Query 006702
Match_columns 634
No_of_seqs 566 out of 3761
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 06:41:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006702.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006702hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 100.0 2.5E-39 8.7E-44 325.4 23.9 228 30-261 3-245 (253)
2 2xai_A ASB-9, ankyrin repeat a 100.0 5.9E-39 2E-43 324.3 26.2 245 36-288 2-255 (261)
3 3aji_A 26S proteasome non-ATPa 100.0 9E-39 3.1E-43 315.9 26.3 226 35-263 4-229 (231)
4 1k1a_A B-cell lymphoma 3-encod 100.0 8.4E-39 2.9E-43 317.8 22.8 226 32-260 4-237 (241)
5 3b7b_A Euchromatic histone-lys 100.0 6.6E-38 2.3E-42 310.9 28.7 225 30-258 4-229 (237)
6 1wdy_A 2-5A-dependent ribonucl 100.0 1.2E-37 4E-42 316.7 28.9 221 36-260 4-240 (285)
7 1wdy_A 2-5A-dependent ribonucl 100.0 4.4E-37 1.5E-41 312.4 30.4 226 34-262 36-276 (285)
8 4g8k_A 2-5A-dependent ribonucl 100.0 1.8E-37 6.1E-42 325.2 26.6 227 33-261 21-295 (337)
9 3d9h_A CDNA FLJ77766, highly s 100.0 2.2E-37 7.6E-42 317.1 25.9 224 30-261 52-275 (285)
10 3utm_A Tankyrase-1; tankyrase, 100.0 3E-37 1E-41 323.6 27.5 246 31-289 18-320 (351)
11 4b93_B Ankyrin repeat domain-c 100.0 2.4E-38 8.3E-43 321.5 18.1 220 33-258 7-235 (269)
12 3ljn_A Hypothetical protein; a 100.0 9.4E-38 3.2E-42 330.9 23.1 227 30-262 13-267 (364)
13 1n11_A Ankyrin; clathrin, BAND 100.0 4E-37 1.4E-41 334.1 27.7 228 30-261 7-234 (437)
14 1oy3_D Transcription factor in 100.0 1.4E-37 4.9E-42 316.2 22.7 216 32-251 4-270 (282)
15 1n11_A Ankyrin; clathrin, BAND 100.0 1.2E-36 4E-41 330.5 28.9 224 34-261 143-366 (437)
16 1s70_B 130 kDa myosin-binding 100.0 6.8E-38 2.3E-42 322.1 17.3 223 33-258 36-284 (299)
17 3d9h_A CDNA FLJ77766, highly s 100.0 1.3E-36 4.3E-41 311.6 26.4 242 34-280 12-264 (285)
18 2dzn_A Probable 26S proteasome 100.0 8.7E-37 3E-41 300.8 23.7 216 37-258 2-224 (228)
19 3eu9_A Huntingtin-interacting 100.0 3.4E-36 1.1E-40 298.1 26.7 227 33-263 5-234 (240)
20 3utm_A Tankyrase-1; tankyrase, 100.0 5.3E-36 1.8E-40 314.1 28.7 225 31-263 52-333 (351)
21 2fo1_E LIN-12 protein; beta-ba 100.0 4.9E-37 1.7E-41 326.9 19.8 224 35-261 123-368 (373)
22 2f8y_A Notch homolog 1, transl 100.0 1.6E-36 5.4E-41 298.1 21.2 211 48-262 2-214 (223)
23 1yyh_A HN1;, notch 1, ankyrin 100.0 5.2E-36 1.8E-40 301.2 19.3 224 62-287 1-239 (253)
24 1oy3_D Transcription factor in 100.0 2E-35 6.7E-40 300.4 21.7 210 64-276 2-263 (282)
25 3b7b_A Euchromatic histone-lys 100.0 8.6E-35 2.9E-39 288.5 24.9 219 62-282 2-221 (237)
26 1k1a_A B-cell lymphoma 3-encod 100.0 1.6E-34 5.6E-39 286.8 24.7 220 64-286 2-231 (241)
27 2fo1_E LIN-12 protein; beta-ba 100.0 4.5E-36 1.5E-40 319.5 14.1 247 32-284 89-359 (373)
28 3kea_A K1L; tropism, ANK repea 100.0 4.7E-35 1.6E-39 299.9 19.3 222 31-266 25-248 (285)
29 2f8y_A Notch homolog 1, transl 100.0 1E-33 3.4E-38 278.0 26.9 195 33-229 21-216 (223)
30 4g8k_A 2-5A-dependent ribonucl 100.0 1E-33 3.5E-38 296.6 28.0 220 34-262 56-324 (337)
31 2xai_A ASB-9, ankyrin repeat a 100.0 5.7E-34 2E-38 287.7 24.1 207 70-281 2-209 (261)
32 3hra_A Ankyrin repeat family p 100.0 8.6E-34 3E-38 273.9 24.3 193 35-227 3-201 (201)
33 2rfa_A Transient receptor pote 100.0 4.8E-34 1.7E-38 282.3 23.0 206 37-263 3-221 (232)
34 3kea_A K1L; tropism, ANK repea 100.0 2.1E-34 7.3E-39 295.0 19.2 232 44-289 6-239 (285)
35 1ikn_D Protein (I-kappa-B-alph 100.0 1.7E-35 5.8E-40 293.9 9.8 216 33-249 4-229 (236)
36 2rfa_A Transient receptor pote 100.0 1.6E-33 5.4E-38 278.5 23.9 199 70-291 2-217 (232)
37 3hra_A Ankyrin repeat family p 100.0 5E-33 1.7E-37 268.5 24.2 191 68-260 2-199 (201)
38 3aji_A 26S proteasome non-ATPa 100.0 1.7E-33 5.8E-38 278.0 21.1 195 32-228 35-229 (231)
39 2dzn_A Probable 26S proteasome 100.0 3.4E-33 1.1E-37 275.1 22.7 210 71-282 2-219 (228)
40 3ljn_A Hypothetical protein; a 100.0 4.5E-34 1.5E-38 302.6 17.0 224 32-259 48-309 (364)
41 4gpm_A Engineered protein OR26 100.0 6.6E-33 2.3E-37 261.1 20.7 156 74-230 7-162 (169)
42 1s70_B 130 kDa myosin-binding 100.0 3.7E-33 1.3E-37 286.7 20.5 235 43-281 4-275 (299)
43 4b93_B Ankyrin repeat domain-c 100.0 2.8E-33 9.6E-38 284.2 18.4 215 65-282 5-229 (269)
44 2pnn_A Transient receptor pote 100.0 9.3E-34 3.2E-38 287.8 14.6 211 31-242 7-270 (273)
45 2etb_A Transient receptor pote 100.0 2.3E-33 8E-38 282.0 16.1 202 37-262 2-244 (256)
46 1ikn_D Protein (I-kappa-B-alph 100.0 7.3E-34 2.5E-38 282.0 11.9 210 65-277 2-225 (236)
47 4gpm_A Engineered protein OR26 100.0 2.3E-32 8E-37 257.4 21.0 161 37-199 4-164 (169)
48 2etb_A Transient receptor pote 100.0 7.2E-33 2.5E-37 278.4 17.2 198 70-292 1-242 (256)
49 3eu9_A Huntingtin-interacting 100.0 1.4E-31 4.8E-36 264.8 22.5 217 64-283 2-222 (240)
50 2pnn_A Transient receptor pote 100.0 1.8E-32 6.3E-37 278.3 15.1 203 60-263 2-257 (273)
51 3jxi_A Vanilloid receptor-rela 100.0 2.6E-32 9E-37 274.8 14.1 192 36-227 4-248 (260)
52 1sw6_A Regulatory protein SWI6 100.0 1.5E-32 5.1E-37 287.0 11.8 199 41-250 101-327 (327)
53 3jxi_A Vanilloid receptor-rela 100.0 2.3E-31 7.7E-36 267.9 15.7 197 68-265 2-251 (260)
54 2rfm_A Putative ankyrin repeat 100.0 1.9E-30 6.6E-35 249.0 17.6 164 63-227 27-190 (192)
55 1sw6_A Regulatory protein SWI6 100.0 1.5E-31 5.2E-36 279.3 9.2 232 33-280 48-325 (327)
56 4hbd_A KN motif and ankyrin re 100.0 9.4E-31 3.2E-35 266.6 14.8 186 72-260 77-271 (276)
57 3v30_A DNA-binding protein rfx 100.0 5.8E-30 2E-34 241.0 16.9 168 72-242 3-171 (172)
58 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.3E-29 7.8E-34 236.5 19.8 159 68-227 11-169 (169)
59 4hbd_A KN motif and ankyrin re 100.0 2.8E-30 9.7E-35 263.1 14.3 188 38-227 77-273 (276)
60 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.8E-29 6.1E-34 234.9 17.8 157 70-228 4-161 (162)
61 3v31_A Ankyrin repeat family A 100.0 3.5E-29 1.2E-33 234.5 19.0 157 70-227 2-158 (167)
62 3v30_A DNA-binding protein rfx 100.0 1.6E-29 5.4E-34 238.0 16.6 169 38-207 3-171 (172)
63 2rfm_A Putative ankyrin repeat 100.0 5.9E-29 2E-33 238.6 19.2 163 97-262 28-190 (192)
64 1ihb_A P18-INK4C(INK6), cyclin 100.0 7.7E-29 2.6E-33 230.6 18.5 159 35-196 3-162 (162)
65 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.9E-28 6.4E-33 230.3 21.0 160 33-194 10-169 (169)
66 2vge_A RELA-associated inhibit 100.0 1.1E-31 3.7E-36 265.9 -3.1 200 53-257 1-206 (229)
67 1awc_B Protein (GA binding pro 100.0 3.6E-28 1.2E-32 224.3 19.0 150 72-223 3-152 (153)
68 3f6q_A Integrin-linked protein 100.0 1.6E-28 5.6E-33 232.8 16.6 161 38-199 6-166 (179)
69 3v31_A Ankyrin repeat family A 100.0 7.7E-28 2.6E-32 225.3 20.7 159 103-264 2-160 (167)
70 3f6q_A Integrin-linked protein 100.0 2E-28 6.8E-33 232.3 16.6 168 69-239 3-171 (179)
71 3twr_A Tankyrase-2; ankyrin re 100.0 3.6E-28 1.2E-32 227.1 16.9 160 34-195 5-164 (165)
72 3twr_A Tankyrase-2; ankyrin re 100.0 2.5E-28 8.6E-33 228.1 14.5 160 67-228 4-164 (165)
73 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.8E-27 6.1E-32 220.0 19.4 151 38-191 3-153 (156)
74 1awc_B Protein (GA binding pro 100.0 2.5E-27 8.5E-32 218.7 20.2 151 37-190 2-152 (153)
75 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.3E-27 4.3E-32 221.1 17.6 153 71-226 2-155 (156)
76 2vge_A RELA-associated inhibit 100.0 1.3E-30 4.4E-35 258.1 -3.4 188 32-224 16-208 (229)
77 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.3E-28 4.4E-33 245.2 8.0 182 68-251 2-193 (239)
78 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6.7E-28 2.3E-32 240.0 7.9 208 35-247 3-226 (239)
79 2aja_A Ankyrin repeat family p 99.9 1.3E-28 4.3E-33 261.1 -3.1 238 34-287 89-365 (376)
80 1d9s_A Cyclin-dependent kinase 99.9 8.7E-26 3E-30 204.1 12.9 131 62-227 3-134 (136)
81 1bi7_B P16INK4A, MTS1, multipl 99.9 6.5E-26 2.2E-30 210.0 12.1 142 66-209 7-149 (156)
82 1d9s_A Cyclin-dependent kinase 99.9 9.1E-26 3.1E-30 204.0 12.8 132 127-262 2-134 (136)
83 3t8k_A Uncharacterized protein 99.9 1.5E-26 5.1E-31 221.2 7.9 155 36-193 5-176 (186)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 1.4E-25 4.8E-30 207.7 11.4 146 97-246 5-151 (156)
85 3t8k_A Uncharacterized protein 99.9 4.3E-26 1.5E-30 218.0 6.8 154 71-227 6-177 (186)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 7.8E-24 2.7E-28 191.2 15.1 122 70-192 13-134 (136)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.6E-23 5.3E-28 185.4 16.5 124 71-195 2-125 (126)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 1.3E-23 4.3E-28 189.8 15.0 126 101-227 11-136 (136)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.8E-23 9.7E-28 183.7 16.6 125 103-228 1-125 (126)
90 2aja_A Ankyrin repeat family p 99.9 1.7E-26 5.7E-31 244.8 -7.0 193 39-254 67-269 (376)
91 3c5r_A BARD-1, BRCA1-associate 99.9 1E-23 3.5E-28 190.5 9.9 131 62-194 2-132 (137)
92 3deo_A Signal recognition part 99.9 2.6E-23 8.8E-28 197.9 11.8 137 70-225 43-180 (183)
93 3c5r_A BARD-1, BRCA1-associate 99.9 9.9E-24 3.4E-28 190.6 8.4 131 94-226 1-131 (137)
94 3ui2_A Signal recognition part 99.9 9E-23 3.1E-27 203.6 13.8 139 70-227 44-183 (244)
95 3deo_A Signal recognition part 99.9 9.6E-23 3.3E-27 193.9 13.2 140 34-193 41-181 (183)
96 3ui2_A Signal recognition part 99.9 9.6E-23 3.3E-27 203.4 11.9 143 34-196 42-185 (244)
97 2b0o_E UPLC1; arfgap, structur 99.9 2.3E-22 7.8E-27 207.1 12.4 142 102-252 149-299 (301)
98 3ehr_A Osteoclast-stimulating 99.9 7.2E-23 2.5E-27 200.9 8.3 134 68-202 70-204 (222)
99 2b0o_E UPLC1; arfgap, structur 99.9 2.8E-22 9.4E-27 206.5 12.7 143 68-217 148-299 (301)
100 3aaa_C Myotrophin, protein V-1 99.9 4.1E-22 1.4E-26 176.5 11.8 108 70-178 6-113 (123)
101 3ehr_A Osteoclast-stimulating 99.9 1E-22 3.4E-27 199.9 7.2 129 100-228 69-197 (222)
102 3aaa_C Myotrophin, protein V-1 99.9 8E-22 2.7E-26 174.6 11.4 115 34-149 4-118 (123)
103 3jue_A Arfgap with coiled-coil 99.8 2E-20 6.7E-25 197.4 14.3 121 72-193 200-323 (368)
104 1dcq_A PYK2-associated protein 99.8 1.2E-19 4.1E-24 184.6 19.2 121 106-227 132-261 (278)
105 3jue_A Arfgap with coiled-coil 99.8 2.9E-20 9.9E-25 196.1 15.0 149 32-181 194-347 (368)
106 3lvq_E ARF-GAP with SH3 domain 99.8 4.1E-20 1.4E-24 203.8 15.7 126 73-199 134-268 (497)
107 3lvq_E ARF-GAP with SH3 domain 99.8 5.3E-20 1.8E-24 202.9 15.8 135 38-180 133-276 (497)
108 1dcq_A PYK2-associated protein 99.8 1.2E-19 4E-24 184.7 14.2 125 72-197 131-264 (278)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.9E-19 6.5E-24 150.9 12.3 89 71-159 2-90 (93)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.8 5.9E-19 2E-23 147.9 12.5 91 104-195 2-92 (93)
111 2l6b_A NR1C; ankyrin, consensu 99.8 1.3E-19 4.6E-24 158.0 6.7 63 69-131 7-69 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.8 3.1E-19 1E-23 155.8 8.1 107 100-207 5-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 4.3E-17 1.5E-21 141.2 11.0 89 34-123 21-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 4.1E-16 1.4E-20 135.0 13.1 94 63-156 16-109 (110)
115 3j21_g 50S ribosomal protein L 61.3 3.2 0.00011 29.3 1.4 27 376-402 14-40 (51)
116 2ayj_A 50S ribosomal protein L 60.4 3.2 0.00011 29.7 1.3 27 376-402 19-45 (56)
117 2knc_B Integrin beta-3; transm 37.5 83 0.0029 24.2 6.2 33 473-505 17-49 (79)
118 1joc_A EEA1, early endosomal a 30.0 15 0.00051 31.3 0.9 25 376-400 69-95 (125)
119 1x4u_A Zinc finger, FYVE domai 28.5 16 0.00056 28.5 0.8 24 376-399 14-39 (84)
120 1vfy_A Phosphatidylinositol-3- 27.1 15 0.0005 28.0 0.3 24 377-400 12-37 (73)
121 1dvp_A HRS, hepatocyte growth 25.0 17 0.00059 34.2 0.4 24 377-400 162-187 (220)
122 2yw8_A RUN and FYVE domain-con 22.9 24 0.00081 27.5 0.7 25 376-400 19-45 (82)
123 2cr8_A MDM4 protein; ZF-ranbp 21.6 37 0.0013 23.7 1.4 18 379-396 14-31 (53)
124 1gp8_A Protein (scaffolding pr 21.4 53 0.0018 21.4 2.0 23 36-58 12-34 (40)
125 4g26_A Pentatricopeptide repea 21.1 80 0.0027 33.6 4.7 113 37-156 29-162 (501)
126 1z2q_A LM5-1; membrane protein 20.3 30 0.001 27.0 0.8 25 376-400 21-47 (84)
127 1wfk_A Zinc finger, FYVE domai 20.3 25 0.00086 27.8 0.4 23 377-399 10-34 (88)
128 3t7l_A Zinc finger FYVE domain 20.1 33 0.0011 27.2 1.0 25 376-400 20-46 (90)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.5e-39 Score=325.38 Aligned_cols=228 Identities=28% Similarity=0.349 Sum_probs=185.7
Q ss_pred CcccccchhhHHHHHHHcC-------------CHHHHHHHHhccCCCCcC-CCCCCchHHHHHHHcCCHHHHHHHHhcCC
Q 006702 30 VVVDEESLRNDVYTAAAYG-------------DLEKLQRLVECEGCSVSE-PDGLGYYALQWAALNNRTAAAQYIIEHGG 95 (634)
Q Consensus 30 ~~~~~~~~~~~L~~Aa~~g-------------~~~~v~~Ll~~~~~~~~~-~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~ga 95 (634)
++..++.+.||||.|+..| +.++++.|++ .|.+++. .|..|.||||+|+..|+.+++++|+++|+
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~-~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIY-QGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHH-ccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 3456788999999999987 8999999998 6777654 58999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCC-CCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChH
Q 006702 96 DVNAADHTGQTALHWSAVRGAIQVAELLLREGA-RVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSP 174 (634)
Q Consensus 96 d~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~ga-d~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~ 174 (634)
+++.+|..|.||||+|+..|+.+++++|+++|+ +++.++..|.||||+|+..|+.+++++|++. |++++.+|..|.||
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~ 160 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS-HADVNAVDDLGKSA 160 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT-TCCTTCBCTTSCBH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHc-CCCCCCcCCCCCCH
Confidence 999999999999999999999999999999998 8999999999999999999999999999997 99999999999999
Q ss_pred HHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHH
Q 006702 175 LHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQV 254 (634)
Q Consensus 175 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i 254 (634)
||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||+++|+++|+.++
T Consensus 161 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g--a~~~~~d~~g~tpl~~A~~~g~~~i 238 (253)
T 1yyh_A 161 LHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF--ANRDITDHMDRLPRDIAQERMHHDI 238 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC--CCccccccCCCCHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999 6788999999999999999999999
Q ss_pred HHHHHHH
Q 006702 255 AFFLGNA 261 (634)
Q Consensus 255 ~~~L~~~ 261 (634)
+++|...
T Consensus 239 ~~~l~~~ 245 (253)
T 1yyh_A 239 VRLLDLE 245 (253)
T ss_dssp HHHHHC-
T ss_pred HHHHHHH
Confidence 9998643
No 2
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=324.33 Aligned_cols=245 Identities=24% Similarity=0.280 Sum_probs=223.6
Q ss_pred chhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q 006702 36 SLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRG 115 (634)
Q Consensus 36 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g 115 (634)
+++||||.|+..|+.++++.|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLIS-QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 46899999999999999999999 78999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCC
Q 006702 116 AIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDA 195 (634)
Q Consensus 116 ~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga 195 (634)
+.+++++|+++|++++. +..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|+
T Consensus 81 ~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 158 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHLGTPLYLACENQQRACVKKLLESGA 158 (261)
T ss_dssp CHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence 99999999999999985 45699999999999999999999988 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHH---------HHHhc
Q 006702 196 YRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNA---------RRLLD 266 (634)
Q Consensus 196 ~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~---------~~l~~ 266 (634)
+++. |..|.||||+|+..|+.+++++|+++| +|++.+|..|+||+++|+..+ +++++|.+. .++..
T Consensus 159 ~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~g--ad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~ 233 (261)
T 2xai_A 159 DVNQ-GKGQDSPLHAVARTASEELACLLMDFG--ADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRI 233 (261)
T ss_dssp CTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHH
T ss_pred CCCC-CCCCCChHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHH
Confidence 9995 889999999999999999999999999 678899999999999999665 467776542 34555
Q ss_pred ccCCCCCCcccccccCcchhHH
Q 006702 267 KRCDGNSPIGKISKLGLAPALW 288 (634)
Q Consensus 267 ~~~~~~~~~~~~~~~g~~~l~~ 288 (634)
++..+.++++.+.+...++.+.
T Consensus 234 r~~~g~t~l~~~~~~~~p~~l~ 255 (261)
T 2xai_A 234 RKCFGIQQHHKITKLVLPEDLK 255 (261)
T ss_dssp HTTSCTTCGGGGGGSSSCHHHH
T ss_pred HHHhchhccccCcccCCcHHHH
Confidence 6778889998888877766544
No 3
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=9e-39 Score=315.89 Aligned_cols=226 Identities=27% Similarity=0.362 Sum_probs=216.3
Q ss_pred cchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q 006702 35 ESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVR 114 (634)
Q Consensus 35 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~ 114 (634)
....++|+.|++.|+++.++.|++..+..++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 83 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASA 83 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHc
Confidence 35678999999999999999999976667888999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcC
Q 006702 115 GAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLD 194 (634)
Q Consensus 115 g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g 194 (634)
|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 84 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 162 (231)
T 3aji_A 84 GXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG-GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYK 162 (231)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999988 9999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHH
Q 006702 195 AYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARR 263 (634)
Q Consensus 195 a~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~ 263 (634)
++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|+..++.+++++|.+.+.
T Consensus 163 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--a~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 163 ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQG--ASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEA 229 (231)
T ss_dssp CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence 999999999999999999999999999999999 6788999999999999999999999999876543
No 4
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=8.4e-39 Score=317.82 Aligned_cols=226 Identities=25% Similarity=0.275 Sum_probs=213.1
Q ss_pred ccccchhhHHHHHHHcCCHHHHHHHHh---ccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q 006702 32 VDEESLRNDVYTAAAYGDLEKLQRLVE---CEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTAL 108 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~---~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpL 108 (634)
..++.+.|+||.|++.|+.+++++|++ ..+.+++..|..|.||||+|+..|+.+++++|+++|++++.++..|.|||
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 83 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA 83 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 457789999999999999999999997 47899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHhcCC----CCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCC-CCCChHHHHHHhcCC
Q 006702 109 HWSAVRGAIQVAELLLREGA----RVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPD-NDGRSPLHWAAYKGF 183 (634)
Q Consensus 109 h~A~~~g~~~iv~~Ll~~ga----d~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh~A~~~g~ 183 (634)
|+|+..|+.+++++|+++++ +++.+|..|.||||+|+..|+.+++++|++. |++++..+ ..|.||||+|+..|+
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER-GADIDAVDIKSGRSPLIHAVENNS 162 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc-CCCcccccccCCCcHHHHHHHcCC
Confidence 99999999999999999998 8899999999999999999999999999988 99999999 889999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHH
Q 006702 184 ADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGN 260 (634)
Q Consensus 184 ~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~ 260 (634)
.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|+..++.++++.|.+
T Consensus 163 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--a~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~ 237 (241)
T 1k1a_A 163 LSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG--ADSSLKNCHNDTPLMVARSRRVIDILRGKAT 237 (241)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCTTTTCSSHHHHHHHTC---
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcC--CCCCCcCCCCCCHHHHHHhcCcHHHHhhhcc
Confidence 99999999999999999999999999999999999999999999 6788999999999999999999999988754
No 5
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6.6e-38 Score=310.92 Aligned_cols=225 Identities=28% Similarity=0.396 Sum_probs=215.2
Q ss_pred CcccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 006702 30 VVVDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALH 109 (634)
Q Consensus 30 ~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh 109 (634)
....++.+.++||.|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 82 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQ-AGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLH 82 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHH-cCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Confidence 34567889999999999999999999999 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHhcC-CCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHH
Q 006702 110 WSAVRGAIQVAELLLREG-ARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIR 188 (634)
Q Consensus 110 ~A~~~g~~~iv~~Ll~~g-ad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~ 188 (634)
+|+..|+.+++++|+++| ++++..+..|.||||.|+..++.+++++|++. |++++.+|..|.||||+|+..|+.++++
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 161 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK-GSDINIRDNEENICLHWAAFSGCVDIAE 161 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHCCCHHHHH
Confidence 999999999999999999 89999999999999999999999999999987 9999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHH
Q 006702 189 LLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFL 258 (634)
Q Consensus 189 ~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L 258 (634)
+|++.|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|+..++.+.+..|
T Consensus 162 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--ad~~~~d~~g~t~l~~A~~~~~~~~~~~l 229 (237)
T 3b7b_A 162 ILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRD--SDVTLKNKEGETPLQCASLNSQVWSALQM 229 (237)
T ss_dssp HHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT--CCTTCCCTTSCCHHHHSCTTCHHHHHHHH
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcC--CCCCccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 67889999999999999999998655554
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-37 Score=316.68 Aligned_cols=221 Identities=26% Similarity=0.372 Sum_probs=190.0
Q ss_pred chhhHHHHHHHcCCHHHHHHHHhccCCCCcCC-CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q 006702 36 SLRNDVYTAAAYGDLEKLQRLVECEGCSVSEP-DGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVR 114 (634)
Q Consensus 36 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~-d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~ 114 (634)
.+.++|+.|++.|+.+++++|++ .+.+++.. +..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLE-GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHH-cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 56788888888888888888888 67788776 77788888888888888888888888888888888888888888888
Q ss_pred CCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCC----------CCCCChHHHHHHhcCCH
Q 006702 115 GAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVP----------DNDGRSPLHWAAYKGFA 184 (634)
Q Consensus 115 g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~----------d~~g~t~Lh~A~~~g~~ 184 (634)
|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. +++++.. +..|.||||+|+..|+.
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 161 (285)
T 1wdy_A 83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR-GANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHh-CCCcccccccHHHHHhhccCCCcHHHHHHHcCCH
Confidence 888888888888888888888888888888888888888888887 8888776 67788888888888888
Q ss_pred HHHHHHhhc-CCCCCCCCCCCCcHHHHHHHcCC----HHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHH
Q 006702 185 DCIRLLLFL-DAYRGRQDKEGCTPLHWAAIRGN----LEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLG 259 (634)
Q Consensus 185 ~~v~~Ll~~-ga~~~~~d~~g~TpLh~A~~~g~----~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~ 259 (634)
+++++|++. |++++.+|..|.||||+|+..++ .+++++|+++| ++++.+|..|.||||+|+..++.+++++|.
T Consensus 162 ~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 239 (285)
T 1wdy_A 162 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG--ADVNVRGERGKTPLILAVEKKHLGLVQRLL 239 (285)
T ss_dssp HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTT--CCSSCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 888888876 88888888888888888888888 88888888888 567788888888888888888888888875
Q ss_pred H
Q 006702 260 N 260 (634)
Q Consensus 260 ~ 260 (634)
+
T Consensus 240 ~ 240 (285)
T 1wdy_A 240 E 240 (285)
T ss_dssp H
T ss_pred h
Confidence 5
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.4e-37 Score=312.42 Aligned_cols=226 Identities=25% Similarity=0.254 Sum_probs=216.9
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAV 113 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~ 113 (634)
+..+.++||.|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 114 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLR-HGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAV 114 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHH
Confidence 5668899999999999999999998 799999999999999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHhcCCCCCcc----------ccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCC
Q 006702 114 RGAIQVAELLLREGARVNAA----------DMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGF 183 (634)
Q Consensus 114 ~g~~~iv~~Ll~~gad~~~~----------d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~ 183 (634)
.|+.+++++|+++|++++.+ +..|.||||.|+..|+.+++++|++..+++++.+|..|.||||+|+..++
T Consensus 115 ~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 194 (285)
T 1wdy_A 115 YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSD 194 (285)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSC
T ss_pred hCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccc
Confidence 99999999999999999887 78899999999999999999999998899999999999999999999999
Q ss_pred ----HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCccccCCCCCCHHHHHHhcCcHHHHHHH
Q 006702 184 ----ADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQ-AGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFL 258 (634)
Q Consensus 184 ----~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~-~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L 258 (634)
.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++ .| ++++.+|..|.||||+|++.++.+++++|
T Consensus 195 ~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g--~~~~~~~~~g~t~l~~A~~~~~~~i~~~L 272 (285)
T 1wdy_A 195 DSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH--IEINDTDSDGKTALLLAVELKLKKIAELL 272 (285)
T ss_dssp TTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSS--CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccC--CCccccCCCCCcHHHHHHHcCcHHHHHHH
Confidence 899999999999999999999999999999999999999999 67 68889999999999999999999999998
Q ss_pred HHHH
Q 006702 259 GNAR 262 (634)
Q Consensus 259 ~~~~ 262 (634)
.+.+
T Consensus 273 l~~G 276 (285)
T 1wdy_A 273 CKRG 276 (285)
T ss_dssp HHHS
T ss_pred HHcC
Confidence 6643
No 8
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.8e-37 Score=325.18 Aligned_cols=227 Identities=26% Similarity=0.280 Sum_probs=204.6
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCC-CCchHHHHHHHcCCHHHHHHHHhcCCCCC-------------
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDG-LGYYALQWAALNNRTAAAQYIIEHGGDVN------------- 98 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n------------- 98 (634)
....+.++|+.||+.|++++|+.||+ .|+++|.++. .|.||||+||..|+.++|++|+++|++++
T Consensus 21 ~~~~~~t~L~~Av~~g~~~~V~~LL~-~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 21 AAVEDNHLLIKAVQNEDVDLVQQLLE-GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILA 99 (337)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCCCCChHHHHHHHcCCHHHHHHHHH-CCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHH
Confidence 44567899999999999999999999 7999998875 59999999999999999999999987654
Q ss_pred --------------------CCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCcc----------ccCCChHHHHHHHhC
Q 006702 99 --------------------AADHTGQTALHWSAVRGAIQVAELLLREGARVNAA----------DMYGYQTTHVAAQYG 148 (634)
Q Consensus 99 --------------------~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~----------d~~g~t~L~~Aa~~g 148 (634)
.+|..|.||||+|+..|+.+++++|+++|++++.+ +..|.||||+|+..|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g 179 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 179 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHT
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCC
Confidence 45677899999999999999999999999998754 456899999999999
Q ss_pred CHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCC----HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 006702 149 QTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGF----ADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLV 224 (634)
Q Consensus 149 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~----~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll 224 (634)
+.+++++|+++.|++++.+|..|.|+|+.++..+. ..++++|++.|++++.+|..|+||||+|+..|+.++++.|+
T Consensus 180 ~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll 259 (337)
T 4g8k_A 180 HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL 259 (337)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHH
Confidence 99999999988799999999999999998876554 36889999999999999999999999999999999999999
Q ss_pred HcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHH
Q 006702 225 QAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNA 261 (634)
Q Consensus 225 ~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~ 261 (634)
+.+ .++++.+|.+|.||||+|++.|+.+++++|.+.
T Consensus 260 ~~~-~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 295 (337)
T 4g8k_A 260 EQE-HIEINDTDSDGKTALLLAVELKLKKIAELLCKR 295 (337)
T ss_dssp TST-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT
T ss_pred Hhc-CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 863 268899999999999999999999999997543
No 9
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=317.13 Aligned_cols=224 Identities=22% Similarity=0.259 Sum_probs=211.1
Q ss_pred CcccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 006702 30 VVVDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALH 109 (634)
Q Consensus 30 ~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh 109 (634)
...++..+.|+||.||..|+.++++.|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~ 130 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLIS-QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLF 130 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHH-TTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 34578889999999999999999999999 78999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHH
Q 006702 110 WSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRL 189 (634)
Q Consensus 110 ~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~ 189 (634)
+|+..|+.+++++|+++|++++..+ .|.||||+|+..|+.+++++|++. +++++.+|..|.||||+|+..|+.+++++
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~ 208 (285)
T 3d9h_A 131 NACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHLGTPLYLACENQQRACVKK 208 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 9999999999999999999998654 499999999999999999999987 99999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHH
Q 006702 190 LLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNA 261 (634)
Q Consensus 190 Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~ 261 (634)
|++.|++++. |..|.||||+|+..|+.+++++|+++| ++++.+|..|+||+++|+. +.+++++|.+.
T Consensus 209 Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--ad~~~~d~~g~t~l~~A~~--~~~~~~~Ll~~ 275 (285)
T 3d9h_A 209 LLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFG--ADTQAKNAEGKRPVELVPP--ESPLAQLFLER 275 (285)
T ss_dssp HHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCGGGGSCT--TSHHHHHHHHH
T ss_pred HHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHhcC--ccHHHHHHHHh
Confidence 9999999995 889999999999999999999999999 6788999999999999994 46788887654
No 10
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3e-37 Score=323.58 Aligned_cols=246 Identities=30% Similarity=0.358 Sum_probs=223.0
Q ss_pred cccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 006702 31 VVDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHW 110 (634)
Q Consensus 31 ~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~ 110 (634)
...++.+.++|+.||+.|+.+.++.|++..+.+++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 18 ~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 97 (351)
T 3utm_A 18 VLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHN 97 (351)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred eeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 34567789999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCC----------------------
Q 006702 111 SAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPD---------------------- 168 (634)
Q Consensus 111 A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d---------------------- 168 (634)
|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++..+
T Consensus 98 A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 176 (351)
T 3utm_A 98 ACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSH-GADPTLVNCHGKSAVDMAPTPELRERLTYE 176 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCSSHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCcchHHHhhhhhHHHHHhh
Confidence 9999999999999999999999999999999999999999999999988 88877654
Q ss_pred --------------------------------CCCChHHHHHHhc---CCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 006702 169 --------------------------------NDGRSPLHWAAYK---GFADCIRLLLFLDAYRGRQDKEGCTPLHWAAI 213 (634)
Q Consensus 169 --------------------------------~~g~t~Lh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~ 213 (634)
..|.||||+|+.. +..+++++|++.|++++.+|..|.||||+|+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 256 (351)
T 3utm_A 177 FKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAE 256 (351)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred hcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHH
Confidence 5567999999998 55799999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHHHhcccCCCCCCcccccccCcchhHHH
Q 006702 214 RGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARRLLDKRCDGNSPIGKISKLGLAPALWC 289 (634)
Q Consensus 214 ~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~l~~~~~~~~~~~~~~~~~g~~~l~~~ 289 (634)
.|+.+++++|+++| ++++.+|..|.||||+|+..++.+++++|.+.+ .+. ......|.+|+.++
T Consensus 257 ~g~~~~v~~Ll~~g--a~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g------ad~----~~~~~~g~tal~~a 320 (351)
T 3utm_A 257 RAHNDVMEVLHKHG--AKMNALDSLGQTALHRAALAGHLQTCRLLLSYG------SDP----SIISLQGFTAAQMG 320 (351)
T ss_dssp TTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT------CCT----TCCCTTSCCHHHHS
T ss_pred cCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC------CCC----CCcCCCCCChhhhh
Confidence 99999999999999 678899999999999999999999999986543 222 22345566766654
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=321.54 Aligned_cols=220 Identities=25% Similarity=0.296 Sum_probs=179.0
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccCCC--------CcCCCCCCchHHHHHHHcCCH-HHHHHHHhcCCCCCCCCCC
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEGCS--------VSEPDGLGYYALQWAALNNRT-AAAQYIIEHGGDVNAADHT 103 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~--------~~~~d~~g~t~Lh~Aa~~g~~-~~v~~Ll~~gad~n~~~~~ 103 (634)
++.+..++|+.||+.|+.++|+.||+ .+.+ ++..+..|.||||+|+..+.. +++++|++.|+++|.+|.+
T Consensus 7 kd~~~~~~L~~A~~~G~~~~v~~LL~-~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~ 85 (269)
T 4b93_B 7 KDYREVEKLLRAVADGDLEMVRYLLE-WTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQD 85 (269)
T ss_dssp CCCHHHHHHHHHHHTTCHHHHHHHHT-CC----------------------------------------CCCCTTCCCTT
T ss_pred cCccchhHHHHHHHcCCHHHHHHHHH-CCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCC
Confidence 45567899999999999999999998 4432 456778899999999988875 4889999999999999999
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCC
Q 006702 104 GQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGF 183 (634)
Q Consensus 104 g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~ 183 (634)
|.||||+|+..|+.++|++|++.|++++.++..|.||++.|+..++.++++.|++. |++++.+|..|.||||+|+..|+
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-g~~~n~~d~~g~TpL~~A~~~g~ 164 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDS-NAKPNKKDLSGNTPLIYACSGGH 164 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999988 99999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHH
Q 006702 184 ADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFL 258 (634)
Q Consensus 184 ~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L 258 (634)
.+++++|++.|++++.+|..|.||||+|+..|+.++|++|+++| +|++.+|..|+||||+|+++++ ++++|
T Consensus 165 ~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G--ad~~~~d~~G~TpL~~A~~~~~--i~~lL 235 (269)
T 4b93_B 165 HELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHG--ASVQVLNKRQRTAVDCAEQNSK--IMELL 235 (269)
T ss_dssp GGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT--CCSCCCCTTSCCSGGGSCTTCH--HHHHT
T ss_pred HHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHhCCc--HHHHH
Confidence 99999999999999999999999999999999999999999999 6788999999999999988775 45544
No 12
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=9.4e-38 Score=330.88 Aligned_cols=227 Identities=20% Similarity=0.257 Sum_probs=213.9
Q ss_pred CcccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 006702 30 VVVDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALH 109 (634)
Q Consensus 30 ~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh 109 (634)
....++.+.++||.||..|+.++|++|++ .|++++..|..|.||||+|+..|+.++|++|+++|++++. ..|.||||
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~ 89 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIE-TGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIH 89 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHH
Confidence 34567889999999999999999999998 7899999999999999999999999999999999997655 47999999
Q ss_pred HHHHhCCHHHHHHHHhc----CCCCCc-----------------cccCCChHHHHHHHhC--CHHHHHHHHHccCCCCCC
Q 006702 110 WSAVRGAIQVAELLLRE----GARVNA-----------------ADMYGYQTTHVAAQYG--QTAFLYHIVSKWNADPDV 166 (634)
Q Consensus 110 ~A~~~g~~~iv~~Ll~~----gad~~~-----------------~d~~g~t~L~~Aa~~g--~~~~v~~Ll~~~~~~~~~ 166 (634)
+|+..|+.+++++|+++ |++++. +|..|.||||+|+..| +.+++++|++. |++++.
T Consensus 90 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-ga~~~~ 168 (364)
T 3ljn_A 90 LAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL-GASPTA 168 (364)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH-TCCTTC
T ss_pred HHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc-CCCCcc
Confidence 99999999999999999 888877 8999999999999999 99999999998 999999
Q ss_pred CCCCCChHHHHHHhcCCHHHHHHHhhcCCC-----CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCC
Q 006702 167 PDNDGRSPLHWAAYKGFADCIRLLLFLDAY-----RGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLT 241 (634)
Q Consensus 167 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~-----~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~T 241 (634)
+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.++|++|+++| ++++.+|..|.|
T Consensus 169 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--ad~~~~d~~g~t 246 (364)
T 3ljn_A 169 KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMG--IDVNMEDNEHTV 246 (364)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTT--CCTTCCCTTSCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCC
Confidence 999999999999999999999999999998 9999999999999999999999999999999 678899999999
Q ss_pred HHHHHHhcCcHHHHHHHHHHH
Q 006702 242 PAQLASDKNHRQVAFFLGNAR 262 (634)
Q Consensus 242 pl~~A~~~~~~~i~~~L~~~~ 262 (634)
||++|+..++.+++++|.+.+
T Consensus 247 pL~~A~~~g~~~~v~~Ll~~~ 267 (364)
T 3ljn_A 247 PLYLSVRAAMVLLTKELLQKT 267 (364)
T ss_dssp HHHHHHHTCCHHHHHHHHHHS
T ss_pred HHHHHHHhChHHHHHHHHHcC
Confidence 999999999999999997754
No 13
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4e-37 Score=334.12 Aligned_cols=228 Identities=29% Similarity=0.323 Sum_probs=213.0
Q ss_pred CcccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 006702 30 VVVDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALH 109 (634)
Q Consensus 30 ~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh 109 (634)
....++.+.||||.||..|+.++|++|++ .|++++..+..|.||||+|+..|+.+++++|+++|+++|.++..|.||||
T Consensus 7 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 85 (437)
T 1n11_A 7 GGGGGESGLTPLHVASFMGHLPIVKNLLQ-RGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLH 85 (437)
T ss_dssp --------CCHHHHHHHHTCHHHHHHHHH-TTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHH
T ss_pred ccccCCCCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 34567889999999999999999999999 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHH
Q 006702 110 WSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRL 189 (634)
Q Consensus 110 ~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~ 189 (634)
+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++. +.+.+..+..|.||||+|+..|+.+++++
T Consensus 86 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 164 (437)
T 1n11_A 86 CAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK-EASQACMTKKGFTPLHVAAKYGKVRVAEL 164 (437)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCcCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999988 89999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHH
Q 006702 190 LLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNA 261 (634)
Q Consensus 190 Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~ 261 (634)
|++.|++++..|..|.||||+|+..|+.+++++|+++| .+++..+..|.|||++|+..++.+++++|.+.
T Consensus 165 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 234 (437)
T 1n11_A 165 LLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRG--GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQY 234 (437)
T ss_dssp HHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGT--CCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999999999999999999999999999 56778899999999999999999999998654
No 14
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.4e-37 Score=316.23 Aligned_cols=216 Identities=24% Similarity=0.239 Sum_probs=186.0
Q ss_pred ccccchhhHHHHHHHcCCHHHHHHHHhccCCC---CcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q 006702 32 VDEESLRNDVYTAAAYGDLEKLQRLVECEGCS---VSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTAL 108 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~---~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpL 108 (634)
..++.+.||||.|++.|+.+++++|++ .+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.|||
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL 82 (282)
T 1oy3_D 4 YVTEDGDTALHLAVIHQHEPFLDFLLG-FSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL 82 (282)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHH-HHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 457789999999999999999999998 5666 888999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHhcCCC-----------------------------------------------CCccccCCChHH
Q 006702 109 HWSAVRGAIQVAELLLREGAR-----------------------------------------------VNAADMYGYQTT 141 (634)
Q Consensus 109 h~A~~~g~~~iv~~Ll~~gad-----------------------------------------------~~~~d~~g~t~L 141 (634)
|+|+..|+.+++++|+++|++ ++.+|..|.|||
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 162 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHH
Confidence 999999999999999998865 667788899999
Q ss_pred HHHHHhCCHHHHHHHHHccCCCCCCCCCC-CChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 006702 142 HVAAQYGQTAFLYHIVSKWNADPDVPDND-GRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEAC 220 (634)
Q Consensus 142 ~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~-g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv 220 (634)
|+|+..|+.+++++|++. |++++.++.. |.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++
T Consensus 163 ~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v 241 (282)
T 1oy3_D 163 HVAVIHKDAEMVRLLRDA-GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILA 241 (282)
T ss_dssp HHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHH
T ss_pred HHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHH
Confidence 999999999999999987 8999988854 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCccccCCCCCCHHHHHHhcCc
Q 006702 221 TVLVQAGKKEDLMVTDNTGLTPAQLASDKNH 251 (634)
Q Consensus 221 ~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~ 251 (634)
++|+++| ++++.+|..|.||+++|.....
T Consensus 242 ~~Ll~~g--a~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 242 RLLRAHG--APEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHHHTT--CCCCCCC---------------
T ss_pred HHHHHcC--CCcCcCCCcccccccccCCccc
Confidence 9999999 5778899999999999987654
No 15
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-36 Score=330.49 Aligned_cols=224 Identities=25% Similarity=0.374 Sum_probs=173.5
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAV 113 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~ 113 (634)
+..+.++|+.|+..|+.++++.|++ .+++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus 143 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 221 (437)
T 1n11_A 143 TKKGFTPLHVAAKYGKVRVAELLLE-RDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAK 221 (437)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHH
Confidence 4456677777777777777777777 677777777777777777777777777777777777777777777777777777
Q ss_pred hCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhc
Q 006702 114 RGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFL 193 (634)
Q Consensus 114 ~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 193 (634)
.|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++ +++++..|..|.||||+|+..|+.+++++|++.
T Consensus 222 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 300 (437)
T 1n11_A 222 QNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSK-QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKH 300 (437)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 7777777777777777777777777888888888888887777776 777777777788888888888888888888888
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHH
Q 006702 194 DAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNA 261 (634)
Q Consensus 194 ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~ 261 (634)
|++++.+|..|.||||+|+..|+.++|++|+++| ++++.+|..|.||||+|+..++.+++++|.+.
T Consensus 301 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--ad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ 366 (437)
T 1n11_A 301 GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ--ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN 366 (437)
T ss_dssp TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC--CCCCCCCCCCCCHHHHHHHCChHHHHHHHHHC
Confidence 8888777778888888888888888888888877 56677777788888888888888887776553
No 16
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=6.8e-38 Score=322.10 Aligned_cols=223 Identities=27% Similarity=0.378 Sum_probs=205.7
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSA 112 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~ 112 (634)
.+..+.++|+.|+..|+.+.++.|++ .|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLE-RGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAA 114 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHH-HCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 35568899999999999999999998 78999999999999999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCC--------------------------CC
Q 006702 113 VRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADP--------------------------DV 166 (634)
Q Consensus 113 ~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~--------------------------~~ 166 (634)
..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++++...+.++ ..
T Consensus 115 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (299)
T 1s70_B 115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR 194 (299)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred HcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhh
Confidence 9999999999999999999999999999999999999999988887655543 33
Q ss_pred CCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHH
Q 006702 167 PDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLA 246 (634)
Q Consensus 167 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A 246 (634)
.+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g--ad~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL--CDMEAVNKVGQTAFDVA 272 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCTTTSC
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHH
Confidence 6778999999999999999999999999999999999999999999999999999999999 67889999999999999
Q ss_pred HhcCcHHHHHHH
Q 006702 247 SDKNHRQVAFFL 258 (634)
Q Consensus 247 ~~~~~~~i~~~L 258 (634)
++.....+.+++
T Consensus 273 ~~~~~~~l~~l~ 284 (299)
T 1s70_B 273 DEDILGYLEELQ 284 (299)
T ss_dssp CSGGGHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 876544444443
No 17
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=311.55 Aligned_cols=242 Identities=17% Similarity=0.207 Sum_probs=195.6
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhcc----------CCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECE----------GCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHT 103 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~----------~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~ 103 (634)
...+.++||.|+..|+.+.+..++... ...++..|..|.||||+|+..|+.+++++|++.|++++.+|..
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~ 91 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITAD 91 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTT
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 346889999999999988888876532 1235678899999999999999999999999999999999999
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCC
Q 006702 104 GQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGF 183 (634)
Q Consensus 104 g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~ 183 (634)
|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. +++++..+ .|.||||+|+..|+
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~-~g~t~L~~A~~~g~ 169 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQH-GASVQPES-DLASPIHEAARRGH 169 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSSCSC-TTSCHHHHHHHHTC
T ss_pred CCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHC-CCCCCCCC-CCCCHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999987 88887644 59999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHH
Q 006702 184 ADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARR 263 (634)
Q Consensus 184 ~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~ 263 (634)
.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|+ +++ .|..|.||||+|+..++.+++++|.+.+.
T Consensus 170 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga--~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 246 (285)
T 3d9h_A 170 VECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGA--DVN-QGKGQDSPLHAVVRTASEELACLLMDFGA 246 (285)
T ss_dssp HHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTC--CTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCC--CCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 999999999999999999999999999999999999999999995 555 48899999999999999999999876543
Q ss_pred -HhcccCCCCCCcccccc
Q 006702 264 -LLDKRCDGNSPIGKISK 280 (634)
Q Consensus 264 -l~~~~~~~~~~~~~~~~ 280 (634)
+..++..+.+|++.+..
T Consensus 247 d~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 247 DTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp CTTCCCTTSCCGGGGSCT
T ss_pred CCCCcCCCCCCHHHHhcC
Confidence 34456677777777663
No 18
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=8.7e-37 Score=300.81 Aligned_cols=216 Identities=23% Similarity=0.308 Sum_probs=200.1
Q ss_pred hhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcC--CCCCC-CCCCCCcHHHHHHH
Q 006702 37 LRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHG--GDVNA-ADHTGQTALHWSAV 113 (634)
Q Consensus 37 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g--ad~n~-~~~~g~tpLh~A~~ 113 (634)
+++|||.|++.|+.+.++.|++......+..|..|.||||+|+..|+.+++++|+++| ++++. .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 4789999999999999999999544445568999999999999999999999999999 56666 78899999999999
Q ss_pred hCCHHHHHHHHhcC--CCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHh
Q 006702 114 RGAIQVAELLLREG--ARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLL 191 (634)
Q Consensus 114 ~g~~~iv~~Ll~~g--ad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 191 (634)
.|+.+++++|+++| ++++.++..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 160 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN-GASVRIKDKFNQIPLHRAASVGSLKLIELLC 160 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999 89999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred hcC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHH
Q 006702 192 FLD-AYRGRQDKEGCTPLHWAAIRGNLEACTVLV-QAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFL 258 (634)
Q Consensus 192 ~~g-a~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll-~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L 258 (634)
+.| ++++.+|..|+||||+|+..|+.+++++|+ ++| ++++.+|..|+||+++|++.+ ++++|
T Consensus 161 ~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~g--a~~~~~~~~g~t~l~~A~~~~---~~~~l 224 (228)
T 2dzn_A 161 GLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYG--AEYDLVDNKGAKAEDVALNEQ---VKKFF 224 (228)
T ss_dssp TTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--CCSCCBCTTSCBGGGGCSSTT---HHHHH
T ss_pred hcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC--CCCCccCCCCCcHHHHHHHHH---HHHHH
Confidence 999 999999999999999999999999999999 888 678899999999999998764 45554
No 19
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=298.11 Aligned_cols=227 Identities=32% Similarity=0.525 Sum_probs=214.2
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCC-CCCcHHHHH
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADH-TGQTALHWS 111 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~-~g~tpLh~A 111 (634)
-++.+.++|+.|++.|+.+.+++|++ .|.+++.++..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A 83 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVE-AGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWA 83 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHH-cCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHH
Confidence 46788899999999999999999999 7899999999999999999999999999999999999886654 599999999
Q ss_pred HHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCC-HHHHHHH
Q 006702 112 AVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGF-ADCIRLL 190 (634)
Q Consensus 112 ~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~-~~~v~~L 190 (634)
+..|+.+++++|++.|++++.++..|.||||.|+..|+.+++++|++. +++++.+|..|.||||+|+..+. .+++++|
T Consensus 84 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L 162 (240)
T 3eu9_A 84 TRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK-GQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL 162 (240)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCSSTTHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhc-CCCccccCCCCCcHHHHHHHhCChHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 99999999999999999997776 7999999
Q ss_pred hhcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHH
Q 006702 191 LFLDAYRGRQDK-EGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARR 263 (634)
Q Consensus 191 l~~ga~~~~~d~-~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~ 263 (634)
++.|++++..+. .|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|++.++.+++++|.+.+.
T Consensus 163 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~ 234 (240)
T 3eu9_A 163 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAG--ANVDAQNIKGESALDLAKQRKNVWMINHLQEARQ 234 (240)
T ss_dssp HHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT--CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC-
T ss_pred HhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhh
Confidence 999999999997 8999999999999999999999999 6788999999999999999999999999976543
No 20
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5.3e-36 Score=314.13 Aligned_cols=225 Identities=26% Similarity=0.331 Sum_probs=208.3
Q ss_pred cccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 006702 31 VVDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHW 110 (634)
Q Consensus 31 ~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~ 110 (634)
...+..+.||||.|+..|+.++++.|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+
T Consensus 52 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~ 130 (351)
T 3utm_A 52 HASDGRKSTPLHLAAGYNRVRIVQLLLQ-HGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHE 130 (351)
T ss_dssp CCSSTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 3456778999999999999999999999 799999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCHHHHHHHHhcCCCCCccc------------------------------------------------------cC
Q 006702 111 SAVRGAIQVAELLLREGARVNAAD------------------------------------------------------MY 136 (634)
Q Consensus 111 A~~~g~~~iv~~Ll~~gad~~~~d------------------------------------------------------~~ 136 (634)
|+..|+.+++++|+++|++++..+ ..
T Consensus 131 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 210 (351)
T 3utm_A 131 AASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQS 210 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTT
T ss_pred HHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCC
Confidence 999999999999999999987654 45
Q ss_pred CChHHHHHHHh---CCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 006702 137 GYQTTHVAAQY---GQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAI 213 (634)
Q Consensus 137 g~t~L~~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~ 213 (634)
|.||||+|+.. +..+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 211 ~~t~L~~A~~~~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~ 289 (351)
T 3utm_A 211 HETALHCAVASLHPKRKQVAELLLRK-GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAAL 289 (351)
T ss_dssp CCCHHHHHHHCCSTTHHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHHhCccHHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 67899999998 557899999987 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHH
Q 006702 214 RGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARR 263 (634)
Q Consensus 214 ~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~ 263 (634)
.|+.++|++|+++| ++++.+|..|.||+++| +.+++++|.+...
T Consensus 290 ~~~~~~v~~Ll~~g--ad~~~~~~~g~tal~~a----~~~~~~~l~~~~~ 333 (351)
T 3utm_A 290 AGHLQTCRLLLSYG--SDPSIISLQGFTAAQMG----NEAVQQILSESTP 333 (351)
T ss_dssp HTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHS----CHHHHHHHHHC--
T ss_pred cCcHHHHHHHHHcC--CCCCCcCCCCCChhhhh----hHHHHHHHHhccc
Confidence 99999999999999 67889999999999998 5678888866543
No 21
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.9e-37 Score=326.93 Aligned_cols=224 Identities=25% Similarity=0.321 Sum_probs=209.5
Q ss_pred cchhhHHHHHHHcCCHHHHHHHHh-------ccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcH
Q 006702 35 ESLRNDVYTAAAYGDLEKLQRLVE-------CEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTA 107 (634)
Q Consensus 35 ~~~~~~L~~Aa~~g~~~~v~~Ll~-------~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tp 107 (634)
..++|+||.|+..|+.++++.|+. ..|++++.+|..|.||||+|+..|+.++|++|+++|++++.++..|.||
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 202 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA 202 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCH
Confidence 679999999999999988888873 4799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCHHHHHHHHhcC---CCCCccccCCChHHHHHHHhC---CHHHHHHHHHccCCCCCC--------CCCCCCh
Q 006702 108 LHWSAVRGAIQVAELLLREG---ARVNAADMYGYQTTHVAAQYG---QTAFLYHIVSKWNADPDV--------PDNDGRS 173 (634)
Q Consensus 108 Lh~A~~~g~~~iv~~Ll~~g---ad~~~~d~~g~t~L~~Aa~~g---~~~~v~~Ll~~~~~~~~~--------~d~~g~t 173 (634)
||+|+..|+.+++++|+++| ++++..|..|.||||+|+..+ +.+++++|++. |++++. .|..|.|
T Consensus 203 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~d~~g~t 281 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEK-GAKVDYDGAARKDSEKYKGRT 281 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH-TCCSSCCSGGGTSSSSCCCCC
T ss_pred HHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHC-CCCcccccccccCcccccCCC
Confidence 99999999999999999998 899999999999999999998 88999999988 888876 6778999
Q ss_pred HHHHHHhcCCHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcH
Q 006702 174 PLHWAAYKGFADCIRLLLFLD-AYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHR 252 (634)
Q Consensus 174 ~Lh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~ 252 (634)
|||+|+..|+.+++++|++.+ ++++.+|..|.||||+|+..|+.++|++|+++| ++++.+|..|.|||++|+..++.
T Consensus 282 ~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g--ad~~~~d~~g~t~l~~A~~~g~~ 359 (373)
T 2fo1_E 282 ALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG--ASVEAVDATDHTARQLAQANNHH 359 (373)
T ss_dssp THHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT--CCSSCCCSSSCCHHHHHHHTTCH
T ss_pred HHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCccCCCCCCCCHHHHHHHcCCH
Confidence 999999999999999999886 999999999999999999999999999999999 67888999999999999999999
Q ss_pred HHHHHHHHH
Q 006702 253 QVAFFLGNA 261 (634)
Q Consensus 253 ~i~~~L~~~ 261 (634)
+++++|.+.
T Consensus 360 ~iv~~Ll~~ 368 (373)
T 2fo1_E 360 NIVDIFDRC 368 (373)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhc
Confidence 999998643
No 22
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.6e-36 Score=298.09 Aligned_cols=211 Identities=28% Similarity=0.371 Sum_probs=193.9
Q ss_pred CCHHHHHHHHhccCCCCcCC-CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhc
Q 006702 48 GDLEKLQRLVECEGCSVSEP-DGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLRE 126 (634)
Q Consensus 48 g~~~~v~~Ll~~~~~~~~~~-d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~ 126 (634)
|+.+++++|++ .|.+++.. |..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 2 g~~~~i~~Ll~-~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 2 DAPAVISDFIY-QGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ---CCEETTEE-TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CcHHHHHHHHH-cCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 67788888888 67777765 88999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCC
Q 006702 127 GA-RVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGC 205 (634)
Q Consensus 127 ga-d~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~ 205 (634)
++ +++.++..|.||||+|+..++.+++++|++. +++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 159 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINS-HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREE 159 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHc-CCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCc
Confidence 87 8899999999999999999999999999987 999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHH
Q 006702 206 TPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNAR 262 (634)
Q Consensus 206 TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~ 262 (634)
||||+|+..|+.+++++|+++| ++++.+|..|.||+++|++.++.+++++|.+.+
T Consensus 160 t~L~~A~~~~~~~~v~~Ll~~g--a~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 160 TPLFLAAREGSYETAKVLLDHF--ANRDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHHcC--CCCccccccCCCHHHHHHHhcchHHHHHHHHcC
Confidence 9999999999999999999999 577889999999999999999999999986543
No 23
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=5.2e-36 Score=301.17 Aligned_cols=224 Identities=24% Similarity=0.242 Sum_probs=167.0
Q ss_pred CCCcCCCCCCchHHHHHHHcC-------------CHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHhCCHHHHHHHHhcC
Q 006702 62 CSVSEPDGLGYYALQWAALNN-------------RTAAAQYIIEHGGDVNA-ADHTGQTALHWSAVRGAIQVAELLLREG 127 (634)
Q Consensus 62 ~~~~~~d~~g~t~Lh~Aa~~g-------------~~~~v~~Ll~~gad~n~-~~~~g~tpLh~A~~~g~~~iv~~Ll~~g 127 (634)
.++|.+|..|.||||+|+..| +.+++++|+++|++++. .|..|.||||+|+..|+.+++++|+++|
T Consensus 1 ~dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 80 (253)
T 1yyh_A 1 MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEAS 80 (253)
T ss_dssp ---------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 367889999999999999977 89999999999999865 4889999999999999999999999999
Q ss_pred CCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcH
Q 006702 128 ARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTP 207 (634)
Q Consensus 128 ad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~Tp 207 (634)
++++.+|..|.||||+|+..|+.+++++|++....+++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||
T Consensus 81 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~ 160 (253)
T 1yyh_A 81 ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSA 160 (253)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 99999999999999999999999999999998555999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHH-HhcccCCCCCCcccccccCcchh
Q 006702 208 LHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARR-LLDKRCDGNSPIGKISKLGLAPA 286 (634)
Q Consensus 208 Lh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~-l~~~~~~~~~~~~~~~~~g~~~l 286 (634)
||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..++.+++++|.+.+. ...++..+.+|++.+.+.|...+
T Consensus 161 L~~A~~~~~~~~v~~Ll~~g--a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i 238 (253)
T 1yyh_A 161 LHWAAAVNNVDAAVVLLKNG--ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDI 238 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHH
Confidence 99999999999999999999 6788899999999999999999999999876542 22344455566666555555554
Q ss_pred H
Q 006702 287 L 287 (634)
Q Consensus 287 ~ 287 (634)
.
T Consensus 239 ~ 239 (253)
T 1yyh_A 239 V 239 (253)
T ss_dssp H
T ss_pred H
Confidence 3
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2e-35 Score=300.45 Aligned_cols=210 Identities=24% Similarity=0.273 Sum_probs=186.6
Q ss_pred CcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCC---CCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChH
Q 006702 64 VSEPDGLGYYALQWAALNNRTAAAQYIIEHGGD---VNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQT 140 (634)
Q Consensus 64 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad---~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~ 140 (634)
++.+|..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp 81 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA 81 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 467899999999999999999999999999998 88999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHccCC-----------------------------------------------CCCCCCCCCCh
Q 006702 141 THVAAQYGQTAFLYHIVSKWNA-----------------------------------------------DPDVPDNDGRS 173 (634)
Q Consensus 141 L~~Aa~~g~~~~v~~Ll~~~~~-----------------------------------------------~~~~~d~~g~t 173 (634)
||+|+..|+.+++++|++. +. +++.+|..|.|
T Consensus 82 L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQP-RPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSS-CCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHHcCCcchhHhhhcc-CCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 9999999999999999976 33 37788999999
Q ss_pred HHHHHHhcCCHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcH
Q 006702 174 PLHWAAYKGFADCIRLLLFLDAYRGRQDKE-GCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHR 252 (634)
Q Consensus 174 ~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~ 252 (634)
|||+|+..|+.+++++|++.|++++.++.. |.||||+|+..|+.++|++|+++| ++++.+|..|.||||+|+..++.
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g--ad~~~~d~~g~tpL~~A~~~~~~ 238 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG--ADPTARMYGGRTPLGSALLRPNP 238 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHTSSCH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC--CCCcccccCCCCHHHHHHHcCCc
Confidence 999999999999999999999999999865 999999999999999999999999 67889999999999999999999
Q ss_pred HHHHHHHHHHH-HhcccCCCCCCcc
Q 006702 253 QVAFFLGNARR-LLDKRCDGNSPIG 276 (634)
Q Consensus 253 ~i~~~L~~~~~-l~~~~~~~~~~~~ 276 (634)
+++++|.+.+. +..++..+.+|+.
T Consensus 239 ~~v~~Ll~~ga~~~~~~~~g~tpl~ 263 (282)
T 1oy3_D 239 ILARLLRAHGAPEPEDGGDKLSPCS 263 (282)
T ss_dssp HHHHHHHHTTCCCCCCC--------
T ss_pred HHHHHHHHcCCCcCcCCCccccccc
Confidence 99999876443 2223334444443
No 25
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=8.6e-35 Score=288.48 Aligned_cols=219 Identities=22% Similarity=0.323 Sum_probs=200.1
Q ss_pred CCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHH
Q 006702 62 CSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTT 141 (634)
Q Consensus 62 ~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L 141 (634)
.+++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.|||
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 81 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCL 81 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHH
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q 006702 142 HVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACT 221 (634)
Q Consensus 142 ~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~ 221 (634)
|+|+..|+.+++++|++..+.+++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.++++
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 161 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAE 161 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHH
Confidence 99999999999999999855999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHH-HhcccCCCCCCcccccccC
Q 006702 222 VLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARR-LLDKRCDGNSPIGKISKLG 282 (634)
Q Consensus 222 ~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~-l~~~~~~~~~~~~~~~~~g 282 (634)
+|+++| ++++.+|..|.||||+|+..++.+++++|.+.+. +..++..+.+|++.+...+
T Consensus 162 ~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 162 ILLAAK--CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp HHHTTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTC
T ss_pred HHHHcC--CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHH
Confidence 999999 6788899999999999999999999999865432 2233445555555555444
No 26
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.6e-34 Score=286.82 Aligned_cols=220 Identities=22% Similarity=0.273 Sum_probs=197.4
Q ss_pred CcCCCCCCchHHHHHHHcCCHHHHHHHHh----cCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCCh
Q 006702 64 VSEPDGLGYYALQWAALNNRTAAAQYIIE----HGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQ 139 (634)
Q Consensus 64 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~----~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t 139 (634)
++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 81 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQT 81 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 35789999999999999999999999997 79999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHccCC----CCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHc
Q 006702 140 TTHVAAQYGQTAFLYHIVSKWNA----DPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQD-KEGCTPLHWAAIR 214 (634)
Q Consensus 140 ~L~~Aa~~g~~~~v~~Ll~~~~~----~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~TpLh~A~~~ 214 (634)
|||+|+..|+.+++++|++. +. +++..|..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 160 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDS-AAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVEN 160 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHH-SCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHc-CCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHc
Confidence 99999999999999999998 54 889999999999999999999999999999999999998 8899999999999
Q ss_pred CCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHH-HhcccCCCCCCcccccccCcchh
Q 006702 215 GNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARR-LLDKRCDGNSPIGKISKLGLAPA 286 (634)
Q Consensus 215 g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~-l~~~~~~~~~~~~~~~~~g~~~l 286 (634)
|+.+++++|+++| ++++.+|..|.||||+|+..++.+++++|.+.+. +..++..+.+|++.+...|...+
T Consensus 161 ~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i 231 (241)
T 1k1a_A 161 NSLSMVQLLLQHG--ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 231 (241)
T ss_dssp TCHHHHHHHHHTT--CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHH
T ss_pred CCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHH
Confidence 9999999999999 6788999999999999999999999999876543 33355667777777766655443
No 27
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.5e-36 Score=319.50 Aligned_cols=247 Identities=21% Similarity=0.198 Sum_probs=210.4
Q ss_pred ccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCC-CCCchHHHHHHHcCCHHHHHHHH--------hcCCCCCCCCC
Q 006702 32 VDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPD-GLGYYALQWAALNNRTAAAQYII--------EHGGDVNAADH 102 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh~Aa~~g~~~~v~~Ll--------~~gad~n~~~~ 102 (634)
..+..+.++||.|+..|+ ++++.|+. .+++..| ..|.||||+|+..|+.+++++|+ +.|+++|.+|.
T Consensus 89 ~~~~~g~t~L~~Aa~~~~-~~~~~L~~---~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~ 164 (373)
T 2fo1_E 89 EPEPESPIKLHTEAAGSY-AITEPITR---ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDC 164 (373)
T ss_dssp -----CCCHHHHHHHSSS-CCCSCCST---TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCT
T ss_pred CCCCCCccHHHHHhcCCc-hHHHHhcc---ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCC
Confidence 346678999999999654 67777754 4678888 78999999999999998887776 88999999999
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccC---CCCCCCCCCCChHHHHHH
Q 006702 103 TGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWN---ADPDVPDNDGRSPLHWAA 179 (634)
Q Consensus 103 ~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~---~~~~~~d~~g~t~Lh~A~ 179 (634)
.|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|++. + .+++..|..|.||||+|+
T Consensus 165 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNS-TKLKGDIEELDRNGMTALMIVA 243 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTS-HHHHHTTSCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhc-CccccChhhcCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987 4 799999999999999999
Q ss_pred hcC---CHHHHHHHhhcCCCCCC--------CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHh
Q 006702 180 YKG---FADCIRLLLFLDAYRGR--------QDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASD 248 (634)
Q Consensus 180 ~~g---~~~~v~~Ll~~ga~~~~--------~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~ 248 (634)
..+ +.+++++|++.|++++. +|..|.||||+|+..|+.++|++|++++. ++++.+|..|.||||+|+.
T Consensus 244 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~-~~~n~~d~~g~TpL~~A~~ 322 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG-SNKDKQDEDGKTPIMLAAQ 322 (373)
T ss_dssp HSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSC-CCTTCCCTTCCCHHHHHHH
T ss_pred HhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcC-CCccCcCCCCCCHHHHHHH
Confidence 998 88999999999999886 67799999999999999999999998863 5788999999999999999
Q ss_pred cCcHHHHHHHHHHHH-HhcccCCCCCCcccccccCcc
Q 006702 249 KNHRQVAFFLGNARR-LLDKRCDGNSPIGKISKLGLA 284 (634)
Q Consensus 249 ~~~~~i~~~L~~~~~-l~~~~~~~~~~~~~~~~~g~~ 284 (634)
.|+.+++++|.+.+. +...+..+.++++.+...|..
T Consensus 323 ~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~ 359 (373)
T 2fo1_E 323 EGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHH 359 (373)
T ss_dssp HTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCH
T ss_pred cCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCH
Confidence 999999999876432 122333344444444444443
No 28
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=4.7e-35 Score=299.90 Aligned_cols=222 Identities=16% Similarity=0.115 Sum_probs=200.9
Q ss_pred cccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 006702 31 VVDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHW 110 (634)
Q Consensus 31 ~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~ 110 (634)
...+..+.||||.|+..|+.++++.|++ .|++++..| |.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 101 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLN-AGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYY 101 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHH
Confidence 4567789999999999999999999999 688888874 8999999999999999999999999999999999999999
Q ss_pred HHHhCCHHHHHHHHhcCCCCCccccCC-ChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHH
Q 006702 111 SAVRGAIQVAELLLREGARVNAADMYG-YQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRL 189 (634)
Q Consensus 111 A~~~g~~~iv~~Ll~~gad~~~~d~~g-~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~ 189 (634)
|+..|+.+++++|+++|++++.+|..| .||||+|+..|+.+++++|++. +.+.... ..|.||||+|+..|+.+++++
T Consensus 102 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~-~~g~t~L~~A~~~g~~~~v~~ 179 (285)
T 3kea_A 102 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPSTFDL-AILLSCIHITIKNGHVDMMIL 179 (285)
T ss_dssp HHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTT-SCTTCCC-STHHHHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCccccc-cCCccHHHHHHHcChHHHHHH
Confidence 999999999999999999999999999 7999999999999999999988 6655222 289999999999999999999
Q ss_pred HhhcCCCCCCCCCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHHHhc
Q 006702 190 LLFLDAYRGRQDKEGCTP-LHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARRLLD 266 (634)
Q Consensus 190 Ll~~ga~~~~~d~~g~Tp-Lh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~l~~ 266 (634)
|++.|++++.+|..|.|| ||+|+..|+.+++++|+++| ++++.+| +.|+..++.+++++|.+.+.-..
T Consensus 180 Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~g--ad~~~~~-------~~a~~~~~~~iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 180 LLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYD--INIYSAN-------LENVLLDDAEIAKMIIEKHVEYK 248 (285)
T ss_dssp HHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSC--BCSTTTT-------GGGGTTTCHHHHHHHHHHHHHHT
T ss_pred HHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcC--CCCCCCC-------hhhhhcCCHHHHHHHHHcCCCCC
Confidence 999999999999999998 99999999999999999999 5666776 35678899999999987765443
No 29
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1e-33 Score=278.04 Aligned_cols=195 Identities=24% Similarity=0.246 Sum_probs=189.2
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCCcHHHHH
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGG-DVNAADHTGQTALHWS 111 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~ga-d~n~~~~~g~tpLh~A 111 (634)
.+..+.++||.|++.|+.++++.|++ .+++++..|..|.||||+|+..|+.+++++|+++++ +++..+..|.||||+|
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A 99 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLE-ASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILA 99 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHH
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHH
Confidence 36678999999999999999999998 799999999999999999999999999999999987 8999999999999999
Q ss_pred HHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHh
Q 006702 112 AVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLL 191 (634)
Q Consensus 112 ~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 191 (634)
+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+
T Consensus 100 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 178 (223)
T 2f8y_A 100 ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPLFLAAREGSYETAKVLL 178 (223)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred hcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 006702 192 FLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKK 229 (634)
Q Consensus 192 ~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~ 229 (634)
+.|++++.+|..|.||||+|+..++.+++++|+++|+.
T Consensus 179 ~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 179 DHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred HcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999954
No 30
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1e-33 Score=296.59 Aligned_cols=220 Identities=24% Similarity=0.242 Sum_probs=196.1
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCC---------------------------------CcCCCCCCchHHHHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCS---------------------------------VSEPDGLGYYALQWAAL 80 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~---------------------------------~~~~d~~g~t~Lh~Aa~ 80 (634)
++.+.||||.||+.|+.++|+.||+ .|++ ++..|..|.||||+|+.
T Consensus 56 ~~~g~TpLh~A~~~g~~~iv~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~ 134 (337)
T 4g8k_A 56 EEGGWTPLHNAVQMSREDIVELLLR-HGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAV 134 (337)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHH
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHH-cCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHH
Confidence 4558999999999999999999998 5554 45667889999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCC----------CCCCCcHHHHHHHhCCHHHHHHHHh-cCCCCCccccCCChHHHHHHHhCC
Q 006702 81 NNRTAAAQYIIEHGGDVNAA----------DHTGQTALHWSAVRGAIQVAELLLR-EGARVNAADMYGYQTTHVAAQYGQ 149 (634)
Q Consensus 81 ~g~~~~v~~Ll~~gad~n~~----------~~~g~tpLh~A~~~g~~~iv~~Ll~-~gad~~~~d~~g~t~L~~Aa~~g~ 149 (634)
.|+.+++++|+++|++++.. +..|.||||+|+..|+.++|++|++ .|++++.+|..|.|+++.++..+.
T Consensus 135 ~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~ 214 (337)
T 4g8k_A 135 YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSD 214 (337)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSC
T ss_pred cCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcC
Confidence 99999999999999988754 3458999999999999999999996 699999999999999999887654
Q ss_pred ----HHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 006702 150 ----TAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFL-DAYRGRQDKEGCTPLHWAAIRGNLEACTVLV 224 (634)
Q Consensus 150 ----~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll 224 (634)
..++++|++. |++++.+|..|.||||+|+..|+.++++.|++. |++++.+|.+|+||||+|+..|+.++|++|+
T Consensus 215 ~~~~~~i~~lLl~~-gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll 293 (337)
T 4g8k_A 215 DSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLC 293 (337)
T ss_dssp TTTHHHHHHHHHHT-TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred cccHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3467777776 999999999999999999999999999999985 8999999999999999999999999999999
Q ss_pred HcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHH
Q 006702 225 QAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNAR 262 (634)
Q Consensus 225 ~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~ 262 (634)
++|+ +++ ..+||++|+..++.+++++|.+.+
T Consensus 294 ~~GA--d~n-----~~~~L~~A~~~~~~~iv~~Ll~~G 324 (337)
T 4g8k_A 294 KRGA--STD-----CGDLVMTARRNYDHSLVKVLLSHG 324 (337)
T ss_dssp TTSC--SST-----TCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HCCC--CCC-----CCCHHHHHHHcCCHHHHHHHHHCc
Confidence 9995 443 456999999999999999986644
No 31
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5.7e-34 Score=287.73 Aligned_cols=207 Identities=19% Similarity=0.261 Sum_probs=188.1
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCC
Q 006702 70 LGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQ 149 (634)
Q Consensus 70 ~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~ 149 (634)
.|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 006702 150 TAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKK 229 (634)
Q Consensus 150 ~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~ 229 (634)
.+++++|++. |++++. +.+|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 82 ~~~v~~Ll~~-g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~- 158 (261)
T 2xai_A 82 WDCVNLLLQH-GASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGA- 158 (261)
T ss_dssp HHHHHHHHHT-TCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTC-
T ss_pred HHHHHHHHHC-CCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCC-
Confidence 9999999988 888885 5569999999999999999999999999999999999999999999999999999999995
Q ss_pred CCccccCCCCCCHHHHHHhcCcHHHHHHHHHHH-HHhcccCCCCCCccccccc
Q 006702 230 EDLMVTDNTGLTPAQLASDKNHRQVAFFLGNAR-RLLDKRCDGNSPIGKISKL 281 (634)
Q Consensus 230 ~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~-~l~~~~~~~~~~~~~~~~~ 281 (634)
+++ .|..|.||||+|+..++.+++++|.+.+ .+..++..+.+|++.+...
T Consensus 159 -~~~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 159 -DVN-QGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp -CTT-CCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred -CCC-CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc
Confidence 555 3889999999999999999999987654 3334556677777666543
No 32
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=8.6e-34 Score=273.86 Aligned_cols=193 Identities=22% Similarity=0.272 Sum_probs=149.3
Q ss_pred cchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q 006702 35 ESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVR 114 (634)
Q Consensus 35 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~ 114 (634)
+...++|+.|+..|+.+.++.|++..+.+++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 34567788888888888888877766667777777778888888888888888888888888777777778888888888
Q ss_pred CCHHHHHHHH-hcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCC-----HHHHH
Q 006702 115 GAIQVAELLL-REGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGF-----ADCIR 188 (634)
Q Consensus 115 g~~~iv~~Ll-~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~-----~~~v~ 188 (634)
|+.+++++|+ ..+++++.+|..|.||||.|+..|+.+++++|++..+++++.+|..|.||||+|+..+. .++++
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~ 162 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVK 162 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHH
T ss_pred CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHH
Confidence 8888888777 55667777777777888888887888887777777337777777777788888777776 77777
Q ss_pred HHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 006702 189 LLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAG 227 (634)
Q Consensus 189 ~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g 227 (634)
+|++.|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 163 ~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 163 LLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 777777777777777778888888777788887777765
No 33
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=4.8e-34 Score=282.27 Aligned_cols=206 Identities=29% Similarity=0.377 Sum_probs=146.3
Q ss_pred hhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCC-----CCCCCCCCcHHHHH
Q 006702 37 LRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDV-----NAADHTGQTALHWS 111 (634)
Q Consensus 37 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~-----n~~~~~g~tpLh~A 111 (634)
++||||.|++.|+.+.++.|++..+.+++.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A 82 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA 82 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence 5678888888888888888887557888888888888888888888888888888888776 56667788888888
Q ss_pred HHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHh
Q 006702 112 AVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLL 191 (634)
Q Consensus 112 ~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 191 (634)
+..|+.+++++|+++|++++.++.... .....+..|..|.||||+|+..|+.+++++|+
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~---------------------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 141 (232)
T 2rfa_A 83 VINQNVNLVRALLARGASVSARATGSV---------------------FHYRPHNLIYYGEHPLSFAACVGSEEIVRLLI 141 (232)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCSGG---------------------GSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCCcccCCcc---------------------eeecccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 888888888888888888877654210 01223344556677777777777777777777
Q ss_pred hcCCCCCCCCCCCCcHHHHHHHcCCHHHH----HHHHHcCCCCCc----cccCCCCCCHHHHHHhcCcHHHHHHHHHHHH
Q 006702 192 FLDAYRGRQDKEGCTPLHWAAIRGNLEAC----TVLVQAGKKEDL----MVTDNTGLTPAQLASDKNHRQVAFFLGNARR 263 (634)
Q Consensus 192 ~~ga~~~~~d~~g~TpLh~A~~~g~~~iv----~~Ll~~g~~~d~----~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~ 263 (634)
+.|++++.+|..|.||||+|+..|+.+++ ++|+++|++.+. +.+|..|.|||++|++.|+.+++++|.+.+.
T Consensus 142 ~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~ 221 (232)
T 2rfa_A 142 EHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRK 221 (232)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 77777777777777777777777766666 666666643221 4566667777777777777777766665544
No 34
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.1e-34 Score=295.00 Aligned_cols=232 Identities=15% Similarity=0.058 Sum_probs=203.7
Q ss_pred HHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHH
Q 006702 44 AAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELL 123 (634)
Q Consensus 44 Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~L 123 (634)
++...+.+.++.+|.+. +++.+|..|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|
T Consensus 6 ~i~~~~~~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~L 81 (285)
T 3kea_A 6 RINTWKSKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKIL 81 (285)
T ss_dssp TGGGCCHHHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHH
T ss_pred HHHhcCHHHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHH
Confidence 34567777788888744 688999999999999999999999999999999999884 89999999999999999999
Q ss_pred HhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCC-ChHHHHHHhcCCHHHHHHHhhcCCCCCCCCC
Q 006702 124 LREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDG-RSPLHWAAYKGFADCIRLLLFLDAYRGRQDK 202 (634)
Q Consensus 124 l~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g-~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~ 202 (634)
+++|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..| .||||+|+..|+.+++++|++.|++.... .
T Consensus 82 l~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~ 159 (285)
T 3kea_A 82 LFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-A 159 (285)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-S
T ss_pred HHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-c
Confidence 999999999999999999999999999999999998 99999999999 89999999999999999999999877332 2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCH-HHHHHhcCcHHHHHHHHHHHHHhcccCCCCCCccccccc
Q 006702 203 EGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTP-AQLASDKNHRQVAFFLGNARRLLDKRCDGNSPIGKISKL 281 (634)
Q Consensus 203 ~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tp-l~~A~~~~~~~i~~~L~~~~~l~~~~~~~~~~~~~~~~~ 281 (634)
.|.||||+|+..|+.+++++|+++| ++++.+|..|.|| ||+|+..++.+++++|. +.+.+.+..-..+...
T Consensus 160 ~g~t~L~~A~~~g~~~~v~~Ll~~g--ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll------~~gad~~~~~~~a~~~ 231 (285)
T 3kea_A 160 ILLSCIHITIKNGHVDMMILLLDYM--TSTNTNNSLLFIPDIKLAIDNKDIEMLQALF------KYDINIYSANLENVLL 231 (285)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHH--HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHT------TSCBCSTTTTGGGGTT
T ss_pred CCccHHHHHHHcChHHHHHHHHHcC--CCCCcccCCCCChHHHHHHHcCCHHHHHHHH------HcCCCCCCCChhhhhc
Confidence 8999999999999999999999999 6788999999998 99999999999999964 3455554443344444
Q ss_pred CcchhHHH
Q 006702 282 GLAPALWC 289 (634)
Q Consensus 282 g~~~l~~~ 289 (634)
|...++-+
T Consensus 232 ~~~~iv~~ 239 (285)
T 3kea_A 232 DDAEIAKM 239 (285)
T ss_dssp TCHHHHHH
T ss_pred CCHHHHHH
Confidence 55444433
No 35
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.7e-35 Score=293.86 Aligned_cols=216 Identities=20% Similarity=0.187 Sum_probs=192.0
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhcc---CCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECE---GCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALH 109 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~---~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh 109 (634)
.++.+.|+||.|+..|+.++++.|++.. +.+++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 83 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLH 83 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 4677899999999999999999999832 2378999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHhcCCC------CCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCC-CCChHHHHHHhcC
Q 006702 110 WSAVRGAIQVAELLLREGAR------VNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDN-DGRSPLHWAAYKG 182 (634)
Q Consensus 110 ~A~~~g~~~iv~~Ll~~gad------~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-~g~t~Lh~A~~~g 182 (634)
+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|++. |++++.++. .|.||||+|+..|
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 84 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL-GADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHHcC
Confidence 99999999999999999876 467788899999999999999999999987 999999998 9999999999999
Q ss_pred CHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhc
Q 006702 183 FADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDK 249 (634)
Q Consensus 183 ~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~ 249 (634)
+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++.....++.+|.||.+.+.+.
T Consensus 163 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 163 NPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp CHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC---
T ss_pred CHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhccc
Confidence 9999999999999999999999999999999999999999999997666668888898887766543
No 36
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.6e-33 Score=278.55 Aligned_cols=199 Identities=19% Similarity=0.209 Sum_probs=161.0
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCC-----CccccCCChHHHH
Q 006702 70 LGYYALQWAALNNRTAAAQYIIEH-GGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARV-----NAADMYGYQTTHV 143 (634)
Q Consensus 70 ~g~t~Lh~Aa~~g~~~~v~~Ll~~-gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~-----~~~d~~g~t~L~~ 143 (634)
.|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 478999999999999999999987 8999999999999999999999999999999998876 4555667777777
Q ss_pred HHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 006702 144 AAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVL 223 (634)
Q Consensus 144 Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~L 223 (634)
|+..|+.+++++|++. |++++.++.... .....+..|..|.||||+|+..|+.+++++|
T Consensus 82 A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~--------------------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 140 (232)
T 2rfa_A 82 AVINQNVNLVRALLAR-GASVSARATGSV--------------------FHYRPHNLIYYGEHPLSFAACVGSEEIVRLL 140 (232)
T ss_dssp HHHTTCHHHHHHHHHT-TCCTTCCCCSGG--------------------GSCCTTCSCCCCSSHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhC-CCCCCcccCCcc--------------------eeecccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 7777777777766665 666666554321 0113445566899999999999999999999
Q ss_pred HHcCCCCCccccCCCCCCHHHHHHhcCcHHHH----HHHHHHHHH-------hcccCCCCCCcccccccCcchhHHHHH
Q 006702 224 VQAGKKEDLMVTDNTGLTPAQLASDKNHRQVA----FFLGNARRL-------LDKRCDGNSPIGKISKLGLAPALWCVI 291 (634)
Q Consensus 224 l~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~----~~L~~~~~l-------~~~~~~~~~~~~~~~~~g~~~l~~~~i 291 (634)
+++| ++++.+|..|.||||+|+..++.+++ ++|.+.+.. ..++..+.+|++.+...|...++..++
T Consensus 141 l~~g--a~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll 217 (232)
T 2rfa_A 141 IEHG--ADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLM 217 (232)
T ss_dssp HHTT--CCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHCC--CCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999 67889999999999999999999988 787765542 256778999999999999888776654
No 37
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=5e-33 Score=268.51 Aligned_cols=191 Identities=25% Similarity=0.253 Sum_probs=182.7
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHH
Q 006702 68 DGLGYYALQWAALNNRTAAAQYIIEHGG-DVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQ 146 (634)
Q Consensus 68 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~ga-d~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~ 146 (634)
+..+.||||.|+..|+.+.++.|++.+. +++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGA 81 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 3568899999999999999999999876 999999999999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHcCC-----HHHH
Q 006702 147 YGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLD-AYRGRQDKEGCTPLHWAAIRGN-----LEAC 220 (634)
Q Consensus 147 ~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~TpLh~A~~~g~-----~~iv 220 (634)
.|+.+++++|++..+.+++.+|..|.||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..++ .+++
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 999999999998879999999999999999999999999999999999 9999999999999999999998 9999
Q ss_pred HHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHH
Q 006702 221 TVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGN 260 (634)
Q Consensus 221 ~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~ 260 (634)
++|+++| ++++.+|..|.|||++|+..++.+++++|.+
T Consensus 162 ~~Ll~~g--a~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 199 (201)
T 3hra_A 162 KLLMENG--ADQSIKDNSGRTAMDYANQKGYTEISKILAQ 199 (201)
T ss_dssp HHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred HHHHHCC--CCCCccCCCCCCHHHHHHHcCCHhHHHHHHh
Confidence 9999999 6788999999999999999999999999853
No 38
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.7e-33 Score=277.99 Aligned_cols=195 Identities=25% Similarity=0.319 Sum_probs=189.0
Q ss_pred ccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 006702 32 VDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWS 111 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A 111 (634)
..+..+.++||.|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|
T Consensus 35 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 113 (231)
T 3aji_A 35 RTDQDSRTALHWACSAGHTEIVEFLLQ-LGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYA 113 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHH-hCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 346678999999999999999999998 7999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHh
Q 006702 112 AVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLL 191 (634)
Q Consensus 112 ~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 191 (634)
+..|+.+++++|+++|++++.+|..|.||||.|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+
T Consensus 114 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 192 (231)
T 3aji_A 114 ASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY-KASTNIQDTEGNTPLHLACDEERVEEAKFLV 192 (231)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987 9999999999999999999999999999999
Q ss_pred hcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 006702 192 FLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGK 228 (634)
Q Consensus 192 ~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~ 228 (634)
+.|++++.+|..|.||||+|+..++.+++++|+++|+
T Consensus 193 ~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 193 TQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEA 229 (231)
T ss_dssp HTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence 9999999999999999999999999999999999873
No 39
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.4e-33 Score=275.10 Aligned_cols=210 Identities=23% Similarity=0.271 Sum_probs=188.4
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHhCCHHHHHHHHhcC--CCCCc-cccCCChHHHHHHH
Q 006702 71 GYYALQWAALNNRTAAAQYIIEHGGDVNA-ADHTGQTALHWSAVRGAIQVAELLLREG--ARVNA-ADMYGYQTTHVAAQ 146 (634)
Q Consensus 71 g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~-~~~~g~tpLh~A~~~g~~~iv~~Ll~~g--ad~~~-~d~~g~t~L~~Aa~ 146 (634)
|.||||+|+..|+.+++++|++.++++.. .|..|.||||+|+..|+.+++++|+++| ++++. .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 78999999999999999999999988654 8899999999999999999999999999 55555 78999999999999
Q ss_pred hCCHHHHHHHHHccC--CCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 006702 147 YGQTAFLYHIVSKWN--ADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLV 224 (634)
Q Consensus 147 ~g~~~~v~~Ll~~~~--~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll 224 (634)
.|+.+++++|++. + .+++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+
T Consensus 82 ~~~~~~~~~Ll~~-g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 160 (228)
T 2dzn_A 82 VGNLEVVKSLYDR-PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC 160 (228)
T ss_dssp HCCHHHHHHHHSS-SSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHhC-CCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999987 6 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHH-HHH-HHhcccCCCCCCcccccccC
Q 006702 225 QAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLG-NAR-RLLDKRCDGNSPIGKISKLG 282 (634)
Q Consensus 225 ~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~-~~~-~l~~~~~~~~~~~~~~~~~g 282 (634)
++|. .+++.+|..|.||||+|+..++.+++++|. +.+ .+..++..+.+|++.+.+.+
T Consensus 161 ~~g~-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 161 GLGK-SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp TTTC-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTT
T ss_pred hcCc-ccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHH
Confidence 9983 578889999999999999999999999987 433 33345556667776665543
No 40
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4.5e-34 Score=302.59 Aligned_cols=224 Identities=20% Similarity=0.207 Sum_probs=202.7
Q ss_pred ccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhc----CCCCCC--------
Q 006702 32 VDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEH----GGDVNA-------- 99 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~----gad~n~-------- 99 (634)
..+..+.||||.|+..|+.++++.|++ .+.+++. ..|.||||+|+..|+.+++++|+++ |++++.
T Consensus 48 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 124 (364)
T 3ljn_A 48 IQNRFGCTALHLACKFGCVDTAKYLAS-VGEVHSL--WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDER 124 (364)
T ss_dssp CCCTTCCCHHHHHHHHCCHHHHHHHHH-HCCCCCC--BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCC
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHH-CCCCccc--cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchH
Confidence 456778999999999999999999999 6664443 4799999999999999999999998 888777
Q ss_pred ---------CCCCCCcHHHHHHHhC--CHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCC-----
Q 006702 100 ---------ADHTGQTALHWSAVRG--AIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNAD----- 163 (634)
Q Consensus 100 ---------~~~~g~tpLh~A~~~g--~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~----- 163 (634)
++..|.||||+|+..| +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. +++
T Consensus 125 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~ 203 (364)
T 3ljn_A 125 EVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDT-VPSKSSLR 203 (364)
T ss_dssp CEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CSCSSSCC
T ss_pred hhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhc-cccccccc
Confidence 8889999999999999 99999999999999999999999999999999999999999987 777
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC----------cc
Q 006702 164 PDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKED----------LM 233 (634)
Q Consensus 164 ~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d----------~~ 233 (634)
++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.++|++|+++|++.+ ..
T Consensus 204 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 283 (364)
T 3ljn_A 204 LDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTV 283 (364)
T ss_dssp TTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSB
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999984321 12
Q ss_pred ccCCCCCCHHHHHHhcCcHHHHHHHH
Q 006702 234 VTDNTGLTPAQLASDKNHRQVAFFLG 259 (634)
Q Consensus 234 ~~d~~g~Tpl~~A~~~~~~~i~~~L~ 259 (634)
..+..+.||++.|+..++.+.+..|.
T Consensus 284 ~~~~~~~~~l~~aa~~~~~~~v~~ll 309 (364)
T 3ljn_A 284 LPDRVVWLDFVPAAADPSKQEVLQLL 309 (364)
T ss_dssp CGGGCCCCTTSCSSCCHHHHHHHHHH
T ss_pred cccccccccchhhhhccCHHHHHHHH
Confidence 35678899999999998776555543
No 41
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=6.6e-33 Score=261.10 Aligned_cols=156 Identities=38% Similarity=0.519 Sum_probs=104.9
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHH
Q 006702 74 ALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFL 153 (634)
Q Consensus 74 ~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v 153 (634)
+|+.||..|+.++|++|+++|+|+|.+|..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+.+++
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v 86 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVV 86 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHH
Confidence 46666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 006702 154 YHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKE 230 (634)
Q Consensus 154 ~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~ 230 (634)
++|++. |++++.+|.+|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 87 ~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 87 KLLISK-GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHHHHC-cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 666665 6666666777777777777777777777777777777777777777777777777777777777777443
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.7e-33 Score=286.73 Aligned_cols=235 Identities=23% Similarity=0.277 Sum_probs=205.1
Q ss_pred HHHHcCCHHHHHHHHhccCCCCc---------CCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 006702 43 TAAAYGDLEKLQRLVECEGCSVS---------EPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAV 113 (634)
Q Consensus 43 ~Aa~~g~~~~v~~Ll~~~~~~~~---------~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~ 113 (634)
.+++.+..+.++.++.+. .++. ..+..|.||||.||..|+.+++++|+++|+++|..|..|.||||+|+.
T Consensus 4 ~~a~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSE-TDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHHHHHTT-TSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHH
T ss_pred hHHHHHHHHHHHHHHccc-cccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 577888888888888743 2221 123457899999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhh-
Q 006702 114 RGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLF- 192 (634)
Q Consensus 114 ~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~- 192 (634)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++..|..|.||||+|+..++.++++.++.
T Consensus 83 ~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~ 161 (299)
T 1s70_B 83 DDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQ-GAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR 161 (299)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999998 99999999999999999999999999987764
Q ss_pred cCCCC--------------------------CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHH
Q 006702 193 LDAYR--------------------------GRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLA 246 (634)
Q Consensus 193 ~ga~~--------------------------~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A 246 (634)
.+.++ ...+..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~d~~~~d~~g~tpL~~A 239 (299)
T 1s70_B 162 QGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR--YDVNIKDYDGWTPLHAA 239 (299)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT--CCTTCCCTTCCCHHHHH
T ss_pred cCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC--CCCCCcCCCCCcHHHHH
Confidence 34443 235678999999999999999999999999 67889999999999999
Q ss_pred HhcCcHHHHHHHHHHHH-HhcccCCCCCCccccccc
Q 006702 247 SDKNHRQVAFFLGNARR-LLDKRCDGNSPIGKISKL 281 (634)
Q Consensus 247 ~~~~~~~i~~~L~~~~~-l~~~~~~~~~~~~~~~~~ 281 (634)
+..++.+++++|.+.+. +...+..+.+|++.+.+.
T Consensus 240 ~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 240 AHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG
T ss_pred HhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH
Confidence 99999999999876543 344566777888777553
No 43
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-33 Score=284.21 Aligned_cols=215 Identities=22% Similarity=0.228 Sum_probs=166.9
Q ss_pred cCCCCCCchHHHHHHHcCCHHHHHHHHhcCCC--------CCCCCCCCCcHHHHHHHhCCH-HHHHHHHhcCCCCCcccc
Q 006702 65 SEPDGLGYYALQWAALNNRTAAAQYIIEHGGD--------VNAADHTGQTALHWSAVRGAI-QVAELLLREGARVNAADM 135 (634)
Q Consensus 65 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad--------~n~~~~~g~tpLh~A~~~g~~-~iv~~Ll~~gad~~~~d~ 135 (634)
..+|..+.++|+.||..|+.++|++|++.|++ ++..+..|.|||+.|+..+.. .++++|++.|++++.+|.
T Consensus 5 ~kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~ 84 (269)
T 4b93_B 5 TKKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQ 84 (269)
T ss_dssp --CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCT
T ss_pred cccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCC
Confidence 34677788999999999999999999999875 456677899999999988776 488999999999999999
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcC
Q 006702 136 YGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRG 215 (634)
Q Consensus 136 ~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g 215 (634)
.|.||||+|+..|+.+++++|++. +++++.++..|.||+|+|+..++.+++++|++.|++++.+|..|.||||+|+..|
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~-~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKH-GANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGG 163 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhc-CCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence 999999999999999999999987 9999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHH-HHhcccCCCCCCcccccccC
Q 006702 216 NLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNAR-RLLDKRCDGNSPIGKISKLG 282 (634)
Q Consensus 216 ~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~-~l~~~~~~~~~~~~~~~~~g 282 (634)
+.++|++|+++| ++++.+|..|.||||+|+..|+.+++++|.+.+ .+..++..+.+|++.+.+.+
T Consensus 164 ~~~~v~~Ll~~g--advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 164 HHELVALLLQHG--ASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp CGGGHHHHHHTT--CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTC
T ss_pred CHHHHHHHHHCC--CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCC
Confidence 999999999999 678899999999999999999999999987654 23344556667776665443
No 44
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=9.3e-34 Score=287.83 Aligned_cols=211 Identities=23% Similarity=0.245 Sum_probs=167.0
Q ss_pred cccccchhhHHHHHHHcCCHHHHHHHHh---ccCCCCc----CCCCCCchHHHHHHHc---CCHHHHHHHHhcCCCC---
Q 006702 31 VVDEESLRNDVYTAAAYGDLEKLQRLVE---CEGCSVS----EPDGLGYYALQWAALN---NRTAAAQYIIEHGGDV--- 97 (634)
Q Consensus 31 ~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~---~~~~~~~----~~d~~g~t~Lh~Aa~~---g~~~~v~~Ll~~gad~--- 97 (634)
...+..++++||.||+.|+.++|+.|++ ..+.+++ ..|..|.||||+|+.. |+.+++++|+++|+++
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 3457788999999999999999999887 3566665 4578899999999987 9999999999988652
Q ss_pred ----CC----CCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCcccc--------------CCChHHHHHHHhCCHHHHHH
Q 006702 98 ----NA----ADHTGQTALHWSAVRGAIQVAELLLREGARVNAADM--------------YGYQTTHVAAQYGQTAFLYH 155 (634)
Q Consensus 98 ----n~----~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~--------------~g~t~L~~Aa~~g~~~~v~~ 155 (634)
|. .|..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 166 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF 166 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 32 566899999999999999999999999999999887 78888888888888888888
Q ss_pred HHHc--cCCCCCCCCCCCChHHHHHHhcCC---------HHHHHHHhhcCCCCC-------CCCCCCCcHHHHHHHcCCH
Q 006702 156 IVSK--WNADPDVPDNDGRSPLHWAAYKGF---------ADCIRLLLFLDAYRG-------RQDKEGCTPLHWAAIRGNL 217 (634)
Q Consensus 156 Ll~~--~~~~~~~~d~~g~t~Lh~A~~~g~---------~~~v~~Ll~~ga~~~-------~~d~~g~TpLh~A~~~g~~ 217 (634)
|++. .|++++.+|..|+||||+|+..|+ .+++++|++.|++++ .+|..|.||||+|+..|+.
T Consensus 167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~ 246 (273)
T 2pnn_A 167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKI 246 (273)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChH
Confidence 8883 388888888888888888888887 788888888888886 4788888888888888888
Q ss_pred HHHHHHHHcCCCCCccccCCCCCCH
Q 006702 218 EACTVLVQAGKKEDLMVTDNTGLTP 242 (634)
Q Consensus 218 ~iv~~Ll~~g~~~d~~~~d~~g~Tp 242 (634)
+++++|+++|++ |.......+.+|
T Consensus 247 ~iv~~Ll~~ga~-dp~~~~~~~~~~ 270 (273)
T 2pnn_A 247 GVLAYILQREIH-EPECRHAAAHHH 270 (273)
T ss_dssp HHHHHHHHHHTC-------------
T ss_pred HHHHHHHHCCCC-Cchhhhhhhhhc
Confidence 888888888852 555555555444
No 45
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.3e-33 Score=281.96 Aligned_cols=202 Identities=23% Similarity=0.246 Sum_probs=126.6
Q ss_pred hhhHHHHHHHcCCHHHH----HHHHhccCCCCcC----CCCCCchHHHHHHHc---CCHHHHHHHHhcCCCCCCC-----
Q 006702 37 LRNDVYTAAAYGDLEKL----QRLVECEGCSVSE----PDGLGYYALQWAALN---NRTAAAQYIIEHGGDVNAA----- 100 (634)
Q Consensus 37 ~~~~L~~Aa~~g~~~~v----~~Ll~~~~~~~~~----~d~~g~t~Lh~Aa~~---g~~~~v~~Ll~~gad~n~~----- 100 (634)
++++||.||+.|+.+.+ ++|++ .+.+++. .|..|.||||+|+.. |+.+++++|+++|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~-~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRW-NSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHH-HTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHH-cCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 56788888888888744 44444 6778887 788888888888888 8888888888887766533
Q ss_pred ------CCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChH
Q 006702 101 ------DHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSP 174 (634)
Q Consensus 101 ------~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~ 174 (634)
|..|.||||+|+..|+.+++++|+++|++++.++..+.. ..+.+..|..|.||
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~---------------------~~~~~~~~~~g~tp 139 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFF---------------------QKHQGTCFYFGELP 139 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGG---------------------SCCSSSCCCSCSSH
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccc---------------------cccccccccCCCCH
Confidence 356888888888888888888888888888877765210 11122222335555
Q ss_pred HHHHHhcCCHHHHHHHhh---cCCCCCCCCCCCCcHHHHHHH--cCCHH-------HHHHHHHcCCCCCc-------ccc
Q 006702 175 LHWAAYKGFADCIRLLLF---LDAYRGRQDKEGCTPLHWAAI--RGNLE-------ACTVLVQAGKKEDL-------MVT 235 (634)
Q Consensus 175 Lh~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~TpLh~A~~--~g~~~-------iv~~Ll~~g~~~d~-------~~~ 235 (634)
||+|+..|+.+++++|++ .|++++.+|..|+||||+|+. .++.+ ++++|+++| +++ +.+
T Consensus 140 L~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g--a~~~~~~~~~~~~ 217 (256)
T 2etb_A 140 LSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG--ARLCPTVQLEEIS 217 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH--HHHSTTCCGGGCC
T ss_pred HHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC--CCccccccccccc
Confidence 555555555555555555 555555555555555555555 44444 555555555 233 445
Q ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHHH
Q 006702 236 DNTGLTPAQLASDKNHRQVAFFLGNAR 262 (634)
Q Consensus 236 d~~g~Tpl~~A~~~~~~~i~~~L~~~~ 262 (634)
|..|.||||+|+..|+.+++++|.+.+
T Consensus 218 d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 218 NHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 555555555555555555555554433
No 46
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=7.3e-34 Score=282.05 Aligned_cols=210 Identities=22% Similarity=0.263 Sum_probs=184.4
Q ss_pred cCCCCCCchHHHHHHHcCCHHHHHHHHhcCC----CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChH
Q 006702 65 SEPDGLGYYALQWAALNNRTAAAQYIIEHGG----DVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQT 140 (634)
Q Consensus 65 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~ga----d~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~ 140 (634)
+.+|..|.||||+|+..|+.+++++|++.+. ++|.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 81 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTP 81 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCH
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 3568899999999999999999999998765 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHccCCC------CCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCC-CCCcHHHHHHH
Q 006702 141 THVAAQYGQTAFLYHIVSKWNAD------PDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDK-EGCTPLHWAAI 213 (634)
Q Consensus 141 L~~Aa~~g~~~~v~~Ll~~~~~~------~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~TpLh~A~~ 213 (634)
||+|+..|+.+++++|++. +.+ ++..|..|.||||+|+..|+.+++++|++.|++++.+|. .|.||||+|+.
T Consensus 82 L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~ 160 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQS-CTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVD 160 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHS-TTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhc-ccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999987 544 577889999999999999999999999999999999998 99999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHHHh---cccCCCCCCccc
Q 006702 214 RGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARRLL---DKRCDGNSPIGK 277 (634)
Q Consensus 214 ~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~l~---~~~~~~~~~~~~ 277 (634)
.|+.+++++|+++| ++++.+|..|.|||++|+..++.+++++|.+.+.-. ..+.++.++...
T Consensus 161 ~~~~~~v~~Ll~~g--a~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~ 225 (236)
T 1ikn_D 161 LQNPDLVSLLLKCG--ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDT 225 (236)
T ss_dssp TTCHHHHHHHHTTT--CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCC
T ss_pred cCCHHHHHHHHHcC--CCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhh
Confidence 99999999999999 678899999999999999999999999987654321 233344455443
No 47
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.3e-32 Score=257.38 Aligned_cols=161 Identities=34% Similarity=0.511 Sum_probs=151.7
Q ss_pred hhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCC
Q 006702 37 LRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGA 116 (634)
Q Consensus 37 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~ 116 (634)
..+.|+.||+.|+.++|+.||+ .|+++|.+|..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 4 lg~~L~~Aa~~G~~~~v~~Ll~-~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 4 LGKRLIEAAENGNKDRVKDLIE-NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCC
Confidence 3467999999999999999999 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCC
Q 006702 117 IQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAY 196 (634)
Q Consensus 117 ~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~ 196 (634)
.++|++|+++|+|++.+|..|.||||+|+..|+.+++++|++. |++++.+|.+|.||||+|+..|+.+++++|+++|++
T Consensus 83 ~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 83 KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK-GADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGW 161 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC---
T ss_pred HHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 9999999999999999999999999999999999999999988 999999999999999999999999999999999999
Q ss_pred CCC
Q 006702 197 RGR 199 (634)
Q Consensus 197 ~~~ 199 (634)
++.
T Consensus 162 ie~ 164 (169)
T 4gpm_A 162 LEH 164 (169)
T ss_dssp ---
T ss_pred cCC
Confidence 875
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=7.2e-33 Score=278.39 Aligned_cols=198 Identities=21% Similarity=0.144 Sum_probs=163.7
Q ss_pred CCchHHHHHHHcCCHH----HHHHHHhcCCCCCC----CCCCCCcHHHHHHHh---CCHHHHHHHHhcCCCCCccccCCC
Q 006702 70 LGYYALQWAALNNRTA----AAQYIIEHGGDVNA----ADHTGQTALHWSAVR---GAIQVAELLLREGARVNAADMYGY 138 (634)
Q Consensus 70 ~g~t~Lh~Aa~~g~~~----~v~~Ll~~gad~n~----~~~~g~tpLh~A~~~---g~~~iv~~Ll~~gad~~~~d~~g~ 138 (634)
.|.||||+|+..|+.+ ++++|+++|++++. +|..|.||||+|+.. |+.+++++|+++|++++..+.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~--- 77 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKP--- 77 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSC---
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhh---
Confidence 4789999999999997 56777778999998 899999999999999 999999999999988765431
Q ss_pred hHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCC-------------CC
Q 006702 139 QTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKE-------------GC 205 (634)
Q Consensus 139 t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~-------------g~ 205 (634)
++ ......+|..|.||||+|+..|+.+++++|++.|++++.+|.. |.
T Consensus 78 -----------------~~---~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~ 137 (256)
T 2etb_A 78 -----------------LV---NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGE 137 (256)
T ss_dssp -----------------GG---GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCS
T ss_pred -----------------hc---ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCC
Confidence 11 1233445567788888888888888888888888888777765 99
Q ss_pred cHHHHHHHcCCHHHHHHHHH---cCCCCCccccCCCCCCHHHHHHh--cCcHH-------HHHHHHHHHH-H-------h
Q 006702 206 TPLHWAAIRGNLEACTVLVQ---AGKKEDLMVTDNTGLTPAQLASD--KNHRQ-------VAFFLGNARR-L-------L 265 (634)
Q Consensus 206 TpLh~A~~~g~~~iv~~Ll~---~g~~~d~~~~d~~g~Tpl~~A~~--~~~~~-------i~~~L~~~~~-l-------~ 265 (634)
||||+|+..|+.+++++|++ +| ++++.+|..|.||||+|+. .++.+ ++++|.+.+. + .
T Consensus 138 tpL~~A~~~~~~~~v~~Ll~~~~~g--a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~ 215 (256)
T 2etb_A 138 LPLSLAACTKQWDVVTYLLENPHQP--ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEE 215 (256)
T ss_dssp SHHHHHHHTTCHHHHHHHHHCSSCC--CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGG
T ss_pred CHHHHHHHcCCHHHHHHHHhccccC--CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCccccccccc
Confidence 99999999999999999999 78 6888999999999999999 78888 9999876554 4 4
Q ss_pred cccCCCCCCcccccccCcchhHHHHHH
Q 006702 266 DKRCDGNSPIGKISKLGLAPALWCVIL 292 (634)
Q Consensus 266 ~~~~~~~~~~~~~~~~g~~~l~~~~i~ 292 (634)
.++..+.+|++.+...|...++..++-
T Consensus 216 ~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 242 (256)
T 2etb_A 216 ISNHQGLTPLKLAAKEGKIEIFRHILQ 242 (256)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHh
Confidence 577889999999999999888766543
No 49
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.98 E-value=1.4e-31 Score=264.83 Aligned_cols=217 Identities=22% Similarity=0.305 Sum_probs=191.1
Q ss_pred CcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccc-cCCChHHH
Q 006702 64 VSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAAD-MYGYQTTH 142 (634)
Q Consensus 64 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d-~~g~t~L~ 142 (634)
++..|..|.|+|++|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 45678889999999999999999999999999999999999999999999999999999999999997655 45999999
Q ss_pred HHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCC-HHHHH
Q 006702 143 VAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGN-LEACT 221 (634)
Q Consensus 143 ~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~-~~iv~ 221 (634)
+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++ .++++
T Consensus 82 ~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 160 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKY-GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTR 160 (240)
T ss_dssp HHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHH
T ss_pred HHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHH
Confidence 99999999999999987 99999999999999999999999999999999999999999999999999997776 89999
Q ss_pred HHHHcCCCCCccccCC-CCCCHHHHHHhcCcHHHHHHHHHHHH-HhcccCCCCCCcccccccCc
Q 006702 222 VLVQAGKKEDLMVTDN-TGLTPAQLASDKNHRQVAFFLGNARR-LLDKRCDGNSPIGKISKLGL 283 (634)
Q Consensus 222 ~Ll~~g~~~d~~~~d~-~g~Tpl~~A~~~~~~~i~~~L~~~~~-l~~~~~~~~~~~~~~~~~g~ 283 (634)
+|++.| ++++..+. .|.||||+|+..++.+++++|.+.+. +...+..+.+|++.+.+.|.
T Consensus 161 ~L~~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 222 (240)
T 3eu9_A 161 LLLTFN--VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKN 222 (240)
T ss_dssp HHHHTT--CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred HHHhcC--CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc
Confidence 999999 57777886 89999999999999999999876532 22223333444444444333
No 50
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.98 E-value=1.8e-32 Score=278.26 Aligned_cols=203 Identities=21% Similarity=0.215 Sum_probs=175.9
Q ss_pred cCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHh----cCCCCC----CCCCCCCcHHHHHHHh---CCHHHHHHHHhcCC
Q 006702 60 EGCSVSEPDGLGYYALQWAALNNRTAAAQYIIE----HGGDVN----AADHTGQTALHWSAVR---GAIQVAELLLREGA 128 (634)
Q Consensus 60 ~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~----~gad~n----~~~~~g~tpLh~A~~~---g~~~iv~~Ll~~ga 128 (634)
.++..+..|..|.||||+|+..|+.++|+.|++ .+++++ ..|..|.||||+|+.. |+.+++++|+++|+
T Consensus 2 ~~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga 81 (273)
T 2pnn_A 2 VSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR 81 (273)
T ss_dssp ---------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred CcccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc
Confidence 345667789999999999999999999998886 566766 4578999999999987 99999999999987
Q ss_pred CC-------Cc----cccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCC--------------CCChHHHHHHhcCC
Q 006702 129 RV-------NA----ADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDN--------------DGRSPLHWAAYKGF 183 (634)
Q Consensus 129 d~-------~~----~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~--------------~g~t~Lh~A~~~g~ 183 (634)
++ +. +|..|.||||+|+..|+.+++++|++. |++++.++. .|.||||+|+..|+
T Consensus 82 ~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~ 160 (273)
T 2pnn_A 82 KTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN-GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQ 160 (273)
T ss_dssp HTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTC
T ss_pred cccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCccccccccccccccccccCCCCHHHHHHHcCC
Confidence 63 22 567999999999999999999999998 999999987 79999999999999
Q ss_pred HHHHHHHhh---cCCCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCCCc-----cccCCCCCCHHHHH
Q 006702 184 ADCIRLLLF---LDAYRGRQDKEGCTPLHWAAIRGN---------LEACTVLVQAGKKEDL-----MVTDNTGLTPAQLA 246 (634)
Q Consensus 184 ~~~v~~Ll~---~ga~~~~~d~~g~TpLh~A~~~g~---------~~iv~~Ll~~g~~~d~-----~~~d~~g~Tpl~~A 246 (634)
.+++++|++ .|++++.+|..|+||||+|+..|+ .+++++|+++|++++. +.+|..|.||||+|
T Consensus 161 ~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 161 LAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHH
Confidence 999999999 999999999999999999999998 8999999999954432 35899999999999
Q ss_pred HhcCcHHHHHHHHHHHH
Q 006702 247 SDKNHRQVAFFLGNARR 263 (634)
Q Consensus 247 ~~~~~~~i~~~L~~~~~ 263 (634)
+..|+.+++++|.+.+.
T Consensus 241 ~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 241 ASSGKIGVLAYILQREI 257 (273)
T ss_dssp HHTTCHHHHHHHHHHHT
T ss_pred HHhChHHHHHHHHHCCC
Confidence 99999999999877654
No 51
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=2.6e-32 Score=274.77 Aligned_cols=192 Identities=22% Similarity=0.242 Sum_probs=119.3
Q ss_pred chhhHHHHHHHcCCHHHHHHHHh---ccCCCCcCCC----CCCchHHHHHH---HcCCHHHHHHHHhcCCC---------
Q 006702 36 SLRNDVYTAAAYGDLEKLQRLVE---CEGCSVSEPD----GLGYYALQWAA---LNNRTAAAQYIIEHGGD--------- 96 (634)
Q Consensus 36 ~~~~~L~~Aa~~g~~~~v~~Ll~---~~~~~~~~~d----~~g~t~Lh~Aa---~~g~~~~v~~Ll~~gad--------- 96 (634)
.++++||.||+.|+.+.++.|++ ..+.+++..+ ..|.||||+|+ ..|+.+++++|++.|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 46778888888888886555555 3667776554 66888888888 56888888888887643
Q ss_pred --CCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCcccc--------------CCChHHHHHHHhCCHHHHHHHHHc-
Q 006702 97 --VNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADM--------------YGYQTTHVAAQYGQTAFLYHIVSK- 159 (634)
Q Consensus 97 --~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~--------------~g~t~L~~Aa~~g~~~~v~~Ll~~- 159 (634)
++..|..|.||||+|+..|+.++|++|+++|++++.++. .|.||||+|+..|+.+++++|++.
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 344445788888888888888888888888888887773 455555555555555555555541
Q ss_pred -cCCCCCCCCCCCChHHHHHHhcCC---------HHHHHHHhhcCCCC-------CCCCCCCCcHHHHHHHcCCHHHHHH
Q 006702 160 -WNADPDVPDNDGRSPLHWAAYKGF---------ADCIRLLLFLDAYR-------GRQDKEGCTPLHWAAIRGNLEACTV 222 (634)
Q Consensus 160 -~~~~~~~~d~~g~t~Lh~A~~~g~---------~~~v~~Ll~~ga~~-------~~~d~~g~TpLh~A~~~g~~~iv~~ 222 (634)
.|++++.+|..|+||||+|+..++ .+++++|++.|+++ +.+|..|.||||+|+..|+.+++++
T Consensus 164 ~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~ 243 (260)
T 3jxi_A 164 HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQH 243 (260)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHH
Confidence 245555555555555555554444 34555555555444 3344555555555555555555555
Q ss_pred HHHcC
Q 006702 223 LVQAG 227 (634)
Q Consensus 223 Ll~~g 227 (634)
|+++|
T Consensus 244 Ll~~g 248 (260)
T 3jxi_A 244 IIRRE 248 (260)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 55544
No 52
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.5e-32 Score=286.99 Aligned_cols=199 Identities=17% Similarity=0.164 Sum_probs=168.9
Q ss_pred HHHHHHcCCHHHHHHHHhccCCCCcC-CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCC---
Q 006702 41 VYTAAAYGDLEKLQRLVECEGCSVSE-PDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGA--- 116 (634)
Q Consensus 41 L~~Aa~~g~~~~v~~Ll~~~~~~~~~-~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~--- 116 (634)
++.|+..+..++++.|++ .|++++. .|..|.||||+||..|+.++|++|+++|++++.+|..|.||||+|+..|+
T Consensus 101 ~~~a~~~~~~~~~~~l~~-~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~ 179 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPN-TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYD 179 (327)
T ss_dssp ---CHHHHHHHHHHHCTT-SCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHH
T ss_pred hHHHHHhhHHHHHHHHHh-cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhccccc
Confidence 466777777777777776 8999999 89999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHhcC-CCCCccccCCChHHHHHHH----hCCHHHHHHHHHcc-------------------CCCCCCCCCCCC
Q 006702 117 IQVAELLLREG-ARVNAADMYGYQTTHVAAQ----YGQTAFLYHIVSKW-------------------NADPDVPDNDGR 172 (634)
Q Consensus 117 ~~iv~~Ll~~g-ad~~~~d~~g~t~L~~Aa~----~g~~~~v~~Ll~~~-------------------~~~~~~~d~~g~ 172 (634)
.++++.|++.+ ++++.+|..|.||||+|+. .|+.+++++|++.. +++++.+|..|.
T Consensus 180 ~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~ 259 (327)
T 1sw6_A 180 SGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERK 259 (327)
T ss_dssp TTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------
T ss_pred HHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCC
Confidence 78888888887 7899999999999999999 89999999998763 899999999999
Q ss_pred hHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcC
Q 006702 173 SPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKN 250 (634)
Q Consensus 173 t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~ 250 (634)
||||+|+. +++|++. +++.+|..|+||||+|+..|+.++|++|+++| +|++.+|..|+||||+|++.|
T Consensus 260 t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~G--ad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 260 DSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYG--ADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTT--CCTTCCCTTSCCGGGGTCC--
T ss_pred ChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHhcC
Confidence 99999996 8999988 58899999999999999999999999999999 678899999999999998764
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=2.3e-31 Score=267.95 Aligned_cols=197 Identities=19% Similarity=0.171 Sum_probs=176.0
Q ss_pred CCCCchHHHHHHHcCCHHHHH----HHHhcCCCCCCCC----CCCCcHHHHHH---HhCCHHHHHHHHhcCCC-------
Q 006702 68 DGLGYYALQWAALNNRTAAAQ----YIIEHGGDVNAAD----HTGQTALHWSA---VRGAIQVAELLLREGAR------- 129 (634)
Q Consensus 68 d~~g~t~Lh~Aa~~g~~~~v~----~Ll~~gad~n~~~----~~g~tpLh~A~---~~g~~~iv~~Ll~~gad------- 129 (634)
+..+.|+||.|+..|+.+.++ +|++.|++++..+ ..|.||||+|+ +.|+.+++++|++.|++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 457899999999999999554 5555999998766 67999999999 77999999999998854
Q ss_pred ----CCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCC--------------CCCChHHHHHHhcCCHHHHHHHh
Q 006702 130 ----VNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPD--------------NDGRSPLHWAAYKGFADCIRLLL 191 (634)
Q Consensus 130 ----~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d--------------~~g~t~Lh~A~~~g~~~~v~~Ll 191 (634)
++..|..|.||||+|+..|+.+++++|++. |++++.+| ..|.||||+|+..|+.+++++|+
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 160 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEK-GADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT 160 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhC-CCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 455566999999999999999999999997 99999999 68999999999999999999999
Q ss_pred h---cCCCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCCCc-----cccCCCCCCHHHHHHhcCcHHH
Q 006702 192 F---LDAYRGRQDKEGCTPLHWAAIRGN---------LEACTVLVQAGKKEDL-----MVTDNTGLTPAQLASDKNHRQV 254 (634)
Q Consensus 192 ~---~ga~~~~~d~~g~TpLh~A~~~g~---------~~iv~~Ll~~g~~~d~-----~~~d~~g~Tpl~~A~~~~~~~i 254 (634)
+ .|++++.+|..|+||||+|+..++ .+++++|+++|++++. +.+|..|.||||+|+..|+.++
T Consensus 161 ~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 240 (260)
T 3jxi_A 161 ENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240 (260)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred hccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence 9 999999999999999999999888 7999999999954433 7899999999999999999999
Q ss_pred HHHHHHHHHHh
Q 006702 255 AFFLGNARRLL 265 (634)
Q Consensus 255 ~~~L~~~~~l~ 265 (634)
+++|.+.+...
T Consensus 241 v~~Ll~~g~~~ 251 (260)
T 3jxi_A 241 FQHIIRREIAD 251 (260)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhCCCc
Confidence 99998766543
No 54
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.9e-30 Score=248.96 Aligned_cols=164 Identities=24% Similarity=0.304 Sum_probs=148.8
Q ss_pred CCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHH
Q 006702 63 SVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTH 142 (634)
Q Consensus 63 ~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~ 142 (634)
.++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLM 106 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 35678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 006702 143 VAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTV 222 (634)
Q Consensus 143 ~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~ 222 (634)
+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++
T Consensus 107 ~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~ 185 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEH-GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKI 185 (192)
T ss_dssp HHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHH
Confidence 99999999999998887 88999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcC
Q 006702 223 LVQAG 227 (634)
Q Consensus 223 Ll~~g 227 (634)
|+++|
T Consensus 186 Ll~~~ 190 (192)
T 2rfm_A 186 FTEVR 190 (192)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 98875
No 55
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.5e-31 Score=279.32 Aligned_cols=232 Identities=13% Similarity=0.053 Sum_probs=179.1
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccCCCCcC-----------------CCCCCchHHHHHHHcCCHHHHHHHHhcCC
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSE-----------------PDGLGYYALQWAALNNRTAAAQYIIEHGG 95 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~-----------------~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~ga 95 (634)
.+..+.++++ |+.++++.||+ .|++++. ......+.+|.|+..+..+++++|++.|+
T Consensus 48 ~~~~g~~~~~-----g~~~~v~~Ll~-~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~ 121 (327)
T 1sw6_A 48 ALPSPVVNDN-----EQKMKLEAFLQ-RLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQL 121 (327)
T ss_dssp CBCCCCCCCH-----HHHHHHHHHHH-HHHC-------------------------------CHHHHHHHHHHHCTTSCC
T ss_pred CCCCCCcccC-----chhHHHHHHHH-hccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCC
Confidence 3455666655 99999999998 5666544 11122234588888888999999999999
Q ss_pred CCCC-CCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCC---HHHHHHHHHccCCCCCCCCCCC
Q 006702 96 DVNA-ADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQ---TAFLYHIVSKWNADPDVPDNDG 171 (634)
Q Consensus 96 d~n~-~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~---~~~v~~Ll~~~~~~~~~~d~~g 171 (634)
++|. +|..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+ .++++.|++....+++.+|..|
T Consensus 122 dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g 201 (327)
T 1sw6_A 122 NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMN 201 (327)
T ss_dssp CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTC
T ss_pred CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCC
Confidence 9999 89999999999999999999999999999999999999999999999998 6777788877557899999999
Q ss_pred ChHHHHHHh----cCCHHHHHHHhhc--------------------CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 006702 172 RSPLHWAAY----KGFADCIRLLLFL--------------------DAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAG 227 (634)
Q Consensus 172 ~t~Lh~A~~----~g~~~~v~~Ll~~--------------------ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g 227 (634)
.||||+|+. .|+.+++++|++. |++++.+|..|.||||+|+. +++|+++
T Consensus 202 ~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~- 274 (327)
T 1sw6_A 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN- 274 (327)
T ss_dssp CCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH-
T ss_pred CCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh-
Confidence 999999999 8999999999987 89999999999999999985 9999998
Q ss_pred CCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHHH-HhcccCCCCCCcccccc
Q 006702 228 KKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNARR-LLDKRCDGNSPIGKISK 280 (634)
Q Consensus 228 ~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~-l~~~~~~~~~~~~~~~~ 280 (634)
+++.+|..|.||||+|+..|+.+++++|.+.+. +..++..+.+|++.+.+
T Consensus 275 ---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 275 ---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp ---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC
T ss_pred ---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHh
Confidence 477899999999999999999999999876542 33344555566555544
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=9.4e-31 Score=266.63 Aligned_cols=186 Identities=24% Similarity=0.298 Sum_probs=119.0
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCC--CCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCC-CCCccccCCChHHHHHH---
Q 006702 72 YYALQWAALNNRTAAAQYIIEHGGD--VNAADHTGQTALHWSAVRGAIQVAELLLREGA-RVNAADMYGYQTTHVAA--- 145 (634)
Q Consensus 72 ~t~Lh~Aa~~g~~~~v~~Ll~~gad--~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~ga-d~~~~d~~g~t~L~~Aa--- 145 (634)
.+++|.|+..++.+.++.|++.+.+ +|.+|..|.||||+|+..|+.+++++|++.|+ +++..|..|.||||+|+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT 156 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 3455666666666666666655544 56666666666666666666666666666665 66666666666666666
Q ss_pred --HhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 006702 146 --QYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVL 223 (634)
Q Consensus 146 --~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~L 223 (634)
..++.+++++|++. |.+.+..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|
T Consensus 157 ~~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~L 235 (276)
T 4hbd_A 157 LKTQDDIETVLQLFRL-GNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLL 235 (276)
T ss_dssp CCSHHHHHHHHHHHHH-SCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred hhhhhhHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Confidence 44556666666655 566666666666666666666666666666666666666666666666666666666666666
Q ss_pred HH-cCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHH
Q 006702 224 VQ-AGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGN 260 (634)
Q Consensus 224 l~-~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~ 260 (634)
++ .| ++++.+|..|.|||++|+..|+.+++++|.+
T Consensus 236 l~~~g--ad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 271 (276)
T 4hbd_A 236 LAVPS--CDISLTDRDGSTALMVALDAGQSEIASMLYS 271 (276)
T ss_dssp HTSTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HhcCC--CCCcCcCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 66 55 4555666666666666666666666666644
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=5.8e-30 Score=240.99 Aligned_cols=168 Identities=21% Similarity=0.290 Sum_probs=118.9
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCH
Q 006702 72 YYALQWAALNNRTAAAQYIIEHGGD-VNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQT 150 (634)
Q Consensus 72 ~t~Lh~Aa~~g~~~~v~~Ll~~gad-~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~ 150 (634)
.||||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYT 82 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCH
Confidence 4677777777777777777777665 666677777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 006702 151 AFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKE 230 (634)
Q Consensus 151 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~ 230 (634)
+++++|++. +++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++| +
T Consensus 83 ~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~--~ 159 (172)
T 3v30_A 83 DIVGLLLER-DVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHI--L 159 (172)
T ss_dssp HHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH--H
T ss_pred HHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHH--H
Confidence 777777765 7777777777777777777777777777777777777777777777777777777777777777777 4
Q ss_pred CccccCCCCCCH
Q 006702 231 DLMVTDNTGLTP 242 (634)
Q Consensus 231 d~~~~d~~g~Tp 242 (634)
++..++..|.||
T Consensus 160 ~~~~~~~~~~~p 171 (172)
T 3v30_A 160 KLFQSNLVPADP 171 (172)
T ss_dssp HHSCC-------
T ss_pred HHhcccCCCCCC
Confidence 555666666665
No 58
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=2.3e-29 Score=236.53 Aligned_cols=159 Identities=31% Similarity=0.416 Sum_probs=116.1
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHh
Q 006702 68 DGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQY 147 (634)
Q Consensus 68 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~ 147 (634)
...+.++|++|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 34456677777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 006702 148 GQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAG 227 (634)
Q Consensus 148 g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g 227 (634)
|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 91 ~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 91 GHLEIVEVLLKN-GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 777777777765 7777777777777777777777777777777777777777777777777777777777777777654
No 59
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=2.8e-30 Score=263.08 Aligned_cols=188 Identities=22% Similarity=0.270 Sum_probs=178.3
Q ss_pred hhHHHHHHHcCCHHHHHHHHhccCCC--CcCCCCCCchHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCCcHHHHHH--
Q 006702 38 RNDVYTAAAYGDLEKLQRLVECEGCS--VSEPDGLGYYALQWAALNNRTAAAQYIIEHGG-DVNAADHTGQTALHWSA-- 112 (634)
Q Consensus 38 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~ga-d~n~~~~~g~tpLh~A~-- 112 (634)
.++++.|+..|+.+.++.+++ .+.+ +|.+|..|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~-~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSA-RLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCH-HHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred ccCCCHHHHHHHHHHHHHHHH-HHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 455678899999999999987 4343 88999999999999999999999999999998 99999999999999999
Q ss_pred ---HhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHH
Q 006702 113 ---VRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRL 189 (634)
Q Consensus 113 ---~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~ 189 (634)
..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++
T Consensus 156 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-gad~n~~d~~G~TpLh~A~~~g~~~iv~~ 234 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLAC-EADVNVQDDDGSTALMCACEHGHKEIAGL 234 (276)
T ss_dssp CCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Confidence 77899999999999999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred Hhh-cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 006702 190 LLF-LDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAG 227 (634)
Q Consensus 190 Ll~-~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g 227 (634)
|++ .|++++.+|..|.||||+|+..|+.+++++|++++
T Consensus 235 Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 235 LLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999 89999999999999999999999999999999986
No 60
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.8e-29 Score=234.93 Aligned_cols=157 Identities=27% Similarity=0.343 Sum_probs=119.7
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCC
Q 006702 70 LGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQ 149 (634)
Q Consensus 70 ~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~ 149 (634)
...||||+|+..|+.+++++|+++|++++.++..|.||||+|+. |+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 34577777777777777777777777777777777777777777 77777777777777777777777777777777777
Q ss_pred HHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 006702 150 TAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAY-RGRQDKEGCTPLHWAAIRGNLEACTVLVQAGK 228 (634)
Q Consensus 150 ~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~ 228 (634)
.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 83 ~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 83 LDTLQTLLEF-QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred HHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 7777777766 777777777778888888888888888888887776 47777788888888888888888888888774
No 61
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=3.5e-29 Score=234.46 Aligned_cols=157 Identities=22% Similarity=0.270 Sum_probs=135.0
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCC
Q 006702 70 LGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQ 149 (634)
Q Consensus 70 ~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~ 149 (634)
.|.||||.|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 46788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 006702 150 TAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAG 227 (634)
Q Consensus 150 ~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g 227 (634)
.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++++
T Consensus 82 ~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 82 TDIVKMLLDC-GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp HHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHC-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHH
Confidence 8888888877 8888888888888888888888888888888888888888888888888888888888888888876
No 62
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.6e-29 Score=238.02 Aligned_cols=169 Identities=19% Similarity=0.286 Sum_probs=155.9
Q ss_pred hhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCH
Q 006702 38 RNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAI 117 (634)
Q Consensus 38 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~ 117 (634)
.++||.||..|+.+.++.|++.....++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYT 82 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCH
Confidence 57899999999999999999955555899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCC
Q 006702 118 QVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYR 197 (634)
Q Consensus 118 ~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~ 197 (634)
+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 83 DIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR-GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL 161 (172)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999987 9999999999999999999999999999999999999
Q ss_pred CCCCCCCCcH
Q 006702 198 GRQDKEGCTP 207 (634)
Q Consensus 198 ~~~d~~g~Tp 207 (634)
..++..|.||
T Consensus 162 ~~~~~~~~~p 171 (172)
T 3v30_A 162 FQSNLVPADP 171 (172)
T ss_dssp SCC-------
T ss_pred hcccCCCCCC
Confidence 9888888887
No 63
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=5.9e-29 Score=238.61 Aligned_cols=163 Identities=24% Similarity=0.305 Sum_probs=157.3
Q ss_pred CCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHH
Q 006702 97 VNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLH 176 (634)
Q Consensus 97 ~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh 176 (634)
+|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSK-GSNVNTKDFSGKTPLM 106 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTSCCHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHH
Confidence 567889999999999999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred HHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHH
Q 006702 177 WAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAF 256 (634)
Q Consensus 177 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~ 256 (634)
+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|+..++.++++
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--a~~~~~~~~g~t~l~~A~~~~~~~~v~ 184 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELG--ADISARDLTGLTAEASARIFGRQEVIK 184 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT--CCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHhCcHHHHH
Confidence 999999999999999999999999999999999999999999999999999 678899999999999999999999999
Q ss_pred HHHHHH
Q 006702 257 FLGNAR 262 (634)
Q Consensus 257 ~L~~~~ 262 (634)
+|.+.+
T Consensus 185 ~Ll~~~ 190 (192)
T 2rfm_A 185 IFTEVR 190 (192)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 997654
No 64
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=7.7e-29 Score=230.61 Aligned_cols=159 Identities=28% Similarity=0.353 Sum_probs=150.8
Q ss_pred cchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q 006702 35 ESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVR 114 (634)
Q Consensus 35 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~ 114 (634)
+...++|+.|+..|+.+.++.|++ .+.+++.+|..|.||||+|+. |+.+++++|+++|++++.++..|.||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQ-NNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARA 80 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTT-SCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHh-CCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 467899999999999999999998 889999999999999999999 999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCC-CCCCCCCCChHHHHHHhcCCHHHHHHHhhc
Q 006702 115 GAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNAD-PDVPDNDGRSPLHWAAYKGFADCIRLLLFL 193 (634)
Q Consensus 115 g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~-~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 193 (634)
|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. +++ ++.+|..|.||||+|+..|+.+++++|+++
T Consensus 81 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH-TASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159 (162)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-SCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999998 666 699999999999999999999999999999
Q ss_pred CCC
Q 006702 194 DAY 196 (634)
Q Consensus 194 ga~ 196 (634)
|+|
T Consensus 160 GAd 162 (162)
T 1ihb_A 160 GAG 162 (162)
T ss_dssp C--
T ss_pred CCC
Confidence 985
No 65
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.9e-28 Score=230.26 Aligned_cols=160 Identities=30% Similarity=0.487 Sum_probs=152.8
Q ss_pred cccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 006702 33 DEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSA 112 (634)
Q Consensus 33 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~ 112 (634)
......++|+.||+.|+.+++++|++ .|.+++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMA-NGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 45678899999999999999999999 79999999999999999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhh
Q 006702 113 VRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLF 192 (634)
Q Consensus 113 ~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 192 (634)
..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN-GADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988 99999999999999999999999999999998
Q ss_pred cC
Q 006702 193 LD 194 (634)
Q Consensus 193 ~g 194 (634)
.|
T Consensus 168 ~G 169 (169)
T 2y1l_E 168 LN 169 (169)
T ss_dssp C-
T ss_pred cC
Confidence 76
No 66
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.1e-31 Score=265.87 Aligned_cols=200 Identities=19% Similarity=0.195 Sum_probs=173.6
Q ss_pred HHHHHhccCCCCcC---CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCC
Q 006702 53 LQRLVECEGCSVSE---PDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGAR 129 (634)
Q Consensus 53 v~~Ll~~~~~~~~~---~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad 129 (634)
++.||+ .+.+++. .+..+.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 1 v~~ll~-~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLR-KAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ----------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred Ceehhc-cCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 456777 5666554 456677899999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCC-CCCChHHHHH--HhcCCHHHHHHHhhcCCCCCCCCCCCCc
Q 006702 130 VNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPD-NDGRSPLHWA--AYKGFADCIRLLLFLDAYRGRQDKEGCT 206 (634)
Q Consensus 130 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh~A--~~~g~~~~v~~Ll~~ga~~~~~d~~g~T 206 (634)
++.+|..|.||||+|+..|+.+++++|++. |++++.++ ..|.||||+| +..|+.+++++|++.|++++.+|..|.|
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~ 158 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQH-GAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVY 158 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEE
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchH
Confidence 999999999999999999999999999987 99999987 6999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHH
Q 006702 207 PLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFF 257 (634)
Q Consensus 207 pLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~ 257 (634)
|++.++..+ .+++|++.|++++++.+|..|.||||+|+..|+.++++.
T Consensus 159 ~l~~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 159 ALWDYSAEF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp ESSCBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred HHHHHhhcc---ccccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 999665544 336788889777788999999999999999999988754
No 67
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=3.6e-28 Score=224.35 Aligned_cols=150 Identities=24% Similarity=0.303 Sum_probs=97.2
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHH
Q 006702 72 YYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTA 151 (634)
Q Consensus 72 ~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~ 151 (634)
.|+||.|+..|+.+++++|+++|++++ .+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 456666666666666666666666655 3556666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 006702 152 FLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVL 223 (634)
Q Consensus 152 ~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~L 223 (634)
++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|
T Consensus 82 ~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 82 IVEVLLKH-GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 66666654 666666666666666666666666666666666666666666666666666666666666655
No 68
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.6e-28 Score=232.84 Aligned_cols=161 Identities=21% Similarity=0.290 Sum_probs=80.3
Q ss_pred hhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCH
Q 006702 38 RNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAI 117 (634)
Q Consensus 38 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~ 117 (634)
.++|+.|++.|+.+.++.|++..+.+++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 85 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHR 85 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 34455555555555555555544444555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCC
Q 006702 118 QVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYR 197 (634)
Q Consensus 118 ~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~ 197 (634)
+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.|||++|+..++.+++++|++.|+++
T Consensus 86 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 86 DIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN-GALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL 164 (179)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCc
Confidence 555555555555544444444444444444444444444443 4444444444444444444444444444444444444
Q ss_pred CC
Q 006702 198 GR 199 (634)
Q Consensus 198 ~~ 199 (634)
+.
T Consensus 165 ~~ 166 (179)
T 3f6q_A 165 NR 166 (179)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 69
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=7.7e-28 Score=225.27 Aligned_cols=159 Identities=23% Similarity=0.321 Sum_probs=152.8
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcC
Q 006702 103 TGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKG 182 (634)
Q Consensus 103 ~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g 182 (634)
.|.||||.|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQN-GADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcC
Confidence 588999999999999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHH
Q 006702 183 FADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNAR 262 (634)
Q Consensus 183 ~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~ 262 (634)
+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|+..++.+++++|.+..
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG--ADPTIETDSGYNSMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 677889999999999999999999999997765
Q ss_pred HH
Q 006702 263 RL 264 (634)
Q Consensus 263 ~l 264 (634)
.-
T Consensus 159 ~~ 160 (167)
T 3v31_A 159 LK 160 (167)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 70
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=2e-28 Score=232.28 Aligned_cols=168 Identities=21% Similarity=0.266 Sum_probs=155.3
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHh
Q 006702 69 GLGYYALQWAALNNRTAAAQYIIEH-GGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQY 147 (634)
Q Consensus 69 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~-gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~ 147 (634)
.++.++||.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 4578999999999999999999998 678999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 006702 148 GQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAG 227 (634)
Q Consensus 148 g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g 227 (634)
|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.|||++|+..++.+++++|+++|
T Consensus 83 ~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g 161 (179)
T 3f6q_A 83 GHRDIVQKLLQY-KADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMG 161 (179)
T ss_dssp TCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 999999999988 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCC
Q 006702 228 KKEDLMVTDNTG 239 (634)
Q Consensus 228 ~~~d~~~~d~~g 239 (634)
+ +++..+..+
T Consensus 162 ~--~~~~~~~~~ 171 (179)
T 3f6q_A 162 Q--NLNRIPYKD 171 (179)
T ss_dssp C--CCSCBCCCC
T ss_pred c--CcccCCccc
Confidence 4 555555443
No 71
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=3.6e-28 Score=227.09 Aligned_cols=160 Identities=31% Similarity=0.467 Sum_probs=102.5
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAV 113 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~ 113 (634)
++.+.++|+.|++.|+.+.++.|++..+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 45566777777777777777777765566666666666777777777777777777777777777777777777777777
Q ss_pred hCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhc
Q 006702 114 RGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFL 193 (634)
Q Consensus 114 ~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 193 (634)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+. |+.+++++|++.
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~ 162 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH-GADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGD 162 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCChhHhHhc-CChHHHHHHhhc
Confidence 7777777777776666666666666666666665555555555554 55555555555555555444 555555555554
Q ss_pred CC
Q 006702 194 DA 195 (634)
Q Consensus 194 ga 195 (634)
|+
T Consensus 163 gA 164 (165)
T 3twr_A 163 AA 164 (165)
T ss_dssp --
T ss_pred cc
Confidence 43
No 72
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=2.5e-28 Score=228.10 Aligned_cols=160 Identities=26% Similarity=0.280 Sum_probs=144.7
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHH
Q 006702 67 PDGLGYYALQWAALNNRTAAAQYIIE-HGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAA 145 (634)
Q Consensus 67 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~-~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa 145 (634)
.|..|.|+||.|+..|+.++++.|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 35678899999999999999999998 45678888888999999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 006702 146 QYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQ 225 (634)
Q Consensus 146 ~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~ 225 (634)
..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+. |+.+++++|++
T Consensus 84 ~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 84 SYGHYEVAELLVKH-GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp HTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred HcCcHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhh
Confidence 99999999999987 99999999999999999999999999999999999999999999999999776 88999999998
Q ss_pred cCC
Q 006702 226 AGK 228 (634)
Q Consensus 226 ~g~ 228 (634)
+|+
T Consensus 162 ~gA 164 (165)
T 3twr_A 162 DAA 164 (165)
T ss_dssp C--
T ss_pred ccc
Confidence 873
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.8e-27 Score=220.04 Aligned_cols=151 Identities=29% Similarity=0.399 Sum_probs=83.0
Q ss_pred hhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCH
Q 006702 38 RNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAI 117 (634)
Q Consensus 38 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~ 117 (634)
.++|+.|+..|+.+.++.|++..+.+++..|..|.||||+ +..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 81 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFL 81 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence 4555566666666666665554334555555555566655 555556666665555555555555555555555555555
Q ss_pred HHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHh
Q 006702 118 QVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLL 191 (634)
Q Consensus 118 ~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 191 (634)
+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. ++++.+|..|.||||+|+..|+.+++++|+
T Consensus 82 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 82 DTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRGAQDLVDILQ 153 (156)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 555555555555555555555555555555555555554443 444444444444444444444444444444
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=2.5e-27 Score=218.66 Aligned_cols=151 Identities=24% Similarity=0.337 Sum_probs=145.5
Q ss_pred hhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCC
Q 006702 37 LRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGA 116 (634)
Q Consensus 37 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~ 116 (634)
..++|+.|++.|+.+.++.|++ .+.+++ .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~-~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMA-NGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH-HTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHH-cCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 5789999999999999999999 677776 58889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 006702 117 IQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLL 190 (634)
Q Consensus 117 ~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 190 (634)
.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY-GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999999999999999999999999998 999999999999999999999999999987
No 75
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.3e-27 Score=221.05 Aligned_cols=153 Identities=29% Similarity=0.343 Sum_probs=141.1
Q ss_pred CchHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCC
Q 006702 71 GYYALQWAALNNRTAAAQYIIEH-GGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQ 149 (634)
Q Consensus 71 g~t~Lh~Aa~~g~~~~v~~Ll~~-gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~ 149 (634)
+.|+||+|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 56899999999999999999988 44899999999999999 88999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 006702 150 TAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQA 226 (634)
Q Consensus 150 ~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 226 (634)
.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++. ++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 81 ~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 81 LDTLKVLVEH-GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999987 899999999999999999999999999999988 99999999999999999999999999999875
No 76
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.3e-30 Score=258.12 Aligned_cols=188 Identities=21% Similarity=0.152 Sum_probs=174.4
Q ss_pred ccccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 006702 32 VDEESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWS 111 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A 111 (634)
..+..+.++|+.|+..|+.++++.|++ .|++++.+|..|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A 94 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVK-EMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCA 94 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHH-HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 356678899999999999999999998 7899999999999999999999999999999999999999999999999999
Q ss_pred HHhCCHHHHHHHHhcCCCCCccc-cCCChHHHHH--HHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHH
Q 006702 112 AVRGAIQVAELLLREGARVNAAD-MYGYQTTHVA--AQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIR 188 (634)
Q Consensus 112 ~~~g~~~iv~~Ll~~gad~~~~d-~~g~t~L~~A--a~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~ 188 (634)
+..|+.+++++|+++|++++.++ ..|.||||+| +..|+.+++++|++. |++++.+|..|.||++.++..+. .+
T Consensus 95 ~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~~l~~~~~~~~---~~ 170 (229)
T 2vge_A 95 ASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADV-EQSMGLMNSGAVYALWDYSAEFG---DE 170 (229)
T ss_dssp HHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH-HHHTTTSGGGEEEESSCBCCSST---TB
T ss_pred HHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHc-CCCcccccCCchHHHHHHhhccc---cc
Confidence 99999999999999999999986 6999999999 999999999999998 99999999999999997665543 36
Q ss_pred HHhhcCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 006702 189 LLLFLDAY--RGRQDKEGCTPLHWAAIRGNLEACTVLV 224 (634)
Q Consensus 189 ~Ll~~ga~--~~~~d~~g~TpLh~A~~~g~~~iv~~Ll 224 (634)
+|++.|++ ++.+|..|+||||+|+..|+.++|+.++
T Consensus 171 ~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 171 LSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp CCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred cCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 88899988 6789999999999999999999998644
No 77
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1.3e-28 Score=245.17 Aligned_cols=182 Identities=19% Similarity=0.151 Sum_probs=129.2
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHh
Q 006702 68 DGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQY 147 (634)
Q Consensus 68 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~ 147 (634)
+..|.||||.|+..++.++++.|+++|++++.. ..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 346889999999999999999999999998864 6788999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCC-cHHHHH--HHcCCHHHHHHHH
Q 006702 148 GQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGC-TPLHWA--AIRGNLEACTVLV 224 (634)
Q Consensus 148 g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~-TpLh~A--~~~g~~~iv~~Ll 224 (634)
|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|. ||||+| +..|+.+++++|+
T Consensus 81 g~~~~v~~Ll~~-ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll 159 (239)
T 1ycs_B 81 GHTEIVKFLVQF-GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY 159 (239)
T ss_dssp TCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHH
T ss_pred CCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHH
Confidence 999999999987 999999999999999999999999999999999999999988776 999998 7888999999999
Q ss_pred HcCCCCCcc-------ccCCCCCCHHHHHHhcCc
Q 006702 225 QAGKKEDLM-------VTDNTGLTPAQLASDKNH 251 (634)
Q Consensus 225 ~~g~~~d~~-------~~d~~g~Tpl~~A~~~~~ 251 (634)
++|++.+.. ..|..+.+++++|...|.
T Consensus 160 ~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 160 GVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 988544321 226678888888888775
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=6.7e-28 Score=240.00 Aligned_cols=208 Identities=20% Similarity=0.196 Sum_probs=148.9
Q ss_pred cchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q 006702 35 ESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVR 114 (634)
Q Consensus 35 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~ 114 (634)
..+.|+|+.|++.|+.+.++.|++ .|++++.. ..|.||||+|+..|+.+++++|++.|+++|.+|..|.||||+|+..
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~-~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIA-HGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhc-cCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 468999999999999999999998 88888854 7799999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCC-hHHHHH--HhcCCHHHHHHHh
Q 006702 115 GAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGR-SPLHWA--AYKGFADCIRLLL 191 (634)
Q Consensus 115 g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~-t~Lh~A--~~~g~~~~v~~Ll 191 (634)
|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|. ||||+| +..|+.+++++|+
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll 159 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVES-GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY 159 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcceecCCCCcchHHHHHHhhhccHHHHHHHH
Confidence 999999999999999999999999999999999999999999988 999999998887 999999 7889999999999
Q ss_pred hcCCCCCCC---------CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC----CccccCCCCCCHHHHHH
Q 006702 192 FLDAYRGRQ---------DKEGCTPLHWAAIRGNLEACTVLVQAGKKE----DLMVTDNTGLTPAQLAS 247 (634)
Q Consensus 192 ~~ga~~~~~---------d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~----d~~~~d~~g~Tpl~~A~ 247 (634)
+.|++++.. |..+.+++++|...|. +++.|.+.+.+. .....+..|.+|..+..
T Consensus 160 ~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~ 226 (239)
T 1ycs_B 160 GVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHREDEDEIEWWWARLNDKEGYVPRNLLG 226 (239)
T ss_dssp HHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCCCTTSCSSEEEEEETTEEEEEEGGGEE
T ss_pred HhhhcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEecCCCCCCEEEEEECCcEEEeehHHee
Confidence 999988765 5678889988887775 344444333110 01234445556655543
No 79
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=1.3e-28 Score=261.07 Aligned_cols=238 Identities=13% Similarity=-0.021 Sum_probs=169.6
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCC---CcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCC---CCCCCCCCcH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCS---VSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDV---NAADHTGQTA 107 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~---~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~---n~~~~~g~tp 107 (634)
+....|+||.||+.|+.+++++|++ .+.. .+..+..|.||||+||.+|+.++|++|+++|+++ +..+.+ .||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~-~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCL-LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHA 166 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTT-C--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHH-cCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCH
Confidence 3446799999999999999999998 5542 2244556889999999999999999999999862 333233 899
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCCCc--cccCCChHHHHHH-HhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCH
Q 006702 108 LHWSAVRGAIQVAELLLREGARVNA--ADMYGYQTTHVAA-QYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFA 184 (634)
Q Consensus 108 Lh~A~~~g~~~iv~~Ll~~gad~~~--~d~~g~t~L~~Aa-~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 184 (634)
||+|+..|+.++|++|+++|++++. .|..|.||||+|+ ..|+.+++++|++. |. .|.||||+|+..|+.
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~-ga-------~~~taL~~Aa~~g~~ 238 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC-PV-------MLAYAEIHEFEYGEK 238 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS-HH-------HHHHHHHCTTTTTTT
T ss_pred HHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhC-CC-------ccchHHHHHHHCCCH
Confidence 9999999999999999999999887 8889999999999 99999999999985 43 388999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCC---------------------------HHHHHHHHHcCCC---CCccc
Q 006702 185 DCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGN---------------------------LEACTVLVQAGKK---EDLMV 234 (634)
Q Consensus 185 ~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~---------------------------~~iv~~Ll~~g~~---~d~~~ 234 (634)
+++++|++.|++++..|. ++++|+..|+ .+.+++|++.+.- .+...
T Consensus 239 evv~lL~~~ga~~~~~~~----~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~ 314 (376)
T 2aja_A 239 YVNPFIARHVNRLKEMHD----AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTAT 314 (376)
T ss_dssp THHHHHHHHHHHHHHHHT----TTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCS
T ss_pred HHHHHHHhcCcccccccH----HHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCC
Confidence 999999999987765432 3344444443 3445555543210 01112
Q ss_pred cCCCCCCHHHHHHhcCcHHHHHHHHHHHHHhcccCCCCCCcccccccCcchhH
Q 006702 235 TDNTGLTPAQLASDKNHRQVAFFLGNARRLLDKRCDGNSPIGKISKLGLAPAL 287 (634)
Q Consensus 235 ~d~~g~Tpl~~A~~~~~~~i~~~L~~~~~l~~~~~~~~~~~~~~~~~g~~~l~ 287 (634)
..+.+.||+++|+..|+.+++++|.+.+.+ ++..+++++..+...|...+.
T Consensus 315 ~~n~~~~~L~~A~~~g~~e~v~lLl~~~~v--~~~~~~~~~~~~~~~~~~~~~ 365 (376)
T 2aja_A 315 IPGDANELLRLALRLGNQGACALLLSIPSV--LALTKANNYYINETGGRLDLR 365 (376)
T ss_dssp STTCCCHHHHHHHHHTCTTHHHHHTTSHHH--HHSCC----------------
T ss_pred CCCCccHHHHHHHHcCcHHHHHHHHcChHH--HHHHHHhccccccccccccHH
Confidence 334577899999999999999999775543 344566666666666655443
No 80
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=8.7e-26 Score=204.10 Aligned_cols=131 Identities=29% Similarity=0.319 Sum_probs=71.0
Q ss_pred CCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHH
Q 006702 62 CSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTT 141 (634)
Q Consensus 62 ~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L 141 (634)
.+++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+. |+.+++++|+++|++++.
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~--------- 72 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC--------- 72 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC---------
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC---------
Confidence 3445555555555555555555555555555555555555555555555555 555555555555555544
Q ss_pred HHHHHhCCHHHHHHHHHccCCCCCCCCCC-CChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 006702 142 HVAAQYGQTAFLYHIVSKWNADPDVPDND-GRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEAC 220 (634)
Q Consensus 142 ~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~-g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv 220 (634)
+|.. |.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++
T Consensus 73 -------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~ 127 (136)
T 1d9s_A 73 -------------------------ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIA 127 (136)
T ss_dssp -------------------------CBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHH
T ss_pred -------------------------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH
Confidence 4444 55555555555555555555555555555555555555555555555555
Q ss_pred HHHHHcC
Q 006702 221 TVLVQAG 227 (634)
Q Consensus 221 ~~Ll~~g 227 (634)
++|+++|
T Consensus 128 ~~Ll~~G 134 (136)
T 1d9s_A 128 RYLHAAT 134 (136)
T ss_dssp HHHHHHH
T ss_pred HHHHHcC
Confidence 5555555
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=6.5e-26 Score=210.03 Aligned_cols=142 Identities=27% Similarity=0.242 Sum_probs=91.8
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCCh-HHHHH
Q 006702 66 EPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQ-TTHVA 144 (634)
Q Consensus 66 ~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t-~L~~A 144 (634)
..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+ .|+.+++++|+++|++++.+|..|.| |||+|
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 44566777777777777777777777777777777777777777775 77777777777777777777777776 77777
Q ss_pred HHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHH
Q 006702 145 AQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLH 209 (634)
Q Consensus 145 a~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh 209 (634)
+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||.+
T Consensus 86 ~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 86 AREGFLDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHTCHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HHCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 777777777777665 6777777777777777777777777777777777777777666666655
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=9.1e-26 Score=203.96 Aligned_cols=132 Identities=30% Similarity=0.360 Sum_probs=117.1
Q ss_pred CCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCC-CC
Q 006702 127 GARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKE-GC 205 (634)
Q Consensus 127 gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~ 205 (634)
+++++.+|..|.||||.|+..|+.+++++|++. |++++.+|..|.||||+|+. |+.+++++|++.|++++.+|.. |.
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEA-GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 456677777777777777777777777777766 77778888889999999999 9999999999999999999999 99
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHHHHHHHHHH
Q 006702 206 TPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQVAFFLGNAR 262 (634)
Q Consensus 206 TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i~~~L~~~~ 262 (634)
||||+|+..|+.+++++|+++| ++++.+|..|.|||++|+..++.+++++|.+.+
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~g--a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAG--ARLDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTC--CCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999999999999 678899999999999999999999999997754
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=1.5e-26 Score=221.18 Aligned_cols=155 Identities=19% Similarity=0.172 Sum_probs=109.4
Q ss_pred chhhHHHHHHHcCCHHHHHHHHhccCCCCcCCC-CCCchHHHHHHHcCCH----HHHHHHHhcCCCCCCCCCCCCcHHHH
Q 006702 36 SLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPD-GLGYYALQWAALNNRT----AAAQYIIEHGGDVNAADHTGQTALHW 110 (634)
Q Consensus 36 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh~Aa~~g~~----~~v~~Ll~~gad~n~~~~~g~tpLh~ 110 (634)
+..++|+.||+.|+.+.++.+++ .+ ++..+ ..|.||||+|+.+|+. +++++|+++|+|+|.+|..|+||||+
T Consensus 5 ~~~~~l~~Aa~~g~~~~~~~l~~-~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~ 81 (186)
T 3t8k_A 5 SEYRTVSAAAMLGTYEDFLELFE-KG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFP 81 (186)
T ss_dssp HHCSSHHHHHHHSCHHHHHHHHH-HS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHH
T ss_pred ccccHHHHHHHcCCHHHHHHHHh-cC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 45678899999999999988887 33 34444 6688999999998875 48999999999999999999999999
Q ss_pred HHHhCC------HHHHHHHHhcCCCCCccccCCC-hHHHHHHHhCC-----HHHHHHHHHccCCCCCCCCCCCChHHHHH
Q 006702 111 SAVRGA------IQVAELLLREGARVNAADMYGY-QTTHVAAQYGQ-----TAFLYHIVSKWNADPDVPDNDGRSPLHWA 178 (634)
Q Consensus 111 A~~~g~------~~iv~~Ll~~gad~~~~d~~g~-t~L~~Aa~~g~-----~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 178 (634)
|+..|+ .+++++|+++|+|++.+|..|. ||||+|+..+. .+++++|++..|++++.+|..|.||||+|
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence 998886 5678888888888888877777 77777776332 23444444422455555555555555555
Q ss_pred HhcCCHHHHHHHhhc
Q 006702 179 AYKGFADCIRLLLFL 193 (634)
Q Consensus 179 ~~~g~~~~v~~Ll~~ 193 (634)
+..|+.+++++|.+.
T Consensus 162 ~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 162 KRCQKPIALKMMEDY 176 (186)
T ss_dssp HTTTCHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHH
Confidence 555555555544443
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=1.4e-25 Score=207.73 Aligned_cols=146 Identities=23% Similarity=0.290 Sum_probs=121.4
Q ss_pred CCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCCh-HH
Q 006702 97 VNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRS-PL 175 (634)
Q Consensus 97 ~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t-~L 175 (634)
.+..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+ .|+.+++++|++. |++++.+|..|.| ||
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~-g~~~~~~d~~g~ttpL 82 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLH-GAEPNCADPATLTRPV 82 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTT-TCCCCCCCTTTCCCHH
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHc-CCCCCCcCCCCCcHHH
Confidence 3455678999999999999999999999999999999999999999985 9999999999987 9999999999999 99
Q ss_pred HHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHH
Q 006702 176 HWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLA 246 (634)
Q Consensus 176 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A 246 (634)
|+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||.+-+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g--a~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAA--GGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------------------
T ss_pred HHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcC--CCCCccCcCcCcccccC
Confidence 9999999999999999999999999999999999999999999999999999 67889999999998744
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=4.3e-26 Score=218.02 Aligned_cols=154 Identities=15% Similarity=0.022 Sum_probs=119.1
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHhCCH----HHHHHHHhcCCCCCccccCCChHHHHHH
Q 006702 71 GYYALQWAALNNRTAAAQYIIEHGGDVNAAD-HTGQTALHWSAVRGAI----QVAELLLREGARVNAADMYGYQTTHVAA 145 (634)
Q Consensus 71 g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~-~~g~tpLh~A~~~g~~----~iv~~Ll~~gad~~~~d~~g~t~L~~Aa 145 (634)
++++|+.|+..|+.+.++.+++.+. +.++ ..|+||||+|+..|+. +++++|+++|+|++.+|..|.||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 4577888999999988888887653 4455 5688999999888875 4888888989988888888888888888
Q ss_pred HhCC------HHHHHHHHHccCCCCCCCCCCCC-hHHHHHHhcCC-----HHHHHHHhh-cCCCCCCCCCCCCcHHHHHH
Q 006702 146 QYGQ------TAFLYHIVSKWNADPDVPDNDGR-SPLHWAAYKGF-----ADCIRLLLF-LDAYRGRQDKEGCTPLHWAA 212 (634)
Q Consensus 146 ~~g~------~~~v~~Ll~~~~~~~~~~d~~g~-t~Lh~A~~~g~-----~~~v~~Ll~-~ga~~~~~d~~g~TpLh~A~ 212 (634)
..++ .+++++|++. |++++.+|..|. ||||+|+..+. .+++++|++ .|++++.+|..|.||||+|+
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~-Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~ 162 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEK-GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVK 162 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHT-TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHH
T ss_pred HcCCcchhhHHHHHHHHHHC-CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHH
Confidence 8876 4667777776 777777777777 77777777443 357777777 77777777777777777777
Q ss_pred HcCCHHHHHHHHHcC
Q 006702 213 IRGNLEACTVLVQAG 227 (634)
Q Consensus 213 ~~g~~~iv~~Ll~~g 227 (634)
..|+.++|++|++..
T Consensus 163 ~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 163 RCQKPIALKMMEDYI 177 (186)
T ss_dssp TTTCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHH
Confidence 777777777777664
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=7.8e-24 Score=191.19 Aligned_cols=122 Identities=28% Similarity=0.369 Sum_probs=58.1
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCC
Q 006702 70 LGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQ 149 (634)
Q Consensus 70 ~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~ 149 (634)
.+.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 92 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGH 92 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 34455555555555555555555555555555555555555555555555555555555544444444444444444444
Q ss_pred HHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhh
Q 006702 150 TAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLF 192 (634)
Q Consensus 150 ~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 192 (634)
.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++
T Consensus 93 ~~~v~~Ll~~-g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 93 LEIAEVLLKH-GADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 4444444433 44444444444444444444444444444433
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.6e-23 Score=185.38 Aligned_cols=124 Identities=39% Similarity=0.583 Sum_probs=64.9
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCH
Q 006702 71 GYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQT 150 (634)
Q Consensus 71 g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~ 150 (634)
|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 45555555555555555555555555555555555555555555555555555555555555544444444444444444
Q ss_pred HHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCC
Q 006702 151 AFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDA 195 (634)
Q Consensus 151 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga 195 (634)
+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 82 ~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 82 EVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 444444443 44444444444444444444444444444444443
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1.3e-23 Score=189.85 Aligned_cols=126 Identities=28% Similarity=0.318 Sum_probs=118.3
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHh
Q 006702 101 DHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAY 180 (634)
Q Consensus 101 ~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 180 (634)
...+.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKN-GADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999987 99999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 006702 181 KGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAG 227 (634)
Q Consensus 181 ~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g 227 (634)
.|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999876
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=2.8e-23 Score=183.68 Aligned_cols=125 Identities=41% Similarity=0.619 Sum_probs=120.8
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcC
Q 006702 103 TGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKG 182 (634)
Q Consensus 103 ~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g 182 (634)
+|.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+..++.+++++|++. +++++.+|..|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcC
Confidence 489999999999999999999999999999999999999999999999999999987 9999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 006702 183 FADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGK 228 (634)
Q Consensus 183 ~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~ 228 (634)
+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999984
No 90
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.90 E-value=1.7e-26 Score=244.79 Aligned_cols=193 Identities=13% Similarity=0.069 Sum_probs=112.1
Q ss_pred hHHHHHHH-cCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCC---CCCCCCCCcHHHHHHHh
Q 006702 39 NDVYTAAA-YGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDV---NAADHTGQTALHWSAVR 114 (634)
Q Consensus 39 ~~L~~Aa~-~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~---n~~~~~g~tpLh~A~~~ 114 (634)
+.++.|+. .++.+.++++++ .+. .+.||||+||..|+.++|++|+++|+.. +..+..|.||||+|+..
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~-~g~-------~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~ 138 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHK-KGI-------KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAEN 138 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHH-HTC-------CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCHHHHHHHHH-cCC-------CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHc
Confidence 34455544 355666666665 332 2346777777777777777777666522 12233456677777777
Q ss_pred CCHHHHHHHHhcCCCC---CccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCC--CCCCCChHHHHHH-hcCCHHHHH
Q 006702 115 GAIQVAELLLREGARV---NAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDV--PDNDGRSPLHWAA-YKGFADCIR 188 (634)
Q Consensus 115 g~~~iv~~Ll~~gad~---~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~--~d~~g~t~Lh~A~-~~g~~~~v~ 188 (634)
|+.++|++|+++|+|+ +..+.. .||||+|+..|+.+++++|++. |++++. .|..|.||||+|+ ..|+.++++
T Consensus 139 G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~-ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~ 216 (376)
T 2aja_A 139 GHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCEL-APTEATAMIQAENYYAFRWAAVGRGHHNVIN 216 (376)
T ss_dssp TCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHS-CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred CCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHc-CCccchhccCCCCCCHHHHHHHHCCCHHHHH
Confidence 7777777777776542 222222 6666666666666666666665 666555 5666666666666 666666666
Q ss_pred HHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcHHH
Q 006702 189 LLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQV 254 (634)
Q Consensus 189 ~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~~i 254 (634)
+|++.|++ |.||||+|+..|+.+++++|+++| .+++.+| ++++.|+..|+.++
T Consensus 217 ~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~~g--a~~~~~~----~~l~~A~~~g~~~v 269 (376)
T 2aja_A 217 FLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARHV--NRLKEMH----DAFKLSNPDGVFDL 269 (376)
T ss_dssp HHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHHHH--HHHHHHH----TTTTTTSSSSCCCC
T ss_pred HHHhCCCc-------cchHHHHHHHCCCHHHHHHHHhcC--ccccccc----HHHHHHHHCCChhh
Confidence 66665532 556666666666666666666666 2333333 24555555555543
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=1e-23 Score=190.48 Aligned_cols=131 Identities=24% Similarity=0.315 Sum_probs=89.7
Q ss_pred CCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHH
Q 006702 62 CSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTT 141 (634)
Q Consensus 62 ~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L 141 (634)
+|+ .+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 2 ~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 80 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPL 80 (137)
T ss_dssp --C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHH
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHH
Confidence 444 5566777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcC
Q 006702 142 HVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLD 194 (634)
Q Consensus 142 ~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g 194 (634)
|+|+..|+.+++++|++. |++++.+|..|.||||+|+..+..+++++|.+.+
T Consensus 81 ~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 81 HDAAKNGHVDIVKLLLSY-GASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 777777777777766665 6666667777777777776666666666555433
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=2.6e-23 Score=197.89 Aligned_cols=137 Identities=26% Similarity=0.255 Sum_probs=71.4
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccc-cCCChHHHHHHHhC
Q 006702 70 LGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAAD-MYGYQTTHVAAQYG 148 (634)
Q Consensus 70 ~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d-~~g~t~L~~Aa~~g 148 (634)
.|.||||+|+..|+.+++++|++ |+++|.+|..|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~ 121 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 121 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcC
Confidence 44555555555555555555555 55555555555555555555555555555555555555544 44555555555555
Q ss_pred CHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 006702 149 QTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQ 225 (634)
Q Consensus 149 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~ 225 (634)
+.+++++|++. |++++.+|..|.||||+|+..++. ..+.+||++|+..|..+++++|.+
T Consensus 122 ~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 122 RPEVVEALVEL-GADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEG 180 (183)
T ss_dssp CHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHc-CCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHH
Confidence 55555555544 555555555555555555442211 223455555555555555555544
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=9.9e-24 Score=190.59 Aligned_cols=131 Identities=27% Similarity=0.367 Sum_probs=83.3
Q ss_pred CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCCh
Q 006702 94 GGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRS 173 (634)
Q Consensus 94 gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t 173 (634)
|+|+ .+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t 78 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQH-KALVNTTGYQNDS 78 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCGGGCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCcccCcCCCCCC
Confidence 4555 5566677777777777777777777777777766666666666666666666666666655 6666666666666
Q ss_pred HHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 006702 174 PLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQA 226 (634)
Q Consensus 174 ~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 226 (634)
|||+|+..|+.+++++|++.|++++.+|..|.||||+|+..+..+++++|.+.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 66666666666666666666666666666666666666665555555555443
No 94
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=9e-23 Score=203.62 Aligned_cols=139 Identities=26% Similarity=0.241 Sum_probs=89.2
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccc-cCCChHHHHHHHhC
Q 006702 70 LGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAAD-MYGYQTTHVAAQYG 148 (634)
Q Consensus 70 ~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d-~~g~t~L~~Aa~~g 148 (634)
.|.||||+|+..|+.+++++|++ |+++|.+|..|.||||+|+..|+.++|++|+++|++++.++ ..|.||||+|+..|
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g 122 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 122 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC
Confidence 45666666666666666666666 66666666666666666666666666666666666666665 55666666666666
Q ss_pred CHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 006702 149 QTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAG 227 (634)
Q Consensus 149 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g 227 (634)
+.+++++|++. |++++.+|..|.||||+|+..+. +..+.||||+|+..|+.+++++|++++
T Consensus 123 ~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 123 RPEVVEALVEL-GADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp CHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 66666666655 66666666666666666654211 134567777777777777777777653
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=9.6e-23 Score=193.93 Aligned_cols=140 Identities=26% Similarity=0.292 Sum_probs=130.7
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAAD-HTGQTALHWSA 112 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~-~~g~tpLh~A~ 112 (634)
+..+.+|||.|++.|+.+.++.|++ +.+++.+|..|.||||+|+..|+.+++++|+++|+++|.++ ..|.||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 5678999999999999999999998 88999999999999999999999999999999999999998 88999999999
Q ss_pred HhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhh
Q 006702 113 VRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLF 192 (634)
Q Consensus 113 ~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 192 (634)
..|+.+++++|+++|++++.+|..|.||||+|+..++. ..+.++|++|+..|..+++++|.+
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINVLEG 180 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC------------------cccccHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999999975322 346799999999999999999976
Q ss_pred c
Q 006702 193 L 193 (634)
Q Consensus 193 ~ 193 (634)
+
T Consensus 181 ~ 181 (183)
T 3deo_A 181 Q 181 (183)
T ss_dssp C
T ss_pred h
Confidence 4
No 96
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=9.6e-23 Score=203.43 Aligned_cols=143 Identities=24% Similarity=0.262 Sum_probs=132.7
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAAD-HTGQTALHWSA 112 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~-~~g~tpLh~A~ 112 (634)
+..+.|+||.|++.|+.++++.|++ +.+++.+|..|.||||+|+..|+.+++++|+++|+++|.++ ..|.||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 3578999999999999999999998 88999999999999999999999999999999999999998 78999999999
Q ss_pred HhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhh
Q 006702 113 VRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLF 192 (634)
Q Consensus 113 ~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 192 (634)
..|+.+++++|+++|++++.+|..|.||||+|+..++ ...+.|||++|+..|+.+++++|++
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcChHHHHHHHHH
Confidence 9999999999999999999999999999999986322 2567899999999999999999998
Q ss_pred cCCC
Q 006702 193 LDAY 196 (634)
Q Consensus 193 ~ga~ 196 (634)
.+.+
T Consensus 182 ~~~~ 185 (244)
T 3ui2_A 182 QVFE 185 (244)
T ss_dssp HHEE
T ss_pred hccc
Confidence 6544
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=2.3e-22 Score=207.11 Aligned_cols=142 Identities=21% Similarity=0.207 Sum_probs=125.6
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhcCCCCCc------cccCCChHHHHHHHh---CCHHHHHHHHHccCCCCCCCCCCCC
Q 006702 102 HTGQTALHWSAVRGAIQVAELLLREGARVNA------ADMYGYQTTHVAAQY---GQTAFLYHIVSKWNADPDVPDNDGR 172 (634)
Q Consensus 102 ~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~------~d~~g~t~L~~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~g~ 172 (634)
....++|+.|+..|+.+.++.|++.|++++. .+..|.||||+|+.. ++.+++++|++. |++++.+|..|.
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-gadvn~~d~~G~ 227 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGN 227 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-SSCTTCCCTTCC
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-CCCCCCCCCCCC
Confidence 3456889999999999999999999999988 689999999999997 899999999998 999999999999
Q ss_pred hHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCCCHHHHHHhcCcH
Q 006702 173 SPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHR 252 (634)
Q Consensus 173 t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~~~d~~~~d~~g~Tpl~~A~~~~~~ 252 (634)
||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++ .|.||||+|++.|+.
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~--------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG--------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH--------TTSSCCC--------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC--------CCCChhHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999999999999843 588999999998875
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=7.2e-23 Score=200.86 Aligned_cols=134 Identities=21% Similarity=0.234 Sum_probs=83.8
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhc-CCCCCccccCCChHHHHHHH
Q 006702 68 DGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLRE-GARVNAADMYGYQTTHVAAQ 146 (634)
Q Consensus 68 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~-gad~~~~d~~g~t~L~~Aa~ 146 (634)
+..|.||||+||..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++ |++++.+|..|.||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 44566777777777777777777777777777777777777777777777777777776 67776666666666666666
Q ss_pred hCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCC
Q 006702 147 YGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDK 202 (634)
Q Consensus 147 ~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~ 202 (634)
.|+.+++++|++. |++++.+|..|.||||+|+..+..++++.|++.|+..+..+.
T Consensus 150 ~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 150 KGYADIVQLLLAK-GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp HTCHHHHHHHHHH-TCCSCCCCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred cCCHHHHHHHHHc-CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccch
Confidence 6666666666665 666666666666666666666666666666666665554443
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=2.8e-22 Score=206.50 Aligned_cols=143 Identities=20% Similarity=0.179 Sum_probs=125.7
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCC------CCCCCCcHHHHHHHh---CCHHHHHHHHhcCCCCCccccCCC
Q 006702 68 DGLGYYALQWAALNNRTAAAQYIIEHGGDVNA------ADHTGQTALHWSAVR---GAIQVAELLLREGARVNAADMYGY 138 (634)
Q Consensus 68 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~------~~~~g~tpLh~A~~~---g~~~iv~~Ll~~gad~~~~d~~g~ 138 (634)
.....++|+.|+..|+.+.++.|++.|++++. .+..|.||||+|+.. |+.+++++|+++|++++.+|..|.
T Consensus 148 ~~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~ 227 (301)
T 2b0o_E 148 CTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 227 (301)
T ss_dssp CC-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCC
T ss_pred cCchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCC
Confidence 34456899999999999999999999999998 688999999999997 899999999999999999999999
Q ss_pred hHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCH
Q 006702 139 QTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNL 217 (634)
Q Consensus 139 t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~ 217 (634)
||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|++ .|.||||+|+..|+.
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKG-RALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT-TCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred CHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 999999999999999999987 999999999999999999999999999999999886 478999999998864
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=4.1e-22 Score=176.45 Aligned_cols=108 Identities=27% Similarity=0.372 Sum_probs=58.7
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCC
Q 006702 70 LGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQ 149 (634)
Q Consensus 70 ~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~ 149 (634)
.|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGH 85 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 44555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHHccCCCCCCCCCCCChHHHHH
Q 006702 150 TAFLYHIVSKWNADPDVPDNDGRSPLHWA 178 (634)
Q Consensus 150 ~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 178 (634)
.+++++|++. |++++.+|..|.||||+|
T Consensus 86 ~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 86 VSCVKLLLSK-GADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp HHHHHHHHHT-TCCTTCCCTTSCCHHHHC
T ss_pred HHHHHHHHHc-CCCCCCcCCCCCCHHHHh
Confidence 5555555544 455555555555555554
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=1e-22 Score=199.85 Aligned_cols=129 Identities=22% Similarity=0.202 Sum_probs=116.5
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHH
Q 006702 100 ADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAA 179 (634)
Q Consensus 100 ~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 179 (634)
.+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++..|++++.+|..|.||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999998779999999999999999999
Q ss_pred hcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 006702 180 YKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGK 228 (634)
Q Consensus 180 ~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g~ 228 (634)
..|+.+++++|++.|++++.+|..|.||||+|+..++.++++.|++.|+
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDA 197 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccch
Confidence 9999999999999999999999999999999999999999999999984
No 102
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=8e-22 Score=174.57 Aligned_cols=115 Identities=22% Similarity=0.280 Sum_probs=107.2
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAV 113 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~ 113 (634)
...+.++||.|+..|+.+.++.|++ .+.+++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVA-KGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHH-TTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHH-cCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 3467899999999999999999998 789999999999999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCC
Q 006702 114 RGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQ 149 (634)
Q Consensus 114 ~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~ 149 (634)
.|+.+++++|+++|++++.+|..|.||||+|...+.
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 118 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAI 118 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHH
Confidence 999999999999999999999999999999954433
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=2e-20 Score=197.43 Aligned_cols=121 Identities=29% Similarity=0.347 Sum_probs=67.4
Q ss_pred chHHHHHHHc-CCHHHHHHHHhcCCCCCCCC--CCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhC
Q 006702 72 YYALQWAALN-NRTAAAQYIIEHGGDVNAAD--HTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYG 148 (634)
Q Consensus 72 ~t~Lh~Aa~~-g~~~~v~~Ll~~gad~n~~~--~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g 148 (634)
.|+||+|+.. |+.+++++|+++|+++|..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g 279 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILG 279 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 4555555555 55555555555555555555 45555555555555555555555555555555555555555555555
Q ss_pred CHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhc
Q 006702 149 QTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFL 193 (634)
Q Consensus 149 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 193 (634)
+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+..
T Consensus 280 ~~~~v~~LL~~-Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~ 323 (368)
T 3jue_A 280 HTGLACLFLKR-GADLGARDSEGRDPLTIAMETANADIVTLLRLA 323 (368)
T ss_dssp CHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHC-cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 55555555544 555555555555555555555555555555543
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=1.2e-19 Score=184.61 Aligned_cols=121 Identities=20% Similarity=0.199 Sum_probs=66.3
Q ss_pred cHHHHHHHhCCHHHHHHHHhcCCCCC------ccccCCChHHHHHHHh---CCHHHHHHHHHccCCCCCCCCCCCChHHH
Q 006702 106 TALHWSAVRGAIQVAELLLREGARVN------AADMYGYQTTHVAAQY---GQTAFLYHIVSKWNADPDVPDNDGRSPLH 176 (634)
Q Consensus 106 tpLh~A~~~g~~~iv~~Ll~~gad~~------~~d~~g~t~L~~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh 176 (634)
++|+.|+..|+.+.++.+++.|++++ ..|..|.||||+|+.. |+.+++++|++. |++++.+|..|.||||
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-SGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-CSCTTCCCTTCCCHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC-CCCccccCCCCCCHHH
Confidence 45555555555555555555555532 2245555555555555 455555555554 5555555555555555
Q ss_pred HHHhcCCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 006702 177 WAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAG 227 (634)
Q Consensus 177 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g 227 (634)
+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 555555555555555555555555555555555555555555555555554
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=2.9e-20 Score=196.15 Aligned_cols=149 Identities=19% Similarity=0.220 Sum_probs=120.0
Q ss_pred ccccchhhHHHHHHHc-CCHHHHHHHHhccCCCCcCCC--CCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q 006702 32 VDEESLRNDVYTAAAY-GDLEKLQRLVECEGCSVSEPD--GLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTAL 108 (634)
Q Consensus 32 ~~~~~~~~~L~~Aa~~-g~~~~v~~Ll~~~~~~~~~~d--~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpL 108 (634)
.......++||.|+.. |++++++.|++ .|++++..+ ..|.||||+|+..|+.+++++|+++|+++|.+|..|.|||
T Consensus 194 l~~~~~~t~L~~Aa~~~g~~~~v~~LL~-~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL 272 (368)
T 3jue_A 194 LGSLHPGALLFRASGHPPSLPTMADALA-HGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPL 272 (368)
T ss_dssp ---CCHHHHHHHHTSSSCCHHHHHHHHH-TTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cccCCCCcHHHHHHHccCCHHHHHHHHH-cCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 3344567899999999 99999999998 899999988 8999999999999999999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccC--CCCCCCCCCCChHHHHHHhc
Q 006702 109 HWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWN--ADPDVPDNDGRSPLHWAAYK 181 (634)
Q Consensus 109 h~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~--~~~~~~d~~g~t~Lh~A~~~ 181 (634)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+.... .+....+..+.|+++.+...
T Consensus 273 h~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 273 HHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987632 23334455667777766543
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=4.1e-20 Score=203.83 Aligned_cols=126 Identities=20% Similarity=0.235 Sum_probs=66.2
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCCC------CCCCCcHHHHHHH---hCCHHHHHHHHhcCCCCCccccCCChHHHH
Q 006702 73 YALQWAALNNRTAAAQYIIEHGGDVNAA------DHTGQTALHWSAV---RGAIQVAELLLREGARVNAADMYGYQTTHV 143 (634)
Q Consensus 73 t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~------~~~g~tpLh~A~~---~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~ 143 (634)
+.||.|+..|+.++++.|++.|+++|.. +..|.||||+|+. .|+.++|++|+++|+|++.+|..|.||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 4455555555555555555555555544 4455555555543 555555555555555555555555555555
Q ss_pred HHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCCCC
Q 006702 144 AAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGR 199 (634)
Q Consensus 144 Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~ 199 (634)
|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.|++++.
T Consensus 214 A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKG-RALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HTTTTCHHHHHHHHHT-CCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 5555555555555544 555555555555555555555555555555555555443
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=5.3e-20 Score=202.90 Aligned_cols=135 Identities=22% Similarity=0.282 Sum_probs=118.3
Q ss_pred hhHHHHHHHcCCHHHHHHHHhccCCCCcCC------CCCCchHHHHHHH---cCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q 006702 38 RNDVYTAAAYGDLEKLQRLVECEGCSVSEP------DGLGYYALQWAAL---NNRTAAAQYIIEHGGDVNAADHTGQTAL 108 (634)
Q Consensus 38 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~------d~~g~t~Lh~Aa~---~g~~~~v~~Ll~~gad~n~~~~~g~tpL 108 (634)
.+.|+.|+..|+.+.++.||+ .|++++.. |..|.||||+|+. .|+.+++++|+++|+|+|.+|..|.|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~-~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFA-NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHH-TTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHh-hcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 467999999999999999999 78999877 8899999999966 9999999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHh
Q 006702 109 HWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAY 180 (634)
Q Consensus 109 h~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 180 (634)
|+|+..|+.++|++|+++|||++.+|..|.||||+|+..|+.+++++|++. |++++. +|+|.+..
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~-ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA-QAGTFA------FPLHVDYS 276 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHT-CC------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh-CCCCCC------Ccceeecc
Confidence 999999999999999999999999999999999999999999999999987 888876 57776543
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=1.2e-19 Score=184.67 Aligned_cols=125 Identities=17% Similarity=0.219 Sum_probs=117.9
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCCC------CCCCCCCcHHHHHHHh---CCHHHHHHHHhcCCCCCccccCCChHHH
Q 006702 72 YYALQWAALNNRTAAAQYIIEHGGDVN------AADHTGQTALHWSAVR---GAIQVAELLLREGARVNAADMYGYQTTH 142 (634)
Q Consensus 72 ~t~Lh~Aa~~g~~~~v~~Ll~~gad~n------~~~~~g~tpLh~A~~~---g~~~iv~~Ll~~gad~~~~d~~g~t~L~ 142 (634)
.++|+.|+..|+.+.++.+++.|++++ ..+..|.||||+|+.. |+.+++++|+++|++++.+|..|.||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 468999999999999999999999954 4578899999999999 8999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCCHHHHHHHhhcCCCC
Q 006702 143 VAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYR 197 (634)
Q Consensus 143 ~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~ 197 (634)
+|+..|+.+++++|++. |++++.+|.+|.||||+|+..|+.+++++|++.|++.
T Consensus 211 ~A~~~g~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRG-KASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHc-CCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999987 9999999999999999999999999999999998854
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=1.9e-19 Score=150.93 Aligned_cols=89 Identities=37% Similarity=0.544 Sum_probs=53.0
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCH
Q 006702 71 GYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQT 150 (634)
Q Consensus 71 g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~ 150 (634)
|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 55666666666666666666666666666666666666666666666666666666666655555555555555555555
Q ss_pred HHHHHHHHc
Q 006702 151 AFLYHIVSK 159 (634)
Q Consensus 151 ~~v~~Ll~~ 159 (634)
+++++|++.
T Consensus 82 ~~~~~Ll~~ 90 (93)
T 1n0q_A 82 EVVKLLLEA 90 (93)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 555555544
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.79 E-value=5.9e-19 Score=147.93 Aligned_cols=91 Identities=40% Similarity=0.609 Sum_probs=45.0
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHHhcCC
Q 006702 104 GQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGF 183 (634)
Q Consensus 104 g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~ 183 (634)
|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCC
Confidence 45555555555555555555555555555555444444444444444444444443 44444444444444444444444
Q ss_pred HHHHHHHhhcCC
Q 006702 184 ADCIRLLLFLDA 195 (634)
Q Consensus 184 ~~~v~~Ll~~ga 195 (634)
.+++++|++.|+
T Consensus 81 ~~~~~~Ll~~ga 92 (93)
T 1n0q_A 81 LEVVKLLLEAGA 92 (93)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 444444444443
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=1.3e-19 Score=158.04 Aligned_cols=63 Identities=37% Similarity=0.515 Sum_probs=25.6
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCC
Q 006702 69 GLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVN 131 (634)
Q Consensus 69 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~ 131 (634)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 7 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 69 (115)
T 2l6b_A 7 KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN 69 (115)
T ss_dssp CSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc
Confidence 334444444444444444444444444444444444444444444444444444444333333
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=3.1e-19 Score=155.76 Aligned_cols=107 Identities=28% Similarity=0.373 Sum_probs=57.1
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHHHHHHhCCHHHHHHHHHccCCCCCCCCCCCChHHHHHH
Q 006702 100 ADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTHVAAQYGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAA 179 (634)
Q Consensus 100 ~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 179 (634)
+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++. |++++.+|..|.||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK-GADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTT-TCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCCHHHHHH
Confidence 445566666666666666666666666655555555555555555555555555555544 4555555555555555555
Q ss_pred hcCCHHHHHHHhhcCCCCCCCCCCCCcH
Q 006702 180 YKGFADCIRLLLFLDAYRGRQDKEGCTP 207 (634)
Q Consensus 180 ~~g~~~~v~~Ll~~ga~~~~~d~~g~Tp 207 (634)
..|+.+++++|++.|++++.++..|.||
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 5555555555555555555544444443
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.70 E-value=4.3e-17 Score=141.17 Aligned_cols=89 Identities=30% Similarity=0.414 Sum_probs=44.0
Q ss_pred ccchhhHHHHHHHcCCHHHHHHHHhccCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 006702 34 EESLRNDVYTAAAYGDLEKLQRLVECEGCSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAV 113 (634)
Q Consensus 34 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~ 113 (634)
+..+.++||.|+..|+.++++.|++ .+++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMA-NGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence 3344455555555555555555554 344444444455555555555555555555555555555555455555555555
Q ss_pred hCCHHHHHHH
Q 006702 114 RGAIQVAELL 123 (634)
Q Consensus 114 ~g~~~iv~~L 123 (634)
.|+.+++++|
T Consensus 100 ~~~~~~~~~L 109 (110)
T 2zgd_A 100 NGNEDLAEIL 109 (110)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 5555554443
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.67 E-value=4.1e-16 Score=134.99 Aligned_cols=94 Identities=28% Similarity=0.344 Sum_probs=86.3
Q ss_pred CCcCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCccccCCChHHH
Q 006702 63 SVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAIQVAELLLREGARVNAADMYGYQTTH 142 (634)
Q Consensus 63 ~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad~n~~~~~g~tpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~ 142 (634)
.....|.+|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHH
Q 006702 143 VAAQYGQTAFLYHI 156 (634)
Q Consensus 143 ~Aa~~g~~~~v~~L 156 (634)
+|+..|+.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999999876
No 115
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=61.32 E-value=3.2 Score=29.29 Aligned_cols=27 Identities=26% Similarity=0.586 Sum_probs=23.4
Q ss_pred cccccccccccCCCCCCCCcchhhhhc
Q 006702 376 SQLCATCKIVRPLRAKHCSTCDRCVEQ 402 (634)
Q Consensus 376 ~~~C~~C~~~kP~Rs~HC~~C~~CV~r 402 (634)
.++|+.|....|+++..|+.|+.--+|
T Consensus 14 k~iCpkC~a~~~~gaw~CrKCG~~~lr 40 (51)
T 3j21_g 14 KYVCLRCGATNPWGAKKCRKCGYKRLR 40 (51)
T ss_dssp EEECTTTCCEECTTCSSCSSSSSCCCE
T ss_pred CccCCCCCCcCCCCceecCCCCCcccc
Confidence 588999999999999999999875443
No 116
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=60.36 E-value=3.2 Score=29.69 Aligned_cols=27 Identities=26% Similarity=0.779 Sum_probs=23.2
Q ss_pred cccccccccccCCCCCCCCcchhhhhc
Q 006702 376 SQLCATCKIVRPLRAKHCSTCDRCVEQ 402 (634)
Q Consensus 376 ~~~C~~C~~~kP~Rs~HC~~C~~CV~r 402 (634)
.++|..|...-|+|+.-|+.|+..-+|
T Consensus 19 k~ICrkC~ARnp~~A~~CRKCg~~~LR 45 (56)
T 2ayj_A 19 KKVCRKCGALNPIRATKCRRCHSTNLR 45 (56)
T ss_dssp CEEETTTCCEECTTCSSCTTTCCCCEE
T ss_pred hhhhccccCcCCcccccccCCCCCCCC
Confidence 579999999999999999998865443
No 117
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=37.49 E-value=83 Score=24.23 Aligned_cols=33 Identities=12% Similarity=0.043 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhh
Q 006702 473 IADFSLFFGVAVLTAVQASQISRNITTNEMANA 505 (634)
Q Consensus 473 ~~~~~~~~~~~~l~~~~~~~i~~n~TT~E~~~~ 505 (634)
++...+++++..|+++.+.......--++.+.+
T Consensus 17 vi~gilliGllllliwk~~~~i~DrrE~~kFEk 49 (79)
T 2knc_B 17 VMGAILLIGLAALLIWKLLITIHDRKEFAKFEE 49 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444555556666666555555555544443
No 118
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=30.03 E-value=15 Score=31.29 Aligned_cols=25 Identities=28% Similarity=0.639 Sum_probs=17.6
Q ss_pred cccccccccc--cCCCCCCCCcchhhh
Q 006702 376 SQLCATCKIV--RPLRAKHCSTCDRCV 400 (634)
Q Consensus 376 ~~~C~~C~~~--kP~Rs~HC~~C~~CV 400 (634)
...|..|... -..|-|||+.||+.+
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vf 95 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIF 95 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEE
T ss_pred CCCCcCcCCccccccccccCCCCCeEE
Confidence 3568888763 346889999998643
No 119
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.47 E-value=16 Score=28.54 Aligned_cols=24 Identities=21% Similarity=0.548 Sum_probs=17.0
Q ss_pred cccccccccc--cCCCCCCCCcchhh
Q 006702 376 SQLCATCKIV--RPLRAKHCSTCDRC 399 (634)
Q Consensus 376 ~~~C~~C~~~--kP~Rs~HC~~C~~C 399 (634)
...|..|... --.|-|||+.||+-
T Consensus 14 ~~~C~~C~~~F~~~~RrHHCR~CG~v 39 (84)
T 1x4u_A 14 FGNCTGCSATFSVLKKRRSCSNCGNS 39 (84)
T ss_dssp CSSCSSSCCCCCSSSCCEECSSSCCE
T ss_pred CCcCcCcCCccccchhhhhhcCCCcE
Confidence 3568888753 34688999998863
No 120
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=27.11 E-value=15 Score=27.98 Aligned_cols=24 Identities=25% Similarity=0.620 Sum_probs=16.5
Q ss_pred ccccccccc--cCCCCCCCCcchhhh
Q 006702 377 QLCATCKIV--RPLRAKHCSTCDRCV 400 (634)
Q Consensus 377 ~~C~~C~~~--kP~Rs~HC~~C~~CV 400 (634)
..|..|... .-.|-|||+.||+-+
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~ 37 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVF 37 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEE
T ss_pred CcccCCCCccCCccccccCCCCCEEE
Confidence 357777753 245889999988643
No 121
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=25.00 E-value=17 Score=34.16 Aligned_cols=24 Identities=25% Similarity=0.819 Sum_probs=17.8
Q ss_pred ccccccccc--cCCCCCCCCcchhhh
Q 006702 377 QLCATCKIV--RPLRAKHCSTCDRCV 400 (634)
Q Consensus 377 ~~C~~C~~~--kP~Rs~HC~~C~~CV 400 (634)
..|..|... --.|-|||+.||+.+
T Consensus 162 ~~C~~C~~~F~~~~rrhhCr~CG~v~ 187 (220)
T 1dvp_A 162 RVCHRCRVEFTFTNRKHHCRNCGQVF 187 (220)
T ss_dssp SBCTTTCCBCCSSSCCEECTTTCCEE
T ss_pred CccCCCCCccCCcccccccCCcCCEE
Confidence 578888753 245889999998754
No 122
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=22.88 E-value=24 Score=27.46 Aligned_cols=25 Identities=24% Similarity=0.647 Sum_probs=17.4
Q ss_pred cccccccccc--cCCCCCCCCcchhhh
Q 006702 376 SQLCATCKIV--RPLRAKHCSTCDRCV 400 (634)
Q Consensus 376 ~~~C~~C~~~--kP~Rs~HC~~C~~CV 400 (634)
...|..|... --.|-|||+.||+.+
T Consensus 19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~ 45 (82)
T 2yw8_A 19 ATHCRQCEKEFSISRRKHHCRNCGHIF 45 (82)
T ss_dssp CCBCTTTCCBCBTTBCCEECTTTCCEE
T ss_pred CCcccCcCCcccCccccccCCCCCCEE
Confidence 4568888753 245889999988643
No 123
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=21.57 E-value=37 Score=23.65 Aligned_cols=18 Identities=28% Similarity=0.796 Sum_probs=13.0
Q ss_pred ccccccccCCCCCCCCcc
Q 006702 379 CATCKIVRPLRAKHCSTC 396 (634)
Q Consensus 379 C~~C~~~kP~Rs~HC~~C 396 (634)
|..|...-||--.||..|
T Consensus 14 C~~C~k~N~Pl~ryC~rC 31 (53)
T 2cr8_A 14 CTECKKFNSPSKRYCFRC 31 (53)
T ss_dssp CSSSCCEECSSCCBCTTT
T ss_pred cccccccCCCccchhHHH
Confidence 777777777777776655
No 124
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=21.37 E-value=53 Score=21.40 Aligned_cols=23 Identities=30% Similarity=0.534 Sum_probs=17.6
Q ss_pred chhhHHHHHHHcCCHHHHHHHHh
Q 006702 36 SLRNDVYTAAAYGDLEKLQRLVE 58 (634)
Q Consensus 36 ~~~~~L~~Aa~~g~~~~v~~Ll~ 58 (634)
..+..++.|+..||.+.++.|-.
T Consensus 12 aiEQqiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 12 AIRKQMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHH
Confidence 35666888888899988887743
No 125
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=21.06 E-value=80 Score=33.58 Aligned_cols=113 Identities=14% Similarity=0.099 Sum_probs=58.3
Q ss_pred hhhHHHHHHHcCCHHHHHHHHh---ccCCCCcCCCCCCchHHHHHHHcC-C-------------HHHHHHHHhcCCCCCC
Q 006702 37 LRNDVYTAAAYGDLEKLQRLVE---CEGCSVSEPDGLGYYALQWAALNN-R-------------TAAAQYIIEHGGDVNA 99 (634)
Q Consensus 37 ~~~~L~~Aa~~g~~~~v~~Ll~---~~~~~~~~~d~~g~t~Lh~Aa~~g-~-------------~~~v~~Ll~~gad~n~ 99 (634)
....|-..++.|+++....+++ ..|..++.. -++.|..|+... . .++.+.+.+.|..+|.
T Consensus 29 l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~---tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~ 105 (501)
T 4g26_A 29 LKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQY---HYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNE 105 (501)
T ss_dssp HHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHH---HHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHh---HHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCH
Confidence 4455667778999988887776 245544332 234555454322 1 2455555666665554
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHH----HHhcCCCCCccccCCChHHHHHHHhCCHHHHHHH
Q 006702 100 ADHTGQTALHWSAVRGAIQVAEL----LLREGARVNAADMYGYQTTHVAAQYGQTAFLYHI 156 (634)
Q Consensus 100 ~~~~g~tpLh~A~~~g~~~iv~~----Ll~~gad~~~~d~~g~t~L~~Aa~~g~~~~v~~L 156 (634)
.. -.+.+...++.|+.+-+.. +.+.|..++.... .+.+...++.|+.+-+..+
T Consensus 106 ~t--yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty--n~lI~~~~~~g~~~~A~~l 162 (501)
T 4g26_A 106 AT--FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY--GPALFGFCRKGDADKAYEV 162 (501)
T ss_dssp HH--HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHH
T ss_pred HH--HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee--hHHHHHHHHCCCHHHHHHH
Confidence 31 1233445566777654433 3345655544321 1233444556665544333
No 126
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=20.35 E-value=30 Score=27.02 Aligned_cols=25 Identities=28% Similarity=0.777 Sum_probs=17.6
Q ss_pred cccccccccc--cCCCCCCCCcchhhh
Q 006702 376 SQLCATCKIV--RPLRAKHCSTCDRCV 400 (634)
Q Consensus 376 ~~~C~~C~~~--kP~Rs~HC~~C~~CV 400 (634)
...|..|... --.|-|||+.|++-+
T Consensus 21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~ 47 (84)
T 1z2q_A 21 APACNGCGCVFTTTVRRHHCRNCGYVL 47 (84)
T ss_dssp CCBCTTTCCBCCTTSCCEECTTTCCEE
T ss_pred CCCCcCcCCccccchhcccccCCCcEE
Confidence 4568888753 235889999988643
No 127
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=20.29 E-value=25 Score=27.81 Aligned_cols=23 Identities=22% Similarity=0.561 Sum_probs=16.9
Q ss_pred ccccccccc--cCCCCCCCCcchhh
Q 006702 377 QLCATCKIV--RPLRAKHCSTCDRC 399 (634)
Q Consensus 377 ~~C~~C~~~--kP~Rs~HC~~C~~C 399 (634)
..|..|... .-.|-|||+.|++-
T Consensus 10 ~~C~~C~~~F~~~~RrHHCR~CG~v 34 (88)
T 1wfk_A 10 SRCYGCAVKFTLFKKEYGCKNCGRA 34 (88)
T ss_dssp SBCTTTCCBCCSSSCEEECSSSCCE
T ss_pred CCCcCcCCcccCccccccCCCCCCE
Confidence 568888763 34688999999864
No 128
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=20.06 E-value=33 Score=27.20 Aligned_cols=25 Identities=24% Similarity=0.739 Sum_probs=17.0
Q ss_pred cccccccccc--cCCCCCCCCcchhhh
Q 006702 376 SQLCATCKIV--RPLRAKHCSTCDRCV 400 (634)
Q Consensus 376 ~~~C~~C~~~--kP~Rs~HC~~C~~CV 400 (634)
...|..|... --.|-|||+.||+.+
T Consensus 20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~ 46 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKRRHHCRACGKVF 46 (90)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEE
T ss_pred CCcCcCCCCcccchhhCccccCCCCEE
Confidence 3568888752 235789999887643
Done!