BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006705
(634 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/627 (72%), Positives = 519/627 (82%), Gaps = 8/627 (1%)
Query: 16 FTQQQLTVPSFPPNPQN--------LKTLCSNGQLTKALIEMATLGLEMRFEEYDTLLNA 67
F +L SF +P N + LCSNG+L +AL+EMA LG EM F YD LLNA
Sbjct: 2 FNLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNA 61
Query: 68 CVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSW 127
C+++R LR GQRVHAHMIKT Y P YLRTRL++FY KC+CL DARK+ DEM E+NVVSW
Sbjct: 62 CLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSW 121
Query: 128 TAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIK 187
TAMIS YSQ HS EAL +F M+RSD +PNEFTFATVLTSC A G LGKQIH LI+K
Sbjct: 122 TAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK 181
Query: 188 SNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIEL 247
N++SHI+VGSSLLDMYAKAG+I EAR +FECLPERDVVSCTAII+GYAQLGLDEEA+E+
Sbjct: 182 WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEM 241
Query: 248 FRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSK 307
F +L EGM NYVTYAS+LTALSGLA L HGKQ H HVLR E+P Y VLQNSLIDMYSK
Sbjct: 242 FHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSK 301
Query: 308 CGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLA 367
CG+L+Y+RR+FDNM ERT ISWNAMLVGYSKHG+GREV+ELF LMR+E +VKPD+VT LA
Sbjct: 302 CGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 361
Query: 368 VLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPF 427
VLSGCSHG MED GL +F +V + G +P EHYGC+VDMLGRAGR+ EA EFIK MP
Sbjct: 362 VLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPS 421
Query: 428 EPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRV 487
+PTA +LGSLLGACRVH +VDIGE VG+RL+EIEPENAGNYVILSNLYASAGRW DV V
Sbjct: 422 KPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNV 481
Query: 488 RELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDM 547
R +M +KAVTK+PGRSWI+ +Q LH FHA+DR+HP REE+ AK+K++S+K K+AGYVPD+
Sbjct: 482 RAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDL 541
Query: 548 SCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKV 607
SCVLYDVDEEQKEK+LLGHSEKLALTFGLI T EG PIRV KNLRICVDCHNFAK SKV
Sbjct: 542 SCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKV 601
Query: 608 YGRKVSLRDKNRFHHIVEGTCSCGDYW 634
+ R+VSLRDKNRFH IV+G CSCGDYW
Sbjct: 602 FEREVSLRDKNRFHQIVDGICSCGDYW 628
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/609 (41%), Positives = 390/609 (64%), Gaps = 12/609 (1%)
Query: 26 FPPNPQNLKTLCSNGQLTKALIEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMI 85
FP N L+T ++ +E + + + RF Y+TLL C + L G+ VHAH++
Sbjct: 37 FPSNDLLLRTSSND-------LEGSYIPADRRF--YNTLLKKCTVFKLLIQGRIVHAHIL 87
Query: 86 KTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALN 145
++ +R + + L+ Y KC L +ARK+F++M +R+ V+WT +IS YSQ +AL
Sbjct: 88 QSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALL 147
Query: 146 LFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYA 205
F +MLR PNEFT ++V+ + A G Q+H +K F+S+++VGS+LLD+Y
Sbjct: 148 FFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYT 207
Query: 206 KAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYAS 265
+ G + +A+ VF+ L R+ VS A+I+G+A+ E+A+ELF+ + +G ++ +YAS
Sbjct: 208 RYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYAS 267
Query: 266 VLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERT 325
+ A S L GK VH+++++ N+L+DMY+K GS+ +R++FD +++R
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRD 327
Query: 326 VISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVF 385
V+SWN++L Y++HG G+E V F MR ++P+ +++L+VL+ CSH G+ D G +
Sbjct: 328 VVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG-IRPNEISFLSVLTACSHSGLLDEGWH-Y 385
Query: 386 HEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHY 445
+E++ KDG PE HY VVD+LGRAG + AL FI+ MP EPTAAI +LL ACR+H
Sbjct: 386 YELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHK 444
Query: 446 NVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWI 505
N ++G + + + E++P++ G +VIL N+YAS GRW D RVR+ MKE V K+P SW+
Sbjct: 445 NTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Query: 506 ELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLG 565
E++ +H F A+D HP REE++ K +++ K KE GYVPD S V+ VD++++E L
Sbjct: 505 EIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQY 564
Query: 566 HSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVE 625
HSEK+AL F L+ TP G+ I + KN+R+C DCH K SKV GR++ +RD NRFHH +
Sbjct: 565 HSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKD 624
Query: 626 GTCSCGDYW 634
G CSC DYW
Sbjct: 625 GNCSCKDYW 633
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/612 (39%), Positives = 384/612 (62%), Gaps = 9/612 (1%)
Query: 29 NPQNLKTLCSNGQLTKALIEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTC 88
N Q +++LC G+L +A I + + + Y+ L+ C ++ +L RVH H++
Sbjct: 49 NNQLIQSLCKEGKLKQA-IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNG 107
Query: 89 YRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFI 148
+L T+LI Y+ + ARK+FD+ R+R + W A+ A + H E L L+
Sbjct: 108 SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYW 167
Query: 149 RMLRSDTEPNEFTFATVLTSCAGA----FGFELGKQIHSLIIKSNFESHIYVGSSLLDMY 204
+M R E + FT+ VL +C + GK+IH+ + + + SH+Y+ ++L+DMY
Sbjct: 168 KMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMY 227
Query: 205 AKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMIS--NYVT 262
A+ G + A VF +P R+VVS +A+I+ YA+ G EA+ FR++ E S N VT
Sbjct: 228 ARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVT 287
Query: 263 YASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMS 322
SVL A + LAAL GK +H ++LR + S + + ++L+ MY +CG L +RVFD M
Sbjct: 288 MVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH 347
Query: 323 ERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGL 382
+R V+SWN+++ Y HG G++ +++F M N P VT+++VL CSH G+ + G
Sbjct: 348 DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA-NGASPTPVTFVSVLGACSHEGLVEEGK 406
Query: 383 AVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACR 442
+F E + G +P+IEHY C+VD+LGRA R+ EA + +++M EP + GSLLG+CR
Sbjct: 407 RLF-ETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCR 465
Query: 443 VHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGR 502
+H NV++ E +RL +EP+NAGNYV+L+++YA A W++V RV++L++ + + K PGR
Sbjct: 466 IHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGR 525
Query: 503 SWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKV 562
W+E+ + +++F + D +P+ E++ A + +L+ KE GY+P VLY+++ E+KE++
Sbjct: 526 CWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERI 585
Query: 563 LLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHH 622
+LGHSEKLAL FGLI T +G PIR+ KNLR+C DCH F KF+SK +++ +RD NRFH
Sbjct: 586 VLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHR 645
Query: 623 IVEGTCSCGDYW 634
G CSCGDYW
Sbjct: 646 FKNGVCSCGDYW 657
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/619 (40%), Positives = 380/619 (61%), Gaps = 19/619 (3%)
Query: 33 LKTLCSNGQLTKAL---IEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKT-C 88
L +LC N QL +AL EM G+E ++L AC + LR G+ +HA+ +K
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 89 YRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFI 148
++ + L+ Y C+ + R++FD M +R + W AMI+ YSQ H EAL LFI
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 149 RMLRS-DTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKA 207
M S N T A V+ +C + F + IH ++K + +V ++L+DMY++
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 208 GRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQ-VEGMIS-------- 258
G+I A +F + +RD+V+ +I+GY E+A+ L K+Q +E +S
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 259 --NYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRR 316
N +T ++L + + L+AL GK++H++ ++ + + V + ++L+DMY+KCG L SR+
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 317 VFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGG 376
VFD + ++ VI+WN +++ Y HG G+E ++L +M + VKP+ VT+++V + CSH G
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG-VKPNEVTFISVFAACSHSG 632
Query: 377 MEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFE-PTAAILG 435
M D GL +F+ ++ G EP +HY CVVD+LGRAGR+ EA + + MP + A
Sbjct: 633 MVDEGLRIFY-VMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWS 691
Query: 436 SLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKA 495
SLLGA R+H N++IGE Q L+++EP A +YV+L+N+Y+SAG W+ T VR MKE+
Sbjct: 692 SLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQG 751
Query: 496 VTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVD 555
V K+PG SWIE +H F A D SHP E+LS ++ L + ++ GYVPD SCVL++V+
Sbjct: 752 VRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVE 811
Query: 556 EEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLR 615
E++KE +L GHSEKLA+ FG++ T G IRV KNLR+C DCH KF+SK+ R++ LR
Sbjct: 812 EDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILR 871
Query: 616 DKNRFHHIVEGTCSCGDYW 634
D RFH GTCSCGDYW
Sbjct: 872 DVRRFHRFKNGTCSCGDYW 890
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 198/386 (51%), Gaps = 12/386 (3%)
Query: 47 IEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYR-PPVYLRTRLIVFYNK 105
++M LG++ + LL A + + + G+++HAH+ K Y V + L+ Y K
Sbjct: 86 VDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRK 145
Query: 106 CECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATV 165
C K+FD + ERN VSW ++IS+ AL F ML + EP+ FT +V
Sbjct: 146 CGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSV 205
Query: 166 LTSCAG---AFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPE 222
+T+C+ G +GKQ+H+ ++ E + ++ ++L+ MY K G++ ++ +
Sbjct: 206 VTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG 264
Query: 223 RDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQV 282
RD+V+ ++S Q EA+E R++ +EG+ + T +SVL A S L L GK++
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 283 HSHVLR---FEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKH 339
H++ L+ + S+V ++L+DMY C + RRVFD M +R + WNAM+ GYS++
Sbjct: 325 HAYALKNGSLDENSFV--GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 340 GMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEI 399
+E + LF M E + +S T V+ C G R A+ +V K G + +
Sbjct: 383 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV--KRGLDRDR 440
Query: 400 EHYGCVVDMLGRAGRVGEALEFIKNM 425
++DM R G++ A+ M
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 196/379 (51%), Gaps = 18/379 (4%)
Query: 63 TLLNACVNQRTLRG---GQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEM 119
+++ AC N G G++VHA+ ++ + T L+ Y K L+ ++ +
Sbjct: 204 SVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSF 262
Query: 120 RERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGK 179
R++V+W ++S+ Q EAL M+ EP+EFT ++VL +C+ GK
Sbjct: 263 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Query: 180 QIHSLIIKS-NFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQL 238
++H+ +K+ + + + +VGS+L+DMY ++ R VF+ + +R + A+I+GY+Q
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 239 GLDEEAIELFRKL-QVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVL 297
D+EA+ LF + + G+++N T A V+ A A + +H V++ + +
Sbjct: 383 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFV 442
Query: 298 QNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGY--SKHGMGREVV--ELFNLMR 353
QN+L+DMYS+ G + + R+F M +R +++WN M+ GY S+H ++ ++ NL R
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 502
Query: 354 EENK------VKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVD 407
+ +K +KP+S+T + +L C+ +G + + K+ ++ +VD
Sbjct: 503 KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI--KNNLATDVAVGSALVD 560
Query: 408 MLGRAGRVGEALEFIKNMP 426
M + G + + + +P
Sbjct: 561 MYAKCGCLQMSRKVFDQIP 579
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 124/238 (52%), Gaps = 8/238 (3%)
Query: 142 EALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFE-SHIYVGSSL 200
EA+ ++ M+ +P+ + F +L + A ELGKQIH+ + K + + V ++L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 201 LDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNY 260
+++Y K G VF+ + ER+ VS ++IS E A+E FR + E + +
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 261 VTYASVLTALSGLA---ALGHGKQVHSHVLR-FEIPSYVVLQNSLIDMYSKCGSLTYSRR 316
T SV+TA S L L GKQVH++ LR E+ S+++ N+L+ MY K G L S+
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLASSKV 257
Query: 317 VFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSH 374
+ + R +++WN +L ++ E +E M E V+PD T +VL CSH
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSH 314
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/614 (39%), Positives = 374/614 (60%), Gaps = 14/614 (2%)
Query: 33 LKTLCSNGQLTKALI---EMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCY 89
+ L +G +AL+ M L L + + AC + + G++ H Y
Sbjct: 48 IADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGY 107
Query: 90 RPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIR 149
+ +++ + LIV Y+ C L DARK+FDE+ +RN+VSWT+MI Y ++ +A++LF
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKD 167
Query: 150 MLRSDTEPNEFTF------ATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDM 203
+L + + ++ F +V+++C+ L + IHS +IK F+ + VG++LLD
Sbjct: 168 LLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDA 227
Query: 204 YAKAGR--IHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMIS-NY 260
YAK G + AR +F+ + ++D VS +I+S YAQ G+ EA E+FR+L +++ N
Sbjct: 228 YAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNA 287
Query: 261 VTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDN 320
+T ++VL A+S AL GK +H V+R + V++ S+IDMY KCG + +R+ FD
Sbjct: 288 ITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDR 347
Query: 321 MSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDR 380
M + V SW AM+ GY HG + +ELF M + V+P+ +T+++VL+ CSH G+
Sbjct: 348 MKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYITFVSVLAACSHAGLHVE 406
Query: 381 GLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGA 440
G F+ + + G EP +EHYGC+VD+LGRAG + +A + I+ M +P + I SLL A
Sbjct: 407 GWRWFNAM-KGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
Query: 441 CRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDP 500
CR+H NV++ E RL E++ N G Y++LS++YA AGRW+DV RVR +MK + + K P
Sbjct: 466 CRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPP 525
Query: 501 GRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKE 560
G S +EL+ +H F D HP RE++ + +L+ K EAGYV + S V +DVDEE+KE
Sbjct: 526 GFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKE 585
Query: 561 KVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRF 620
L HSEKLA+ FG++ T G+ + V+KNLR+C DCHN K +SK+ R+ +RD RF
Sbjct: 586 MTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRF 645
Query: 621 HHIVEGTCSCGDYW 634
HH +G CSCGDYW
Sbjct: 646 HHFKDGGCSCGDYW 659
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 170/324 (52%), Gaps = 13/324 (4%)
Query: 123 NVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIH 182
+V SW ++I+ ++ S EAL F M + P +F + +C+ F GKQ H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 183 SLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDE 242
++S I+V S+L+ MY+ G++ +AR VF+ +P+R++VS T++I GY G
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 243 EAIELFRKLQV------EGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVV 296
+A+ LF+ L V + M + + SV++A S + A G + +HS V++ V
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 297 LQNSLIDMYSKC--GSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMRE 354
+ N+L+D Y+K G + +R++FD + ++ +S+N+++ Y++ GM E E+F + +
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 355 ENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGR 414
V +++T VL SH G G + +++ + G E ++ ++DM + GR
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVI--RMGLEDDVIVGTSIIDMYCKCGR 337
Query: 415 VG---EALEFIKNMPFEPTAAILG 435
V +A + +KN A++
Sbjct: 338 VETARKAFDRMKNKNVRSWTAMIA 361
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/625 (39%), Positives = 375/625 (60%), Gaps = 17/625 (2%)
Query: 13 SLTFTQQQLTVPSFPPNPQNLKTLCSNGQLTKALIEMATL---GLEMRFEEYDTLLNACV 69
S + T Q L + F LC L +A+ M +L GL Y L+ C+
Sbjct: 20 SYSSTDQTLLLSEFT-------RLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCI 72
Query: 70 NQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTA 129
+ R + G + H+ +RP ++L LI Y K L+DA ++FD+M +RNV+SWT
Sbjct: 73 SNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTT 132
Query: 130 MISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSN 189
MISAYS+ +AL L + MLR + PN +T+++VL SC G + +H IIK
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEG 189
Query: 190 FESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFR 249
ES ++V S+L+D++AK G +A VF+ + D + +II G+AQ + A+ELF+
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 250 KLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCG 309
+++ G I+ T SVL A +GLA L G Q H H+++++ ++L N+L+DMY KCG
Sbjct: 250 RMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCG 307
Query: 310 SLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVL 369
SL + RVF+ M ER VI+W+ M+ G +++G +E ++LF M+ KP+ +T + VL
Sbjct: 308 SLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG-TKPNYITIVGVL 366
Query: 370 SGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEP 429
CSH G+ + G F + G +P EHYGC++D+LG+AG++ +A++ + M EP
Sbjct: 367 FACSHAGLLEDGWYYFRSMKKLY-GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEP 425
Query: 430 TAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRE 489
A +LLGACRV N+ + E+ ++++ ++PE+AG Y +LSN+YA++ +W+ V +R
Sbjct: 426 DAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRT 485
Query: 490 LMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSC 549
M+++ + K+PG SWIE+++ +H F D SHP E+S K+ QL + GYVP+ +
Sbjct: 486 RMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNF 545
Query: 550 VLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYG 609
VL D++ EQ E L HSEKLAL FGL+ P IR+ KNLRIC DCH F K SK+
Sbjct: 546 VLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEI 605
Query: 610 RKVSLRDKNRFHHIVEGTCSCGDYW 634
R + +RD R+HH +G CSCGDYW
Sbjct: 606 RSIVIRDPIRYHHFQDGKCSCGDYW 630
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/578 (39%), Positives = 372/578 (64%), Gaps = 11/578 (1%)
Query: 61 YDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMR 120
+ +++ C N + LR +++H ++K + +RT L+V Y+KC + DA ++F E+
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG 357
Query: 121 -ERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGK 179
NVVSWTAMIS + Q EA++LF M R PNEFT++ +LT A
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT----ALPVISPS 413
Query: 180 QIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLG 239
++H+ ++K+N+E VG++LLD Y K G++ EA VF + ++D+V+ +A+++GYAQ G
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 240 LDEEAIELFRKLQVEGMISNYVTYASVLTALSGL-AALGHGKQVHSHVLRFEIPSYVVLQ 298
E AI++F +L G+ N T++S+L + A++G GKQ H ++ + S + +
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533
Query: 299 NSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKV 358
++L+ MY+K G++ + VF E+ ++SWN+M+ GY++HG + +++F M++ KV
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR-KV 592
Query: 359 KPDSVTYLAVLSGCSHGGMEDRGLAVFHEIV-DCKDGFEPEIEHYGCVVDMLGRAGRVGE 417
K D VT++ V + C+H G+ + G F +V DCK P EH C+VD+ RAG++ +
Sbjct: 593 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK--IAPTKEHNSCMVDLYSRAGQLEK 650
Query: 418 ALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYAS 477
A++ I+NMP + I ++L ACRVH ++G ++++ ++PE++ YV+LSN+YA
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAE 710
Query: 478 AGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVK 537
+G W++ +VR+LM E+ V K+PG SWIE+ ++F A DRSHP+++++ K++ LS +
Sbjct: 711 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTR 770
Query: 538 FKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDC 597
K+ GY PD S VL D+D+E KE VL HSE+LA+ FGLI TP+G+P+ +IKNLR+C DC
Sbjct: 771 LKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDC 830
Query: 598 HNFAKFVSKVYGRKVSLRDKNRFHHI-VEGTCSCGDYW 634
H K ++K+ R++ +RD NRFHH +G CSCGD+W
Sbjct: 831 HLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 181/321 (56%), Gaps = 2/321 (0%)
Query: 52 LGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSD 111
LG+EM + ++L G+++H IK + V + T L+ Y K D
Sbjct: 87 LGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD 146
Query: 112 ARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAG 171
RK+FDEM+ERNVV+WT +IS Y++ + + E L LF+RM T+PN FTFA L A
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE 206
Query: 172 AFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAI 231
G Q+H++++K+ + I V +SL+++Y K G + +AR +F+ + VV+ ++
Sbjct: 207 EGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSM 266
Query: 232 ISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEI 291
ISGYA GLD EA+ +F +++ + + ++ASV+ + L L +Q+H V+++
Sbjct: 267 ISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGF 326
Query: 292 PSYVVLQNSLIDMYSKCGSLTYSRRVFDNMS-ERTVISWNAMLVGYSKHGMGREVVELFN 350
++ +L+ YSKC ++ + R+F + V+SW AM+ G+ ++ E V+LF+
Sbjct: 327 LFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFS 386
Query: 351 LMREENKVKPDSVTYLAVLSG 371
M+ + V+P+ TY +L+
Sbjct: 387 EMKRKG-VRPNEFTYSVILTA 406
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 153/266 (57%), Gaps = 1/266 (0%)
Query: 109 LSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTS 168
L +A +FD+ R+ S+ +++ +S+ + EA LF+ + R E + F++VL
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 169 CAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSC 228
A G+Q+H IK F + VG+SL+D Y K + R VF+ + ER+VV+
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 229 TAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLR 288
T +ISGYA+ +++E + LF ++Q EG N T+A+ L L+ G G QVH+ V++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 289 FEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVEL 348
+ + + NSLI++Y KCG++ +R +FD ++V++WN+M+ GY+ +G+ E + +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 349 FNLMREENKVKPDSVTYLAVLSGCSH 374
F MR N V+ ++ +V+ C++
Sbjct: 283 FYSMR-LNYVRLSESSFASVIKLCAN 307
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 164/300 (54%), Gaps = 10/300 (3%)
Query: 77 GQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQ 136
G +VH ++K + + LI Y KC + AR +FD+ ++VV+W +MIS Y+
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 137 KAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYV 196
EAL +F M + +E +FA+V+ CA +Q+H ++K F +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 197 GSSLLDMYAKAGRIHEARGVFE---CLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQV 253
++L+ Y+K + +A +F+ C+ +VVS TA+ISG+ Q EEA++LF +++
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVG--NVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 254 EGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTY 313
+G+ N TY+ +LTAL ++ +VH+ V++ + +L+D Y K G +
Sbjct: 391 KGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEE 446
Query: 314 SRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCS 373
+ +VF + ++ +++W+AML GY++ G +++F + + +KP+ T+ ++L+ C+
Sbjct: 447 AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCA 505
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 113/212 (53%), Gaps = 3/212 (1%)
Query: 207 AGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASV 266
+ R++ A +F+ P RD S +++ G+++ G +EA LF + GM + ++SV
Sbjct: 40 SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSV 99
Query: 267 LTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTV 326
L + L G+Q+H ++F V + SL+D Y K + R+VFD M ER V
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 327 ISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFH 386
++W ++ GY+++ M EV+ LF M+ E +P+S T+ A L + G+ RGL V H
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEG-TQPNSFTFAAALGVLAEEGVGGRGLQV-H 217
Query: 387 EIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEA 418
+V K+G + I ++++ + G V +A
Sbjct: 218 TVV-VKNGLDKTIPVSNSLINLYLKCGNVRKA 248
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/635 (37%), Positives = 373/635 (58%), Gaps = 11/635 (1%)
Query: 8 SRAFSSLTFTQQ---QLTVPSFPPNPQNLKTLCSNGQLTKALIEMATLGLEMRFEE---Y 61
S +F +TF +Q L P P ++ N AL+ + + L + +
Sbjct: 63 SSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTF 122
Query: 62 DTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFD--EM 119
LL AC L+ G+ VHA + + + V+++ LI Y KC L AR +F+ +
Sbjct: 123 PHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPL 182
Query: 120 RERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGK 179
ER +VSWTA++SAY+Q EAL +F +M + D +P+ +VL + + G+
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 180 QIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLG 239
IH+ ++K E + SL MYAK G++ A+ +F+ + +++ A+ISGYA+ G
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 240 LDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQN 299
EAI++F ++ + + + ++ S ++A + + +L + ++ +V R + V + +
Sbjct: 303 YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS 362
Query: 300 SLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVK 359
+LIDM++KCGS+ +R VFD +R V+ W+AM+VGY HG RE + L+ M E V
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGGVH 421
Query: 360 PDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEAL 419
P+ VT+L +L C+H GM G F+ + D K P+ +HY CV+D+LGRAG + +A
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNRMADHK--INPQQQHYACVIDLLGRAGHLDQAY 479
Query: 420 EFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAG 479
E IK MP +P + G+LL AC+ H +V++GE+ Q+L I+P N G+YV LSNLYA+A
Sbjct: 480 EVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAAR 539
Query: 480 RWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFK 539
W+ V VR MKEK + KD G SW+E+ L F D+SHP EE+ +V+ + + K
Sbjct: 540 LWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLK 599
Query: 540 EAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHN 599
E G+V + L+D+++E+ E+ L HSE++A+ +GLI TP+G P+R+ KNLR CV+CH
Sbjct: 600 EGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHA 659
Query: 600 FAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
K +SK+ R++ +RD NRFHH +G CSCGDYW
Sbjct: 660 ATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 209/368 (56%), Gaps = 9/368 (2%)
Query: 61 YDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMR 120
Y +L+++ ++ L+ ++HA ++ + +L T+LI + ++ AR++FD++
Sbjct: 24 YASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 121 ERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQ 180
+ W A+I YS+ H +AL ++ M + P+ FTF +L +C+G ++G+
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRF 140
Query: 181 IHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFEC--LPERDVVSCTAIISGYAQL 238
+H+ + + F++ ++V + L+ +YAK R+ AR VFE LPER +VS TAI+S YAQ
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN 200
Query: 239 GLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQ 298
G EA+E+F +++ + ++V SVL A + L L G+ +H+ V++ + L
Sbjct: 201 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 299 NSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKV 358
SL MY+KCG + ++ +FD M +I WNAM+ GY+K+G RE +++F+ M ++ V
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-V 319
Query: 359 KPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRV-GE 417
+PD+++ + +S C+ G ++ +++ + + + ++ ++DM + G V G
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYV--GRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 418 ALEFIKNM 425
L F + +
Sbjct: 378 RLVFDRTL 385
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/587 (39%), Positives = 358/587 (60%), Gaps = 9/587 (1%)
Query: 55 EMRFEE-------YDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCE 107
+M+ EE Y ++L C+ L G+++H+ +IKT ++ Y+ + LI Y K
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 539
Query: 108 CLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLT 167
L A + ++VVSWT MI+ Y+Q +AL F +ML +E ++
Sbjct: 540 KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVS 599
Query: 168 SCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVS 227
+CAG + G+QIH+ S F S + ++L+ +Y++ G+I E+ FE D ++
Sbjct: 600 ACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA 659
Query: 228 CTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVL 287
A++SG+ Q G +EEA+ +F ++ EG+ +N T+ S + A S A + GKQVH+ +
Sbjct: 660 WNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT 719
Query: 288 RFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVE 347
+ S + N+LI MY+KCGS++ + + F +S + +SWNA++ YSKHG G E ++
Sbjct: 720 KTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALD 779
Query: 348 LFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVD 407
F+ M N V+P+ VT + VLS CSH G+ D+G+A F E ++ + G P+ EHY CVVD
Sbjct: 780 SFDQMIHSN-VRPNHVTLVGVLSACSHIGLVDKGIAYF-ESMNSEYGLSPKPEHYVCVVD 837
Query: 408 MLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGN 467
ML RAG + A EFI+ MP +P A + +LL AC VH N++IGEF L+E+EPE++
Sbjct: 838 MLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSAT 897
Query: 468 YVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREEL 527
YV+LSNLYA + +W+ R+ MKEK V K+PG+SWIE+ +H+F+ D++HP+ +E+
Sbjct: 898 YVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEI 957
Query: 528 SAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRV 587
+ L+ + E GYV D +L ++ EQK+ ++ HSEKLA++FGL+ P PI V
Sbjct: 958 HEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINV 1017
Query: 588 IKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
+KNLR+C DCH + KFVSKV R++ +RD RFHH G CSC DYW
Sbjct: 1018 MKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 194/383 (50%), Gaps = 4/383 (1%)
Query: 37 CSNGQLTKALIEMATL-GLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYL 95
C G+ L + L GLE +L+ AC TL GQ++HA+ K + +
Sbjct: 367 CGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKI 426
Query: 96 RTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDT 155
L+ Y KC + A F E NVV W M+ AY + +F +M +
Sbjct: 427 EGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEI 486
Query: 156 EPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARG 215
PN++T+ ++L +C ELG+QIHS IIK+NF+ + YV S L+DMYAK G++ A
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWD 546
Query: 216 VFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAA 275
+ +DVVS T +I+GY Q D++A+ FR++ G+ S+ V + ++A +GL A
Sbjct: 547 ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 606
Query: 276 LGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVG 335
L G+Q+H+ S + QN+L+ +YS+CG + S F+ I+WNA++ G
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSG 666
Query: 336 YSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGF 395
+ + G E + +F M E + ++ T+ + + S +G V H ++ K G+
Sbjct: 667 FQQSGNNEEALRVFVRMNREG-IDNNNFTFGSAVKAASETANMKQGKQV-HAVI-TKTGY 723
Query: 396 EPEIEHYGCVVDMLGRAGRVGEA 418
+ E E ++ M + G + +A
Sbjct: 724 DSETEVCNALISMYAKCGSISDA 746
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 193/371 (52%), Gaps = 5/371 (1%)
Query: 53 GLEMRFEEYDTLLNACVNQR-TLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSD 111
G+ + LL C+ +L G+++H+ ++K L +L FY L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 112 ARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSC-A 170
A K+FDEM ER + +W MI + + E LF+RM+ + PNE TF+ VL +C
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 171 GAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTA 230
G+ F++ +QIH+ I+ V + L+D+Y++ G + AR VF+ L +D S A
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 231 IISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFE 290
+ISG ++ + EAI LF + V G++ ++SVL+A + +L G+Q+H VL+
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 291 IPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFN 350
S + N+L+ +Y G+L + +F NMS+R +++N ++ G S+ G G + +ELF
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 351 LMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLG 410
M + ++PDS T +++ CS G RG + K GF + G ++++
Sbjct: 379 RMHLDG-LEPDSNTLASLVVACSADGTLFRGQQL--HAYTTKLGFASNNKIEGALLNLYA 435
Query: 411 RAGRVGEALEF 421
+ + AL++
Sbjct: 436 KCADIETALDY 446
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 203/416 (48%), Gaps = 18/416 (4%)
Query: 40 GQLTKALIEMATLGLEMRFEEYDTLLNACVNQRTLRGG-------QRVHAHMIKTCYRPP 92
G++ + M + + + +L AC RGG +++HA ++ R
Sbjct: 168 GEVFGLFVRMVSENVTPNEGTFSGVLEAC------RGGSVAFDVVEQIHARILYQGLRDS 221
Query: 93 VYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLR 152
+ LI Y++ + AR++FD +R ++ SW AMIS S+ EA+ LF M
Sbjct: 222 TVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYV 281
Query: 153 SDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHE 212
P + F++VL++C E+G+Q+H L++K F S YV ++L+ +Y G +
Sbjct: 282 LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS 341
Query: 213 ARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSG 272
A +F + +RD V+ +I+G +Q G E+A+ELF+++ ++G+ + T AS++ A S
Sbjct: 342 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA 401
Query: 273 LAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAM 332
L G+Q+H++ + S ++ +L+++Y+KC + + F V+ WN M
Sbjct: 402 DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 461
Query: 333 LVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCK 392
LV Y R +F M+ E ++ P+ TY ++L C G + G + +I+ K
Sbjct: 462 LVAYGLLDDLRNSFRIFRQMQIE-EIVPNQYTYPSILKTCIRLGDLELGEQIHSQII--K 518
Query: 393 DGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVD 448
F+ ++DM + G++ A + + + F + + + A YN D
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMIAGYTQYNFD 572
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 186/387 (48%), Gaps = 12/387 (3%)
Query: 48 EMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCE 107
+M LG+ + ++L+AC +L G+++H ++K + Y+ L+ Y
Sbjct: 278 DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG 337
Query: 108 CLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLT 167
L A +F M +R+ V++ +I+ SQ + +A+ LF RM EP+ T A+++
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 168 SCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVS 227
+C+ G+Q+H+ K F S+ + +LL++YAK I A F +VV
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 457
Query: 228 CTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVL 287
++ Y L + +FR++Q+E ++ N TY S+L L L G+Q+HS ++
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 288 R--FEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREV 345
+ F++ +YV + LIDMY+K G L + + + + V+SW M+ GY+++ +
Sbjct: 518 KTNFQLNAYVC--SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 346 VELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCV 405
+ F M + ++ D V +S C+ G + + C GF ++ +
Sbjct: 576 LTTFRQMLDRG-IRSDEVGLTNAVSACAGLQALKEGQQIHAQA--CVSGFSSDLPFQNAL 632
Query: 406 VDMLGRAGRVGEALEFIKNMPFEPTAA 432
V + R G++ E+ + FE T A
Sbjct: 633 VTLYSRCGKIEESY-----LAFEQTEA 654
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 13/191 (6%)
Query: 38 SNGQLTKALIEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRT 97
+N + + + M G++ + + + A ++ G++VHA + KT Y +
Sbjct: 672 NNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 731
Query: 98 RLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEP 157
LI Y KC +SDA K F E+ +N VSW A+I+AYS+ EAL+ F +M+ S+ P
Sbjct: 732 ALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 791
Query: 158 NEFTFATVLTSCA-------GAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRI 210
N T VL++C+ G FE + L K E ++ V +DM +AG +
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP--EHYVCV----VDMLTRAGLL 845
Query: 211 HEARGVFECLP 221
A+ + +P
Sbjct: 846 SRAKEFIQEMP 856
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/571 (40%), Positives = 363/571 (63%), Gaps = 2/571 (0%)
Query: 64 LLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERN 123
+L C + + H +I+ V L LI Y+KC + AR++FD M ER+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 124 VVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHS 183
+VSW MI Y++ EAL++F+ M + +EFT ++VL++C K++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 184 LIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEE 243
L +K+ + ++YVG++LLD+YAK G I +A VFE + ++ V+ +++++GY Q EE
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 244 AIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLID 303
A+ L+R+ Q + N T +SV+ A S LAAL GKQ+H+ + + S V + +S +D
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 304 MYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSV 363
MY+KCGSL S +F + E+ + WN ++ G++KH +EV+ LF M+++ + P+ V
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG-MHPNEV 365
Query: 364 TYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIK 423
T+ ++LS C H G+ + G F +++ G P + HY C+VD+LGRAG + EA E IK
Sbjct: 366 TFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Query: 424 NMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWED 483
++PF+PTA+I GSLL +CRV+ N+++ E ++L E+EPENAGN+V+LSN+YA+ +WE+
Sbjct: 425 SIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEE 484
Query: 484 VTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGY 543
+ + R+L+++ V K G+SWI++ +HTF + HP E+ + + L +KF++ GY
Sbjct: 485 IAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGY 544
Query: 544 VPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKF 603
P + L+DV+ +KE++L+ HSEKLAL FGL+ PE +P+R++KNLRICVDCH F K
Sbjct: 545 KPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKA 604
Query: 604 VSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
S R + +RD NRFHH +G CSCGD+W
Sbjct: 605 ASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 14/227 (6%)
Query: 52 LGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSD 111
+ LE +++ AC N L G+++HA + K+ + V++ + + Y KC L +
Sbjct: 257 MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRE 316
Query: 112 ARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAG 171
+ +F E++E+N+ W +IS +++ A E + LF +M + PNE TF+++L+ C
Sbjct: 317 SYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 376
Query: 172 AFGFELGKQIHSLIIKS-NFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTA 230
E G++ L+ + ++ S ++D+ +AG + EA + + +P TA
Sbjct: 377 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP----FDPTA 432
Query: 231 IISG--------YAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTA 269
I G Y L L E A E +L+ E N+V +++ A
Sbjct: 433 SIWGSLLASCRVYKNLELAEVAAEKLFELEPENA-GNHVLLSNIYAA 478
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/588 (38%), Positives = 352/588 (59%), Gaps = 32/588 (5%)
Query: 77 GQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVV----------- 125
G+++H +IK + + + + L+ Y C+SDA+K+F + +RN V
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 126 -------------------SWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVL 166
SW AMI +Q + EA+ F M + +++ F +VL
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 167 TSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVV 226
+C G GKQIH+ II++NF+ HIYVGS+L+DMY K +H A+ VF+ + +++VV
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 227 SCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHV 286
S TA++ GY Q G EEA+++F +Q G+ ++ T ++A + +++L G Q H
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 287 LRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVV 346
+ + YV + NSL+ +Y KCG + S R+F+ M+ R +SW AM+ Y++ G E +
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 457
Query: 347 ELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVV 406
+LF+ M + +KPD VT V+S CS G+ ++G F +++ + G P I HY C++
Sbjct: 458 QLFDKMVQHG-LKPDGVTLTGVISACSRAGLVEKGQRYF-KLMTSEYGIVPSIGHYSCMI 515
Query: 407 DMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAG 466
D+ R+GR+ EA+ FI MPF P A +LL ACR N++IG++ + L+E++P +
Sbjct: 516 DLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPA 575
Query: 467 NYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREE 526
Y +LS++YAS G+W+ V ++R M+EK V K+PG+SWI+ LH+F A D S P ++
Sbjct: 576 GYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQ 635
Query: 527 LSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIR 586
+ AK+++L+ K + GY PD S V +DV+E K K+L HSE+LA+ FGLI P G PIR
Sbjct: 636 IYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIR 695
Query: 587 VIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
V KNLR+CVDCHN K +S V GR++ +RD RFH +GTCSCGD+W
Sbjct: 696 VGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 164/306 (53%), Gaps = 5/306 (1%)
Query: 33 LKTLCSNGQLTKAL---IEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCY 89
+K L NG +A+ EM GL+M + ++L AC + G+++HA +I+T +
Sbjct: 242 IKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF 301
Query: 90 RPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIR 149
+ +Y+ + LI Y KC+CL A+ +FD M+++NVVSWTAM+ Y Q + EA+ +F+
Sbjct: 302 QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLD 361
Query: 150 MLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGR 209
M RS +P+ +T +++CA E G Q H I S ++ V +SL+ +Y K G
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 210 IHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTA 269
I ++ +F + RD VS TA++S YAQ G E I+LF K+ G+ + VT V++A
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA 481
Query: 270 LSGLAALGHGKQVHSHVL-RFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMS-ERTVI 327
S + G++ + + I + + +ID++S+ G L + R + M I
Sbjct: 482 CSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAI 541
Query: 328 SWNAML 333
W +L
Sbjct: 542 GWTTLL 547
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 155/372 (41%), Gaps = 78/372 (20%)
Query: 179 KQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVF--------------------- 217
K IH II++ ++ ++++ YA AR VF
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 218 ----------ECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVL 267
E LP+RD V+ +I GY+ GL A++ + + + S +T +++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD--FSANLTRVTLM 143
Query: 268 TALSGLAALGH---GKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSER 324
T L ++ GH GKQ+H V++ SY+++ + L+ MY+ G ++ +++VF + +R
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 325 TVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAV 384
+ +N+++ G GM + ++LF M + DSV++ A++ G + G+ +
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEK------DSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 385 FHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVH 444
F E+ G + + +G V+ G G + E G + AC +
Sbjct: 258 FREMK--VQGLKMDQYPFGSVLPACGGLGAINE-----------------GKQIHACIIR 298
Query: 445 YNVDIGEFVGQRLME-----------------IEPENAGNYVILSNLYASAGRWEDVTRV 487
N +VG L++ ++ +N ++ + Y GR E+ ++
Sbjct: 299 TNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKI 358
Query: 488 RELMKEKAVTKD 499
M+ + D
Sbjct: 359 FLDMQRSGIDPD 370
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 256 MISNYVTYASVLTALSGLAALGHG---KQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLT 312
M SNY Y+ + GL A K +H +++R L N+++ Y+ S T
Sbjct: 1 MASNY--YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSST 58
Query: 313 YSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGC 372
Y+RRVFD + + + SWN +L+ YSK G+ E+ F + + D VT+ ++ G
Sbjct: 59 YARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR-----DGVTWNVLIEGY 113
Query: 373 SHGGMEDRGLAVFHEIV 389
S G+ + ++ ++
Sbjct: 114 SLSGLVGAAVKAYNTMM 130
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/597 (39%), Positives = 360/597 (60%), Gaps = 14/597 (2%)
Query: 49 MATLGLEM-----------RFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRT 97
MA + LEM F ++L A R + G+ +H + +++ + V + T
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 275
Query: 98 RLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEP 157
L+ Y KC L AR++FD M ERNVVSW +MI AY Q + EA+ +F +ML +P
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 158 NEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVF 217
+ + L +CA E G+ IH L ++ + ++ V +SL+ MY K + A +F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 218 ECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALG 277
L R +VS A+I G+AQ G +A+ F +++ + + TY SV+TA++ L+
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 278 HGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYS 337
H K +H V+R + V + +L+DMY+KCG++ +R +FD MSER V +WNAM+ GY
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 338 KHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEP 397
HG G+ +ELF M ++ +KP+ VT+L+V+S CSH G+ + GL F+ + + E
Sbjct: 516 THGFGKAALELFEEM-QKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKE-NYSIEL 573
Query: 398 EIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRL 457
++HYG +VD+LGRAGR+ EA +FI MP +P + G++LGAC++H NV+ E +RL
Sbjct: 574 SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERL 633
Query: 458 MEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHAS 517
E+ P++ G +V+L+N+Y +A WE V +VR M + + K PG S +E+ +H+F +
Sbjct: 634 FELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSG 693
Query: 518 DRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLI 577
+HP +++ A +++L KEAGYVPD + VL V+ + KE++L HSEKLA++FGL+
Sbjct: 694 STAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLL 752
Query: 578 GTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
T G I V KNLR+C DCHN K++S V GR++ +RD RFHH G CSCGDYW
Sbjct: 753 NTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 192/360 (53%), Gaps = 13/360 (3%)
Query: 22 TVPSFPPNPQNLKTLCSNGQLTKALIEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVH 81
TVP P P + S A + L LL C + + LR ++
Sbjct: 10 TVPQIPNPPSRHRHFLSERNYIPANVYEHPAAL---------LLERCSSLKELR---QIL 57
Query: 82 AHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSF 141
+ K + +T+L+ + + + +A ++F+ + + V + M+ +++ +
Sbjct: 58 PLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLD 117
Query: 142 EALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLL 201
+AL F+RM D EP + F +L C +GK+IH L++KS F ++ + L
Sbjct: 118 KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 202 DMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYV 261
+MYAK +++EAR VF+ +PERD+VS I++GY+Q G+ A+E+ + + E + +++
Sbjct: 178 NMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI 237
Query: 262 TYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNM 321
T SVL A+S L + GK++H + +R S V + +L+DMY+KCGSL +R++FD M
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 322 SERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRG 381
ER V+SWN+M+ Y ++ +E + +F M +E VKP V+ + L C+ G +RG
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG-VKPTDVSVMGALHACADLGDLERG 356
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/557 (40%), Positives = 341/557 (61%), Gaps = 3/557 (0%)
Query: 78 QRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQK 137
++VH H IK ++ T LI Y++ C+ +A +F E ++V+W AM++ Y+Q
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQS 495
Query: 138 AHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVG 197
+ L LF M + ++FT ATV +C F GKQ+H+ IKS ++ ++V
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 198 SSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMI 257
S +LDMY K G + A+ F+ +P D V+ T +ISG + G +E A +F ++++ G++
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 258 SNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRV 317
+ T A++ A S L AL G+Q+H++ L+ + + SL+DMY+KCGS+ + +
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 318 FDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGM 377
F + + +WNAMLVG ++HG G+E ++LF M+ +KPD VT++ VLS CSH G+
Sbjct: 676 FKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG-IKPDKVTFIGVLSACSHSGL 734
Query: 378 EDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSL 437
+ G +PEIEHY C+ D LGRAG V +A I++M E +A++ +L
Sbjct: 735 VSEAYKHMRSM-HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTL 793
Query: 438 LGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVT 497
L ACRV + + G+ V +L+E+EP ++ YV+LSN+YA+A +W+++ R +MK V
Sbjct: 794 LAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVK 853
Query: 498 KDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEE 557
KDPG SWIE+ +H F DRS+ E + KVK + K+ GYVP+ L DV+EE
Sbjct: 854 KDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEE 913
Query: 558 QKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDK 617
+KE+ L HSEKLA+ FGL+ TP PIRVIKNLR+C DCHN K+++KVY R++ LRD
Sbjct: 914 EKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDA 973
Query: 618 NRFHHIVEGTCSCGDYW 634
NRFH +G CSCGDYW
Sbjct: 974 NRFHRFKDGICSCGDYW 990
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 195/401 (48%), Gaps = 9/401 (2%)
Query: 42 LTKALIEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIV 101
L K +M +E + +L V +L GQ+VH +K + + LI
Sbjct: 299 LLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLIN 358
Query: 102 FYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFT 161
Y K AR +FD M ER+++SW ++I+ +Q EA+ LF+++LR +P+++T
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 162 FATVLTSCAG-AFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECL 220
+VL + + G L KQ+H IK N S +V ++L+D Y++ + EA +FE
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-R 477
Query: 221 PERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGK 280
D+V+ A+++GY Q + ++LF + +G S+ T A+V L A+ GK
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 281 QVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHG 340
QVH++ ++ + + + ++DMY KCG ++ ++ FD++ ++W M+ G ++G
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597
Query: 341 MGREVVELFNLMREENKVKPD--SVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPE 398
+F+ MR V PD ++ LA S C + R + ++C + +P
Sbjct: 598 EEERAFHVFSQMRLMG-VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN--DPF 654
Query: 399 IEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLG 439
+ +VDM + G + +A K + A L+G
Sbjct: 655 VG--TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVG 693
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 165/346 (47%), Gaps = 28/346 (8%)
Query: 131 ISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNF 190
+S Y L F M+ SD E ++ TF +L + LG+Q+H + +K
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 191 ESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRK 250
+ + V +SL++MY K + AR VF+ + ERD++S ++I+G AQ GL+ EA+ LF +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 251 LQVEGMISNYVTYASVLTALSGLA-ALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYS--- 306
L G+ + T SVL A S L L KQVH H ++ S + +LID YS
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 307 --KCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVT 364
K + + R FD +++WNAM+ GY++ G + ++LF LM ++ + + D T
Sbjct: 467 CMKEAEILFERHNFD------LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE-RSDDFT 519
Query: 365 YLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKN 424
V C ++G V + K G++ ++ ++DM + G + A +
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAI--KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 577
Query: 425 MPFEPTAAILGSLLGACRVHYNVDIGE-------FVGQRLMEIEPE 463
+P P +++ C ++ GE F RLM + P+
Sbjct: 578 IPV-PDDVAWTTMISGC-----IENGEEERAFHVFSQMRLMGVLPD 617
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 144/265 (54%), Gaps = 9/265 (3%)
Query: 63 TLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRER 122
T+ C + G++VHA+ IK+ Y +++ + ++ Y KC +S A+ FD +
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 123 NVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIH 182
+ V+WT MIS + A ++F +M P+EFT AT+ + + E G+QIH
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH 641
Query: 183 SLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDE 242
+ +K N + +VG+SL+DMYAK G I +A +F+ + ++ + A++ G AQ G +
Sbjct: 642 ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGK 701
Query: 243 EAIELFRKLQVEGMISNYVTYASVLTAL--SGLA--ALGHGKQVH-SHVLRFEIPSYVVL 297
E ++LF++++ G+ + VT+ VL+A SGL A H + +H + ++ EI Y L
Sbjct: 702 ETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCL 761
Query: 298 QNSLIDMYSKCGSLTYSRRVFDNMS 322
++L + G + + + ++MS
Sbjct: 762 ADAL----GRAGLVKQAENLIESMS 782
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 170/381 (44%), Gaps = 56/381 (14%)
Query: 64 LLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERN 123
L + L G+ HA ++ P +L LI Y+KC L+ AR++FD+M +R+
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 124 VVSWTAMISAYSQKAH----SFEALNLFIRMLRSDT-EPNEFTFATVLTSCAGAFGFELG 178
+VSW ++++AY+Q + + + L R+LR D + T + +L C +
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 179 KQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQL 238
+ H K + +V +L+++Y K G++ E + +FE +P RDVV ++ Y ++
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 239 GLDEEAIELFRKLQVEGMISNYVTYASVLTALSG-------LAALGHGKQVHSHVLRFEI 291
G EEAI+L G+ N +T +L +SG + + +G S
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITL-RLLARISGDDSDAGQVKSFANGNDASS------- 276
Query: 292 PSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSER--------------TVISWNAMLVGYS 337
S ++ +N + Y G + + F +M E T + +++ +G
Sbjct: 277 VSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQ 336
Query: 338 KHGMG------------REVVELFNLMRE--------ENKVKPDSVTYLAVLSGCSHGGM 377
H M ++ ++ +R+ +N + D +++ +V++G + G+
Sbjct: 337 VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGL 396
Query: 378 EDRGLAVFHEIVDCKDGFEPE 398
E + +F +++ C G +P+
Sbjct: 397 EVEAVCLFMQLLRC--GLKPD 415
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 279 GKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSK 338
GK H+ +L FE L N+LI MYSKCGSLTY+RRVFD M +R ++SWN++L Y++
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 339 HGMG-----REVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKD 393
++ LF ++R++ V +T +L C H G FH CK
Sbjct: 118 SSECVVENIQQAFLLFRILRQD-VVYTSRMTLSPMLKLCLHSGYV-WASESFHGYA-CKI 174
Query: 394 GFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPF 427
G + + G +V++ + G+V E + MP+
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY 208
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/625 (38%), Positives = 376/625 (60%), Gaps = 37/625 (5%)
Query: 44 KALIEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFY 103
K + M +LGL + +L +C + + GQ++H H++K +Y+ T LI Y
Sbjct: 120 KLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMY 179
Query: 104 NKCECLSDA-------------------------------RKMFDEMRERNVVSWTAMIS 132
+ L DA +K+FDE+ ++VVSW AMIS
Sbjct: 180 VQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMIS 239
Query: 133 AYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFES 192
Y++ + EAL LF M++++ P+E T TV+++CA + ELG+Q+H I F S
Sbjct: 240 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS 299
Query: 193 HIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQ 252
++ + ++L+D+Y+K G + A G+FE LP +DV+S +I GY + L +EA+ LF+++
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359
Query: 253 VEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRF--EIPSYVVLQNSLIDMYSKCGS 310
G N VT S+L A + L A+ G+ +H ++ + + + L+ SLIDMY+KCG
Sbjct: 360 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 419
Query: 311 LTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLS 370
+ + +VF+++ +++ SWNAM+ G++ HG +LF+ MR+ ++PD +T++ +LS
Sbjct: 420 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG-IQPDDITFVGLLS 478
Query: 371 GCSHGGMEDRGLAVFHEIV-DCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEP 429
CSH GM D G +F + D K P++EHYGC++D+LG +G EA E I M EP
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQDYK--MTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEP 536
Query: 430 TAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRE 489
I SLL AC++H NV++GE + L++IEPEN G+YV+LSN+YASAGRW +V + R
Sbjct: 537 DGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRA 596
Query: 490 LMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSC 549
L+ +K + K PG S IE+D ++H F D+ HP E+ ++++ V ++AG+VPD S
Sbjct: 597 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE 656
Query: 550 VLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYG 609
VL +++EE KE L HSEKLA+ FGLI T G + ++KNLR+C +CH K +SK+Y
Sbjct: 657 VLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYK 716
Query: 610 RKVSLRDKNRFHHIVEGTCSCGDYW 634
R++ RD+ RFHH +G CSC DYW
Sbjct: 717 REIIARDRTRFHHFRDGVCSCNDYW 741
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 213/439 (48%), Gaps = 43/439 (9%)
Query: 63 TLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVF---YNKCECLSDARKMFDEM 119
+LL+ C +TL+ + +HA MIK Y ++LI F E L A +F +
Sbjct: 38 SLLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 120 RERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGK 179
+E N++ W M ++ + AL L++ M+ PN +TF VL SCA + F+ G+
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 180 QIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLG 239
QIH ++K + +YV +SL+ MY + GR+ +A VF+ P RDVVS TA+I GYA G
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 240 LDEEAIELFRKLQVE------GMISNYV-------------------------TYASVLT 268
E A +LF ++ V+ MIS Y T +V++
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 269 ALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVIS 328
A + ++ G+QVH + S + + N+LID+YSKCG L + +F+ + + VIS
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 329 WNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEI 388
WN ++ GY+ + +E + LF M + P+ VT L++L C+H G D G + H
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWI-HVY 392
Query: 389 VDCK-DGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNV 447
+D + G ++DM + G + EA + N + + +++ +H
Sbjct: 393 IDKRLKGVTNASSLRTSLIDMYAKCGDI-EAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 451
Query: 448 D--IGEFVGQRLMEIEPEN 464
D F R + I+P++
Sbjct: 452 DASFDLFSRMRKIGIQPDD 470
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/602 (38%), Positives = 363/602 (60%), Gaps = 8/602 (1%)
Query: 38 SNGQLTKAL---IEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVY 94
SNG K L ++M G+E+ ++ C + R + G+ VH+ +K C+
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 95 LRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSD 154
L+ Y+KC L A+ +F EM +R+VVS+T+MI+ Y+++ + EA+ LF M
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 155 TEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEAR 214
P+ +T VL CA + GK++H I +++ I+V ++L+DMYAK G + EA
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 215 GVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMIS-NYVTYASVLTALSGL 273
VF + +D++S II GY++ EA+ LF L E S + T A VL A + L
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 274 AALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAML 333
+A G+++H +++R S + NSL+DMY+KCG+L + +FD+++ + ++SW M+
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 334 VGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIV-DCK 392
GY HG G+E + LFN MR+ ++ D ++++++L CSH G+ D G F+ + +CK
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAG-IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 631
Query: 393 DGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEF 452
EP +EHY C+VDML R G + +A FI+NMP P A I G+LL CR+H++V + E
Sbjct: 632 --IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEK 689
Query: 453 VGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILH 512
V +++ E+EPEN G YV+++N+YA A +WE V R+R+ + ++ + K+PG SWIE+ ++
Sbjct: 690 VAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 749
Query: 513 TFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLAL 572
F A D S+P E + A ++++ + E GY P L D +E +KE+ L GHSEKLA+
Sbjct: 750 IFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAM 809
Query: 573 TFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGD 632
G+I + G IRV KNLR+C DCH AKF+SK+ R++ LRD NRFH +G CSC
Sbjct: 810 ALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRG 869
Query: 633 YW 634
+W
Sbjct: 870 FW 871
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 216/385 (56%), Gaps = 7/385 (1%)
Query: 48 EMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCE 107
+M + G+EM + + + + R++ GG+++H ++K+ + + L+ FY K +
Sbjct: 185 KMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQ 244
Query: 108 CLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLT 167
+ ARK+FDEM ER+V+SW ++I+ Y + + L++F++ML S E + T +V
Sbjct: 245 RVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFA 304
Query: 168 SCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVS 227
CA + LG+ +HS+ +K+ F ++LLDMY+K G + A+ VF + +R VVS
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS 364
Query: 228 CTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVL 287
T++I+GYA+ GL EA++LF +++ EG+ + T +VL + L GK+VH +
Sbjct: 365 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 424
Query: 288 RFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVE 347
++ + + N+L+DMY+KCGS+ + VF M + +ISWN ++ GYSK+ E +
Sbjct: 425 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 484
Query: 348 LFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVD 407
LFNL+ EE + PD T VL C+ D+G + I+ ++G+ + +VD
Sbjct: 485 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM--RNGYFSDRHVANSLVD 542
Query: 408 MLGRAGRVGEALEFIKNMPFEPTAA 432
M + G + + +M F+ A+
Sbjct: 543 MYAKCGAL-----LLAHMLFDDIAS 562
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 204/392 (52%), Gaps = 5/392 (1%)
Query: 28 PNPQNLKTLCSNGQLTKALIEMATLG-LEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIK 86
N Q L+ C +G L A+ + G ++ ++L C + ++L+ G+ V +
Sbjct: 64 ANTQ-LRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 87 TCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNL 146
+ L ++L + Y C L +A ++FDE++ + W +++ ++ ++ L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 147 FIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAK 206
F +M+ S E + +TF+ V S + G+Q+H I+KS F VG+SL+ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 207 AGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASV 266
R+ AR VF+ + ERDV+S +II+GY GL E+ + +F ++ V G+ + T SV
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 267 LTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTV 326
+ + G+ VHS ++ N+L+DMYSKCG L ++ VF MS+R+V
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 362
Query: 327 ISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFH 386
+S+ +M+ GY++ G+ E V+LF M EE + PD T AVL+ C+ + D G V
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEG-ISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 387 EIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEA 418
I + GF+ + + ++DM + G + EA
Sbjct: 422 WIKENDLGFDIFVSN--ALMDMYAKCGSMQEA 451
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/582 (40%), Positives = 346/582 (59%), Gaps = 20/582 (3%)
Query: 63 TLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRER 122
+LL+AC G +H++ IK +++ +LI Y + L D +K+FD M R
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 123 NVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTF---ATVLT------SCAGAF 173
+++SW ++I AY A++LF M S +P+ T A++L+ +C
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 371
Query: 174 GFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIIS 233
GF L K F I +G++++ MYAK G + AR VF LP DV+S IIS
Sbjct: 372 GFTLRK--------GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIIS 423
Query: 234 GYAQLGLDEEAIELFRKLQVEGMIS-NYVTYASVLTALSGLAALGHGKQVHSHVLRFEIP 292
GYAQ G EAIE++ ++ EG I+ N T+ SVL A S AL G ++H +L+ +
Sbjct: 424 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 483
Query: 293 SYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLM 352
V + SL DMY KCG L + +F + + WN ++ + HG G + V LF M
Sbjct: 484 LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 543
Query: 353 REENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRA 412
+E VKPD +T++ +LS CSH G+ D G F E++ G P ++HYGC+VDM GRA
Sbjct: 544 LDEG-VKPDHITFVTLLSACSHSGLVDEGQWCF-EMMQTDYGITPSLKHYGCMVDMYGRA 601
Query: 413 GRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILS 472
G++ AL+FIK+M +P A+I G+LL ACRVH NVD+G+ + L E+EPE+ G +V+LS
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 661
Query: 473 NLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVK 532
N+YASAG+WE V +R + K + K PG S +E+D + F+ +++HPM EE+ ++
Sbjct: 662 NMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELT 721
Query: 533 QLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLR 592
L K K GYVPD VL DV++++KE +L+ HSE+LA+ F LI TP IR+ KNLR
Sbjct: 722 ALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLR 781
Query: 593 ICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
+C DCH+ KF+SK+ R++ +RD NRFHH G CSCGDYW
Sbjct: 782 VCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 206/379 (54%), Gaps = 10/379 (2%)
Query: 49 MATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCEC 108
M + GL + + ++L AC RT+ G ++H +K + VY+ LI Y++ +
Sbjct: 144 MLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 109 LSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTS 168
+ +AR +FDEM R++ SW AMIS Y Q ++ EAL L + D+ T ++L++
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDS----VTVVSLLSA 256
Query: 169 CAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSC 228
C A F G IHS IK ES ++V + L+D+YA+ GR+ + + VF+ + RD++S
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316
Query: 229 TAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLR 288
+II Y AI LF+++++ + + +T S+ + LS L + + V LR
Sbjct: 317 NSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR 376
Query: 289 -FEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVE 347
+ + N+++ MY+K G + +R VF+ + VISWN ++ GY+++G E +E
Sbjct: 377 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE 436
Query: 348 LFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVD 407
++N+M EE ++ + T+++VL CS G +G+ + ++ K+G ++ + D
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL--KNGLYLDVFVVTSLAD 494
Query: 408 MLGRAGRVGEALEFIKNMP 426
M G+ GR+ +AL +P
Sbjct: 495 MYGKCGRLEDALSLFYQIP 513
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 184/369 (49%), Gaps = 13/369 (3%)
Query: 59 EEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDE 118
++ TL C N L+ + +HA ++ + V + +L+ Y ++ AR FD
Sbjct: 55 DDVHTLFRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDH 111
Query: 119 MRERNVVSWTAMISAYSQKAHSFEALNLF-IRMLRSDTEPNEFTFATVLTSCAGAFGFEL 177
++ R+V +W MIS Y + +S E + F + ML S P+ TF +VL +C
Sbjct: 112 IQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID--- 168
Query: 178 GKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQ 237
G +IH L +K F +YV +SL+ +Y++ + AR +F+ +P RD+ S A+ISGY Q
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 238 LGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVL 297
G +EA+ L L+ + VT S+L+A + G +HS+ ++ + S + +
Sbjct: 229 SGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 298 QNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENK 357
N LID+Y++ G L ++VFD M R +ISWN+++ Y + + LF MR ++
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR-LSR 343
Query: 358 VKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGE 417
++PD +T +++ S S G + R K F +I VV M + G V
Sbjct: 344 IQPDCLTLISLASILSQLG-DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402
Query: 418 ALEFIKNMP 426
A +P
Sbjct: 403 ARAVFNWLP 411
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 276 LGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVG 335
L K +H+ ++ + V + L+++Y G++ +R FD++ R V +WN M+ G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 336 YSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSH--GGMEDRGLAVFHEIVDCKD 393
Y + G EV+ F+L + + PD T+ +VL C G + LA+ K
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLAL-------KF 179
Query: 394 GFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACR 442
GF ++ ++ + R VG A MP + + G C+
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/664 (37%), Positives = 378/664 (56%), Gaps = 71/664 (10%)
Query: 40 GQLTKALIEMATL---GLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLR 96
GQ KA+ M + G+E +L + R + G++VH+ ++K R V +
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 97 TRLIVFYNKCECLSDARKMFD-------------------------------EMRERNVV 125
L+ Y KC A+ +FD +M ER++V
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 126 SWTAMISAYSQKAHSFEALNLFIRMLR-SDTEPNEFTFATVLTSCAGAFGFELGKQIHSL 184
+W +MIS ++Q+ + AL++F +MLR S P+ FT A+VL++CA +GKQIHS
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 185 IIKSNFE-SHIYVG--------------------------------SSLLDMYAKAGRIH 211
I+ + F+ S I + ++LLD Y K G ++
Sbjct: 305 IVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMN 364
Query: 212 EARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALS 271
+A+ +F L +RDVV+ TA+I GY Q G EAI LFR + G N T A++L+ S
Sbjct: 365 QAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVAS 424
Query: 272 GLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMS-ERTVISWN 330
LA+L HGKQ+H ++ V + N+LI MY+K G++T + R FD + ER +SW
Sbjct: 425 SLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWT 484
Query: 331 AMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVD 390
+M++ ++HG E +ELF M E ++PD +TY+ V S C+H G+ ++G F + D
Sbjct: 485 SMIIALAQHGHAEEALELFETMLMEG-LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Query: 391 CKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIG 450
D P + HY C+VD+ GRAG + EA EFI+ MP EP GSLL ACRVH N+D+G
Sbjct: 544 V-DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLG 602
Query: 451 EFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQI 510
+ +RL+ +EPEN+G Y L+NLY++ G+WE+ ++R+ MK+ V K+ G SWIE+
Sbjct: 603 KVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHK 662
Query: 511 LHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKL 570
+H F D +HP + E+ +K++ + K+ GYVPD + VL+D++EE KE++L HSEKL
Sbjct: 663 VHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKL 722
Query: 571 ALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSC 630
A+ FGLI TP+ +R++KNLR+C DCH KF+SK+ GR++ +RD RFHH +G CSC
Sbjct: 723 AIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSC 782
Query: 631 GDYW 634
DYW
Sbjct: 783 RDYW 786
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 202/466 (43%), Gaps = 104/466 (22%)
Query: 52 LGLEMRFEEYDTLLNACVNQRTLR-GGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLS 110
L L E LL VN+ R Q VH +IK+ VYL L+ Y+K
Sbjct: 7 LSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYAL 66
Query: 111 DARKMFDEMR-------------------------------ERNVVSWTAMISAYSQKAH 139
ARK+FDEM +R+ VSWT MI Y
Sbjct: 67 HARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQ 126
Query: 140 SFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSS 199
+A+ + M++ EP +FT VL S A E GK++HS I+K ++ V +S
Sbjct: 127 YHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNS 186
Query: 200 LLDMYAK-------------------------------AGRIHEARGVFECLPERDVVSC 228
LL+MYAK G++ A FE + ERD+V+
Sbjct: 187 LLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTW 246
Query: 229 TAIISGYAQLGLDEEAIELFRKLQVEGMIS-NYVTYASVLTALSGLAALGHGKQVHSHVL 287
++ISG+ Q G D A+++F K+ + ++S + T ASVL+A + L L GKQ+HSH++
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIV 306
Query: 288 R--FEIPSYVVLQNSLIDMYSKCGSLTYSRR----------------------------- 316
F+I V+ N+LI MYS+CG + +RR
Sbjct: 307 TTGFDISGIVL--NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMN 364
Query: 317 ----VFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGC 372
+F ++ +R V++W AM+VGY +HG E + LF M + +P+S T A+LS
Sbjct: 365 QAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAMLSVA 423
Query: 373 SHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEA 418
S G + V + + + + ++ M +AG + A
Sbjct: 424 SSLASLSHGKQIHGSAVKSGEIYSVSVSN--ALITMYAKAGNITSA 467
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 168/402 (41%), Gaps = 83/402 (20%)
Query: 157 PNEFTFATVLTSCAGAFGFELGKQ--------IHSLIIKSNFESHIYVGSSLLDMYAKAG 208
P + +T+L C + K +H +IKS +Y+ ++L+++Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 209 RIHEARGVFE--------------------------C-----LPERDVVSCTAIISGYAQ 237
AR +F+ C LP+RD VS T +I GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 238 LGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVL 297
+G +AI + + EG+ T +VL +++ + GK+VHS +++ + V +
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 298 QNSLIDMYSKCGSLTYSRRVFD-------------------------------NMSERTV 326
NSL++MY+KCG ++ VFD M+ER +
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 327 ISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFH 386
++WN+M+ G+++ G +++F+ M ++ + PD T +VLS C++ G +
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 387 EIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFI-----KNMPFEPTAAI------LG 435
IV GF+ ++ M R G V A I K++ E A+ LG
Sbjct: 304 HIVTT--GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 361
Query: 436 SLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYAS 477
+ A + ++ + V M + E G+Y NL+ S
Sbjct: 362 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRS 403
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/536 (41%), Positives = 342/536 (63%), Gaps = 10/536 (1%)
Query: 99 LIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPN 158
+I Y + + +AR++FDE ++V +WTAM+S Y Q EA LF +M E N
Sbjct: 256 IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERN 311
Query: 159 EFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFE 218
E ++ +L E+ K++ ++ N + ++++ YA+ G+I EA+ +F+
Sbjct: 312 EVSWNAMLAGYVQGERMEMAKELFDVMPCRN----VSTWNTMITGYAQCGKISEAKNLFD 367
Query: 219 CLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGH 278
+P+RD VS A+I+GY+Q G EA+ LF +++ EG N +++S L+ + + AL
Sbjct: 368 KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 427
Query: 279 GKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSK 338
GKQ+H +++ + + N+L+ MY KCGS+ + +F M+ + ++SWN M+ GYS+
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 487
Query: 339 HGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPE 398
HG G + F M+ E +KPD T +AVLS CSH G+ D+G F+ + G P
Sbjct: 488 HGFGEVALRFFESMKREG-LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ-DYGVMPN 545
Query: 399 IEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLM 458
+HY C+VD+LGRAG + +A +KNMPFEP AAI G+LLGA RVH N ++ E ++
Sbjct: 546 SQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 605
Query: 459 EIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASD 518
+EPEN+G YV+LSNLYAS+GRW DV ++R M++K V K PG SWIE+ HTF D
Sbjct: 606 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 665
Query: 519 RSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIG 578
HP ++E+ A +++L ++ K+AGYV S VL+DV+EE+KE+++ HSE+LA+ +G++
Sbjct: 666 EFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMR 725
Query: 579 TPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
G PIRVIKNLR+C DCHN K+++++ GR + LRD NRFHH +G+CSCGDYW
Sbjct: 726 VSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 42/382 (10%)
Query: 103 YNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTF 162
Y + C+ DAR +FD M E+N VSW A++SAY Q + EA LF + +
Sbjct: 167 YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF---------KSRENW 217
Query: 163 ATVLTSCAGAFGFELGKQIHSLIIKSNFES----HIYVGSSLLDMYAKAGRIHEARGVFE 218
A V +C GF K+I + + F+S + ++++ YA++G+I EAR +F+
Sbjct: 218 ALVSWNCLLG-GFVKKKKI--VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD 274
Query: 219 CLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGH 278
P +DV + TA++SGY Q + EEA ELF K+ N V++ ++ LA
Sbjct: 275 ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAM------LAGYVQ 324
Query: 279 GKQVHSHVLRFEIPS--YVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGY 336
G+++ F++ V N++I Y++CG ++ ++ +FD M +R +SW AM+ GY
Sbjct: 325 GERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY 384
Query: 337 SKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFE 396
S+ G E + LF M E + + ++ + LS C+ + G + +V K G+E
Sbjct: 385 SQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLV--KGGYE 441
Query: 397 PEIEHYGCVVD-----MLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYN-VDIG 450
GC V M + G + EA + K M + + + G R + V +
Sbjct: 442 T-----GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALR 496
Query: 451 EFVGQRLMEIEPENAGNYVILS 472
F + ++P++A +LS
Sbjct: 497 FFESMKREGLKPDDATMVAVLS 518
Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 138/316 (43%), Gaps = 72/316 (22%)
Query: 93 VYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTA----------------------- 129
V+ T ++ Y + + +AR++FD+M ERN VSW A
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPC 340
Query: 130 --------MISAYSQKAHSFEALNLF-------------------------------IRM 150
MI+ Y+Q EA NLF ++M
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 151 LRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRI 210
R N +F++ L++CA ELGKQ+H ++K +E+ +VG++LL MY K G I
Sbjct: 401 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 211 HEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTAL 270
EA +F+ + +D+VS +I+GY++ G E A+ F ++ EG+ + T +VL+A
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 271 SGLAALGHGKQVHSHVLRFEIPSYVVLQNS-----LIDMYSKCGSLTYSRRVFDNMS-ER 324
S + G+Q + + Y V+ NS ++D+ + G L + + NM E
Sbjct: 521 SHTGLVDKGRQYFYTMTQ----DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576
Query: 325 TVISWNAMLVGYSKHG 340
W +L HG
Sbjct: 577 DAAIWGTLLGASRVHG 592
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 143/315 (45%), Gaps = 58/315 (18%)
Query: 112 ARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAG 171
ARK+FDEM ER++VSW MI Y + + +A LF M D C+
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV-------------CSW 160
Query: 172 AFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAI 231
+++L YA+ G + +AR VF+ +PE++ VS A+
Sbjct: 161 --------------------------NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 232 ISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEI 291
+S Y Q EEA LF+ + ++S + +L + +Q + ++
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENWALVS----WNCLLGGFVKKKKIVEARQFFDSMNVRDV 250
Query: 292 PSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNL 351
S+ N++I Y++ G + +R++FD + V +W AM+ GY ++ M E ELF+
Sbjct: 251 VSW----NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDK 306
Query: 352 MREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGR 411
M E N+ V++ A+L+G G + +F +++ C++ + + ++ +
Sbjct: 307 MPERNE-----VSWNAMLAGYVQGERMEMAKELF-DVMPCRN-----VSTWNTMITGYAQ 355
Query: 412 AGRVGEALEFIKNMP 426
G++ EA MP
Sbjct: 356 CGKISEAKNLFDKMP 370
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Query: 44 KALIEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFY 103
+ ++M G + + + L+ C + L G+++H ++K Y ++ L++ Y
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 454
Query: 104 NKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFA 163
KC + +A +F EM +++VSW MI+ YS+ AL F M R +P++ T
Sbjct: 455 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 514
Query: 164 TVLTSCAGAFGFELGKQ-IHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLP 221
VL++C+ + G+Q +++ + + ++D+ +AG + +A + + +P
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 147/361 (40%), Gaps = 63/361 (17%)
Query: 191 ESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRK 250
+S I + + Y + GR +EA VF+ +P VS +ISGY + G EL RK
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNG----EFELARK 116
Query: 251 LQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGS 310
L E + V++ ++ LG +++ + ++ S+ N+++ Y++ G
Sbjct: 117 LFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSW----NTMLSGYAQNGC 172
Query: 311 LTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLS 370
+ +R VFD M E+ +SWNA+L Y ++ E LF EN + V
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK--SREN--------WALVSW 222
Query: 371 GCSHGGMEDRGLAVFHEIVDCKDGFEP----EIEHYGCVVDMLGRAGRVGEALEFIKNMP 426
C GG + +IV+ + F+ ++ + ++ ++G++ EA + P
Sbjct: 223 NCLLGGFVKK-----KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESP 277
Query: 427 ----FEPTAAILGSLLGAC---------------RVHYNVDIGEFVGQRLMEIEPE---- 463
F TA + G + V +N + +V ME+ E
Sbjct: 278 VQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDV 337
Query: 464 ----NAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIEL----DQILHTFH 515
N + + YA G+ ++ + L +K +DP SW + Q H+F
Sbjct: 338 MPCRNVSTWNTMITGYAQCGK---ISEAKNLF-DKMPKRDP-VSWAAMIAGYSQSGHSFE 392
Query: 516 A 516
A
Sbjct: 393 A 393
>sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protein At3g14330
OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2
Length = 710
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/581 (40%), Positives = 361/581 (62%), Gaps = 7/581 (1%)
Query: 59 EEYDTLLNACVNQRTLRGGQRVHAHMIKT-CYRPPVYLRTRLIVFYNKCECLSDARKMFD 117
E Y LL+AC++ ++L G ++ + ++ R L ++LI ++ C L ARK+FD
Sbjct: 132 EAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFD 191
Query: 118 EMRERNVVS---WTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFG 174
++ + ++++ W AM YS+ +AL +++ ML S EP F+ + L +C
Sbjct: 192 DVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKD 251
Query: 175 FELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISG 234
+G+ IH+ I+K + V + LL +Y ++G +AR VF+ + ER+VV+ ++IS
Sbjct: 252 LRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISV 311
Query: 235 YAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSY 294
++ E LFRK+Q E + ++ T ++L A S +AAL GK++H+ +L+ +
Sbjct: 312 LSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 371
Query: 295 VVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMRE 354
V L NSL+DMY KCG + YSRRVFD M + + SWN ML Y+ +G EV+ LF M E
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431
Query: 355 ENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGR 414
V PD +T++A+LSGCS G+ + GL++F E + + P +EHY C+VD+LGRAG+
Sbjct: 432 SG-VAPDGITFVALLSGCSDTGLTEYGLSLF-ERMKTEFRVSPALEHYACLVDILGRAGK 489
Query: 415 VGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNL 474
+ EA++ I+ MPF+P+A+I GSLL +CR+H NV +GE + L +EP N GNYV++SN+
Sbjct: 490 IKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNI 549
Query: 475 YASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKV-KQ 533
YA A W++V ++RE+MK++ V K+ G SW+++ + F A + KV +
Sbjct: 550 YADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTE 609
Query: 534 LSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRI 593
L +++GY P+ S VL+DVDEE K + GHSE+LA T+ LI T EG PIR+ KNLR+
Sbjct: 610 LQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRV 669
Query: 594 CVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
C DCH++ K VS+V R + LRD RFHH V+G CSC DYW
Sbjct: 670 CADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/626 (36%), Positives = 362/626 (57%), Gaps = 38/626 (6%)
Query: 45 ALIEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYN 104
+ +EM G + ++L +C LR G+ VH +++ +Y L+ Y
Sbjct: 92 SFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYA 151
Query: 105 KC-------------------------------ECL-----SDARKMFDEMRERNVVSWT 128
K C+ R++F+ M ++VVS+
Sbjct: 152 KLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYN 211
Query: 129 AMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKS 188
+I+ Y+Q +AL + M +D +P+ FT ++VL + GK+IH +I+
Sbjct: 212 TIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK 271
Query: 189 NFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELF 248
+S +Y+GSSL+DMYAK+ RI ++ VF L RD +S ++++GY Q G EA+ LF
Sbjct: 272 GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLF 331
Query: 249 RKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKC 308
R++ + V ++SV+ A + LA L GKQ+H +VLR S + + ++L+DMYSKC
Sbjct: 332 RQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC 391
Query: 309 GSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAV 368
G++ +R++FD M+ +SW A+++G++ HG G E V LF M+ + VKP+ V ++AV
Sbjct: 392 GNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG-VKPNQVAFVAV 450
Query: 369 LSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFE 428
L+ CSH G+ D F+ + G E+EHY V D+LGRAG++ EA FI M E
Sbjct: 451 LTACSHVGLVDEAWGYFNSMTKVY-GLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVE 509
Query: 429 PTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVR 488
PT ++ +LL +C VH N+++ E V +++ ++ EN G YV++ N+YAS GRW+++ ++R
Sbjct: 510 PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLR 569
Query: 489 ELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMS 548
M++K + K P SWIE+ H F + DRSHP ++++ +K + + ++ GYV D S
Sbjct: 570 LRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTS 629
Query: 549 CVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVY 608
VL+DVDEE K ++L GHSE+LA+ FG+I T G IRV KN+RIC DCH KF+SK+
Sbjct: 630 GVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKIT 689
Query: 609 GRKVSLRDKNRFHHIVEGTCSCGDYW 634
R++ +RD +RFHH G CSCGDYW
Sbjct: 690 EREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 196/417 (47%), Gaps = 46/417 (11%)
Query: 63 TLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIV-FYNKCECLSDARKMFDEMRE 121
TL+ ++ +++HA I+T + + +++ Y + L +A +F ++
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLLFKTLKS 67
Query: 122 RNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQI 181
V++W ++I ++ ++ +AL F+ M S P+ F +VL SC G+ +
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 182 HSLIIKSNFESHIYVGSSLLDMYAK-----------------------AGR--------- 209
H I++ + +Y G++L++MYAK +G
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187
Query: 210 ----IHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYAS 265
I R VFE +P +DVVS II+GYAQ G+ E+A+ + R++ + + T +S
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 247
Query: 266 VLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERT 325
VL S + GK++H +V+R I S V + +SL+DMY+K + S RVF + R
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 326 VISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVF 385
ISWN+++ GY ++G E + LF M KVKP +V + +V+ C+H G +
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTA-KVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 386 HEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNM----PFEPTAAILGSLL 438
++ + GF I +VDM + G + A + M TA I+G L
Sbjct: 367 GYVL--RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 101/185 (54%), Gaps = 16/185 (8%)
Query: 39 NGQLTKALI---EMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYL 95
NG+ +AL +M T ++ + +++ AC + TL G+++H ++++ + +++
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 96 RTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDT 155
+ L+ Y+KC + ARK+FD M + VSWTA+I ++ H EA++LF M R
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 156 EPNEFTFATVLTSCAG------AFG-FELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAG 208
+PN+ F VLT+C+ A+G F +++ L N E Y +++ D+ +AG
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL----NQELEHY--AAVADLLGRAG 494
Query: 209 RIHEA 213
++ EA
Sbjct: 495 KLEEA 499
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/700 (33%), Positives = 392/700 (56%), Gaps = 86/700 (12%)
Query: 16 FTQQQLTVPSFP-PNPQNLKTLCSNGQLTKALIEMATLGLEMRFEEYD---------TLL 65
F L + S P P + +L LTKA + ++G+ R + L
Sbjct: 66 FNDADLVLQSIPDPTIYSFSSLIY--ALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLF 123
Query: 66 NACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRER--- 122
C + G+++H + +++ + Y +C + DARK+FD M ++
Sbjct: 124 KVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVV 183
Query: 123 --------------------------------NVVSWTAMISAYSQKAHSFEALNLFIRM 150
N+VSW ++S +++ + EA+ +F ++
Sbjct: 184 TCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
Query: 151 LRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRI 210
P++ T ++VL S + +G+ IH +IK V S+++DMY K+G +
Sbjct: 244 HHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHV 303
Query: 211 H-------------------------------EARGVFECLPER----DVVSCTAIISGY 235
+ +A +FE E+ +VVS T+II+G
Sbjct: 304 YGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGC 363
Query: 236 AQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYV 295
AQ G D EA+ELFR++QV G+ N+VT S+L A +AALGHG+ H +R + V
Sbjct: 364 AQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV 423
Query: 296 VLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELF-NLMRE 354
+ ++LIDMY+KCG + S+ VF+ M + ++ WN+++ G+S HG +EV+ +F +LMR
Sbjct: 424 HVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR- 482
Query: 355 ENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGR 414
++KPD +++ ++LS C G+ D G F +++ + G +P +EHY C+V++LGRAG+
Sbjct: 483 -TRLKPDFISFTSLLSACGQVGLTDEGWKYF-KMMSEEYGIKPRLEHYSCMVNLLGRAGK 540
Query: 415 VGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNL 474
+ EA + IK MPFEP + + G+LL +CR+ NVD+ E ++L +EPEN G YV+LSN+
Sbjct: 541 LQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNI 600
Query: 475 YASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQL 534
YA+ G W +V +R M+ + K+PG SWI++ ++T A D+SHP ++++ K+ ++
Sbjct: 601 YAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEI 660
Query: 535 SVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRIC 594
S + +++G+ P++ L+DV+E+++E++L GHSEKLA+ FGL+ TP+G P++VIKNLRIC
Sbjct: 661 SKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRIC 720
Query: 595 VDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
DCH KF+S GR++ +RD NRFHH +G CSCGD+W
Sbjct: 721 GDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 169/345 (48%), Gaps = 36/345 (10%)
Query: 79 RVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKA 138
+ HA ++K+ + Y+ +LI Y+ C +DA + + + + S++++I A ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 139 HSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGS 198
+++ +F RM P+ + CA F++GKQIH + S + +V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 199 SLLDMYAKAGRIHEARGVFECLPERDVVSCTA---------------------------- 230
S+ MY + GR+ +AR VF+ + ++DVV+C+A
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 231 -------IISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVH 283
I+SG+ + G +EA+ +F+K+ G + VT +SVL ++ L G+ +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 284 SHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGR 343
+V++ + + +++IDMY K G + +F+ NA + G S++G+
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 344 EVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEI 388
+ +E+F L +E+ ++ + V++ ++++GC+ G + L +F E+
Sbjct: 336 KALEMFELFKEQT-MELNVVSWTSIIAGCAQNGKDIEALELFREM 379
Score = 33.1 bits (74), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 7/147 (4%)
Query: 281 QVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHG 340
Q H+ +L+ + + LI YS + V ++ + T+ S+++++ +K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 341 MGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEI--VDCKDGFEPE 398
+ + + +F+ M + PDS + C+ E V +I V C G + +
Sbjct: 96 LFTQSIGVFSRMFSHGLI-PDSHVLPNLFKVCA----ELSAFKVGKQIHCVSCVSGLDMD 150
Query: 399 IEHYGCVVDMLGRAGRVGEALEFIKNM 425
G + M R GR+G+A + M
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRM 177
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/633 (36%), Positives = 369/633 (58%), Gaps = 33/633 (5%)
Query: 33 LKTLCSNGQLTKALIEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRP- 91
+ TLCS G L +A + L + + + +C +++L G+++H ++ + +
Sbjct: 20 IATLCSKGNLREAF-QRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSD 78
Query: 92 ---------------------PVYLRTR---------LIVFYNKCECLSDARKMFDEMRE 121
VY R R LI Y + L +ARK+FDEM +
Sbjct: 79 KFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPD 138
Query: 122 RNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQI 181
R + +W AMI+ Q + E L+LF M P+E+T +V + AG +G+QI
Sbjct: 139 RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQI 198
Query: 182 HSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLD 241
H IK E + V SSL MY + G++ + V +P R++V+ +I G AQ G
Sbjct: 199 HGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCP 258
Query: 242 EEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSL 301
E + L++ +++ G N +T+ +VL++ S LA G G+Q+H+ ++ S V + +SL
Sbjct: 259 ETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSL 318
Query: 302 IDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPD 361
I MYSKCG L + + F + + W++M+ Y HG G E +ELFN M E+ ++ +
Sbjct: 319 ISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEIN 378
Query: 362 SVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEF 421
V +L +L CSH G++D+GL +F +V+ K GF+P ++HY CVVD+LGRAG + +A
Sbjct: 379 EVAFLNLLYACSHSGLKDKGLELFDMMVE-KYGFKPGLKHYTCVVDLLGRAGCLDQAEAI 437
Query: 422 IKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRW 481
I++MP + I +LL AC +H N ++ + V + +++I+P ++ YV+L+N++ASA RW
Sbjct: 438 IRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRW 497
Query: 482 EDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEA 541
DV+ VR+ M++K V K+ G SW E +H F DRS +E+ + +K+L+++ K
Sbjct: 498 RDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLK 557
Query: 542 GYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFA 601
GY PD + VL+D+DEE+KE L+ HSEKLA+ F L+ PEGAPIR+IKNLR+C DCH
Sbjct: 558 GYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAF 617
Query: 602 KFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
K++S + R+++LRD +RFHH + G CSCGDYW
Sbjct: 618 KYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/604 (38%), Positives = 365/604 (60%), Gaps = 35/604 (5%)
Query: 64 LLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERN 123
L+ A +L GQ +H +K+ V++ LI Y C L A K+F ++E++
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Query: 124 VVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHS 183
VVSW +MI+ + QK +AL LF +M D + + T VL++CA E G+Q+ S
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256
Query: 184 LIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECL----------------------- 220
I ++ ++ + +++LDMY K G I +A+ +F+ +
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 221 --------PERDVVSCTAIISGYAQLGLDEEAIELFRKLQVE-GMISNYVTYASVLTALS 271
P++D+V+ A+IS Y Q G EA+ +F +LQ++ M N +T S L+A +
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 272 GLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNA 331
+ AL G+ +HS++ + I + ++LI MYSKCG L SR VF+++ +R V W+A
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 436
Query: 332 MLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDC 391
M+ G + HG G E V++F M+E N VKP+ VT+ V CSH G+ D ++FH++ +
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQEAN-VKPNGVTFTNVFCACSHTGLVDEAESLFHQM-ES 494
Query: 392 KDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGE 451
G PE +HY C+VD+LGR+G + +A++FI+ MP P+ ++ G+LLGAC++H N+++ E
Sbjct: 495 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 554
Query: 452 FVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQIL 511
RL+E+EP N G +V+LSN+YA G+WE+V+ +R+ M+ + K+PG S IE+D ++
Sbjct: 555 MACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMI 614
Query: 512 HTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQ-KEKVLLGHSEKL 570
H F + D +HPM E++ K+ ++ K K GY P++S VL ++EE+ KE+ L HSEKL
Sbjct: 615 HEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKL 674
Query: 571 ALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSC 630
A+ +GLI T IRVIKNLR+C DCH+ AK +S++Y R++ +RD+ RFHH G CSC
Sbjct: 675 AICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSC 734
Query: 631 GDYW 634
D+W
Sbjct: 735 NDFW 738
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 195/375 (52%), Gaps = 28/375 (7%)
Query: 17 TQQQLTVPSFPPNPQNLKTLCSNGQLTKALIEMATLGLEMRFEEYDTLLNACVNQRTLRG 76
T Q L++P P N N +N + ++ + +L+ CV+ R L+
Sbjct: 6 TAQPLSLPRHP-NFSNPNQPTTNNERSRHI----------------SLIERCVSLRQLK- 47
Query: 77 GQRVHAHMIKTCYRPPVYLRTRLIVF--YNKCECLSDARKMFDEMRERNVVSWTAMISAY 134
+ H HMI+T Y ++L + L ARK+FDE+ + N +W +I AY
Sbjct: 48 --QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAY 105
Query: 135 SQKAHSFEALNLFIRML-RSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESH 193
+ ++ F+ M+ S PN++TF ++ + A LG+ +H + +KS S
Sbjct: 106 ASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSD 165
Query: 194 IYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQV 253
++V +SL+ Y G + A VF + E+DVVS ++I+G+ Q G ++A+ELF+K++
Sbjct: 166 VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES 225
Query: 254 EGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTY 313
E + +++VT VL+A + + L G+QV S++ + + L N+++DMY+KCGS+
Sbjct: 226 EDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIED 285
Query: 314 SRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCS 373
++R+FD M E+ ++W ML GY+ E+ N M ++ D V + A++S
Sbjct: 286 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK-----DIVAWNALISAYE 340
Query: 374 HGGMEDRGLAVFHEI 388
G + L VFHE+
Sbjct: 341 QNGKPNEALIVFHEL 355
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/575 (38%), Positives = 350/575 (60%), Gaps = 3/575 (0%)
Query: 61 YDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMR 120
+ +L A V GQ++HA + T + + +++ FY+K + + + R +FDEM
Sbjct: 253 FSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
Query: 121 ERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQ 180
E + VS+ +IS+YSQ +L+ F M + F FAT+L+ A ++G+Q
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ 372
Query: 181 IHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 240
+H + + +S ++VG+SL+DMYAK EA +F+ LP+R VS TA+ISGY Q GL
Sbjct: 373 LHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGL 432
Query: 241 DEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNS 300
++LF K++ + ++ T+A+VL A + A+L GKQ+H+ ++R V +
Sbjct: 433 HGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG 492
Query: 301 LIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKP 360
L+DMY+KCGS+ + +VF+ M +R +SWNA++ ++ +G G + F M E ++P
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG-LQP 551
Query: 361 DSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALE 420
DSV+ L VL+ CSH G ++G F + G P+ +HY C++D+LGR GR EA +
Sbjct: 552 DSVSILGVLTACSHCGFVEQGTEYFQAMSPIY-GITPKKKHYACMLDLLGRNGRFAEAEK 610
Query: 421 FIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEP-ENAGNYVILSNLYASAG 479
+ MPFEP + S+L ACR+H N + E ++L +E +A YV +SN+YA+AG
Sbjct: 611 LMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAG 670
Query: 480 RWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFK 539
WE V V++ M+E+ + K P SW+E++ +H F ++D++HP +E+ K+ +L+ + +
Sbjct: 671 EWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIE 730
Query: 540 EAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHN 599
GY PD S V+ DVDE+ K + L HSE+LA+ F LI TPEG PI V+KNLR C DCH
Sbjct: 731 REGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHA 790
Query: 600 FAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
K +SK+ R++++RD +RFHH EG CSCGDYW
Sbjct: 791 AIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 195/368 (52%), Gaps = 5/368 (1%)
Query: 61 YDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCEC--LSDARKMFDE 118
+ TLL C + +VHA +K + +L ++ + CE L A +F+E
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 119 MRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELG 178
+ E++ V++ +I+ Y + E+++LF++M +S +P++FTF+ VL + G F LG
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 179 KQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQL 238
+Q+H+L + + F VG+ +LD Y+K R+ E R +F+ +PE D VS +IS Y+Q
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 239 GLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQ 298
E ++ FR++Q G +A++L+ + L++L G+Q+H L S + +
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 299 NSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKV 358
NSL+DMY+KC + +F ++ +RT +SW A++ GY + G+ ++LF MR N +
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN-L 448
Query: 359 KPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEA 418
+ D T+ VL + G + I+ + G + +VDM + G + +A
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFII--RSGNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 419 LEFIKNMP 426
++ + MP
Sbjct: 507 VQVFEEMP 514
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 10/292 (3%)
Query: 48 EMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCE 107
EM +G + R + T+L+ N +L+ G+++H + +++ L+ Y KCE
Sbjct: 341 EMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCE 400
Query: 108 CLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLT 167
+A +F + +R VSWTA+IS Y QK L LF +M S+ ++ TFATVL
Sbjct: 401 MFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLK 460
Query: 168 SCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVS 227
+ A LGKQ+H+ II+S +++ GS L+DMYAK G I +A VFE +P+R+ VS
Sbjct: 461 ASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 520
Query: 228 CTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVL 287
A+IS +A G E AI F K+ G+ + V+ VLTA S + G + +
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAM- 579
Query: 288 RFEIPSYVVLQNS-----LIDMYSKCGSLTYSRRVFDNMS-ERTVISWNAML 333
P Y + ++D+ + G + ++ D M E I W+++L
Sbjct: 580 ---SPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 133/249 (53%), Gaps = 4/249 (1%)
Query: 109 LSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSD--TEPNEFTFATVL 166
+S AR +FD M +R VV+WT ++ Y++ +H EA LF +M RS T P+ TF T+L
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 167 TSCAGAFGFELGKQIHSLIIKSNFESHIY--VGSSLLDMYAKAGRIHEARGVFECLPERD 224
C A Q+H+ +K F+++ + V + LL Y + R+ A +FE +PE+D
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 225 VVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHS 284
V+ +I+GY + GL E+I LF K++ G + T++ VL A+ GL G+Q+H+
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 285 HVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGRE 344
+ + N ++D YSK + +R +FD M E +S+N ++ YS+
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 345 VVELFNLMR 353
+ F M+
Sbjct: 335 SLHFFREMQ 343
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 110/233 (47%), Gaps = 7/233 (3%)
Query: 198 SSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKL--QVEG 255
++++ + K G + AR +F+ +P+R VV+ T ++ YA+ +EA +LFR++
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 256 MISNYVTYASVLTALSGLAALGHGKQVHSHVLR--FEIPSYVVLQNSLIDMYSKCGSLTY 313
+ ++VT+ ++L + QVH+ ++ F+ ++ + N L+ Y + L
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 314 SRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCS 373
+ +F+ + E+ +++N ++ GY K G+ E + LF MR+ +P T+ VL
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGH-QPSDFTFSGVLKAVV 261
Query: 374 HGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMP 426
G+ D L + GF + ++D + RV E MP
Sbjct: 262 --GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 124/269 (46%), Gaps = 17/269 (6%)
Query: 16 FTQQQLTVPSFPPNPQNLKTLCSNGQLTKAL--------IEMATLGLEMRFEEYDTLLNA 67
F + +L S P T +G + K L +M L + T+L A
Sbjct: 402 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461
Query: 68 CVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSW 127
+ +L G+++HA +I++ V+ + L+ Y KC + DA ++F+EM +RN VSW
Sbjct: 462 SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 521
Query: 128 TAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGK---QIHSL 184
A+ISA++ A+ F +M+ S +P+ + VLT+C+ E G Q S
Sbjct: 522 NALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSP 581
Query: 185 IIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLP-ERDVVSCTAIISG---YAQLGL 240
I + Y + +LD+ + GR EA + + +P E D + +++++ + L
Sbjct: 582 IYGITPKKKHY--ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSL 639
Query: 241 DEEAIELFRKLQVEGMISNYVTYASVLTA 269
E A E ++ + YV+ +++ A
Sbjct: 640 AERAAEKLFSMEKLRDAAAYVSMSNIYAA 668
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 290 EIP-SYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVEL 348
E+P V N++I + K G ++ +R +FD M +RTV++W ++ Y+++ E +L
Sbjct: 73 EMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKL 132
Query: 349 FNLM-REENKVKPDSVTYLAVLSGCS 373
F M R + PD VT+ +L GC+
Sbjct: 133 FRQMCRSSSCTLPDHVTFTTLLPGCN 158
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/617 (39%), Positives = 359/617 (58%), Gaps = 54/617 (8%)
Query: 70 NQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCEC----LSDARKMFDEMRERNVV 125
N RT+R ++HA IK+ ++ F + L A K+F++M +RN
Sbjct: 32 NCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCF 91
Query: 126 SWTAMISAYSQ--KAHSFEALNLFIRMLRSD-TEPNEFTFATVLTSCAGAFGFELGKQIH 182
SW +I +S+ + + A+ LF M+ + EPN FTF +VL +CA + GKQIH
Sbjct: 92 SWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 183 SLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVF------------------------- 217
L +K F +V S+L+ MY G + +AR +F
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 218 -----------EC---------LPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMI 257
+C + +R VVS +ISGY+ G ++A+E+FR+++ +
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 258 SNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRV 317
NYVT SVL A+S L +L G+ +H + I VL ++LIDMYSKCG + + V
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 318 FDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGM 377
F+ + VI+W+AM+ G++ HG + ++ F MR+ V+P V Y+ +L+ CSHGG+
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG-VRPSDVAYINLLTACSHGGL 390
Query: 378 EDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSL 437
+ G F ++V DG EP IEHYGC+VD+LGR+G + EA EFI NMP +P I +L
Sbjct: 391 VEEGRRYFSQMVSV-DGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Query: 438 LGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVT 497
LGACR+ NV++G+ V LM++ P ++G YV LSN+YAS G W +V+ +R MKEK +
Sbjct: 450 LGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIR 509
Query: 498 KDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEE 557
KDPG S I++D +LH F D SHP +E+++ + ++S K + AGY P + VL +++EE
Sbjct: 510 KDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEE 569
Query: 558 QKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDK 617
KE VL HSEK+A FGLI T G PIR++KNLRIC DCH+ K +SKVY RK+++RD+
Sbjct: 570 DKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDR 629
Query: 618 NRFHHIVEGTCSCGDYW 634
RFHH +G+CSC DYW
Sbjct: 630 KRFHHFQDGSCSCMDYW 646
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 171/383 (44%), Gaps = 64/383 (16%)
Query: 44 KALIEMATLGLEMRFEEY--------DTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYL 95
KALI + TL EM +E+ ++L AC ++ G+++H +K + ++
Sbjct: 107 KALIAI-TLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFV 165
Query: 96 RTRLIVFYNKCECLSD-------------------------------------------- 111
+ L+ Y C + D
Sbjct: 166 MSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCK 225
Query: 112 -ARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCA 170
AR +FD+MR+R+VVSW MIS YS +A+ +F M + D PN T +VL + +
Sbjct: 226 AARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAIS 285
Query: 171 GAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTA 230
ELG+ +H S +GS+L+DMY+K G I +A VFE LP +V++ +A
Sbjct: 286 RLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSA 345
Query: 231 IISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFE 290
+I+G+A G +AI+ F K++ G+ + V Y ++LTA S + G++ S ++ +
Sbjct: 346 MINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVD 405
Query: 291 -IPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSER-TVISWNAMLVGYSKHG---MGREV 345
+ + ++D+ + G L + NM + + W A+L G MG+ V
Sbjct: 406 GLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRV 465
Query: 346 VELFNLMREENKVKPDSVTYLAV 368
+ M V DS Y+A+
Sbjct: 466 ANILMDM-----VPHDSGAYVAL 483
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/606 (38%), Positives = 347/606 (57%), Gaps = 34/606 (5%)
Query: 61 YDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARK------ 114
Y L+ C R L G++VH H+ + + P + + RL+ Y KC L DARK
Sbjct: 88 YCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMP 147
Query: 115 -------------------------MFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIR 149
+FDEM E++ SWTAM++ Y +K EAL L+
Sbjct: 148 NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSL 207
Query: 150 MLR-SDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAG 208
M R ++ PN FT + + + A GK+IH I+++ +S + SSL+DMY K G
Sbjct: 208 MQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG 267
Query: 209 RIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLT 268
I EAR +F+ + E+DVVS T++I Y + E LF +L N T+A VL
Sbjct: 268 CIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLN 327
Query: 269 ALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVIS 328
A + L GKQVH ++ R Y +SL+DMY+KCG++ ++ V D + ++S
Sbjct: 328 ACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVS 387
Query: 329 WNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEI 388
W +++ G +++G E ++ F+L+ + KPD VT++ VLS C+H G+ ++GL F+ I
Sbjct: 388 WTSLIGGCAQNGQPDEALKYFDLLLKSG-TKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446
Query: 389 VDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVD 448
+ K +HY C+VD+L R+GR + I MP +P+ + S+LG C + N+D
Sbjct: 447 TE-KHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNID 505
Query: 449 IGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELD 508
+ E Q L +IEPEN YV ++N+YA+AG+WE+ ++R+ M+E VTK PG SW E+
Sbjct: 506 LAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIK 565
Query: 509 QILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSE 568
+ H F A+D SHPM ++ +++L K KE GYVP S VL+DV++EQKE+ L+ HSE
Sbjct: 566 RKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSE 625
Query: 569 KLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTC 628
KLA+ F ++ T EG I+V KNLR CVDCH KF+S + RK+++RD RFH G C
Sbjct: 626 KLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQC 685
Query: 629 SCGDYW 634
SCGDYW
Sbjct: 686 SCGDYW 691
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 161/326 (49%), Gaps = 36/326 (11%)
Query: 148 IRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKA 207
+++L +P T+ ++ C+ E GK++H I S F I + + LL MYAK
Sbjct: 74 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 208 GRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVE------GMISNYV 261
G + +AR VF+ +P RD+ S +++GYA++GL EEA +LF ++ + M++ YV
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYV 193
Query: 262 TY-----ASVLTAL---------------------SGLAALGHGKQVHSHVLRFEIPSYV 295
A VL +L + + + GK++H H++R + S
Sbjct: 194 KKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDE 253
Query: 296 VLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREE 355
VL +SL+DMY KCG + +R +FD + E+ V+SW +M+ Y K RE LF+ +
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 356 NKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRV 415
+ +P+ T+ VL+ C+ E+ G V + + GF+P +VDM + G +
Sbjct: 314 CE-RPNEYTFAGVLNACADLTTEELGKQVHGYMT--RVGFDPYSFASSSLVDMYTKCGNI 370
Query: 416 GEALEFIKNMPFEPTAAILGSLLGAC 441
A + P +P SL+G C
Sbjct: 371 ESAKHVVDGCP-KPDLVSWTSLIGGC 395
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/598 (37%), Positives = 359/598 (60%), Gaps = 13/598 (2%)
Query: 46 LIEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNK 105
++M G E ++ +AC L G+++H+ I++ V L+ Y K
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAK 314
Query: 106 CEC---LSDARKMFDEMRERNVVSWTAMISAYSQKAH-SFEALNLFIRML-RSDTEPNEF 160
C + D RK+FD M + +V+SWTA+I+ Y + + + EA+NLF M+ + EPN F
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374
Query: 161 TFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECL 220
TF++ +C +GKQ+ K S+ V +S++ M+ K+ R+ +A+ FE L
Sbjct: 375 TFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
Query: 221 PERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGK 280
E+++VS + G + E+A +L ++ + + T+AS+L+ ++ + ++ G+
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Query: 281 QVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHG 340
Q+HS V++ + + N+LI MYSKCGS+ + RVF+ M R VISW +M+ G++KHG
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 341 MGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIE 400
V+E FN M EE VKP+ VTY+A+LS CSH G+ G F+ + + +P++E
Sbjct: 555 FAIRVLETFNQMIEEG-VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE-DHKIKPKME 612
Query: 401 HYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEI 460
HY C+VD+L RAG + +A EFI MPF+ + + LGACRVH N ++G+ ++++E+
Sbjct: 613 HYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEL 672
Query: 461 EPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRS 520
+P Y+ LSN+YA AG+WE+ T +R MKE+ + K+ G SWIE+ +H F+ D +
Sbjct: 673 DPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTA 732
Query: 521 HPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDV----DEEQKEKVLLGHSEKLALTFGL 576
HP ++ ++ +L + K GYVPD VL+ + DE +KE++L HSEK+A+ FGL
Sbjct: 733 HPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGL 792
Query: 577 IGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
I T + P+RV KNLR+C DCHN K++S V GR++ LRD NRFHH +G CSC DYW
Sbjct: 793 ISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 208/408 (50%), Gaps = 14/408 (3%)
Query: 45 ALIEMATLGLE-MRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFY 103
AL MA G+ M + +LL +C+ R R G+ VHA +I+ P L LI Y
Sbjct: 48 ALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLY 107
Query: 104 NKCECLSDARKMFDEMR---ERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEF 160
+K + A +F+ MR +R+VVSW+AM++ Y +A+ +F+ L PN++
Sbjct: 108 SKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDY 167
Query: 161 TFATVLTSCAGAFGFELGKQIHSLIIKS-NFESHIYVGSSLLDMYAKAGRIHE-ARGVFE 218
+ V+ +C+ + +G+ ++K+ +FES + VG SL+DM+ K E A VF+
Sbjct: 168 CYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFD 227
Query: 219 CLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGH 278
+ E +VV+ T +I+ Q+G EAI F + + G S+ T +SV +A + L L
Sbjct: 228 KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSL 287
Query: 279 GKQVHSHVLRFEIPSYVVLQNSLIDMYSKC---GSLTYSRRVFDNMSERTVISWNAMLVG 335
GKQ+HS +R + V + SL+DMY+KC GS+ R+VFD M + +V+SW A++ G
Sbjct: 288 GKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 336 YSKH-GMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDG 394
Y K+ + E + LF+ M + V+P+ T+ + C + G V + K G
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF--KRG 403
Query: 395 FEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACR 442
V+ M ++ R+ +A +++ + + L G CR
Sbjct: 404 LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 212/439 (48%), Gaps = 17/439 (3%)
Query: 44 KALIEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTC-YRPPVYLRTRLIVF 102
K +E LGL Y ++ AC N + G+ ++KT + V + LI
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 103 YNKCE-CLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFT 161
+ K E +A K+FD+M E NVV+WT MI+ Q EA+ F+ M+ S E ++FT
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 162 FATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKA---GRIHEARGVFE 218
++V ++CA LGKQ+HS I+S V SL+DMYAK G + + R VF+
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFD 329
Query: 219 CLPERDVVSCTAIISGYAQ-LGLDEEAIELFRKLQVEGMIS-NYVTYASVLTALSGLAAL 276
+ + V+S TA+I+GY + L EAI LF ++ +G + N+ T++S A L+
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 277 GHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGY 336
GKQV + + S + NS+I M+ K + ++R F+++SE+ ++S+N L G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 337 SKHGMGREVVELFNLMRE--ENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDG 394
++ + F L+ E E ++ + T+ ++LSG ++ G +G + ++V K G
Sbjct: 450 CRN---LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV--KLG 504
Query: 395 FEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVG 454
++ M + G + A M + + G + + + + E
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 455 QRLME-IEPENAGNYVILS 472
Q + E ++P ILS
Sbjct: 565 QMIEEGVKPNEVTYVAILS 583
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 346/572 (60%), Gaps = 7/572 (1%)
Query: 64 LLNACVNQRTLRGGQRVHAHMIKT-CYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRER 122
+L A + LR G ++H+ KT CY Y+ T I Y+KC + +F E R+
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHD-YVLTGFISLYSKCGKIKMGSALFREFRKP 285
Query: 123 NVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIH 182
++V++ AMI Y+ + +L+LF ++ S T + L +G L IH
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVS-LVPVSGHL--MLIYAIH 342
Query: 183 SLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDE 242
+KSNF SH V ++L +Y+K I AR +F+ PE+ + S A+ISGY Q GL E
Sbjct: 343 GYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTE 402
Query: 243 EAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLI 302
+AI LFR++Q N VT +L+A + L AL GK VH V + S + + +LI
Sbjct: 403 DAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALI 462
Query: 303 DMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDS 362
MY+KCGS+ +RR+FD M+++ ++WN M+ GY HG G+E + +F M + P
Sbjct: 463 GMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG-ITPTP 521
Query: 363 VTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFI 422
VT+L VL CSH G+ G +F+ ++ + GFEP ++HY C+VD+LGRAG + AL+FI
Sbjct: 522 VTFLCVLYACSHAGLVKEGDEIFNSMIH-RYGFEPSVKHYACMVDILGRAGHLQRALQFI 580
Query: 423 KNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWE 482
+ M EP +++ +LLGACR+H + ++ V ++L E++P+N G +V+LSN++++ +
Sbjct: 581 EAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYP 640
Query: 483 DVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAG 542
VR+ K++ + K PG + IE+ + H F + D+SHP +E+ K+++L K +EAG
Sbjct: 641 QAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAG 700
Query: 543 YVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAK 602
Y P+ L+DV+EE++E ++ HSE+LA+ FGLI T G IR+IKNLR+C+DCH K
Sbjct: 701 YQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTK 760
Query: 603 FVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
+SK+ R + +RD NRFHH +G CSCGDYW
Sbjct: 761 LISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 207/448 (46%), Gaps = 33/448 (7%)
Query: 79 RVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKA 138
+ HA +I +R + L T+L + + AR +F ++ +V + ++ +S
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 139 HSFEALNLFIRMLRS-DTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVG 197
+L++F + +S D +PN T+A +++ +G G+ IH + +S + +G
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 198 SSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMI 257
S+++ MY K R+ +AR VF+ +PE+D + +ISGY + + E+I++FR L E
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 258 S-NYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRR 316
+ T +L A++ L L G Q+HS + S+ + I +YSKCG +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 317 VFDNMSERTVISWNAMLVGYSKHGMGREVVELFN-LMREENKVKPDSVTYLAVLSG---- 371
+F + ++++NAM+ GY+ +G + LF LM +++ ++ L +SG
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 372 -------------CSHGGMEDRGLAVF---HEIVDCKDGFE--PE--IEHYGCVVDMLGR 411
SH + V+ +EI + F+ PE + + ++ +
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 412 AGRVGEALEFIKNMP---FEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNY 468
G +A+ + M F P + +L AC + +G++V + + E++ Y
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS-IY 456
Query: 469 V--ILSNLYASAGRWEDVTRVRELMKEK 494
V L +YA G + R+ +LM +K
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKK 484
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 275 ALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLV 334
++ H Q H+ ++ + + L L S G++ Y+R +F ++ V +N ++
Sbjct: 32 SISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 335 GYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDG 394
G+S + + +F +R+ +KP+S TY +S S G +DR V H DG
Sbjct: 92 GFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS-GFRDDRAGRVIHGQA-VVDG 149
Query: 395 FEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPT 430
+ E+ +V M + RV +A + MP + T
Sbjct: 150 CDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/575 (38%), Positives = 348/575 (60%), Gaps = 3/575 (0%)
Query: 61 YDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMR 120
+DT L A + + VH ++KTCY + L+ Y + +SDA K+F+EM
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
Query: 121 ERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQ 180
+ +VV W+ MI+ + Q EA++LFIRM + PNEFT +++L CA LG+Q
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Query: 181 IHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 240
+H L++K F+ IYV ++L+D+YAK ++ A +F L ++ VS +I GY LG
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429
Query: 241 DEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNS 300
+A +FR+ + VT++S L A + LA++ G QVH ++ V + NS
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS 489
Query: 301 LIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKP 360
LIDMY+KCG + +++ VF+ M V SWNA++ GYS HG+GR+ + + ++M++ + KP
Sbjct: 490 LIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD-CKP 548
Query: 361 DSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALE 420
+ +T+L VLSGCS+ G+ D+G F ++ G EP +EHY C+V +LGR+G++ +A++
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQECFESMIR-DHGIEPCLEHYTCMVRLLGRSGQLDKAMK 607
Query: 421 FIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGR 480
I+ +P+EP+ I ++L A N + + +++I P++ YV++SN+YA A +
Sbjct: 608 LIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQ 667
Query: 481 WEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKE 540
W +V +R+ MKE V K+PG SWIE +H F HP + ++ ++ L++K
Sbjct: 668 WANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATR 727
Query: 541 AGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAP-IRVIKNLRICVDCHN 599
AGYVPD + VL D+D+E+K+K L HSE+LAL +GL+ P I ++KNLRIC DCH+
Sbjct: 728 AGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHS 787
Query: 600 FAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
K +S + R + +RD NRFHH G CSCGD+W
Sbjct: 788 AMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 175/348 (50%), Gaps = 7/348 (2%)
Query: 80 VHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAH 139
+H+ ++K Y ++ LI Y+ C + AR +F+ + +++V W ++S Y + +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 140 SFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSS 199
++L L M + PN +TF T L + G F+ K +H I+K+ + VG
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 200 LLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISN 259
LL +Y + G + +A VF +P+ DVV + +I+ + Q G EA++LF +++ ++ N
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 260 YVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFD 319
T +S+L + G G+Q+H V++ + + N+LID+Y+KC + + ++F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 320 NMSERTVISWNAMLVGYSKHGMGREVVELFNLMRE--ENKVKPDSVTYLAVLSGCSHGGM 377
+S + +SWN ++VGY G G + F++ RE N+V VT+ + L C+
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKA---FSMFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 378 EDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNM 425
D G+ V + + + + + ++DM + G + A M
Sbjct: 465 MDLGVQVHGLAIKTNNAKKVAVSN--SLIDMYAKCGDIKFAQSVFNEM 510
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 184/368 (50%), Gaps = 13/368 (3%)
Query: 61 YDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMR 120
Y +L C+ + + +H ++K ++ L+ Y K DA +FDEM
Sbjct: 52 YGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMP 111
Query: 121 ERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQ 180
ERN VS+ + Y+ + + + L+ R+ R E N F + L E+
Sbjct: 112 ERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW 167
Query: 181 IHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 240
+HS I+K ++S+ +VG++L++ Y+ G + AR VFE + +D+V I+S Y + G
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 241 DEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVV---L 297
E++++L +++ G + N T+ + L A GL A K VH +L+ YV+ +
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILK---TCYVLDPRV 284
Query: 298 QNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENK 357
L+ +Y++ G ++ + +VF+ M + V+ W+ M+ + ++G E V+LF MRE
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA-F 343
Query: 358 VKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGE 417
V P+ T ++L+GC+ G G + +V K GF+ +I ++D+ + ++
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV--KVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 418 ALEFIKNM 425
A++ +
Sbjct: 402 AVKLFAEL 409
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/528 (39%), Positives = 338/528 (64%), Gaps = 3/528 (0%)
Query: 109 LSDARKMFDEMRER-NVVSWTAMISAYSQKAHSFEALNLFIRMLRSD-TEPNEFTFATVL 166
+S A K+F ++ + NV W +I Y++ +S A +L+ M S EP+ T+ ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 167 TSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVV 226
+ LG+ IHS++I+S F S IYV +SLL +YA G + A VF+ +PE+D+V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 227 SCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHV 286
+ ++I+G+A+ G EEA+ L+ ++ +G+ + T S+L+A + + AL GK+VH ++
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 287 LRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVV 346
++ + + N L+D+Y++CG + ++ +FD M ++ +SW +++VG + +G G+E +
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 347 ELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVV 406
ELF M + P +T++ +L CSH GM G F + + + EP IEH+GC+V
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE-EYKIEPRIEHFGCMV 367
Query: 407 DMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAG 466
D+L RAG+V +A E+IK+MP +P I +LLGAC VH + D+ EF +++++EP ++G
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
Query: 467 NYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREE 526
+YV+LSN+YAS RW DV ++R+ M V K PG S +E+ +H F D+SHP +
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDA 487
Query: 527 LSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIR 586
+ AK+K+++ + + GYVP +S V DV+EE+KE ++ HSEK+A+ F LI TPE +PI
Sbjct: 488 IYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPIT 547
Query: 587 VIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
V+KNLR+C DCH K VSKVY R++ +RD++RFHH G+CSC DYW
Sbjct: 548 VVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 161/297 (54%), Gaps = 4/297 (1%)
Query: 48 EMATLGL-EMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKC 106
EM GL E Y L+ A +R G+ +H+ +I++ + +Y++ L+ Y C
Sbjct: 110 EMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC 169
Query: 107 ECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVL 166
++ A K+FD+M E+++V+W ++I+ +++ EAL L+ M +P+ FT ++L
Sbjct: 170 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 229
Query: 167 TSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVV 226
++CA LGK++H +IK +++ + LLD+YA+ GR+ EA+ +F+ + +++ V
Sbjct: 230 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 289
Query: 227 SCTAIISGYAQLGLDEEAIELFRKLQ-VEGMISNYVTYASVLTALSGLAALGHGKQVHSH 285
S T++I G A G +EAIELF+ ++ EG++ +T+ +L A S + G +
Sbjct: 290 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 349
Query: 286 VL-RFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMS-ERTVISWNAMLVGYSKHG 340
+ ++I + ++D+ ++ G + + +M + V+ W +L + HG
Sbjct: 350 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/554 (40%), Positives = 337/554 (60%), Gaps = 22/554 (3%)
Query: 99 LIVFYNKCECLSDARKMFDEMRER----NVVSWTAMISAYSQKAHSFEALNLFIRMLRSD 154
++ Y++ DA ++F++M+E +VV+W+A IS Y+Q+ +EAL + +ML S
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 155 TEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFE-------SHIYVGSSLLDMYAKA 207
+PNE T +VL+ CA GK+IH IK + V + L+DMYAK
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 208 GRIHEARGVFECLP--ERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMIS--NYVTY 263
++ AR +F+ L ERDVV+ T +I GY+Q G +A+EL ++ E + N T
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 264 ASVLTALSGLAALGHGKQVHSHVLRFE---IPSYVVLQNSLIDMYSKCGSLTYSRRVFDN 320
+ L A + LAAL GKQ+H++ LR + +P +V N LIDMY+KCGS++ +R VFDN
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFV--SNCLIDMYAKCGSISDARLVFDN 538
Query: 321 MSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDR 380
M + ++W +++ GY HG G E + +F+ MR K D VT L VL CSH GM D+
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG-FKLDGVTLLVVLYACSHSGMIDQ 597
Query: 381 GLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGA 440
G+ F+ + G P EHY C+VD+LGRAGR+ AL I+ MP EP + + L
Sbjct: 598 GMEYFNRM-KTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656
Query: 441 CRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDP 500
CR+H V++GE+ +++ E+ + G+Y +LSNLYA+AGRW+DVTR+R LM+ K V K P
Sbjct: 657 CRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRP 716
Query: 501 GRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKE 560
G SW+E + TF D++HP +E+ + + K+ GYVP+ L+DVD+E+K+
Sbjct: 717 GCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKD 776
Query: 561 KVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRF 620
+L HSEKLAL +G++ TP+GA IR+ KNLR+C DCH ++S++ + LRD +RF
Sbjct: 777 DLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRF 836
Query: 621 HHIVEGTCSCGDYW 634
HH G+CSC YW
Sbjct: 837 HHFKNGSCSCKGYW 850
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 219/456 (48%), Gaps = 57/456 (12%)
Query: 26 FPPNPQN-------LKTLCSNGQLTKALIE---MATLGLEMRFEEYDTLLNACVNQRTLR 75
FPP+ +++ NG K L M +L + + AC ++R
Sbjct: 85 FPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVR 144
Query: 76 GGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYS 135
G+ HA + T + V++ L+ Y++C LSDARK+FDEM +VVSW ++I +Y+
Sbjct: 145 CGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYA 204
Query: 136 QKAHSFEALNLFIRMLRS-DTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHI 194
+ AL +F RM P+ T VL CA LGKQ+H + S ++
Sbjct: 205 KLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM 264
Query: 195 YVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVE 254
+VG+ L+DMYAK G + EA VF + +DVVS A+++GY+Q+G E+A+ LF K+Q E
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 255 -----------------------------------GMISNYVTYASVLTALSGLAALGHG 279
G+ N VT SVL+ + + AL HG
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 280 KQVHSHVLRFEIP-------SYVVLQNSLIDMYSKCGSLTYSRRVFDNMS--ERTVISWN 330
K++H + +++ I ++ N LIDMY+KC + +R +FD++S ER V++W
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 331 AMLVGYSKHGMGREVVELFNLMREEN-KVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIV 389
M+ GYS+HG + +EL + M EE+ + +P++ T L C+ G + +
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 390 DCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNM 425
+ P C++DM + G + +A NM
Sbjct: 505 RNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM 539
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 163/307 (53%), Gaps = 6/307 (1%)
Query: 95 LRTRLIVFYNKCECLSDARKMFDEM--RERNVVSWTAMISAYSQKAHSFEALNLFIRMLR 152
L + LI Y CLS A + + V W ++I +Y + + L LF M
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 153 SDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHE 212
P+ +TF V +C G+ H+L + + F S+++VG++L+ MY++ + +
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 213 ARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVE-GMISNYVTYASVLTALS 271
AR VF+ + DVVS +II YA+LG + A+E+F ++ E G + +T +VL +
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 272 GLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNA 331
L GKQ+H + E+ + + N L+DMY+KCG + + VF NMS + V+SWNA
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 332 MLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDC 391
M+ GYS+ G + V LF M+EE K+K D VT+ A +SG + G+ L V +++
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEE-KIKMDVVTWSAAISGYAQRGLGYEALGVCRQML-- 357
Query: 392 KDGFEPE 398
G +P
Sbjct: 358 SSGIKPN 364
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 138/322 (42%), Gaps = 55/322 (17%)
Query: 185 IIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERD--VVSCTAIISGYAQLGLDE 242
I+ N SH L+ Y G + A + P D V ++I Y G
Sbjct: 56 ILTLNLTSH------LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCAN 109
Query: 243 EAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLI 302
+ + LF + + T+ V A ++++ G+ H+ L S V + N+L+
Sbjct: 110 KCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALV 169
Query: 303 DMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDS 362
MYS+C SL+ +R+VFD MS V+SWN+++ Y+K G + +E+F+ M E +PD+
Sbjct: 170 AMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDN 229
Query: 363 VTYLAVLSGCSHGGMEDRG-----LAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGE 417
+T + VL C+ G G AV E++ ++ F C+VDM + G + E
Sbjct: 230 ITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI--QNMFVGN-----CLVDMYAKCGMMDE 282
Query: 418 ALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYAS 477
A NM + V +N + AG Y+
Sbjct: 283 ANTVFSNMSVKDV------------VSWNAMV---------------AG--------YSQ 307
Query: 478 AGRWEDVTRVRELMKEKAVTKD 499
GR+ED R+ E M+E+ + D
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMD 329
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 65 LNACVNQRTLRGGQRVHAHMIKTCYRP-PVYLRTRLIVFYNKCECLSDARKMFDEMRERN 123
L AC + LR G+++HA+ ++ P+++ LI Y KC +SDAR +FD M +N
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 124 VVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAF----GFELGK 179
V+WT++++ Y + EAL +F M R + + T VL +C+ + G E
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN 603
Query: 180 QIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLP 221
++ ++ S H + L+D+ +AGR++ A + E +P
Sbjct: 604 RMKTVFGVSPGPEHY---ACLVDLLGRAGRLNAALRLIEEMP 642
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/593 (38%), Positives = 357/593 (60%), Gaps = 7/593 (1%)
Query: 46 LIEMATLGLEMRFEEYDTLLNA---CVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVF 102
L +M G +++ +E T+LNA C ++ L + +H + +K + + +
Sbjct: 381 LRQMLAGGEDVKADEV-TILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVAS 439
Query: 103 YNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTF 162
Y KC LS A+++F +R + V SW A+I ++Q +L+ ++M S P+ FT
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 163 ATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPE 222
++L++C+ LGK++H II++ E ++V S+L +Y G + + +F+ + +
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 223 RDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQV 282
+ +VS +I+GY Q G + A+ +FR++ + G+ ++ V A S L +L G++
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA 619
Query: 283 HSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMG 342
H++ L+ + + SLIDMY+K GS+T S +VF+ + E++ SWNAM++GY HG+
Sbjct: 620 HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLA 679
Query: 343 REVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHY 402
+E ++LF M+ PD +T+L VL+ C+H G+ GL ++ G +P ++HY
Sbjct: 680 KEAIKLFEEMQRTGH-NPDDLTFLGVLTACNHSGLIHEGLRYLDQM-KSSFGLKPNLKHY 737
Query: 403 GCVVDMLGRAGRVGEALEFI-KNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIE 461
CV+DMLGRAG++ +AL + + M E I SLL +CR+H N+++GE V +L E+E
Sbjct: 738 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELE 797
Query: 462 PENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSH 521
PE NYV+LSNLYA G+WEDV +VR+ M E ++ KD G SWIEL++ + +F +R
Sbjct: 798 PEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFL 857
Query: 522 PMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPE 581
EE+ + L +K + GY PD V +D+ EE+K + L GHSEKLALT+GLI T E
Sbjct: 858 DGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSE 917
Query: 582 GAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
G IRV KNLRICVDCHN AK +SKV R++ +RD RFHH G CSCGDYW
Sbjct: 918 GTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 172/326 (52%), Gaps = 13/326 (3%)
Query: 59 EEYDTLLNACVNQRTLRGGQRVHAHMI-KTCYRPPVYLRTRLIVFYNKCECLSDARKMFD 117
E LL A ++ + G+++H + T R L TR+I Y C D+R +FD
Sbjct: 85 EALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFD 144
Query: 118 EMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRS-DTEPNEFTFATVLTSCAGAFGFE 176
+R +N+ W A+IS+YS+ E L FI M+ + D P+ FT+ V+ +CAG
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG 204
Query: 177 LGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYA 236
+G +H L++K+ ++VG++L+ Y G + +A +F+ +PER++VS ++I ++
Sbjct: 205 IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 237 QLGLDEEAIELFRKLQVE----GMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIP 292
G EE+ L ++ E + + T +VL + +G GK VH ++ +
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 293 SYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLM 352
+VL N+L+DMYSKCG +T ++ +F + + V+SWN M+ G+S G + F+++
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVL 381
Query: 353 RE----ENKVKPDSVTYLAVLSGCSH 374
R+ VK D VT L + C H
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 296 VLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREE 355
VL +I MY+ CGS SR VFD + + + WNA++ YS++ + EV+E F M
Sbjct: 121 VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIST 180
Query: 356 NKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRV 415
+ PD TY V+ C+ GM D G+ + + K G ++ +V G G V
Sbjct: 181 TDLLPDHFTYPCVIKACA--GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 416 GEALEFIKNMP 426
+AL+ MP
Sbjct: 239 TDALQLFDIMP 249
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/582 (37%), Positives = 347/582 (59%), Gaps = 2/582 (0%)
Query: 53 GLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDA 112
GL + + +L AC + + G +H+ ++K + V T L+ Y+ L+DA
Sbjct: 106 GLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDA 165
Query: 113 RKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGA 172
K+FDE+ +R+VV+WTA+ S Y+ EA++LF +M+ +P+ + VL++C
Sbjct: 166 HKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHV 225
Query: 173 FGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAII 232
+ G+ I + + + + +V ++L+++YAK G++ +AR VF+ + E+D+V+ + +I
Sbjct: 226 GDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMI 285
Query: 233 SGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIP 292
GYA +E IELF ++ E + + + L++ + L AL G+ S + R E
Sbjct: 286 QGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL 345
Query: 293 SYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLM 352
+ + + N+LIDMY+KCG++ VF M E+ ++ NA + G +K+G + +F
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFG-Q 404
Query: 353 REENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRA 412
E+ + PD T+L +L GC H G+ GL F+ I C + +EHYGC+VD+ GRA
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI-SCVYALKRTVEHYGCMVDLWGRA 463
Query: 413 GRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILS 472
G + +A I +MP P A + G+LL CR+ + + E V + L+ +EP NAGNYV LS
Sbjct: 464 GMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLS 523
Query: 473 NLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVK 532
N+Y+ GRW++ VR++M +K + K PG SWIEL+ +H F A D+SHP+ +++ AK++
Sbjct: 524 NIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLE 583
Query: 533 QLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLR 592
L + + G+VP V +DV+EE+KE+VL HSEKLA+ GLI T G IRV+KNLR
Sbjct: 584 DLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLR 643
Query: 593 ICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
+C DCH K +SK+ R++ +RD NRFH G+CSC DYW
Sbjct: 644 VCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 213/450 (47%), Gaps = 43/450 (9%)
Query: 21 LTVPSFPPNPQNLKTL----CSNGQLTKALIEMATLGLEMRFEEYDTLLNACVNQRTLRG 76
+TVPS Q +KTL C+ L + + + L +DT L + +RTL
Sbjct: 4 VTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLH-----HDTFLVNLLLKRTLFF 58
Query: 77 GQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQ 136
Q ++++ +F + N+ + ++I+ +
Sbjct: 59 RQTKYSYL------------------------------LFSHTQFPNIFLYNSLINGFVN 88
Query: 137 KAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYV 196
E L+LF+ + + + FTF VL +C A +LG +HSL++K F +
Sbjct: 89 NHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAA 148
Query: 197 GSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGM 256
+SLL +Y+ +GR+++A +F+ +P+R VV+ TA+ SGY G EAI+LF+K+ G+
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208
Query: 257 ISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRR 316
+ VL+A + L G+ + ++ E+ ++ +L+++Y+KCG + +R
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 317 VFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGG 376
VFD+M E+ +++W+ M+ GY+ + +E +ELF M +EN +KPD + + LS C+ G
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN-LKPDQFSIVGFLSSCASLG 327
Query: 377 MEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGS 436
D G ++D + F + ++DM + G + E K M + + +
Sbjct: 328 ALDLGEWGI-SLID-RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAA 385
Query: 437 LLGACRV-HYNVDIGEFVGQRLMEIEPENA 465
+ G + H + F + I P+ +
Sbjct: 386 ISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/619 (37%), Positives = 357/619 (57%), Gaps = 40/619 (6%)
Query: 51 TLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVF---YNKCE 107
+ LE E + L C Q L+ ++HA M+KT Y T+ + F +
Sbjct: 7 SFSLEHNLYETMSCLQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSD 63
Query: 108 CLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLT 167
L A+ +FD + W MI +S +L L+ RML S N +TF ++L
Sbjct: 64 FLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLK 123
Query: 168 SCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYA---------------------- 205
+C+ FE QIH+ I K +E+ +Y +SL++ YA
Sbjct: 124 ACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVS 183
Query: 206 ---------KAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGM 256
KAG++ A +F + E++ +S T +ISGY Q +++EA++LF ++Q +
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 243
Query: 257 ISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRR 316
+ V+ A+ L+A + L AL GK +HS++ + I VL LIDMY+KCG + +
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 317 VFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGG 376
VF N+ +++V +W A++ GY+ HG GRE + F M++ +KP+ +T+ AVL+ CS+ G
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG-IKPNVITFTAVLTACSYTG 362
Query: 377 MEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGS 436
+ + G +F+ + + +P IEHYGC+VD+LGRAG + EA FI+ MP +P A I G+
Sbjct: 363 LVEEGKLIFYSM-ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGA 421
Query: 437 LLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAV 496
LL ACR+H N+++GE +G+ L+ I+P + G YV +N++A +W+ R LMKE+ V
Sbjct: 422 LLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGV 481
Query: 497 TKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYD-VD 555
K PG S I L+ H F A DRSHP E++ +K + + K +E GYVP++ +L D VD
Sbjct: 482 AKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVD 541
Query: 556 EEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLR 615
++++E ++ HSEKLA+T+GLI T G IR++KNLR+C DCH K +SK+Y R + +R
Sbjct: 542 DDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMR 601
Query: 616 DKNRFHHIVEGTCSCGDYW 634
D+ RFHH +G CSCGDYW
Sbjct: 602 DRTRFHHFRDGKCSCGDYW 620
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 161/339 (47%), Gaps = 8/339 (2%)
Query: 19 QQLTVPSFPPNPQNLKTL---CSNGQLTKALIEMATLGLEMRFEEYDTLLNACVNQRTLR 75
Q++ S P N +L CSN + ++ ++ +E +N+ +N +
Sbjct: 104 QRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVT 163
Query: 76 GGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYS 135
G ++ + P +I Y K + A +F +M E+N +SWT MIS Y
Sbjct: 164 GNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYV 223
Query: 136 QKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIY 195
Q + EAL LF M SD EP+ + A L++CA E GK IHS + K+
Sbjct: 224 QADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV 283
Query: 196 VGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEG 255
+G L+DMYAK G + EA VF+ + ++ V + TA+ISGYA G EAI F ++Q G
Sbjct: 284 LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 343
Query: 256 MISNYVTYASVLTALSGLAALGHGKQVHSHVLR-FEIPSYVVLQNSLIDMYSKCGSLTYS 314
+ N +T+ +VLTA S + GK + + R + + + ++D+ + G L +
Sbjct: 344 IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA 403
Query: 315 RRVFDNMSER-TVISWNAMLVGYSKHG---MGREVVELF 349
+R M + + W A+L H +G E+ E+
Sbjct: 404 KRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEIL 442
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/610 (36%), Positives = 344/610 (56%), Gaps = 13/610 (2%)
Query: 33 LKTLCSNGQLTKALIEMATLGLEMRFE-------EYDTLLNACVNQRTLRGGQRVHAHMI 85
+ L NG + AL+E EMR E + A + R G+++HA +
Sbjct: 80 ISGLAQNGHFSTALVEF----FEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135
Query: 86 KTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALN 145
K V++ Y K DARK+FDE+ ERN+ +W A IS EA+
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIE 195
Query: 146 LFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYA 205
FI R D PN TF L +C+ LG Q+H L+++S F++ + V + L+D Y
Sbjct: 196 AFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG 255
Query: 206 KAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYAS 265
K +I + +F + ++ VS ++++ Y Q DE+A L+ + + + + ++ +S
Sbjct: 256 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISS 315
Query: 266 VLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERT 325
VL+A +G+A L G+ +H+H ++ + + + ++L+DMY KCG + S + FD M E+
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375
Query: 326 VISWNAMLVGYSKHGMGREVVELFNLMREEN-KVKPDSVTYLAVLSGCSHGGMEDRGLAV 384
+++ N+++ GY+ G + LF M P+ +T++++LS CS G + G+ +
Sbjct: 376 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435
Query: 385 FHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVH 444
F + G EP EHY C+VDMLGRAG V A EFIK MP +PT ++ G+L ACR+H
Sbjct: 436 FDSMRSTY-GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH 494
Query: 445 YNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSW 504
+G + L +++P+++GN+V+LSN +A+AGRW + VRE +K + K G SW
Sbjct: 495 GKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSW 554
Query: 505 IELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLL 564
I + +H F A DRSH + +E+ + +L + + AGY PD+ LYD++EE+K +
Sbjct: 555 ITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVS 614
Query: 565 GHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIV 624
HSEKLAL FGL+ P PIR+ KNLRIC DCH+F KFVS R++ +RD NRFH
Sbjct: 615 HHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFK 674
Query: 625 EGTCSCGDYW 634
+G CSC DYW
Sbjct: 675 DGICSCKDYW 684
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 197/422 (46%), Gaps = 13/422 (3%)
Query: 64 LLNACVNQRTLRGGQRVHAHMIKTC-YRPPVYLRTRLIVFYNKCECLSDARKMFDEMRER 122
LL ++ ++R G+ VHA ++KT PP +L LI Y+K + AR + R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 123 NVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIH 182
NVVSWT++IS +Q H AL F M R PN+FTF + A GKQIH
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 183 SLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDE 242
+L +K ++VG S DMY K +AR +F+ +PER++ + A IS G
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 243 EAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLI 302
EAIE F + + N +T+ + L A S L G Q+H VLR + V + N LI
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251
Query: 303 DMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDS 362
D Y KC + S +F M + +SW +++ Y ++ + L+ L ++ V+
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY-LRSRKDIVETSD 310
Query: 363 VTYLAVLSGCSHGGMEDRGLAVF-HEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEF 421
+VLS C+ + G ++ H + C E I +VDM G+ G + ++ +
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKAC---VERTIFVGSALVDMYGKCGCIEDSEQA 367
Query: 422 IKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAG---NYVILSNLYASA 478
MP E SL+G VD+ + + E+ P G NY+ +L ++
Sbjct: 368 FDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFE---EMAPRGCGPTPNYMTFVSLLSAC 423
Query: 479 GR 480
R
Sbjct: 424 SR 425
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/541 (40%), Positives = 330/541 (60%), Gaps = 12/541 (2%)
Query: 96 RTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDT 155
RT +I K + +AR++FDEM ER+V++WT M++ Y Q +A +F M
Sbjct: 175 RTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----P 230
Query: 156 EPNEFTFATVLTSCAGAFGFELGKQIHSLI-IKSNFESHIYVGSSLLDMYAKAGRIHEAR 214
E E ++ ++L E +++ ++ +K + ++++ + G I +AR
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP-----VIACNAMISGLGQKGEIAKAR 285
Query: 215 GVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLA 274
VF+ + ER+ S +I + + G + EA++LF +Q +G+ + T S+L+ + LA
Sbjct: 286 RVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLA 345
Query: 275 ALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLV 334
+L HGKQVH+ ++R + V + + L+ MY KCG L S+ +FD + +I WN+++
Sbjct: 346 SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIIS 405
Query: 335 GYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDG 394
GY+ HG+G E +++F M KP+ VT++A LS CS+ GM + GL ++ E ++ G
Sbjct: 406 GYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY-ESMESVFG 464
Query: 395 FEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVG 454
+P HY C+VDMLGRAGR EA+E I +M EP AA+ GSLLGACR H +D+ EF
Sbjct: 465 VKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCA 524
Query: 455 QRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTF 514
++L+EIEPEN+G Y++LSN+YAS GRW DV +R+LMK + V K PG SW E++ +H F
Sbjct: 525 KKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAF 584
Query: 515 -HASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALT 573
SHP +E + + +L +EAGY PD S L+DVDEE+K L HSE+LA+
Sbjct: 585 TRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVA 644
Query: 574 FGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDY 633
+ L+ EG PIRV+KNLR+C DCH K +SKV R++ LRD NRFHH G CSC DY
Sbjct: 645 YALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDY 704
Query: 634 W 634
W
Sbjct: 705 W 705
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 151/296 (51%), Gaps = 21/296 (7%)
Query: 99 LIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPN 158
L+ Y K + +ARK+FD M ERNVVSWTA++ Y A +LF +M E N
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM----PEKN 140
Query: 159 EFTFATVLTSCAGAFGFELGKQIHSLII-KSNFESHIYVGSSLLDMYAKAGRIHEARGVF 217
+ ++ +L + +++ +I K N +S++ K GR+ EAR +F
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIAR-----TSMIHGLCKEGRVDEAREIF 195
Query: 218 ECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALG 277
+ + ER V++ T +++GY Q ++A ++F + + V++ S+L + +
Sbjct: 196 DEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSML-----MGYVQ 246
Query: 278 HGKQVHSHVLRFEIP-SYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGY 336
+G+ + L +P V+ N++I + G + +RRVFD+M ER SW ++ +
Sbjct: 247 NGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIH 306
Query: 337 SKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCK 392
++G E ++LF LM+++ V+P T +++LS C+ G V ++V C+
Sbjct: 307 ERNGFELEALDLFILMQKQG-VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 8/180 (4%)
Query: 46 LIEMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNK 105
I M G+ F ++L+ C + +L G++VHA +++ + VY+ + L+ Y K
Sbjct: 319 FILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIK 378
Query: 106 CECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRM-LRSDTEPNEFTFAT 164
C L ++ +FD ++++ W ++IS Y+ EAL +F M L T+PNE TF
Sbjct: 379 CGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVA 438
Query: 165 VLTSCAGAFGFELGKQIH----SLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECL 220
L++C+ A E G +I+ S+ +H + ++DM +AGR +EA + + +
Sbjct: 439 TLSACSYAGMVEEGLKIYESMESVFGVKPITAHY---ACMVDMLGRAGRFNEAMEMIDSM 495
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 119/293 (40%), Gaps = 56/293 (19%)
Query: 205 AKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYA 264
++ G+IHEAR +F+ + + S ++++GY + +A +LF ++ +IS
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIIS------ 81
Query: 265 SVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSER 324
N L+ Y K G + +R+VFD M ER
Sbjct: 82 ---------------------------------WNGLVSGYMKNGEIDEARKVFDLMPER 108
Query: 325 TVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAV 384
V+SW A++ GY +G LF M E+NK V++ +L G G D +
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNK-----VSWTVMLIGFLQDGRIDDACKL 163
Query: 385 FHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVH 444
+ I D + + H C + GRV EA E M E + +++ +
Sbjct: 164 YEMIPDKDNIARTSMIHGLC------KEGRVDEAREIFDEMS-ERSVITWTTMVTGYGQN 216
Query: 445 YNVDIGEFVGQRLMEIEPENAG-NYVILSNLYASAGRWEDVTRVRELMKEKAV 496
VD +++ ++ PE ++ + Y GR ED + E+M K V
Sbjct: 217 NRVDD----ARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV 265
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 94/225 (41%), Gaps = 40/225 (17%)
Query: 299 NSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKV 358
N I S+ G + +R++FD+ +++ SWN+M+ GY + M R+ +LF+ M + N +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 359 --------------------------KPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCK 392
+ + V++ A++ G H G D ++F ++
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM---- 136
Query: 393 DGFEPEIEHYGCVVDMLG--RAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIG 450
PE V ++G + GR+ +A + + +P + A + G C+ VD
Sbjct: 137 ----PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCK-EGRVDEA 191
Query: 451 EFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKA 495
+ + E + + + Y R +D ++ ++M EK
Sbjct: 192 REIFDEMSE---RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT 233
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/575 (38%), Positives = 351/575 (61%), Gaps = 10/575 (1%)
Query: 64 LLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKC---ECLSDARKMFDEMR 120
L++ C +LR ++ A+ IK+ + V +LI F + +S AR +F+ M
Sbjct: 35 LISKC---NSLRELMQIQAYAIKS-HIEDVSFVAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 121 ERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQ 180
E ++V + +M YS+ + E +LF+ +L P+ +TF ++L +CA A E G+Q
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 181 IHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 240
+H L +K + ++YV +L++MY + + AR VF+ + E VV A+I+GYA+
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 210
Query: 241 DEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNS 300
EA+ LFR++Q + + N +T SVL++ + L +L GK +H + + YV + +
Sbjct: 211 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 270
Query: 301 LIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKP 360
LIDM++KCGSL + +F+ M + +W+AM+V Y+ HG + + +F MR EN V+P
Sbjct: 271 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN-VQP 329
Query: 361 DSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALE 420
D +T+L +L+ CSH G + G F ++V K G P I+HYG +VD+L RAG + +A E
Sbjct: 330 DEITFLGLLNACSHTGRVEEGRKYFSQMVS-KFGIVPSIKHYGSMVDLLSRAGNLEDAYE 388
Query: 421 FIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGR 480
FI +P PT + LL AC H N+D+ E V +R+ E++ + G+YVILSNLYA +
Sbjct: 389 FIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKK 448
Query: 481 WEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKE 540
WE V +R++MK++ K PG S IE++ ++H F + D +L + ++ + K
Sbjct: 449 WEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKL 508
Query: 541 AGYVPDMSCVLY-DVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHN 599
+GYVPD S V++ ++++++KE L HSEKLA+TFGL+ TP G IRV+KNLR+C DCHN
Sbjct: 509 SGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHN 568
Query: 600 FAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
AK +S ++GRKV LRD RFHH +G CSCGD+W
Sbjct: 569 AAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 151/282 (53%), Gaps = 2/282 (0%)
Query: 61 YDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMR 120
+ +LL AC + L G+++H +K VY+ LI Y +CE + AR +FD +
Sbjct: 132 FPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV 191
Query: 121 ERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQ 180
E VV + AMI+ Y+++ EAL+LF M +PNE T +VL+SCA +LGK
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 181 IHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 240
IH K +F ++ V ++L+DM+AK G + +A +FE + +D + +A+I YA G
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 241 DEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVL-RFEIPSYVVLQN 299
E+++ +F +++ E + + +T+ +L A S + G++ S ++ +F I +
Sbjct: 312 AEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYG 371
Query: 300 SLIDMYSKCGSLTYSRRVFDNMS-ERTVISWNAMLVGYSKHG 340
S++D+ S+ G+L + D + T + W +L S H
Sbjct: 372 SMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/575 (38%), Positives = 348/575 (60%), Gaps = 6/575 (1%)
Query: 65 LNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNV 124
L++C + + + GQ++H +K V + L+ Y + L++ RK+F M E +
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 125 VSWTAMISAYSQKAHSF-EALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHS 183
VSW ++I A ++ S EA+ F+ R+ + N TF++VL++ + ELGKQIH
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHG 541
Query: 184 LIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPER-DVVSCTAIISGYAQLGLDE 242
L +K+N ++L+ Y K G + +F + ER D V+ ++ISGY L
Sbjct: 542 LALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLA 601
Query: 243 EAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLI 302
+A++L + G + YA+VL+A + +A L G +VH+ +R + S VV+ ++L+
Sbjct: 602 KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALV 661
Query: 303 DMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDS 362
DMYSKCG L Y+ R F+ M R SWN+M+ GY++HG G E ++LF M+ + + PD
Sbjct: 662 DMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDH 721
Query: 363 VTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFI 422
VT++ VLS CSH G+ + G F + D G P IEH+ C+ D+LGRAG + + +FI
Sbjct: 722 VTFVGVLSACSHAGLLEEGFKHFESMSDSY-GLAPRIEHFSCMADVLGRAGELDKLEDFI 780
Query: 423 KNMPFEPTAAILGSLLGAC-RVH-YNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGR 480
+ MP +P I ++LGAC R + ++G+ + L ++EPENA NYV+L N+YA+ GR
Sbjct: 781 EKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGR 840
Query: 481 WEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKE 540
WED+ + R+ MK+ V K+ G SW+ + +H F A D+SHP + + K+K+L+ K ++
Sbjct: 841 WEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRD 900
Query: 541 AGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGA-PIRVIKNLRICVDCHN 599
AGYVP LYD+++E KE++L HSEKLA+ F L PIR++KNLR+C DCH+
Sbjct: 901 AGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHS 960
Query: 600 FAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
K++SK+ GR++ LRD NRFHH +G CSC D+W
Sbjct: 961 AFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 203/394 (51%), Gaps = 12/394 (3%)
Query: 41 QLTKALIEMATLGLEMRFEEYDTLLNA-----CVNQRTLRGGQRVHAHMIKTCYRP-PVY 94
+ TK ++M ++ +++ E Y LL++ + L+ G+ VH H+I T V
Sbjct: 292 EATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVG 350
Query: 95 LRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSD 154
+ L+ Y KC ++DAR++F M +++ VSW +MI+ Q EA+ + M R D
Sbjct: 351 IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHD 410
Query: 155 TEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEAR 214
P FT + L+SCA +LG+QIH +K + ++ V ++L+ +YA+ G ++E R
Sbjct: 411 ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECR 470
Query: 215 GVFECLPERDVVSCTAIISGYAQLGLD-EEAIELFRKLQVEGMISNYVTYASVLTALSGL 273
+F +PE D VS +II A+ EA+ F Q G N +T++SVL+A+S L
Sbjct: 471 KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530
Query: 274 AALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSE-RTVISWNAM 332
+ GKQ+H L+ I +N+LI Y KCG + ++F M+E R ++WN+M
Sbjct: 531 SFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 333 LVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCK 392
+ GY + + + ++L M + + + DS Y VLS + +RG+ V +
Sbjct: 591 ISGYIHNELLAKALDLVWFMLQTGQ-RLDSFMYATVLSAFASVATLERGMEV--HACSVR 647
Query: 393 DGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMP 426
E ++ +VDM + GR+ AL F MP
Sbjct: 648 ACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP 681
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 156/314 (49%), Gaps = 11/314 (3%)
Query: 63 TLLNACVNQRTLRGGQRV-HAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRE 121
+ + +CV R G R H+ + K VYL LI Y + ARK+FDEM
Sbjct: 8 SFVQSCVGHR---GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 122 RNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCA--GAFGFELGK 179
RN VSW ++S YS+ EAL M++ N++ F +VL +C G+ G G+
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 180 QIHSLIIKSNFESHIYVGSSLLDMYAKA-GRIHEARGVFECLPERDVVSCTAIISGYAQL 238
QIH L+ K ++ V + L+ MY K G + A F + ++ VS +IIS Y+Q
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 239 GLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAA--LGHGKQVHSHVLRFEIPSYVV 296
G A +F +Q +G T+ S++T L + +Q+ + + + + +
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 297 LQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREEN 356
+ + L+ ++K GSL+Y+R+VF+ M R ++ N ++VG + G E +LF M
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMI 304
Query: 357 KVKPDSVTYLAVLS 370
V P+S Y+ +LS
Sbjct: 305 DVSPES--YVILLS 316
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 154/317 (48%), Gaps = 19/317 (5%)
Query: 164 TVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPER 223
+ + SC G G + HS + K+ + +Y+ ++L++ Y + G AR VF+ +P R
Sbjct: 8 SFVQSCVGHRG--AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 224 DVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALG--HGKQ 281
+ VS I+SGY++ G +EA+ R + EG+ SN + SVL A + ++G G+Q
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 282 VHSHVLRFEIPSYVVLQNSLIDMYSKC-GSLTYSRRVFDNMSERTVISWNAMLVGYSKHG 340
+H + + V+ N LI MY KC GS+ Y+ F ++ + +SWN+++ YS+ G
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 341 MGREVVELFNLMREENKVKPDSVTYLA-VLSGCSHGGMEDRGLAVFHEIVDC---KDGFE 396
R +F+ M+ + +P T+ + V + CS + R L E + C K G
Sbjct: 186 DQRSAFRIFSSMQYDGS-RPTEYTFGSLVTTACSLTEPDVRLL----EQIMCTIQKSGLL 240
Query: 397 PEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFV--G 454
++ +V ++G + A + M + G ++G R + + +
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Query: 455 QRLMEIEPENAGNYVIL 471
++++ PE +YVIL
Sbjct: 301 NSMIDVSPE---SYVIL 314
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 13/219 (5%)
Query: 61 YDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMR 120
Y T+L+A + TL G VHA ++ C V + + L+ Y+KC L A + F+ M
Sbjct: 622 YATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP 681
Query: 121 ERNVVSWTAMISAYSQKAHSFEALNLFIRM-LRSDTEPNEFTFATVLTSCAGAFGFELG- 178
RN SW +MIS Y++ EAL LF M L T P+ TF VL++C+ A E G
Sbjct: 682 VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGF 741
Query: 179 KQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVV--------SCTA 230
K S+ I S + D+ +AG + + E +P + V +C
Sbjct: 742 KHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCR 801
Query: 231 IISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTA 269
A+LG ++A E+ +L+ E + NYV ++ A
Sbjct: 802 ANGRKAELG--KKAAEMLFQLEPENAV-NYVLLGNMYAA 837
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/563 (39%), Positives = 345/563 (61%), Gaps = 4/563 (0%)
Query: 73 TLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMIS 132
L G +HA++IK + + + LI Y+KC + F M +++++SWT +I+
Sbjct: 401 NLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIA 460
Query: 133 AYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFES 192
Y+Q EAL LF + + E +E ++L + + + K+IH I++
Sbjct: 461 GYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLD 520
Query: 193 HIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQ 252
+ + + L+D+Y K + A VFE + +DVVS T++IS A G + EA+ELFR++
Sbjct: 521 TV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV 579
Query: 253 VEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLT 312
G+ ++ V +L+A + L+AL G+++H ++LR + +++DMY+ CG L
Sbjct: 580 ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQ 639
Query: 313 YSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGC 372
++ VFD + + ++ + +M+ Y HG G+ VELF+ MR EN V PD +++LA+L C
Sbjct: 640 SAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN-VSPDHISFLALLYAC 698
Query: 373 SHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAA 432
SH G+ D G F +I++ + EP EHY C+VDMLGRA V EA EF+K M EPTA
Sbjct: 699 SHAGLLDEGRG-FLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAE 757
Query: 433 ILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMK 492
+ +LL ACR H +IGE QRL+E+EP+N GN V++SN++A GRW DV +VR MK
Sbjct: 758 VWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMK 817
Query: 493 EKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKF-KEAGYVPDMSCVL 551
+ K PG SWIE+D +H F A D+SHP +E+ K+ +++ K +E GYV D VL
Sbjct: 818 ASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVL 877
Query: 552 YDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRK 611
++VDE +K ++L GHSE++A+ +GL+ TP+ A +R+ KNLR+C DCH F K VSK++ R
Sbjct: 878 HNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRD 937
Query: 612 VSLRDKNRFHHIVEGTCSCGDYW 634
+ +RD NRFHH G CSCGD W
Sbjct: 938 IVMRDANRFHHFESGLCSCGDSW 960
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 197/401 (49%), Gaps = 19/401 (4%)
Query: 19 QQLTVPSFPPNPQNLKTLCSNGQLTKALIEMATLGLEMRFEEYDTLLNACVNQRTLRGGQ 78
+Q P P+P K C +G LT+A + E + +L C +R + G+
Sbjct: 44 RQSNQPVQVPSP---KLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGR 100
Query: 79 RVHAHMIKTCYRPPV-YLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQK 137
++H+ + KT + +L +L+ Y KC L DA K+FDEM +R +W MI AY
Sbjct: 101 QLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSN 160
Query: 138 AHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVG 197
AL L+ M +F +L +CA G ++HSL++K + S ++
Sbjct: 161 GEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIV 220
Query: 198 SSLLDMYAKAGRIHEARGVFECLPER-DVVSCTAIISGYAQLGLDEEAIELFRKLQVEGM 256
++L+ MYAK + AR +F+ E+ D V +I+S Y+ G E +ELFR++ + G
Sbjct: 221 NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP 280
Query: 257 ISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEI-PSYVVLQNSLIDMYSKCGSLTYSR 315
N T S LTA G + GK++H+ VL+ S + + N+LI MY++CG + +
Sbjct: 281 APNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAE 340
Query: 316 RVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSH- 374
R+ M+ V++WN+++ GY ++ M +E +E F+ M K D V+ ++++
Sbjct: 341 RILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH-KSDEVSMTSIIAASGRL 399
Query: 375 ----GGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGR 411
GME + H G++ ++ ++DM +
Sbjct: 400 SNLLAGMELHAYVIKH-------GWDSNLQVGNTLIDMYSK 433
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 188/357 (52%), Gaps = 5/357 (1%)
Query: 63 TLLNACVNQRTLRGGQRVHAHMIKT-CYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRE 121
+ L AC + G+ +HA ++K+ + +Y+ LI Y +C + A ++ +M
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 348
Query: 122 RNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQI 181
+VV+W ++I Y Q EAL F M+ + + +E + +++ + G ++
Sbjct: 349 ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 408
Query: 182 HSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLD 241
H+ +IK ++S++ VG++L+DMY+K F + ++D++S T +I+GYAQ
Sbjct: 409 HAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCH 468
Query: 242 EEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSL 301
EA+ELFR + + M + + S+L A S L ++ K++H H+LR + V+QN L
Sbjct: 469 VEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLD-TVIQNEL 527
Query: 302 IDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPD 361
+D+Y KC ++ Y+ RVF+++ + V+SW +M+ + +G E VELF M E + D
Sbjct: 528 VDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSAD 586
Query: 362 SVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEA 418
SV L +LS + ++G + ++ + GF E VVDM G + A
Sbjct: 587 SVALLCILSAAASLSALNKGREIHCYLL--RKGFCLEGSIAVAVVDMYACCGDLQSA 641
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/603 (37%), Positives = 349/603 (57%), Gaps = 34/603 (5%)
Query: 64 LLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERN 123
+++AC L G++V+A + + + + L+ Y KC + A+++FDE N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 124 VVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHS 183
+ AM S Y ++ + EAL +F M+ S P+ + + ++SC+ GK H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 184 LIIKSNFESHIYVGSSLLDMYAKA-------------------------------GRIHE 212
++++ FES + ++L+DMY K G +
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 213 ARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQV-EGMISNYVTYASVLTALS 271
A FE +PE+++VS IISG Q L EEAIE+F +Q EG+ ++ VT S+ +A
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 272 GLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNA 331
L AL K ++ ++ + I V L +L+DM+S+CG + +F++++ R V +W A
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541
Query: 332 MLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDC 391
+ + G +ELF+ M E+ +KPD V ++ L+ CSHGG+ +G +F+ ++
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQG-LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
Query: 392 KDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGE 451
G PE HYGC+VD+LGRAG + EA++ I++MP EP I SLL ACRV NV++
Sbjct: 601 H-GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 452 FVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQIL 511
+ +++ + PE G+YV+LSN+YASAGRW D+ +VR MKEK + K PG S I++
Sbjct: 660 YAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKT 719
Query: 512 HTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLA 571
H F + D SHP + A + ++S + G+VPD+S VL DVDE++K +L HSEKLA
Sbjct: 720 HEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLA 779
Query: 572 LTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCG 631
+ +GLI + +G IR++KNLR+C DCH+FAKF SKVY R++ LRD NRFH+I +G CSCG
Sbjct: 780 MAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCG 839
Query: 632 DYW 634
D+W
Sbjct: 840 DFW 842
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 206/400 (51%), Gaps = 34/400 (8%)
Query: 65 LNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNV 124
L+AC R G ++H ++K Y ++++ L+ FY +C L ARK+FDEM ERNV
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 125 VSWTAMISAYSQKAHSFEALNLFIRMLRSD-TEPNEFTFATVLTSCAGAFGFELGKQIHS 183
VSWT+MI Y+++ + +A++LF RM+R + PN T V+++CA E G+++++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 184 LIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEE 243
I S E + + S+L+DMY K I A+ +F+ ++ C A+ S Y + GL E
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 244 AIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLID 303
A+ +F + G+ + ++ S +++ S L + GK H +VLR S+ + N+LID
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 304 MYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHG----------------------- 340
MY KC + R+FD MS +TV++WN+++ GY ++G
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 341 --------MGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCK 392
+ E +E+F M+ + V D VT +++ S C H G D +++ I K
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE--K 498
Query: 393 DGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAA 432
+G + ++ +VDM R G A+ ++ +A
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 63 TLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRER 122
++ +AC + L + ++ ++ K + V L T L+ +++C A +F+ + R
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 123 NVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIH 182
+V +WTA I A + ++ A+ LF M+ +P+ F LT+C+ + GK+I
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594
Query: 183 SLIIKSNFES--HIYVGSSLLDMYAKAGRIHEARGVFECLP-ERDVVSCTAIISGYAQLG 239
++K + S ++ G ++D+ +AG + EA + E +P E + V ++++ G
Sbjct: 595 YSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
Query: 240 LDEEAIELFRKLQV 253
E A K+QV
Sbjct: 654 NVEMAAYAAEKIQV 667
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 10/178 (5%)
Query: 310 SLTYSRRVFDNM-SERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAV 368
SL++++ VF+N S T +N+++ GY+ G+ E + LF L + + PD T+
Sbjct: 82 SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF-LRMMNSGISPDKYTFPFG 140
Query: 369 LSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFE 428
LS C+ + G+ + IV K G+ ++ +V G + A + M
Sbjct: 141 LSACAKSRAKGNGIQIHGLIV--KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 429 PTAAILGSLLGACRVHYNVDIGE--FVGQRLMEIEPENAGNYVILSNLYASAGRWEDV 484
+ + G R + D + F R E+ P N V + + ++ + ED+
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTP----NSVTMVCVISACAKLEDL 252
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/552 (38%), Positives = 338/552 (61%), Gaps = 37/552 (6%)
Query: 115 MFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFG 174
+F + + ++ +TA I+ S +A L++++L S+ PNEFTF+++L SC+
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST--- 142
Query: 175 FELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIIS- 233
+ GK IH+ ++K YV + L+D+YAK G + A+ VF+ +PER +VS TA+I+
Sbjct: 143 -KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITC 201
Query: 234 ------------------------------GYAQLGLDEEAIELFRKLQVEGMIS-NYVT 262
GYAQ G +A+ LF+KL EG + +T
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 263 YASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMS 322
+ L+A S + AL G+ +H V I V + LIDMYSKCGSL + VF++
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
Query: 323 ERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGL 382
+ +++WNAM+ GY+ HG ++ + LFN M+ ++P +T++ L C+H G+ + G+
Sbjct: 322 RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGI 381
Query: 383 AVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACR 442
+F E + + G +P+IEHYGC+V +LGRAG++ A E IKNM + + + S+LG+C+
Sbjct: 382 RIF-ESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 443 VHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGR 502
+H + +G+ + + L+ + +N+G YV+LSN+YAS G +E V +VR LMKEK + K+PG
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Query: 503 SWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKV 562
S IE++ +H F A DR H +E+ ++++S + K GYVP+ + VL D++E +KE+
Sbjct: 501 STIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQS 560
Query: 563 LLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHH 622
L HSE+LA+ +GLI T G+P+++ KNLR+C DCH K +SK+ GRK+ +RD+NRFHH
Sbjct: 561 LQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHH 620
Query: 623 IVEGTCSCGDYW 634
+G+CSCGD+W
Sbjct: 621 FTDGSCSCGDFW 632
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 131/258 (50%), Gaps = 7/258 (2%)
Query: 97 TRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRML-RSDT 155
T +I Y K + AR +FD M ER++VSW MI Y+Q +AL LF ++L
Sbjct: 196 TAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKP 255
Query: 156 EPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARG 215
+P+E T L++C+ E G+ IH + S ++ V + L+DMY+K G + EA
Sbjct: 256 KPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVL 315
Query: 216 VFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQ-VEGMISNYVTYASVLTALSGLA 274
VF P +D+V+ A+I+GYA G ++A+ LF ++Q + G+ +T+ L A +
Sbjct: 316 VFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAG 375
Query: 275 ALGHGKQV-HSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMS-ERTVISWNAM 332
+ G ++ S + I + L+ + + G L + NM+ + + W+++
Sbjct: 376 LVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSV 435
Query: 333 LVGYSKHG---MGREVVE 347
L HG +G+E+ E
Sbjct: 436 LGSCKLHGDFVLGKEIAE 453
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 40/303 (13%)
Query: 180 QIHSLIIKSNFESHI---YVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYA 236
QIH+ I++ N H + L YA G+I + +F + D+ TA I+ +
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 237 QLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVV 296
GL ++A L+ +L + N T++S+L + S + GK +H+HVL+F +
Sbjct: 107 INGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPY 162
Query: 297 LQNSLIDMYSKCGSLTYSRRVFDNMSERT------------------------------- 325
+ L+D+Y+K G + +++VFD M ER+
Sbjct: 163 VATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERD 222
Query: 326 VISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVF 385
++SWN M+ GY++HG + + LF + E K KPD +T +A LS CS G + G +
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI- 281
Query: 386 HEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHY 445
H V ++ ++DM + G + EA+ + P + A + G Y
Sbjct: 282 HVFVKSSR-IRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 446 NVD 448
+ D
Sbjct: 341 SQD 343
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 117/274 (42%), Gaps = 55/274 (20%)
Query: 65 LNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNV 124
L+AC L G+ +H + + R V + T LI Y+KC L +A +F++ +++
Sbjct: 266 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 325
Query: 125 VSWTAMISAYSQKAHSFEALNLFIRMLR-SDTEPNEFTFATVLTSCAGAFGFELGKQIHS 183
V+W AMI+ Y+ +S +AL LF M + +P + TF L +C
Sbjct: 326 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQAC-------------- 371
Query: 184 LIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECL-------PERDVVSCTAIISGYA 236
A AG ++E +FE + P+ + C + G A
Sbjct: 372 ---------------------AHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRA 410
Query: 237 QLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPS--- 293
G + A E + + ++ ++ V ++SVL + GK++ +++ I +
Sbjct: 411 --GQLKRAYETIKNMNMD---ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGI 465
Query: 294 YVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVI 327
YV+L N +Y+ G +V + M E+ ++
Sbjct: 466 YVLLSN----IYASVGDYEGVAKVRNLMKEKGIV 495
>sp|Q9FK33|PP427_ARATH Pentatricopeptide repeat-containing protein At5g50390,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H58 PE=2
SV=1
Length = 701
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/578 (36%), Positives = 345/578 (59%), Gaps = 6/578 (1%)
Query: 61 YDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMR 120
YD L+ AC+ +++R +RV+ M+ + P Y+ R+++ + KC + DAR++FDE+
Sbjct: 126 YDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIP 185
Query: 121 ERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQ 180
ERN+ S+ ++IS + + EA LF M ++ TFA +L + AG +GKQ
Sbjct: 186 ERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQ 245
Query: 181 IHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 240
+H +K + +V L+DMY+K G I +AR FEC+PE+ V+ +I+GYA G
Sbjct: 246 LHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGY 305
Query: 241 DEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNS 300
EEA+ L ++ G+ + T + ++ + LA L KQ H+ ++R S +V +
Sbjct: 306 SEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTA 365
Query: 301 LIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKP 360
L+D YSK G + +R VFD + + +ISWNA++ GY+ HG G + V+LF M N V P
Sbjct: 366 LVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAAN-VAP 424
Query: 361 DSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALE 420
+ VT+LAVLS C++ G+ ++G +F + + G +P HY C++++LGR G + EA+
Sbjct: 425 NHVTFLAVLSACAYSGLSEQGWEIFLSMSEVH-GIKPRAMHYACMIELLGRDGLLDEAIA 483
Query: 421 FIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGR 480
FI+ P + T + +LL ACR+ N+++G V ++L + PE GNYV++ N+Y S G+
Sbjct: 484 FIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGK 543
Query: 481 WEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDR----SHPMREELSAKVKQLSV 536
+ V E ++ K ++ P +W+E+ H+F + DR + ++ ++ KV +L
Sbjct: 544 TAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELME 603
Query: 537 KFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVD 596
+ E GY + +L DVDE+++E+V HSEKLA+ +GL+ TPE P+++ +N RIC +
Sbjct: 604 EISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKN 663
Query: 597 CHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
CH +F+S V GR++ +RD +RFHH EG CSCG YW
Sbjct: 664 CHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 142/286 (49%), Gaps = 4/286 (1%)
Query: 142 EALNLF-IRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSL 200
EA LF I +R + T+ ++ +C K+++ ++ + FE Y+ + +
Sbjct: 105 EAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRI 164
Query: 201 LDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNY 260
L M+ K G I +AR +F+ +PER++ S +IISG+ G EA ELF+ + E
Sbjct: 165 LLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCET 224
Query: 261 VTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDN 320
T+A +L A +GL ++ GKQ+H L+ + + LIDMYSKCG + +R F+
Sbjct: 225 HTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFEC 284
Query: 321 MSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDR 380
M E+T ++WN ++ GY+ HG E + L MR+ V D T ++ + +
Sbjct: 285 MPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSG-VSIDQFTLSIMIRISTKLAKLEL 343
Query: 381 GLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMP 426
++ ++GFE EI +VD + GRV A +P
Sbjct: 344 TKQAHASLI--RNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP 387
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/606 (35%), Positives = 350/606 (57%), Gaps = 40/606 (6%)
Query: 65 LNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSD--ARKMFDEMRER 122
L+ C+N ++ ++H H+++ Y+ T+LI K D AR++ + ++ R
Sbjct: 56 LDDCINLNQIK---QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFR 112
Query: 123 NVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIH 182
N WTA+I Y+ + EA+ ++ M + + P FTF+ +L +C LG+Q H
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH 172
Query: 183 SLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDE 242
+ + +YVG++++DMY K I AR VF+ +PERDV+S T +I+ YA++G E
Sbjct: 173 AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNME 232
Query: 243 -------------------------------EAIELFRKLQVEGMISNYVTYASVLTALS 271
EA+E F +++ G+ ++ VT A ++A +
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACA 292
Query: 272 GLAALGHGKQVHSHVLR--FEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISW 329
L A + + + + +VV+ ++LIDMYSKCG++ + VF +M+ + V ++
Sbjct: 293 QLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTY 352
Query: 330 NAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIV 389
++M++G + HG +E + LF+ M + ++KP++VT++ L CSH G+ D+G VF +
Sbjct: 353 SSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMY 412
Query: 390 DCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDI 449
G +P +HY C+VD+LGR GR+ EALE IK M EP + G+LLGACR+H N +I
Sbjct: 413 QTF-GVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEI 471
Query: 450 GEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSW-IELD 508
E + L E+EP+ GNY++LSN+YASAG W V RVR+L+KEK + K P SW ++ +
Sbjct: 472 AEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKN 531
Query: 509 QILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSE 568
+H F + +HPM ++ K+++L + GY PD+S V YDV + K +L+ H+E
Sbjct: 532 GQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTE 591
Query: 569 KLALTFGLIGTPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTC 628
KLAL F L+ T + I ++KNLR+C+DCH F + S+V G+ + +RD RFHH G C
Sbjct: 592 KLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDC 651
Query: 629 SCGDYW 634
SCGD+W
Sbjct: 652 SCGDFW 657
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 144/312 (46%), Gaps = 42/312 (13%)
Query: 61 YDTLLNACVNQRTLRGGQRVHAHMIKT---CYRPPVYLRTRLIVFYNKCECLSDARKMFD 117
+ LL AC + L G++ HA + C+ VY+ +I Y KCE + ARK+FD
Sbjct: 152 FSALLKACGTMKDLNLGRQFHAQTFRLRGFCF---VYVGNTMIDMYVKCESIDCARKVFD 208
Query: 118 EMRERNVVSWTAMISAY-------------------------------SQKAHSFEALNL 146
EM ER+V+SWT +I+AY +Q A EAL
Sbjct: 209 EMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEY 268
Query: 147 FIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNF--ESHIYVGSSLLDMY 204
F RM +S +E T A +++CA + + + KS + H+ +GS+L+DMY
Sbjct: 269 FDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMY 328
Query: 205 AKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMIS-NYVTY 263
+K G + EA VF + ++V + +++I G A G +EA+ LF + + I N VT+
Sbjct: 329 SKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTF 388
Query: 264 ASVLTALSGLAALGHGKQVHSHVLR-FEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMS 322
L A S + G+QV + + F + ++D+ + G L + + MS
Sbjct: 389 VGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMS 448
Query: 323 -ERTVISWNAML 333
E W A+L
Sbjct: 449 VEPHGGVWGALL 460
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 264 ASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLT--YSRRVFDNM 321
+S+++ L L KQ+H HVLR + + LI +K G Y+RRV + +
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 322 SERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRG 381
R W A++ GY+ G E + ++ MR+E ++ P S T+ A+L C G M+D
Sbjct: 110 QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKE-EITPVSFTFSALLKAC--GTMKDLN 166
Query: 382 LA 383
L
Sbjct: 167 LG 168
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/610 (37%), Positives = 347/610 (56%), Gaps = 43/610 (7%)
Query: 33 LKTLCSNGQLTKALIEMATL-GLEMRFEEYD--TLLNACVNQRTLRGGQRVHAHMIKTCY 89
+++ +NG + + T+ G +R + Y +L AC T+ G+++H K
Sbjct: 112 IRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGL 171
Query: 90 RPPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIR 149
+++ L+ Y KC LS+AR + DEM R+VVSW +++ Y+Q +AL +
Sbjct: 172 SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCRE 231
Query: 150 MLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGR 209
M + T A++L + + + E+ +YV DM+ K G+
Sbjct: 232 MESVKISHDAGTMASLLPA----------------VSNTTTENVMYVK----DMFFKMGK 271
Query: 210 IHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTA 269
+ +VS +I Y + + EA+EL+ +++ +G + V+ SVL A
Sbjct: 272 -------------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318
Query: 270 LSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISW 329
+AL GK++H ++ R ++ ++L+N+LIDMY+KCG L +R VF+NM R V+SW
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSW 378
Query: 330 NAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIV 389
AM+ Y G G + V LF+ +++ V PDS+ ++ L+ CSH G+ + G + F +
Sbjct: 379 TAMISAYGFSGRGCDAVALFSKLQDSGLV-PDSIAFVTTLAACSHAGLLEEGRSCFKLMT 437
Query: 390 DCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDI 449
D P +EH C+VD+LGRAG+V EA FI++M EP + G+LLGACRVH + DI
Sbjct: 438 D-HYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDI 496
Query: 450 GEFVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQ 509
G +L ++ PE +G YV+LSN+YA AGRWE+VT +R +MK K + K+PG S +E+++
Sbjct: 497 GLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNR 556
Query: 510 ILHTFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEK 569
I+HTF DRSHP +E+ ++ L K KE GYVPD L+DV+EE KE L HSEK
Sbjct: 557 IIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEK 616
Query: 570 LALTFGLIGTPE-----GAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIV 624
LA+ F L+ T E IR+ KNLRIC DCH AK +S++ R++ +RD NRFH
Sbjct: 617 LAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFR 676
Query: 625 EGTCSCGDYW 634
G CSCGDYW
Sbjct: 677 FGVCSCGDYW 686
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 176/362 (48%), Gaps = 39/362 (10%)
Query: 64 LLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERN 123
+L+ + RTLR VH+ +I R L +L+ Y + ++ ARK+FDE+ ERN
Sbjct: 48 VLDTYPDIRTLR---TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERN 104
Query: 124 VVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHS 183
V+ MI +Y E + +F M + P+ +TF VL +C+ + +G++IH
Sbjct: 105 VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 184 LIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEE 243
K S ++VG+ L+ MY K G + EAR V + + RDVVS +++ GYAQ ++
Sbjct: 165 SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDD 224
Query: 244 AIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLID 303
A+E+ R+++ + + T AS+L A+S
Sbjct: 225 ALEVCREMESVKISHDAGTMASLLPAVSN------------------------------- 253
Query: 304 MYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDSV 363
+ ++ Y + +F M +++++SWN M+ Y K+ M E VEL++ M E + +PD+V
Sbjct: 254 --TTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRM-EADGFEPDAV 310
Query: 364 TYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIK 423
+ +VL C G + H ++ K P + ++DM + G + +A + +
Sbjct: 311 SITSVLPACGDTSALSLGKKI-HGYIERKK-LIPNLLLENALIDMYAKCGCLEKARDVFE 368
Query: 424 NM 425
NM
Sbjct: 369 NM 370
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/526 (40%), Positives = 320/526 (60%), Gaps = 3/526 (0%)
Query: 109 LSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTS 168
+ DA K+F +M +NV+SWT MI Q S EAL+LF MLR + F V+T+
Sbjct: 175 VDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITA 234
Query: 169 CAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSC 228
CA A F +G Q+H LIIK F YV +SL+ YA RI ++R VF+ V
Sbjct: 235 CANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVW 294
Query: 229 TAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLR 288
TA++SGY+ E+A+ +F + ++ N T+AS L + S L L GK++H ++
Sbjct: 295 TALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK 354
Query: 289 FEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVEL 348
+ + + NSL+ MYS G++ + VF + +++++SWN+++VG ++HG G+ +
Sbjct: 355 LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414
Query: 349 FNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDM 408
F M NK +PD +T+ +LS CSH G ++G +F+ + + + +I+HY C+VD+
Sbjct: 415 FGQMIRLNK-EPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDI 473
Query: 409 LGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNY 468
LGR G++ EA E I+ M +P + +LL ACR+H +VD GE + ++ +++ Y
Sbjct: 474 LGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAY 533
Query: 469 VILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELS 528
V+LSN+YASAGRW +V+++R MK+ + K PG SW+ + H F + D+ H R +
Sbjct: 534 VLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSR--IY 591
Query: 529 AKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVI 588
K++ L K KE GY PD L+DV++EQKE++L HSE+LA+ FGLI T EG+ + V+
Sbjct: 592 EKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVM 651
Query: 589 KNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
KNLR+C DCH K +S V GR++ LRD RFHH GTCSCGDYW
Sbjct: 652 KNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 47/328 (14%)
Query: 61 YDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMR 120
+ ++ AC N G +VH +IK + Y+ LI FY C+ + D+RK+FDE
Sbjct: 228 FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV 287
Query: 121 ERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQ 180
V WTA++S YS +AL++F MLR+ PN+ TFA+ L SC+ + GK+
Sbjct: 288 HEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE 347
Query: 181 IHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 240
+H + +K E+ +VG+SL+ MY+ +G +++A VF + ++ +VS +II G AQ G
Sbjct: 348 MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGR 407
Query: 241 DEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVH-------SHVLRFEIPS 293
+ A +F ++ + +T+ +L+A S L G+++ +H+ R +I
Sbjct: 408 GKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDR-KIQH 466
Query: 294 YVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMR 353
Y ++D+ +CG L +E EL M
Sbjct: 467 YTC----MVDILGRCGKL-------------------------------KEAEELIERM- 490
Query: 354 EENKVKPDSVTYLAVLSGCSHGGMEDRG 381
VKP+ + +LA+LS C DRG
Sbjct: 491 ---VVKPNEMVWLALLSACRMHSDVDRG 515
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 166/357 (46%), Gaps = 18/357 (5%)
Query: 91 PPVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRM 150
P V L T++I Y + L DA +FDEM R+VVSW +MIS + A+ LF M
Sbjct: 64 PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM 123
Query: 151 LRSDTEPNEFTFATVLTSCAGAFGFELGK--QIHSLIIKSNFESHIYVGSSLLDMYAKAG 208
E + ++ ++ C F GK Q L + + +S++ Y + G
Sbjct: 124 ----PERSVVSWTAMVNGC-----FRSGKVDQAERLFYQMPVKD-TAAWNSMVHGYLQFG 173
Query: 209 RIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLT 268
++ +A +F+ +P ++V+S T +I G Q EA++LF+ + + S + V+T
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVIT 233
Query: 269 ALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVIS 328
A + A G QVH +++ + SLI Y+ C + SR+VFD V
Sbjct: 234 ACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAV 293
Query: 329 WNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEI 388
W A+L GYS + + + +F+ M N + P+ T+ + L+ CS G D G +
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGML-RNSILPNQSTFASGLNSCSALGTLDWGKEMHG-- 350
Query: 389 VDCKDGFEPEIEHYGCVVDMLGRAGRVGEALE-FIKNMPFEPTAAILGSLLGACRVH 444
V K G E + +V M +G V +A+ FIK F+ + S++ C H
Sbjct: 351 VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK--IFKKSIVSWNSIIVGCAQH 405
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 50/217 (23%)
Query: 209 RIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLT 268
RI EAR VF +P V T +I+GY + +A+ LF ++ V ++S
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVS---------- 99
Query: 269 ALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVIS 328
NS+I +CG + + ++FD M ER+V+S
Sbjct: 100 -----------------------------WNSMISGCVECGDMNTAVKLFDEMPERSVVS 130
Query: 329 WNAMLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEI 388
W AM+ G + G + LF M VK D+ + +++ G G D L +F ++
Sbjct: 131 WTAMVNGCFRSGKVDQAERLFYQM----PVK-DTAAWNSMVHGYLQFGKVDDALKLFKQM 185
Query: 389 VDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNM 425
+ + ++ L + R GEAL+ KNM
Sbjct: 186 PG------KNVISWTTMICGLDQNERSGEALDLFKNM 216
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/528 (41%), Positives = 334/528 (63%), Gaps = 19/528 (3%)
Query: 112 ARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTS--- 168
A+ FD M ++ SW MI+ Y+++ +A LF M+ E NE ++ +++
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM----EKNEVSWNAMISGYIE 198
Query: 169 CAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLP-ERDVVS 227
C +L K H K + ++++ Y KA ++ A +F+ + +++V+
Sbjct: 199 CG-----DLEKASH--FFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251
Query: 228 CTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVL 287
A+ISGY + E+ ++LFR + EG+ N +S L S L+AL G+Q+H V
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 288 RFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVE 347
+ + + V SLI MY KCG L + ++F+ M ++ V++WNAM+ GY++HG + +
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 348 LFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIV-DCKDGFEPEIEHYGCVV 406
LF M + NK++PD +T++AVL C+H G+ + G+A F +V D K EP+ +HY C+V
Sbjct: 372 LFREMID-NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYK--VEPQPDHYTCMV 428
Query: 407 DMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAG 466
D+LGRAG++ EAL+ I++MPF P AA+ G+LLGACRVH NV++ EF ++L+++ +NA
Sbjct: 429 DLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAA 488
Query: 467 NYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREE 526
YV L+N+YAS RWEDV RVR+ MKE V K PG SWIE+ +H F +SDR HP +
Sbjct: 489 GYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDS 548
Query: 527 LSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIR 586
+ K+K+L K K AGY P++ L++V+EEQKEK+LL HSEKLA+ FG I P+G+ I+
Sbjct: 549 IHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQ 608
Query: 587 VIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
V KNLRIC DCH KF+S++ R++ +RD RFHH +G+CSCGDYW
Sbjct: 609 VFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 11/260 (4%)
Query: 63 TLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRER 122
+ L C L+ G+++H + K+ V T LI Y KC L DA K+F+ M+++
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK 348
Query: 123 NVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELG-KQI 181
+VV+W AMIS Y+Q ++ +AL LF M+ + P+ TF VL +C A +G
Sbjct: 349 DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYF 408
Query: 182 HSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISG----YAQ 237
S++ E + ++D+ +AG++ EA + +P R + + G +
Sbjct: 409 ESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKN 468
Query: 238 LGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVL 297
+ L E A E +L + + YV A++ + + + ++ ++P Y
Sbjct: 469 VELAEFAAEKLLQLNSQNA-AGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGY--- 524
Query: 298 QNSLIDMYSKCGSLTYSRRV 317
S I++ +K S R+
Sbjct: 525 --SWIEIRNKVHHFRSSDRI 542
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 150/342 (43%), Gaps = 53/342 (15%)
Query: 109 LSDARKMFDEMRERNVVSWTAMISAYSQK-AHSFEALNLFIRMLRSDTEPNEFTFATVLT 167
+ A ++F MR +N ++W +++ S+ + EA LF + EP+ F++ ++
Sbjct: 77 IDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI----PEPDTFSY-NIML 131
Query: 168 SCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVS 227
SC Y + +A+ F+ +P +D S
Sbjct: 132 SC----------------------------------YVRNVNFEKAQSFFDRMPFKDAAS 157
Query: 228 CTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVL 287
+I+GYA+ G E+A ELF + M N V++ ++ +SG G ++ SH
Sbjct: 158 WNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAM---ISGYIECGDLEKA-SHFF 209
Query: 288 RFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMS-ERTVISWNAMLVGYSKHGMGREVV 346
+ VV ++I Y K + + +F +M+ + +++WNAM+ GY ++ + +
Sbjct: 210 KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGL 269
Query: 347 ELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVV 406
+LF M EE ++P+S + L GCS G + H+IV K ++ ++
Sbjct: 270 KLFRAMLEEG-IRPNSSGLSSALLGCSELSALQLGRQI-HQIVS-KSTLCNDVTALTSLI 326
Query: 407 DMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVD 448
M + G +G+A + + M + A +++ H N D
Sbjct: 327 SMYCKCGELGDAWKLFEVMKKKDVVA-WNAMISGYAQHGNAD 367
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 231 IISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFE 290
II+ + G + A+ +F ++ + N +T+ S+L +S + + +H L E
Sbjct: 67 IIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISK----DPSRMMEAHQLFDE 118
Query: 291 IPSYVVLQ-NSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELF 349
IP N ++ Y + + ++ FD M + SWN M+ GY++ G + ELF
Sbjct: 119 IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF 178
Query: 350 NLMREENKVKPDSVTYLAVLSG 371
M E+N+ V++ A++SG
Sbjct: 179 YSMMEKNE-----VSWNAMISG 195
Score = 37.4 bits (85), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 299 NSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKH-GMGREVVELFNLMREENK 357
N +I + G + + RVF M + I+WN++L+G SK E +LF+ + E
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE--- 121
Query: 358 VKPDSVTYLAVLS 370
PD+ +Y +LS
Sbjct: 122 --PDTFSYNIMLS 132
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/607 (36%), Positives = 347/607 (57%), Gaps = 13/607 (2%)
Query: 39 NGQLTKALI---EMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYL 95
NG L +L EM G+ + T L AC L G ++H +K + V +
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 96 RTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDT 155
L+ Y+KC +++A K+F + +R+++SW AMI+ + + +AL+ F M ++
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 156 E--PNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFE--SHIYVGSSLLDMYAKAGRIH 211
+ P+EFT ++L +C+ GKQIH +++S F S + SL+D+Y K G +
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264
Query: 212 EARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALS 271
AR F+ + E+ ++S +++I GYAQ G EA+ LF++LQ + +S++ +
Sbjct: 265 SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA 324
Query: 272 GLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNA 331
A L GKQ+ + ++ + NS++DMY KCG + + + F M + VISW
Sbjct: 325 DFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384
Query: 332 MLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDC 391
++ GY KHG+G++ V +F M N ++PD V YLAVLS CSH GM G +F ++++
Sbjct: 385 VITGYGKHGLGKKSVRIFYEMLRHN-IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE- 442
Query: 392 KDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGE 451
G +P +EHY CVVD+LGRAGR+ EA I MP +P I +LL CRVH ++++G+
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 502
Query: 452 FVGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQIL 511
VG+ L+ I+ +N NYV++SNLY AG W + REL K + K+ G SW+E+++ +
Sbjct: 503 EVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREV 562
Query: 512 HTFHASDRSHPMREELSAKVKQLSVKFKEA-GYVPDMSCVLYDVDEEQKEKVLLGHSEKL 570
H F + + SHP+ + +K+ + +E GYV + L+D+D+E KE+ L HSEKL
Sbjct: 563 HFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKL 622
Query: 571 ALTFGLIG---TPEGAPIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGT 627
A+ L +G IRV KNLR+CVDCH F K +SK+ +RD RFH +G
Sbjct: 623 AIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGC 682
Query: 628 CSCGDYW 634
CSCGDYW
Sbjct: 683 CSCGDYW 689
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/361 (34%), Positives = 193/361 (53%), Gaps = 9/361 (2%)
Query: 63 TLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRER 122
++L C + G +VH +++K+ + LI Y KC A K+FD M ER
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 123 NVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIH 182
NVVSW+A++S + +L+LF M R PNEFTF+T L +C E G QIH
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 183 SLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDE 242
+K FE + VG+SL+DMY+K GRI+EA VF + +R ++S A+I+G+ G
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 243 EAIELFRKLQVEGMIS---NYVTYASVLTALSGLAALGHGKQVHSHVLR--FEIPSYVVL 297
+A++ F +Q E I + T S+L A S + GKQ+H ++R F PS +
Sbjct: 191 KALDTFGMMQ-EANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 298 QNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENK 357
SL+D+Y KCG L +R+ FD + E+T+ISW+++++GY++ G E + LF ++E N
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 358 VKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGE 417
+ DS +++ + + +G + V G E + VVDM + G V E
Sbjct: 310 -QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDE 366
Query: 418 A 418
A
Sbjct: 367 A 367
>sp|Q9LTF4|PP429_ARATH Putative pentatricopeptide repeat-containing protein At5g52630
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 588
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 358/573 (62%), Gaps = 4/573 (0%)
Query: 62 DTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRE 121
D LL++ + T++G Q +H +++K+ + LI FY+K + D+R+ F++ +
Sbjct: 20 DLLLSSARTRSTIKGLQ-LHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQ 78
Query: 122 RNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQI 181
++ +W+++IS ++Q + +L +M+ + P++ + SCA ++G+ +
Sbjct: 79 KSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSV 138
Query: 182 HSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLD 241
H L +K+ +++ ++VGSSL+DMYAK G I AR +F+ +P+R+VV+ + ++ GYAQ+G +
Sbjct: 139 HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGEN 198
Query: 242 EEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSL 301
EEA+ LF++ E + N +++SV++ + L G+Q+H ++ S + +SL
Sbjct: 199 EEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSL 258
Query: 302 IDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPD 361
+ +YSKCG + +VF+ + + + WNAML Y++H ++V+ELF M+ +KP+
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG-MKPN 317
Query: 362 SVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEF 421
+T+L VL+ CSH G+ D G F ++ + + EP +HY +VDMLGRAGR+ EALE
Sbjct: 318 FITFLNVLNACSHAGLVDEGRYYFDQMKESR--IEPTDKHYASLVDMLGRAGRLQEALEV 375
Query: 422 IKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAGRW 481
I NMP +PT ++ G+LL +C VH N ++ F ++ E+ P ++G ++ LSN YA+ GR+
Sbjct: 376 ITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRF 435
Query: 482 EDVTRVRELMKEKAVTKDPGRSWIELDQILHTFHASDRSHPMREELSAKVKQLSVKFKEA 541
ED + R+L++++ K+ G SW+E +HTF A +R H +E+ K+ +L + ++A
Sbjct: 436 EDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKA 495
Query: 542 GYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNFA 601
GY+ D S VL +VD ++K + + HSE+LA+ FGLI P PIRV+KNLR+C DCHN
Sbjct: 496 GYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAI 555
Query: 602 KFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
KF+S R + +RD NRFH +G CSC DYW
Sbjct: 556 KFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 88/161 (54%)
Query: 61 YDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMR 120
+ ++++ C N L G+++H IK+ + ++ + L+ Y+KC A ++F+E+
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 121 ERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQ 180
+N+ W AM+ AY+Q +H+ + + LF RM S +PN TF VL +C+ A + G+
Sbjct: 280 VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRY 339
Query: 181 IHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLP 221
+ +S E +SL+DM +AGR+ EA V +P
Sbjct: 340 YFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMP 380
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 13/193 (6%)
Query: 259 NYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVF 318
NY +L + + + G Q+H +V++ + ++ N+LI+ YSK SRR F
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 319 DNMSERTVISWNAMLVGYSKHGMGREVVELFNLM-----REENKVKPDSVTYLAVLSGCS 373
++ +++ +W++++ ++++ + +E M R ++ V P + A+LS C
Sbjct: 74 EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRC- 132
Query: 374 HGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAI 433
D G +V + K G++ ++ +VDM + G + A + MP
Sbjct: 133 -----DIGRSV--HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTW 185
Query: 434 LGSLLGACRVHYN 446
G + G ++ N
Sbjct: 186 SGMMYGYAQMGEN 198
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/531 (39%), Positives = 328/531 (61%), Gaps = 19/531 (3%)
Query: 109 LSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTS 168
+ +AR +FDEMRERNVV+WT MI+ Y Q A LF M E E ++ ++L
Sbjct: 188 VDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM----PEKTEVSWTSML-- 241
Query: 169 CAGAFGFELGKQIHSLIIKSNFE----SHIYVGSSLLDMYAKAGRIHEARGVFECLPERD 224
G+ L +I + FE + ++++ + + G I +AR VF+ + +RD
Sbjct: 242 ----LGYTLSGRIED--AEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRD 295
Query: 225 VVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHS 284
+ +I Y + G + EA++LF ++Q +G+ ++ + S+L+ + LA+L +G+QVH+
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHA 355
Query: 285 HVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGRE 344
H++R + V + + L+ MY KCG L ++ VFD S + +I WN+++ GY+ HG+G E
Sbjct: 356 HLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEE 415
Query: 345 VVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGC 404
+++F+ M + P+ VT +A+L+ CS+ G + GL +F E ++ K P +EHY C
Sbjct: 416 ALKIFHEMPSSGTM-PNKVTLIAILTACSYAGKLEEGLEIF-ESMESKFCVTPTVEHYSC 473
Query: 405 VVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPEN 464
VDMLGRAG+V +A+E I++M +P A + G+LLGAC+ H +D+ E ++L E EP+N
Sbjct: 474 TVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDN 533
Query: 465 AGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILHTF-HASDRSHPM 523
AG YV+LS++ AS +W DV VR+ M+ V+K PG SWIE+ + +H F ++HP
Sbjct: 534 AGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPE 593
Query: 524 REELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGA 583
+ + +++ +EAGY PD S VL+DVDEE+K L HSE+LA+ +GL+ PEG
Sbjct: 594 QAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGV 653
Query: 584 PIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 634
PIRV+KNLR+C DCH K +SKV R++ LRD NRFHH G CSC DYW
Sbjct: 654 PIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 135/250 (54%), Gaps = 2/250 (0%)
Query: 92 PVYLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRML 151
PV +IV + + +S AR++FD M +R+ +W MI AY +K EAL+LF +M
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 152 RSDTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIH 211
+ P+ + ++L+ CA + G+Q+H+ +++ F+ +YV S L+ MY K G +
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383
Query: 212 EARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALS 271
+A+ VF+ +D++ +IISGYA GL EEA+++F ++ G + N VT ++LTA S
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Query: 272 GLAALGHGKQV-HSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSER-TVISW 329
L G ++ S +F + V + +DM + G + + + ++M+ + W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 330 NAMLVGYSKH 339
A+L H
Sbjct: 504 GALLGACKTH 513
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 163/327 (49%), Gaps = 32/327 (9%)
Query: 94 YLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRS 153
Y++ R+IV +AR +F+ M ERNVVSWTAM+ Y Q+ EA +LF RM
Sbjct: 89 YIKNRMIV---------EARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM--- 136
Query: 154 DTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEA 213
E NE ++ + + ++++ ++ + + ++++ + GR+ EA
Sbjct: 137 -PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKD----VVASTNMIGGLCREGRVDEA 191
Query: 214 RGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGL 273
R +F+ + ER+VV+ T +I+GY Q + A +LF + + V++ S+L +
Sbjct: 192 RLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLS 247
Query: 274 AALGHGKQVHSHVLRFEIPSY--VVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNA 331
+ ++ FE+ V+ N++I + + G ++ +RRVFD M +R +W
Sbjct: 248 GRIEDAEEF------FEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRG 301
Query: 332 MLVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDC 391
M+ Y + G E ++LF M+++ V+P + +++LS C+ G V +V C
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQG-VRPSFPSLISILSVCATLASLQYGRQVHAHLVRC 360
Query: 392 KDGFEPEIEHYGCVVDMLGRAGRVGEA 418
+ F+ ++ ++ M + G + +A
Sbjct: 361 Q--FDDDVYVASVLMTMYVKCGELVKA 385
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 91/174 (52%), Gaps = 1/174 (0%)
Query: 48 EMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCE 107
+M G+ F ++L+ C +L+ G++VHAH+++ + VY+ + L+ Y KC
Sbjct: 321 QMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCG 380
Query: 108 CLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLT 167
L A+ +FD ++++ W ++IS Y+ EAL +F M S T PN+ T +LT
Sbjct: 381 ELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440
Query: 168 SCAGAFGFELGKQI-HSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECL 220
+C+ A E G +I S+ K + S +DM +AG++ +A + E +
Sbjct: 441 ACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM 494
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 49/264 (18%)
Query: 109 LSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTS 168
+++ARK FD ++ + + SW +++S Y EA LF M
Sbjct: 33 INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM------------------ 74
Query: 169 CAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSC 228
E ++ + L+ Y K I EAR VFE +PER+VVS
Sbjct: 75 ---------------------SERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSW 113
Query: 229 TAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLR 288
TA++ GY Q G+ EA LF ++ +S V + ++ G+ + L
Sbjct: 114 TAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID---------DGRIDKARKLY 164
Query: 289 FEIP-SYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVE 347
+P VV ++I + G + +R +FD M ER V++W M+ GY ++ +
Sbjct: 165 DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARK 224
Query: 348 LFNLMREENKVKPDSVTYLAVLSG 371
LF +M E+ +V S+ LSG
Sbjct: 225 LFEVMPEKTEVSWTSMLLGYTLSG 248
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 132/315 (41%), Gaps = 57/315 (18%)
Query: 184 LIIKSNFESHIYVGSSL-LDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDE 242
LI++ + + V S + ++ G+I+EAR F+ L + + S +I+SGY GL +
Sbjct: 6 LILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPK 65
Query: 243 EAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSYVVLQNSLI 302
EA +LF ++ ++S N L+
Sbjct: 66 EARQLFDEMSERNVVS---------------------------------------WNGLV 86
Query: 303 DMYSKCGSLTYSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMREENKVKPDS 362
Y K + +R VF+ M ER V+SW AM+ GY + GM E LF M E N+
Sbjct: 87 SGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNE----- 141
Query: 363 VTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGFEPEIEHYGCVVDMLGRAGRVGEALEFI 422
V++ + G G D+ ++ +++ KD + ++ L R GRV EA
Sbjct: 142 VSWTVMFGGLIDDGRIDKARKLY-DMMPVKD-----VVASTNMIGGLCREGRVDEARLIF 195
Query: 423 KNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAG-NYVILSNLYASAGRW 481
M E +++ R + VD V ++L E+ PE ++ + Y +GR
Sbjct: 196 DEMR-ERNVVTWTTMITGYRQNNRVD----VARKLFEVMPEKTEVSWTSMLLGYTLSGRI 250
Query: 482 EDVTRVRELMKEKAV 496
ED E+M K V
Sbjct: 251 EDAEEFFEVMPMKPV 265
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/608 (36%), Positives = 343/608 (56%), Gaps = 39/608 (6%)
Query: 64 LLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCECLSDARKMFDEMRERN 123
+L A L G +H K ++ T + Y C ++ AR +FDEM R+
Sbjct: 117 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRD 176
Query: 124 VVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLTSCAGAFGFELGKQIHS 183
VV+W MI Y + EA LF M S+ P+E ++++C + I+
Sbjct: 177 VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYE 236
Query: 184 LIIKSN--FESHI-------YVGSSLLDM----------------------YAKAGRIHE 212
+I+++ ++H+ Y G+ +DM Y+K GR+ +
Sbjct: 237 FLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296
Query: 213 ARGVFECLPERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSG 272
A+ +F+ ++D+V T +IS Y + +EA+ +F ++ G+ + V+ SV++A +
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 273 LAALGHGKQVHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAM 332
L L K VHS + + S + + N+LI+MY+KCG L +R VF+ M R V+SW++M
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSM 416
Query: 333 LVGYSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCK 392
+ S HG + + LF M++EN V+P+ VT++ VL GCSH G+ + G +F + D +
Sbjct: 417 INALSMHGEASDALSLFARMKQEN-VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTD-E 474
Query: 393 DGFEPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEF 452
P++EHYGC+VD+ GRA + EALE I++MP I GSL+ ACR+H +++G+F
Sbjct: 475 YNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKF 534
Query: 453 VGQRLMEIEPENAGNYVILSNLYASAGRWEDVTRVRELMKEKAVTKDPGRSWIELDQILH 512
+R++E+EP++ G V++SN+YA RWEDV +R +M+EK V K+ G S I+ + H
Sbjct: 535 AAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSH 594
Query: 513 TFHASDRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLAL 572
F D+ H E+ AK+ ++ K K AGYVPD VL DV+EE+K+ ++L HSEKLAL
Sbjct: 595 EFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLAL 654
Query: 573 TFGLIGTPEG------APIRVIKNLRICVDCHNFAKFVSKVYGRKVSLRDKNRFHHIVEG 626
FGL+ + IR++KNLR+C DCH F K VSKVY R++ +RD+ RFH G
Sbjct: 655 CFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNG 714
Query: 627 TCSCGDYW 634
CSC DYW
Sbjct: 715 LCSCRDYW 722
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 155/349 (44%), Gaps = 52/349 (14%)
Query: 144 LNLFIRMLRSDTEP-----------------NEFTFATVLTSCAGAFGFELGKQIHSLII 186
N F+R L +EP ++F+F +L + + G ++H +
Sbjct: 79 FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 187 KSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAIE 246
K +V + +DMYA GRI+ AR VF+ + RDVV+ +I Y + GL +EA +
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFK 198
Query: 247 LFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVH-----------SHVLRFEIPSY- 294
LF +++ ++ + + ++++A + + + ++ +H+L + Y
Sbjct: 199 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYA 258
Query: 295 -------------------VVLQNSLIDMYSKCGSLTYSRRVFDNMSERTVISWNAMLVG 335
+ + +++ YSKCG L ++ +FD ++ ++ W M+
Sbjct: 259 GAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISA 318
Query: 336 YSKHGMGREVVELFNLMREENKVKPDSVTYLAVLSGCSHGGMEDRGLAVFHEIVDCKDGF 395
Y + +E + +F M +KPD V+ +V+S C++ G+ D+ V H + +G
Sbjct: 319 YVESDYPQEALRVFEEMCCSG-IKPDVVSMFSVISACANLGILDKAKWV-HSCIHV-NGL 375
Query: 396 EPEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVH 444
E E+ +++M + G + + + MP + S++ A +H
Sbjct: 376 ESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVS-WSSMINALSMH 423
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 48 EMATLGLEMRFEEYDTLLNACVNQRTLRGGQRVHAHMIKTCYRPPVYLRTRLIVFYNKCE 107
EM G++ ++++AC N L + VH+ + + + LI Y KC
Sbjct: 334 EMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 108 CLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRSDTEPNEFTFATVLT 167
L R +F++M RNVVSW++MI+A S + +AL+LF RM + + EPNE TF VL
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 168 SCAGAFGFELGKQIH-SLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLPERDVV 226
C+ + E GK+I S+ + N + ++D++ +A + EA V E +P V
Sbjct: 454 GCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP----V 509
Query: 227 SCTAIISG 234
+ +I G
Sbjct: 510 ASNVVIWG 517
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 231,897,226
Number of Sequences: 539616
Number of extensions: 9707492
Number of successful extensions: 29325
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 22715
Number of HSP's gapped (non-prelim): 1969
length of query: 634
length of database: 191,569,459
effective HSP length: 124
effective length of query: 510
effective length of database: 124,657,075
effective search space: 63575108250
effective search space used: 63575108250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)