cHhHHHHHHHHHhcC--CccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 54 4688899999 6788999999999999999999999999977653 44567788899887654
No 49
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.93 E-value=1.6e-24 Score=251.58 Aligned_cols=223 Identities=22% Similarity=0.193 Sum_probs=184.5
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhc-cCCCCcCCCCCCchHHH-HHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVEC-EGCSVSEPDGLGYYALQ-WAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWS 111 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~g~t~Lh-~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A 111 (634)
-...+..++.||+.|+.+.++.+++. .+.++|..|..|.|||| .|+.+++.+++++|+++|+ .+..|.||||.|
T Consensus 14 ~~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A 89 (743)
T TIGR00870 14 LSDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAI 89 (743)
T ss_pred CCHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHH
Confidence 34678999999999999999999983 27899999999999999 8899999999999999987 567899999999
Q ss_pred HHh---CCHHHHHHHHhcCCC------C----CccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCC----------
Q 006702 112 AVR---GAIQVAELLLREGAR------V----NAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPD---------- 168 (634)
Q Consensus 112 ~~~---g~~~iv~~Ll~~gad------~----~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d---------- 168 (634)
+.. +...+++.+.+.+.+ + ...+..|.||||+|+..|+.++++.|+++ |++++.++
T Consensus 90 ~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~-GAdv~~~~~~~~~~~~~~ 168 (743)
T TIGR00870 90 SLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLER-GASVPARACGDFFVKSQG 168 (743)
T ss_pred HhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhC-CCCCCcCcCCchhhcCCC
Confidence 872 222344444444432 1 11235799999999999999999999998 99998653
Q ss_pred ----CCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcC-----C----HHHHHHHHHcCCCC-Cc--
Q 006702 169 ----NDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRG-----N----LEACTVLVQAGKKE-DL-- 232 (634)
Q Consensus 169 ----~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g-----~----~~iv~~Ll~~g~~~-d~-- 232 (634)
..|.||||.|+..|+.+++++|++.|+|++.+|..|+||||+|+..+ + ..+.+++++.+... +.
T Consensus 169 ~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~e 248 (743)
T TIGR00870 169 VDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKE 248 (743)
T ss_pred CCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHh
Confidence 35899999999999999999999999999999999999999999987 2 33556666665332 22
Q ss_pred --cccCCCCCCHHHHHHhcCcHHHHHHHHHH
Q 006702 233 --MVTDNTGLTPAQLASDKNHRQVAFFLGNA 261 (634)
Q Consensus 233 --~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~ 261 (634)
+..|.+|.|||++|+..|+.+++++|.+.
T Consensus 249 l~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~ 279 (743)
T TIGR00870 249 LEVILNHQGLTPLKLAAKEGRIVLFRLKLAI 279 (743)
T ss_pred hhhhcCCCCCCchhhhhhcCCccHHHHHHHH
Confidence 56799999999999999999999998764
No 50
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.93 E-value=1.3e-25 Score=206.69 Aligned_cols=233 Identities=23% Similarity=0.279 Sum_probs=202.3
Q ss_pred hhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCC
Q 006702 37 LRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGA 116 (634)
Q Consensus 37 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~ 116 (634)
++..+-.|...|+-+..+..+.-..--+..+|.+|+.+++.|+-.++.+.++.+|.+|+..|..+..+.+|+.+++..-+
T Consensus 62 ge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~ 141 (296)
T KOG0502|consen 62 GESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLH 141 (296)
T ss_pred CCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHH
Confidence 44445667788888877777663444456678889999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCC
Q 006702 117 IQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAY 196 (634)
Q Consensus 117 ~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~ 196 (634)
++.+..|.++ .+|..|+.|.|||..|+..|+.+++++||+. |++++...+...++|.+|+..|+.++|++|+.++.|
T Consensus 142 L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~-GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vd 218 (296)
T KOG0502|consen 142 LDVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNS-GADPDALGKYRESALSLATRGGYTDIVELLLTREVD 218 (296)
T ss_pred HHHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHc-CCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCC
Confidence 8888877765 5788999999999999999999999999987 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHHHhcccCCCCCC
Q 006702 197 RGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARRLLDKRCDGNSP 274 (634)
Q Consensus 197 ~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~l~~~~~~~~~~ 274 (634)
+|..|.+|-|||.+|+..++.++|+.|+..| +|++..+..|.+++++|+..|.+.+-..+++....+-.+....+|
T Consensus 219 VNvyDwNGgTpLlyAvrgnhvkcve~Ll~sG--Ad~t~e~dsGy~~mdlAValGyr~Vqqvie~h~lkl~Q~~~~~~~ 294 (296)
T KOG0502|consen 219 VNVYDWNGGTPLLYAVRGNHVKCVESLLNSG--ADVTQEDDSGYWIMDLAVALGYRIVQQVIEKHALKLCQDSEKRTP 294 (296)
T ss_pred cceeccCCCceeeeeecCChHHHHHHHHhcC--CCcccccccCCcHHHHHHHhhhHHHHHHHHHHHHHHhhcccCCCC
Confidence 9999999999999999999999999999999 688899999999999999999995555555544433333333333
No 51
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.92 E-value=6.4e-26 Score=208.78 Aligned_cols=202 Identities=23% Similarity=0.330 Sum_probs=188.3
Q ss_pred chhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q 006702 36 SLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRG 115 (634)
Q Consensus 36 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g 115 (634)
.+.+.++.|+-.|+.+.+..+|. ++...|+.+-.+.+|+.+++...+.+.+..|.++ .+|..|+.|.|||+||+..|
T Consensus 95 ~g~~~~~v~ap~~s~~k~sttlt-N~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G 171 (296)
T KOG0502|consen 95 EGWSALLVAAPCGSVDKVSTTLT-NGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKG 171 (296)
T ss_pred hhhhhhhhcCCCCCcceeeeeec-ccccCCccccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhcC
Confidence 38999999999999999999998 7889999999999999999999999988877764 68899999999999999999
Q ss_pred CHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCC
Q 006702 116 AIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDA 195 (634)
Q Consensus 116 ~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga 195 (634)
++++|++|++.|||++...+...++|.+|...|..++++.||.+ +.|+|..|-+|.|||.+|++.++.++++.|++.|+
T Consensus 172 ~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r-~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGA 250 (296)
T KOG0502|consen 172 HIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTR-EVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGA 250 (296)
T ss_pred chHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhc-CCCcceeccCCCceeeeeecCChHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999988 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHH
Q 006702 196 YRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQ 244 (634)
Q Consensus 196 ~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~ 244 (634)
+++..|..|.+++..|+..|+. +|+..+++. ++.+.+|+.-+||+|
T Consensus 251 d~t~e~dsGy~~mdlAValGyr-~Vqqvie~h--~lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 251 DVTQEDDSGYWIMDLAVALGYR-IVQQVIEKH--ALKLCQDSEKRTPLH 296 (296)
T ss_pred CcccccccCCcHHHHHHHhhhH-HHHHHHHHH--HHHHhhcccCCCCCC
Confidence 9999999999999999999998 899988876 566677777777764
No 52
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.92 E-value=3.2e-24 Score=250.49 Aligned_cols=179 Identities=19% Similarity=0.193 Sum_probs=164.5
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHH
Q 006702 67 PDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQ 146 (634)
Q Consensus 67 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~ 146 (634)
.+..+.++||.||..|+.++++.|++.|+|+|..|..|.||||+|+..|+.+++++|+++|+|++.+|.+|.||||.|+.
T Consensus 521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~ 600 (823)
T PLN03192 521 DDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAIS 600 (823)
T ss_pred CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHH
Confidence 34456799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 006702 147 YGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQA 226 (634)
Q Consensus 147 ~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 226 (634)
.|+.++++.|+.. +...+ ...+.++||+|+..|+.+++++|++.|++++.+|.+|.||||+|+..|+.+++++|+++
T Consensus 601 ~g~~~iv~~L~~~-~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 677 (823)
T PLN03192 601 AKHHKIFRILYHF-ASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMN 677 (823)
T ss_pred hCCHHHHHHHHhc-CcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHc
Confidence 9999999999965 44433 34577999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCC-CCHHHHHHhcC
Q 006702 227 GKKEDLMVTDNTG-LTPAQLASDKN 250 (634)
Q Consensus 227 g~~~d~~~~d~~g-~Tpl~~A~~~~ 250 (634)
| ++++..|..| .||++++....
T Consensus 678 G--Adv~~~~~~g~~t~~~l~~~~~ 700 (823)
T PLN03192 678 G--ADVDKANTDDDFSPTELRELLQ 700 (823)
T ss_pred C--CCCCCCCCCCCCCHHHHHHHHH
Confidence 9 5778889888 89998885543
No 53
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.92 E-value=1.3e-24 Score=231.87 Aligned_cols=245 Identities=20% Similarity=0.222 Sum_probs=213.9
Q ss_pred CCCcchhhhhcccc------------ccCCCCCCCCCCCCCCcccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCC
Q 006702 1 MSSEIEVVEEVGQS------------SQNHHNHDQSSPSNGVVVDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPD 68 (634)
Q Consensus 1 ~~~~~~~~e~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d 68 (634)
|++++++++..... +.-........++...+.++-.+.|.||.|+.+|+.++++.|++ ..+.++..|
T Consensus 1 mgk~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle-~ea~ldl~d 79 (854)
T KOG0507|consen 1 MGKKQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLD-YEALLDLCD 79 (854)
T ss_pred CchhhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhc-chhhhhhhh
Confidence 66666666654332 22223344455566667788899999999999999999999998 777888888
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhC
Q 006702 69 GLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYG 148 (634)
Q Consensus 69 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g 148 (634)
..|.+|||+|+..|+.++++.|+.++..+|..+..|.||||.|+.+|+.+++.+|+++|+|+..+|..+.|+|.+|++.|
T Consensus 80 ~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfg 159 (854)
T KOG0507|consen 80 TKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFG 159 (854)
T ss_pred ccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhh
Confidence 99999999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHccCCC--------CCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 006702 149 QTAFLYHIVSKWNAD--------PDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEAC 220 (634)
Q Consensus 149 ~~~~v~~Ll~~~~~~--------~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv 220 (634)
..+++..|+++ ..+ -..++..+.+|||.|+++|+.++++.|++.|.++|.....| |+||.|+..|..++|
T Consensus 160 r~~Vvq~ll~~-~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evv 237 (854)
T KOG0507|consen 160 RAEVVQMLLQK-KFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVV 237 (854)
T ss_pred hhHHHHHHhhh-ccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhh
Confidence 99999999876 222 12345567899999999999999999999999999988887 999999999999999
Q ss_pred HHHHHcCCCCCccccCCCCCCHHHHHHhcC
Q 006702 221 TVLVQAGKKEDLMVTDNTGLTPAQLASDKN 250 (634)
Q Consensus 221 ~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~ 250 (634)
+.|++.| ++...+|..|+|+|++-.+..
T Consensus 238 r~ll~~g--in~h~~n~~~qtaldil~d~~ 265 (854)
T KOG0507|consen 238 RFLLEIG--INTHIKNQHGQTALDIIIDLQ 265 (854)
T ss_pred hHHHhhc--cccccccccchHHHHHHHhcc
Confidence 9999999 678899999999999987654
No 54
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.91 E-value=8.9e-24 Score=246.77 Aligned_cols=178 Identities=18% Similarity=0.241 Sum_probs=166.2
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSA 112 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~ 112 (634)
.+....++|+.||..|+.+.++.|++ .|+++|..|..|.||||+||..|+.+++++|+++|+++|.+|..|.||||+|+
T Consensus 521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~-~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~ 599 (823)
T PLN03192 521 DDPNMASNLLTVASTGNAALLEELLK-AKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAI 599 (823)
T ss_pred CCccchhHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHH
Confidence 34456789999999999999999998 89999999999999999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhh
Q 006702 113 VRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLF 192 (634)
Q Consensus 113 ~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 192 (634)
..|+.+++++|++.++..+. ..|.++||.|+..|+.++++.|++. |++++.+|.+|.||||+|+..|+.+++++|++
T Consensus 600 ~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~-Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 676 (823)
T PLN03192 600 SAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQ-GLNVDSEDHQGATALQVAMAEDHVDMVRLLIM 676 (823)
T ss_pred HhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 99999999999998876543 4577999999999999999999987 99999999999999999999999999999999
Q ss_pred cCCCCCCCCCCC-CcHHHHHHHc
Q 006702 193 LDAYRGRQDKEG-CTPLHWAAIR 214 (634)
Q Consensus 193 ~ga~~~~~d~~g-~TpLh~A~~~ 214 (634)
.|++++..|..| .||+.++...
T Consensus 677 ~GAdv~~~~~~g~~t~~~l~~~~ 699 (823)
T PLN03192 677 NGADVDKANTDDDFSPTELRELL 699 (823)
T ss_pred cCCCCCCCCCCCCCCHHHHHHHH
Confidence 999999999988 9999877543
No 55
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.91 E-value=2.8e-24 Score=222.47 Aligned_cols=214 Identities=29% Similarity=0.414 Sum_probs=185.1
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHH
Q 006702 40 DVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQV 119 (634)
Q Consensus 40 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~i 119 (634)
.+..|+..|+.+.++.||. .++.++..+.+|.|+||.|+...+.+||++|+++|++||..|..|+||||.|+..|+..+
T Consensus 43 ~~l~A~~~~d~~ev~~ll~-~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i 121 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLN-RGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNI 121 (527)
T ss_pred HHHhccccccHHHHHHHhc-cCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHH
Confidence 4678899999999999998 778899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCccccCCChHHHHHHHh-------------C-CH------------HHHHHHHHccCCCCCCCCCCCCh
Q 006702 120 AELLLREGARVNAADMYGYQTTHVAAQY-------------G-QT------------AFLYHIVSKWNADPDVPDNDGRS 173 (634)
Q Consensus 120 v~~Ll~~gad~~~~d~~g~t~L~~Aa~~-------------g-~~------------~~v~~Ll~~~~~~~~~~d~~g~t 173 (634)
+++|+++||++...|..|..|+..+... | .. +-+...+. .|...+..+..|.|
T Consensus 122 ~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~-~G~~~d~~~~rG~T 200 (527)
T KOG0505|consen 122 VEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLN-AGAELDARHARGAT 200 (527)
T ss_pred HHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHh-ccccccccccccch
Confidence 9999999999988887777665443211 1 11 11222233 48888888888999
Q ss_pred HHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHH
Q 006702 174 PLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQ 253 (634)
Q Consensus 174 ~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~ 253 (634)
+||.|+.+|+.++.++|++.|.+++.+|.+|+||||.|+..|..+++++|+++| ++.+.+...|.||+++|.+.-- .
T Consensus 201 ~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~g--a~~d~~t~~g~~p~dv~dee~~-~ 277 (527)
T KOG0505|consen 201 ALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHG--ADMDAKTKMGETPLDVADEEEL-Y 277 (527)
T ss_pred HHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhh--cccchhhhcCCCCccchhhhhH-H
Confidence 999999999999999999999999999999999999999999999999999999 5777899999999999976543 3
Q ss_pred HHHHH
Q 006702 254 VAFFL 258 (634)
Q Consensus 254 i~~~L 258 (634)
..++.
T Consensus 278 l~eLe 282 (527)
T KOG0505|consen 278 LLELE 282 (527)
T ss_pred HHHHH
Confidence 33343
No 56
>PHA02792 ankyrin-like protein; Provisional
Probab=99.91 E-value=4.7e-23 Score=224.49 Aligned_cols=247 Identities=10% Similarity=0.001 Sum_probs=189.6
Q ss_pred ccchhhHHHHHHHcCCHHH-HHHHHhccCCCCcCCCCCCchHHHH-HHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEK-LQRLVECEGCSVSEPDGLGYYALQW-AALNNRTAAAQYIIEHGGDVNAADHTGQTALHWS 111 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~-v~~Ll~~~~~~~~~~d~~g~t~Lh~-Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A 111 (634)
..++.|||+.-..+.+..+ ++.++. -+..++..+-+|.+++|+ |+.+|+.|+|++|+++|||+|.++..+.||+|+|
T Consensus 34 ~~~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya 112 (631)
T PHA02792 34 EYDGETPLKAYVTKKNNNIKNDVVIL-LLSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYA 112 (631)
T ss_pred ccCCCccHHHHHhhhhhhHHHHHHHH-HHhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEe
Confidence 4455699998876666332 223333 445677888888899987 5568899999999999999999999999999999
Q ss_pred HH-hCCHHHHHHHHhcCCCCC------------------------------------ccccCCChHHHHHHHhC------
Q 006702 112 AV-RGAIQVAELLLREGARVN------------------------------------AADMYGYQTTHVAAQYG------ 148 (634)
Q Consensus 112 ~~-~g~~~iv~~Ll~~gad~~------------------------------------~~d~~g~t~L~~Aa~~g------ 148 (634)
+. .++.+++++|+++|||++ ..|..|.||||+|+..+
T Consensus 113 ~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~ 192 (631)
T PHA02792 113 TTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYA 192 (631)
T ss_pred ecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCccccc
Confidence 66 699999999999998743 23566999999999999
Q ss_pred -CHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcC--CHHHHHHHh----------------------------------
Q 006702 149 -QTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKG--FADCIRLLL---------------------------------- 191 (634)
Q Consensus 149 -~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g--~~~~v~~Ll---------------------------------- 191 (634)
+.++++.|+++ |++++.+|..|.||||+|+.+. +.+++++|+
T Consensus 193 ~~~~v~k~Li~~-g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~ 271 (631)
T PHA02792 193 TSLDVINYLISH-EKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVD 271 (631)
T ss_pred CCHHHHHHHHhC-CCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHH
Confidence 89999999998 9999999999999999998887 445555444
Q ss_pred ---------------------------------------------------------hcCCCCCCCCCCCCcHHHHHHHc
Q 006702 192 ---------------------------------------------------------FLDAYRGRQDKEGCTPLHWAAIR 214 (634)
Q Consensus 192 ---------------------------------------------------------~~ga~~~~~d~~g~TpLh~A~~~ 214 (634)
+.|++.. ...+..+++.|+..
T Consensus 272 ~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~--r~~~~n~~~~Aa~~ 349 (631)
T PHA02792 272 KLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLY--RFKHINKYFQKFDN 349 (631)
T ss_pred HHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccc--cCCcchHHHHHHHc
Confidence 3333322 11245678899999
Q ss_pred CCHHHHHHHHHcCCCCCccccCCCC--CCHHHHHHhcCcHH---HHHHHHHHH-HHhcccCCCCCCcccccccCcchh
Q 006702 215 GNLEACTVLVQAGKKEDLMVTDNTG--LTPAQLASDKNHRQ---VAFFLGNAR-RLLDKRCDGNSPIGKISKLGLAPA 286 (634)
Q Consensus 215 g~~~iv~~Ll~~g~~~d~~~~d~~g--~Tpl~~A~~~~~~~---i~~~L~~~~-~l~~~~~~~~~~~~~~~~~g~~~l 286 (634)
|+.++|++|+++| +|++.+|..| .||||.|......+ ++++|.+.+ .+..++..+.+|++.+...+...+
T Consensus 350 gn~eIVelLIs~G--ADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~ei 425 (631)
T PHA02792 350 RDPKVVEYILKNG--NVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSL 425 (631)
T ss_pred CCHHHHHHHHHcC--CchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHH
Confidence 9999999999999 5677888775 69999988776654 456554433 556677778888877765544333
No 57
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.90 E-value=3.3e-23 Score=221.17 Aligned_cols=222 Identities=25% Similarity=0.337 Sum_probs=199.5
Q ss_pred hhhHHHHHHHcCCHHHHHHHHhccC------------CCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC
Q 006702 37 LRNDVYTAAAYGDLEKLQRLVECEG------------CSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTG 104 (634)
Q Consensus 37 ~~~~L~~Aa~~g~~~~v~~Ll~~~~------------~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g 104 (634)
..+-|..|++.||++.+..||+..+ ...+..|..|.|+||.|+.+|+.+++++|+++.+-++..|..|
T Consensus 3 k~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg 82 (854)
T KOG0507|consen 3 KKQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKG 82 (854)
T ss_pred hhhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccC
Confidence 3466889999999999999998432 2356678899999999999999999999999999999999999
Q ss_pred CcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCH
Q 006702 105 QTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFA 184 (634)
Q Consensus 105 ~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 184 (634)
.+|||+|+..|+.++|++|+.++..+++.+..|.||||.|++.|+.+++.+|+.+ ++++-.+|+++.|+|-+|++-|..
T Consensus 83 ~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~-~adp~i~nns~~t~ldlA~qfgr~ 161 (854)
T KOG0507|consen 83 ILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKK-NADPFIRNNSKETVLDLASRFGRA 161 (854)
T ss_pred cceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhc-CCCccccCcccccHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999999999999988 999999999999999999999999
Q ss_pred HHHHHHhhcCCCC--------CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHH
Q 006702 185 DCIRLLLFLDAYR--------GRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAF 256 (634)
Q Consensus 185 ~~v~~Ll~~ga~~--------~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~ 256 (634)
++++.|+....++ ..++-.+.+|||.|+++|+.++++.|+++| .++|...+.| |+||-|+..|..+++.
T Consensus 162 ~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag--~din~~t~~g-talheaalcgk~evvr 238 (854)
T KOG0507|consen 162 EVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAG--FDINYTTEDG-TALHEAALCGKAEVVR 238 (854)
T ss_pred HHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcC--CCcccccccc-hhhhhHhhcCcchhhh
Confidence 9999998763322 234557789999999999999999999999 6777776666 9999999999999999
Q ss_pred HHHHHH
Q 006702 257 FLGNAR 262 (634)
Q Consensus 257 ~L~~~~ 262 (634)
+|.+.+
T Consensus 239 ~ll~~g 244 (854)
T KOG0507|consen 239 FLLEIG 244 (854)
T ss_pred HHHhhc
Confidence 986543
No 58
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.88 E-value=5e-22 Score=187.13 Aligned_cols=146 Identities=18% Similarity=0.130 Sum_probs=109.6
Q ss_pred cCCCCcCCCCCCchHHHHHHHcCCH----HHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHH---HHHHHhcCCCCCc
Q 006702 60 EGCSVSEPDGLGYYALQWAALNNRT----AAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQV---AELLLREGARVNA 132 (634)
Q Consensus 60 ~~~~~~~~d~~g~t~Lh~Aa~~g~~----~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~i---v~~Ll~~gad~~~ 132 (634)
++++++..+..+.++||.||..|+. +++++|++.|++++.+|..|+||||+|+..|+.+. +++|+++|++++.
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~ 88 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA 88 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence 4566667777777888888888877 55566777788888778888888888888776543 6788888888877
Q ss_pred cc-cCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCC
Q 006702 133 AD-MYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGC 205 (634)
Q Consensus 133 ~d-~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~ 205 (634)
++ ..|.||||+|+..++.+++++|+.+.+++++.+|..|.||||+|+..++.+++++|++.|++++.++..|.
T Consensus 89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~ 162 (166)
T PHA02743 89 RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL 162 (166)
T ss_pred CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence 76 46777777777777777777777544777777777777777777777777777777777777777766653
No 59
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.87 E-value=7e-22 Score=194.81 Aligned_cols=162 Identities=29% Similarity=0.408 Sum_probs=146.9
Q ss_pred CCCCCCCCCcHHHHHHHhCCHHHHHHHHhcC-CCCCccccCCChHHHHHHHh-----CCHHHHHHHHHccCCCCCCCC-C
Q 006702 97 VNAADHTGQTALHWSAVRGAIQVAELLLREG-ARVNAADMYGYQTTHVAAQY-----GQTAFLYHIVSKWNADPDVPD-N 169 (634)
Q Consensus 97 ~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~g-ad~~~~d~~g~t~L~~Aa~~-----g~~~~v~~Ll~~~~~~~~~~d-~ 169 (634)
+|..|.+|+|+||+|+.++++++|+.||+.| +|++..|..|+||+++|+.. .+..+|..|... .++|.+. .
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m--gnVNaKAsQ 338 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKM--GDVNAKASQ 338 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhc--cCcchhhhh
Confidence 7889999999999999999999999999998 68999999999999999864 355788888865 5677664 5
Q ss_pred CCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhc
Q 006702 170 DGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDK 249 (634)
Q Consensus 170 ~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~ 249 (634)
.|+|+|++|+..|+.++|+.||..|+|+|.+|.+|.|+|+.|+..|+.||+++||.. ..+|+..+|.+|-|+|.+|.+.
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~-p~cd~sLtD~DgSTAl~IAlea 417 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAV-PSCDISLTDVDGSTALSIALEA 417 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhcc-CcccceeecCCCchhhhhHHhc
Confidence 699999999999999999999999999999999999999999999999999999987 3489999999999999999999
Q ss_pred CcHHHHHHHHHH
Q 006702 250 NHRQVAFFLGNA 261 (634)
Q Consensus 250 ~~~~i~~~L~~~ 261 (634)
||.||..+|-..
T Consensus 418 gh~eIa~mlYa~ 429 (452)
T KOG0514|consen 418 GHREIAVMLYAH 429 (452)
T ss_pred CchHHHHHHHHH
Confidence 999999887443
No 60
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.87 E-value=1.9e-21 Score=225.83 Aligned_cols=216 Identities=22% Similarity=0.173 Sum_probs=172.4
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhc--CCCCCCCCCCCCcHHH-HHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHH
Q 006702 69 GLGYYALQWAALNNRTAAAQYIIEH--GGDVNAADHTGQTALH-WSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAA 145 (634)
Q Consensus 69 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~--gad~n~~~~~g~tpLh-~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa 145 (634)
..+...++.|+..|+.+.++.+++. +.++|..|..|+|||| .|+.+++.+++++|+++|+ ++..|.||||.|+
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~ 90 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAIS 90 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHH
Confidence 3467899999999999999999998 8999999999999999 8999999999999999998 6788999999999
Q ss_pred HhC--CH-HHHHHHHHccCCC------C----CCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCC-----------
Q 006702 146 QYG--QT-AFLYHIVSKWNAD------P----DVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQD----------- 201 (634)
Q Consensus 146 ~~g--~~-~~v~~Ll~~~~~~------~----~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d----------- 201 (634)
..+ .. .++..+... +.+ . ...+..|.||||+|+.+|+.+++++|++.|++++.++
T Consensus 91 ~~~~~~v~~ll~~l~~~-~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~ 169 (743)
T TIGR00870 91 LEYVDAVEAILLHLLAA-FRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGV 169 (743)
T ss_pred hccHHHHHHHHHHHhhc-ccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCC
Confidence 832 22 334444433 211 1 1223569999999999999999999999999998653
Q ss_pred ---CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcC-----c----HHHHHHHHHHHHH-----
Q 006702 202 ---KEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKN-----H----RQVAFFLGNARRL----- 264 (634)
Q Consensus 202 ---~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~-----~----~~i~~~L~~~~~l----- 264 (634)
..|.||||.|+..|+.+++++|+++| +|++.+|..|.||||+|+..+ + ..+.+++......
T Consensus 170 ~~~~~g~tpL~~Aa~~~~~~iv~lLl~~g--adin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~ 247 (743)
T TIGR00870 170 DSFYHGESPLNAAACLGSPSIVALLSEDP--ADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSK 247 (743)
T ss_pred CcccccccHHHHHHHhCCHHHHHHHhcCC--cchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChH
Confidence 35899999999999999999999999 588899999999999999886 2 2233444332211
Q ss_pred ---hcccCCCCCCcccccccCcchhHHHHH
Q 006702 265 ---LDKRCDGNSPIGKISKLGLAPALWCVI 291 (634)
Q Consensus 265 ---~~~~~~~~~~~~~~~~~g~~~l~~~~i 291 (634)
...+.++.+|++.+.+.|...+.-.++
T Consensus 248 el~~i~N~~g~TPL~~A~~~g~~~l~~lLL 277 (743)
T TIGR00870 248 ELEVILNHQGLTPLKLAAKEGRIVLFRLKL 277 (743)
T ss_pred hhhhhcCCCCCCchhhhhhcCCccHHHHHH
Confidence 234667889998888888777665444
No 61
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.86 E-value=3e-21 Score=181.82 Aligned_cols=145 Identities=22% Similarity=0.193 Sum_probs=131.5
Q ss_pred cCCCCCCCCCCCCcHHHHHHHhCCH----HHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHH---HHHHHHccCCCCC
Q 006702 93 HGGDVNAADHTGQTALHWSAVRGAI----QVAELLLREGARVNAADMYGYQTTHVAAQYGQTAF---LYHIVSKWNADPD 165 (634)
Q Consensus 93 ~gad~n~~~~~g~tpLh~A~~~g~~----~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~---v~~Ll~~~~~~~~ 165 (634)
+|++++..+..+.++||.||+.|+. +++++|++.|++++.+|..|+||||+|+..|+.+. +++|++. |++++
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~-Gadin 87 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNM-GADIN 87 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHc-CCCCC
Confidence 5778888888999999999999998 67778889999999999999999999999988654 7788877 99999
Q ss_pred CCC-CCCChHHHHHHhcCCHHHHHHHhh-cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCC
Q 006702 166 VPD-NDGRSPLHWAAYKGFADCIRLLLF-LDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGL 240 (634)
Q Consensus 166 ~~d-~~g~t~Lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~ 240 (634)
.+| ..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++| ++++.++..|.
T Consensus 88 ~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~g--a~~~~~~~~~~ 162 (166)
T PHA02743 88 ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANG--AVCDDPLSIGL 162 (166)
T ss_pred CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCcccCCc
Confidence 998 589999999999999999999995 79999999999999999999999999999999999 56777777764
No 62
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.84 E-value=4.7e-21 Score=189.04 Aligned_cols=161 Identities=26% Similarity=0.364 Sum_probs=144.7
Q ss_pred CcCCCCCCchHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCcHHHHHHHh-----CCHHHHHHHHhcCCCCCccc-cC
Q 006702 64 VSEPDGLGYYALQWAALNNRTAAAQYIIEHG-GDVNAADHTGQTALHWSAVR-----GAIQVAELLLREGARVNAAD-MY 136 (634)
Q Consensus 64 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g-ad~n~~~~~g~tpLh~A~~~-----g~~~iv~~Ll~~gad~~~~d-~~ 136 (634)
+|.-|.+|+|+||||+.++++++|+.||+.| +++|.+|..|+||+|+|+.. .+.++|..|.+.| |+|++- ..
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~ 339 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH 339 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence 3567889999999999999999999999987 58999999999999998864 4678899999876 677664 57
Q ss_pred CChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhc-CCCCCCCCCCCCcHHHHHHHcC
Q 006702 137 GYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFL-DAYRGRQDKEGCTPLHWAAIRG 215 (634)
Q Consensus 137 g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~TpLh~A~~~g 215 (634)
|+|+|++|+..|+.++++.||.. |+|+|.+|.+|.|+|+.|+..|+.+++++||.. ++|....|.+|.|+|.+|-..|
T Consensus 340 gQTALMLAVSHGr~d~vk~LLac-gAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleag 418 (452)
T KOG0514|consen 340 GQTALMLAVSHGRVDMVKALLAC-GADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAG 418 (452)
T ss_pred cchhhhhhhhcCcHHHHHHHHHc-cCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcC
Confidence 99999999999999999999987 999999999999999999999999999999875 6888999999999999999999
Q ss_pred CHHHHHHHHHc
Q 006702 216 NLEACTVLVQA 226 (634)
Q Consensus 216 ~~~iv~~Ll~~ 226 (634)
+.||.-+|..+
T Consensus 419 h~eIa~mlYa~ 429 (452)
T KOG0514|consen 419 HREIAVMLYAH 429 (452)
T ss_pred chHHHHHHHHH
Confidence 99999888765
No 63
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.84 E-value=3.9e-20 Score=187.88 Aligned_cols=155 Identities=19% Similarity=0.108 Sum_probs=130.3
Q ss_pred cCCCCCCch-HHHHHHHcCCHHHHHHHHhcCCCCCCCC----CCCCcHHHHHHHhCCHHHHHHHHhcCCCCCcc-ccCCC
Q 006702 65 SEPDGLGYY-ALQWAALNNRTAAAQYIIEHGGDVNAAD----HTGQTALHWSAVRGAIQVAELLLREGARVNAA-DMYGY 138 (634)
Q Consensus 65 ~~~d~~g~t-~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~----~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~-d~~g~ 138 (634)
..+|..|.| +||.|+..|+.+++++|+++|+|+|.++ ..|.||||+|+..|+.+++++|+++|||++.+ +..|.
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~ 105 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKI 105 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCC
Confidence 345666665 6677777789999999999999999874 58999999999999999999999999999986 46799
Q ss_pred hHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 006702 139 QTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLE 218 (634)
Q Consensus 139 t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~ 218 (634)
||||.|+..++.+++++|+.. |++++.+|..|.||||+|+..++.+++..+. |. ..+..+.+|++++ ++.|
T Consensus 106 TpLh~Aa~~~~~eivklLL~~-GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~---~n~e 176 (300)
T PHA02884 106 TPLYISVLHGCLKCLEILLSY-GADINIQTNDMVTPIELALMICNNFLAFMIC--DN---EISNFYKHPKKIL---INFD 176 (300)
T ss_pred CHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CC---cccccccChhhhh---ccHH
Confidence 999999999999999999987 9999999999999999999988888776654 32 2456677888875 4789
Q ss_pred HHHHHHHcCC
Q 006702 219 ACTVLVQAGK 228 (634)
Q Consensus 219 iv~~Ll~~g~ 228 (634)
++++|+.++.
T Consensus 177 i~~~Lish~v 186 (300)
T PHA02884 177 ILKILVSHFI 186 (300)
T ss_pred HHHHHHHHHH
Confidence 9999999873
No 64
>PHA02741 hypothetical protein; Provisional
Probab=99.84 E-value=2.3e-20 Score=176.51 Aligned_cols=129 Identities=22% Similarity=0.247 Sum_probs=75.2
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHh------cCCCCCCCCCCCCcHHHHHHHhCC----HHHHHHHHhcCCCCCcccc
Q 006702 66 EPDGLGYYALQWAALNNRTAAAQYIIE------HGGDVNAADHTGQTALHWSAVRGA----IQVAELLLREGARVNAADM 135 (634)
Q Consensus 66 ~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~------~gad~n~~~~~g~tpLh~A~~~g~----~~iv~~Ll~~gad~~~~d~ 135 (634)
.+|..|.||||+|+..|+.++++.|++ .|++++.+|..|.||||+|+..|+ .+++++|+++|++++.++.
T Consensus 16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~ 95 (169)
T PHA02741 16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEM 95 (169)
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCc
Confidence 445566666666666666666666542 245666666666666666666666 3556666666666655553
Q ss_pred -CCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcC
Q 006702 136 -YGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLD 194 (634)
Q Consensus 136 -~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g 194 (634)
.|.||||+|+..++.+++++|+...+++++.+|.+|.||||.|+..++.+++++|++.+
T Consensus 96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~ 155 (169)
T PHA02741 96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIV 155 (169)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Confidence 55555555555555555555554335555555555555555555555555555555443
No 65
>PHA02741 hypothetical protein; Provisional
Probab=99.83 E-value=8e-20 Score=172.80 Aligned_cols=129 Identities=19% Similarity=0.233 Sum_probs=82.2
Q ss_pred CCCCCCCCcHHHHHHHhCCHHHHHHHHh------cCCCCCccccCCChHHHHHHHhCC----HHHHHHHHHccCCCCCCC
Q 006702 98 NAADHTGQTALHWSAVRGAIQVAELLLR------EGARVNAADMYGYQTTHVAAQYGQ----TAFLYHIVSKWNADPDVP 167 (634)
Q Consensus 98 n~~~~~g~tpLh~A~~~g~~~iv~~Ll~------~gad~~~~d~~g~t~L~~Aa~~g~----~~~v~~Ll~~~~~~~~~~ 167 (634)
+.++..|.||||+|++.|+.++++.|++ .|++++.+|..|.||||+|+..|+ .+++++|++. |++++.+
T Consensus 15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~-gadin~~ 93 (169)
T PHA02741 15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL-GADINAQ 93 (169)
T ss_pred hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc-CCCCCCC
Confidence 3456678888888888888888877753 245666666666666666666666 3555555554 6666665
Q ss_pred CC-CCChHHHHHHhcCCHHHHHHHhh-cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 006702 168 DN-DGRSPLHWAAYKGFADCIRLLLF-LDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAG 227 (634)
Q Consensus 168 d~-~g~t~Lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g 227 (634)
+. .|.||||+|+..++.+++++|+. .|++++.+|.+|.||||+|+..++.+++++|++.+
T Consensus 94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~ 155 (169)
T PHA02741 94 EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIV 155 (169)
T ss_pred CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Confidence 53 56666666666666666666665 36666666666666666666666666666666554
No 66
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.82 E-value=1e-19 Score=162.09 Aligned_cols=144 Identities=24% Similarity=0.246 Sum_probs=111.1
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHH
Q 006702 40 DVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQV 119 (634)
Q Consensus 40 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~i 119 (634)
.+..|+..+.+..|+.||+...-.+|.+|.+|+||||-|+.+|+.+||+.|+..||+++.+...|+||||-||.-.+.++
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~v 145 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEV 145 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhH
Confidence 36678888888888888876556678888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHhcCCCCCccccCCChHHHHHHHhCCH-HHHHHHHHccCCCCCCCCCCCChHHHHHHhcCC
Q 006702 120 AELLLREGARVNAADMYGYQTTHVAAQYGQT-AFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGF 183 (634)
Q Consensus 120 v~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~-~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~ 183 (634)
+.+|+++|+|+++......||||+|+...+. ..+.+|+...++.+..++..+.||+.+|-+.+-
T Consensus 146 a~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~ 210 (228)
T KOG0512|consen 146 AGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSM 210 (228)
T ss_pred HHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhh
Confidence 8888888888888877778888888776554 455666666667777777777777777766543
No 67
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.82 E-value=1.6e-19 Score=183.47 Aligned_cols=153 Identities=19% Similarity=0.199 Sum_probs=134.1
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCC----CCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcH
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPD----GLGYYALQWAALNNRTAAAQYIIEHGGDVNAAD-HTGQTA 107 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d----~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~-~~g~tp 107 (634)
++....++|+.|++.|+.++++.|++ .|++++.++ ..|.||||+|+..++.+++++|+++|||+|.++ ..|.||
T Consensus 29 d~~~~~~lL~~A~~~~~~eivk~LL~-~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~Tp 107 (300)
T PHA02884 29 NKICIANILYSSIKFHYTDIIDAILK-LGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITP 107 (300)
T ss_pred CcCCCCHHHHHHHHcCCHHHHHHHHH-CCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCH
Confidence 45556777899999999999999998 899999874 589999999999999999999999999999864 579999
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHH
Q 006702 108 LHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCI 187 (634)
Q Consensus 108 Lh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v 187 (634)
||.|+..|+.+++++|+++|++++.+|..|.||||+|++.++.+++..+. +. ..+..+.+|++.+ ++.+++
T Consensus 108 Lh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~---~n~ei~ 178 (300)
T PHA02884 108 LYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC---DN---EISNFYKHPKKIL---INFDIL 178 (300)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc---CC---cccccccChhhhh---ccHHHH
Confidence 99999999999999999999999999999999999999999888775543 22 2466677888865 468999
Q ss_pred HHHhhcCC
Q 006702 188 RLLLFLDA 195 (634)
Q Consensus 188 ~~Ll~~ga 195 (634)
++|+.+++
T Consensus 179 ~~Lish~v 186 (300)
T PHA02884 179 KILVSHFI 186 (300)
T ss_pred HHHHHHHH
Confidence 99998876
No 68
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.81 E-value=6.2e-20 Score=170.91 Aligned_cols=132 Identities=18% Similarity=0.217 Sum_probs=74.4
Q ss_pred CcCCCCCCchHHHHHHHcCCHHHHHHHHhcCC--C-----CCCCCCCCCcHHHHHHHhCCHH---HHHHHHhcCCCCCcc
Q 006702 64 VSEPDGLGYYALQWAALNNRTAAAQYIIEHGG--D-----VNAADHTGQTALHWSAVRGAIQ---VAELLLREGARVNAA 133 (634)
Q Consensus 64 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~ga--d-----~n~~~~~g~tpLh~A~~~g~~~---iv~~Ll~~gad~~~~ 133 (634)
.+.+|..|.||||+|+..|+. +++++..+. + ++.+|..|.||||+|+..|+.+ ++++|++.|++++.+
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~ 87 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK 87 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc
Confidence 344566677777777776662 233222221 1 2234556666666666666553 455666666666665
Q ss_pred c-cCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCC
Q 006702 134 D-MYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYR 197 (634)
Q Consensus 134 d-~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~ 197 (634)
+ ..|.||||+|+..++.+++++|+.+.+++++.+|..|.||||+|+..|+.+++++|++.|++.
T Consensus 88 ~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 88 ERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQC 152 (154)
T ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 5 356666666666666666665555445555555555555665555555555555555555544
No 69
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.80 E-value=1.5e-19 Score=168.39 Aligned_cols=132 Identities=21% Similarity=0.209 Sum_probs=107.3
Q ss_pred CCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCC--C-----CCccccCCChHHHHHHHhCCHH---HHHHHHHccCCCCCC
Q 006702 97 VNAADHTGQTALHWSAVRGAIQVAELLLREGA--R-----VNAADMYGYQTTHVAAQYGQTA---FLYHIVSKWNADPDV 166 (634)
Q Consensus 97 ~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~ga--d-----~~~~d~~g~t~L~~Aa~~g~~~---~v~~Ll~~~~~~~~~ 166 (634)
++.+|..|.||||+|++.|+. ++++...+. + +..+|..|.||||+|+..|+.+ ++++|++. |++++.
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~-gadin~ 86 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEW-GADING 86 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHc-CCCccc
Confidence 456778899999999999983 444433322 2 2346888999999999988864 57777776 899999
Q ss_pred CC-CCCChHHHHHHhcCCHHHHHHHhh-cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 006702 167 PD-NDGRSPLHWAAYKGFADCIRLLLF-LDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKED 231 (634)
Q Consensus 167 ~d-~~g~t~Lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d 231 (634)
+| ..|.||||+|+..++.+++++|+. .|++++.+|..|.||||+|+..|+.+++++|+++|++.+
T Consensus 87 ~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 87 KERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 88 489999999999999999999997 489999999999999999999999999999999986543
No 70
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.79 E-value=1.2e-19 Score=198.63 Aligned_cols=225 Identities=26% Similarity=0.316 Sum_probs=197.5
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCC-CCCCCcHHHHH
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAA-DHTGQTALHWS 111 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~-~~~g~tpLh~A 111 (634)
.+...+++|-.|+..|+.|+++.|+. .|+++..+|+.|.+||.+|+-.||..+|+.|+++-++++++ |..+.|+|.+|
T Consensus 753 Te~n~~t~LT~acaggh~e~vellv~-rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSla 831 (2131)
T KOG4369|consen 753 TEPNIKTNLTSACAGGHREEVELLVV-RGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLA 831 (2131)
T ss_pred cCccccccccccccCccHHHHHHHHH-hcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEe
Confidence 45567899999999999999999998 79999999999999999999999999999999999999876 55889999999
Q ss_pred HHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCC--CCCCChHHHHHHhcCCHHHHHH
Q 006702 112 AVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVP--DNDGRSPLHWAAYKGFADCIRL 189 (634)
Q Consensus 112 ~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~--d~~g~t~Lh~A~~~g~~~~v~~ 189 (634)
|..|+.++|++||.+|++-..++....|||.+|...|..+++..|+.. |..++.+ .+.|-.||++|..+|+.+.++.
T Consensus 832 csggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~-GseInSrtgSklgisPLmlatmngh~~at~~ 910 (2131)
T KOG4369|consen 832 CSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSS-GSEINSRTGSKLGISPLMLATMNGHQAATLS 910 (2131)
T ss_pred cCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhc-ccccccccccccCcchhhhhhhccccHHHHH
Confidence 999999999999999999999999999999999999999999999988 8777776 4568899999999999999999
Q ss_pred HhhcCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHH
Q 006702 190 LLFLDAYRGRQ-DKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNA 261 (634)
Q Consensus 190 Ll~~ga~~~~~-d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~ 261 (634)
|++.|.|+|.. ..+.+|+|-+|+-.|..|+|.+||.+. +++..+-+.|.|||.-++..|..|+-.+|...
T Consensus 911 ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~--anvehRaktgltplme~AsgGyvdvg~~li~~ 981 (2131)
T KOG4369|consen 911 LLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQ--ANVEHRAKTGLTPLMEMASGGYVDVGNLLIAA 981 (2131)
T ss_pred HhcccchhccccccccccceeeccccCcchHHHHHHHHh--hhhhhhcccCCcccchhhcCCccccchhhhhc
Confidence 99999888764 335678888888888888888888876 56667778888888888888888877776543
No 71
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.78 E-value=6.1e-18 Score=183.73 Aligned_cols=219 Identities=25% Similarity=0.290 Sum_probs=179.4
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhcc--------CCCCcCCCCCCchHHHHHHHc---CCHHHHHHHHhcCCC-CCC-
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECE--------GCSVSEPDGLGYYALQWAALN---NRTAAAQYIIEHGGD-VNA- 99 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~--------~~~~~~~d~~g~t~Lh~Aa~~---g~~~~v~~Ll~~gad-~n~- 99 (634)
.+...+.+++.|...+..+.+..++... ..+++++...|.|+||.|..+ ++.++++.|++.-+. +|.
T Consensus 97 l~~~d~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~ 176 (782)
T KOG3676|consen 97 LKRFDRDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDI 176 (782)
T ss_pred hhhcchhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhh
Confidence 3444558899999999999999988733 256788888999999999984 456899999986432 222
Q ss_pred --CC-CCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccc-----------------------cCCChHHHHHHHhCCHHHH
Q 006702 100 --AD-HTGQTALHWSAVRGAIQVAELLLREGARVNAAD-----------------------MYGYQTTHVAAQYGQTAFL 153 (634)
Q Consensus 100 --~~-~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d-----------------------~~g~t~L~~Aa~~g~~~~v 153 (634)
-+ ..|+||||.|+.+.+.++|++|++.|||++++- ..|..||..||..++.+++
T Consensus 177 ~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eiv 256 (782)
T KOG3676|consen 177 YTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIV 256 (782)
T ss_pred hhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHH
Confidence 12 369999999999999999999999999987651 2477899999999999999
Q ss_pred HHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-
Q 006702 154 YHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAY--RGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKE- 230 (634)
Q Consensus 154 ~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~--~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~- 230 (634)
.+|+++ |+|++.+|..|+|.||..+..-..++..++++.|++ ...+|.+|.|||.+|++.|..++.+.+++.....
T Consensus 257 rlLl~~-gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~ 335 (782)
T KOG3676|consen 257 RLLLAH-GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTD 335 (782)
T ss_pred HHHHhc-CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccc
Confidence 999997 999999999999999999999888999999999999 8889999999999999999999999999982111
Q ss_pred -----------CccccCC--CCCCHHHHHHhcCcH
Q 006702 231 -----------DLMVTDN--TGLTPAQLASDKNHR 252 (634)
Q Consensus 231 -----------d~~~~d~--~g~Tpl~~A~~~~~~ 252 (634)
+++..|. +-.+.|.+.+.....
T Consensus 336 W~YGpvtsslYpL~~iDT~~n~~SvLeivvyg~~~ 370 (782)
T KOG3676|consen 336 WAYGPVTSSLYPLNSIDTIGNENSVLEIVVYGIKN 370 (782)
T ss_pred eeecccccccccchhcccccchhhhhhhhhcCCcH
Confidence 2333332 445778877766433
No 72
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.78 E-value=3.1e-18 Score=152.70 Aligned_cols=140 Identities=26% Similarity=0.319 Sum_probs=100.0
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHH
Q 006702 74 ALQWAALNNRTAAAQYIIEHGGD-VNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAF 152 (634)
Q Consensus 74 ~Lh~Aa~~g~~~~v~~Ll~~gad-~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~ 152 (634)
.+.||+..+....|+.||+..++ +|.+|.+|.||||.|+++|+.+||+.|+..||+++++...|+||||-|+...+.++
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~v 145 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEV 145 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhH
Confidence 56778888888888888877665 78888888888888888888888888888888887777777777777777777777
Q ss_pred HHHHHHccCCCCCCCCCCCChHHHHHHhcCCH-HHHHHHh-hcCCCCCCCCCCCCcHHHHHHHc
Q 006702 153 LYHIVSKWNADPDVPDNDGRSPLHWAAYKGFA-DCIRLLL-FLDAYRGRQDKEGCTPLHWAAIR 214 (634)
Q Consensus 153 v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~-~~v~~Ll-~~ga~~~~~d~~g~TpLh~A~~~ 214 (634)
+-.||++ |+|++.......||||.||...+. ..+++|+ ..+.++..++..+.||+.+|-+.
T Consensus 146 a~~LLqh-gaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT 208 (228)
T KOG0512|consen 146 AGRLLQH-GADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRT 208 (228)
T ss_pred HHHHHhc-cCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHh
Confidence 7777766 777777777677777777766554 3444443 34555555666666666666544
No 73
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.77 E-value=2.6e-19 Score=196.04 Aligned_cols=247 Identities=20% Similarity=0.241 Sum_probs=208.3
Q ss_pred ccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcC-CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 006702 32 VDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSE-PDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHW 110 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~-~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~ 110 (634)
..+..+.++|..|+-.|+..+|+.|+. .-++++. .|..+.|+|.+||..|+.++|++||..|++-..++-...|||-+
T Consensus 785 hrdkkgf~plImaatagh~tvV~~llk-~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsl 863 (2131)
T KOG4369|consen 785 HRDKKGFVPLIMAATAGHITVVQDLLK-AHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSL 863 (2131)
T ss_pred ccccccchhhhhhcccCchHHHHHHHh-hhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhh
Confidence 457778999999999999999999998 5566665 47889999999999999999999999999988888889999999
Q ss_pred HHHhCCHHHHHHHHhcCCCCCccc--cCCChHHHHHHHhCCHHHHHHHHHccCCCCCCC-CCCCChHHHHHHhcCCHHHH
Q 006702 111 SAVRGAIQVAELLLREGARVNAAD--MYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVP-DNDGRSPLHWAAYKGFADCI 187 (634)
Q Consensus 111 A~~~g~~~iv~~Ll~~gad~~~~d--~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~-d~~g~t~Lh~A~~~g~~~~v 187 (634)
|...|.++||+.|+.+|+.++.+. +.|..||++|+.+|+.+.++.|++. |.|+|.. ..+.+|+|-+|+..|+.+++
T Consensus 864 a~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~-gsdiNaqIeTNrnTaltla~fqgr~evv 942 (2131)
T KOG4369|consen 864 ARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQP-GSDINAQIETNRNTALTLALFQGRPEVV 942 (2131)
T ss_pred hcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcc-cchhccccccccccceeeccccCcchHH
Confidence 999999999999999999988764 6789999999999999999999988 8888764 45678999999999999999
Q ss_pred HHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHH-Hhc
Q 006702 188 RLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARR-LLD 266 (634)
Q Consensus 188 ~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~-l~~ 266 (634)
.+||...+++..+-+.|.|||+-++.-|..|+-++|+.+|++.+..-.-..-.|+|-+++.+||...+..|.+... ...
T Consensus 943 ~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v 1022 (2131)
T KOG4369|consen 943 FLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRV 1022 (2131)
T ss_pred HHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceec
Confidence 9999999999999999999999999999999999999999765544444555688888888888888777654221 222
Q ss_pred ccCCCCCCcccccc
Q 006702 267 KRCDGNSPIGKISK 280 (634)
Q Consensus 267 ~~~~~~~~~~~~~~ 280 (634)
++..|.+++-.+..
T Consensus 1023 ~NkkG~T~Lwla~~ 1036 (2131)
T KOG4369|consen 1023 PNKKGCTVLWLASA 1036 (2131)
T ss_pred ccCCCCcccchhcc
Confidence 33344444443333
No 74
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.77 E-value=1.6e-18 Score=179.96 Aligned_cols=204 Identities=25% Similarity=0.320 Sum_probs=171.7
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHH
Q 006702 74 ALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFL 153 (634)
Q Consensus 74 ~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v 153 (634)
.+.-|+..|..+=++.|+..|+++|..+.+|.|+||-+|.-.+.+||++|+++|++++..|..|+||||.|+..|+..++
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~ 122 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIV 122 (527)
T ss_pred HHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCCCCCCCCCChHHHHHHh-------------cC-C------------HHHHHHHhhcCCCCCCCCCCCCcH
Q 006702 154 YHIVSKWNADPDVPDNDGRSPLHWAAY-------------KG-F------------ADCIRLLLFLDAYRGRQDKEGCTP 207 (634)
Q Consensus 154 ~~Ll~~~~~~~~~~d~~g~t~Lh~A~~-------------~g-~------------~~~v~~Ll~~ga~~~~~d~~g~Tp 207 (634)
++|++. |+++...+.+|..|+..+.. .| . .+-++..+..|.+.+..+..|-|.
T Consensus 123 ~~li~~-gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~ 201 (527)
T KOG0505|consen 123 EYLIQH-GANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATA 201 (527)
T ss_pred HHHHHh-hhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchH
Confidence 999988 88888887777766543221 11 1 111223344788888888889999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHHH-hcccCCCCCCcccccc
Q 006702 208 LHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARRL-LDKRCDGNSPIGKISK 280 (634)
Q Consensus 208 Lh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~l-~~~~~~~~~~~~~~~~ 280 (634)
||.|+.+|..++.++|+++| .+++.+|.+|.||||.|+.-+..++.++|...+.. ......+.+|+..+..
T Consensus 202 lHvAaa~Gy~e~~~lLl~ag--~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 202 LHVAAANGYTEVAALLLQAG--YSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADE 273 (527)
T ss_pred HHHHHhhhHHHHHHHHHHhc--cCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence 99999999999999999999 67889999999999999999999999988765543 3344456667665554
No 75
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.75 E-value=9.7e-19 Score=167.46 Aligned_cols=158 Identities=21% Similarity=0.292 Sum_probs=137.3
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHH
Q 006702 40 DVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQV 119 (634)
Q Consensus 40 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~i 119 (634)
+++.-++.|+.-.|+..|+...-|.|.-|..|.+||||||+.|+..+++.|+.+|+.+|..+....||||+|+..|+.++
T Consensus 3 dif~wcregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdi 82 (448)
T KOG0195|consen 3 DIFGWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDI 82 (448)
T ss_pred hhhhhhhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHH
Confidence 45667788888888888887778899999999999999999999999999999999999999988999999999999999
Q ss_pred HHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCC
Q 006702 120 AELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRG 198 (634)
Q Consensus 120 v~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~ 198 (634)
|+.|++..+|+|+.+..|.||||+|+..|...+.+-|+.. |+.++..+++|.|||..|--.-...+.+.--+.|..++
T Consensus 83 vqkll~~kadvnavnehgntplhyacfwgydqiaedli~~-ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~n 160 (448)
T KOG0195|consen 83 VQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISC-GAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPN 160 (448)
T ss_pred HHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhc-cceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999999999987 99999999999999988743322222233334566655
No 76
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.70 E-value=1e-16 Score=174.30 Aligned_cols=222 Identities=23% Similarity=0.270 Sum_probs=176.0
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCC---------------CcCCCCCCchHHHHHHHcCCHHHHHHHHhcC---------
Q 006702 39 NDVYTAAAYGDLEKLQRLVECEGCS---------------VSEPDGLGYYALQWAALNNRTAAAQYIIEHG--------- 94 (634)
Q Consensus 39 ~~L~~Aa~~g~~~~v~~Ll~~~~~~---------------~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g--------- 94 (634)
.+++..-..|.+..+..++...... ++..+...+.++..|...+..+....|++.+
T Consensus 54 ~~~~~~~~~g~l~~v~~l~~~~~~~~~~~~~~~~~~~~~~p~~l~~~d~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~ 133 (782)
T KOG3676|consen 54 KGLFYNGGKGKLIPLESLVCERNKERNPLDGAFDRKKKSGPNILKRFDRDALFIADSEGALSDLDGLLKFLRKSKYRLTD 133 (782)
T ss_pred ccccccCCCCcccchHHHHHHHhhhhcccccccccccccCcchhhhcchhhhhhccccccHHHHhccchhhhhhhhhhhh
Confidence 3444455556666666666522211 1212222336778888888888888777655
Q ss_pred CCCCCCCCCCCcHHHHHHH---hCCHHHHHHHHhcCCC----C-CccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCC
Q 006702 95 GDVNAADHTGQTALHWSAV---RGAIQVAELLLREGAR----V-NAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDV 166 (634)
Q Consensus 95 ad~n~~~~~g~tpLh~A~~---~g~~~iv~~Ll~~gad----~-~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~ 166 (634)
-+++.+...|+|.||.|.. .++.++++.|++.-.. + ......|+||||+|+.+.+.++|.+|++. |+|+++
T Consensus 134 w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~-gADV~a 212 (782)
T KOG3676|consen 134 WKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAA-GADVHA 212 (782)
T ss_pred hccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHc-CCchhh
Confidence 4678888899999999987 3566899999985322 2 22346899999999999999999999988 999865
Q ss_pred C---------CC--------------CCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 006702 167 P---------DN--------------DGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVL 223 (634)
Q Consensus 167 ~---------d~--------------~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~L 223 (634)
+ |. -|..||.+||..++.+++++|+++|||++.+|..|+|.||..+..-..++..++
T Consensus 213 Ra~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~ 292 (782)
T KOG3676|consen 213 RACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLA 292 (782)
T ss_pred HhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHH
Confidence 3 11 267899999999999999999999999999999999999999999899999999
Q ss_pred HHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHH
Q 006702 224 VQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNA 261 (634)
Q Consensus 224 l~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~ 261 (634)
+++|++.....+|++|.|||.+|+..|..++.+.+.+.
T Consensus 293 L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 293 LELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred HhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 99997655889999999999999999999999887654
No 77
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.70 E-value=1.2e-16 Score=134.03 Aligned_cols=89 Identities=38% Similarity=0.629 Sum_probs=70.2
Q ss_pred HHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHH
Q 006702 41 VYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVA 120 (634)
Q Consensus 41 L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv 120 (634)
||.||+.|+.++++.|++ .+.+++. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++
T Consensus 1 L~~A~~~~~~~~~~~ll~-~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 75 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLE-KGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIV 75 (89)
T ss_dssp HHHHHHTTTHHHHHHHHH-TTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHH
T ss_pred CHHHHHcCCHHHHHHHHH-CcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHH
Confidence 678888888888888888 5665555 77888888888888888888888888888888888888888888888888
Q ss_pred HHHHhcCCCCCccc
Q 006702 121 ELLLREGARVNAAD 134 (634)
Q Consensus 121 ~~Ll~~gad~~~~d 134 (634)
++|+++|++++.+|
T Consensus 76 ~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 76 KLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHTTT-TTSS-
T ss_pred HHHHHcCCCCCCcC
Confidence 88888888887764
No 78
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.69 E-value=6.6e-17 Score=155.00 Aligned_cols=131 Identities=30% Similarity=0.510 Sum_probs=114.7
Q ss_pred cCCHHHHHHHH-hcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHc
Q 006702 81 NNRTAAAQYII-EHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSK 159 (634)
Q Consensus 81 ~g~~~~v~~Ll-~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~ 159 (634)
.|+.--|++.+ +..-|.|.-|..|.+||||||+.|+..+|+.|+..|+.+|..+.-..||||+|+..|+-++++.|++.
T Consensus 10 egna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~ 89 (448)
T KOG0195|consen 10 EGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSR 89 (448)
T ss_pred cCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHH
Confidence 33333334333 34567888899999999999999999999999999999999999889999999999999999999987
Q ss_pred cCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHH
Q 006702 160 WNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAA 212 (634)
Q Consensus 160 ~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~ 212 (634)
.+|+|..+..|+||||+||.-|+..+.+-|+..|+.++..+++|.|||..|-
T Consensus 90 -kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak 141 (448)
T KOG0195|consen 90 -KADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK 141 (448)
T ss_pred -hcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence 8999999999999999999999999999999999999999999999998764
No 79
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.68 E-value=9.9e-16 Score=135.80 Aligned_cols=122 Identities=39% Similarity=0.600 Sum_probs=65.0
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHh
Q 006702 68 DGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQY 147 (634)
Q Consensus 68 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~ 147 (634)
|..|.||||+|+..++.+++++|++.+++.+..+..|.||||.|+..++.+++++|++.|++++..+..|.||+|.|+..
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~ 83 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN 83 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 34455666666666666666666665555555555555666666665555566666555555554444555555555555
Q ss_pred CCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 006702 148 GQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLL 190 (634)
Q Consensus 148 g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 190 (634)
++.+++++|++. +.+.+..|..+.||++.|...++.+++++|
T Consensus 84 ~~~~~~~~L~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 84 GNLDVVKLLLKH-GADVNARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred CcHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 555555554443 344444444444444444444444444443
No 80
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.68 E-value=1e-15 Score=135.63 Aligned_cols=124 Identities=42% Similarity=0.615 Sum_probs=96.8
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHH
Q 006702 100 ADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAA 179 (634)
Q Consensus 100 ~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 179 (634)
+|..|.||||.|+..|+.+++++|++.|++.+.++..|.+|+|.|+..++.+++++|+.. +.+++..+..+.||+|+|+
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~l~~a~ 81 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEK-GADVNARDKDGNTPLHLAA 81 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHH
Confidence 456788888888888888888888888887777777888888888888888888777776 6667777777778888887
Q ss_pred hcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 006702 180 YKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLV 224 (634)
Q Consensus 180 ~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll 224 (634)
..++.+++++|++.+.+.+..|..|.|||++|+..++.+++++|+
T Consensus 82 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 82 RNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 777777777777777777777777777777777777777777763
No 81
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.66 E-value=5.4e-16 Score=130.04 Aligned_cols=89 Identities=33% Similarity=0.577 Sum_probs=69.0
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHH
Q 006702 75 LQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLY 154 (634)
Q Consensus 75 Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~ 154 (634)
||+||..|+.+++++|++.+.+++. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 6788888888888888888777766 777888888888888888888888888888777888888888888878777
Q ss_pred HHHHccCCCCCCCC
Q 006702 155 HIVSKWNADPDVPD 168 (634)
Q Consensus 155 ~Ll~~~~~~~~~~d 168 (634)
+|++. |++++.+|
T Consensus 77 ~Ll~~-g~~~~~~n 89 (89)
T PF12796_consen 77 LLLEH-GADVNIRN 89 (89)
T ss_dssp HHHHT-TT-TTSS-
T ss_pred HHHHc-CCCCCCcC
Confidence 77766 77777654
No 82
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.58 E-value=6.2e-15 Score=118.04 Aligned_cols=104 Identities=23% Similarity=0.299 Sum_probs=92.0
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHH
Q 006702 39 NDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQ 118 (634)
Q Consensus 39 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~ 118 (634)
..+.+++++|.++.|+..+. .|.++|..- .|++|||+||-.|..+++++|+..|++++.+|+.|.|||.-|+..||.+
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~-~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~ 81 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVN-EGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRD 81 (117)
T ss_pred hhHhhhhccCcHHHHHHHHH-ccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHH
Confidence 45778999999999999988 678888765 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCccccCCChHHHHH
Q 006702 119 VAELLLREGARVNAADMYGYQTTHVA 144 (634)
Q Consensus 119 iv~~Ll~~gad~~~~d~~g~t~L~~A 144 (634)
+|++|++.|||-..+.-+|.+.+..+
T Consensus 82 cVklLL~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 82 CVKLLLQNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred HHHHHHHcCcccceeCCCchhHHhhc
Confidence 99999999999888887887665543
No 83
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.57 E-value=4.3e-14 Score=138.93 Aligned_cols=127 Identities=36% Similarity=0.510 Sum_probs=90.6
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCC-----HHHHHHHHHccCC---CCCCCCCCC
Q 006702 100 ADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQ-----TAFLYHIVSKWNA---DPDVPDNDG 171 (634)
Q Consensus 100 ~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~-----~~~v~~Ll~~~~~---~~~~~d~~g 171 (634)
.+..+.++++.|+..+..+++++|+..|++++.+|..|.||||.|+..++ .++++.|++. |+ ..+.+|..|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~-g~~~~~~~~~~~~g 147 (235)
T COG0666 69 RDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEA-GADLDVNNLRDEDG 147 (235)
T ss_pred CCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHc-CCCCCCccccCCCC
Confidence 34445566666666666666666666666666666666666666666666 6666666665 44 555667888
Q ss_pred ChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 006702 172 RSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAG 227 (634)
Q Consensus 172 ~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g 227 (634)
.||||+|+..|+.+++++|++.|++++..+..|.|++++|+..++.++++.+++.+
T Consensus 148 ~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 148 NTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 88888888888888888888888888888888888888888888888888888764
No 84
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.50 E-value=1.2e-13 Score=110.76 Aligned_cols=99 Identities=31% Similarity=0.473 Sum_probs=52.9
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHH
Q 006702 108 LHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCI 187 (634)
Q Consensus 108 Lh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v 187 (634)
+.|++.+|..+-|+..+..|-+++..- .|++|||+|+.+|+.+++++|+.. |++++.+|+.|-|||..|+..|+.++|
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~i-GA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISI-GANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred HhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHh-ccccCCccccCCcHHHHHHHHhhHHHH
Confidence 445555555555555555554444322 445555555555555555555544 555555555555555555555555555
Q ss_pred HHHhhcCCCCCCCCCCCCcHH
Q 006702 188 RLLLFLDAYRGRQDKEGCTPL 208 (634)
Q Consensus 188 ~~Ll~~ga~~~~~d~~g~TpL 208 (634)
++|++.|++...+..+|.+.+
T Consensus 84 klLL~~GAdrt~~~PdG~~~~ 104 (117)
T KOG4214|consen 84 KLLLQNGADRTIHAPDGTALI 104 (117)
T ss_pred HHHHHcCcccceeCCCchhHH
Confidence 555555555555555554433
No 85
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.48 E-value=3.2e-13 Score=132.73 Aligned_cols=133 Identities=32% Similarity=0.403 Sum_probs=114.2
Q ss_pred CCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCC-----HHHHHHHHhcCC---CCCc
Q 006702 61 GCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGA-----IQVAELLLREGA---RVNA 132 (634)
Q Consensus 61 ~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~-----~~iv~~Ll~~ga---d~~~ 132 (634)
.......+..+.++++.|+..+..+++++|++.|++++.++..|.||||+|+..|+ .++++.|++.|+ +.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~ 142 (235)
T COG0666 63 DRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNL 142 (235)
T ss_pred ccccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccc
Confidence 34445566778889999999999999999999999998888999999999999998 899999999998 5566
Q ss_pred cccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcC
Q 006702 133 ADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLD 194 (634)
Q Consensus 133 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g 194 (634)
+|..|.||||+|+..|+.++++.|++. +++++..+..|.|++++|+..++.++++.++..+
T Consensus 143 ~~~~g~tpl~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 143 RDEDGNTPLHWAALNGDADIVELLLEA-GADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred cCCCCCchhHHHHHcCchHHHHHHHhc-CCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 688999999999999999888888887 8888888899999999999999999888888843
No 86
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.44 E-value=7e-13 Score=127.65 Aligned_cols=123 Identities=26% Similarity=0.305 Sum_probs=112.6
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAAD-HTGQTALHWSA 112 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~-~~g~tpLh~A~ 112 (634)
-+...++|..++-.|+.+....||+ .-..+|..|+.|.|+|..|+..|+.+++++||+.|+|+|... ..+.||||+|+
T Consensus 9 ld~~~~~Lle~i~Kndt~~a~~LLs-~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAA 87 (396)
T KOG1710|consen 9 LDAPKSPLLEAIDKNDTEAALALLS-TVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAA 87 (396)
T ss_pred ccchhhHHHHHHccCcHHHHHHHHH-HhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHH
Confidence 3456789999999999999999998 455689999999999999999999999999999999998754 47899999999
Q ss_pred HhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHH
Q 006702 113 VRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIV 157 (634)
Q Consensus 113 ~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll 157 (634)
.+|+.++.++|++.|+.+...|.-|+|+-.+|+.-|+.+.|..+-
T Consensus 88 LSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 88 LSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIIN 132 (396)
T ss_pred HcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHh
Confidence 999999999999999999999999999999999999988886553
No 87
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.36 E-value=3.8e-12 Score=145.08 Aligned_cols=107 Identities=24% Similarity=0.300 Sum_probs=98.3
Q ss_pred hhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCH
Q 006702 38 RNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAI 117 (634)
Q Consensus 38 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~ 117 (634)
...|+.|+..|+.+.++.|++ .|++++.+|..|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+.
T Consensus 83 ~~~L~~aa~~G~~~~vk~LL~-~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~ 161 (664)
T PTZ00322 83 TVELCQLAASGDAVGARILLT-GGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFR 161 (664)
T ss_pred HHHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcH
Confidence 346899999999999999998 8899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc-------CCCCCccccCCChHHHHHH
Q 006702 118 QVAELLLRE-------GARVNAADMYGYQTTHVAA 145 (634)
Q Consensus 118 ~iv~~Ll~~-------gad~~~~d~~g~t~L~~Aa 145 (634)
+++++|+++ |++++..+..|.+|+..+.
T Consensus 162 ~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 162 EVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 999999998 8888888888887766554
No 88
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.35 E-value=5.4e-12 Score=143.84 Aligned_cols=106 Identities=24% Similarity=0.301 Sum_probs=92.0
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHH
Q 006702 74 ALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFL 153 (634)
Q Consensus 74 ~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v 153 (634)
.|+.|+..|+.++++.|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv 164 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVV 164 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHc------cCCCCCCCCCCCChHHHHHH
Q 006702 154 YHIVSK------WNADPDVPDNDGRSPLHWAA 179 (634)
Q Consensus 154 ~~Ll~~------~~~~~~~~d~~g~t~Lh~A~ 179 (634)
++|+.. .+++.+..+..|.+|+..+.
T Consensus 165 ~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 165 QLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 988875 35666677777777766544
No 89
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.34 E-value=3.2e-12 Score=131.97 Aligned_cols=92 Identities=34% Similarity=0.460 Sum_probs=76.1
Q ss_pred HHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHH
Q 006702 41 VYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVA 120 (634)
Q Consensus 41 L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv 120 (634)
|..|+..|.+|+|+..+. .-.|+...+++|.|+||-|+..||.+||++||+.|+++|..|.+|+||||.||..+++.++
T Consensus 554 LLDaaLeGEldlVq~~i~-ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c 632 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIY-EVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC 632 (752)
T ss_pred HHhhhhcchHHHHHHHHH-hhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence 567888888888888887 5567778888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHhcCCCCCcc
Q 006702 121 ELLLREGARVNAA 133 (634)
Q Consensus 121 ~~Ll~~gad~~~~ 133 (634)
+.|++.|+.+.+.
T Consensus 633 kqLVe~GaavfAs 645 (752)
T KOG0515|consen 633 KQLVESGAAVFAS 645 (752)
T ss_pred HHHHhccceEEee
Confidence 8888888877554
No 90
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.33 E-value=1.4e-12 Score=98.91 Aligned_cols=55 Identities=49% Similarity=0.739 Sum_probs=21.2
Q ss_pred HHhcC-CCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHH
Q 006702 90 IIEHG-GDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVA 144 (634)
Q Consensus 90 Ll~~g-ad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A 144 (634)
||++| +++|.+|..|.||||+|+..|+.+++++|++.|+|++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 44555 55666666666666666666666666666666666666666666666654
No 91
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.32 E-value=3e-12 Score=96.35 Aligned_cols=54 Identities=39% Similarity=0.742 Sum_probs=37.5
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHH
Q 006702 71 GYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLL 124 (634)
Q Consensus 71 g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll 124 (634)
|.||||+|+..|+.+++++|+++|+|+|.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 567788888888888888887777777777777788888888888877777775
No 92
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.32 E-value=9.2e-12 Score=120.02 Aligned_cols=121 Identities=30% Similarity=0.363 Sum_probs=105.1
Q ss_pred CChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCC-CCCCCCcHHHHHHHcC
Q 006702 137 GYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGR-QDKEGCTPLHWAAIRG 215 (634)
Q Consensus 137 g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~TpLh~A~~~g 215 (634)
-..||.-++..+..+-...||+. -..+|.+|..|.++|..|+++|+.+++++|++.|+|+|. ++..+.||||.|+.+|
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~-vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG 90 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLST-VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG 90 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHH-hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence 34678888888888888888875 455889999999999999999999999999999999986 4567899999999999
Q ss_pred CHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHH
Q 006702 216 NLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGN 260 (634)
Q Consensus 216 ~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~ 260 (634)
+.++++.|++.|+ .....|.-|+|+-++|+--|+.+.|..+.+
T Consensus 91 n~dvcrllldaGa--~~~~vNsvgrTAaqmAAFVG~H~CV~iINN 133 (396)
T KOG1710|consen 91 NQDVCRLLLDAGA--RMYLVNSVGRTAAQMAAFVGHHECVAIINN 133 (396)
T ss_pred CchHHHHHHhccC--ccccccchhhhHHHHHHHhcchHHHHHHhc
Confidence 9999999999994 556788999999999999999999888754
No 93
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.28 E-value=7.5e-12 Score=94.18 Aligned_cols=54 Identities=46% Similarity=0.770 Sum_probs=37.8
Q ss_pred CChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 006702 171 GRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLV 224 (634)
Q Consensus 171 g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll 224 (634)
|+||||+|+..|+.+++++|++.|++++.+|.+|.||||+|++.|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 567888888888888888888778888777777888888888888888887775
No 94
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.27 E-value=4.2e-12 Score=96.18 Aligned_cols=56 Identities=34% Similarity=0.594 Sum_probs=34.1
Q ss_pred HHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 006702 56 LVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWS 111 (634)
Q Consensus 56 Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A 111 (634)
||+....+++.+|..|.||||+||..|+.+++++|++.|+|++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 46634489999999999999999999999999999999999999999999999997
No 95
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.24 E-value=2.6e-11 Score=125.37 Aligned_cols=118 Identities=27% Similarity=0.379 Sum_probs=102.2
Q ss_pred HHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 006702 141 THVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEAC 220 (634)
Q Consensus 141 L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv 220 (634)
|.-|+..|.+++|...+.+ -.|+...+.+|-|+||-|+..|+.++|++|++.|+++|..|.+|+||||+|+.-+++.++
T Consensus 554 LLDaaLeGEldlVq~~i~e-v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c 632 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYE-VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC 632 (752)
T ss_pred HHhhhhcchHHHHHHHHHh-hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence 3457889999999999987 788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCccccCCCCCCHHHHHH--hcCcHHHHHHHHH
Q 006702 221 TVLVQAGKKEDLMVTDNTGLTPAQLAS--DKNHRQVAFFLGN 260 (634)
Q Consensus 221 ~~Ll~~g~~~d~~~~d~~g~Tpl~~A~--~~~~~~i~~~L~~ 260 (634)
+.|++.|+ +-+..+-.++.||.+-+- +.|..++.+||..
T Consensus 633 kqLVe~Ga-avfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 633 KQLVESGA-AVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred HHHHhccc-eEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 99999996 333445567888887664 3567778888743
No 96
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.96 E-value=4.1e-09 Score=109.88 Aligned_cols=122 Identities=29% Similarity=0.363 Sum_probs=109.7
Q ss_pred hhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCC--CCCCCCCCCcHHHHHHHh
Q 006702 37 LRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGD--VNAADHTGQTALHWSAVR 114 (634)
Q Consensus 37 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad--~n~~~~~g~tpLh~A~~~ 114 (634)
....|..|+..+|+-.++..-. .|-++-.++.+..+.||+|+..|+-++|+|++++|.. ++..|..|+|+||-|+-.
T Consensus 866 iseeil~av~~~D~~klqE~h~-~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~ 944 (1004)
T KOG0782|consen 866 ISEEILRAVLSSDLMKLQETHL-NGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQ 944 (1004)
T ss_pred ccHHHHHHHHhccHHHHHHHHh-cCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHh
Confidence 3445899999999877777766 5667778889999999999999999999999999975 677788999999999999
Q ss_pred CCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHc
Q 006702 115 GAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSK 159 (634)
Q Consensus 115 g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~ 159 (634)
++..+.++|++.||.+...|..|.||-.-|-+.|..++..||-.+
T Consensus 945 ~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 945 RNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred cchHHHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 999999999999999999999999999999999999999998765
No 97
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.75 E-value=5.9e-09 Score=113.37 Aligned_cols=100 Identities=27% Similarity=0.365 Sum_probs=89.1
Q ss_pred cCCHHHHHHHHhcc-CCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCC-CCCcHHHHHHHhCCHHHHHHHH
Q 006702 47 YGDLEKLQRLVECE-GCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADH-TGQTALHWSAVRGAIQVAELLL 124 (634)
Q Consensus 47 ~g~~~~v~~Ll~~~-~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~-~g~tpLh~A~~~g~~~iv~~Ll 124 (634)
.+....++.+++.. +-..|..|..|+|+||+|+..++.+++++||++|+|++.+|. .|+||||.|+..|+++++-+||
T Consensus 27 Ks~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL 106 (1267)
T KOG0783|consen 27 KSEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLL 106 (1267)
T ss_pred cCChhHHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHH
Confidence 34554577777643 234788999999999999999999999999999999999997 7999999999999999999999
Q ss_pred hcCCCCCccccCCChHHHHHHH
Q 006702 125 REGARVNAADMYGYQTTHVAAQ 146 (634)
Q Consensus 125 ~~gad~~~~d~~g~t~L~~Aa~ 146 (634)
.+|+.+..+|++|.+||...++
T Consensus 107 ~~g~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 107 SKGRSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred hcCCceEEecccCCCHHHHHhh
Confidence 9999999999999999988876
No 98
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.70 E-value=6.4e-08 Score=100.02 Aligned_cols=95 Identities=26% Similarity=0.240 Sum_probs=80.2
Q ss_pred cCCCCCCchH------HHHHHHcCCHHHHHHHHhcCCCCCCCCC-CCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCC
Q 006702 65 SEPDGLGYYA------LQWAALNNRTAAAQYIIEHGGDVNAADH-TGQTALHWSAVRGAIQVAELLLREGARVNAADMYG 137 (634)
Q Consensus 65 ~~~d~~g~t~------Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~-~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g 137 (634)
..+|++|.+. ||-.++.|+.++.-.||..||++|..+. .|.||||.|++.|+..-+++|+-+|||+.+.|.+|
T Consensus 121 ~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~G 200 (669)
T KOG0818|consen 121 PCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSG 200 (669)
T ss_pred CCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCC
Confidence 3455556553 8888899999988888899999988775 68999999999999999999999999999999999
Q ss_pred ChHHHHHHHhCCHHHHHHHHHc
Q 006702 138 YQTTHVAAQYGQTAFLYHIVSK 159 (634)
Q Consensus 138 ~t~L~~Aa~~g~~~~v~~Ll~~ 159 (634)
.||+.+|-+.|+.++.+.|++.
T Consensus 201 mtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 201 MTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred CcHHHHHHhcCchHHHHHHHHH
Confidence 9999999999998888877764
No 99
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.68 E-value=6.9e-09 Score=112.83 Aligned_cols=91 Identities=30% Similarity=0.409 Sum_probs=78.2
Q ss_pred CCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCC
Q 006702 162 ADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDK-EGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGL 240 (634)
Q Consensus 162 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~ 240 (634)
--.+++|..|+|+||+|+..+..+++++|+++|+|+..+|. .|+||||.|+..|+.+++..||.+| +.+..+|++|.
T Consensus 43 n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g--~SL~i~Dkegl 120 (1267)
T KOG0783|consen 43 NLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKG--RSLRIKDKEGL 120 (1267)
T ss_pred hhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcC--CceEEecccCC
Confidence 34678899999999999999999999999999999999887 5899999999999999999999998 67788999999
Q ss_pred CHHHHHHhcCcHHH
Q 006702 241 TPAQLASDKNHRQV 254 (634)
Q Consensus 241 Tpl~~A~~~~~~~i 254 (634)
+||++.++....++
T Consensus 121 splq~~~r~~~~~i 134 (1267)
T KOG0783|consen 121 SPLQFLSRVLSSTI 134 (1267)
T ss_pred CHHHHHhhcccccc
Confidence 99998877444443
No 100
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.66 E-value=2.4e-08 Score=102.63 Aligned_cols=95 Identities=28% Similarity=0.297 Sum_probs=88.0
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Q 006702 168 DNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLAS 247 (634)
Q Consensus 168 d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~ 247 (634)
+.++..++++|++.|+...++.+...|.|++.+|.+.+|+||.||..|+.+++|+|++. .+++.+.+|..|+|||+-|.
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~-~kv~~~~kDRw~rtPlDdA~ 581 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNA-CKVDPDPKDRWGRTPLDDAK 581 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHH-HcCCCChhhccCCCcchHhH
Confidence 34567889999999999999999999999999999999999999999999999999998 45899999999999999999
Q ss_pred hcCcHHHHHHHHHHHH
Q 006702 248 DKNHRQVAFFLGNARR 263 (634)
Q Consensus 248 ~~~~~~i~~~L~~~~~ 263 (634)
.-+|.+++++|.+...
T Consensus 582 ~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 582 HFKHKEVVKLLEEAQY 597 (622)
T ss_pred hcCcHHHHHHHHHHhc
Confidence 9999999999987654
No 101
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.64 E-value=9.5e-08 Score=98.77 Aligned_cols=92 Identities=24% Similarity=0.301 Sum_probs=85.0
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCC-CCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPD-GLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSA 112 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~ 112 (634)
+......||..++.|+++..-.||. .|+++|..+ +.|.||||.||+.|+.--+++|+-+|||+++.|.+|.||+.+|-
T Consensus 130 ~~~LsrQLhasvRt~nlet~LRll~-lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR 208 (669)
T KOG0818|consen 130 AKDLSKQLHSSVRTGNLETCLRLLS-LGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYAR 208 (669)
T ss_pred HHHHHHHHHHHhhcccHHHHHHHHH-cccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHH
Confidence 3445677999999999999999998 899999886 56999999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHHhc
Q 006702 113 VRGAIQVAELLLRE 126 (634)
Q Consensus 113 ~~g~~~iv~~Ll~~ 126 (634)
..||-++.+.|++.
T Consensus 209 ~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 209 QGGHHELAERLVEI 222 (669)
T ss_pred hcCchHHHHHHHHH
Confidence 99999999999874
No 102
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.59 E-value=4.5e-08 Score=100.74 Aligned_cols=89 Identities=22% Similarity=0.302 Sum_probs=49.1
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCC
Q 006702 104 GQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGF 183 (634)
Q Consensus 104 g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~ 183 (634)
+..++++|++.|++..++.+.-.|.|++.+|.+.+|+||.||..|+.+++++|++..+++++.+|..|+|||.-|..-++
T Consensus 506 ~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h 585 (622)
T KOG0506|consen 506 TVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKH 585 (622)
T ss_pred chhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCc
Confidence 34455555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHhh
Q 006702 184 ADCIRLLLF 192 (634)
Q Consensus 184 ~~~v~~Ll~ 192 (634)
.+++++|-+
T Consensus 586 ~~v~k~L~~ 594 (622)
T KOG0506|consen 586 KEVVKLLEE 594 (622)
T ss_pred HHHHHHHHH
Confidence 555555543
No 103
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.58 E-value=1.5e-07 Score=98.42 Aligned_cols=119 Identities=27% Similarity=0.296 Sum_probs=100.8
Q ss_pred HHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHcCCHH
Q 006702 141 THVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAY--RGRQDKEGCTPLHWAAIRGNLE 218 (634)
Q Consensus 141 L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~--~~~~d~~g~TpLh~A~~~g~~~ 218 (634)
+..|+..+..--+...-.. |.++-.++.+..+.||+|+..|+-++|++++++|.. ++..|..|.|+||-|+..++..
T Consensus 870 il~av~~~D~~klqE~h~~-gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~ 948 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLN-GGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRA 948 (1004)
T ss_pred HHHHHHhccHHHHHHHHhc-CCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchH
Confidence 4455555554434444333 788888999999999999999999999999999853 4677889999999999999999
Q ss_pred HHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHH
Q 006702 219 ACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNAR 262 (634)
Q Consensus 219 iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~ 262 (634)
++.+|++.| +.+..+|..|+||-..|-+.+..+++.+|++..
T Consensus 949 vc~~lvdag--asl~ktd~kg~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 949 VCQLLVDAG--ASLRKTDSKGKTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred HHHHHHhcc--hhheecccCCCChHHHHHhcCCchHHHHHhhhh
Confidence 999999999 678899999999999999999999999997643
No 104
>PF13606 Ank_3: Ankyrin repeat
Probab=98.55 E-value=8.5e-08 Score=62.19 Aligned_cols=28 Identities=43% Similarity=0.685 Sum_probs=13.8
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCC
Q 006702 71 GYYALQWAALNNRTAAAQYIIEHGGDVN 98 (634)
Q Consensus 71 g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n 98 (634)
|+||||+||..|+.|++++||++|+|+|
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 4445555555555555555555544444
No 105
>PF13606 Ank_3: Ankyrin repeat
Probab=98.54 E-value=1e-07 Score=61.85 Aligned_cols=30 Identities=47% Similarity=0.736 Sum_probs=27.5
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCCCCCc
Q 006702 103 TGQTALHWSAVRGAIQVAELLLREGARVNA 132 (634)
Q Consensus 103 ~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~ 132 (634)
+|+||||+||+.|+.++|++|+++|+|++.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 489999999999999999999999999874
No 106
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.48 E-value=6.4e-06 Score=91.59 Aligned_cols=127 Identities=18% Similarity=0.213 Sum_probs=104.0
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccC---CCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEG---CSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALH 109 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~---~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh 109 (634)
+..........|+..||...|+..++... .++|..|.-|.++|+.|+.+.+.+++++|++++.++ ..+|.
T Consensus 21 ~l~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL 93 (822)
T KOG3609|consen 21 DLNEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALL 93 (822)
T ss_pred ccchhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHH
Confidence 34445667889999999999999998543 468889999999999999999999999999986655 35899
Q ss_pred HHHHhCCHHHHHHHHhcCCCC----------CccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCC
Q 006702 110 WSAVRGAIQVAELLLREGARV----------NAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVP 167 (634)
Q Consensus 110 ~A~~~g~~~iv~~Ll~~gad~----------~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~ 167 (634)
.|+..|..++|+.++.+-.+. ...-..+.||+.+||..++.|+++.|+.+ |+.+..+
T Consensus 94 ~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~k-g~~i~~P 160 (822)
T KOG3609|consen 94 LAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTR-GHCIPIP 160 (822)
T ss_pred HHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHc-CCCCCCC
Confidence 999999999999999874332 12234567999999999999999999988 7666543
No 107
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.47 E-value=2.2e-07 Score=61.93 Aligned_cols=31 Identities=48% Similarity=0.823 Sum_probs=15.5
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhcCCCCCccc
Q 006702 104 GQTALHWSAVRGAIQVAELLLREGARVNAAD 134 (634)
Q Consensus 104 g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d 134 (634)
|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 4455555555555555555555555554443
No 108
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.45 E-value=2.6e-07 Score=61.57 Aligned_cols=33 Identities=30% Similarity=0.538 Sum_probs=30.8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q 006702 70 LGYYALQWAALNNRTAAAQYIIEHGGDVNAADH 102 (634)
Q Consensus 70 ~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~ 102 (634)
+|.||||+|+..|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 489999999999999999999999999998864
No 109
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.40 E-value=1.1e-06 Score=92.79 Aligned_cols=96 Identities=33% Similarity=0.402 Sum_probs=70.2
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccCC--CCc--CCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEGC--SVS--EPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTAL 108 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~--~~~--~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpL 108 (634)
.++.....|..|+...|+..+..||. +|. .+| ..+.+|+|+||.||..|+..+.++|+-+|+|+-.+|..|.|+|
T Consensus 620 te~~lgqqLl~A~~~~Dl~t~~lLLA-hg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l 698 (749)
T KOG0705|consen 620 TEEPLGQQLLRAVAAEDLQTAILLLA-HGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTAL 698 (749)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHh-ccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhh
Confidence 35556666777887778877777777 443 222 2355677888888888888888888888888888888888888
Q ss_pred HHHHHhCCHHHHHHHHhcCCC
Q 006702 109 HWSAVRGAIQVAELLLREGAR 129 (634)
Q Consensus 109 h~A~~~g~~~iv~~Ll~~gad 129 (634)
.+|-+.|.-+++..|+++|+.
T Consensus 699 ~yar~a~sqec~d~llq~gcp 719 (749)
T KOG0705|consen 699 FYARQAGSQECIDVLLQYGCP 719 (749)
T ss_pred hhHhhcccHHHHHHHHHcCCC
Confidence 888888888888888887764
No 110
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.26 E-value=2.1e-06 Score=90.39 Aligned_cols=86 Identities=22% Similarity=0.260 Sum_probs=44.5
Q ss_pred HHHHHHHcCCHHHHHHHHhc-cCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHH
Q 006702 40 DVYTAAAYGDLEKLQRLVEC-EGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQ 118 (634)
Q Consensus 40 ~L~~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~ 118 (634)
++|.++...+.+.+..++.. ....++..|..|.||||.|+..|+.+.++.|+..|+++..+|..|++|||.|+..|+.+
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q 102 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ 102 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence 35555555555544443331 12234455555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHh
Q 006702 119 VAELLLR 125 (634)
Q Consensus 119 iv~~Ll~ 125 (634)
++..++.
T Consensus 103 ~i~~vlr 109 (560)
T KOG0522|consen 103 IITEVLR 109 (560)
T ss_pred HHHHHHH
Confidence 5544443
No 111
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.24 E-value=2.4e-06 Score=89.96 Aligned_cols=87 Identities=30% Similarity=0.337 Sum_probs=64.1
Q ss_pred HHHHHHHhCCHHHHHHH-HHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 006702 140 TTHVAAQYGQTAFLYHI-VSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLE 218 (634)
Q Consensus 140 ~L~~Aa~~g~~~~v~~L-l~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~ 218 (634)
|+|.++.....+-+..+ ..+....++.+|..|+||||+|+..|+.+.++.|+..|+++..+|++|++|||-|+..|+.+
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q 102 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ 102 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence 36666666555444332 22234567778888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHc
Q 006702 219 ACTVLVQA 226 (634)
Q Consensus 219 iv~~Ll~~ 226 (634)
++..++.+
T Consensus 103 ~i~~vlr~ 110 (560)
T KOG0522|consen 103 IITEVLRH 110 (560)
T ss_pred HHHHHHHH
Confidence 77777765
No 112
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.15 E-value=5.7e-06 Score=87.46 Aligned_cols=61 Identities=36% Similarity=0.466 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 006702 168 DNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGK 228 (634)
Q Consensus 168 d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~ 228 (634)
+.+|+|+||+||..|+..+.++|+-+|+|+..+|.+|+|+|.||-..|..|++..|+++|.
T Consensus 658 ~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gc 718 (749)
T KOG0705|consen 658 EGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGC 718 (749)
T ss_pred CCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCC
Confidence 3445555555555555555555555555555555555555555555555555555555553
No 113
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.04 E-value=1.5e-05 Score=80.33 Aligned_cols=75 Identities=23% Similarity=0.403 Sum_probs=62.4
Q ss_pred hhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q 006702 38 RNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVR 114 (634)
Q Consensus 38 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~ 114 (634)
.-.|+.|++.||.+.|++|++ .|.++|..|....+||.+|+..||.++||+|+++||--+.-..+|.-. |+++.+
T Consensus 37 f~elceacR~GD~d~v~~LVe-tgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC-~YgaLn 111 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVE-TGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC-HYGALN 111 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHH-hCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh-hhhhhh
Confidence 567899999999999999999 899999999999999999999999999999999998655444456555 444443
No 114
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.00 E-value=1e-05 Score=91.91 Aligned_cols=129 Identities=23% Similarity=0.320 Sum_probs=79.7
Q ss_pred cccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHH
Q 006702 133 ADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAA 212 (634)
Q Consensus 133 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~ 212 (634)
....|.+.+|+++..+..-++..+++-.+......|.+|...+|.++..|..-.+....-.|..++.+|..|+||||||+
T Consensus 570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa 649 (975)
T KOG0520|consen 570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAA 649 (975)
T ss_pred CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHh
Confidence 34456666666666666666666665434444455566666666644444333333334456666677777777777777
Q ss_pred HcCCHHHHHHHHHcCCCC----CccccCCCCCCHHHHHHhcCcHHHHHHHHHH
Q 006702 213 IRGNLEACTVLVQAGKKE----DLMVTDNTGLTPAQLASDKNHRQVAFFLGNA 261 (634)
Q Consensus 213 ~~g~~~iv~~Ll~~g~~~----d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~ 261 (634)
.+|+..++..|++.|+.. |....+..|.|+-.+|..+|+..+.-+|.+.
T Consensus 650 ~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 650 FRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred hcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 777777777776555332 3334455688888888888888888777543
No 115
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.97 E-value=3.4e-05 Score=85.92 Aligned_cols=122 Identities=18% Similarity=0.145 Sum_probs=90.7
Q ss_pred chHHHHHHHcCCHHHHHHHHhcC----CCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHh
Q 006702 72 YYALQWAALNNRTAAAQYIIEHG----GDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQY 147 (634)
Q Consensus 72 ~t~Lh~Aa~~g~~~~v~~Ll~~g----ad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~ 147 (634)
.--...|+.+|+...|+..++.. .++|.+|.-|+++|+.|+.+.+.+++++|++++... ..+|.+|+..
T Consensus 26 e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~ 98 (822)
T KOG3609|consen 26 EKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAV 98 (822)
T ss_pred hHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHH
Confidence 34566789999999999888753 357778888999999999999999999999987654 4589999999
Q ss_pred CCHHHHHHHHHccCCCC---------CCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCC
Q 006702 148 GQTAFLYHIVSKWNADP---------DVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQ 200 (634)
Q Consensus 148 g~~~~v~~Ll~~~~~~~---------~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~ 200 (634)
|..+.++.++....... ...-..+-|||.+||..++.|+++.|+.+|+.+...
T Consensus 99 ~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P 160 (822)
T KOG3609|consen 99 GSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP 160 (822)
T ss_pred HHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence 99999998887622110 011223557777777777777777777777766554
No 116
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.91 E-value=9e-06 Score=92.94 Aligned_cols=84 Identities=36% Similarity=0.470 Sum_probs=52.3
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcC
Q 006702 103 TGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKG 182 (634)
Q Consensus 103 ~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g 182 (634)
.|.|+||.|+..|...++++|++.|++++.+|..|.+|+|.+...|+...+..|+++ +++.+..|.+|.+||..|....
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~-~a~~~a~~~~~~~~l~~a~~~~ 733 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKR-GADPNAFDPDGKLPLDIAMEAA 733 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccc-cccccccCccCcchhhHHhhhc
Confidence 456666666666666666666666666666666666666666666666666655554 6666666666666666665554
Q ss_pred CHHHH
Q 006702 183 FADCI 187 (634)
Q Consensus 183 ~~~~v 187 (634)
+.+.+
T Consensus 734 ~~d~~ 738 (785)
T KOG0521|consen 734 NADIV 738 (785)
T ss_pred cccHH
Confidence 44433
No 117
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.89 E-value=4.2e-05 Score=87.04 Aligned_cols=129 Identities=22% Similarity=0.237 Sum_probs=106.2
Q ss_pred CCCCCCCCCcHHHHHHHhCCHHHHHHHHhc-CCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHH
Q 006702 97 VNAADHTGQTALHWSAVRGAIQVAELLLRE-GARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPL 175 (634)
Q Consensus 97 ~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~-gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L 175 (634)
.......|.|.+|+++..+..-+++.+++- |......|.+|...+|++ ..++.+...+++.-.+..++.+|..|+|||
T Consensus 567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfc-a~lg~ewA~ll~~~~~~ai~i~D~~G~tpL 645 (975)
T KOG0520|consen 567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFC-AALGYEWAFLPISADGVAIDIRDRNGWTPL 645 (975)
T ss_pred cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHh-hhcCCceeEEEEeecccccccccCCCCccc
Confidence 444456799999999999999999999986 666677788888889984 455556665666666899999999999999
Q ss_pred HHHHhcCCHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 006702 176 HWAAYKGFADCIRLLLFLDAYRG------RQDKEGCTPLHWAAIRGNLEACTVLVQA 226 (634)
Q Consensus 176 h~A~~~g~~~~v~~Ll~~ga~~~------~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 226 (634)
|||+..|+..++..|++.|++.. ..+..|.|+--.|..+|+..+.-+|-++
T Consensus 646 ~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 646 HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 99999999999999998887653 3455789999999999999888887765
No 118
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.87 E-value=9.7e-06 Score=92.68 Aligned_cols=91 Identities=29% Similarity=0.331 Sum_probs=82.2
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Q 006702 168 DNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLAS 247 (634)
Q Consensus 168 d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~ 247 (634)
-..|.|+||.|+..+..-++++|++.|+++|..|..|+||||.+...|+...+..|+++| ++.++.|.+|++|+++|.
T Consensus 653 ~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~--a~~~a~~~~~~~~l~~a~ 730 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRG--ADPNAFDPDGKLPLDIAM 730 (785)
T ss_pred hhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhcccc--ccccccCccCcchhhHHh
Confidence 346789999999999999999999999999999999999999999999999999999998 678889999999999998
Q ss_pred hcCcHHHHHHHHH
Q 006702 248 DKNHRQVAFFLGN 260 (634)
Q Consensus 248 ~~~~~~i~~~L~~ 260 (634)
+..+.+++-++.-
T Consensus 731 ~~~~~d~~~l~~l 743 (785)
T KOG0521|consen 731 EAANADIVLLLRL 743 (785)
T ss_pred hhccccHHHHHhh
Confidence 8877777766543
No 119
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.84 E-value=3.6e-05 Score=70.87 Aligned_cols=65 Identities=31% Similarity=0.438 Sum_probs=36.3
Q ss_pred CCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcC-CCCCccccCCChHHHHHHHhCCHHHHHHHHHc
Q 006702 95 GDVNAADHTGQTALHWSAVRGAIQVAELLLREG-ARVNAADMYGYQTTHVAAQYGQTAFLYHIVSK 159 (634)
Q Consensus 95 ad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~g-ad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~ 159 (634)
.++|.+|..|+|||+.|+..|+.+.+.+|+.+| +++...|..|.+++.+|-..|..+++..|.+.
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 345555555555555555555555555555555 55555555555555555555555555555443
No 120
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.84 E-value=3.9e-05 Score=77.48 Aligned_cols=76 Identities=26% Similarity=0.339 Sum_probs=64.1
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhC
Q 006702 72 YYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYG 148 (634)
Q Consensus 72 ~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g 148 (634)
+--|..||+.|+.+.|++|++.|.++|..|.....||.+|+..||.++|++|+++||-...-..+|... |+++.+.
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC-~YgaLnd 112 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC-HYGALND 112 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh-hhhhhhH
Confidence 446899999999999999999999999999999999999999999999999999999665444555544 4444443
No 121
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.73 E-value=7.6e-05 Score=68.79 Aligned_cols=70 Identities=21% Similarity=0.344 Sum_probs=64.7
Q ss_pred CCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCC
Q 006702 61 GCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHG-GDVNAADHTGQTALHWSAVRGAIQVAELLLREGARV 130 (634)
Q Consensus 61 ~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g-ad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~ 130 (634)
+.++|.+|..|+|+|+.|+..|..+.+.||+++| +++...|..|.+++.+|-+.|..++++.|.+.-.+-
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et 72 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET 72 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence 3578999999999999999999999999999999 899999999999999999999999999999874443
No 122
>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]
Probab=96.71 E-value=0.014 Score=60.22 Aligned_cols=151 Identities=20% Similarity=0.243 Sum_probs=95.7
Q ss_pred cccccccccccccCCCCCCCCcchhhhhccCCcCccccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 006702 374 NWSQLCATCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWDFFLFLVLEVSAMLVTGAVTVIRVFTDPVAPSS 453 (634)
Q Consensus 374 ~~~~~C~~C~~~kP~Rs~HC~~C~~CV~rfDHHCpwv~ncIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (634)
...+.|.+|..-....-|||..-++||-+--| |=.-.|++++.+..+..++.....+.........+..
T Consensus 121 ~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~-----------r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (309)
T COG5273 121 PRSHHCSICNRCVLKFDHHCPWINNCVGFRNY-----------RFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDTSL 189 (309)
T ss_pred CCCccchhhcchhhccCccCcccccccCcchH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCChHH
Confidence 34789999999999999999999999998766 6677899999877777766666666666654444444
Q ss_pred chhhhhhh---ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhh---h--hcCCCCCccCCCCHh
Q 006702 454 FGAWMSYA---STHHIGALSFLIADFSLFFGVAVLTAVQASQISRNITTNEMANALRYN---Y--LRGAGGRFRNPYDHG 525 (634)
Q Consensus 454 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~n~TT~E~~~~~r~~---y--~~~~~~~~~npyd~G 525 (634)
....+-.. .....+++..+++....+.++..++..+.+.+.++.++-|.....|+. + ..+ ......|++.|
T Consensus 190 ~~~~li~~~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~ 268 (309)
T COG5273 190 AICFLIFGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFFPLCRESNLPFTNIFD-SSEGALPLDLG 268 (309)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccceecccccchhccCCcCceeccC-CCccccccccC
Confidence 31111110 000011111112222233445567888999999999999976655554 1 111 11245677777
Q ss_pred HHhHHHHhccc
Q 006702 526 CKRNCSDFLIN 536 (634)
Q Consensus 526 ~~~N~~~f~~~ 536 (634)
.-+|+..++..
T Consensus 269 ~~~~~~~i~~~ 279 (309)
T COG5273 269 IGQNLSTIKGS 279 (309)
T ss_pred ccccceeecCC
Confidence 77777766643
No 123
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.24 E-value=0.0047 Score=65.08 Aligned_cols=63 Identities=24% Similarity=0.252 Sum_probs=44.6
Q ss_pred CHHHHHHHHhcCCCCCC------CCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHH
Q 006702 83 RTAAAQYIIEHGGDVNA------ADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAA 145 (634)
Q Consensus 83 ~~~~v~~Ll~~gad~n~------~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa 145 (634)
-.+.+++|.+++.+.|. .+..-.|+||+|+..|..++|.+||+.|+|+..+|..|.||..+++
T Consensus 403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 35667777777766543 2233567778877777777777777777777777777777777766
No 124
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.22 E-value=0.008 Score=37.01 Aligned_cols=26 Identities=46% Similarity=0.759 Sum_probs=12.8
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhcCCC
Q 006702 104 GQTALHWSAVRGAIQVAELLLREGAR 129 (634)
Q Consensus 104 g~tpLh~A~~~g~~~iv~~Ll~~gad 129 (634)
|.||+|+|+..++.++++.|++.|.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 34455555555555555555554443
No 125
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.17 E-value=0.0085 Score=36.88 Aligned_cols=29 Identities=28% Similarity=0.440 Sum_probs=24.9
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCC
Q 006702 70 LGYYALQWAALNNRTAAAQYIIEHGGDVN 98 (634)
Q Consensus 70 ~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n 98 (634)
.|.||+|+|+..++.++++.|++.+.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 36789999999999999999999887664
No 126
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.34 E-value=0.028 Score=59.51 Aligned_cols=71 Identities=24% Similarity=0.251 Sum_probs=54.3
Q ss_pred HHHHHHcCC-HHHHHHHHhccCCCCcC------CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 006702 41 VYTAAAYGD-LEKLQRLVECEGCSVSE------PDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSA 112 (634)
Q Consensus 41 L~~Aa~~g~-~~~v~~Ll~~~~~~~~~------~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~ 112 (634)
+..-.+.+. .+.+++|.+ ++++.|. .+..--|+||+|+..|..++|.+||+.|+|+..+|..|.||...+.
T Consensus 394 i~s~lkk~~~p~~ie~lke-n~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 394 IISRLKKKPEPDSIEALKE-NLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred HHHHHhccCchhHHHHHHh-cCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 333334443 556666666 5555442 2344568999999999999999999999999999999999999887
No 127
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=94.26 E-value=0.55 Score=43.87 Aligned_cols=44 Identities=18% Similarity=0.037 Sum_probs=27.4
Q ss_pred HHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 006702 175 LHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLV 224 (634)
Q Consensus 175 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll 224 (634)
|.+|+.+|....+...+++|.+++. ++|-.|++.++..|+.+++
T Consensus 147 l~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhh
Confidence 5566666666666666666665543 5666666666666666654
No 128
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=93.78 E-value=0.27 Score=47.20 Aligned_cols=114 Identities=17% Similarity=0.184 Sum_probs=82.7
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcC----CCCCCCCCCCCcHHHHHHH--
Q 006702 40 DVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHG----GDVNAADHTGQTALHWSAV-- 113 (634)
Q Consensus 40 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g----ad~n~~~~~g~tpLh~A~~-- 113 (634)
.|..|+..-+++.+..++... . .-.++|-+|..++..+++-+|+.+- .|+-.. ..+.--+-++..
T Consensus 156 sledAV~AsN~~~i~~~VtdK------k--dA~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~-~~~~ydieY~LS~h 226 (284)
T PF06128_consen 156 SLEDAVKASNYEEISNLVTDK------K--DAHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASM-EKELYDIEYLLSEH 226 (284)
T ss_pred cHHHHHhhcCHHHHHHHhcch------H--HHHHHHHHHhcccHHHHHHHHHhhcceecchhhhc-CcchhhHHHHHhhc
Confidence 377899999999998888722 2 2357888999999999999999752 122111 112234445443
Q ss_pred hCCHHHHHHHHhcC-CCCCc---cccCCChHHHHHHHhCCHHHHHHHHHccCCC
Q 006702 114 RGAIQVAELLLREG-ARVNA---ADMYGYQTTHVAAQYGQTAFLYHIVSKWNAD 163 (634)
Q Consensus 114 ~g~~~iv~~Ll~~g-ad~~~---~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~ 163 (634)
+.+..++++++++| +++|. +-..|.|.|.-|..+++.+++..||.. |+-
T Consensus 227 ~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~-GA~ 279 (284)
T PF06128_consen 227 SASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKY-GAI 279 (284)
T ss_pred CCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHc-Ccc
Confidence 34678999999998 56654 457899999999999999999999976 663
No 129
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=93.54 E-value=0.54 Score=45.17 Aligned_cols=119 Identities=18% Similarity=0.097 Sum_probs=79.0
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHH
Q 006702 74 ALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFL 153 (634)
Q Consensus 74 ~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v 153 (634)
.|--|+...+++.+.-++...- .-.++|-+|+.++..+++.+|+.+= .....| .|.......-+
T Consensus 156 sledAV~AsN~~~i~~~VtdKk-------dA~~Am~~si~~~K~dva~~lls~f-~ft~~d--------v~~~~~~~ydi 219 (284)
T PF06128_consen 156 SLEDAVKASNYEEISNLVTDKK-------DAHQAMWLSIGNAKEDVALYLLSKF-NFTKQD--------VASMEKELYDI 219 (284)
T ss_pred cHHHHHhhcCHHHHHHHhcchH-------HHHHHHHHHhcccHHHHHHHHHhhc-ceecch--------hhhcCcchhhH
Confidence 4778898889988887775321 2357889999999999999998751 111122 22222234456
Q ss_pred HHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcC-CCCCC---CCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 006702 154 YHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLD-AYRGR---QDKEGCTPLHWAAIRGNLEACTVLVQAGK 228 (634)
Q Consensus 154 ~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-a~~~~---~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~ 228 (634)
+|+|+..++ +..++++.+++| +++|. +-+.|.|-|.-|++.++.+++..||++|+
T Consensus 220 eY~LS~h~a--------------------~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 220 EYLLSEHSA--------------------SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred HHHHhhcCC--------------------cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 666665333 345667777776 45554 34567888888888888888888888885
No 130
>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding
Probab=91.68 E-value=0.69 Score=43.46 Aligned_cols=62 Identities=19% Similarity=0.365 Sum_probs=47.0
Q ss_pred cccccccccccccCCCCCCCCcchhhhhccCCcCccccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 006702 374 NWSQLCATCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWDFFLFLVLEVSAMLVTGAVTVIRVFT 446 (634)
Q Consensus 374 ~~~~~C~~C~~~kP~Rs~HC~~C~~CV~rfDHHCpwv~ncIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~~ 446 (634)
...+.|..|+.-...+-|||..-+.||.+--| +-+-.|+++.....+..++.....+.....
T Consensus 60 ~Rs~HC~~C~~CV~~~DHHC~w~~~cIG~~N~-----------~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~ 121 (174)
T PF01529_consen 60 PRSHHCRVCNRCVLRFDHHCPWLGNCIGRRNH-----------RYFLLFLLYLCLYCLYFFILSLYYLVRYIP 121 (174)
T ss_pred CcceeccccccccccccccchhhccccccccH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34689999999999999999999999998776 556688888876666665555554444333
No 131
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=88.95 E-value=2.5 Score=39.64 Aligned_cols=139 Identities=15% Similarity=0.126 Sum_probs=93.7
Q ss_pred hhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCH
Q 006702 38 RNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAI 117 (634)
Q Consensus 38 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~ 117 (634)
.-.|..|++.+-+.++++.-+.-. ..-...++....||+..+.|+|+|+-++ +.. .+-.+-+-.|....+.
T Consensus 47 ~CLl~HAVk~nmL~ILqkyke~L~----~~~~~~q~LFElAC~~qkydiV~WI~qn---L~i--~~~~~iFdIA~~~kDl 117 (192)
T PF03158_consen 47 WCLLYHAVKYNMLSILQKYKEDLE----NERYLNQELFELACEEQKYDIVKWIGQN---LHI--YNPEDIFDIAFAKKDL 117 (192)
T ss_pred HHHHHHHHHcCcHHHHHHHHHHhh----cchhHHHHHHHHHHHHccccHHHHHhhc---cCC--CCchhhhhhhhhccch
Confidence 445778999999999999877211 1123567899999999999999999443 211 1223456688888887
Q ss_pred HHH----HHHHhcCCCCCcccc--CCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHh
Q 006702 118 QVA----ELLLREGARVNAADM--YGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLL 191 (634)
Q Consensus 118 ~iv----~~Ll~~gad~~~~d~--~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 191 (634)
++. +++.++...-...|. --..-|..|+..|-...+...++. |.+++. ++|..|+..++-.++.+++
T Consensus 118 sLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlky-gg~~~~------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 118 SLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKY-GGNVDI------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred hHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHc-CCcccH------HHHHHHHHhhHHHHHHHhh
Confidence 763 233343221101110 001346789999999999888877 666554 7999999999999998876
Q ss_pred h
Q 006702 192 F 192 (634)
Q Consensus 192 ~ 192 (634)
.
T Consensus 191 ~ 191 (192)
T PF03158_consen 191 R 191 (192)
T ss_pred c
Confidence 4
No 132
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=88.47 E-value=1 Score=35.99 Aligned_cols=46 Identities=9% Similarity=0.273 Sum_probs=21.4
Q ss_pred HHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHc
Q 006702 107 ALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSK 159 (634)
Q Consensus 107 pLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~ 159 (634)
.+..|+.+|+.+|++.+++.+ .++ ...+..|+...+.+++++|+++
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 344555555555555554433 111 2345555555555555555544
No 133
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=84.29 E-value=1.9 Score=34.44 Aligned_cols=46 Identities=11% Similarity=0.276 Sum_probs=22.2
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhc
Q 006702 74 ALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLRE 126 (634)
Q Consensus 74 ~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~ 126 (634)
.+..|+..|+.|+++.+++.+ .++ ...+..|+...+.+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 445555555555555555432 111 2345555555555555555543
No 134
>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]
Probab=79.83 E-value=7 Score=40.19 Aligned_cols=63 Identities=21% Similarity=0.309 Sum_probs=43.6
Q ss_pred cccccccccccccccCCCCCCCCcchhhhhccCCcCccccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006702 372 AGNWSQLCATCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWDFFLFLVLEVSAMLVTGAVTVIRVF 445 (634)
Q Consensus 372 ~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~rfDHHCpwv~ncIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~ 445 (634)
+.+....|..|..---..-|||..-++||.-.++ +=.-.|+.+.....+..++.....+...+
T Consensus 119 KPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~Ny-----------KfF~lfl~y~~l~~~~~lv~~~~~~~~~~ 181 (307)
T KOG1315|consen 119 KPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNY-----------KFFLLFLFYTNLYSIYVLVTTLIGFTKYF 181 (307)
T ss_pred cCCccccchhhhhhhhccccCCcceeceecccch-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445678888888888889999999999987554 66667887777666555444444444333
No 135
>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]
Probab=76.81 E-value=6.6 Score=40.52 Aligned_cols=42 Identities=21% Similarity=0.491 Sum_probs=34.7
Q ss_pred CCCCCCcchhhhhccCCcCccccccccCCC-----------hHHHHHHHHHHH
Q 006702 389 RAKHCSTCDRCVEQFDHHCPWVSNCIGKKN-----------KWDFFLFLVLEV 430 (634)
Q Consensus 389 Rs~HC~~C~~CV~rfDHHCpwv~ncIG~~N-----------~r~F~~fl~~~~ 430 (634)
+-|+|..|+..+...-|||+.=++||-+.- +|.+-.|+.+.+
T Consensus 112 ~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~ 164 (299)
T KOG1311|consen 112 EWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLF 164 (299)
T ss_pred ceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHH
Confidence 588999999999999999999999998864 477788885544
No 136
>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]
Probab=72.32 E-value=24 Score=36.50 Aligned_cols=93 Identities=20% Similarity=0.276 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCccccCCCCCCCCCCchhhhhhhccCcchhcccccccccccccccCCCCCCCCcc
Q 006702 317 LLAWSGVFLATGGLVLFYRCSRKDPGYIRMNVHDPQNMKDDEPLLKIEMNNPALLAGNWSQLCATCKIVRPLRAKHCSTC 396 (634)
Q Consensus 317 ~~~w~~i~l~~~~l~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C 396 (634)
++.|...++.-...-++.--=+.-||+-|.+..+..-.. ...+.+ ..+...+..|.+|..-.-.--|||+.-
T Consensus 54 f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~~D~~~lq---fCk~Cq-----gYKapRSHHCrkCnrCvmkMDHHCPWi 125 (414)
T KOG1314|consen 54 FLLWTSMILYNYFNAIFTGPGFVPLGWKPENPKDEMFLQ---FCKKCQ-----GYKAPRSHHCRKCNRCVMKMDHHCPWI 125 (414)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCChhHHHHH---HHhhcc-----CcCCCccccchHHHHHHHhhccCCcch
Confidence 445555544444444444445677888886665532110 011110 001112678999998888889999999
Q ss_pred hhhhhccCCcCccccccccCCChHHHHHHHHH
Q 006702 397 DRCVEQFDHHCPWVSNCIGKKNKWDFFLFLVL 428 (634)
Q Consensus 397 ~~CV~rfDHHCpwv~ncIG~~N~r~F~~fl~~ 428 (634)
+.||---.| --.-+|++|...
T Consensus 126 nnCVG~aNh-----------~~F~~FLlf~iv 146 (414)
T KOG1314|consen 126 NNCVGWANH-----------AYFLRFLLFSIV 146 (414)
T ss_pred hhccccccc-----------HHHHHHHHHHHH
Confidence 999986555 335678888876
No 137
>PF13240 zinc_ribbon_2: zinc-ribbon domain
Probab=72.26 E-value=1.8 Score=26.00 Aligned_cols=21 Identities=29% Similarity=0.668 Sum_probs=18.0
Q ss_pred cccccccccCCCCCCCCcchh
Q 006702 378 LCATCKIVRPLRAKHCSTCDR 398 (634)
Q Consensus 378 ~C~~C~~~kP~Rs~HC~~C~~ 398 (634)
+|+.|...-++.++.|..|+.
T Consensus 1 ~Cp~CG~~~~~~~~fC~~CG~ 21 (23)
T PF13240_consen 1 YCPNCGAEIEDDAKFCPNCGT 21 (23)
T ss_pred CCcccCCCCCCcCcchhhhCC
Confidence 588999999999999998874
No 138
>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]
Probab=68.55 E-value=33 Score=34.25 Aligned_cols=54 Identities=22% Similarity=0.463 Sum_probs=44.1
Q ss_pred cccccccccccCCCCCCCCcchhhhhccCCcCccccccccCCChHHHHHHHHHHHHHHHHHHHHH
Q 006702 376 SQLCATCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWDFFLFLVLEVSAMLVTGAVT 440 (634)
Q Consensus 376 ~~~C~~C~~~kP~Rs~HC~~C~~CV~rfDHHCpwv~ncIG~~N~r~F~~fl~~~~~~~~~~~~~~ 440 (634)
..-|.+|..-.-.--|||..-|+||--..| +=.-.|+.++...+.++.+.....
T Consensus 116 THHCsiC~kCVL~MDHHCPwinnCVG~~NH-----------ryFFlFl~~ltlat~~~~i~~~~~ 169 (309)
T KOG1313|consen 116 THHCSICNKCVLKMDHHCPWINNCVGAHNH-----------RYFFLFLFYLTLATSYAAIMCVYT 169 (309)
T ss_pred cchhhHHhhHhhccccCCchhhcccccccc-----------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 577999998888889999999999999988 666789999987777666654433
No 139
>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional
Probab=68.06 E-value=2.5 Score=30.11 Aligned_cols=23 Identities=30% Similarity=0.879 Sum_probs=21.2
Q ss_pred cccccccccccCCCCCCCCcchh
Q 006702 376 SQLCATCKIVRPLRAKHCSTCDR 398 (634)
Q Consensus 376 ~~~C~~C~~~kP~Rs~HC~~C~~ 398 (634)
.++|..|...-|+|+.-|+.|+.
T Consensus 14 k~ICrkC~ARnp~~A~~CRKCg~ 36 (48)
T PRK04136 14 KKICMRCNARNPWRATKCRKCGY 36 (48)
T ss_pred ccchhcccCCCCccccccccCCC
Confidence 57999999999999999998875
No 140
>PF13248 zf-ribbon_3: zinc-ribbon domain
Probab=66.58 E-value=2.9 Score=25.85 Aligned_cols=23 Identities=26% Similarity=0.644 Sum_probs=19.4
Q ss_pred cccccccccccCCCCCCCCcchh
Q 006702 376 SQLCATCKIVRPLRAKHCSTCDR 398 (634)
Q Consensus 376 ~~~C~~C~~~kP~Rs~HC~~C~~ 398 (634)
.+.|+.|....++-++.|+.||.
T Consensus 2 ~~~Cp~Cg~~~~~~~~fC~~CG~ 24 (26)
T PF13248_consen 2 EMFCPNCGAEIDPDAKFCPNCGA 24 (26)
T ss_pred cCCCcccCCcCCcccccChhhCC
Confidence 36799999988999999998874
No 141
>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines. Several members are annotated as putative helicases.
Probab=62.44 E-value=3.9 Score=25.34 Aligned_cols=22 Identities=32% Similarity=0.744 Sum_probs=19.0
Q ss_pred ccccccccccCCCCCCCCcchh
Q 006702 377 QLCATCKIVRPLRAKHCSTCDR 398 (634)
Q Consensus 377 ~~C~~C~~~kP~Rs~HC~~C~~ 398 (634)
+.|+.|....|.-++-|+.||.
T Consensus 1 K~CP~C~~~V~~~~~~Cp~CG~ 22 (26)
T PF10571_consen 1 KTCPECGAEVPESAKFCPHCGY 22 (26)
T ss_pred CcCCCCcCCchhhcCcCCCCCC
Confidence 4599999999999999998874
No 142
>PF07850 Renin_r: Renin receptor-like protein; InterPro: IPR012493 The sequences featured in this family are similar to a region of the human renin receptor (Q8NG15 from SWISSPROT) that bears a putative transmembrane spanning segment []. The renin receptor is involved in intracellular signal transduction by the activation of the ERK1/ERK2 pathway, and it also serves to increase the efficiency of angiotensinogen cleavage by receptor-bound renin, therefore facilitating angiotensin II generation and action on a cell surface []. ; GO: 0004872 receptor activity, 0016021 integral to membrane; PDB: 3LC8_A 3LBS_A.
Probab=49.14 E-value=6 Score=33.16 Aligned_cols=32 Identities=31% Similarity=0.512 Sum_probs=1.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhccCCCc
Q 006702 312 TAGFGLLAWSGVFLATGGLVLFYRCSRKDPGY 343 (634)
Q Consensus 312 ~~~~~~~~w~~i~l~~~~l~~~~~~~~~dPG~ 343 (634)
...|..+.|+.+++++..+..-+..+..|||+
T Consensus 52 pviFnIiLW~~v~l~~all~i~~~m~~mDPGr 83 (98)
T PF07850_consen 52 PVIFNIILWFSVVLALALLAICYAMWNMDPGR 83 (98)
T ss_dssp ------------------------------TT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHheecCCCC
Confidence 34455667777776666665555666899996
No 143
>PTZ00303 phosphatidylinositol kinase; Provisional
Probab=48.75 E-value=7.9 Score=43.74 Aligned_cols=22 Identities=32% Similarity=0.739 Sum_probs=18.5
Q ss_pred ccccccccccC-------CCCCCCCcchh
Q 006702 377 QLCATCKIVRP-------LRAKHCSTCDR 398 (634)
Q Consensus 377 ~~C~~C~~~kP-------~Rs~HC~~C~~ 398 (634)
+.|..|...-. .|-|||+.||+
T Consensus 461 dtC~~C~kkFfSlsK~L~~RKHHCRkCGr 489 (1374)
T PTZ00303 461 DSCPSCGRAFISLSRPLGTRAHHCRSCGI 489 (1374)
T ss_pred CcccCcCCcccccccccccccccccCCcc
Confidence 67999998774 39999999887
No 144
>PF07010 Endomucin: Endomucin; InterPro: IPR010740 This family consists of several mammalian endomucin proteins. Endomucin is an early endothelial-specific antigen that is also expressed on putative hematopoietic progenitor cells.
Probab=46.90 E-value=38 Score=32.75 Aligned_cols=27 Identities=30% Similarity=0.516 Sum_probs=18.2
Q ss_pred HHHHHhhhccCCCccccCCCCCCCCCC
Q 006702 330 LVLFYRCSRKDPGYIRMNVHDPQNMKD 356 (634)
Q Consensus 330 l~~~~~~~~~dPG~~~~~~~~~~~~~~ 356 (634)
+.+|..|+.+|||........++.+++
T Consensus 208 vgLyr~C~k~dPg~p~~g~~qpqsdke 234 (259)
T PF07010_consen 208 VGLYRMCWKTDPGTPENGPDQPQSDKE 234 (259)
T ss_pred HHHHHHhhcCCCCCcccCCCCCCcccc
Confidence 446677899999976655555555443
No 145
>KOG1842 consensus FYVE finger-containing protein [General function prediction only]
Probab=46.75 E-value=6 Score=41.87 Aligned_cols=29 Identities=28% Similarity=0.599 Sum_probs=22.7
Q ss_pred ccccccccccccc--CCCCCCCCcchhhhhc
Q 006702 374 NWSQLCATCKIVR--PLRAKHCSTCDRCVEQ 402 (634)
Q Consensus 374 ~~~~~C~~C~~~k--P~Rs~HC~~C~~CV~r 402 (634)
...++|+.|...= ..|-|||+.||+-+-+
T Consensus 178 s~V~~CP~Ca~~F~l~rRrHHCRLCG~VmC~ 208 (505)
T KOG1842|consen 178 SSVQFCPECANSFGLTRRRHHCRLCGRVMCR 208 (505)
T ss_pred CcccccccccchhhhHHHhhhhhhcchHHHH
Confidence 3468999998654 4589999999996653
No 146
>COG1552 RPL40A Ribosomal protein L40E [Translation, ribosomal structure and biogenesis]
Probab=45.50 E-value=4.7 Score=28.80 Aligned_cols=23 Identities=30% Similarity=0.816 Sum_probs=20.8
Q ss_pred cccccccccccCCCCCCCCcchh
Q 006702 376 SQLCATCKIVRPLRAKHCSTCDR 398 (634)
Q Consensus 376 ~~~C~~C~~~kP~Rs~HC~~C~~ 398 (634)
.++|..|...-|+|+--|+.|+.
T Consensus 14 kkIC~rC~Arnp~~A~kCRkC~~ 36 (50)
T COG1552 14 KKICRRCYARNPPRATKCRKCGY 36 (50)
T ss_pred HHHHHHhcCCCCcchhHHhhccC
Confidence 48999999999999999998864
No 147
>PF12773 DZR: Double zinc ribbon
Probab=43.25 E-value=16 Score=26.25 Aligned_cols=34 Identities=24% Similarity=0.573 Sum_probs=22.4
Q ss_pred cccccccccccC---CCCCCCCcchhhhhccCCcCcc
Q 006702 376 SQLCATCKIVRP---LRAKHCSTCDRCVEQFDHHCPW 409 (634)
Q Consensus 376 ~~~C~~C~~~kP---~Rs~HC~~C~~CV~rfDHHCpw 409 (634)
.++|..|...-+ ...+.|..|+.=+...+.+|++
T Consensus 12 ~~fC~~CG~~l~~~~~~~~~C~~Cg~~~~~~~~fC~~ 48 (50)
T PF12773_consen 12 AKFCPHCGTPLPPPDQSKKICPNCGAENPPNAKFCPN 48 (50)
T ss_pred ccCChhhcCChhhccCCCCCCcCCcCCCcCCcCccCc
Confidence 467777776665 3356677777776666666664
No 148
>PF14015 DUF4231: Protein of unknown function (DUF4231)
Probab=41.05 E-value=2.2e+02 Score=24.11 Aligned_cols=22 Identities=32% Similarity=0.342 Sum_probs=18.3
Q ss_pred HhhcchhHHHHhhhhhhhhcCC
Q 006702 493 ISRNITTNEMANALRYNYLRGA 514 (634)
Q Consensus 493 i~~n~TT~E~~~~~r~~y~~~~ 514 (634)
-.+..+|-|.++..++.|.-+.
T Consensus 78 W~~~r~tae~lk~e~~~~~~~~ 99 (112)
T PF14015_consen 78 WIRYRATAESLKREKWLYLAGA 99 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 4789999999999999887543
No 149
>PHA02680 ORF090 IMV phosphorylated membrane protein; Provisional
Probab=39.79 E-value=1.3e+02 Score=24.50 Aligned_cols=24 Identities=13% Similarity=-0.038 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHhhcchhHHHHhh
Q 006702 482 VAVLTAVQASQISRNITTNEMANA 505 (634)
Q Consensus 482 ~~~l~~~~~~~i~~n~TT~E~~~~ 505 (634)
+.+++++..|.-+++-+++|++|.
T Consensus 60 ~lGilifs~y~~C~~~~~~~r~n~ 83 (91)
T PHA02680 60 LLGLFVFSMYRKCSGSMPYERLNN 83 (91)
T ss_pred HHHHHHHHHhcccCCCceeecccC
Confidence 334667777777778788887664
No 150
>KOG4737 consensus ATPase membrane sector associated protein [Energy production and conversion]
Probab=39.60 E-value=41 Score=33.54 Aligned_cols=36 Identities=22% Similarity=0.408 Sum_probs=29.8
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCc
Q 006702 308 LPKLTAGFGLLAWSGVFLATGGLVLFYRCSRKDPGY 343 (634)
Q Consensus 308 ~~~~~~~~~~~~w~~i~l~~~~l~~~~~~~~~dPG~ 343 (634)
...+...|..+.|+.+++.+..++.-|-....|||+
T Consensus 276 ~sdYpviFni~Lw~mvil~lali~i~y~ia~mDPg~ 311 (326)
T KOG4737|consen 276 SSDYPVIFNIFLWLMVILVLALIYIVYGIASMDPGK 311 (326)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHhhhhccCCCc
Confidence 345566788899999998888888888889999997
No 151
>PRK15103 paraquat-inducible membrane protein A; Provisional
Probab=38.87 E-value=5.4e+02 Score=27.93 Aligned_cols=30 Identities=17% Similarity=0.422 Sum_probs=23.4
Q ss_pred ccccccccccCCCCCCCCcchhhhhccCCc
Q 006702 377 QLCATCKIVRPLRAKHCSTCDRCVEQFDHH 406 (634)
Q Consensus 377 ~~C~~C~~~kP~Rs~HC~~C~~CV~rfDHH 406 (634)
..|+.|...-|....+|..|+.-..+..++
T Consensus 222 ~~C~~Cd~l~~~~~a~CpRC~~~L~~~~~~ 251 (419)
T PRK15103 222 RSCSCCTAILPADQPVCPRCHTKGYVRRRN 251 (419)
T ss_pred CcCCCCCCCCCCCCCCCCCCCCcCcCCCCC
Confidence 459999998887777899888887665543
No 152
>PF01020 Ribosomal_L40e: Ribosomal L40e family; InterPro: IPR001975 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the L40 ribosomal protein from both archaea and eukaryotes. Bovine ribosomal protein L40 has been identified as a secondary RNA binding protein []. L40 is fused to a ubiquitin protein [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005840 ribosome; PDB: 3IZS_p 3IZR_p 2AYJ_A 4A1B_K 4A19_K 4A18_K 4A1D_K.
Probab=37.74 E-value=17 Score=26.53 Aligned_cols=24 Identities=29% Similarity=0.760 Sum_probs=16.6
Q ss_pred cccccccccccCCCCCCCCc--chhh
Q 006702 376 SQLCATCKIVRPLRAKHCST--CDRC 399 (634)
Q Consensus 376 ~~~C~~C~~~kP~Rs~HC~~--C~~C 399 (634)
..+|..|-..-|+|+-.|+. ||.+
T Consensus 17 k~ICrkCyarl~~~A~nCRKkkCGhs 42 (52)
T PF01020_consen 17 KMICRKCYARLPPRATNCRKKKCGHS 42 (52)
T ss_dssp -EEETTT--EE-TTSSS-TSSSCTS-
T ss_pred ceecccccCcCCCCccceecccCCCC
Confidence 57899999999999999998 8765
No 153
>PF00641 zf-RanBP: Zn-finger in Ran binding protein and others; InterPro: IPR001876 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the zinc finger domain found in RanBP2 proteins. Ran is an evolutionary conserved member of the Ras superfamily that regulates all receptor-mediated transport between the nucleus and the cytoplasm. Ran binding protein 2 (RanBP2) is a 358kDa nucleoporin located on the cytoplasmic side of the nuclear pore complex which plays a role in nuclear protein import []. RanBP2 contains multiple zinc fingers which mediate binding to RanGDP []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9G_A 2EBR_A 2WX0_C 2WX1_C 2WWZ_C 3GJ6_B 2LK0_A 2LK1_A 3GJ5_B 3GJ8_B ....
Probab=36.95 E-value=16 Score=23.20 Aligned_cols=20 Identities=25% Similarity=0.911 Sum_probs=15.6
Q ss_pred cccccccccCCCCCCCCcch
Q 006702 378 LCATCKIVRPLRAKHCSTCD 397 (634)
Q Consensus 378 ~C~~C~~~kP~Rs~HC~~C~ 397 (634)
.|..|...-+++..+|..|+
T Consensus 6 ~C~~C~~~N~~~~~~C~~C~ 25 (30)
T PF00641_consen 6 KCPSCTFMNPASRSKCVACG 25 (30)
T ss_dssp EETTTTEEEESSSSB-TTT-
T ss_pred cCCCCcCCchHHhhhhhCcC
Confidence 48889999999999998886
No 154
>PRK02935 hypothetical protein; Provisional
Probab=36.75 E-value=1.9e+02 Score=24.55 Aligned_cols=15 Identities=20% Similarity=0.283 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHhh
Q 006702 288 WCVILLMLVTYMHSV 302 (634)
Q Consensus 288 ~~~i~~~l~~y~~~~ 302 (634)
+.+.+.+++.|+..+
T Consensus 18 ~lvfiG~~vMy~Gif 32 (110)
T PRK02935 18 SLVFIGFIVMYLGIF 32 (110)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444555666533
No 155
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=33.16 E-value=37 Score=37.13 Aligned_cols=162 Identities=15% Similarity=0.174 Sum_probs=90.0
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHH
Q 006702 39 NDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQ 118 (634)
Q Consensus 39 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~ 118 (634)
-.+..|+.+++.+.+..+++.....++.+...|.....+--..|..+++-.+.. |+ .+=+.+|..-|+++
T Consensus 266 ~~fk~av~~~d~~~v~~~i~~~~ll~~i~~~~~~~i~~fL~~~G~~e~AL~~~~---D~-------~~rFeLAl~lg~L~ 335 (443)
T PF04053_consen 266 LEFKTAVLRGDFEEVLRMIAASNLLPNIPKDQGQSIARFLEKKGYPELALQFVT---DP-------DHRFELALQLGNLD 335 (443)
T ss_dssp HHHHHHHHTT-HHH-----HHHHTGGG--HHHHHHHHHHHHHTT-HHHHHHHSS----H-------HHHHHHHHHCT-HH
T ss_pred HHHHHHHHcCChhhhhhhhhhhhhcccCChhHHHHHHHHHHHCCCHHHHHhhcC---Ch-------HHHhHHHHhcCCHH
Confidence 346789999999998888774444445555556677777777777777655442 22 34577888888888
Q ss_pred HHHHHHhcCCCCCccccCCChH-HHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCC
Q 006702 119 VAELLLREGARVNAADMYGYQT-THVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYR 197 (634)
Q Consensus 119 iv~~Ll~~gad~~~~d~~g~t~-L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~ 197 (634)
.+.-+.+.-.+. .-+.- -..|...|+.++++.-+++ .+|- ...+.+....|+.+-++.|.+.-.
T Consensus 336 ~A~~~a~~~~~~-----~~W~~Lg~~AL~~g~~~lAe~c~~k------~~d~--~~L~lLy~~~g~~~~L~kl~~~a~-- 400 (443)
T PF04053_consen 336 IALEIAKELDDP-----EKWKQLGDEALRQGNIELAEECYQK------AKDF--SGLLLLYSSTGDREKLSKLAKIAE-- 400 (443)
T ss_dssp HHHHHCCCCSTH-----HHHHHHHHHHHHTTBHHHHHHHHHH------CT-H--HHHHHHHHHCT-HHHHHHHHHHHH--
T ss_pred HHHHHHHhcCcH-----HHHHHHHHHHHHcCCHHHHHHHHHh------hcCc--cccHHHHHHhCCHHHHHHHHHHHH--
Confidence 887665543211 11222 2456677888888887776 1222 245667777788777777653211
Q ss_pred CCCCCCCCcHHHHHHHcCCH-HHHHHHHHcC
Q 006702 198 GRQDKEGCTPLHWAAIRGNL-EACTVLVQAG 227 (634)
Q Consensus 198 ~~~d~~g~TpLh~A~~~g~~-~iv~~Ll~~g 227 (634)
...+-+.+++.|...|+. +.++.|++.|
T Consensus 401 --~~~~~n~af~~~~~lgd~~~cv~lL~~~~ 429 (443)
T PF04053_consen 401 --ERGDINIAFQAALLLGDVEECVDLLIETG 429 (443)
T ss_dssp --HTT-HHHHHHHHHHHT-HHHHHHHHHHTT
T ss_pred --HccCHHHHHHHHHHcCCHHHHHHHHHHcC
Confidence 001123566667777765 4566666654
No 156
>PF12773 DZR: Double zinc ribbon
Probab=29.99 E-value=33 Score=24.61 Aligned_cols=22 Identities=32% Similarity=0.905 Sum_probs=20.2
Q ss_pred cccccccccccCCCCCCCCcch
Q 006702 376 SQLCATCKIVRPLRAKHCSTCD 397 (634)
Q Consensus 376 ~~~C~~C~~~kP~Rs~HC~~C~ 397 (634)
..+|+.|....++.+++|..|+
T Consensus 29 ~~~C~~Cg~~~~~~~~fC~~CG 50 (50)
T PF12773_consen 29 KKICPNCGAENPPNAKFCPNCG 50 (50)
T ss_pred CCCCcCCcCCCcCCcCccCccc
Confidence 5789999999999999999986
No 157
>TIGR02484 CitB CitB domain protein. CobZ is essential for cobalamin biosynthesis (by knockout of the R. capsulatus gene ) and is complemented by the characterized precorrin 3B synthase CobG. The enzyme has been shown to contain flavin, heme and Fe-S cluster cofactors and is believed to require dioxygen as a substrate. This model identifies the C-terminal domain of the R. capsulatus CobZ, which, in most other species exists as a separate gene adjacent to CobZ.
Probab=28.64 E-value=2.4e+02 Score=30.00 Aligned_cols=15 Identities=33% Similarity=1.117 Sum_probs=12.7
Q ss_pred CCCCcchhhhhccCCcCcc
Q 006702 391 KHCSTCDRCVEQFDHHCPW 409 (634)
Q Consensus 391 ~HC~~C~~CV~rfDHHCpw 409 (634)
..|..|++| .|.||.
T Consensus 48 ~lChnC~~C----~~~CPy 62 (372)
T TIGR02484 48 HLCHDCQSC----WHDCQY 62 (372)
T ss_pred HHCcCcccc----cccCcC
Confidence 679999999 579997
No 158
>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]
Probab=24.11 E-value=32 Score=33.55 Aligned_cols=16 Identities=31% Similarity=0.457 Sum_probs=11.3
Q ss_pred chhhhhccCCcCcccc
Q 006702 396 CDRCVEQFDHHCPWVS 411 (634)
Q Consensus 396 C~~CV~rfDHHCpwv~ 411 (634)
|-.=..+.+|||||..
T Consensus 34 C~eHrsye~H~Cp~~~ 49 (250)
T KOG3183|consen 34 CLEHRSYESHHCPKGL 49 (250)
T ss_pred hhccchHhhcCCCccc
Confidence 3334567899999964
No 159
>PF06906 DUF1272: Protein of unknown function (DUF1272); InterPro: IPR010696 This family consists of several hypothetical bacterial proteins of around 80 residues in length. This family contains a number of conserved cysteine residues and its function is unknown.
Probab=21.49 E-value=60 Score=24.15 Aligned_cols=35 Identities=34% Similarity=0.895 Sum_probs=24.7
Q ss_pred ccccccccCCC-------CCCCCcchhhhhcc-CCcCccccccccC
Q 006702 379 CATCKIVRPLR-------AKHCSTCDRCVEQF-DHHCPWVSNCIGK 416 (634)
Q Consensus 379 C~~C~~~kP~R-------s~HC~~C~~CV~rf-DHHCpwv~ncIG~ 416 (634)
|..|..--|+- |+-|..|..|+... ++.|| ||=|.
T Consensus 8 CE~C~~dLp~~s~~A~ICSfECTFC~~C~e~~l~~~CP---NCgGe 50 (57)
T PF06906_consen 8 CECCDKDLPPDSPEAYICSFECTFCADCAETMLNGVCP---NCGGE 50 (57)
T ss_pred ccccCCCCCCCCCcceEEeEeCcccHHHHHHHhcCcCc---CCCCc
Confidence 55555444443 46799999999998 99998 55443
No 160
>PF08600 Rsm1: Rsm1-like; InterPro: IPR013909 This entry contains Nuclear-interacting partner of ALK (NIPA) and NIPA like proteins, as well as mRNA export factor Rsm1, all of which contain a C3HC-type zinc finger. The domain represented in this entry is found C-terminal to the zinc-finger like domain IPR012935 from INTERPRO. Rsm1 is involved in mRNA export from the nucleus []. NIPA is an essential component of an SCF-type E3 ligase complex, SCF(NIPA), a complex that controls mitotic entry by mediating ubiquitination and subsequent degradation of cyclin B1 (CCNB1). Its cell-cycle-dependent phosphorylation regulates the assembly of the SCF(NIPA) complex, restricting CCNB1 ubiquitination activity to interphase. Its inactivation results in nuclear accumulation of CCNB1 in interphase and premature mitotic entry [].
Probab=21.46 E-value=37 Score=28.16 Aligned_cols=14 Identities=29% Similarity=0.788 Sum_probs=10.1
Q ss_pred cCCcCccccccccC
Q 006702 403 FDHHCPWVSNCIGK 416 (634)
Q Consensus 403 fDHHCpwv~ncIG~ 416 (634)
+-.||||++.-...
T Consensus 54 Hr~~CPwv~~~~q~ 67 (91)
T PF08600_consen 54 HREYCPWVNPSTQS 67 (91)
T ss_pred ccccCCccCCcccc
Confidence 34689999986643
No 161
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=21.40 E-value=1.3e+03 Score=26.69 Aligned_cols=226 Identities=12% Similarity=0.040 Sum_probs=0.0
Q ss_pred CCCcccccchhhHHHHHHHcCCHHHHHHHHh---ccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC
Q 006702 28 NGVVVDEESLRNDVYTAAAYGDLEKLQRLVE---CEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTG 104 (634)
Q Consensus 28 ~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~---~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g 104 (634)
.+...+.....+.+...++.|.++..+.+++ +.|..++.. ...+.+..-++.|+.+-++.+.+.-...|....+
T Consensus 319 ~g~~pd~~t~~~ll~a~~~~g~~~~a~~i~~~m~~~g~~~d~~--~~~~Li~~y~k~G~~~~A~~vf~~m~~~d~~t~n- 395 (697)
T PLN03081 319 SGVSIDQFTFSIMIRIFSRLALLEHAKQAHAGLIRTGFPLDIV--ANTALVDLYSKWGRMEDARNVFDRMPRKNLISWN- 395 (697)
T ss_pred cCCCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHhCCCCCee--ehHHHHHHHHHCCCHHHHHHHHHhCCCCCeeeHH-
Q ss_pred CcHHHHHHHhCCHH----HHHHHHhcCCCCCccccCCChHHHHHHHhCCH----HHHHHHHHccCCCCCCCCCCCChHHH
Q 006702 105 QTALHWSAVRGAIQ----VAELLLREGARVNAADMYGYQTTHVAAQYGQT----AFLYHIVSKWNADPDVPDNDGRSPLH 176 (634)
Q Consensus 105 ~tpLh~A~~~g~~~----iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~----~~v~~Ll~~~~~~~~~~d~~g~t~Lh 176 (634)
+.+..-++.|+.+ +.+.+.+.|..++... -.+.|...+..|.. +++..+.+..|..++..-.. ..+.
T Consensus 396 -~lI~~y~~~G~~~~A~~lf~~M~~~g~~Pd~~T--~~~ll~a~~~~g~~~~a~~~f~~m~~~~g~~p~~~~y~--~li~ 470 (697)
T PLN03081 396 -ALIAGYGNHGRGTKAVEMFERMIAEGVAPNHVT--FLAVLSACRYSGLSEQGWEIFQSMSENHRIKPRAMHYA--CMIE 470 (697)
T ss_pred -HHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHH--HHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCCCccchH--hHHH
Q ss_pred HHHhcCCH-HHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHH
Q 006702 177 WAAYKGFA-DCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVA 255 (634)
Q Consensus 177 ~A~~~g~~-~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~ 255 (634)
.-++.|.. +..+++-+.+..++..- -.+.|......|+.+..+...+.-...+.+.....-.-.-.++....-.+..
T Consensus 471 ~l~r~G~~~eA~~~~~~~~~~p~~~~--~~~Ll~a~~~~g~~~~a~~~~~~l~~~~p~~~~~y~~L~~~y~~~G~~~~A~ 548 (697)
T PLN03081 471 LLGREGLLDEAYAMIRRAPFKPTVNM--WAALLTACRIHKNLELGRLAAEKLYGMGPEKLNNYVVLLNLYNSSGRQAEAA 548 (697)
T ss_pred HHHhcCCHHHHHHHHHHCCCCCCHHH--HHHHHHHHHHcCCcHHHHHHHHHHhCCCCCCCcchHHHHHHHHhCCCHHHHH
Q ss_pred HHHHHHHH
Q 006702 256 FFLGNARR 263 (634)
Q Consensus 256 ~~L~~~~~ 263 (634)
+++.....
T Consensus 549 ~v~~~m~~ 556 (697)
T PLN03081 549 KVVETLKR 556 (697)
T ss_pred HHHHHHHH
No 162
>PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The FYVE zinc finger is named after four proteins that it has been found in: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two zinc ions []. The FYVE finger has eight potential zinc coordinating cysteine positions. Many members of this family also include two histidines in a motif R+HHC+XCG, where + represents a charged residue and X any residue. FYVE-type domains are divided into two known classes: FYVE domains that specifically bind to phosphatidylinositol 3-phosphate in lipid bilayers and FYVE-related domains of undetermined function []. Those that bind to phosphatidylinositol 3-phosphate are often found in proteins targeted to lipid membranes that are involved in regulating membrane traffic [, , ]. Most FYVE domains target proteins to endosomes by binding specifically to phosphatidylinositol-3-phosphate at the membrane surface. By contrast, the CARP2 FYVE-like domain is not optimized to bind to phosphoinositides or insert into lipid bilayers. FYVE domains are distinguished from other zinc fingers by three signature sequences: an N-terminal WxxD motif, a basic R(R/K)HHCR patch, and a C-terminal RVC motif. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0046872 metal ion binding; PDB: 1HYI_A 1JOC_B 1HYJ_A 1DVP_A 3ZYQ_A 4AVX_A 1VFY_A 3T7L_A 1X4U_A 1WFK_A ....
Probab=21.15 E-value=34 Score=26.44 Aligned_cols=26 Identities=31% Similarity=0.579 Sum_probs=11.9
Q ss_pred ccccccccccc--CCCCCCCCcchhhhh
Q 006702 376 SQLCATCKIVR--PLRAKHCSTCDRCVE 401 (634)
Q Consensus 376 ~~~C~~C~~~k--P~Rs~HC~~C~~CV~ 401 (634)
...|..|...= -.|-|||+.||+.|=
T Consensus 9 ~~~C~~C~~~F~~~~rrhhCr~CG~~vC 36 (69)
T PF01363_consen 9 ASNCMICGKKFSLFRRRHHCRNCGRVVC 36 (69)
T ss_dssp -SB-TTT--B-BSSS-EEE-TTT--EEE
T ss_pred CCcCcCcCCcCCCceeeEccCCCCCEEC
Confidence 35677776432 468899999988553
No 163
>PF06143 Baculo_11_kDa: Baculovirus 11 kDa family; InterPro: IPR009313 This is a family of uncharacterised Baculovirus proteins that are all about 11 kDa in size.
Probab=20.49 E-value=2.7e+02 Score=22.79 Aligned_cols=31 Identities=19% Similarity=0.219 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 006702 473 IADFSLFFGVAVLTAVQASQISRNITTNEMA 503 (634)
Q Consensus 473 ~~~~~~~~~~~~l~~~~~~~i~~n~TT~E~~ 503 (634)
+++.+..+-++.+++.-++.|.+|.-..|.-
T Consensus 39 Vic~~lVfVii~lFi~ll~~i~~~~e~~~~~ 69 (84)
T PF06143_consen 39 VICCFLVFVIIVLFILLLYNINKNAEQDRAE 69 (84)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3443333434455555566777766554433
Done!