Query 006707
Match_columns 634
No_of_seqs 256 out of 1837
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 06:49:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006707.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006707hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l0q_A Xylulose kinase; xlylul 100.0 1.5E-91 5E-96 790.3 46.1 532 54-614 4-539 (554)
2 3ll3_A Gluconate kinase; xylul 100.0 5.8E-90 2E-94 768.5 44.5 482 52-612 1-486 (504)
3 3ifr_A Carbohydrate kinase, FG 100.0 1.2E-89 4.2E-94 766.6 41.9 483 54-612 6-493 (508)
4 3hz6_A Xylulokinase; xylulose, 100.0 1.7E-89 5.8E-94 766.0 41.6 473 54-598 4-490 (511)
5 3jvp_A Ribulokinase; PSI-II, N 100.0 3E-87 1E-91 757.5 43.6 497 54-598 4-529 (572)
6 4e1j_A Glycerol kinase; struct 100.0 9.7E-85 3.3E-89 728.7 42.1 466 51-595 22-504 (520)
7 3h3n_X Glycerol kinase; ATP-bi 100.0 2.6E-84 8.8E-89 723.7 42.3 464 54-595 4-482 (506)
8 2itm_A Xylulose kinase, xylulo 100.0 2.3E-84 7.9E-89 721.0 38.9 475 56-611 1-479 (484)
9 3g25_A Glycerol kinase; IDP007 100.0 8.4E-84 2.9E-88 719.0 41.3 466 51-595 3-483 (501)
10 2p3r_A Glycerol kinase; glycer 100.0 1.9E-84 6.6E-89 725.1 35.8 466 54-596 2-481 (510)
11 3ezw_A Glycerol kinase; glycer 100.0 3.3E-84 1.1E-88 726.1 33.7 461 54-590 3-477 (526)
12 4bc3_A Xylulose kinase; transf 100.0 1.4E-83 4.8E-88 722.5 36.3 488 55-616 10-534 (538)
13 2w40_A Glycerol kinase, putati 100.0 3.4E-82 1.2E-86 706.6 40.1 465 55-598 4-490 (503)
14 2zf5_O Glycerol kinase; hypert 100.0 4.2E-82 1.4E-86 704.9 39.4 463 55-598 3-475 (497)
15 2d4w_A Glycerol kinase; alpha 100.0 1.3E-81 4.3E-86 701.9 39.4 466 55-600 2-487 (504)
16 2dpn_A Glycerol kinase; thermu 100.0 4.1E-81 1.4E-85 696.6 41.1 462 55-598 2-479 (495)
17 3i8b_A Xylulose kinase; strain 100.0 3.9E-81 1.3E-85 698.1 34.1 446 54-588 4-495 (515)
18 3h6e_A Carbohydrate kinase, FG 100.0 8.5E-75 2.9E-79 640.7 32.3 418 54-562 5-436 (482)
19 2uyt_A Rhamnulokinase; rhamnos 100.0 2.3E-72 8E-77 625.6 26.6 464 52-610 1-487 (489)
20 1hux_A Activator of (R)-2-hydr 99.6 4E-15 1.4E-19 152.1 14.3 131 391-562 125-257 (270)
21 3h1q_A Ethanolamine utilizatio 98.7 4.5E-06 1.5E-10 84.5 23.9 73 483-559 199-272 (272)
22 2qm1_A Glucokinase; alpha-beta 98.2 2.4E-06 8.1E-11 88.9 9.7 84 51-145 3-87 (326)
23 2ch5_A NAGK protein; transfera 98.1 4.8E-06 1.6E-10 87.4 9.2 77 51-132 2-79 (347)
24 1zc6_A Probable N-acetylglucos 98.1 1.1E-05 3.6E-10 83.4 10.4 74 51-130 5-82 (305)
25 1z05_A Transcriptional regulat 98.0 2.8E-05 9.6E-10 84.2 11.4 91 55-164 108-199 (429)
26 3vgl_A Glucokinase; ROK family 98.0 1.8E-05 6E-10 82.4 9.2 88 55-167 2-90 (321)
27 1z6r_A MLC protein; transcript 97.9 1.8E-05 6.2E-10 85.0 8.8 81 54-145 84-165 (406)
28 2hoe_A N-acetylglucosamine kin 97.9 1.8E-05 6.3E-10 84.2 8.7 81 55-145 87-168 (380)
29 2yhw_A Bifunctional UDP-N-acet 97.9 4E-05 1.4E-09 80.4 10.6 79 55-145 30-109 (343)
30 3r8e_A Hypothetical sugar kina 97.7 4.8E-05 1.6E-09 79.1 7.8 78 54-145 18-96 (321)
31 4db3_A Glcnac kinase, N-acetyl 97.7 0.0001 3.5E-09 76.8 10.2 75 56-145 25-100 (327)
32 3htv_A D-allose kinase, alloki 97.6 5.3E-05 1.8E-09 78.4 5.4 87 55-163 7-94 (310)
33 2e2o_A Hexokinase; acetate and 97.5 0.0002 7E-09 73.3 8.9 56 56-116 3-58 (299)
34 2ews_A Pantothenate kinase; PA 97.3 0.0052 1.8E-07 62.5 16.1 75 480-559 206-286 (287)
35 4ehu_A Activator of 2-hydroxyi 97.3 0.00062 2.1E-08 68.8 9.3 70 489-562 185-255 (276)
36 2i7n_A Pantothenate kinase 1; 97.3 0.0023 7.9E-08 66.9 13.3 75 480-559 275-358 (360)
37 4htl_A Beta-glucoside kinase; 97.2 0.00093 3.2E-08 68.5 9.2 71 56-145 5-76 (297)
38 4ehu_A Activator of 2-hydroxyi 97.1 0.00074 2.5E-08 68.2 7.8 64 56-132 2-65 (276)
39 3epq_A Putative fructokinase; 97.1 0.00067 2.3E-08 69.8 7.0 59 55-132 3-61 (302)
40 1woq_A Inorganic polyphosphate 97.1 0.001 3.4E-08 67.0 8.2 55 55-116 12-68 (267)
41 4b9q_A Chaperone protein DNAK; 97.1 0.00075 2.6E-08 76.3 7.8 86 482-567 301-387 (605)
42 3qfu_A 78 kDa glucose-regulate 97.1 0.0011 3.6E-08 70.5 8.5 80 482-561 311-392 (394)
43 3vov_A Glucokinase, hexokinase 97.1 0.00054 1.8E-08 70.5 5.9 65 56-132 2-66 (302)
44 3i33_A Heat shock-related 70 k 97.0 0.0012 4E-08 70.5 8.1 83 482-564 319-403 (404)
45 4gni_A Putative heat shock pro 97.0 0.0011 3.7E-08 71.0 7.9 82 482-563 312-402 (409)
46 2yhx_A Hexokinase B; transfera 96.7 0.004 1.4E-07 67.5 9.3 75 53-131 59-138 (457)
47 1dkg_D Molecular chaperone DNA 96.7 0.0021 7.2E-08 68.0 6.9 80 482-561 301-381 (383)
48 1zbs_A Hypothetical protein PG 96.7 0.0021 7.2E-08 65.5 6.6 66 56-130 1-66 (291)
49 2ap1_A Putative regulator prot 96.5 0.0057 2E-07 63.2 8.8 64 55-130 24-87 (327)
50 3mcp_A Glucokinase; structural 96.5 0.0019 6.4E-08 68.3 4.8 76 55-145 9-86 (366)
51 2aa4_A Mannac kinase, putative 96.3 0.0079 2.7E-07 60.9 8.1 53 56-115 2-54 (289)
52 2v7y_A Chaperone protein DNAK; 96.2 0.0063 2.2E-07 67.2 7.3 83 482-564 270-353 (509)
53 2gup_A ROK family protein; sug 96.1 0.0066 2.3E-07 61.6 6.4 58 56-131 5-62 (292)
54 3d2f_A Heat shock protein homo 96.1 0.0076 2.6E-07 68.8 7.3 84 482-565 302-386 (675)
55 1zxo_A Conserved hypothetical 96.0 0.0014 4.7E-08 66.9 0.6 65 56-131 1-65 (291)
56 1bdg_A Hexokinase; phosphotran 95.8 0.023 7.9E-07 61.5 9.5 73 53-130 66-142 (451)
57 1cza_N Hexokinase type I; stru 95.8 0.016 5.6E-07 68.3 8.8 76 53-132 76-157 (917)
58 1saz_A Probable butyrate kinas 95.7 0.0048 1.7E-07 65.5 3.6 69 55-130 2-73 (381)
59 3djc_A Type III pantothenate k 95.7 0.016 5.3E-07 58.3 6.9 64 56-132 3-66 (266)
60 1yuw_A Heat shock cognate 71 k 95.7 0.014 4.9E-07 65.0 7.1 82 483-564 299-382 (554)
61 3zyy_X Iron-sulfur cluster bin 95.6 0.02 6.8E-07 64.1 8.0 78 54-131 205-297 (631)
62 2q2r_A Glucokinase 1, putative 95.3 0.011 3.7E-07 62.5 4.3 67 54-132 28-98 (373)
63 3lm2_A Putative kinase; struct 95.1 0.014 4.8E-07 57.2 4.1 58 54-131 5-62 (226)
64 2kho_A Heat shock protein 70; 95.0 0.0061 2.1E-07 68.8 1.6 52 513-564 332-384 (605)
65 1sz2_A Glucokinase, glucose ki 94.9 0.047 1.6E-06 56.5 7.8 32 54-85 13-45 (332)
66 1jce_A ROD shape-determining p 94.8 0.011 3.9E-07 61.3 2.6 76 482-560 242-324 (344)
67 3o8m_A Hexokinase; rnaseh-like 94.4 0.096 3.3E-06 57.0 8.8 76 52-130 77-155 (485)
68 4a2a_A Cell division protein F 94.3 0.16 5.3E-06 54.5 10.2 65 482-546 290-360 (419)
69 4a2a_A Cell division protein F 94.2 0.041 1.4E-06 59.1 5.4 77 54-132 7-86 (419)
70 2ych_A Competence protein PILM 94.0 0.11 3.9E-06 54.4 8.4 62 484-545 274-337 (377)
71 1cza_N Hexokinase type I; stru 94.0 0.11 3.8E-06 61.2 9.1 76 52-130 523-601 (917)
72 3bex_A Type III pantothenate k 93.9 0.072 2.5E-06 52.9 6.3 61 56-131 4-64 (249)
73 3cqy_A Anhydro-N-acetylmuramic 93.8 0.37 1.3E-05 50.3 11.5 81 52-132 2-100 (370)
74 2h3g_X Biosynthetic protein; p 93.7 0.11 3.8E-06 52.1 7.2 63 492-562 191-253 (268)
75 2ych_A Competence protein PILM 93.3 0.18 6.1E-06 52.8 8.3 71 55-132 13-86 (377)
76 3qbx_A Anhydro-N-acetylmuramic 93.1 0.17 5.7E-06 52.9 7.6 84 482-571 257-347 (371)
77 2ivn_A O-sialoglycoprotein end 92.9 0.23 7.9E-06 51.3 8.4 80 483-566 217-303 (330)
78 3eno_A Putative O-sialoglycopr 92.8 0.41 1.4E-05 49.5 10.0 83 483-569 222-311 (334)
79 2ivn_A O-sialoglycoprotein end 92.6 0.35 1.2E-05 49.9 9.2 74 56-131 2-76 (330)
80 3ttc_A HYPF, transcriptional r 91.6 0.58 2E-05 52.7 10.1 76 482-561 571-651 (657)
81 3vth_A Hydrogenase maturation 91.6 0.43 1.5E-05 54.8 9.1 72 492-564 672-750 (761)
82 2zgy_A Plasmid segregation pro 91.3 0.36 1.2E-05 49.5 7.5 69 485-559 247-319 (320)
83 4g9i_A Hydrogenase maturation 90.7 0.44 1.5E-05 54.8 8.1 75 492-567 684-765 (772)
84 3eno_A Putative O-sialoglycopr 89.8 0.5 1.7E-05 48.9 6.9 79 52-132 3-82 (334)
85 3hm8_A Hexokinase-3; glucose, 87.9 1.2 4.1E-05 47.7 8.5 64 51-119 55-120 (445)
86 3ven_A O-carbamoyltransferase 87.1 1.4 4.9E-05 48.7 8.7 79 483-565 280-361 (576)
87 3f9m_A Glucokinase; hexokinase 87.0 0.92 3.1E-05 49.0 6.9 66 52-119 74-144 (470)
88 1vhx_A Putative holliday junct 86.5 1.9 6.4E-05 39.1 7.7 24 56-79 4-27 (150)
89 3nuw_A 2-OXO-3-deoxygalactonat 83.6 0.93 3.2E-05 45.8 4.6 64 492-558 226-289 (295)
90 3cet_A Conserved archaeal prot 83.5 0.95 3.2E-05 46.5 4.7 68 484-558 246-321 (334)
91 3t69_A Putative 2-dehydro-3-de 83.2 1 3.5E-05 46.3 4.8 70 492-564 238-307 (330)
92 3en9_A Glycoprotease, O-sialog 82.8 3.4 0.00011 45.5 9.2 78 52-132 3-81 (540)
93 4apw_A ALP12; actin-like prote 81.7 3.8 0.00013 41.9 8.6 69 490-561 254-324 (329)
94 1t6c_A Exopolyphosphatase; alp 80.4 2.5 8.6E-05 43.2 6.6 21 56-76 13-34 (315)
95 3mdq_A Exopolyphosphatase; str 80.0 3.6 0.00012 42.0 7.6 74 52-131 2-84 (315)
96 2ews_A Pantothenate kinase; PA 79.3 1.3 4.4E-05 44.8 3.8 26 55-81 20-45 (287)
97 3bzc_A TEX; helix-turn-helix, 77.7 2.9 0.0001 48.0 6.6 65 52-129 326-391 (785)
98 2e2o_A Hexokinase; acetate and 76.4 4.4 0.00015 40.5 7.0 70 492-562 218-288 (299)
99 4gni_A Putative heat shock pro 76.2 1.2 4E-05 47.1 2.7 25 51-77 10-34 (409)
100 2f9w_A Pantothenate kinase; CO 75.9 4.9 0.00017 40.1 7.0 58 492-558 210-267 (271)
101 4ijn_A Acetate kinase, acetoki 75.6 7.3 0.00025 40.9 8.4 47 491-537 300-347 (398)
102 1nbw_A Glycerol dehydratase re 75.5 4 0.00014 44.7 6.6 71 472-544 505-581 (607)
103 3en9_A Glycoprotease, O-sialog 74.3 9.2 0.00031 42.0 9.4 75 491-567 226-308 (540)
104 3r9p_A ACKA; ssgcid, seattle s 73.7 8.9 0.0003 40.1 8.4 46 491-537 291-338 (391)
105 3sk3_A Acetate kinase, acetoki 73.6 3.6 0.00012 43.5 5.5 46 492-537 316-363 (415)
106 3r6m_A YEAZ, resuscitation pro 72.6 9.5 0.00033 36.5 7.9 63 56-132 3-65 (213)
107 2fsj_A Hypothetical protein TA 72.5 3 0.0001 43.1 4.7 67 492-560 273-343 (346)
108 3cqy_A Anhydro-N-acetylmuramic 71.2 7.2 0.00025 40.6 7.1 82 482-570 264-352 (370)
109 1u6z_A Exopolyphosphatase; alp 69.7 8.7 0.0003 42.0 7.8 75 54-131 10-91 (513)
110 4htl_A Beta-glucoside kinase; 68.3 13 0.00043 37.3 8.1 71 492-563 216-293 (297)
111 3r8e_A Hypothetical sugar kina 67.2 12 0.0004 38.0 7.7 69 492-561 239-319 (321)
112 2ch5_A NAGK protein; transfera 66.8 15 0.00052 37.3 8.6 72 492-564 236-327 (347)
113 3cer_A Possible exopolyphospha 66.6 5.9 0.0002 40.9 5.3 20 55-74 16-35 (343)
114 2gel_A Putative GRAM negative 65.4 12 0.0004 36.3 6.9 63 56-132 2-64 (231)
115 3hi0_A Putative exopolyphospha 64.6 15 0.00052 39.9 8.4 72 55-131 15-95 (508)
116 1yuw_A Heat shock cognate 71 k 64.3 3 0.0001 46.1 2.7 23 52-74 1-23 (554)
117 2gup_A ROK family protein; sug 63.2 21 0.00072 35.2 8.6 69 492-561 206-287 (292)
118 2aa4_A Mannac kinase, putative 62.4 13 0.00044 36.8 6.8 68 492-560 212-287 (289)
119 2d0o_A DIOL dehydratase-reacti 62.2 31 0.0011 37.7 9.9 72 472-545 503-580 (610)
120 3qfu_A 78 kDa glucose-regulate 61.3 3.7 0.00013 42.7 2.6 22 55-77 18-39 (394)
121 2yhw_A Bifunctional UDP-N-acet 61.0 31 0.001 35.0 9.6 68 492-562 263-339 (343)
122 3qbx_A Anhydro-N-acetylmuramic 60.9 9.2 0.00032 39.8 5.4 76 55-132 2-96 (371)
123 3cj1_A Ectonucleoside triphosp 60.8 6.3 0.00021 42.4 4.3 59 54-114 33-99 (456)
124 2e1z_A Propionate kinase; TDCD 60.7 20 0.00069 37.8 8.0 47 492-538 308-355 (415)
125 2fxu_A Alpha-actin-1, actin, a 60.6 6.2 0.00021 41.0 4.2 46 516-561 295-349 (375)
126 2qm1_A Glucokinase; alpha-beta 60.6 17 0.00059 36.5 7.5 69 492-561 241-321 (326)
127 3vgl_A Glucokinase; ROK family 60.5 15 0.00051 37.1 7.0 73 492-565 231-316 (321)
128 4ep4_A Crossover junction endo 60.2 42 0.0014 30.6 9.2 55 56-117 2-62 (166)
129 2a6a_A Hypothetical protein TM 59.2 10 0.00035 36.4 5.1 64 55-132 12-75 (218)
130 4db3_A Glcnac kinase, N-acetyl 59.2 15 0.0005 37.3 6.7 68 492-560 248-325 (327)
131 4gib_A Beta-phosphoglucomutase 58.7 2.1 7.2E-05 41.5 0.2 22 58-79 9-38 (250)
132 1dkg_D Molecular chaperone DNA 55.7 4 0.00014 42.4 1.7 21 56-77 3-23 (383)
133 1sz2_A Glucokinase, glucose ki 55.5 23 0.00077 35.9 7.4 50 514-563 264-328 (332)
134 3psf_A Transcription elongatio 55.0 9 0.00031 45.3 4.6 64 55-131 519-588 (1030)
135 1saz_A Probable butyrate kinas 53.9 28 0.00097 36.1 7.9 71 491-561 271-348 (381)
136 2zgy_A Plasmid segregation pro 50.9 9.2 0.00031 38.7 3.5 23 57-79 2-24 (320)
137 2yhx_A Hexokinase B; transfera 50.7 47 0.0016 35.5 9.1 52 512-563 381-444 (457)
138 2d0o_A DIOL dehydratase-reacti 50.1 22 0.00075 38.9 6.3 68 55-127 2-71 (610)
139 3aap_A Ectonucleoside triphosp 49.6 39 0.0013 34.8 8.0 19 55-73 3-21 (353)
140 2hoe_A N-acetylglucosamine kin 49.6 40 0.0014 34.8 8.2 69 492-561 293-371 (380)
141 1hjr_A Holliday junction resol 49.2 68 0.0023 28.9 8.7 54 56-117 2-58 (158)
142 4b9q_A Chaperone protein DNAK; 48.8 7.8 0.00027 43.2 2.7 18 56-73 3-20 (605)
143 3psi_A Transcription elongatio 48.5 30 0.001 41.6 7.8 64 55-131 516-585 (1219)
144 3htv_A D-allose kinase, alloki 47.3 65 0.0022 32.2 9.2 66 492-562 222-300 (310)
145 3i33_A Heat shock-related 70 k 46.6 7.8 0.00027 40.5 2.2 21 56-77 24-44 (404)
146 3o8m_A Hexokinase; rnaseh-like 46.6 36 0.0012 36.7 7.4 82 481-563 372-471 (485)
147 1xho_A Chorismate mutase; sout 46.4 20 0.00069 31.8 4.3 37 96-132 43-79 (148)
148 1zbs_A Hypothetical protein PG 46.2 22 0.00076 35.2 5.4 70 491-565 213-284 (291)
149 3epq_A Putative fructokinase; 44.8 42 0.0014 33.5 7.3 53 299-368 89-143 (302)
150 3vov_A Glucokinase, hexokinase 43.5 45 0.0015 33.2 7.3 70 492-562 216-296 (302)
151 1dbf_A Protein (chorismate mut 42.6 25 0.00084 30.6 4.2 37 96-132 14-50 (127)
152 3js6_A Uncharacterized PARM pr 41.9 23 0.00079 36.5 4.8 71 489-562 265-337 (355)
153 1nbw_A Glycerol dehydratase re 41.3 22 0.00075 39.0 4.6 64 55-125 2-68 (607)
154 2v7y_A Chaperone protein DNAK; 41.1 13 0.00044 40.4 2.9 19 56-74 3-21 (509)
155 2ap1_A Putative regulator prot 40.5 30 0.001 34.8 5.4 55 299-368 112-166 (327)
156 1ufy_A Chorismate mutase; shik 40.5 31 0.0011 29.8 4.5 37 96-132 13-50 (122)
157 3zx3_A Ectonucleoside triphosp 40.3 25 0.00086 37.6 4.9 60 54-115 33-100 (452)
158 3khy_A Propionate kinase; csgi 39.5 32 0.0011 35.8 5.3 46 491-537 290-337 (384)
159 1z6r_A MLC protein; transcript 38.1 61 0.0021 33.6 7.6 68 492-560 313-392 (406)
160 2q2r_A Glucokinase 1, putative 37.7 48 0.0017 34.0 6.6 69 492-561 283-371 (373)
161 1zc6_A Probable N-acetylglucos 37.3 23 0.00079 35.3 3.9 63 491-561 229-293 (305)
162 3d2f_A Heat shock protein homo 36.9 14 0.00049 41.7 2.5 18 57-74 4-21 (675)
163 1z05_A Transcriptional regulat 36.7 70 0.0024 33.5 7.8 69 492-562 336-416 (429)
164 4h0p_A Acetate kinase; askha ( 36.5 34 0.0012 36.1 5.1 49 491-539 323-378 (438)
165 2kho_A Heat shock protein 70; 35.3 15 0.00051 40.9 2.2 18 56-73 3-20 (605)
166 1iv0_A Hypothetical protein; r 34.6 44 0.0015 27.6 4.5 21 57-77 3-23 (98)
167 1jce_A ROD shape-determining p 34.4 16 0.00056 37.0 2.2 20 56-76 4-23 (344)
168 1g99_A Acetate kinase; alpha/b 30.9 45 0.0015 35.0 4.9 46 492-538 300-347 (408)
169 2fsj_A Hypothetical protein TA 30.5 21 0.00073 36.5 2.3 22 56-79 22-43 (346)
170 1zxo_A Conserved hypothetical 29.9 12 0.00041 37.3 0.3 63 492-560 212-277 (291)
171 2iir_A Acetate kinase; transfe 28.2 44 0.0015 35.0 4.2 47 492-539 300-348 (403)
172 1bdg_A Hexokinase; phosphotran 28.2 85 0.0029 33.4 6.6 47 517-563 395-448 (451)
173 3cet_A Conserved archaeal prot 27.6 1.1E+02 0.0038 31.2 6.9 32 57-89 2-33 (334)
174 2h3g_X Biosynthetic protein; p 27.2 1.8E+02 0.006 28.5 8.3 63 57-131 2-64 (268)
175 1woq_A Inorganic polyphosphate 26.8 71 0.0024 30.9 5.4 46 514-561 214-261 (267)
176 4apw_A ALP12; actin-like prote 26.6 29 0.00098 35.3 2.4 22 51-72 3-24 (329)
177 1k8k_A ARP3, actin-like protei 26.5 21 0.00071 37.5 1.4 47 515-561 316-387 (418)
178 2nu8_B SCS-beta, succinyl-COA 24.8 1.6E+02 0.0054 30.6 7.8 66 514-579 310-384 (388)
179 3mdq_A Exopolyphosphatase; str 23.4 84 0.0029 31.6 5.3 30 56-86 132-161 (315)
180 1eik_A RNA polymerase subunit 23.3 67 0.0023 25.4 3.4 33 265-313 23-55 (77)
181 2fp4_B Succinyl-COA ligase [GD 23.0 2E+02 0.007 29.8 8.3 66 515-580 318-392 (395)
182 4h0o_A Acetate kinase; askha ( 22.1 83 0.0028 32.9 4.8 47 491-538 303-351 (404)
183 3f9m_A Glucokinase; hexokinase 21.9 68 0.0023 34.4 4.3 84 481-565 364-464 (470)
184 1dw0_A Cytochrome C; asparagin 21.8 26 0.0009 29.8 0.8 33 193-225 78-111 (112)
185 1nu0_A Hypothetical protein YQ 21.6 75 0.0026 27.9 3.9 23 56-78 4-26 (138)
186 3hm8_A Hexokinase-3; glucose, 20.5 1E+02 0.0036 32.7 5.4 83 480-563 339-438 (445)
No 1
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=100.00 E-value=1.5e-91 Score=790.31 Aligned_cols=532 Identities=47% Similarity=0.818 Sum_probs=451.5
Q ss_pred CcEEEEEecCCcccEEEEEcCCCcEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~-~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
++|+||||+|||++|++|+|++|+++++.+.+++.+. ++||+||||++||+++++++++++++.+++..+|.+|||++|
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 83 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQVKGLGFDAT 83 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred CcEEEEEEECcccEEEEEECCCCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCHhHEEEEEEcCC
Confidence 4699999999999999999999999999999998654 899999999999999999999999988877889999999999
Q ss_pred ceeEEEcCCCCceeeccCCCCCcceeEecccchHHHHHHHhcCChhHHHHhCCCCCCCChHHHHHHHHHhchhhHHhhce
Q 006707 133 CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFR 212 (634)
Q Consensus 133 ~~~V~~d~~G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~ 212 (634)
|++|+||++|+|+....+..+.+|+|+|+|+|+.++++++++..++++++||+++++.|+++||+|+++|+||+|+++.+
T Consensus 84 ~~~v~~D~~G~pl~~~~~~~~~~~ai~W~D~Ra~~~~~~l~~~~~~~~~~tG~~~~~~~~~~Kl~Wl~~~~Pe~~~~~~~ 163 (554)
T 3l0q_A 84 CSLVVLDKEGNPLTVSPSGRNEQNVIVWMDHRAITQAERINATKHPVLEFVGGVISPEMQTPKLLWLKQHMPNTWSNVGH 163 (554)
T ss_dssp SCEEEEETTSCBCCCSTTCCTTCCEECTTCCTTHHHHHHHHHHTCGGGGGBTTCCCTTSHHHHHHHHHHHCHHHHHHEEE
T ss_pred CceEEECCCCCEeeccCCCCCCCCcEEecccchHHHHHHHHHhHHHHHHHhCCCCChhhHHHHHHHHHHhChHHHHHhce
Confidence 99999999999994222234456999999999999999998876779999999999999999999999999999999999
Q ss_pred eecchhHHHhhhhCCCccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCcccccccccCcccccCC
Q 006707 213 WMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVAFPG 292 (634)
Q Consensus 213 ~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~lp~l~~~~~~~g 292 (634)
|++++|||.|+|||+...+++|. |+++ .+|+++++||+++|+.+||++.+...+.+|++++++++
T Consensus 164 ~~~~~dyl~~~LTG~~~~s~as~-----------t~~~----~~d~~~~~W~~~ll~~~gi~~~~~~~~~~Lp~~i~~~~ 228 (554)
T 3l0q_A 164 LFDLPDFLTWRATKDETRSLCST-----------VCKW----TYLGHEDRWDPSYFKLVGLADLLDNNAAKIGATVKPMG 228 (554)
T ss_dssp EEEHHHHHHHHHHSCCCEEHHHH-----------HHHS----CCBTTTTBCCHHHHHHHTCGGGGHHHHTTTCSCEECTT
T ss_pred EEcHHHHHHHHHhCCccccccch-----------hhcc----ccccccCCCCHHHHHHcCCccccchhHHhCCCcccCCc
Confidence 99999999999999986554443 3333 36889999999999999998632100003333688999
Q ss_pred Cccc-CCCCHHHHHHcCCCCCCcEEEccchhhhhhhcccccc-CcccchhchhhhhhccceEEEEecccceeeeeeCccc
Q 006707 293 HPLG-SGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESV-PESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRNKL 370 (634)
Q Consensus 293 ~~iG-~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~-~~g~~~~~~~~~g~~~g~~~is~GTs~~~~~~~~~p~ 370 (634)
+++| + |++++|+++||++||||++|++|++|+++|+.|.. ++| +. +..++++.+++|||+++++++++|.
T Consensus 229 ~~~G~~-lt~~~A~~~GL~~g~pV~~g~gD~~aa~lg~~G~~~~~G---~~----~~~~~~~~~~~GTs~~~~~~~~~~~ 300 (554)
T 3l0q_A 229 APLGHG-LSQRAASEMGLIPGTAVSVSIIDAHAGTIGILGASGVTG---EN----ANFDRRIALIGGTSTAHMAMSRSAH 300 (554)
T ss_dssp CBCTTS-SCHHHHHHHTCCTTCEEBCCEEHHHHHHHHHTTCCCTTS---CC----CCTTTEEEEECSSSEEEEEEESSCC
T ss_pred CeeCcc-cCHHHHHHhCCCCCCeEEEeChHHHhHHhhccccccCCC---cc----ccccceEEEEecchheeeeecCCcc
Confidence 9999 9 99999999999999999999999999999853433 321 00 0001278899999999999999988
Q ss_pred ccCcccccccccccCCeeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhhcCCCCccCCCC
Q 006707 371 FIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAALTE 450 (634)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~ 450 (634)
.+++.+.+++++..++.|+.+++++++|.+++||++.+....++.+.++..+.+.|+.|+++++++++.. |..+.+++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~ 378 (554)
T 3l0q_A 301 FISGIWGPYYSAILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGEP--ENIAFLTN 378 (554)
T ss_dssp CCTTSEEEEETSSSTTCEEEEEEESCSHHHHHHHHHTSTTHHHHHHHHHHTTCCHHHHHHHHHHHHHSSG--GGGGGGGT
T ss_pred ccCCcceeecccccCCceEecchhhhhHHHHHHHHHhcccchHHHHHHHhcCCCHHHHHHHHHHhcCCCC--CccccccC
Confidence 8787776556667789999999999999999999998754333444455556789999999888765321 00011379
Q ss_pred cEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHH
Q 006707 451 DIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLF 530 (634)
Q Consensus 451 gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~ 530 (634)
|++|+|||+|+|+|+||+++||+|+|++.+|++.|++|++||++||++|++|++++.|++.|.++++|+++||++||++|
T Consensus 379 gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~ 458 (554)
T 3l0q_A 379 DIHMLPYFHGNRSPRANPNLTGIITGLKLSTTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIF 458 (554)
T ss_dssp TCCEECCTTCBCSSSCBTTCCCEECSCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHH
T ss_pred ceEEcccccCCCCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHH
Confidence 99999999999999999999999999999999999887799999999999999999999888899999999999999999
Q ss_pred HHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCCCHHHHHHHhhhcCcEEee-chhhHHhhhHHhccccchhhhhhh
Q 006707 531 LQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVCMT-VGFYLLTYLYLVYITRDKEAKICQ 609 (634)
Q Consensus 531 ~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~~~~e~~~~~~~~~~~~~P-~~~~~~~y~~~~~~~~~~~~~~~~ 609 (634)
+||+|||||+||++++..|++|+|||++|++++|.|+|++|+++++++..++|+| .+...+.|..++. +|+++.+
T Consensus 459 ~Qi~ADv~g~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~~Y~~~y~----~y~~l~~ 534 (554)
T 3l0q_A 459 VQEHANATGCAMLLPEESEAMLLGSAMMGTVAAGVFESLPEAMAAMSRIGKTVTPQTNKIKAYYDRKYR----VFHQMYH 534 (554)
T ss_dssp HHHHHHHHCCEEEEESCSCHHHHHHHHHHHHHTTSSSSHHHHHHHHCCEEEEECCCCHHHHHHHHHHHH----HHHHHHH
T ss_pred HHHHHHhhCCeEEecCCCcchHHHHHHHHHHHcCCcCCHHHHHHHhcCCCcEEeCCCHHHHHHHHHHHH----HHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 8877777777443 4555555
Q ss_pred hHHhh
Q 006707 610 LILCF 614 (634)
Q Consensus 610 ~~~~~ 614 (634)
.+...
T Consensus 535 ~~~~~ 539 (554)
T 3l0q_A 535 DHMRY 539 (554)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 2
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=100.00 E-value=5.8e-90 Score=768.55 Aligned_cols=482 Identities=20% Similarity=0.293 Sum_probs=422.8
Q ss_pred CCCcEEEEEecCCcccEEEEEcCCCcEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEec
Q 006707 52 RSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (634)
Q Consensus 52 m~~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~-~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis 130 (634)
|+++|+||||+|||++|++++|++|+++++.+++++.+. ++||+||||++||+++++++++++++.+ .+|.+|||+
T Consensus 1 M~m~~~lgIDiGtts~K~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~---~~I~~Igis 77 (504)
T 3ll3_A 1 MSLKYIIGMDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID---GKIAAISWS 77 (504)
T ss_dssp -CCEEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS---SEEEEEEEE
T ss_pred CCCCEEEEEEecCCceEEEEEcCCCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC---CCeEEEEEE
Confidence 556799999999999999999999999999999998654 9999999999999999999999988753 789999999
Q ss_pred CC-ceeEEEcCCCCceeeccCCCCCcceeEecccchHHHHHHHhcCC--hhHHHHhCCCCCCCChHHHHHHHHHhchhhH
Q 006707 131 AT-CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESW 207 (634)
Q Consensus 131 ~~-~~~V~~d~~G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~ 207 (634)
+| |++|+||++|+|+ +|+|+|+|+|+.++++++++.. ++++++||+++++.++++||+|+++|+||+|
T Consensus 78 ~q~~~~v~~D~~G~pl---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~ 148 (504)
T 3ll3_A 78 SQMHSLIGLGSDDELL---------TNSITWADNCAKSIVQDAKNRGFAQQIYRKTGMPMHPMAPIYKLLWLKNKKTEVF 148 (504)
T ss_dssp ECSSCBEEECTTSCBS---------SCEECTTCCTTHHHHHHHHHHTHHHHHHHHHCCCSCTTSHHHHHHHHHHHCHHHH
T ss_pred CCCCcEEEECCCCCCc---------ccceeCCccCHHHHHHHHHhccCHHHHHHHHCCCCCcccHHHHHHHHHHcChHHH
Confidence 98 9999999999999 8999999999999999999875 6799999999999999999999999999999
Q ss_pred HhhceeecchhHHHhhhhCCCccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCcccccccccCcc
Q 006707 208 SMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRS 287 (634)
Q Consensus 208 ~~~~~~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~lp~l~~~ 287 (634)
+++.+|++++|||.|+|||+.. +|.| +||+|+| ||+++++||+++|+.+||+.. +|| +
T Consensus 149 ~~~~~~~~~~dyl~~~LTG~~~-~d~s--------~As~t~l------~d~~~~~W~~~ll~~~gi~~~---~LP----~ 206 (504)
T 3ll3_A 149 SQAQKWIGIKEYIIFRLTGKLV-TDTT--------MAAGTGI------LNLKTLTWDQELLDILKIKKE---QLP----K 206 (504)
T ss_dssp HHCCEEECHHHHHHHHHHSCCE-EEHH--------HHTTTTC------BCTTTSSBCHHHHHHHTCCGG---GSC----E
T ss_pred HHHhheeCHHHHHHHHHhCCcc-cchh--------HhhcccC------eeCCCCCcCHHHHHHcCCCHH---HCC----C
Confidence 9999999999999999999875 4555 3556664 699999999999999999974 457 7
Q ss_pred cccCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccceeeeeeC
Q 006707 288 VAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSR 367 (634)
Q Consensus 288 ~~~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~~~~~~~~ 367 (634)
++++++++|+ |++++|+++||++||||++|+||++|+++|+ +..+ +|++++++|||++++++++
T Consensus 207 i~~~~~~~G~-l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~~~~~~~~ 270 (504)
T 3ll3_A 207 IAQPTKVIFP-IKTEYVKKLGIDSDTKIILGASDGYLSTIGV-NAID--------------SDHCALNVGTSGAIRTIVD 270 (504)
T ss_dssp EECTTCEECC-CCHHHHHHHTCCTTCEEEEEEEHHHHHHHTT-TCCS--------------TTEEEEEESSSEEEEEEES
T ss_pred eeCCcceeec-cCHHHHHhcCCCcCCCEEEEccHHHHHHHhC-CCCC--------------CCcEEEEechhhhheeeCC
Confidence 8899999998 9999999999999999999999999999998 5554 4799999999999999999
Q ss_pred cccccCcccccccccccCCeeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhhcCCCCccC
Q 006707 368 NKLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAA 447 (634)
Q Consensus 368 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~p~~~~ 447 (634)
+|..++... .+++...++.|+.+++++++|.+++|+++.+.... ..++.+.+++++ +|+
T Consensus 271 ~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~-----------~~~~~~~~~a~~---------~~~ 329 (504)
T 3ll3_A 271 QPKIDPSAS-YFCYPADKTHYLLGGPVNNGGIVFNWARQTLFDAD-----------ETPQDFLDVAQT---------APA 329 (504)
T ss_dssp SCCCCTTCC-SEEEEEETTEEEEEEEESCSHHHHHHHHHHHTCTT-----------CCHHHHHHHHHT---------SCT
T ss_pred CcccCCCCc-eEEEEeCCCeEEEEeehhhHHHHHHHHHHHhccch-----------hHHHHHHHHHhc---------CCC
Confidence 987766322 23433346789999999999999999999875321 122333334444 447
Q ss_pred CCCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCC
Q 006707 448 LTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN 527 (634)
Q Consensus 448 g~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s 527 (634)
|++|++|+|||+|+|+|+||+++||+|+|++..|++.| ++||++||++|.+|++++.|++.+.++++|+++||++||
T Consensus 330 g~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~---l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s 406 (504)
T 3ll3_A 330 GSRNLIFLPYLGGERAPIWDANARGSFVGLTRMHQKPE---MARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKS 406 (504)
T ss_dssp TGGGCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHH---HHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCS
T ss_pred CCCCeEEecCccCCCCCCCCCccCeEEECCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcC
Confidence 99999999999999999999999999999999999988 567999999999999999999888889999999999999
Q ss_pred HHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCCCHHHHHHHhhhcCcEEeechhhHHhhhHHhccccchhhhh
Q 006707 528 PLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVCMTVGFYLLTYLYLVYITRDKEAKI 607 (634)
Q Consensus 528 ~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~~~~e~~~~~~~~~~~~~P~~~~~~~y~~~~~~~~~~~~~~ 607 (634)
++|+||+||+||+||++++..|++|+|||++|++++|.|+|+++ ++++++..++|+|.+...+.|..++. +|+++
T Consensus 407 ~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~-~~~~~~~~~~~~P~~~~~~~Y~~~y~----~y~~l 481 (504)
T 3ll3_A 407 DFVRQLCANIFNVPIVTMKEQQSGTLAAMFLARQALGLNQDLSE-IGQFAQADKVYFPNPKEAATYQKLFP----LYCEI 481 (504)
T ss_dssp HHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTSCCSGGG-GGGTSCEEEEECCCHHHHHHHHHHHH----HHHHH
T ss_pred HHHHHHHHHhhCCeEEecCCCCchhHHHHHHHHHHcCccCCHHH-HHHhcCCCeEEccCHHHHHHHHHHHH----HHHHH
Confidence 99999999999999999999999999999999999999999987 57788889999998877777776544 34444
Q ss_pred hhhHH
Q 006707 608 CQLIL 612 (634)
Q Consensus 608 ~~~~~ 612 (634)
.+.+.
T Consensus 482 ~~~l~ 486 (504)
T 3ll3_A 482 RNALA 486 (504)
T ss_dssp HHHHG
T ss_pred HHHHH
Confidence 44443
No 3
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=100.00 E-value=1.2e-89 Score=766.61 Aligned_cols=483 Identities=19% Similarity=0.235 Sum_probs=426.3
Q ss_pred CcEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~-~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
++|+||||+|||++|++++|++|+++++.+++++.. +.+||+||||++||+++++++++++++.+++..+|.+|||++|
T Consensus 6 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Igis~~ 85 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESDWRPGGICVTGM 85 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGGCCEEEEEEEEC
T ss_pred CCEEEEEEecCcceEEEEECCCCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCChhheEEEEEECC
Confidence 469999999999999999999999999999999865 4899999999999999999999999887777789999999998
Q ss_pred -ceeEEEcCCCCceeeccCCCCCcceeEecccchHHHHHHHhcCC--hhHHHHhCCCCCCCChHHHHHHHHHhchhhHHh
Q 006707 133 -CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSM 209 (634)
Q Consensus 133 -~~~V~~d~~G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~ 209 (634)
|++|+||++|+|+ +|+|+|+|+|+.++++++++.. ++++++||+++++.|+++||+|+++|+||+|++
T Consensus 86 ~~~~v~~D~~G~~l---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 156 (508)
T 3ifr_A 86 LPAVVLLDDRGAVL---------RPSIQQSDGRCGDEVAELRAEVDSEAFLARTGNGVTQQLVTAKLRWIERHEPAVFGA 156 (508)
T ss_dssp SSCBEEECTTSCBC---------SCEECTTCCCCHHHHHHHHHHSCHHHHHHHHSSCSSTTSHHHHHHHHHHHCHHHHHT
T ss_pred CCcEEEECCCCCCc---------ccceeccccChHHHHHHHHhhccHHHHHHHHCCCCChhhHHHHHHHHHHcCHHHHHH
Confidence 9999999999999 8999999999999999999875 568999999999999999999999999999999
Q ss_pred hceeecchhHHHhhhhCCCccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCcccccccccCcccc
Q 006707 210 VFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVA 289 (634)
Q Consensus 210 ~~~~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~lp~l~~~~~ 289 (634)
+.+|++++|||.|+|||+.. +|.| +||+|++ ||+++++||+++|+.+|||.. +|| +++
T Consensus 157 ~~~~l~~~dyl~~~LTG~~~-~d~s--------~As~t~l------~d~~~~~W~~~ll~~~gi~~~---~LP----~i~ 214 (508)
T 3ifr_A 157 IATVCGSYDYINMLLTGERV-VDRN--------WALEGGF------IDLASGTVEADLVALAHIPPS---AVP----PAH 214 (508)
T ss_dssp CSEEECHHHHHHHHHHCCCC-EEHH--------HHHHHTC------EETTTTEECHHHHHTTTSCGG---GSC----CEE
T ss_pred HhhhcCchHHHHHHhcCCcc-ccHh--------HhhcccC------ccCccCCCCHHHHHHcCCCHH---HCC----CCc
Confidence 99999999999999999974 4555 4566664 589999999999999999974 457 688
Q ss_pred cCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccceeeeeeCcc
Q 006707 290 FPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRNK 369 (634)
Q Consensus 290 ~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~~~~~~~~~p 369 (634)
++++++|+ |++++|+++||++||||++|+||++|+++|+ ++.+ +|++++++|||+++++.+++|
T Consensus 215 ~~~~~~G~-l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~~~~~~~~~~ 278 (508)
T 3ifr_A 215 PTHRVLGA-VTAEAAALTGLPTGLPVYGGAADHIASALAA-GITR--------------PGDVLLKFGGAGDIIVASATA 278 (508)
T ss_dssp CTTSEEEE-CCHHHHHHHCCCTTCEEECCEEHHHHHHHHT-TCCS--------------TTEEEEEESSSEEEEECBSCC
T ss_pred CCCCeeec-cCHHHHHHhCCCCCCeEEEECchHHHHHHhC-CCCC--------------CCcEEEEechhhhheeeCCCc
Confidence 99999998 9999999999999999999999999999998 5554 478999999999999999998
Q ss_pred cccCcccccccccccCCeeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCC-HHHHHHHHHHhhhhhcCCCCccCC
Q 006707 370 LFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVS-LFELLNGTLESMIHERNSPFVAAL 448 (634)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~-~~~~l~~~~~~~~~~~~~p~~~~g 448 (634)
..++..+ .+ ++..++.|+.+++++++|.+++|+++.+.. .+.+ .|++|++++++ +|+|
T Consensus 279 ~~~~~~~-~~-~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~----------~~~~~~~~~l~~~a~~---------~~~~ 337 (508)
T 3ifr_A 279 KSDPRLY-LD-YHLVPGLYAPNGCMAATGSALNWLAKLLAP----------EAGEAAHAQLDALAAE---------VPAG 337 (508)
T ss_dssp CCBTTBB-CC-BCSSTTCBCCEEEESSSHHHHHHHHHHHST----------TCTTHHHHHHHHHHHT---------SCTT
T ss_pred ccCCCcc-ee-eeecCCceEEechhhhhHHHHHHHHHHHhh----------cCCCCCHHHHHHHHhc---------CCCC
Confidence 7776632 33 345688999999999999999999998741 0111 58888888876 3479
Q ss_pred CCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCH
Q 006707 449 TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNP 528 (634)
Q Consensus 449 ~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~ 528 (634)
++|++|+|||+|+|+|+||+++||.|+|++..|++.| ++||++||++|.+|.+++.|++.|.++++|+++||++||+
T Consensus 338 ~~gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~---l~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GGga~s~ 414 (508)
T 3ifr_A 338 ADGLVCLPYFLGEKTPIHDPFASGTFTGLSLSHTRGH---LWRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTRSR 414 (508)
T ss_dssp GGGCEEECCTTCCC----CCCCCCEEESCCTTCCHHH---HHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEESGGGGCH
T ss_pred CCCeEEecCCCCCCCCCCCCCcCEEEECCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcccCH
Confidence 9999999999999999999999999999999999988 5679999999999999999998888999999999999999
Q ss_pred HHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCCCHHHHHHHhhhcCcEEeechhhHHhhhHHhccccchhhhhh
Q 006707 529 LFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVCMTVGFYLLTYLYLVYITRDKEAKIC 608 (634)
Q Consensus 529 ~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~~~~e~~~~~~~~~~~~~P~~~~~~~y~~~~~~~~~~~~~~~ 608 (634)
+|+||+||++|+||++++..|++|+|||++|++++|.|+|++|+. ++++..++|+|.+...+.|..++. +++++.
T Consensus 415 ~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~-~~~~~~~~~~P~~~~~~~y~~~y~----~~~~~~ 489 (508)
T 3ifr_A 415 VWMGIMADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWDDVT-ALVRTGEKITPDPAKAEVYDRLYR----DFSALY 489 (508)
T ss_dssp HHHHHHHHHHTSCEEEEECCSTHHHHHHHHHHHHTCSSCCGGGGG-GGSEEEEEECCCGGGHHHHHHHHH----HHHHHH
T ss_pred HHHHHHHHHhCCeEEecCCCCchHHHHHHHHHHHhCCCCCHHHHH-hhcCCCeEECcCHHHHHHHHHHHH----HHHHHH
Confidence 999999999999999999999999999999999999999999874 488889999998877777776444 345555
Q ss_pred hhHH
Q 006707 609 QLIL 612 (634)
Q Consensus 609 ~~~~ 612 (634)
+.+.
T Consensus 490 ~~~~ 493 (508)
T 3ifr_A 490 ATLH 493 (508)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5444
No 4
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=100.00 E-value=1.7e-89 Score=766.03 Aligned_cols=473 Identities=20% Similarity=0.247 Sum_probs=419.5
Q ss_pred CcEEEEEecCCcccEEEEEcCCCcEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~-~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
|+|+||||+|||++|++++|.+|+++++.+++++.+. .+||+||||++||+++.+++++++ +.+++..+|.+|||++|
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~~~~I~~Igis~q 82 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSGQ 82 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCCGGGEEEEEEEEC
T ss_pred ccEEEEEEeCCCceEEEEECCCCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCChhHeEEEEEecc
Confidence 4699999999999999999999999999999998654 899999999999999999999999 76777789999999998
Q ss_pred -ceeEEEcCCCCceeeccCCCCCcceeEecccchHHHHHHHhcCC--hhHHHHhCCCCCCCChHHHHHHHHHhchhhHHh
Q 006707 133 -CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSM 209 (634)
Q Consensus 133 -~~~V~~d~~G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~ 209 (634)
|++|+||++|+|+ +|+|+|+|+|+.++++++++.. ++++++||+++++.++++||+|+++|+||+|++
T Consensus 83 ~~~~v~~D~~G~pl---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 153 (511)
T 3hz6_A 83 MQNFLPLDQDHEPL---------HRAVLYSDKRPLKEAEEINARHGADNLWSALENPMTAASILPKLVFWRASFPQAFGR 153 (511)
T ss_dssp CSCBEEECTTSCBS---------SCEECTTCCCCHHHHHHHHHHHCHHHHHHHHSSCCSTTSHHHHHHHHHHHCHHHHTT
T ss_pred cccEEEECCCcCCC---------cCceecCCCCHHHHHHHHHhccCHHHHHHHHCCCCCchhHHHHHHHHHHhChHHHHH
Confidence 9999999999999 8999999999999999998875 679999999999999999999999999999999
Q ss_pred hceeec-chhHHHhhhhCCCccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCcccccccccCccc
Q 006707 210 VFRWMD-LSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSV 288 (634)
Q Consensus 210 ~~~~~~-~~dyl~~~LTG~~~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~lp~l~~~~ 288 (634)
+.+|++ ++|||.|+|||+.. +|.| +||+|++ ||+++++||+++|+.+||+.. +|| ++
T Consensus 154 ~~~~l~~~~dyl~~~LTG~~~-~d~s--------~As~t~l------~d~~~~~W~~~ll~~~gi~~~---~LP----~i 211 (511)
T 3hz6_A 154 LRHVVLGAKDYVVLRLTGRHA-TDRT--------NASTTGL------YRPKDDAWHVELLADYGFSLD---LMP----RL 211 (511)
T ss_dssp CCEEECSHHHHHHHHHHSCCE-ECHH--------HHHHTTC------EETTTTEECHHHHHHTTCCGG---GSC----EE
T ss_pred HHHHhcCcHHHHHHHHhCCce-eeHh--------Hhhcccc------eeCCCCCcCHHHHHHhCCCHH---HCC----CC
Confidence 999999 99999999999874 4555 4566664 589999999999999999973 357 78
Q ss_pred ccCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccceeeeeeC-
Q 006707 289 AFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSR- 367 (634)
Q Consensus 289 ~~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~~~~~~~~- 367 (634)
+++++++|+ |++++|+++||++||||++|+||++|+++|+ ++.+ +|++++++|||+++.+.++
T Consensus 212 ~~~~~~~G~-l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~~~~~~~~~ 275 (511)
T 3hz6_A 212 LEPGEQVGG-VSALAARQTGFVSGTPVLCGLGDAGAATLGV-GVLD--------------DEDAYLHLGTTGWLARLTQT 275 (511)
T ss_dssp CCTTSEEEE-CCHHHHHHHCCCTTCEEECCEEHHHHHHHHT-TCCS--------------TTCEEEEESSSEEEEEEEEC
T ss_pred cCCCCcccc-cCHHHHHhhCCCCCCeEEEECchHHHHHHhC-CCCC--------------CCcEEEEecchhhheeecCC
Confidence 899999998 9999999999999999999999999999998 5553 4789999999999999998
Q ss_pred ccccc-CcccccccccccCCeeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhhcCCCCcc
Q 006707 368 NKLFI-PGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVA 446 (634)
Q Consensus 368 ~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~p~~~ 446 (634)
+|..+ +......+++..++.|..+++++++|.+++|+++.+... ....|+++++++++. |
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~----------~~~~~~~l~~~a~~~---------~ 336 (511)
T 3hz6_A 276 DPVGDMPVGTIFRLAGIIAGKTLQVAPVLNAGNILQWALTLVGHR----------PGEDCAEYFHMAAAE---------V 336 (511)
T ss_dssp CCCCSCCSSCCEEECSSSTTEEEEEEEESSSHHHHHHHGGGGTCC----------TTSCSHHHHHHHHHH---------H
T ss_pred eecccCCCCceEEEEEecCCceEEEeehhhHHHHHHHHHHHhccc----------ccccHHHHHHHHHhC---------C
Confidence 88876 632222223456788777799999999999999987510 013578899888874 3
Q ss_pred CC---CCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecC
Q 006707 447 AL---TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGG 523 (634)
Q Consensus 447 ~g---~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG 523 (634)
+| ++|++|+|||+|+|+|+||+++||.|+|++..|++.| ++||++||++|++|++++.|++ |. +++|+++||
T Consensus 337 ~g~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~---l~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GG 411 (511)
T 3hz6_A 337 QGVTVPDGLLFVPYLHAERCPVELPAPRGALLGVTGATTRAQ---ILLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGG 411 (511)
T ss_dssp TTCCCCTTCEEEEESSCBCSSSCBSSCEEEEECCCTTCCHHH---HHHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESG
T ss_pred CCCCCCCCEEEeCCCCCCCCCCCCCccceEEEcCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCc
Confidence 68 9999999999999999999999999999999999988 5679999999999999999998 88 999999999
Q ss_pred CCCCHHHHHHHHHhhCCce-eccCCCChhhHHHHHHHHhhcCCCCCHHHHHHHh---hhcCcEEeechhhHHhhhHHhc
Q 006707 524 LAKNPLFLQQHADIIGCPI-ILPRENESVLLGAAILGAVAAKRYSSLIEAMKAM---NAAGQVCMTVGFYLLTYLYLVY 598 (634)
Q Consensus 524 ~a~s~~~~Qi~Advlg~pV-~~~~~~ea~alGAA~lA~~~~g~~~~~~e~~~~~---~~~~~~~~P~~~~~~~y~~~~~ 598 (634)
++||++|+||+||++|+|| +++...|++|+|||++|++++|.|+|++|+++++ ++..++|+|.+...+.|..++.
T Consensus 412 ga~s~~~~Qi~ADv~g~pV~~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~y~~~y~ 490 (511)
T 3hz6_A 412 GARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREADLREPASNILHPQPCDEGRRRRKFE 490 (511)
T ss_dssp GGGCHHHHHHHHHHHTCEEEECCCGGGHHHHHHHHHHHHHTTSCSCHHHHHHHHHTC---CCCBCCCCCCHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHCCeeEEecCCCCchHHHHHHHHHHHhCCcCCHHHHHHHhhccCCCCeEECcCHHHHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999999888999 8999999998776666666443
No 5
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=100.00 E-value=3e-87 Score=757.50 Aligned_cols=497 Identities=26% Similarity=0.428 Sum_probs=424.1
Q ss_pred CcEEEEEecCCcccEEEEEcC-CCcEEEEEEeeec-----cc-cC------CCccccCHHHHHHHHHHHHHHHHHHcCCC
Q 006707 54 RSVFLGVDVGTGSARAGLFDE-SGKLLGSASSPIQ-----IW-KE------GDCIEQSSTDIWHAICAAVDSACSLANVD 120 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~-~g~vl~~~~~~~~-----~~-~~------~g~~eqdp~~~~~a~~~~l~~~l~~~~~~ 120 (634)
++|+||||+|||++|++|+|. +|+++++.+++|+ .+ ++ +||+||||++||+++++++++++++.+++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~~~ 83 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESGVD 83 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC---C
T ss_pred CCEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCC
Confidence 469999999999999999997 9999999999997 32 34 99999999999999999999999988777
Q ss_pred CCCeEEEEecCC-ceeEEEcCCCCceeeccCC--CCCcceeEecccchHHHHHHHhcCC----hhHHHHhCCCCCCCChH
Q 006707 121 GEEVKGVGFAAT-CSLVAVDADGSPVSVSWNG--DSRRNIIVWMDHRAVKQAEKINSRN----SPVLQYCGGAVSPEMQP 193 (634)
Q Consensus 121 ~~~I~aIgis~~-~~~V~~d~~G~pl~~~~~~--~~~~~~i~W~D~Ra~~~~~~l~~~~----~~~~~~tG~~~~~~~~~ 193 (634)
..+|.+|||++| |++|+||++|+|+.+..++ .+..++|+|+|+|+.++++++++.. ++++++||+++++.|++
T Consensus 84 ~~~I~~Igis~q~~~~v~~D~~G~pl~~~~~~~~~p~~~ai~W~D~R~~~~~~~l~~~~~~~~~~~~~~tG~~~~~~~~~ 163 (572)
T 3jvp_A 84 ADDVIGIGVDFTACTMLPVDEEGQPLCLLAQYKDNPHSWVKLWKHHAAQDKANAINEMAEKRGEAFLPRYGGKISSEWMI 163 (572)
T ss_dssp CSCEEEEEEEECSSCEEEECTTSCBGGGSSSTTSSGGGSEECTTCCTTHHHHHHHHHHHHHHTCTTGGGGTTCCCSSSHH
T ss_pred hhHEEEEEEecCCCcEEEECCCCCCCccCccccccccccceecCccchHHHHHHHHHhccccHHHHHHHhCCCCCchhHH
Confidence 889999999998 9999999999999432111 1112289999999999999998752 56889999999999999
Q ss_pred HHHHHHHHhchhhHHhhceeecchhHHHhhhhCCCccccccccccccccccchhhhccccccCCCcCCCC-CHHHHHHcC
Q 006707 194 PKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGW-DDEFWEEIG 272 (634)
Q Consensus 194 ~kl~wl~~~~Pe~~~~~~~~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~W-s~~~L~~~g 272 (634)
+||+|+++|+||+|+++.+|++++|||.|+|||+.. ++.| +||+|++ || ++++| |+++|+.+|
T Consensus 164 ~kl~wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~-~d~s--------~As~t~l------~d-~~~~W~~~ell~~~g 227 (572)
T 3jvp_A 164 AKVWQILDEAEDVYNRTDQFLEATDWIVSQMTGKIV-KNSC--------TAGYKAI------WH-KREGYPSNEFFKALD 227 (572)
T ss_dssp HHHHHHHHHHHHHHHHCSEEEEHHHHHHHHHHSSCC-EEHH--------HHHHHSC------CB-TTTBSCCHHHHHTTC
T ss_pred HHHHHHHHhCHHHHHHhheEecHHHHHHHHhcCCce-eehh--------hccccce------eC-CCCCcCCHHHHHHhC
Confidence 999999999999999999999999999999999985 4444 3455654 68 89999 999999998
Q ss_pred CCCc-c-cccccccCcccccCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccc
Q 006707 273 LGDL-I-DGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICH 350 (634)
Q Consensus 273 i~~~-l-~~~lp~l~~~~~~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g 350 (634)
++.. + .++| +|+++++++++|+ |++++|+++||++|+||++|++|++|+++|+ ++.+ +|
T Consensus 228 ~~l~~i~~~~L---~p~i~~~~~~~G~-l~~~~A~~~GL~~g~pV~~g~~D~~aa~~g~-g~~~--------------~g 288 (572)
T 3jvp_A 228 PRLEHLTTTKL---RGDIVPLGERAGG-LLPEMAEKMGLNPGIAVAVGNVDAHAAVPAV-GVTT--------------PG 288 (572)
T ss_dssp GGGTTSTTTTT---CSCEECTTSEEEE-CCHHHHHHHTSCTTCEEECCEETTTTHHHHT-TCCS--------------SE
T ss_pred cccccCCHhHC---CCccCCcCccccc-cCHHHHHHhCCCCCCeEEEeCchHHHHHhhC-CCCC--------------CC
Confidence 4210 0 1122 2378999999998 9999999999999999999999999999998 5554 47
Q ss_pred eEEEEecccceeeeeeCcccccCcccccccccccCCeeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHH
Q 006707 351 RMVLVCGTSTCHMAVSRNKLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLN 430 (634)
Q Consensus 351 ~~~is~GTs~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~ 430 (634)
++.+++|||.++.++++++...++.+..+..+..++.|.+++++.++|.+++||++.+... +..+.++..+.+.|++|+
T Consensus 289 ~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~-~~~~~~~~~g~~~~~~l~ 367 (572)
T 3jvp_A 289 KLVMAMGTSICHMLLGEKEQEVEGMCGVVEDGIIPGYLGYEAGQSAVGDIFAWFVKHGVSA-ATFDEAQEKGVNVHALLE 367 (572)
T ss_dssp EEEEEESSSEEEEEEESSCCCCTTCSEEEETSSSTTSEEEEEEESCSHHHHHHHHHHTSBH-HHHHHHHHTTBCHHHHHH
T ss_pred cEEEEecchhheeeecCCCccCCCceeeccCccCCCcEEEeehhhhHHHHHHHHHHhccch-hhHHHHHhcCCCHHHHHH
Confidence 8999999999998888877655554433334456899999999999999999999998642 233334445677899999
Q ss_pred HHHHhhhhhcCCCCccCCCCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006707 431 GTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA 510 (634)
Q Consensus 431 ~~~~~~~~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~ 510 (634)
+++++ +|+|++|++|+|||.|+|+|+||+++||.|+|++..|++.| ++||++||++|++|++++.|++
T Consensus 368 ~~a~~---------~~~g~~gl~~lP~~~Ger~P~~d~~arg~~~Gl~~~~t~~~---l~RAvlEgia~~~r~~~~~l~~ 435 (572)
T 3jvp_A 368 EKASQ---------LRPGESGLLALDWWNGNRSILVDTELSGMLLGYTLQTKPEE---IYRALLEATAFGTRAIVDAFHG 435 (572)
T ss_dssp HHHTS---------SCTTSSCCEEECCTTCCCTTTCCSSCCEEEEEECTTCCHHH---HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHh---------CCCCCCCeEeCCccCCCCCCCCCCCcCEEEECCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 98876 44799999999999999999999999999999999999988 5679999999999999999998
Q ss_pred CCCCccEEEEecCCC-CCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcC----CCCCHHHHHHHhhhc-CcEEe
Q 006707 511 HGHKIDTLLACGGLA-KNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAK----RYSSLIEAMKAMNAA-GQVCM 584 (634)
Q Consensus 511 ~g~~~~~I~~~GG~a-~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g----~~~~~~e~~~~~~~~-~~~~~ 584 (634)
.|.++++|+++||++ ||++|+||+|||||+||+++...|++|+|||++|++++| .|+|++|+.+.+++. .++|+
T Consensus 436 ~g~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~~e~~~~~~~~~~~~~~ 515 (572)
T 3jvp_A 436 RGVEVHELYACGGLPQKNHLLMQIFADVTNREIKVAASKQTPALGAAMFASVAAGSEVGGYDSIEEAAKKMGRVKDETFK 515 (572)
T ss_dssp TTCCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEBCCSSHHHHHHHHHHHHHHCSSSSSCSCHHHHHHHHCCBCSCCBC
T ss_pred cCCCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEecCCCccHHHHHHHHHHHhcCCCccccCCHHHHHHHhhccCCeEEe
Confidence 888999999999999 999999999999999999999999999999999999999 999999999988765 58999
Q ss_pred echhhHHhhhHHhc
Q 006707 585 TVGFYLLTYLYLVY 598 (634)
Q Consensus 585 P~~~~~~~y~~~~~ 598 (634)
|.+...+.|..++.
T Consensus 516 P~~~~~~~Y~~~y~ 529 (572)
T 3jvp_A 516 PIPEHVAIYEKLYQ 529 (572)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHH
Confidence 98766666666444
No 6
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.7e-85 Score=728.73 Aligned_cols=466 Identities=19% Similarity=0.298 Sum_probs=400.0
Q ss_pred CCCCcEEEEEecCCcccEEEEEcCCCcEEEEEEeeecc-ccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEe
Q 006707 51 ARSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQI-WKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (634)
Q Consensus 51 ~m~~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~-~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgi 129 (634)
+|+++|+||||+|||++|++++|.+|+++++.+.+++. ++++||+||||++||+++.+++++++++.+++..+|.+|||
T Consensus 22 ~MM~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Igi 101 (520)
T 4e1j_A 22 SMMGGYILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITANDIAAIGI 101 (520)
T ss_dssp CCCSCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEE
T ss_pred HHhhCeEEEEEeCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEE
Confidence 35567999999999999999999999999999999976 45999999999999999999999999987777789999999
Q ss_pred cCC-ceeEEEc-CCCCceeeccCCCCCcceeEecccchHHHHHHHhcCC--hhHHHHhCCCCCCCChHHHHHHHHHhchh
Q 006707 130 AAT-CSLVAVD-ADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQE 205 (634)
Q Consensus 130 s~~-~~~V~~d-~~G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 205 (634)
++| |++|+|| ++|+|+ +|+|+|+|+|+.++++++++.. ++++++||+++++.++++||+|+++|+||
T Consensus 102 s~~g~~~v~~D~~~G~~l---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe 172 (520)
T 4e1j_A 102 TNQRETVVVWDRETGKPI---------HNAIVWQDRRTAAFCDKLKKKGLEKTFVKKTGLLLDPYFSGTKLNWLLSNVKG 172 (520)
T ss_dssp EECSSCEEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSSCSSTTSHHHHHHHHHHHSTT
T ss_pred eCCcceEEEEECCCCeEC---------ccccccccCCHHHHHHHHHhcccHHHHHHHHCCCCCchhHHHHHHHHHHcChH
Confidence 998 9999999 589999 8999999999999999999875 67999999999999999999999999999
Q ss_pred hHHhhce----eecchhHHHhhhhCCC-ccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCccccc
Q 006707 206 SWSMVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGH 280 (634)
Q Consensus 206 ~~~~~~~----~~~~~dyl~~~LTG~~-~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~ 280 (634)
+|+++++ |++++|||.|+|||+. ..+|.|+ ||+|+| ||+++++||+++|+.+||+.. +
T Consensus 173 ~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~td~s~--------As~t~l------~d~~~~~W~~~ll~~~gi~~~---~ 235 (520)
T 4e1j_A 173 AQVRAAKGELCFGTIDTFLIWRLTGGECFCTDATN--------ASRTLL------YNIAENAWDDELTEVLRVPKE---M 235 (520)
T ss_dssp HHHHHHTTCEEEEEHHHHHHHHHTTTCCCEEEHHH--------HTTSSS------EETTTTEECHHHHHHHTCCGG---G
T ss_pred HHHHHhcCCeEecCHHHHHHHHhcCCCeeeecHHH--------hhhhcc------cccccCCCCHHHHHHcCCCHH---H
Confidence 9999975 7789999999999973 2455554 455664 589999999999999999974 3
Q ss_pred ccccCcccccCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccc
Q 006707 281 HAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTST 360 (634)
Q Consensus 281 lp~l~~~~~~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~ 360 (634)
|| +++++++++|+ ++++ ||++||||++|++|++|+++|+ ++.+ +|++.+++|||+
T Consensus 236 LP----~i~~~~~~~G~-~~~~-----~l~~g~pV~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~ 290 (520)
T 4e1j_A 236 LP----EVKDCAADFGV-TDPS-----LFGAAIPILGVAGDQQAATIGQ-ACFK--------------PGMLKSTYGTGC 290 (520)
T ss_dssp SC----EEECSBSCCCB-CCHH-----HHTSCCBEEEECCHHHHHHHHT-TCCS--------------TTCEEEEESSSE
T ss_pred CC----ceecCCCceee-eChh-----hCCCCCeEEEECCcHHHHHHhC-CCCC--------------CCcEEEEecCch
Confidence 57 78899999998 9864 5679999999999999999998 5553 378999999999
Q ss_pred eeeeee-CcccccC-ccccccccccc-CCeeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhh
Q 006707 361 CHMAVS-RNKLFIP-GVWGPFWSAMV-PKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMI 437 (634)
Q Consensus 361 ~~~~~~-~~p~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~ 437 (634)
++.+.+ ++|..++ +.+..+++... ++.|..+++++++|.+++|+++.+.. ...|+++++++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~------------~~~~~~l~~~a~~-- 356 (520)
T 4e1j_A 291 FALLNTGKDMVRSKNRLLTTIAYRLDGETTYALEGSIFVAGAAVQWLRDGLKV------------IKAAPDTGSLAES-- 356 (520)
T ss_dssp EEEEECTTCCCCCSSSCEEEEEEEETTEEEEEEEEEESCSHHHHHHHHHTTCC------------C-----CHHHHHT--
T ss_pred heEEecCCccccCCCceeeEEeEecCCCceEEEcchHhhHHHHHHHHHHHcCC------------cccHHHHHHHHhc--
Confidence 887777 6665544 33322332221 34799999999999999999998753 1346777877765
Q ss_pred hhcCCCCccCCCCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CC
Q 006707 438 HERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAH----GH 513 (634)
Q Consensus 438 ~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~~----g~ 513 (634)
+ ++++|++|+|||+|+|+|+||+++||.|+|++..|++.| ++||++||++|++|++++.|++. |
T Consensus 357 -------~-~~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~---l~RAvlEgia~~~r~~l~~l~~~~~~~g- 424 (520)
T 4e1j_A 357 -------A-DPSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAE---FARAALEAVCYQTRDLLEAMHKDWRRNG- 424 (520)
T ss_dssp -------S-CTTCCCEEECCTTCBCTTTCBTTCCCEEEEECTTCCHHH---HHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred -------C-CCCCcEEEEcCccCCCCCCCCCCCCEEEecccCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHhhccCC-
Confidence 2 378999999999999999999999999999999999998 56799999999999999999875 6
Q ss_pred CccEEEEecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCCCHHHHHHHhhhcCcEEeechhhHHhh
Q 006707 514 KIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVCMTVGFYLLTY 593 (634)
Q Consensus 514 ~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~~~~e~~~~~~~~~~~~~P~~~~~~~y 593 (634)
++++|+++||++||++|+||+||+||+||++++..|++|+|||++|++++|.|+|++|+. ++++..++|+|.+...+ |
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~~~-~~~~~~~~~~P~~~~~~-~ 502 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRPVILETTALGVAWLAGSRAGVWPNQEAFA-KSWARDRRFEPHMDEAT-R 502 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEESCCCHHHHHHHHHHHHHHTSSCCHHHHH-HTCCEEEEECCCSCHHH-H
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEecCCCccHHHHHHHHHHHHcCCcCCHHHHH-hhcCCCeEECCCCCHHH-H
Confidence 889999999999999999999999999999999999999999999999999999999974 67788899999876544 4
Q ss_pred hH
Q 006707 594 LY 595 (634)
Q Consensus 594 ~~ 595 (634)
..
T Consensus 503 ~~ 504 (520)
T 4e1j_A 503 KV 504 (520)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 7
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=100.00 E-value=2.6e-84 Score=723.69 Aligned_cols=464 Identities=19% Similarity=0.322 Sum_probs=403.7
Q ss_pred CcEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~-~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
++|+||||+|||++|++|+|.+|+++++.+.+++.+ +++||+||||++||+++++++++++++.+++..+|.+|||++|
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 83 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQ 83 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred CCEEEEEEcCCCceEEEEECCCCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhheEEEEeeCC
Confidence 469999999999999999999999999999999864 4899999999999999999999999988877889999999998
Q ss_pred -ceeEEEcCC-CCceeeccCCCCCcceeEecccchHHHHHHHhcCC--hhHHHHhCCCCCCCChHHHHHHHHHhchhhHH
Q 006707 133 -CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWS 208 (634)
Q Consensus 133 -~~~V~~d~~-G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~ 208 (634)
|++|+||++ |+|+ +|+|+|+|+|+.++++++++.. ++++++||+++++.++++||+|+++|+||+|+
T Consensus 84 ~~~~v~~D~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 154 (506)
T 3h3n_X 84 RETTVVWDKTTGQPI---------ANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQE 154 (506)
T ss_dssp SSCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSCCCCTTSHHHHHHHHHHHSTTHHH
T ss_pred cccEEEEeCCCCeEC---------CCceEecCcchHHHHHHHHhccCHHHHHHHhCCCCCchhHHHHHHHHHHhCHHHHH
Confidence 999999998 9999 8999999999999999999875 67999999999999999999999999999999
Q ss_pred hhce----eecchhHHHhhhhCCC-ccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCcccccccc
Q 006707 209 MVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 283 (634)
Q Consensus 209 ~~~~----~~~~~dyl~~~LTG~~-~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~lp~ 283 (634)
++.+ |++++|||.|+|||+. ..+|.| +||+|+| ||+++++||+++|+.+|||+. +||
T Consensus 155 ~~~~~~~~~~~~~dyl~~~LTG~~~~~td~s--------~As~t~l------~d~~~~~W~~~ll~~~gi~~~---~LP- 216 (506)
T 3h3n_X 155 KADNGELLFGTIDSWLVWKLTDGQVHVTDYS--------NASRTML------YNIHKLEWDQEILDLLNIPSS---MLP- 216 (506)
T ss_dssp HHHTTCEEEECHHHHHHHHHTTTSCCEEEHH--------HHHTTTS------EETTTTEECHHHHHHTTCCGG---GCC-
T ss_pred HHhcCCeEEecHHHHHHHHhcCCceeeeEHH--------HhhhhhC------eecCCCCcCHHHHHHcCcCHH---HCC-
Confidence 9986 7889999999999953 235555 3556664 589999999999999999974 357
Q ss_pred cCcccccCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccceee
Q 006707 284 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 363 (634)
Q Consensus 284 l~~~~~~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~~~~ 363 (634)
+++++++++|+ +++++ ++| +||||++|++|++|+++|+ +..+ +|++.+++|||+++.
T Consensus 217 ---~i~~~~~~~G~-~~~~~--~lg--~g~pV~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~~~~ 273 (506)
T 3h3n_X 217 ---EVKSNSEVYGH-TRSYR--FYG--SEVPIAGMAGDQQAALFGQ-MAFE--------------KGMIKNTYGTGAFIV 273 (506)
T ss_dssp ---EEECSEEEEEE-CCGGG--TTT--CCCEEEEEEEHHHHHHHHT-TCCS--------------TTCEEEEESSSEEEE
T ss_pred ---ceecCCCccee-eChHH--hcC--CCCeEEEECCcHHHHHHhC-CCCC--------------CCcEEEEecchheee
Confidence 78899999998 99876 466 8999999999999999998 5554 478999999999877
Q ss_pred eeeC-cccccC-cccccccccccCC--eeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhh
Q 006707 364 AVSR-NKLFIP-GVWGPFWSAMVPK--FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHE 439 (634)
Q Consensus 364 ~~~~-~p~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~ 439 (634)
+.++ +|...+ +.+..++ +..++ .|..+++++++|.+++|+++.+.. ...|+++++++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~g~~~~~G~~~~W~~~~~~~------------~~~~~~l~~~a~~---- 336 (506)
T 3h3n_X 274 MNTGEEPQLSDNDLLTTIG-YGINGKVYYALEGSIFVAGSAIQWLRDGLRM------------IETSPQSEELAAK---- 336 (506)
T ss_dssp EEEETCCCSCCTTSEEEEE-EEETTEEEEEEEEEECCSSHHHHHHHHTSCC------------CSSTTHHHHHHTT----
T ss_pred eecCCccccCCCceEEEee-eecCCCCEEEEecchhhHHHHHHHHHHHcCC------------CCcHHHHHHHHhc----
Confidence 6654 454433 3332233 23344 699999999999999999998752 1346678877765
Q ss_pred cCCCCccCCCCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCccEE
Q 006707 440 RNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHKIDTL 518 (634)
Q Consensus 440 ~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~-~g~~~~~I 518 (634)
+|+ .+|++|+|||+|+|+|+||+++||.|+|++..|++.| ++||++||++|++|++++.|++ .|.++++|
T Consensus 337 -----~~~-~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~---l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i 407 (506)
T 3h3n_X 337 -----AKG-DNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKED---FVRATLQAVAYQSKDVIDTMKKDSGIDIPLL 407 (506)
T ss_dssp -----CCS-CSCCEEECCTTCBCTTTCBTTCCCEEECCCTTCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHCSCCCEE
T ss_pred -----CCC-CCceEEeccccCCCCCccCCCCCEEEEccCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCCCEE
Confidence 224 4899999999999999999999999999999999988 5679999999999999999987 58899999
Q ss_pred EEecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCCCHHHHHHHhhhcCcEEeechhhHHhhhH
Q 006707 519 LACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVCMTVGFYLLTYLY 595 (634)
Q Consensus 519 ~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~~~~e~~~~~~~~~~~~~P~~~~~~~y~~ 595 (634)
+++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|+|++|+ +++++..++|+|.+... .|..
T Consensus 408 ~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~~~~~~~P~~~~~-~~~~ 482 (506)
T 3h3n_X 408 KVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDEL-KSMAEEGQMFTPEMPAE-ERDN 482 (506)
T ss_dssp EEESGGGGCHHHHHHHHHHHTSEEEECSSSCHHHHHHHHHHHHHTTSSCSHHHH-HTTCCCCCEECCCSCHH-HHHH
T ss_pred EEecccccCHHHHHHHHHHhCCeEEecCCCcchhHHHHHHHHHHhCccCCHHHH-HHhcCCCeEECCCCCHH-HHHH
Confidence 999999999999999999999999999999999999999999999999999986 56788899999976543 3544
No 8
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=100.00 E-value=2.3e-84 Score=721.01 Aligned_cols=475 Identities=24% Similarity=0.339 Sum_probs=406.7
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC-c
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT-C 133 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~-~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~-~ 133 (634)
++||||+|||++|++++|.+|++++..+.+++.+. ++||+||||++||+++++++++++++. ...+|.+|||++| |
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~--~~~~i~~Igis~~~~ 78 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQH--SLQDVKALGIAGQMH 78 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHS--CCTTCCEEEEEECSS
T ss_pred CEEEEEecCcccEEEEECCCCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhC--CccceEEEEEcCCcC
Confidence 47999999999999999999999999999998654 899999999999999999999998874 3568999999998 9
Q ss_pred eeEEEcCCCCceeeccCCCCCcceeEecccchHHHHHHHhcCChhHHHHhCCCCCCCChHHHHHHHHHhchhhHHhhcee
Q 006707 134 SLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFRW 213 (634)
Q Consensus 134 ~~V~~d~~G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~~ 213 (634)
++|+||++|+|+ +|+|.|+|.|+.++++++++....++++||+++++.++++||+|+++|+||+|+++.+|
T Consensus 79 ~~v~~D~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~P~~~~~~~~~ 149 (484)
T 2itm_A 79 GATLLDAQQRVL---------RPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKV 149 (484)
T ss_dssp CBEEECTTCCBC---------SCEECTTCCTTHHHHHHHHHHCTTHHHHHSSCCCTTSHHHHHHHHHHHCHHHHTTCCEE
T ss_pred cEEEECCCcCCC---------cccceecccCcHHHHHHHHHhHHHHHHHhCCCCCcccHHHHHHHHHHhChHHHHHHhhe
Confidence 999999999999 89999999999999999988765677889999999999999999999999999999999
Q ss_pred ecchhHHHhhhhCCCccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCcccccccccCcccccCCC
Q 006707 214 MDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVAFPGH 293 (634)
Q Consensus 214 ~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~lp~l~~~~~~~g~ 293 (634)
+.++|||.|+|||+.. ++.| +||+|++ ||+++++||+++|+.+||+.. .|| +++++++
T Consensus 150 l~~~d~l~~~LTG~~~-td~s--------~As~t~l------~d~~~~~W~~~ll~~~gi~~~---~lp----~i~~~~~ 207 (484)
T 2itm_A 150 LLPKDYLRLRMTGEFA-SDMS--------DAAGTMW------LDVAKRDWSDVMLQACDLSRD---QMP----ALYEGSE 207 (484)
T ss_dssp ECHHHHHHHHHHSCCE-EEHH--------HHHTTTC------EETTTTEECHHHHHTTTCCGG---GSC----EEECTTS
T ss_pred eCcHHHHHHHHhCCce-eeHH--------Hhhcccc------ccCCCCCcCHHHHHHcCCCHH---HCC----CccCCcc
Confidence 9999999999999874 4544 4556664 589999999999999999974 346 7889999
Q ss_pred cccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccceeeeeeCcccccC
Q 006707 294 PLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRNKLFIP 373 (634)
Q Consensus 294 ~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~~~~~~~~~p~~~~ 373 (634)
++|+ |++++|+++||+ ||||++|+||++|+++|+ +..+ +|++++++|||+++.+++++|..++
T Consensus 208 ~~G~-~~~~~a~~~Gl~-g~pV~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~~~~~~~~~~~~~~ 270 (484)
T 2itm_A 208 ITGA-LLPEVAKAWGMA-TVPVVAGGGDNAAGAVGV-GMVD--------------ANQAMLSLGTSGVYFAVSEGFLSKP 270 (484)
T ss_dssp EEEE-CCHHHHHHHTSC-CCEEECCEEHHHHHHHHH-TCCS--------------TTCEEEEESSSEEEEEECSSCCCCC
T ss_pred eeec-cCHHHHHHhCCC-CCeEEEEchHHHHHHHhC-CCCC--------------CCcEEEEccchheeEEecCCCccCc
Confidence 9998 999999999999 999999999999999998 4443 3789999999999999888876554
Q ss_pred cc-cccccccccCCeeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhhcCCCCccCCCCcE
Q 006707 374 GV-WGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAALTEDI 452 (634)
Q Consensus 374 ~~-~~~~~~~~~~~~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~gl 452 (634)
.. ...+ .+..++.|+.++++.++|.+++|+++.+.. ..|+.+++++++ +|++++|+
T Consensus 271 ~~~~~~~-~~~~~g~~~~~~~~~~~G~~~~W~~~~~~~-------------~~~~~~~~~a~~---------~~~~~~gl 327 (484)
T 2itm_A 271 ESAVHSF-CHALPQRWHLMSVMLSAASCLDWAAKLTGL-------------SNVPALIAAAQQ---------ADESAEPV 327 (484)
T ss_dssp SSSCEEE-ECSSTTCEEEEEEECCHHHHHHHHHHHTTC-------------CSHHHHHHHGGG---------CCTTSCCC
T ss_pred ccceEEe-ecccCCeeeeeehhhhHHHHHHHHHHhcCc-------------ccHHHHHHHHhc---------CCCCCCCe
Confidence 21 1122 344688999999999999999999987631 246667776654 34799999
Q ss_pred EEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHH
Q 006707 453 HVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQ 532 (634)
Q Consensus 453 ~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Q 532 (634)
+|+|||+|+|+|+||+++||.|+|++..|++.| ++||++||++|++|++++.|++.|.++++|+++||++||++|+|
T Consensus 328 ~~lP~~~G~r~P~~~~~a~g~~~Gl~~~~~~~~---~~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Q 404 (484)
T 2itm_A 328 WFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNE---LARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQ 404 (484)
T ss_dssp EEEEEEC--------CCEEEEEEEEETTCCHHH---HHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHH
T ss_pred EEeCCCCCCCCCCCCCCCceEEEcCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHH
Confidence 999999999999999999999999999999988 56799999999999999999988888899999999999999999
Q ss_pred HHHHhhCCceeccCCCCh-hhHHHHHHHHhhcCCCCCHHHHHHHhhhcCcEEeechhhHHhhhHHhccccchhhhhhhhH
Q 006707 533 QHADIIGCPIILPRENES-VLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVCMTVGFYLLTYLYLVYITRDKEAKICQLI 611 (634)
Q Consensus 533 i~Advlg~pV~~~~~~ea-~alGAA~lA~~~~g~~~~~~e~~~~~~~~~~~~~P~~~~~~~y~~~~~~~~~~~~~~~~~~ 611 (634)
++||++|+||++++..|. +|+|||++|++++|.|+|++|+.+.+ ...++|+|.+...+.|..++. +++++.+.+
T Consensus 405 i~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~~~~~~~~~~~~-~~~~~~~P~~~~~~~y~~~y~----~~~~~~~~~ 479 (484)
T 2itm_A 405 MLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQL-PLEQSHLPDAQRYAAYQPRRE----TFRRLYQQL 479 (484)
T ss_dssp HHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHCTTSCHHHHSCCC-CEEEEECCCHHHHHHHHHHHH----HHHHHHHHH
T ss_pred HHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcCCcCCHHHHHHhc-CCCeEECCCHHHHHHHHHHHH----HHHHHHHHH
Confidence 999999999999998885 89999999999999999999986654 567899998776666766443 344554443
No 9
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=100.00 E-value=8.4e-84 Score=718.97 Aligned_cols=466 Identities=19% Similarity=0.303 Sum_probs=404.1
Q ss_pred CCCCcEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEe
Q 006707 51 ARSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (634)
Q Consensus 51 ~m~~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~-~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgi 129 (634)
.|+ +|+||||+|||++|++++|.+|+++++.+++++.. +++||+||||++||+++++++++++++.+++..+|.+|||
T Consensus 3 aM~-~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~I~~Igi 81 (501)
T 3g25_A 3 AME-KYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVRADQIAGIGI 81 (501)
T ss_dssp CCC-CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEE
T ss_pred ccc-cEEEEEEeCccceEEEEEcCCCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEE
Confidence 354 69999999999999999999999999999999764 4999999999999999999999999988777789999999
Q ss_pred cCC-ceeEEEcCC-CCceeeccCCCCCcceeEecccchHHHHHHHhcCC--hhHHHHhCCCCCCCChHHHHHHHHHhchh
Q 006707 130 AAT-CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQE 205 (634)
Q Consensus 130 s~~-~~~V~~d~~-G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 205 (634)
++| |++++||++ |+|+ +|+|+|+|+|+.++++++++.. ++++++||+++++.++++||+|+++|+||
T Consensus 82 s~~~~~~v~~D~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~ 152 (501)
T 3g25_A 82 TNQRETTVVWDKHTGRPI---------YHAIVWQSRQTQSICSELKQQGYEQTFRDKTGLLLDPYFAGTKVKWILDNVEG 152 (501)
T ss_dssp EECSSCEEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSCCSSTTSHHHHHHHHHHHSTT
T ss_pred ECCcCcEEEEECCCCeEC---------CCceeeccCChHHHHHHHHhccCHHHHHHHHCCCCCchhHHHHHHHHHHhCHH
Confidence 998 999999998 9999 8999999999999999999875 67999999999999999999999999999
Q ss_pred hHHhhce----eecchhHHHhhhhCCC-ccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCccccc
Q 006707 206 SWSMVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGH 280 (634)
Q Consensus 206 ~~~~~~~----~~~~~dyl~~~LTG~~-~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~ 280 (634)
+|+++.+ |++++|||.|+|||+. ..+|.|+ ||+|++ ||+++++||+++|+.+||+.. +
T Consensus 153 ~~~~~~~~~~l~~~~~dyl~~~LTG~~~~~td~s~--------As~t~l------~d~~~~~W~~~ll~~~gi~~~---~ 215 (501)
T 3g25_A 153 AREKAENGDLLFGTIDTWLVWKLSGKAAHITDYSN--------ASRTLM------FNIHDLEWDDELLELLTVPKN---M 215 (501)
T ss_dssp HHHHHHTTCEEEEEHHHHHHHHHTTTSCCEEEHHH--------HTTSSS------EETTTTEECHHHHHHHTCCGG---G
T ss_pred HHHHHhcCCeEEecHHHHHHHHhcCCCeeeeeHHH--------hhcccC------eeCCCCCCCHHHHHHhCcCHH---H
Confidence 9999987 7889999999999952 2355554 455664 589999999999999999974 3
Q ss_pred ccccCcccccCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccc
Q 006707 281 HAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTST 360 (634)
Q Consensus 281 lp~l~~~~~~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~ 360 (634)
|| +++++++++|+ ++++. .+| +||||++|++|++|+++|+ +..+ +|++++++|||+
T Consensus 216 LP----~i~~~~~~~G~-~~~~~--~~g--~g~pV~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~ 271 (501)
T 3g25_A 216 LP----EVKASSEVYGK-TIDYH--FYG--QEVPIAGVAGDQQAALFGQ-ACFE--------------RGDVKNTYGTGG 271 (501)
T ss_dssp CC----EEECSEEEEEE-CCGGG--TTT--CCCEEEEEEEHHHHHHHHT-TCCS--------------TTCEEEEESSSE
T ss_pred CC----ceecCCCceec-cchHH--hCC--CCCeEEEECccHHHHHHhC-CCCC--------------CCcEEEEccchh
Confidence 57 78899999998 98763 445 8999999999999999998 5453 478999999999
Q ss_pred eeeeeeC-cccccC-cccccccccccCC--eeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhh
Q 006707 361 CHMAVSR-NKLFIP-GVWGPFWSAMVPK--FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESM 436 (634)
Q Consensus 361 ~~~~~~~-~p~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~ 436 (634)
++.+.+. +|...+ +.+..++ +..++ .|..+++++++|.+++|+++.+.. ...|+++++++++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~------------~~~~~~l~~~a~~~ 338 (501)
T 3g25_A 272 FMLMNTGDKAVKSESGLLTTIA-YGIDGKVNYALEGSIFVSGSAIQWLRDGLRM------------INSAPQSESYATRV 338 (501)
T ss_dssp EEEEECTTSCCCCSSSCEEEEE-EEETTEEEEEEEEEESCSTHHHHHHHHTSCC------------CSSGGGHHHHHTTS
T ss_pred heeeecCCccccCCCCeEEEee-EecCCccEEEEecccccHHHHHHHHHHHcCC------------CCcHHHHHHHHhhC
Confidence 8777664 454443 3332233 23344 799999999999999999998752 13456777777652
Q ss_pred hhhcCCCCccCCCCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCc
Q 006707 437 IHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHKI 515 (634)
Q Consensus 437 ~~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~-~g~~~ 515 (634)
|+ .+|++|+|||.|+|+|+||+++||.|+|++..|++.| ++||++||++|.+|++++.|++ .|.++
T Consensus 339 ---------~~-~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~---l~RAvlEgia~~~~~~~~~l~~~~g~~~ 405 (501)
T 3g25_A 339 ---------DS-TEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEH---FIRATLESLCYQTRDVMEAMSKDSGIDV 405 (501)
T ss_dssp ---------SC-CTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHH---HHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ---------CC-CCeEEEecccccCCCCCCCCCCCEEEEccCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 23 5899999999999999999999999999999999998 5679999999999999999987 68899
Q ss_pred cEEEEecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCCCHHHHHHHhhhcCcEEeechhhHHhhhH
Q 006707 516 DTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVCMTVGFYLLTYLY 595 (634)
Q Consensus 516 ~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~~~~e~~~~~~~~~~~~~P~~~~~~~y~~ 595 (634)
++|+++||++||++|+||+||+||+||++++..|++|+|||++|++++|.|+|++|+ +++++..++|+|.+...+ |..
T Consensus 406 ~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~~~~~~~-~~~~~~~~~~~P~~~~~~-~~~ 483 (501)
T 3g25_A 406 QSLRVDGGAVKNNFIMQFQADIVNTSVERPEIQETTALGAAFLAGLAVGFWESKDDI-AKNWKLEEKFDPKMDEGE-REK 483 (501)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCTHHH-HHHCCEEEEECCCCCHHH-HHH
T ss_pred cEEEEecchhcCHHHHHHHHHHhCCceEecCCCcchHHHHHHHHHHHhCccCCHHHH-HHhccCCeEECCCCCHHH-HHH
Confidence 999999999999999999999999999999999999999999999999999999986 667888999999765432 544
No 10
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=1.9e-84 Score=725.06 Aligned_cols=466 Identities=20% Similarity=0.287 Sum_probs=403.8
Q ss_pred CcEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~-~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
++|+||||+|||++|++|+|.+|+++++.+++++.. +++||+||||++||+++++++++++++.+++..+|.+|||++|
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 81 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQ 81 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred CcEEEEEEcCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhheEEEEEeCC
Confidence 469999999999999999999999999999999764 5999999999999999999999999988877889999999998
Q ss_pred -ceeEEEcCC-CCceeeccCCCCCcceeEecccchHHHHHHHhcCC--hhHHHHhCCCCCCCChHHHHHHHHHhchhhHH
Q 006707 133 -CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWS 208 (634)
Q Consensus 133 -~~~V~~d~~-G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~ 208 (634)
|++|+||++ |+|+ +|+|+|+|+|+.++++++++.. ++++++||+++++.|+++||+|+++|+||+|+
T Consensus 82 ~~~~v~~D~~~G~~l---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 152 (510)
T 2p3r_A 82 RETTIVWEKETGKPI---------YNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRE 152 (510)
T ss_dssp SSCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHCCCSSTTSHHHHHHHHHHHSTTHHH
T ss_pred cCcEEEEECCCCeEC---------cccccccCccHHHHHHHHHhcccHHHHHHHhCCCCCcccHHHHHHHHHHcCHHHHH
Confidence 999999998 9999 8999999999999999999875 67999999999999999999999999999999
Q ss_pred hhce----eecchhHHHhhhhCCC-ccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCcccccccc
Q 006707 209 MVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 283 (634)
Q Consensus 209 ~~~~----~~~~~dyl~~~LTG~~-~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~lp~ 283 (634)
++.+ |++++|||.|+|||+. ..+|.| +||+|++ ||+++++||+++|+.+||+.. +||
T Consensus 153 ~~~~~~~l~~~~~dyl~~~LTG~~~~~td~s--------~As~t~l------~d~~~~~W~~~ll~~~gi~~~---~LP- 214 (510)
T 2p3r_A 153 RARRGELLFGTVDTWLIWKMTQGRVHVTDYT--------NASRTML------FNIHTLDWDDKMLEVLDIPRE---MLP- 214 (510)
T ss_dssp HHHTTCEEEECHHHHHHHHHTTTSCCEEEHH--------HHHTTSS------EETTTTEECHHHHHHHTCCGG---GCC-
T ss_pred HHhcCCeEecCHHHHHHHHhcCCCeEEeehh--------Hhhhhcc------ccCccCCCCHHHHHHhCCCHH---HCC-
Confidence 9988 7789999999999942 235555 4556664 589999999999999999974 347
Q ss_pred cCcccccCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccceee
Q 006707 284 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 363 (634)
Q Consensus 284 l~~~~~~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~~~~ 363 (634)
+++++++++|+ +++ +.+| ++||||++|++|++|+++|+ +..+ +|++.+++|||+++.
T Consensus 215 ---~i~~~~~~~G~-~~~---~~lG-~~g~pV~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~~~~ 271 (510)
T 2p3r_A 215 ---EVRRSSEVYGQ-TNI---DGKG-GTRIPISGIAGDQQAALFGQ-LCVK--------------EGMAKNTYGTGCFML 271 (510)
T ss_dssp ---EEECSEEEEEE-ECT---TCTT-SCCEEEEEEEEHHHHHHHHT-TCCS--------------TTCEEEEESSSEEEE
T ss_pred ---ceecCCCceee-ech---hhcC-CCCCeEEEECchHHHHHHhc-CCCC--------------CCcEEEeecchheeE
Confidence 78889999998 876 4577 89999999999999999998 5443 378999999999766
Q ss_pred eee-CcccccC-ccccccccccc-CCeeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhhc
Q 006707 364 AVS-RNKLFIP-GVWGPFWSAMV-PKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHER 440 (634)
Q Consensus 364 ~~~-~~p~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~ 440 (634)
+.+ ++|..++ +.+..+++... ++.|..+++++++|.+++|+++.+... ..|+++++++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~------------~~~~~l~~~a~~----- 334 (510)
T 2p3r_A 272 MNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLI------------NDAYDSEYFATK----- 334 (510)
T ss_dssp EECTTCCCCCSSSCEEEEEECTTSCEEEEEEEEESCSHHHHHHHHHTSCCC------------CSSSCHHHHHTT-----
T ss_pred EecCCccccCCCCeeEEEeeecCCCceEEEccchhhHHHHHHHHHHHccCC------------CcHHHHHHHHhh-----
Confidence 655 5555444 33322332222 358999999999999999999987531 235667777764
Q ss_pred CCCCccCCCCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCccEEE
Q 006707 441 NSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAH-GHKIDTLL 519 (634)
Q Consensus 441 ~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~~-g~~~~~I~ 519 (634)
+ ++++|++|+|||.|+|+|+||+++||.|+|++..|++.| ++||++||++|++|++++.|++. |.++++|+
T Consensus 335 ----~-~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~---l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~ 406 (510)
T 2p3r_A 335 ----V-QNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANH---IIRATLESIAYQTRDVLEAMQADSGIRLHALR 406 (510)
T ss_dssp ----S-SSCTTCEEECCTTCCBTTTCCTTCCEEEEEECTTCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEE
T ss_pred ----C-CCCCceEEeCcccCCCCCCCCCCCCEEEECCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCccEEE
Confidence 2 368999999999999999999999999999999999988 56799999999999999999874 88999999
Q ss_pred EecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCCCHHHHHHHhhhcCcEEeechhhHHhhhHH
Q 006707 520 ACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVCMTVGFYLLTYLYL 596 (634)
Q Consensus 520 ~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~~~~e~~~~~~~~~~~~~P~~~~~~~y~~~ 596 (634)
++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|+|++|+ +++++..++|+|.++ .+.|..+
T Consensus 407 ~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~~~~~~~P~~~-~~~~~~~ 481 (510)
T 2p3r_A 407 VDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDEL-QEKAVIEREFRPGIE-TTERNYR 481 (510)
T ss_dssp EESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHHTSSSCGGGG-TTCCCEEEEECCCSC-HHHHHHH
T ss_pred EeCchhcCHHHHHHHHHHhCCceEecCCCCcHHHHHHHHHHHHhCccCCHHHH-HHhcCCCeEECCCCC-HHHHHHH
Confidence 99999999999999999999999999999999999999999999999999985 667788899999864 3455543
No 11
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=3.3e-84 Score=726.08 Aligned_cols=461 Identities=19% Similarity=0.282 Sum_probs=397.0
Q ss_pred CcEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~-~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
++|+||||+||||+|++|||.+|+++++++.+|+.+ +++||+||||++||+++++++++++++.++++.+|++||||+|
T Consensus 3 kkYvlgID~GTss~Ka~l~d~~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~~~I~aIgis~q 82 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQ 82 (526)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred ceEEEEEEccccceeeeEEcCCCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhhEEEEEEeCC
Confidence 579999999999999999999999999999999865 4999999999999999999999999999998999999999998
Q ss_pred -ceeEEEcCC-CCceeeccCCCCCcceeEecccchHHHHHHHhcCC--hhHHHHhCCCCCCCChHHHHHHHHHhchhhHH
Q 006707 133 -CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWS 208 (634)
Q Consensus 133 -~~~V~~d~~-G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~ 208 (634)
|++|+||++ |+|+ +|+|+|+|+|+.++++++.+.. +.++++||+++++.|+++||+|+++|+||+|+
T Consensus 83 ~~~~v~~D~~~G~pl---------~~ai~W~D~R~~~~~~~l~~~~~~~~i~~~tG~~~~~~~~~~kl~Wl~~~~p~~~~ 153 (526)
T 3ezw_A 83 RETTIVWEKETGKPI---------YNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRE 153 (526)
T ss_dssp SSCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHCCCSSTTSHHHHHHHHHHHSTTHHH
T ss_pred CCCEEEEECCCCeEc---------ccceecCCcchHHHHHHHHhhccHHHHHHHhCCCCCcccHHHHHHHHHHcCchHHH
Confidence 999999985 9999 8999999999999999999876 56899999999999999999999999999999
Q ss_pred hhce----eecchhHHHhhhhCCCc-cccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCcccccccc
Q 006707 209 MVFR----WMDLSDWLSYRATGDDT-RSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 283 (634)
Q Consensus 209 ~~~~----~~~~~dyl~~~LTG~~~-~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~lp~ 283 (634)
++.+ +..+++||.|+|||... .+|.| +||+|++ ||+++++||+++|+.+||+..+ ||
T Consensus 154 ~~~~~~~~~~~i~~~L~~~Lt~g~~~~td~s--------~As~t~l------~d~~~~~w~~~ll~~~gi~~~~---LP- 215 (526)
T 3ezw_A 154 RARRGELLFGTVDTWLIWKMTQGRVHVTDYT--------NASRTML------FNIHTLDWDDKMLEVLDIPREM---LP- 215 (526)
T ss_dssp HHHTTCEEEECHHHHHHHHHTTTSCCEEEHH--------HHTTSSS------EETTTTEECHHHHHHHTCCGGG---CC-
T ss_pred HHHHhhhhccchhHHHhhhhcCCCceEEEch--------hhccccC------cCccccCcCHHHHHHcCCCHHH---CC-
Confidence 9986 56778899999997543 45555 4556664 5899999999999999999843 47
Q ss_pred cCcccccCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccceee
Q 006707 284 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 363 (634)
Q Consensus 284 l~~~~~~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~~~~ 363 (634)
+++++++++|+ ++++++ +..|+||++|++|++|+++|+ +..+ +|++.+++|||+++.
T Consensus 216 ---~i~~~~~~~G~-~~~~~~----~~~gipV~~g~gD~~aa~~G~-g~~~--------------~g~~~~s~GTs~~~~ 272 (526)
T 3ezw_A 216 ---EVRRSSEVYGQ-TNIDGK----GGTRIPISGIAGDQQAALFGQ-LCVK--------------EGMAKNTYGTGCFML 272 (526)
T ss_dssp ---EEECSEEEEEE-ECTTCT----TSCCEEEEEEEEHHHHHHHHT-TCCS--------------TTCEEEEESSSEEEE
T ss_pred ---CccccccccCc-cchhhh----cCCCCcEEEEcchHHHHhhhc-cccc--------------cceeEEEeccCeeEe
Confidence 78889999998 987654 446789999999999999998 4453 478999999999998
Q ss_pred eeeCcccccCc--cccc-ccccccCCeeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhhc
Q 006707 364 AVSRNKLFIPG--VWGP-FWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHER 440 (634)
Q Consensus 364 ~~~~~p~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~ 440 (634)
+.++++...+. .... .+.+..++.|.+++++.++|.+++||++.+..... . ...+.. ..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~eg~~~~~G~~~~Wl~~~~~~~~~-----------~-~~~~~~-~~----- 334 (526)
T 3ezw_A 273 MNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLIND-----------A-YDSEYF-AT----- 334 (526)
T ss_dssp EECTTSCCCCSSSCEEEEEECTTSCEEEEEEEEESCSHHHHHHHHHTSCCCCS-----------S-SCHHHH-HT-----
T ss_pred cccCCccccccccceeeeeeccCCcceeeeHHHHHHHHHHHHHHHHHhccccc-----------h-hHHHHH-Hh-----
Confidence 88887765442 2111 12223456799999999999999999998753210 0 111222 22
Q ss_pred CCCCccCCCCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCccEEE
Q 006707 441 NSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHKIDTLL 519 (634)
Q Consensus 441 ~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~-~g~~~~~I~ 519 (634)
.+++++|++|+|||+|+|+|+||+++||+|+|++..|++.| ++||++||++|++|++++.|++ .|.++++|+
T Consensus 335 ----~~~~~~gl~~lP~~~G~r~P~~d~~arG~~~Glt~~~~~~~---i~RAvlEgia~~~r~~le~l~~~~g~~~~~i~ 407 (526)
T 3ezw_A 335 ----KVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANH---IIRATLESIAYQTRDVLEAMQADSGIRLHALR 407 (526)
T ss_dssp ----TSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEE
T ss_pred ----ccCCCCCeEEeCCCCCCCCCCCCcccCeEEecCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEE
Confidence 23689999999999999999999999999999999999998 5679999999999999999975 688999999
Q ss_pred EecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCCCHHHHHHHhhhcCcEEeechhhH
Q 006707 520 ACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVCMTVGFYL 590 (634)
Q Consensus 520 ~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~~~~e~~~~~~~~~~~~~P~~~~~ 590 (634)
++||++||++|+||+|||||+||++++..|++|+|||++|++++|.|+|++|+.+ +....++|+|.....
T Consensus 408 v~GGgaks~~~~Qi~ADvlg~pV~~~~~~E~~alGAA~lA~~a~G~~~~~~e~~~-~~~~~~~~~P~~~~~ 477 (526)
T 3ezw_A 408 VDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQE-KAVIEREFRPGIETT 477 (526)
T ss_dssp EESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCGGGSTT-CCCEEEEECCCSCHH
T ss_pred EECchhhCHHHHHHHHHHHCCEEEeCCCCchHHHHHHHHHHHHhCCCCCHHHHHH-hcCCCeEEcCCCCHH
Confidence 9999999999999999999999999999999999999999999999999998754 445789999965433
No 12
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=100.00 E-value=1.4e-83 Score=722.54 Aligned_cols=488 Identities=15% Similarity=0.070 Sum_probs=408.5
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccc-c----CCCc-------cccCHH-HHHHHHHHHHHHHHHHcCCCC
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-K----EGDC-------IEQSST-DIWHAICAAVDSACSLANVDG 121 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~-~----~~g~-------~eqdp~-~~~~a~~~~l~~~l~~~~~~~ 121 (634)
+|+||||+|||++|++|||.+|+++++++++|+.+ + .+|| .||||+ .||+++..++ +.+++.+++.
T Consensus 10 ~~~lgID~GTts~Ka~l~d~~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~-~~l~~~~~~~ 88 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIIL-EKMKASGFDF 88 (538)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHH-HHHHHTTCCG
T ss_pred CEEEEEEEcCcCEEEEEECCCCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHH-HHHHHcCCCh
Confidence 59999999999999999999999999999999642 2 2566 467897 5676665555 5566777778
Q ss_pred CCeEEEEecCC-ceeEEEcCCCCceeeccC-----------CCCCcceeEecccchHHHHHHHhcCC---hhHHHHhCCC
Q 006707 122 EEVKGVGFAAT-CSLVAVDADGSPVSVSWN-----------GDSRRNIIVWMDHRAVKQAEKINSRN---SPVLQYCGGA 186 (634)
Q Consensus 122 ~~I~aIgis~~-~~~V~~d~~G~pl~~~~~-----------~~~~~~~i~W~D~Ra~~~~~~l~~~~---~~~~~~tG~~ 186 (634)
.+|++||||+| |++|+||++|+..+.+++ +++++|+|+|+|+|+.++++++++.. ++++++||++
T Consensus 89 ~~I~aIgis~q~~~~v~~D~~g~~~l~~l~~~~~l~~~~~~~~pl~~ai~W~D~R~~~~~~~l~~~~~~~~~~~~~tG~~ 168 (538)
T 4bc3_A 89 SQVLALSGAGQQHGSIYWKAGAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTTAQCRQLEAAVGGAQALSCLTGSR 168 (538)
T ss_dssp GGEEEEEEEECSSCEEEEETTHHHHHHTCCTTSCHHHHHTTCBSCSEEECTTCCCCHHHHHHHHHHHTSHHHHHHHHSSC
T ss_pred HHeEEEEecccceeEEEECCCccccccccccccchhhhccccccccCCcccccCcHHHHHHHHHHhhCcHHHHHHHHCCC
Confidence 89999999998 999999999750000000 01229999999999999999998863 6799999999
Q ss_pred CCCCChHHHHHHHHHhchhhHHhhceeecchhHHHhhhhCCCccccccccccccccccchhhhccccccCCCcCCCCCHH
Q 006707 187 VSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDE 266 (634)
Q Consensus 187 ~~~~~~~~kl~wl~~~~Pe~~~~~~~~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~ 266 (634)
+++.|+++||+|+++|+||+|+++.+|++++|||.|+|||+...+|.|+ ||+|++ ||+++++||++
T Consensus 169 ~~~~~~~~kl~wl~~~~Pe~~~~~~~~~~~~d~l~~~LTG~~~~td~s~--------As~t~l------~d~~~~~W~~~ 234 (538)
T 4bc3_A 169 AYERFTGNQIAKIYQQNPEAYSHTERISLVSSFAASLFLGSYSPIDYSD--------GSGMNL------LQIQDKVWSQA 234 (538)
T ss_dssp CCTTSHHHHHHHHHHHCHHHHHTEEEEEEHHHHHHHHHHTSCCCCBHHH--------HTTSSC------EETTTTEECHH
T ss_pred CccccHHHHHHHHHHcCHHHHHHhheEEcHHHHHHHHHhCCCcccccch--------hhcccc------cccccCCCCHH
Confidence 9999999999999999999999999999999999999999976566664 455554 58999999999
Q ss_pred HHHHcCCC-CcccccccccCcccccCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhh
Q 006707 267 FWEEIGLG-DLIDGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEE 345 (634)
Q Consensus 267 ~L~~~gi~-~~l~~~lp~l~~~~~~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~ 345 (634)
+|+.+|++ . ++|| +++++++++|+ |++++|+++||++||||++|+||++|+++|+ ++.
T Consensus 235 ll~~~gi~~~---~~LP----~i~~~~~~~G~-l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~-~~~------------ 293 (538)
T 4bc3_A 235 CLGACAPHLE---EKLS----PPVPSCSVVGA-ISSYYVQRYGFPPGCKVVAFTGDNPASLAGM-RLE------------ 293 (538)
T ss_dssp HHHHHCTTHH---HHHC----CCBCSSCEEEE-CCHHHHHHHCCCTTCEEECCEEHHHHHHHHT-TCC------------
T ss_pred HHHHhCccHH---HHCC----Ccccccccccc-cCHHHHHHhCCCCCCeEEEecccHHhhhhcc-ccC------------
Confidence 99999998 4 2346 78899999998 9999999999999999999999999999998 643
Q ss_pred hhccceEEEEecccceeeeeeCcccccCcccccccccccCCeeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCH
Q 006707 346 EAICHRMVLVCGTSTCHMAVSRNKLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSL 425 (634)
Q Consensus 346 g~~~g~~~is~GTs~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~ 425 (634)
+|++++++|||+++++++++|..++... .+++...++.|+.++++++||.+++|+++.+. ...
T Consensus 294 ---~g~~~~s~GTs~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gg~~~~w~~~~~~-------------~~~ 356 (538)
T 4bc3_A 294 ---EGDIAVSLGTSDTLFLWLQEPMPALEGH-IFCNPVDSQHYMALLCFKNGSLMREKIRNESV-------------SRS 356 (538)
T ss_dssp ---TTCEEEEESSSEEEEEEESSCCCCSSSE-EEEETTEEEEEEEEEEESSSHHHHHHHHHHHS-------------TTC
T ss_pred ---CCcEEEEeccchheEEecCCCCCCCCcc-eEEeecCCCCEEEeehhhccchHHHHHHHHhc-------------CCC
Confidence 4789999999999999999887766432 34433345679999999999999999998763 145
Q ss_pred HHHHHHHHHhhhhhcCCCCccCCCCcEEEecCCCCCCCCCCCCCcceeee------CCCCCCCHHHHHHHHHHHHHHHHH
Q 006707 426 FELLNGTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIIC------GMTLDSSEKQLALLYLATVQGIAY 499 (634)
Q Consensus 426 ~~~l~~~~~~~~~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~~~------Gl~~~~~~~~~~~~~rAvlEgia~ 499 (634)
|++|++++++ +|+|++|++|+|||+|+|+|+ ++|.|. |++. +++.| ++||++||++|
T Consensus 357 ~~~l~~~a~~---------~~~g~~gl~~lp~~~Ger~P~----~~G~~~~~~~~~g~~~-~~~~~---l~RAvlEgia~ 419 (538)
T 4bc3_A 357 WSDFSKALQS---------TEMGNGGNLGFYFDVMEITPE----IIGRHRFNTENHKVAA-FPGDV---EVRALIEGQFM 419 (538)
T ss_dssp HHHHHHHHHT---------SCTTGGGCEEEEESSCCSSSC----CCEEEEECTTSCEESC-CCHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHhc---------CCCCCCCeEEeecCCCCcCCC----CCceeeeccccccccC-CCHHH---HHHHHHHHHHH
Confidence 8889998876 447999999999999999996 445554 2232 66777 66799999999
Q ss_pred HHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCC--CCCHHHHHHHhh
Q 006707 500 GTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKR--YSSLIEAMKAMN 577 (634)
Q Consensus 500 ~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~--~~~~~e~~~~~~ 577 (634)
++|.+++.|++.+.++++|+++||++||++|+||+|||||+||+++...|++|+|||++|++++|. |+|++|+.+.++
T Consensus 420 ~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~ea~~~~~ 499 (538)
T 4bc3_A 420 AKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVIDTANSACVGSAYRAFHGLAGGTDVPFSEVVKLAP 499 (538)
T ss_dssp HHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEECCCTTHHHHHHHHHHHHHHHTGGGSCHHHHHTTSC
T ss_pred HHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEecCCCCchHHHHHHHHHHHhCcccCCCHHHHHHhhc
Confidence 999999999877778899999999999999999999999999999999999999999999999998 899999988888
Q ss_pred hcCcEEeechhhHHhhhHHhccccchhhhhhhhHHhhhh
Q 006707 578 AAGQVCMTVGFYLLTYLYLVYITRDKEAKICQLILCFFS 616 (634)
Q Consensus 578 ~~~~~~~P~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 616 (634)
+..++|+|.+...+.|..++ ++|+++.+.++..++
T Consensus 500 ~~~~~~~P~~~~~~~Y~~~y----~~y~~l~~~~~~~~~ 534 (538)
T 4bc3_A 500 NPRLAATPSPGASQVYEALL----PQYAKLEQRILSQTR 534 (538)
T ss_dssp CCEEEECCCTTHHHHHHHHH----HHHHHHHHHHHHHC-
T ss_pred CCCeeECCCHHHHHHHHHHH----HHHHHHHHHHHHHhc
Confidence 88899999888777777744 346666666666543
No 13
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=100.00 E-value=3.4e-82 Score=706.57 Aligned_cols=465 Identities=18% Similarity=0.259 Sum_probs=406.2
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccc-cCCCccccCHHHHHHHHHHHHHHHHHHc--CCCCCCeEEEEecC
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLA--NVDGEEVKGVGFAA 131 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~-~~~g~~eqdp~~~~~a~~~~l~~~l~~~--~~~~~~I~aIgis~ 131 (634)
+++||||+|||++|++++|.+|+++++.+++++.. +.+||.||||++||+++.+++++++++. +++..+|.+|||++
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~~~i~~Igis~ 83 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYTSVIIKCIGITN 83 (503)
T ss_dssp EEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred cEEEEEEeCCcceEEEEECCCCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCCccceEEEEEcC
Confidence 58999999999999999999999999999999864 4899999999999999999999998875 56667899999999
Q ss_pred C-ceeEEEcCC-CCceeeccCCCCCcceeEecccchHHHHHHHhcCC--hhHHHHhCCCCCCCChHHHHHHHHHhchhhH
Q 006707 132 T-CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESW 207 (634)
Q Consensus 132 ~-~~~V~~d~~-G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~ 207 (634)
| |++++||++ |+|+ +|+|.|+|.|+.++++++.+.. +.++++||+++++.++++||+|+++|+||+|
T Consensus 84 ~~~~~~~~D~~~G~~l---------~~~i~w~D~r~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~ 154 (503)
T 2w40_A 84 QRETVIIWDRITGKPL---------YNAIVWLDTRVEELVTEFSAKYNNNDIQKKTGTYFNTYFSAFKILWLIQNNPEIK 154 (503)
T ss_dssp CSSCEEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHHSCHHHHHHHHSSCCCSSSHHHHHHHHHHHCHHHH
T ss_pred CcceEEEEECCCCcCC---------ccceeecccCcHHHHHHHHhccchHHHHHHhCCCCCcccHHHHHHHHHHhChHHH
Confidence 8 999999998 9999 8999999999999999998764 5789999999999999999999999999999
Q ss_pred Hhhce----eecchhHHHhhhhCCCccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCC-Cccccccc
Q 006707 208 SMVFR----WMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLG-DLIDGHHA 282 (634)
Q Consensus 208 ~~~~~----~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~-~~l~~~lp 282 (634)
+++++ |++++|||.|+|||+...+|.|+ ||+|++ ||+++++||+++|+.+||| .. +||
T Consensus 155 ~~~~~~~~~~~~~~d~l~~~LTG~~~~~d~s~--------As~t~l------~d~~~~~W~~~ll~~~gi~~~~---~lP 217 (503)
T 2w40_A 155 QKIDDGTAVIGNINTWLIFNLTKGNCYTDVTN--------ASRTLL------MDINTLQWDEKMCKIFNITNMS---VLP 217 (503)
T ss_dssp HHHHTTCEEEEEHHHHHHHHHHTSCCEEEHHH--------HTTTTC------BCTTTCSBCHHHHHHTTCCCGG---GSC
T ss_pred HHHhcCCeEEECHHHHHHHHHcCCCccccHHH--------hhhhcC------ccCCCCccCHHHHHHcCCChHH---HCC
Confidence 99998 99999999999999522355553 455664 6999999999999999999 63 346
Q ss_pred ccCcccccCCCcccCCCCHHHHHHcCCCC--CCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccc
Q 006707 283 KIGRSVAFPGHPLGSGLTPAAAKELGLVP--GTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTST 360 (634)
Q Consensus 283 ~l~~~~~~~g~~iG~~i~~~~a~~~GL~~--g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~ 360 (634)
+++++++++|+ |+++ .+| + ||||++|++|++|+++|+ +..+ +|++++++|||+
T Consensus 218 ----~i~~~~~~~G~-~~~~---~~g--~~~g~pV~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~ 272 (503)
T 2w40_A 218 ----EIKSNCSNFGL-VKSE---HVP--DYLNIPITGCIGDQQSACIGQ-AIFD--------------EGEAKCTYGTGV 272 (503)
T ss_dssp ----EEECSEEEEEE-CCCT---TSG--GGTTCEEEEEEEHHHHHHHHT-TCCS--------------TTCEEEEESSSE
T ss_pred ----CccCCcCceee-ccHH---HcC--CCCCceEEEECchHHHHHHhC-CCCC--------------CCcEEEEechhh
Confidence 78889999998 9986 577 7 999999999999999998 5443 378999999999
Q ss_pred eeeeeeC-cccccC-cccccccccccCC----eeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHH
Q 006707 361 CHMAVSR-NKLFIP-GVWGPFWSAMVPK----FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLE 434 (634)
Q Consensus 361 ~~~~~~~-~p~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~ 434 (634)
++.+.++ +|..++ +.+..++ +..++ .|+.+++++++|.+++||++ +... ..|++++++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~g~~~~~g~~~~w~~~-~~~~------------~~~~~l~~~a~ 338 (503)
T 2w40_A 273 FLLINTGEKVVYSTCGLITTIC-YKFNDNDKPKYALEGSIGTAGSGVSWLLK-NKLI------------DDPSEASDIME 338 (503)
T ss_dssp EEEEECTTSCCCCSSSCEEEEE-ECCSTTSCCEEEEEEEESCSHHHHHHHHH-TTSS------------SCGGGHHHHHH
T ss_pred eeeeecCCccccCCCCceeEEE-eecCCCCCceEEEechhhhhHhHHHHHHH-hCCc------------CCHHHHHHHHh
Confidence 9998886 466554 3322232 33444 89999999999999999999 7531 23567887776
Q ss_pred hhhhhcCCCCccCCCCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCC
Q 006707 435 SMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGH 513 (634)
Q Consensus 435 ~~~~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~-~g~ 513 (634)
+. ++++|++|+|+|.|+|+|+||+++||.|+|++..|++.| ++||++||++|++|.+++.|++ .|.
T Consensus 339 ~~----------~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~---l~rAvlEgia~~~~~~~~~l~~~~g~ 405 (503)
T 2w40_A 339 KC----------ENTTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSH---IVRALLEGIAFQLNEIVDSLTSDMGI 405 (503)
T ss_dssp HC----------CSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hC----------CCCCCEEEecCCCCCCCCCCCCCCcEEEECCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 52 368999999999999999999999999999999999988 5679999999999999999976 577
Q ss_pred Cc-cEEEEecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCCCHHHHHHHhhhcCcEEeechhhHHh
Q 006707 514 KI-DTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVCMTVGFYLLT 592 (634)
Q Consensus 514 ~~-~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~~~~e~~~~~~~~~~~~~P~~~~~~~ 592 (634)
++ ++|+++||++||++|+|++||++|+||+++...|++|+|||++|++++|.|+|++|+.+.+++..++|+|.+.. +.
T Consensus 406 ~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~~~~e~~alGaA~la~~~~G~~~~~~~~~~~~~~~~~~~~P~~~~-~~ 484 (503)
T 2w40_A 406 EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVSKYKEVTSLGAAVLAGLEVKIWDSLDSVKSLLRRSDAVFHSKMDD-KK 484 (503)
T ss_dssp SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTCSSCHHHHHHHHTCEEEEECCCSCH-HH
T ss_pred CccceEEEeCccccCHHHHHHHHHHHCCeEEecCCCcchHHHHHHHHHHHhCccCCHHHHHHhccCCCcEEccCCCH-HH
Confidence 88 99999999999999999999999999999999999999999999999999999999988778888999998665 66
Q ss_pred hhHHhc
Q 006707 593 YLYLVY 598 (634)
Q Consensus 593 y~~~~~ 598 (634)
|..++.
T Consensus 485 y~~~y~ 490 (503)
T 2w40_A 485 RKKKTS 490 (503)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666444
No 14
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=100.00 E-value=4.2e-82 Score=704.86 Aligned_cols=463 Identities=22% Similarity=0.303 Sum_probs=404.4
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC-
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT- 132 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~-~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~- 132 (634)
+++||||+|||++|++++|.+|+++++.+++++.. +.+||+||||++||+++++++++++++.+++..+|.+|||++|
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~i~~Igis~~~ 82 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTNQR 82 (497)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECS
T ss_pred cEEEEEecCCchhEEEEECCCCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEecCC
Confidence 68999999999999999999999999999999864 4899999999999999999999999887777788999999998
Q ss_pred ceeEEEcCCCCceeeccCCCCCcceeEecccchHHHHHHHhcCC-hhHHHHhCCCCCCCChHHHHHHHHHhchhhHHhhc
Q 006707 133 CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN-SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVF 211 (634)
Q Consensus 133 ~~~V~~d~~G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~-~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~ 211 (634)
|++|+||++|+|+ +|+|.|+|.|+.++++++++.. ++++++||+++++.++++||+|+++|+||+|+++.
T Consensus 83 ~~~v~~D~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~ 153 (497)
T 2zf5_O 83 ETTLVWDKDGKPL---------YNAIVWQCRRTAEMVEEIKREYGTMIKEKTGLVPDAYFSASKLKWLLDNVPGLREKAE 153 (497)
T ss_dssp SCEEEECTTCCBS---------SCEECTTCCTTHHHHHHHHHHHHHHHHHHHSSCCCTTSHHHHHHHHHHHSTTHHHHHH
T ss_pred CcEEEECCCCCCc---------ccceeecccCcHHHHHHHHhhhHHHHHHHhCCCCCchhHHHHHHHHHHcCHHHHHHHh
Confidence 9999999999999 8999999999999999998753 56899999999999999999999999999999998
Q ss_pred e----eecchhHHHhhhhCCCccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCcccccccccCcc
Q 006707 212 R----WMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRS 287 (634)
Q Consensus 212 ~----~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~lp~l~~~ 287 (634)
+ |++++|||.|+|||+.. +|.| +||+|++ ||+++++||+++|+.+||+.. .|| +
T Consensus 154 ~~~~~~~~~~d~l~~~LTG~~~-td~s--------~As~t~l------~d~~~~~W~~~ll~~~gi~~~---~lP----~ 211 (497)
T 2zf5_O 154 KGEVMFGTVDTFLIYRLTGEHV-TDYS--------NASRTML------FNIKKLDWDDELLELFDIPES---VLP----E 211 (497)
T ss_dssp TTCCEEEEHHHHHHHHHHSCCE-EEHH--------HHTTSSS------EETTTTEECHHHHHHTTCCGG---GCC----E
T ss_pred cCCCEEEcHHHHHHHHHhCCee-eeHH--------HhhhhcC------ccCCCCCcCHHHHHHcCcCHH---HCC----C
Confidence 8 99999999999999764 4555 3455654 589999999999999999974 346 7
Q ss_pred cccCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccceeeeeeC
Q 006707 288 VAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSR 367 (634)
Q Consensus 288 ~~~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~~~~~~~~ 367 (634)
++++++++|+ ++++ .+| +||||++|++|++|+++|+ +..+ +|++++++|||+++.+.++
T Consensus 212 i~~~~~~~G~-~~~~---~~g--~g~pV~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~~~~~~~~ 270 (497)
T 2zf5_O 212 VRESSEVYGY-TKKE---LLG--AEIPVSGDAGDQQAALFGQ-AAFE--------------AGMVKATYGTGSFILVNTD 270 (497)
T ss_dssp EECSEEEEEE-CCHH---HHS--SCCEEEEEEEHHHHHHHHT-TCCS--------------TTCEEEEESSSEEEEEEEE
T ss_pred cCCCCCeeee-cCHH---HcC--CCCeEEEEccHHHHHHHhC-CCCC--------------CCcEEEEcchhheeeEECC
Confidence 8899999998 9987 588 8999999999999999998 4443 3789999999999999888
Q ss_pred cccccC-cccccccccccC--CeeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhhcCCCC
Q 006707 368 NKLFIP-GVWGPFWSAMVP--KFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPF 444 (634)
Q Consensus 368 ~p~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~p~ 444 (634)
+|..++ +....++ +..+ +.|+.+++++++|.+++|+++.+.. ...|+++++++++
T Consensus 271 ~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~G~~~~w~~~~~~~------------~~~~~~l~~~a~~--------- 328 (497)
T 2zf5_O 271 KMVLYSDNLLTTIA-WGLNGRVSYALEGSIFVTGAAVQWLRDGIKI------------IKHASETEELATK--------- 328 (497)
T ss_dssp TCCCCCTTSEEEEE-EEETTEEEEEEEEEESCSHHHHHHHHHTSCC------------CSCGGGHHHHHTT---------
T ss_pred CCccCCCCcEEEEE-EEcCCCCEEEEechhhhHHHHHHHHHHHhCC------------CCcHHHHHHHHhh---------
Confidence 876554 3322232 2333 3799999999999999999998742 1235667776654
Q ss_pred ccCCCCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCC
Q 006707 445 VAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGL 524 (634)
Q Consensus 445 ~~~g~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~ 524 (634)
+ ++++|++|+|+|.|+|+|+||+++||.|+|++..|++.| ++||++||++|.+|++++.|++.+ ++++|+++||+
T Consensus 329 ~-~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~---l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~ 403 (497)
T 2zf5_O 329 L-ESNEGVYFVPAFVGLGAPYWDQFARGIIIGITRGTGREH---LARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGA 403 (497)
T ss_dssp S-SSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHH---HHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGG
T ss_pred C-CCCCceEEecCcCCCCCCCCCCCCCEEEEeCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCcc
Confidence 2 368999999999999999999999999999999999988 557999999999999999998877 88999999999
Q ss_pred CCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCCCHHHHHHHhhhcCcEEeechhhHHhhhHHhc
Q 006707 525 AKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVCMTVGFYLLTYLYLVY 598 (634)
Q Consensus 525 a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~~~~e~~~~~~~~~~~~~P~~~~~~~y~~~~~ 598 (634)
+||++|+||+||++|+||+++...|++|+|||++|++++|.|++++|+ .++++..++|+|.+.. +.|..++.
T Consensus 404 a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA~~~~g~~~~~~~~-~~~~~~~~~~~P~~~~-~~y~~~y~ 475 (497)
T 2zf5_O 404 TANDFLMQFQADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREI-AELWKAERIFEPKMDE-KTRERLYK 475 (497)
T ss_dssp GGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTSSCCHHHH-HTTCCEEEEECCCCCH-HHHHHHHH
T ss_pred ccCHHHHHHHHhhcCCeEEEcCCCcchHHHHHHHHHHHhCccCCHHHH-HHhcCCCeEECCCccH-HHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 4666778999998654 55555433
No 15
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=100.00 E-value=1.3e-81 Score=701.91 Aligned_cols=466 Identities=20% Similarity=0.310 Sum_probs=405.1
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC-
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT- 132 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~-~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~- 132 (634)
+|+||||+|||++|++++|.+|+++++.+++++.. +.+||+||||++||+++++++++++++.+++..+|.+|||++|
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis~~g 81 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHEDIAAVGITNQR 81 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECS
T ss_pred CEEEEEecCCcceEEEEECCCCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCcccEEEEEEeCCC
Confidence 48999999999999999999999999999999864 4899999999999999999999999987776788999999998
Q ss_pred ceeEEEcCC-CCceeeccCCCCCcceeEecccchHHHHHHHhcCC--hhHHHHhCCCCCCCChHHHHHHHHHhchhhHHh
Q 006707 133 CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSM 209 (634)
Q Consensus 133 ~~~V~~d~~-G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~ 209 (634)
|++|+||++ |+|+ +|+|.|+|.|+.++++++.+.. ++++++||+++++.++++||+|+++|+||+|++
T Consensus 82 ~~~v~vD~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 152 (504)
T 2d4w_A 82 ETAVVWDKTTGKPV---------YNAIVWQDTRTQKIVDELGGDEGAEKYKSIVGLPLATYFSGPKIKWILDNVEGAREK 152 (504)
T ss_dssp SCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHCSSCGGGGHHHHSCCSCTTSHHHHHHHHHHHSTTHHHH
T ss_pred CeEEEEECCCCCCc---------cccceecccChHHHHHHHHhhcchHHHHHHhCCCCCchhHHHHHHHHHHcChhHHHH
Confidence 999999998 9999 8999999999999999998743 679999999999999999999999999999999
Q ss_pred hce----eecchhHHHhhhhC--C---CccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCccccc
Q 006707 210 VFR----WMDLSDWLSYRATG--D---DTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGH 280 (634)
Q Consensus 210 ~~~----~~~~~dyl~~~LTG--~---~~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~ 280 (634)
+.+ |++++|||.|+||| + . .+|.| +||+|++ ||+++++||+++|+.+||+.. +
T Consensus 153 ~~~~~~~~~~~~d~l~~~LTG~~~~~~~-~~d~s--------~As~t~l------~d~~~~~W~~~ll~~~gi~~~---~ 214 (504)
T 2d4w_A 153 AEKGDLLFGNTDTWVLWNMTGGTEGGVH-VTDVT--------NASRTML------MDLDTLSWREDIAADMGIPLS---M 214 (504)
T ss_dssp HHHTCEEEECHHHHHHHHHTTTTTTCCC-EEEHH--------HHTTTTC------EETTTTEECHHHHHHTTCCGG---G
T ss_pred HhcCCeEEecHHHHHHHHhcCCCcCCce-eeehh--------hhhhhcC------ccCCCCccCHHHHHHhCCCHH---H
Confidence 988 99999999999999 4 4 35555 3556664 589999999999999999974 3
Q ss_pred ccccCcccccCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccc
Q 006707 281 HAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTST 360 (634)
Q Consensus 281 lp~l~~~~~~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~ 360 (634)
|| +++++++++|+ ++++ +.+| + |||++|++|++|+++|+ +..+ +|++++++|||+
T Consensus 215 lP----~i~~~~~~~G~-~~~~--~~~G--~-~pV~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~ 269 (504)
T 2d4w_A 215 LP----DIRSSSEVYGH-GRPR--GLVP--G-VPIAGILGDQQAATFGQ-ACFE--------------VGQAKNTYGTGN 269 (504)
T ss_dssp SC----EEECSEEEEEE-CCTT--SSST--T-CEEEEEEEHHHHHHHHT-TCCS--------------TTEEEEEESSSE
T ss_pred CC----CccCCccceec-cchH--HhCC--C-CeEEEECCcHHHHHhhC-CCCC--------------CCcEEEEcchhh
Confidence 47 78899999998 9875 3578 6 99999999999999998 4443 478999999999
Q ss_pred eeeeeeC-cccccC-cccccccccccCC---eeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHh
Q 006707 361 CHMAVSR-NKLFIP-GVWGPFWSAMVPK---FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLES 435 (634)
Q Consensus 361 ~~~~~~~-~p~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~ 435 (634)
++++.++ +|..++ +.+..++ +..++ .|+.+++++++|.+++||++.+... ..|+++++++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~------------~~~~~l~~~a~~ 336 (504)
T 2d4w_A 270 FLLLNTGTEKVMSKNGLLTTVC-YKIGDAPAVYALEGSIAVTGSLVQWLRDNLGMF------------EDAPDVEWLAGK 336 (504)
T ss_dssp EEEEECTTSCCCCSSSCEEEEE-ECCTTSCCEEEEEEEESCSHHHHHHHHHTTCTT------------TTCSCTHHHHTT
T ss_pred eeeeecCCccccCCCCcEEEEE-EEcCCCCceEEEcchhhhHHHHHHHHHHHhCCC------------CCHHHHHHHHhh
Confidence 9998885 566554 3332232 33445 8999999999999999999987521 234567777654
Q ss_pred hhhhcCCCCccCCCCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCC
Q 006707 436 MIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHK 514 (634)
Q Consensus 436 ~~~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~-~g~~ 514 (634)
+ ++++|++|+|+|.|+|+|+||+++||.|+|++..|++.| ++||++||++|++|++++.|++ .|.+
T Consensus 337 ---------~-~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~---l~rAvlEgia~~~~~~~~~l~~~~g~~ 403 (504)
T 2d4w_A 337 ---------V-QDNGGAYFVPAFSGLFAPYWRPDARGALVGLTRYVNRNH---IARAALEATAFQSREVVDAMNADSGVD 403 (504)
T ss_dssp ---------S-SSCTTCEEECTTCCCSTTTCCCCSCEEEEEECSSCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred ---------C-CCCCCEEEecCCCCCCCCCCCCCCCEEEEeCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2 368899999999999999999999999999999999988 5679999999999999999976 5788
Q ss_pred ccEEEEecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCCCHHHHHHHhhhcCcEEeechhhHHhhh
Q 006707 515 IDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVCMTVGFYLLTYL 594 (634)
Q Consensus 515 ~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~~~~e~~~~~~~~~~~~~P~~~~~~~y~ 594 (634)
+++|+++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|+|++|+. ++++..++|+|.+.. +.|.
T Consensus 404 ~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA~~~~G~~~~~~~~~-~~~~~~~~~~P~~~~-~~y~ 481 (504)
T 2d4w_A 404 LTELRVDGGMVANELLMQFQADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDVI-DNWAEDKRWSPSMES-GERE 481 (504)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHHTSSCSHHHHH-HHCCEEEEECCCSCH-HHHH
T ss_pred cceEEEeCCcccCHHHHHHHHHHhCCeEEeCCCCcchHHHHHHHHHhhcCccCCHHHHH-hhcCCCeEEccCCCH-HHHH
Confidence 89999999999999999999999999999999999999999999999999999999984 677778999998665 6666
Q ss_pred HHhccc
Q 006707 595 YLVYIT 600 (634)
Q Consensus 595 ~~~~~~ 600 (634)
.++..|
T Consensus 482 ~~y~~~ 487 (504)
T 2d4w_A 482 RLYRNW 487 (504)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 654433
No 16
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=4.1e-81 Score=696.56 Aligned_cols=462 Identities=23% Similarity=0.332 Sum_probs=402.2
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC-
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT- 132 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~-~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~- 132 (634)
+|+||||+|||++|++++|.+|+++++.+.+++.. +.+||+||||++||+++.+++++++++.+++..+|.+|||++|
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis~~~ 81 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEAGEVLALGITNQR 81 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEECS
T ss_pred cEEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEeCCC
Confidence 47999999999999999999999999999999864 5899999999999999999999999987776788999999998
Q ss_pred ceeEEEcCC-CCceeeccCCCCCcceeEecccchHHHHHHHhcCC--hhHHHHhCCCCCCCChHHHHHHHHHhchhhHHh
Q 006707 133 CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSM 209 (634)
Q Consensus 133 ~~~V~~d~~-G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~ 209 (634)
|++++||++ |+|+ +|.|.|+|.|+.++++++.+.. +.++++||+++++.++++||+|+++|+||+|++
T Consensus 82 ~~~~~vD~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 152 (495)
T 2dpn_A 82 ETTLLWDRKTGKPL---------HNAIVWQDRRTTPLCEALRAKGLEPLFRERTGLLFDPYFSGTKLVWLLENVPGLKAR 152 (495)
T ss_dssp SCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHTSCCSCTTSHHHHHHHHHHHSSSHHHH
T ss_pred ccEEEEECCCCcCC---------ccceeecccChHHHHHHHHhccchhHHHHHhCCCCCchhHHHHHHHHHHcCHHHHHH
Confidence 999999998 9999 8999999999999999998864 578999999999999999999999999999999
Q ss_pred hce----eecchhHHHhhhhC--CCccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCcccccccc
Q 006707 210 VFR----WMDLSDWLSYRATG--DDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 283 (634)
Q Consensus 210 ~~~----~~~~~dyl~~~LTG--~~~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~lp~ 283 (634)
+++ |++++|||.|+||| +. .+|.|+ ||+|++ ||+++++||+++|+.+||+.. +||
T Consensus 153 ~~~~~~~~~~~~d~l~~~LTG~~~~-~~d~s~--------As~t~l------~d~~~~~W~~~ll~~~gi~~~---~lP- 213 (495)
T 2dpn_A 153 AEGGGVAFGTVDTWLIWNLTGGKVH-ATDPTN--------ASRTLL------FNLHTLAWDPELLEALGIPAA---LLP- 213 (495)
T ss_dssp HHHTCEEEECHHHHHHHHHTTTSCC-EECHHH--------HTTSSS------EETTTTEECHHHHHHTTCCST---TCC-
T ss_pred HhcCCcEEECHHHHHHHHhcCCCeE-EEehHH--------hHhhcC------ccCccCCcCHHHHHHcCCCHH---HCC-
Confidence 988 99999999999999 54 355554 455664 589999999999999999974 347
Q ss_pred cCcccccCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccceee
Q 006707 284 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 363 (634)
Q Consensus 284 l~~~~~~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~~~~ 363 (634)
+++++++++|+ ++++ .+| +||||++|++|++|+++|+ +..+ +|++++++|||+++.
T Consensus 214 ---~i~~~~~~~G~-~~~~---~~G--~g~pV~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~~~~ 269 (495)
T 2dpn_A 214 ---EVRPSDGDFGE-TLPE---LLG--APVPIRGVLGDQQAALFGQ-AALG--------------GGEGKCTYGTGAFLL 269 (495)
T ss_dssp ---EECCTTSCCCB-CCHH---HHS--SCCBEEEEEEHHHHHHHHT-TCCS--------------TTCEEEEESSSEEEE
T ss_pred ---CccCCCCeeEe-ccHH---HcC--CCCeEEEECcHHHHHHHhC-CCCC--------------CCcEEEEccHhhhhh
Confidence 78889999998 9987 588 8999999999999999998 4443 478999999999998
Q ss_pred eeeC-cccccC-cccccccccccCC--eeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhh
Q 006707 364 AVSR-NKLFIP-GVWGPFWSAMVPK--FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHE 439 (634)
Q Consensus 364 ~~~~-~p~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~ 439 (634)
+.++ +|..++ +....++ +..++ .|..+++++++|.+++|+++ +... ..|+++++++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~g~~~~w~~~-~~~~------------~~~~~l~~~a~~---- 331 (495)
T 2dpn_A 270 LNTGKRPVLSEKGLLATVA-WSLGGRATYALEGSLFVAGAAVGWLKE-VGLI------------RESAEVEALAAS---- 331 (495)
T ss_dssp EECTTSCCCCSSSCEEEEE-EEETTEEEEEEEEEESCSHHHHHHHHH-TTSS------------SSTTTHHHHHHT----
T ss_pred hhcCCccccCCCCceEEEE-EEcCCCCEEEEechHHhHHHHHHHHHH-cCCc------------cCHHHHHHHHhh----
Confidence 8885 465544 3322222 23343 79999999999999999999 7531 235667777765
Q ss_pred cCCCCccCCCCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCccEE
Q 006707 440 RNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHKIDTL 518 (634)
Q Consensus 440 ~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~-~g~~~~~I 518 (634)
+ ++++|++|+|+|.|+|+|+||+++||.|+|++..|++.| ++||++||++|.+|.+++.|++ .|.++++|
T Consensus 332 -----~-~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~---~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i 402 (495)
T 2dpn_A 332 -----V-EDTGDVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAH---LARAALEGVAFQVRDVVLAMEEEAGVRLKVL 402 (495)
T ss_dssp -----C-SCCSSCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHH---HHHHHHHHHHHHHHHHHHHHHTTTSCCCCCE
T ss_pred -----C-CCCCcEEEecCCCCCCCCCCCCCCceEEEecCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 2 368899999999999999999999999999999999988 5579999999999999999986 47788999
Q ss_pred EEecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCCCHHHHHHHhhhcCcEEeechhhHHhhhHHhc
Q 006707 519 LACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVCMTVGFYLLTYLYLVY 598 (634)
Q Consensus 519 ~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~~~~e~~~~~~~~~~~~~P~~~~~~~y~~~~~ 598 (634)
+++||++||++|+|++||++|+||+++...|++|+|||++|++++|.| |++|+ .++++..++|+|.+.. +.|..++.
T Consensus 403 ~~~GG~a~n~~~~q~~Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~-~~~~~-~~~~~~~~~~~P~~~~-~~y~~~~~ 479 (495)
T 2dpn_A 403 KADGGMAQNRLFLKIQADLLGVPVAVPEVTETTALGAALMAGVGAGAL-SPEDV-AGRFREAERFLPTMPE-GRREALYR 479 (495)
T ss_dssp EEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHHTSC-CHHHH-HHHCCEEEEECCCSCH-HHHHHHHH
T ss_pred EEecccccCHHHHHHHHHHhCCeeEecCCcccHHHHHHHHHHhhcCcC-CHHHH-HHhcCCCeEEccCCCH-HHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 99998 4666778999998665 66666444
No 17
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00 E-value=3.9e-81 Score=698.06 Aligned_cols=446 Identities=20% Similarity=0.237 Sum_probs=391.3
Q ss_pred CcEEEEEecCCcccEEEEEc-CCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 54 RSVFLGVDVGTGSARAGLFD-ESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d-~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
++|+||||+|||++|++|+| ++|+++++.+.++ +|++||||++||++++++++++ +. ..+|.+|||++|
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~i~~~~~~~~-----~g~~e~d~~~~~~~i~~~l~~~----~~-~~~I~~Igis~q 73 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGELVRFGQAKH-----PNGTSVDPSYWWSAFQEAAEQA----GG-LDDVSALAVGGQ 73 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----CSSSEECTHHHHHHHHHHHHHT----TC-STTEEEEEEEEC
T ss_pred CcEEEEEEeccccEEEEEEECCCCeEEEEEEEeC-----CCCceECHHHHHHHHHHHHHhc----CC-ccCceEEEEeCC
Confidence 46999999999999999999 8999999998887 4889999999999988877653 33 578999999998
Q ss_pred -ceeEEEcCCCCceeeccCCCCCcceeEecccchHHHHHHHhcCC------------------hhHHHHhCCCCCCCChH
Q 006707 133 -CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN------------------SPVLQYCGGAVSPEMQP 193 (634)
Q Consensus 133 -~~~V~~d~~G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~------------------~~~~~~tG~~~~~~~~~ 193 (634)
|++|+||++|+|+ +|+|+|+|+|+.++++++++.. ++++++||+++++.+++
T Consensus 74 ~~~~v~~D~~G~pl---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~ 144 (515)
T 3i8b_A 74 QHGMVILDNQGNVI---------RDAMLWNDTSSAPQAAALIEKLGAAPAQDGEPEDPIARGKQRWVKAVGSSPVASYTL 144 (515)
T ss_dssp SSCBEEECTTSCBC---------SCEECTTCCTTHHHHHHHHHHHHCSCCCTTCCSSHHHHHHHHHHHHHSSCCCTTSHH
T ss_pred cceEEEECCCCCCc---------CCcceecCCCHHHHHHHHHHhcCcccccccccccccchhHHHHHHHHCCCCCchhHH
Confidence 9999999999999 8999999999999999998753 57899999999999999
Q ss_pred HHHHHHHHhchhhHHhhceeecchhHHHhhhhCCC------------ccccccccccccccccchhhhccccccCCCcCC
Q 006707 194 PKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDD------------TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEAC 261 (634)
Q Consensus 194 ~kl~wl~~~~Pe~~~~~~~~~~~~dyl~~~LTG~~------------~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~ 261 (634)
+||+|+++|+||+|+++.+|++++|||.|+|||+. ..+|.| +||+|++ ||++++
T Consensus 145 ~kl~Wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~~~~~~~~~~~~~~td~s--------~As~t~l------~d~~~~ 210 (515)
T 3i8b_A 145 TKVAWVAENEPENVKKIAAICLPHDWLSWRIAGYGPVAEGEDAHLEALFTDRS--------DASGTIY------YDAASN 210 (515)
T ss_dssp HHHHHHHHHCHHHHTTCSEEECHHHHHHHHHTTCCCCCTTSCCCGGGCEEEHH--------HHTTSSS------EETTTT
T ss_pred HHHHHHHHcChHHHHHHheecCHHHHHHHHhcCCCcccccccccccceeecHH--------HhhcccC------eeCCcC
Confidence 99999999999999999999999999999999982 234554 4556664 589999
Q ss_pred CCCHHHHHHc-CCC-----------CcccccccccCcccccCCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhcc
Q 006707 262 GWDDEFWEEI-GLG-----------DLIDGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGV 329 (634)
Q Consensus 262 ~Ws~~~L~~~-gi~-----------~~l~~~lp~l~~~~~~~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~ 329 (634)
+||+++|+.+ ||+ . ++|| +++++++++|+ |++++|+++||++||||++|++|++|+++|+
T Consensus 211 ~W~~~ll~~~~gi~~~~~~~~~~~~~---~~LP----~i~~~~~~~G~-v~~~~A~~~Gl~~g~pV~~g~~D~~aa~lG~ 282 (515)
T 3i8b_A 211 EYRRDLIAMVLEAAEGAKAAQSHAEA---IVLP----TVLGPRDAAPV-KADPAIAGKNVEGGCLLAPGGGDNAMASLGL 282 (515)
T ss_dssp EECHHHHHHHHHHHHCHHHHHHHHHH---SBCC----EEECTTCCCSS-CCCTTTTTTTSTTCCEECCCEEHHHHHHHHT
T ss_pred ccCHHHHHhhcCCCcccccccccchH---HHCC----CCcCCcCcccC-cCHHHHHHhCCCCCCeEEEECchHHHHHhhC
Confidence 9999999998 997 3 2346 78899999998 9999999999999999999999999999998
Q ss_pred ccccCcccchhchhhhhhccceEEEEecccceeeeeeCcccccC-cccccccccccCCeeEecccccchhhHHHHHHHhh
Q 006707 330 MESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRNKLFIP-GVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENH 408 (634)
Q Consensus 330 ~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~l~W~~~~~ 408 (634)
+ .+ +|++++++|||+++++++++|..++ +.+..+++ . ++.|+.++++.++|.+++|+++.+
T Consensus 283 -g-~~--------------~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~-~-~g~~~~~~~~~~gg~~l~w~~~~~ 344 (515)
T 3i8b_A 283 -G-MA--------------VGDVSISLGTSGVAAAISENPTYDLTGAVSGFAD-C-TGHYLPLACTINGSRILDAGRAAL 344 (515)
T ss_dssp -T-CC--------------TTEEEEEESSSEEEEECBSSCCCCTTSCSEEEEC-S-SSSEEEEEEESCSTHHHHHHHHHH
T ss_pred -C-CC--------------CCcEEEEechhhhhhcccCccccCCCCcEEeeec-C-CCCEEEeeecccHHHHHHHHHHHh
Confidence 5 43 4799999999999999999887766 33333332 2 788999999999999999999876
Q ss_pred hhhhHHHHHHhhccCCHHHHHHHHHHhhhhhcCCCCccCCCCcEEEecCCCCCCCCCCCCCcceeeeCCCCCC-CHHHHH
Q 006707 409 VASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDS-SEKQLA 487 (634)
Q Consensus 409 ~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~-~~~~~~ 487 (634)
. . .|++|++++++ +|++++|++|+|||.|+|+|+| +++||.|+|++..| ++.|
T Consensus 345 ~-------------~-~~~~l~~~a~~---------~~~g~~gl~~lP~~~Ger~P~~-~~arg~~~Gl~~~~~~~~~-- 398 (515)
T 3i8b_A 345 G-------------V-DYDELAKLAFA---------SKPGANGITLVPYFDGERTPNR-PNATATFSGMTLANTTREN-- 398 (515)
T ss_dssp T-------------C-CHHHHHHHHHH---------SCTTGGGCEEECCTTCBTTTTB-TTCCCEEESCCTTTCSHHH--
T ss_pred C-------------C-CHHHHHHHHHh---------CCCCCCCeEEecCCCCCcCCCC-cCcceEEecCCCCCCCHHH--
Confidence 3 1 37889988876 3478999999999999999976 99999999999999 9988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCC
Q 006707 488 LLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYS 567 (634)
Q Consensus 488 ~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~ 567 (634)
++||++||++|.+|.+++.|++.|.++++|+++||++||++|+||+||+||+||+++...|++|+|||++|++++|.++
T Consensus 399 -l~RAvlEgia~~~r~~l~~l~~~g~~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~ 477 (515)
T 3i8b_A 399 -LARAFVEGLLCSQRDCLELIRSLGASITRILLIGGGAKSEAIRTLAPSILGMDVTRPATDEYVAIGAARQAAWVLSGET 477 (515)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEESGGGGCHHHHHHHHHHHTSCEEEECCCCHHHHHHHHHHHHHHHCCS
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhcCHHHHHHHHHHhCCceEecCCcccHHHHHHHHHHHHcCCCC
Confidence 5679999999999999999998888999999999999999999999999999999999999999999999999999998
Q ss_pred CHHHHHHHhhhcCcEEeechh
Q 006707 568 SLIEAMKAMNAAGQVCMTVGF 588 (634)
Q Consensus 568 ~~~e~~~~~~~~~~~~~P~~~ 588 (634)
++++. ......+++|.++
T Consensus 478 ~~~~~---~~~~~~~~~~~~~ 495 (515)
T 3i8b_A 478 EPPAW---QLTIDGVETGEPT 495 (515)
T ss_dssp SCCCC---CCCEEEEECCCCC
T ss_pred ChhHh---hhhccccCCCCcc
Confidence 77542 1234567777553
No 18
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=8.5e-75 Score=640.69 Aligned_cols=418 Identities=15% Similarity=0.164 Sum_probs=346.3
Q ss_pred CcEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC-
Q 006707 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT- 132 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~- 132 (634)
++|+||||+|||++|++++|++|+++++.+.+++.++.+||+||||++||+++++++++++ + .+|.+|||++|
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~-~-----~~I~aIgis~~~ 78 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA-D-----HPVTTIVPVGHG 78 (482)
T ss_dssp ---CEEEEECSSEEEEEEECTTSCEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT-T-----SCCCEEEEEECS
T ss_pred hceEEEEEcCCCCeEEEEEECCCcEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH-h-----cCCCEEEEecCc
Confidence 4699999999999999999999999999999998777999999999999999999998876 2 57999999998
Q ss_pred ceeEEEcCCCCceeeccCCCCCcceeEecccchHHHHHHHhcCChhHHHHhCCCCCCC--ChHHHHHHHHHhchhhHHhh
Q 006707 133 CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPE--MQPPKLLWVKENLQESWSMV 210 (634)
Q Consensus 133 ~~~V~~d~~G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~~~~~~~tG~~~~~~--~~~~kl~wl~~~~Pe~~~~~ 210 (634)
|++|+|| +|+|+ +|+|+|+|+|+.++++++.+... .+++||++++++ ++++||+|+++|+||+|+++
T Consensus 79 ~~~v~~D-~G~pl---------~~ai~w~D~R~~~~~~~l~~~~~-~~~~tG~~~~~~~~~~~~kl~Wl~~~~Pe~~~~~ 147 (482)
T 3h6e_A 79 AGIAALT-DGRLA---------FPPLDYEQSIPEAVMADYRSQRD-PFARTGSPALPDGLNIGSQLWWLDQLHPDVMANA 147 (482)
T ss_dssp SCEEEEE-TTEEC---------SCCBCTTSCCCHHHHHHHHTTCC-CHHHHCCCCCSTTSSHHHHHHHHHHHSHHHHHSC
T ss_pred CCEEEEC-CCCEe---------ccccccCCcccHHHHHHHHhhCh-HHHHhCCCCCCCchhHHHHHHHHHHcCchhhhcC
Confidence 9999999 99999 89999999999999999988654 389999999998 89999999999999999999
Q ss_pred ceeecchhHHHhhhhCCCccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCcccccccccCccccc
Q 006707 211 FRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVAF 290 (634)
Q Consensus 211 ~~~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~lp~l~~~~~~ 290 (634)
. |++++|||.|+|||+.. +|.|+ .||+|+| ||+++++|| ++|+.+||+ . +|| ++++
T Consensus 148 ~-~l~~~dyl~~~LTG~~~-td~s~-------~As~t~l------~d~~~~~W~-~ll~~~gi~-~---~LP----~v~~ 203 (482)
T 3h6e_A 148 T-LLPWAQYWAWFLTGRAV-SEVTS-------LGCHSDL------WDPQDGDFS-PMAKRLGWA-A---RFA----PIVR 203 (482)
T ss_dssp E-EEEHHHHHHHHTTSCCC-EEHHH-------HTTTCSS------EETTTTEEC-HHHHHTTCG-G---GBC----CEEC
T ss_pred E-EEccHHHHHHHHhCCee-eecch-------hhhccCC------ccCCcCcHH-HHHHHcCCH-H---hCC----CCcC
Confidence 9 99999999999999975 45543 1345554 589999999 599999998 3 346 7889
Q ss_pred CCCcccCCCCHHHHHHcCCCCCCcEEEccchhhhhhhc---cccccCcccchhchhhhhhccce-EEEEecccceeeeee
Q 006707 291 PGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVG---VMESVPESVSEAKENEEEAICHR-MVLVCGTSTCHMAVS 366 (634)
Q Consensus 291 ~g~~iG~~i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g---~~g~~~~g~~~~~~~~~g~~~g~-~~is~GTs~~~~~~~ 366 (634)
+++++|+ |++++|+++||++|+||++|++|++|+++| + ++.++ ++ +++++|||.+++...
T Consensus 204 ~~~~~G~-l~~~~A~~~GL~~g~pV~~g~~D~~aa~lG~~g~-g~~~~--------------g~~~~~s~GT~~~~~~~~ 267 (482)
T 3h6e_A 204 AGDTVGA-LLPAIAERTGLSPDVQVLAGLHDSNAALLAARGF-AEIAD--------------NEATVLSTGTWFIAMRLP 267 (482)
T ss_dssp TTSEEEE-CCHHHHHHHTCCTTCEEECCEEHHHHHHHHHTTS-TTTTT--------------SSEEEEECSSSEEEEEEC
T ss_pred CCceeee-eCHHHHHHhCCCCCCEEEEeCcHHHHHHhhhhcc-CCcCC--------------CCEEEEECCceeEEEEec
Confidence 9999998 999999999999999999999999999999 7 44432 44 689999998766555
Q ss_pred C---c-ccccCcccccccccccCCeeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhhcCC
Q 006707 367 R---N-KLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNS 442 (634)
Q Consensus 367 ~---~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~ 442 (634)
+ + |..++.. ..+++.. ...|..++...++|.+++|+++......+. .++..+.+++.
T Consensus 268 ~~~~~~~~~~~~~-~~~~~~~-~~~~~~~g~~~~~G~~~~w~~~~~~~~~~~----------~~~~~~~~a~~------- 328 (482)
T 3h6e_A 268 ATPVDTATLPEAR-DCLVNVD-VHGRPVPSARFMGGREIETLIEIDTRRVDI----------KPDQPALLAAV------- 328 (482)
T ss_dssp SSCCCGGGCCGGG-TEEEEEC-TTSCEEEEEEECHHHHHHHHHCSGGGCTTC----------GGGHHHHHHTH-------
T ss_pred CccCCccccchhh-ceeeccc-cccccccchhhhhHHHHHHHHHhccccccc----------ccchhhHHHhc-------
Confidence 5 4 3333311 1111111 223566777788999999997543210000 01122222222
Q ss_pred CCccCCCCcEEEecCCCCCCCCCCCCCcceeeeCCCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHhCCCCccEEEE
Q 006707 443 PFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQG--IAYGTRHIVEHCNAHGHKIDTLLA 520 (634)
Q Consensus 443 p~~~~g~~gl~flP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~~~~~~rAvlEg--ia~~~r~~~~~l~~~g~~~~~I~~ 520 (634)
+|++++|++|+|||+|+|+|+||+ ||.|+|++. .| ++||++|+ ++|++|++++.|++. ++|++
T Consensus 329 --~~~g~~Gl~flP~l~Ger~P~~d~--rG~~~Gl~~----~~---l~RA~lE~~Gia~~~r~~l~~~~~~----~~i~~ 393 (482)
T 3h6e_A 329 --PEVLRHGRMILPTLMRGFGPYPHG--RFAWINRPE----DW---FERRAAACLYAALVADTALDLIGST----GRILV 393 (482)
T ss_dssp --HHHHHTTCEEESCSSTTCSSCTTC--CCEEESCCS----SH---HHHHHHHHHHHHHHHHHHHHHTTCC----SEEEE
T ss_pred --cccCCCCeEEecCCCCCCCCCCCC--ceEEeCCCH----HH---HHHHHHHHHhHHHHHHHHHHHhcCC----CeEEE
Confidence 225889999999999999999987 999999998 45 67899995 999999999998753 79999
Q ss_pred ecCCCCCHHHHHHHHHh-hCCceeccCCCChhhHHHHHHHHhh
Q 006707 521 CGGLAKNPLFLQQHADI-IGCPIILPRENESVLLGAAILGAVA 562 (634)
Q Consensus 521 ~GG~a~s~~~~Qi~Adv-lg~pV~~~~~~ea~alGAA~lA~~~ 562 (634)
+||++||++|+||+||| ||+||++++..|++|+|||++|+++
T Consensus 394 ~GG~a~s~~w~Qi~ADv~~g~pV~~~~~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 394 EGRFAEADVFVRALASLRPDCAVYTANAHNDVSFGALRLIDPG 436 (482)
T ss_dssp ESGGGGCHHHHHHHHHHSTTSEEEEESSCCCTTGGGHHHHCTT
T ss_pred eCCcccCHHHHHHHhhhcCCCeEEEcCCCchHHHHHHHHhCcc
Confidence 99999999999999999 9999999999999999999999998
No 19
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=100.00 E-value=2.3e-72 Score=625.57 Aligned_cols=464 Identities=16% Similarity=0.159 Sum_probs=371.3
Q ss_pred CCCcEEEEEecCCcccEEEEEcCCCcEEEEEEeeec----c-ccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEE
Q 006707 52 RSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQ----I-WKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKG 126 (634)
Q Consensus 52 m~~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~----~-~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~a 126 (634)
|.++++||||+|||++|++++|.+|+++...+.++. . .+++|++||||++||+++.++++++... ..+|.+
T Consensus 1 m~~~~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~----~~~i~~ 76 (489)
T 2uyt_A 1 MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAA----GIAIDS 76 (489)
T ss_dssp -CCEEEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHT----TCCCCE
T ss_pred CCcceEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhC----CCCceE
Confidence 566789999999999999999999998887766553 2 2478999999999999999999888652 458999
Q ss_pred EEecCC-ceeEEEcCCCCceeeccCCCCCcceeEecccchHHHHHHHhcCC--hhHHHHhCCCCCCCChHHHHHHHHHhc
Q 006707 127 VGFAAT-CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENL 203 (634)
Q Consensus 127 Igis~~-~~~V~~d~~G~pl~~~~~~~~~~~~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~wl~~~~ 203 (634)
|||++| |+.++||++|+|+ +++|.|+|.|+.++++++.+.. ++++++||+++++.++++||+|+++|+
T Consensus 77 Igis~q~~~~v~~D~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~ 147 (489)
T 2uyt_A 77 IGIDTWGVDFVLLDQQGQRV---------GLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQ 147 (489)
T ss_dssp EEEEECSSCEEEECTTSCEE---------SCCBCTTCGGGTTHHHHHHHHHCHHHHHHHHCCCCCTTSHHHHHHHHHHHC
T ss_pred EEEecCcccEEEECCCCCCc---------cCCccccCCccHHHHHHHHHhcCHHHHHHHhCCCCCCccHHHHHHHHHhcC
Confidence 999998 9999999999999 8899999999999999998754 579999999999999999999999999
Q ss_pred hhhHHhhceeecchhHHHhhhhCCCccccccccccccccccchhhhccccccCCCcCCCCCHHHHHHcCCCCcccccccc
Q 006707 204 QESWSMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 283 (634)
Q Consensus 204 Pe~~~~~~~~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~as~t~l~~~~~~~D~~~~~Ws~~~L~~~gi~~~l~~~lp~ 283 (634)
||+|+++.++++++|||.|+|||+.. +|.| +||+|++ ||+++++||+++|+.+||+.. +||
T Consensus 148 P~~~~~~~~~l~~~dyl~~~LTG~~~-~d~s--------~As~t~l------~d~~~~~W~~~ll~~~gi~~~---~lP- 208 (489)
T 2uyt_A 148 PELIPHIAHALLMPDYFSYRLTGKMN-WEYT--------NATTTQL------VNINSDDWDESLLAWSGANKA---WFG- 208 (489)
T ss_dssp GGGGGGCCEEEEHHHHHHHHHHSCCC-CBHH--------HHGGGTC------EETTTTEECHHHHHHHTCCGG---GSC-
T ss_pred chHHHHhhhccCcHHHHHHHHhCCcc-ceeh--------hhhhhcc------cccCcCccCHHHHHHcCCCHH---HCC-
Confidence 99999999999999999999999975 4555 4566664 589999999999999999974 357
Q ss_pred cCcccccCCCcccCCCCHHHHHHcCCCCCCcEEE-ccchhhhhhhccccccCcccchhchhhhhhccceEEEEeccccee
Q 006707 284 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGT-SLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCH 362 (634)
Q Consensus 284 l~~~~~~~g~~iG~~i~~~~a~~~GL~~g~pV~~-g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~~~ 362 (634)
+++++++++|+ ++.+ +| +|+||++ |+||++|+++|+ +... ++++++++|||.++
T Consensus 209 ---~i~~~~~~~G~-~~~~----~~--~g~pV~~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~~~ 263 (489)
T 2uyt_A 209 ---RPTHPGNVIGH-WICP----QG--NEIPVVAVASHDTASAVIAS-PLNG--------------SRAAYLSSGTWSLM 263 (489)
T ss_dssp ---CCBCTTCEEEE-EECT----TC--CEEEEECCCCBHHHHHHHHS-CCCS--------------TTEEEEEESSSEEE
T ss_pred ---CccCCCcceee-eecc----cC--CCCcEEEECchHHHHHHhcC-CCCC--------------CCcEEEEEchHhhc
Confidence 68889999997 7632 23 7899998 889999999998 5443 47899999999999
Q ss_pred eeeeCcccccC-cccc-cccccccCCeeEecccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhhc
Q 006707 363 MAVSRNKLFIP-GVWG-PFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHER 440 (634)
Q Consensus 363 ~~~~~~p~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~ 440 (634)
...+++|..++ .... .++++..++.|..++++. + .|+++.+... .+.+.|+++.+.++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g----~W~~~~~~~~---------~~~~~~~~l~~~a~------ 323 (489)
T 2uyt_A 264 GFESQTPFTNDTALAANITNEGGAEGRYRVLKNIM-G----LWLLQRVLQE---------RQINDLPALIAATQ------ 323 (489)
T ss_dssp EEEESSCCCSHHHHHHTCEEECCGGGCEEEEEEEC-T----THHHHHHHHH---------TTCCCHHHHHHHHT------
T ss_pred ccccCCCccCHHHHhhcceeecCCCCeEEEehhHh-H----HHHHHHhhcc---------cchhhHHHHHHHhc------
Confidence 88888776543 2211 233345678898887765 2 5988876421 01234555554332
Q ss_pred CCCCccCCCCcEEEecCCCCCCCCCCCCC-----cceeeeCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CC
Q 006707 441 NSPFVAALTEDIHVLPDFHGNRSPIADPK-----SKGIICGM--TLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HG 512 (634)
Q Consensus 441 ~~p~~~~g~~gl~flP~l~Ger~P~~d~~-----arg~~~Gl--~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~-~g 512 (634)
.+++++++ |+| ++.|+++++ .+|.|.|+ +..|++.| ++||++||++|++|++++.|++ .|
T Consensus 324 ----~~~~~~~l-~~p----~~~~~~~p~~~~~~~~g~~~g~~~~~~~t~~~---l~RAvlEgia~~~r~~~~~l~~~~g 391 (489)
T 2uyt_A 324 ----ALPACRFI-INP----NDDRFINPDEMCSEIQAACREMAQPIPESDAE---LARCIFDSLALLYADVLHELAQLRG 391 (489)
T ss_dssp ----TSCSSSSC-CCT----TSGGGSSCSCHHHHHHHHHHHTTCCCCCSHHH---HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----cCCCcCee-ECC----CCCccCChhhhHHHHHHHHHhcCCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 23576654 778 467788887 58889888 47888888 5679999999999999999987 57
Q ss_pred CCccEEEEecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCCCCCH---HHHHHHhhhcCcEEeechhh
Q 006707 513 HKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSL---IEAMKAMNAAGQVCMTVGFY 589 (634)
Q Consensus 513 ~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~~~~~---~e~~~~~~~~~~~~~P~~~~ 589 (634)
.++++|+++||++||++|+||+||+||+||+++. .|++++|||++|+.+.+...++ +++++.+.. .++|+|.+..
T Consensus 392 ~~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~-~e~~alGaa~~A~~a~~~~~~~~~~~~~~~~~~~-~~~~~P~~~~ 469 (489)
T 2uyt_A 392 EDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP-VEASTLGNIGIQLMTLDELNNVDDFRQVVSTTAN-LTTFTPNPDS 469 (489)
T ss_dssp CCCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC-TTHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHSC-CEEECCCTTS
T ss_pred CCCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC-ccHhHHHHHHHHHHHcCccccHHHHHHHHHhhCC-CeEECCCcch
Confidence 8899999999999999999999999999999876 7999999988888877665544 445555544 5899999888
Q ss_pred H-HhhhHHhccccchhhhhhhh
Q 006707 590 L-LTYLYLVYITRDKEAKICQL 610 (634)
Q Consensus 590 ~-~~y~~~~~~~~~~~~~~~~~ 610 (634)
. +.|..++ +||+++|..
T Consensus 470 ~~~~Y~~~~----~~y~~~~~~ 487 (489)
T 2uyt_A 470 EIAHYVALI----HSTRQTKEL 487 (489)
T ss_dssp HHHHHHHHT----TC-------
T ss_pred HHHHHHHHH----HHhhchhhh
Confidence 8 8888843 567777653
No 20
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.61 E-value=4e-15 Score=152.07 Aligned_cols=131 Identities=14% Similarity=0.102 Sum_probs=97.7
Q ss_pred cccccchhhHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhhcCCCCccCCCCcEEEecCCCCCCCCCCCCCc
Q 006707 391 EGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKS 470 (634)
Q Consensus 391 ~~~~~~~G~~l~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~a 470 (634)
..|...+|..++|+.+.+.. + ++++++++.+. . .|+..|+|++. .+
T Consensus 125 ~~ca~GtG~~le~~a~~lg~-------------~-~~el~~la~~~-------------~----~p~~~~~~c~v---fa 170 (270)
T 1hux_A 125 DKCAAGTGRFLDVMANILEV-------------K-VSDLAELGAKS-------------T----KRVAISSTCTV---FA 170 (270)
T ss_dssp SSCCTTSHHHHHHHHHHHTC-------------C-TTTHHHHHTTC-------------C----SCCCCCCCSHH---HH
T ss_pred cccchhhHHHHHHHHHHhCC-------------C-HHHHHHHHhhC-------------C----CCCCcccccch---hH
Confidence 34555667899999887632 2 45677766431 0 46666777663 36
Q ss_pred ceeeeCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceeccCCCC
Q 006707 471 KGIICGMT-LDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENE 549 (634)
Q Consensus 471 rg~~~Gl~-~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e 549 (634)
++.++++. ..++++| ++||++|++++.+... ++..+. .++|+++||.++|+.|+|+++|++|+||.+++..+
T Consensus 171 ~s~v~~l~~~g~~~~d---i~~av~e~Va~~i~~~---~~~~~~-~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~ 243 (270)
T 1hux_A 171 ESEVISQLSKGTDKID---IIAGIHRSVASRVIGL---ANRVGI-VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQ 243 (270)
T ss_dssp HHHHHHHHHTTCCHHH---HHHHHHHHHHHHHHHH---HHTTCC-CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGG
T ss_pred hHHHHHHhhCCCCHHH---HHHHHHHHHHHHHHHH---HhcCCC-CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcc
Confidence 67677766 6677778 5569999999998443 444333 47899999999999999999999999999988777
Q ss_pred -hhhHHHHHHHHhh
Q 006707 550 -SVLLGAAILGAVA 562 (634)
Q Consensus 550 -a~alGAA~lA~~~ 562 (634)
++|+|||++|+..
T Consensus 244 ~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 244 YNGALGAALYAYKK 257 (270)
T ss_dssp GHHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHh
Confidence 6999999999764
No 21
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.65 E-value=4.5e-06 Score=84.45 Aligned_cols=73 Identities=15% Similarity=0.266 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceeccC-CCChhhHHHHHHH
Q 006707 483 EKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAILG 559 (634)
Q Consensus 483 ~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~-~~ea~alGAA~lA 559 (634)
+.++..+++.+++.+...++..++ ..+ .++.|+++||+++++.+.+++++.|+.||.++. ..+++|+|||+.|
T Consensus 199 ~~~~~~~~~~~~~~i~~~i~~~l~---~~~-~~~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 199 HREIMRVVRPVIEKMALIVKEVIK---NYD-QTLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT---TSC-SSCCEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---hcC-CCCEEEEECCccchhhHHHHHHHHhCCCccccCChHHHHHHHHHhcC
Confidence 445555667788877766655544 222 367999999999999999999999999998765 4568999999753
No 22
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.25 E-value=2.4e-06 Score=88.89 Aligned_cols=84 Identities=21% Similarity=0.365 Sum_probs=67.5
Q ss_pred CCCCcEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEec
Q 006707 51 ARSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (634)
Q Consensus 51 ~m~~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis 130 (634)
.|+ +|+||||+|+|++|++++|.+|+++...+.+++. +++++++++.+.+.+++++++.+.+..+|.+|||+
T Consensus 3 ~m~-~~~lgiDiggt~~~~~l~d~~g~il~~~~~~~~~-------~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~igi~ 74 (326)
T 2qm1_A 3 AMD-KKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNI-------LEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMG 74 (326)
T ss_dssp GGG-CEEEEEEECSSEEEEEEEETTCCEEEEEEEECCC-------TTTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred Ccc-cEEEEEEECCCEEEEEEECCCCCEEEEEEEcCCC-------CCCHHHHHHHHHHHHHHHHHHcCCCccceeEEEEe
Confidence 443 6999999999999999999999999988777652 35788899999999999998877666789999987
Q ss_pred CCceeEEEcCC-CCce
Q 006707 131 ATCSLVAVDAD-GSPV 145 (634)
Q Consensus 131 ~~~~~V~~d~~-G~pl 145 (634)
... ++|.+ |..+
T Consensus 75 ~pG---~vd~~~g~v~ 87 (326)
T 2qm1_A 75 TPG---SVDIEKGTVV 87 (326)
T ss_dssp ESS---EEETTTTEEE
T ss_pred ccc---ceeCCCCEEE
Confidence 643 45654 5444
No 23
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.13 E-value=4.8e-06 Score=87.39 Aligned_cols=77 Identities=21% Similarity=0.241 Sum_probs=60.9
Q ss_pred CCCCcEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCC-CeEEEEe
Q 006707 51 ARSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGE-EVKGVGF 129 (634)
Q Consensus 51 ~m~~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~-~I~aIgi 129 (634)
+|++.|+||||+|+|++|++++|.+|+++.+.+.+.. .+.+++++++++.+.+.+++++++.+.+.. +|.+|||
T Consensus 2 ~~M~~~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~-----~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi 76 (347)
T 2ch5_A 2 QFMAAIYGGVEGGGTRSEVLLVSEDGKILAEADGLST-----NHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGL 76 (347)
T ss_dssp CSSSCEEEEEEECTTCEEEEEEETTSCEEEEEEECCC-----CHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEE
T ss_pred cccceEEEEEEcCccceEEEEEeCCCCEEEEEeCCCC-----CcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEEE
Confidence 3434599999999999999999999999987765321 123468999999999999999988776555 7888887
Q ss_pred cCC
Q 006707 130 AAT 132 (634)
Q Consensus 130 s~~ 132 (634)
+..
T Consensus 77 ~~p 79 (347)
T 2ch5_A 77 SLS 79 (347)
T ss_dssp EET
T ss_pred ecc
Confidence 543
No 24
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=98.08 E-value=1.1e-05 Score=83.37 Aligned_cols=74 Identities=20% Similarity=0.356 Sum_probs=57.0
Q ss_pred CCCC--cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCe--EE
Q 006707 51 ARSR--SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEV--KG 126 (634)
Q Consensus 51 ~m~~--~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I--~a 126 (634)
.|++ +|+||||+|+|++|++++|.+|+++.+.+.+.. . ..++++++++.+.+.+++++++.+.+..+| .+
T Consensus 5 ~m~~~~~~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~~-----~-~~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~ 78 (305)
T 1zc6_A 5 TMNPSIRYLIGVDGGGTGTRIRLHASDGTPLAMAEGGAS-----A-LSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACA 78 (305)
T ss_dssp ---CCCCEEEEEEECSSCEEEEEEETTCCEEEEEEESCC-----C-GGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEE
T ss_pred hhcccCCEEEEEEcCccceEEEEEcCCCCEEEEEeCCCC-----C-cccCHHHHHHHHHHHHHHHHHhcCCChhhhccce
Confidence 4543 599999999999999999999999987655321 1 236899999999999999998877666676 56
Q ss_pred EEec
Q 006707 127 VGFA 130 (634)
Q Consensus 127 Igis 130 (634)
|+|+
T Consensus 79 igig 82 (305)
T 1zc6_A 79 IGLG 82 (305)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6653
No 25
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.96 E-value=2.8e-05 Score=84.20 Aligned_cols=91 Identities=14% Similarity=0.184 Sum_probs=72.0
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCce
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~~~ 134 (634)
.|+||||+|+|++|++++|.+|+++...+.+++ .++++++++.+.+.+++++++.+.+..+|.+|||+...
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG- 178 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHELGGEVLIDTKIDIH--------EIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPG- 178 (429)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEEECC--------CCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESS-
T ss_pred CEEEEEEECCCEEEEEEECCCCCEEEEEEEcCC--------CCCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEeccC-
Confidence 589999999999999999999999998777664 24799999999999999998877767789999987543
Q ss_pred eEEEcCC-CCceeeccCCCCCcceeEecccc
Q 006707 135 LVAVDAD-GSPVSVSWNGDSRRNIIVWMDHR 164 (634)
Q Consensus 135 ~V~~d~~-G~pl~~~~~~~~~~~~i~W~D~R 164 (634)
++|.+ |..+. .+.+.|.|-.
T Consensus 179 --~vd~~~g~v~~--------~~~l~w~~~~ 199 (429)
T 1z05_A 179 --LVNSEQGIVLQ--------MPHYNVKNLA 199 (429)
T ss_dssp --EEETTTTEEEE--------CSSSBCSSBC
T ss_pred --cEeCCCCeEee--------cCCCCCCCCC
Confidence 45654 55442 3444587653
No 26
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=97.95 E-value=1.8e-05 Score=82.38 Aligned_cols=88 Identities=30% Similarity=0.450 Sum_probs=67.1
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCce
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~~~ 134 (634)
+|+||||+|+|++|++++|.+|+++.+.+.++ +++++++++.+.+.+++++++ .+|.+|||+...
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~-----~~i~gigi~~pG- 66 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGRILSTFKVAT---------PPTAEGIVDAICAAVAGASEG-----HDVEAVGIGAAG- 66 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCBCCCEEEEC---------CSSHHHHHHHHHHHHHHHHTT-----CCEEEEEEEESS-
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEeeC---------CCCHHHHHHHHHHHHHHHHhh-----cCceEEEEeccc-
Confidence 58999999999999999999999998776665 257999999999999888653 478999987543
Q ss_pred eEEEcCC-CCceeeccCCCCCcceeEecccchHH
Q 006707 135 LVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVK 167 (634)
Q Consensus 135 ~V~~d~~-G~pl~~~~~~~~~~~~i~W~D~Ra~~ 167 (634)
++|.+ |.... .+.+.|.+..-.+
T Consensus 67 --~vd~~~g~v~~--------~~~l~w~~~~l~~ 90 (321)
T 3vgl_A 67 --YVDDKRATVLF--------APNIDWRHEPLKD 90 (321)
T ss_dssp --EECTTSSCEEE--------CSSSCCEEECHHH
T ss_pred --cEeCCCCEEEe--------CCCCCCcCCCHHH
Confidence 56765 54442 3455787655333
No 27
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=97.92 E-value=1.8e-05 Score=84.99 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=65.8
Q ss_pred CcEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCc
Q 006707 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATC 133 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~~ 133 (634)
..|+||||+|+|++|++++|.+|+++...+.+++ +++++++++.+.+.+++++++.+.+..+|.+|||+...
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG 155 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDLSSKLVVEESQELA--------LKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPG 155 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEETTCCEEEEEEEECC--------SSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESS
T ss_pred ccEEEEEEEcCCEEEEEEEcCCCCEEEEEEecCC--------CCCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEEEeec
Confidence 3589999999999999999999999988777663 45788899999999999998876666789999997653
Q ss_pred eeEEEcCC-CCce
Q 006707 134 SLVAVDAD-GSPV 145 (634)
Q Consensus 134 ~~V~~d~~-G~pl 145 (634)
++|.+ |..+
T Consensus 156 ---~vd~~~g~v~ 165 (406)
T 1z6r_A 156 ---IIDTENGIVH 165 (406)
T ss_dssp ---EEETTTTEEE
T ss_pred ---CEeCCCCEEe
Confidence 45654 5444
No 28
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.91 E-value=1.8e-05 Score=84.24 Aligned_cols=81 Identities=20% Similarity=0.338 Sum_probs=65.1
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCce
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~~~ 134 (634)
.|+||||+|+|++|++++|.+|+++...+.+++ .+++++++++.+.+.+++++++.+.+..+|.+|||+...
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~~-------~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG- 158 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDASMNILAHEAHPLP-------SQSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPG- 158 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECC-------SSCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEESS-
T ss_pred CeEEEEEECCCEEEEEEECCCCCEEEEEEEccC-------CCCCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEEeec-
Confidence 589999999999999999999999988877765 245899999999999999988765556778888887543
Q ss_pred eEEEcC-CCCce
Q 006707 135 LVAVDA-DGSPV 145 (634)
Q Consensus 135 ~V~~d~-~G~pl 145 (634)
++|. +|..+
T Consensus 159 --~vd~~~g~v~ 168 (380)
T 2hoe_A 159 --PIDTERGIII 168 (380)
T ss_dssp --CEETTTTEEC
T ss_pred --cEECCCCEEe
Confidence 3455 35544
No 29
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=97.89 E-value=4e-05 Score=80.35 Aligned_cols=79 Identities=18% Similarity=0.183 Sum_probs=61.7
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCce
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~~~ 134 (634)
.|+||||+|+|++|++++|.+|+++...+.+++ ++++++++.+.+.+++++++.+....+|.+|||+...
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~---------~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~pG- 99 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNP---------KTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGG- 99 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEEEEEECC---------SSHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEESS-
T ss_pred cEEEEEEECCCEEEEEEECCCCcEEEEEEEcCC---------CCHHHHHHHHHHHHHHHHHhcccccCceEEEEEeccc-
Confidence 589999999999999999999999987766543 4688899999999998887654445679899987643
Q ss_pred eEEEcCC-CCce
Q 006707 135 LVAVDAD-GSPV 145 (634)
Q Consensus 135 ~V~~d~~-G~pl 145 (634)
++|.+ |..+
T Consensus 100 --~vd~~~g~v~ 109 (343)
T 2yhw_A 100 --RVNPREGIVL 109 (343)
T ss_dssp --EEETTTTEEE
T ss_pred --CEeCCCCEEE
Confidence 45553 5443
No 30
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=97.72 E-value=4.8e-05 Score=79.06 Aligned_cols=78 Identities=19% Similarity=0.218 Sum_probs=60.7
Q ss_pred CcEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCc
Q 006707 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATC 133 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~~ 133 (634)
..|+||||+|.|++|++++|.+|+++...+.+++ ...+++++++.+.+.++++++. ..+|.+|||+...
T Consensus 18 ~~~~lgidiggt~i~~~l~d~~g~il~~~~~~~~-------~~~~~~~~~~~i~~~i~~~~~~----~~~i~gigi~~pG 86 (321)
T 3r8e_A 18 QGMILGIDVGGTSVKFGLVTPEGEIQNATRFMTA-------DWVNGIGFVESMKLEIGNFLKQ----YPIVKGVGIGWPG 86 (321)
T ss_dssp -CCEEEEECCSSEEEEEEECTTCCEEEEEEEEHH-------HHHTTTCHHHHHHHHHHHHHHH----CTTCCEEEEEESS
T ss_pred CcEEEEEEECCCEEEEEEEcCCCcEEEEEEEeCC-------CCCCHHHHHHHHHHHHHHHHhc----cCCeeEEEEEecc
Confidence 3589999999999999999999999998887765 2346778888888888888762 4678888887643
Q ss_pred eeEEEcC-CCCce
Q 006707 134 SLVAVDA-DGSPV 145 (634)
Q Consensus 134 ~~V~~d~-~G~pl 145 (634)
++|. +|..+
T Consensus 87 ---~vd~~~g~v~ 96 (321)
T 3r8e_A 87 ---LVSLDRTKVI 96 (321)
T ss_dssp ---EECTTSCCEE
T ss_pred ---cEECCCCEEE
Confidence 4574 46655
No 31
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=97.71 E-value=0.0001 Score=76.77 Aligned_cols=75 Identities=19% Similarity=0.241 Sum_probs=59.3
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcee
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSL 135 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~~~~ 135 (634)
|+||||+|+|++|++++|.+|+++.+.+.+++ ..+++++++.+.+.++++.++.+ .+.+|||+...
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~~~----~~~gigi~~pG-- 90 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLERVATERVPTP--------TDDYPLLLETIAGLVAKYDQEFA----CEGKIGLGLPG-- 90 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECC--------TTCHHHHHHHHHHHHHHHHHHHT----SCCEEEEEESE--
T ss_pred EEEEEEECCCEEEEEEEeCCCcEEEEEEecCC--------CCCHHHHHHHHHHHHHHHHHhcC----CccEEEEEeec--
Confidence 68999999999999999999999998877765 24789999999999998887643 36677776442
Q ss_pred EEEcC-CCCce
Q 006707 136 VAVDA-DGSPV 145 (634)
Q Consensus 136 V~~d~-~G~pl 145 (634)
++|. +|...
T Consensus 91 -~vd~~~g~v~ 100 (327)
T 4db3_A 91 -MEDADDATVL 100 (327)
T ss_dssp -EECTTTCCEE
T ss_pred -cEeCCCCEEE
Confidence 5674 46654
No 32
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=97.57 E-value=5.3e-05 Score=78.39 Aligned_cols=87 Identities=20% Similarity=0.208 Sum_probs=62.4
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCce
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~~~ 134 (634)
.|+||||+|.|++|++++|.+|+++.+.+.+.+ +.+++.+++.+.+.+++++++.+ .+|.+|||+...
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~~~---~~i~gigi~~pG- 74 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAEGETLHCEKKRTA--------EVIAPGLVSGIGEMIDEQLRRFN---ARCHGLVMGFPA- 74 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEEEEEEHH--------HHHTTCHHHHHHHHHHHHHHHHT---EEEEEEEEEESS-
T ss_pred CEEEEEEeCCCEEEEEEECCCCCEEEEEEecCc--------cccHHHHHHHHHHHHHHHHHhcC---CCeeEEEEeccc-
Confidence 489999999999999999999999998776654 22345677888888888776543 368888887542
Q ss_pred eEEEcCC-CCceeeccCCCCCcceeEeccc
Q 006707 135 LVAVDAD-GSPVSVSWNGDSRRNIIVWMDH 163 (634)
Q Consensus 135 ~V~~d~~-G~pl~~~~~~~~~~~~i~W~D~ 163 (634)
++|.+ |..+. .+.+.|.+.
T Consensus 75 --~vd~~~g~v~~--------~~~l~~~~~ 94 (310)
T 3htv_A 75 --LVSKDKRTIIS--------TPNLPLTAA 94 (310)
T ss_dssp --CBCTTSSCBCS--------CCSSSCCHH
T ss_pred --cEeCCCCEEEe--------CCCCCCccc
Confidence 35654 55442 344567653
No 33
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.51 E-value=0.0002 Score=73.29 Aligned_cols=56 Identities=27% Similarity=0.319 Sum_probs=47.6
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHH
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSL 116 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~ 116 (634)
|+||||+|+|++|++++|.+|+++...+.+++ .+.+++++++++.+.+.+++++++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~-----~~~~~~~~~~~~~i~~~i~~~~~~ 58 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPG-----NYHNVGLTRAIENIKEAVKIAAKG 58 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEEESCC-----CHHHHCHHHHHHHHHHHHHHHHTS
T ss_pred EEEEEEeCCCcEEEEEEcCCCCEEEEEeCCCC-----CcccCCHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999988766653 223578999999999999888764
No 34
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.30 E-value=0.0052 Score=62.49 Aligned_cols=75 Identities=17% Similarity=0.208 Sum_probs=57.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCCccEEEEecC-CCCCHHHHHHHHHh---hCCceeccCCCC-hhhH
Q 006707 480 DSSEKQLALLYLATVQGIAYGTRHIVEH-CNAHGHKIDTLLACGG-LAKNPLFLQQHADI---IGCPIILPRENE-SVLL 553 (634)
Q Consensus 480 ~~~~~~~~~~~rAvlEgia~~~r~~~~~-l~~~g~~~~~I~~~GG-~a~s~~~~Qi~Adv---lg~pV~~~~~~e-a~al 553 (634)
..++++++ ++++.+++..+-.+... .+. .++++|+++|| .+.|+.+++.+++. .+.++.+++.++ .+|+
T Consensus 206 g~~~eDIa---asl~~sV~~~I~~la~~~a~~--~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAl 280 (287)
T 2ews_A 206 DFTPSNKL---AAVIGVVGEVVTTMAITVARE--FKTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAI 280 (287)
T ss_dssp CCCHHHHH---HHHHHHHHHHHHHHHHHHHHH--TTCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHH
T ss_pred CCCHHHHH---HHHHHHHHHHHHHHHHHHHHh--CCCCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHH
Confidence 44678865 59999998777655443 223 34458999999 89999999999998 588898887555 7999
Q ss_pred HHHHHH
Q 006707 554 GAAILG 559 (634)
Q Consensus 554 GAA~lA 559 (634)
|||+.|
T Consensus 281 GAaL~~ 286 (287)
T 2ews_A 281 GALYLE 286 (287)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999864
No 35
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.30 E-value=0.00062 Score=68.82 Aligned_cols=70 Identities=21% Similarity=0.270 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceeccC-CCChhhHHHHHHHHhh
Q 006707 489 LYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAILGAVA 562 (634)
Q Consensus 489 ~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~-~~ea~alGAA~lA~~~ 562 (634)
+.+++++.++-.+....... ...++|+++||.++|+.+++.+++.||+++.++. ..+.+|+|||++|..-
T Consensus 185 i~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 185 IVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHH
Confidence 34588887766554433221 3457899999999999999999999999999987 4568899999998643
No 36
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.26 E-value=0.0023 Score=66.93 Aligned_cols=75 Identities=20% Similarity=0.177 Sum_probs=57.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCccEEEEecC-CCCCHHHHHHHHHhhC------CceeccCCCC-h
Q 006707 480 DSSEKQLALLYLATVQGIAYGTRHIVEHC-NAHGHKIDTLLACGG-LAKNPLFLQQHADIIG------CPIILPRENE-S 550 (634)
Q Consensus 480 ~~~~~~~~~~~rAvlEgia~~~r~~~~~l-~~~g~~~~~I~~~GG-~a~s~~~~Qi~Advlg------~pV~~~~~~e-a 550 (634)
..++++++ ++++.+++..+..+.-.. +..+. ++|+++|| .++|+..+++++..++ +++..++.++ +
T Consensus 275 ~~~~eDIa---~gll~sVa~~I~~lA~l~A~~~~i--~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~ 349 (360)
T 2i7n_A 275 SISKEDLA---RATLVTITNNIGSIARMCALNENI--DRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYF 349 (360)
T ss_dssp TCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHTC--CCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCH
T ss_pred CCCHHHHH---HHHHHHHHHHHHHHHHHHHHHcCC--CeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHH
Confidence 34577855 599999999987765322 22343 47999999 8999999999999985 6888776444 8
Q ss_pred hhHHHHHHH
Q 006707 551 VLLGAAILG 559 (634)
Q Consensus 551 ~alGAA~lA 559 (634)
+|+|||+.+
T Consensus 350 GAlGAaL~~ 358 (360)
T 2i7n_A 350 GAVGALLEL 358 (360)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999975
No 37
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.18 E-value=0.00093 Score=68.45 Aligned_cols=71 Identities=17% Similarity=0.266 Sum_probs=51.1
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcee
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSL 135 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~~~~ 135 (634)
|+||||+|.|++|++++|.+|+++.+.+.+++ ..+++.+++.+.+. +++ ..+|.+|||+...
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~i~~~----~~~----~~~i~gigi~~pG-- 66 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGEIILTKSAEIS--------GSDGDQILAEMKVF----LAE----NTDVTGIAVSAPG-- 66 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECS--------TTCHHHHHHHHHHH----HHT----CTTCCEEEEEESS--
T ss_pred EEEEEEeCCCeEEEEEECCCCCEEEEEEecCC--------CCCHHHHHHHHHHH----Hhh----cCCeeEEEEecCc--
Confidence 68999999999999999999999998877754 23556666555443 332 3568888887543
Q ss_pred EEEcCC-CCce
Q 006707 136 VAVDAD-GSPV 145 (634)
Q Consensus 136 V~~d~~-G~pl 145 (634)
++|.+ |..+
T Consensus 67 -~vd~~~g~v~ 76 (297)
T 4htl_A 67 -YVNPKTGLIT 76 (297)
T ss_dssp -EECTTTCEEE
T ss_pred -ceeCCCCEEE
Confidence 56754 6554
No 38
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.13 E-value=0.00074 Score=68.23 Aligned_cols=64 Identities=13% Similarity=0.238 Sum_probs=47.9
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
|+||||+|||++|++++|+++++++....+. |... + ...+++++++++.+....++.+++.++.
T Consensus 2 ~~lGID~GsT~tk~av~d~~~~il~~~~~~~------g~~~---e----~a~~vl~~~~~~a~~~~~~~~~~a~t~~ 65 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKNGEDIVASETISS------GTGT---T----GPSRVLEKLYGKTGLAREDIKKVVVTGY 65 (276)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEESC------CTTS---S----HHHHHHHHHHHHHCCCGGGEEEEEEEST
T ss_pred eEEEEEcCccEEEEEEEECCCeEEEEEEecC------CCCH---H----HHHHHHHHHHHHCCCcchhccccccCch
Confidence 7999999999999999999999987654432 2111 1 1234677777777877888998888764
No 39
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=97.09 E-value=0.00067 Score=69.81 Aligned_cols=59 Identities=12% Similarity=0.229 Sum_probs=43.7
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
++++|||+|.|++|++++|.+|+++...+.+++ +++++++.+.+.+ ++ .+|.+|||+..
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~t~----------~~~~~l~~i~~~~----~~-----~~i~gigi~~p 61 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDGTIIDRIEFPTX----------MPDETIEXVIQYF----SQ-----FSLQAIGIGSF 61 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEEEEEECC----------CHHHHHHHHHHHH----TT-----SCCSEEEEEEC
T ss_pred cEEEEEEECcceeEEEEEECCCcEEEEEEecCC----------ChHHHHHHHHHHh----cc-----CCceEEEEEec
Confidence 579999999999999999999999987766542 4666665554433 22 36778888653
No 40
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=97.08 E-value=0.001 Score=67.03 Aligned_cols=55 Identities=24% Similarity=0.448 Sum_probs=42.0
Q ss_pred cEEEEEecCCcccEEEEEcCC-CcEEEE-EEeeeccccCCCccccCHHHHHHHHHHHHHHHHHH
Q 006707 55 SVFLGVDVGTGSARAGLFDES-GKLLGS-ASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSL 116 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~-g~vl~~-~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~ 116 (634)
.|+||||+|.|++|++++|.+ |+++.. .+.+++ ...+++.+++.+.+.+++++++
T Consensus 12 ~~~lgidiggt~i~~~l~dl~~g~i~~~~~~~~~~-------~~~~~~~~~~~i~~~i~~~~~~ 68 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTP-------QPATPESVAEAVALVVAELSAR 68 (267)
T ss_dssp CCEEEEEECSSEEEEEEEETTTTEEEEEEEEEECC-------SSCCHHHHHHHHHHHHHHHHTS
T ss_pred CEEEEEEECCCEEEEEEEECCCCeEEEEEEecCCC-------ccCCHHHHHHHHHHHHHHHHHh
Confidence 478999999999999999976 777743 233332 1346888999999999888764
No 41
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=97.07 E-value=0.00075 Score=76.25 Aligned_cols=86 Identities=20% Similarity=0.256 Sum_probs=68.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceeccC-CCChhhHHHHHHHH
Q 006707 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAILGA 560 (634)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~-~~ea~alGAA~lA~ 560 (634)
++.++..+++.+++.+.-.++..++...-....++.|+++||+++.|.+.+++.+.||.++.... ..++.|+|||+.|+
T Consensus 301 tr~~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~ 380 (605)
T 4b9q_A 301 TRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp EHHHHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHH
Confidence 46677777778888888777777665332223578999999999999999999999999987644 66799999999999
Q ss_pred hhcCCCC
Q 006707 561 VAAKRYS 567 (634)
Q Consensus 561 ~~~g~~~ 567 (634)
.-.|..+
T Consensus 381 ~l~~~~~ 387 (605)
T 4b9q_A 381 VLTGDVK 387 (605)
T ss_dssp HHHTSSC
T ss_pred HhcCCCC
Confidence 8766543
No 42
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=97.06 E-value=0.0011 Score=70.50 Aligned_cols=80 Identities=18% Similarity=0.251 Sum_probs=63.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhh-CCceecc-CCCChhhHHHHHHH
Q 006707 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILP-RENESVLLGAAILG 559 (634)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl-g~pV~~~-~~~ea~alGAA~lA 559 (634)
++.++..+++.+++.+.-.++..++........++.|+++||+++.+.+.+++.+.| +.+|... +..++.|+|||+.|
T Consensus 311 ~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 390 (394)
T 3qfu_A 311 TRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQA 390 (394)
T ss_dssp EHHHHHHHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHH
Confidence 456666677788888777777766654322235789999999999999999999999 8998775 46679999999998
Q ss_pred Hh
Q 006707 560 AV 561 (634)
Q Consensus 560 ~~ 561 (634)
+.
T Consensus 391 ~~ 392 (394)
T 3qfu_A 391 GV 392 (394)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 43
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.05 E-value=0.00054 Score=70.46 Aligned_cols=65 Identities=25% Similarity=0.419 Sum_probs=49.4
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
|+||||+|+|++|++++|.++ ++...+.+++ ..+++.+++.+.+.+++++++. ..+|.+|||+..
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~-~l~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi~~p 66 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKR-LLSKVVVPTP--------KEGGERVAEALAEAAERAEREA---GVRGEAIGLGTP 66 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSS-BSCCEEEECC--------SSCHHHHHHHHHHHHHHHHHHH---TCCCSSEEEEES
T ss_pred EEEEEEEcCCEEEEEEEeCCC-cEEEEEEcCC--------CCChHHHHHHHHHHHHHHHhhc---cCCceEEEEEec
Confidence 789999999999999999884 5555555554 3345889999999998888764 356777777643
No 44
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.99 E-value=0.0012 Score=70.50 Aligned_cols=83 Identities=17% Similarity=0.250 Sum_probs=63.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhh-CCceecc-CCCChhhHHHHHHH
Q 006707 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILP-RENESVLLGAAILG 559 (634)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl-g~pV~~~-~~~ea~alGAA~lA 559 (634)
++.++..+++.+++.+.-.++..++........++.|+++||+++.+.+.+++.+.| +.+|... +..++.|+|||+.|
T Consensus 319 ~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 398 (404)
T 3i33_A 319 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 398 (404)
T ss_dssp EHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHH
Confidence 356666666677777777776666654322235789999999999999999999999 8888775 46678999999999
Q ss_pred HhhcC
Q 006707 560 AVAAK 564 (634)
Q Consensus 560 ~~~~g 564 (634)
+.-.|
T Consensus 399 ~~l~~ 403 (404)
T 3i33_A 399 AILIG 403 (404)
T ss_dssp HHHC-
T ss_pred HHhcC
Confidence 86543
No 45
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=96.99 E-value=0.0011 Score=70.98 Aligned_cols=82 Identities=13% Similarity=0.172 Sum_probs=61.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceec---------cCCCChhh
Q 006707 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIIL---------PRENESVL 552 (634)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~---------~~~~ea~a 552 (634)
++.++..+++.+++.+.-.++..++..+.....++.|+++||+++.+.+.+++.+.|+.++.+ .+..++.|
T Consensus 312 tr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava 391 (409)
T 4gni_A 312 NRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQA 391 (409)
T ss_dssp EHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHH
Confidence 456666666777777776666665543222235789999999999999999999999987432 35677999
Q ss_pred HHHHHHHHhhc
Q 006707 553 LGAAILGAVAA 563 (634)
Q Consensus 553 lGAA~lA~~~~ 563 (634)
+|||+.|+.--
T Consensus 392 ~GAa~~~~~~~ 402 (409)
T 4gni_A 392 RGAALQASLIQ 402 (409)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhhhhh
Confidence 99999988643
No 46
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=96.69 E-value=0.004 Score=67.55 Aligned_cols=75 Identities=16% Similarity=0.235 Sum_probs=52.6
Q ss_pred CCcEEEEEecCCcccEEEEEcCCCcE---EEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCC--eEEE
Q 006707 53 SRSVFLGVDVGTGSARAGLFDESGKL---LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEE--VKGV 127 (634)
Q Consensus 53 ~~~~~LGIDiGTtsiKavl~d~~g~v---l~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~--I~aI 127 (634)
.+..|||||+|.|++|++++|.+|++ +...+.+.|.. ...-+++++++.+.+++++.+++.+....+ +.+|
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~----~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~lGi 134 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAM----STTAIPSDLWGNXAXSNAAFSSXEFSSXAGSVPLGF 134 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTT----TSCSCTHHHHHHHHHHHHHHHHHHTSSCSSCEEEEE
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCc----cCCCCHHHHHHHHHHHHHHHHhhcccccccccceee
Confidence 44578999999999999999999987 44444444311 112367999999999999998865432222 4566
Q ss_pred EecC
Q 006707 128 GFAA 131 (634)
Q Consensus 128 gis~ 131 (634)
+++.
T Consensus 135 ~fs~ 138 (457)
T 2yhx_A 135 TFXE 138 (457)
T ss_dssp ECCS
T ss_pred EEEE
Confidence 6655
No 47
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=96.68 E-value=0.0021 Score=67.99 Aligned_cols=80 Identities=21% Similarity=0.276 Sum_probs=58.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceeccC-CCChhhHHHHHHHH
Q 006707 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAILGA 560 (634)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~-~~ea~alGAA~lA~ 560 (634)
+++++..+++..++.+.-.++..++...-....++.|+++||+++.+.+.+.+.+.|+.+|.... ..++.|+|||+.|+
T Consensus 301 t~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~ 380 (383)
T 1dkg_D 301 TRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGG 380 (383)
T ss_dssp EHHHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTT
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHH
Confidence 45566555666666665555544443221123578999999999999999999999999987654 56789999999875
Q ss_pred h
Q 006707 561 V 561 (634)
Q Consensus 561 ~ 561 (634)
.
T Consensus 381 ~ 381 (383)
T 1dkg_D 381 V 381 (383)
T ss_dssp T
T ss_pred h
Confidence 3
No 48
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=96.66 E-value=0.0021 Score=65.53 Aligned_cols=66 Identities=21% Similarity=0.176 Sum_probs=47.8
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEec
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis 130 (634)
++||||+|.|++|++++| +|+++...+.+... ...++++.+++.+.+.+++++. .+..+|.+|+|+
T Consensus 1 ~~lgiDiGGT~~~~~l~d-~g~il~~~~~~~~~-----~~~~~~~~~~~~i~~~i~~~~~---~~~~~i~~igig 66 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAK-EGKSLGRFQTSGIN-----PFQQDRNEIDTALRSEVLPAIG---QKASSIRAVYFY 66 (291)
T ss_dssp CEEEEEECSSEEEEEEEE-TTEEEEEEEEECCC-----TTTSCHHHHHHHHTTTTHHHHT---TSTTTCCEEEEE
T ss_pred CEEEEEeCccceEEEEEe-CCeEEEEEECCCCC-----cccCCHHHHHHHHHHHHHHHhC---CCcccccEEEEE
Confidence 379999999999999999 99999877654310 1134788888888888876542 234567777664
No 49
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=96.52 E-value=0.0057 Score=63.24 Aligned_cols=64 Identities=23% Similarity=0.411 Sum_probs=50.0
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEec
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis 130 (634)
.++||||+|.|++|++++|.+|+++.+.+.+.+ ..+++++++.+.+.++++..+.+ .+.+|+|+
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~~~----~i~~igi~ 87 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTP--------HTSYSAFLDAVCELVEEADQRFG----VKGSVGIG 87 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECC--------CSCHHHHHHHHHHHHHHHHHHHT----SCCEEEEE
T ss_pred ceEEEEEECCCEEEEEEEeCCCCEEEEEEecCC--------CCCHHHHHHHHHHHHHHHHHhcC----CccEEEEE
Confidence 479999999999999999999999988776654 12578888888888888776532 35556554
No 50
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=96.48 E-value=0.0019 Score=68.26 Aligned_cols=76 Identities=14% Similarity=0.162 Sum_probs=52.8
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEE-EeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCc
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSA-SSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATC 133 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~-~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~~ 133 (634)
.++||||+|.|++|++++| +|+++.+. +.+++ .. +++++++.+.+.+. ++++. . ..+|.+|||+...
T Consensus 9 ~~~lgiDIGgt~i~~~l~d-~G~il~~~~~~~~~-------~~-~~~~~l~~i~~~~~-~i~~~-~-~~~i~gIGIavPG 76 (366)
T 3mcp_A 9 RIVMTLDAGGTNFVFSAIQ-GGKEIADPVVLPAC-------AD-CLDKCLGNLVEGFK-AIQAG-L-PEAPVAISFAFPG 76 (366)
T ss_dssp CEEEEEECSSSEEEEEEEE-TTEECSCCEEEECC-------TT-CHHHHHHHHHHHHH-HHHTT-C-SSCCCEEEEECCS
T ss_pred CEEEEEEECcceEEEEEEE-CCEEEEEEEEEECC-------CC-CHHHHHHHHHHHHH-HHHHH-h-hcCCeEEEEEecc
Confidence 5899999999999999999 99998776 55554 12 78888888777321 23322 1 1578888887642
Q ss_pred eeEEEcC-CCCce
Q 006707 134 SLVAVDA-DGSPV 145 (634)
Q Consensus 134 ~~V~~d~-~G~pl 145 (634)
++|. +|...
T Consensus 77 ---~Vd~~~G~i~ 86 (366)
T 3mcp_A 77 ---PADYQAGIIG 86 (366)
T ss_dssp ---SEETTTTEEC
T ss_pred ---eEeCCCCEEE
Confidence 3454 35543
No 51
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=96.28 E-value=0.0079 Score=60.91 Aligned_cols=53 Identities=21% Similarity=0.321 Sum_probs=42.9
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHH
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACS 115 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~ 115 (634)
++||||+|.|++|++++|.+|+++.+.+.+.+. ..+++++.+.+.+.++++++
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~il~~~~~~~~~-------~~~~~~~~~~i~~~i~~~~~ 54 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPTPA-------SQTPEALRDALSALVSPLQA 54 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECCS-------SCCHHHHHHHHHHHHTTTGG
T ss_pred eEEEEEeCCCEEEEEEECCCCCEEEEEEecCCC-------CCCHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999999887776641 23588888888777766654
No 52
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=96.20 E-value=0.0063 Score=67.15 Aligned_cols=83 Identities=22% Similarity=0.248 Sum_probs=61.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceecc-CCCChhhHHHHHHHH
Q 006707 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILP-RENESVLLGAAILGA 560 (634)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~-~~~ea~alGAA~lA~ 560 (634)
+++++..+++.+++.+.-.++..++...-....++.|+++||+++.+.+.+.+.+.|+.++... +..++.|+|||+.|+
T Consensus 270 tr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~ 349 (509)
T 2v7y_A 270 TRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGG 349 (509)
T ss_dssp EHHHHHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHH
Confidence 4566655566666666655555555443112357899999999999999999999999887654 456789999999998
Q ss_pred hhcC
Q 006707 561 VAAK 564 (634)
Q Consensus 561 ~~~g 564 (634)
.-.|
T Consensus 350 ~l~~ 353 (509)
T 2v7y_A 350 VIAG 353 (509)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 6544
No 53
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.10 E-value=0.0066 Score=61.63 Aligned_cols=58 Identities=14% Similarity=0.302 Sum_probs=42.6
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecC
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~ 131 (634)
++||||+|.|++|++++|.+|+++...+.+.+ .+++++.+.+.+.+++ .++.+|||+.
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~il~~~~~~~~---------~~~~~~~~~i~~~i~~---------~~i~gigi~~ 62 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGKILDKTSISTP---------ENLEDLLAWLDQRLSE---------QDYSGIAMSV 62 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCCEEEEEEECCC---------SSHHHHHHHHHHHHTT---------SCCSEEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEEeCC---------CCHHHHHHHHHHHHHh---------CCCcEEEEEe
Confidence 48999999999999999999999987665542 3567766665554432 4566777754
No 54
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=96.06 E-value=0.0076 Score=68.80 Aligned_cols=84 Identities=18% Similarity=0.307 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceecc-CCCChhhHHHHHHHH
Q 006707 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILP-RENESVLLGAAILGA 560 (634)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~-~~~ea~alGAA~lA~ 560 (634)
++.++..++..+++.+.-.++..++...-....++.|+++||+++.|.+.+++.+.||.++... +..++.|+|||+.|+
T Consensus 302 tr~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~ 381 (675)
T 3d2f_A 302 SREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICA 381 (675)
T ss_dssp EHHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHH
Confidence 4566665566666666666665555442111257899999999999999999999999988654 467799999999998
Q ss_pred hhcCC
Q 006707 561 VAAKR 565 (634)
Q Consensus 561 ~~~g~ 565 (634)
.-.+.
T Consensus 382 ~ls~~ 386 (675)
T 3d2f_A 382 IHSPT 386 (675)
T ss_dssp HTCSS
T ss_pred HhCCC
Confidence 76554
No 55
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=96.00 E-value=0.0014 Score=66.94 Aligned_cols=65 Identities=15% Similarity=0.090 Sum_probs=33.1
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecC
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~ 131 (634)
++||||+|.|++|++++| +|+++...+.+.... ...+++.+++.+.+.+++++. ..+|.+|+|+.
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~g~il~~~~~~~~~~-----~~~~~~~~~~~i~~~i~~~~~-----~~~i~~igig~ 65 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-NGAVIKRLGTKGINP-----FFQSEEEIQQKLTASLLPQLP-----EGKFNAVYFYG 65 (291)
T ss_dssp ---CEECCTTCEEEEEEC-SSSEEEEEEECCCCT-----TTSCSTTTTTTTTC------------------CEEEC
T ss_pred CEEEEEeccccEEEEEEc-CCeEEEEEECCCCCc-----ccCCHHHHHHHHHHHHHHhcC-----cccccEEEEEc
Confidence 479999999999999999 999998876543111 112334444555555555432 24566666643
No 56
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=95.84 E-value=0.023 Score=61.53 Aligned_cols=73 Identities=16% Similarity=0.214 Sum_probs=50.1
Q ss_pred CCcEEEEEecCCcccEEEEEcCCC-cE---EEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEE
Q 006707 53 SRSVFLGVDVGTGSARAGLFDESG-KL---LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVG 128 (634)
Q Consensus 53 ~~~~~LGIDiGTtsiKavl~d~~g-~v---l~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIg 128 (634)
.+..|||||+|.|++|+++++.+| +- +...+.+.|.. ....+.+++++.+.+++++.+++.+..... ..||
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~~ip~~----~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~-~~lG 140 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIPAE----KMSGSGTELFKYIAETLADFLENNGMKDKK-FDLG 140 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEECC-CCCCEEEEEEECCCTT----TTTSBHHHHHHHHHHHHHHHHHHTTCCSSC-EEEE
T ss_pred ccceEEEEEeCCCeEEEEEEecCCCCcceEEEEEEEecCCc----ccCCCHHHHHHHHHHHHHHHHHhcCCCccc-cceE
Confidence 345789999999999999999888 41 11223333321 123467999999999999999886643333 4555
Q ss_pred ec
Q 006707 129 FA 130 (634)
Q Consensus 129 is 130 (634)
|+
T Consensus 141 ~t 142 (451)
T 1bdg_A 141 FT 142 (451)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 57
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=95.80 E-value=0.016 Score=68.32 Aligned_cols=76 Identities=12% Similarity=0.201 Sum_probs=54.2
Q ss_pred CCcEEEEEecCCcccEEEEEcCCCc----E-EEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCC-eEE
Q 006707 53 SRSVFLGVDVGTGSARAGLFDESGK----L-LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEE-VKG 126 (634)
Q Consensus 53 ~~~~~LGIDiGTtsiKavl~d~~g~----v-l~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~-I~a 126 (634)
.+..+||||+|.|++|++++|.+|+ + +...+.+.|.. ..+.+.+++++.+.+++++++++.+..... ..+
T Consensus 76 E~G~~laiDlGGTnirv~lv~~~G~~~~~i~~~~~~~~ip~~----~~~~~~~~lf~~Ia~~i~~~l~~~~~~~~~~~lG 151 (917)
T 1cza_N 76 EKGDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPEN----IVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVG 151 (917)
T ss_dssp CCEEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEECCCHH----HHSSBHHHHHHHHHHHHHHHHHHHTCTTSCCCEE
T ss_pred CcceEEEEEeCCCeEEEEEEEecCCCcceEEEEEEEEECCcc----cccCCHHHHHHHHHHHHHHHHHhcCCCCCcccEE
Confidence 3457899999999999999998876 4 44545554421 012367899999999999998876543222 567
Q ss_pred EEecCC
Q 006707 127 VGFAAT 132 (634)
Q Consensus 127 Igis~~ 132 (634)
|+++..
T Consensus 152 i~fs~P 157 (917)
T 1cza_N 152 FTFSFP 157 (917)
T ss_dssp EEECSC
T ss_pred EEEccc
Confidence 888763
No 58
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=95.74 E-value=0.0048 Score=65.49 Aligned_cols=69 Identities=7% Similarity=0.068 Sum_probs=44.5
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHH---HHHHHHHHHHcCCCCCCeEEEEec
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAI---CAAVDSACSLANVDGEEVKGVGFA 130 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~---~~~l~~~l~~~~~~~~~I~aIgis 130 (634)
+++||||+|.|++|++++|.+ +++...+.+++.... .+++.+.+.+ .+.+.+++++.+....+|.+| ++
T Consensus 2 ~~vlgidiGgt~ik~al~d~~-~il~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~gI-i~ 73 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE-RMVKMQNFSHSPDEL-----GRFQKILDQLEFREKIARQFVEETGYSLSSFSAF-VS 73 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT-EEEEEEEEECCHHHH-----HTCSSGGGGHHHHHHHHHHHHHTTTCCGGGCSEE-EE
T ss_pred CeEEEEECCccceeEEEEecc-hheeeeecccCcccc-----cchhhHHHHHHHHHHHHHHHHHHcCCCccCceEE-Ee
Confidence 478999999999999999976 888887777642100 0111122223 566667776655444567776 53
No 59
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=95.69 E-value=0.016 Score=58.32 Aligned_cols=64 Identities=17% Similarity=0.274 Sum_probs=46.3
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
.+|+||+|.|++|..+||. ++++...+.+++ ....+++. ..++++++..+.+..+|.+|++|+.
T Consensus 3 MlL~IDIGNT~iK~gl~d~-~~l~~~~r~~T~--------~~t~de~~----~~l~~ll~~~~~~~~~I~~iiISSV 66 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG-DEIKLRFRHTSK--------VSTSDELG----IFLKSVLRENNCSPETIRKIAICSV 66 (266)
T ss_dssp CEEEEEECSSEEEEEEEET-TEEEEEEEEECS--------CCCHHHHH----HHHHHHHHTTTCCGGGCCEEEEEES
T ss_pred eEEEEEECCCeEEEEEEEC-CEEEEEEEecCC--------CCCHHHHH----HHHHHHHHHcCCChhhceEEEEecc
Confidence 4799999999999999996 577777666654 23455554 4456666766666678888888653
No 60
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=95.65 E-value=0.014 Score=65.01 Aligned_cols=82 Identities=16% Similarity=0.233 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhC-Cceecc-CCCChhhHHHHHHHH
Q 006707 483 EKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG-CPIILP-RENESVLLGAAILGA 560 (634)
Q Consensus 483 ~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg-~pV~~~-~~~ea~alGAA~lA~ 560 (634)
+.++..++..+++.+.-.++..++...-....++.|+++||+++.+.+.+++.+.|+ .++... +..++.|+|||+.|+
T Consensus 299 r~~~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378 (554)
T ss_dssp HHHHHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHH
Confidence 455544455555555544554444321111357899999999999999999999996 777654 466799999999998
Q ss_pred hhcC
Q 006707 561 VAAK 564 (634)
Q Consensus 561 ~~~g 564 (634)
.-.|
T Consensus 379 ~l~~ 382 (554)
T 1yuw_A 379 ILSG 382 (554)
T ss_dssp HTTS
T ss_pred HhcC
Confidence 7555
No 61
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=95.62 E-value=0.02 Score=64.10 Aligned_cols=78 Identities=23% Similarity=0.334 Sum_probs=55.5
Q ss_pred CcEEEEEecCCcccEEEEEc-CCCcEEEEEEeeecccc-CCC------ccc---cCHHH----HHHHHHHHHHHHHHHcC
Q 006707 54 RSVFLGVDVGTGSARAGLFD-ESGKLLGSASSPIQIWK-EGD------CIE---QSSTD----IWHAICAAVDSACSLAN 118 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d-~~g~vl~~~~~~~~~~~-~~g------~~e---qdp~~----~~~a~~~~l~~~l~~~~ 118 (634)
..|-++||||||.+.+.++| .+|+++++.+.-.|... ..+ ++. ...+. +.+++.+.+.++.++.+
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~~ 284 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEHG 284 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 35789999999999999999 78999999887766422 111 111 11223 45555566666666679
Q ss_pred CCCCCeEEEEecC
Q 006707 119 VDGEEVKGVGFAA 131 (634)
Q Consensus 119 ~~~~~I~aIgis~ 131 (634)
+++++|..+.+++
T Consensus 285 i~~~~I~~~~v~G 297 (631)
T 3zyy_X 285 VEKKEIMAAVVAG 297 (631)
T ss_dssp CCGGGEEEEEEEE
T ss_pred CCHHHeeEEEEEc
Confidence 9999999988865
No 62
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=95.29 E-value=0.011 Score=62.49 Aligned_cols=67 Identities=21% Similarity=0.135 Sum_probs=47.0
Q ss_pred CcEEEEEecCCcccEEEEEcC----CCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEe
Q 006707 54 RSVFLGVDVGTGSARAGLFDE----SGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~----~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgi 129 (634)
+.++||||+|.|++|++++|. +|+++...+. ++. .+++.+.+.+.+.++++.... ..+|.+|+|
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~-~~~--------~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi 95 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVHACVTRYS-MKR--------KDITEIIEFFNEIIELMPASV---MKRVKAGVI 95 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEE-CTT--------CBGGGHHHHHHHHHHHSCHHH---HTTEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEecccCCCccEEEEeee-cCC--------CCHHHHHHHHHHHHHHHhhcc---cccccEEEE
Confidence 468999999999999999998 8998876541 221 356667777777766554321 246877777
Q ss_pred cCC
Q 006707 130 AAT 132 (634)
Q Consensus 130 s~~ 132 (634)
+..
T Consensus 96 ~~p 98 (373)
T 2q2r_A 96 NVP 98 (373)
T ss_dssp EES
T ss_pred Eee
Confidence 643
No 63
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=95.08 E-value=0.014 Score=57.25 Aligned_cols=58 Identities=9% Similarity=0.072 Sum_probs=37.5
Q ss_pred CcEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecC
Q 006707 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~ 131 (634)
+.++||||+|.|++| ++|.+|++ ..+.+++ .+.+++.+.+.+.+. +++ .++.+|||+.
T Consensus 5 ~~~~lgiDIGGT~i~--~~d~~g~~--~~~~~t~-------~~~~~~~~~~~i~~~----i~~-----~~i~gigi~~ 62 (226)
T 3lm2_A 5 DQTVLAIDIGGSHVK--IGLSTDGE--ERKVESG-------KTMTGPEMVAAVTAM----AKD-----MTYDVIAMGY 62 (226)
T ss_dssp GCCEEEEEECSSEEE--EEETTTCC--EEEEECC-------TTCCHHHHHHHHHHH----TTT-----CCCSEEEEEE
T ss_pred CCEEEEEEECCCEEE--EEECCCCE--EEEEECC-------CCCCHHHHHHHHHHH----HHh-----CCCCEEEEEE
Confidence 358999999999999 57888876 2333333 235677766655444 332 1566777754
No 64
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=95.04 E-value=0.0061 Score=68.77 Aligned_cols=52 Identities=27% Similarity=0.456 Sum_probs=44.6
Q ss_pred CCccEEEEecCCCCCHHHHHHHHHhhCCceecc-CCCChhhHHHHHHHHhhcC
Q 006707 513 HKIDTLLACGGLAKNPLFLQQHADIIGCPIILP-RENESVLLGAAILGAVAAK 564 (634)
Q Consensus 513 ~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~-~~~ea~alGAA~lA~~~~g 564 (634)
..++.|+++||+++.|.+.+++.+.||.++... ...++.|+|||+.|+.-.|
T Consensus 332 ~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~ 384 (605)
T 2kho_A 332 SDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTG 384 (605)
T ss_dssp TTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTT
T ss_pred hhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcC
Confidence 357899999999999999999999999887654 4667899999999986544
No 65
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=94.92 E-value=0.047 Score=56.50 Aligned_cols=32 Identities=31% Similarity=0.335 Sum_probs=26.5
Q ss_pred CcEEEEEecCCcccEEEEEc-CCCcEEEEEEee
Q 006707 54 RSVFLGVDVGTGSARAGLFD-ESGKLLGSASSP 85 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d-~~g~vl~~~~~~ 85 (634)
+.|+||||+|.|++|++++| .+|+++...+.+
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~~~ 45 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGEISQAKTYS 45 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred CCEEEEEEechhheEEEEEECCCCcEEEEEEec
Confidence 46999999999999999999 589988755443
No 66
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=94.76 E-value=0.011 Score=61.34 Aligned_cols=76 Identities=16% Similarity=0.101 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----C-c-cEEEEecCCCCCHHHHHHHHHhhCCceeccC-CCChhhHH
Q 006707 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGH----K-I-DTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLG 554 (634)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~----~-~-~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~-~~ea~alG 554 (634)
+++++..+++..++.+.-.++..++. .+. . + +.|+++||+++.+.+.+.+.+.|+.||.+.. ..++.++|
T Consensus 242 ~~~~~~~~~~~~~~~i~~~i~~~l~~---~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~G 318 (344)
T 1jce_A 242 KGGEVREALRSVVVAIVESVRTTLEK---TPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKG 318 (344)
T ss_dssp EHHHHHHHTHHHHHHHHHHHHHHHHT---SCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHh---CCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHH
Confidence 34565555666666666555555442 221 1 2 5899999999999999999999999998764 56689999
Q ss_pred HHHHHH
Q 006707 555 AAILGA 560 (634)
Q Consensus 555 AA~lA~ 560 (634)
||++|.
T Consensus 319 aa~~a~ 324 (344)
T 1jce_A 319 AGMVLD 324 (344)
T ss_dssp HHHGGG
T ss_pred HHHHHh
Confidence 998775
No 67
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=94.36 E-value=0.096 Score=56.97 Aligned_cols=76 Identities=21% Similarity=0.376 Sum_probs=48.7
Q ss_pred CCCcEEEEEecCCcccEEEEEcCCCcE-EEEEEeeeccccCCCcc-ccCHHHHHHHHHHHHHHHHHHcCCCC-CCeEEEE
Q 006707 52 RSRSVFLGVDVGTGSARAGLFDESGKL-LGSASSPIQIWKEGDCI-EQSSTDIWHAICAAVDSACSLANVDG-EEVKGVG 128 (634)
Q Consensus 52 m~~~~~LGIDiGTtsiKavl~d~~g~v-l~~~~~~~~~~~~~g~~-eqdp~~~~~a~~~~l~~~l~~~~~~~-~~I~aIg 128 (634)
-++..||+||+|.|++|+++++.+|+- ....+..+++ |... .-+.+++++.+.+++.+.+++.+.+. .+...+|
T Consensus 77 ~E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~I---p~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~l~lG 153 (485)
T 3o8m_A 77 KETGDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRL---PDHLRTGTSEQLWSFIAKCLKEFVDEWYPDGVSEPLPLG 153 (485)
T ss_dssp CCEEEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEEC---CTTGGGSBHHHHHHHHHHHHHHHHHHHCTTCCSSCEEEE
T ss_pred CcceEEEEEEecCCeEEEEEEEECCCCceEEEEEEEec---CchhccCCHHHHHHHHHHHHHHHHHHhcccccccccceE
Confidence 344579999999999999999976651 1111222221 1112 22478999999999999998864322 3344455
Q ss_pred ec
Q 006707 129 FA 130 (634)
Q Consensus 129 is 130 (634)
|+
T Consensus 154 ft 155 (485)
T 3o8m_A 154 FT 155 (485)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 68
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=94.28 E-value=0.16 Score=54.49 Aligned_cols=65 Identities=17% Similarity=0.222 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CCCCccEEEEecCCCCCHHHHHHHHHhhCCceeccC
Q 006707 482 SEKQLALLYLATVQGIAYGTRHIVEHCNA------HGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR 546 (634)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~~~~l~~------~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~ 546 (634)
++.++..++++.+|-+.-.++..++.... ....++.|+++||+|+-+.+.+++++.||+||.+..
T Consensus 290 s~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~ 360 (419)
T 4a2a_A 290 TAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGC 360 (419)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEe
Confidence 35677778889999999888888887653 133568899999999999999999999999998644
No 69
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=94.21 E-value=0.041 Score=59.08 Aligned_cols=77 Identities=6% Similarity=0.056 Sum_probs=55.5
Q ss_pred CcEEEEEecCCcccEEEEEcC--CC-cEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEec
Q 006707 54 RSVFLGVDVGTGSARAGLFDE--SG-KLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~--~g-~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis 130 (634)
.++++||||||+++|+++... +| ++++....|-.-. ..|. -.|.+...+++.++++++=+.++....+-+.++++
T Consensus 7 ~~~ivglDIGts~I~~vv~~~~~~~~~i~g~~~~~s~gv-~~G~-I~di~~~~~~I~~av~~ae~~~g~~i~~~v~v~i~ 84 (419)
T 4a2a_A 7 TVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGL-DEGE-IKDAIAFKESVNTLLKELEEQLQKSLRSDFVISFS 84 (419)
T ss_dssp CCEEEEEEECSSEEEEEEEEC----CEEEEEEEEECCSE-ETTE-ESBHHHHHHHHHHHHHHHHHHHTSCCCSEEEEEEC
T ss_pred CCEEEEEEccCCEEEEEEEEEcCCCCEEEEEEEeccCCe-eCCE-EEcHHHHHHHHHHHHHHHHHHcCCCcCceEEEEEc
Confidence 468999999999999999973 23 6777776653211 3443 36899999999999888766677665552467887
Q ss_pred CC
Q 006707 131 AT 132 (634)
Q Consensus 131 ~~ 132 (634)
+.
T Consensus 85 g~ 86 (419)
T 4a2a_A 85 SV 86 (419)
T ss_dssp CT
T ss_pred CC
Confidence 76
No 70
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=94.02 E-value=0.11 Score=54.35 Aligned_cols=62 Identities=11% Similarity=0.020 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCccEEEEecCCCCCHHHHHHHHHhhCCceecc
Q 006707 484 KQLALLYLATVQGIAYGTRHIVEHCNA--HGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILP 545 (634)
Q Consensus 484 ~~~~~~~rAvlEgia~~~r~~~~~l~~--~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~ 545 (634)
+++..+++..++.+.-.++..++.+.. ....++.|+++||+++.+.+.+++++.|+.||.+.
T Consensus 274 ~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~ 337 (377)
T 2ych_A 274 GRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPV 337 (377)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEec
Confidence 344446678899999888888886632 23468999999999999999999999999999875
No 71
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=94.01 E-value=0.11 Score=61.23 Aligned_cols=76 Identities=18% Similarity=0.321 Sum_probs=51.4
Q ss_pred CCCcEEEEEecCCcccEEEEEcCC-Cc--EEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEE
Q 006707 52 RSRSVFLGVDVGTGSARAGLFDES-GK--LLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVG 128 (634)
Q Consensus 52 m~~~~~LGIDiGTtsiKavl~d~~-g~--vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIg 128 (634)
-.+..|||||+|.|++|+++++.+ |+ ++...+..+.+-.. ...-+.+++++.+.+++.+.+++.+.....+ .||
T Consensus 523 ~E~G~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~~~~~~ip~~--~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~l-~lG 599 (917)
T 1cza_N 523 TENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIE--IMQGTGEELFDHIVSCISDFLDYMGIKGPRM-PLG 599 (917)
T ss_dssp CCCEEEEEEEESSSSEEEEEEEEECSTTCEEEEEEEEECCCHH--HHTSBHHHHHHHHHHHHHHHHHHHTCCSSCC-EEE
T ss_pred CcceEEEEEEECCCcEEEEEEEeCCCcceeEEeeeeEEecCcc--cccCCHHHHHHHHHHHHHHHHHHcCCCccce-eEE
Confidence 344578999999999999999975 64 66544444432100 0123568899999999999998766544444 455
Q ss_pred ec
Q 006707 129 FA 130 (634)
Q Consensus 129 is 130 (634)
|+
T Consensus 600 ~t 601 (917)
T 1cza_N 600 FT 601 (917)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 72
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=93.94 E-value=0.072 Score=52.92 Aligned_cols=61 Identities=21% Similarity=0.372 Sum_probs=41.7
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecC
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~ 131 (634)
.+|+||+|-|++|..++| +++++...+.+++ .....+++...+...++. +..+|.+|.||+
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~~l~~~~r~~T~-------~~~t~de~~~~l~~l~~~-------~~~~i~~i~IsS 64 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DGKTFRRWRLSTG-------VFQTEDELFSHLHPLLGD-------AMREIKGIGVAS 64 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SSSSCEEEEEECC-------TTCCHHHHHHHHHHHHGG-------GGGGEEEEEEEE
T ss_pred eEEEEEECCCeEEEEEEE-CCEEEEEEEecCC-------CCCCHHHHHHHHHHHHhh-------ccccCCEEEEEc
Confidence 479999999999999998 5566666665554 234567776655444432 235677777754
No 73
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=93.81 E-value=0.37 Score=50.32 Aligned_cols=81 Identities=19% Similarity=0.293 Sum_probs=54.8
Q ss_pred CCCcEEEEEecCCc--ccEEEEEcCCC---cEEEEEEeeeccc------c--CCCcccc-CH----HHHHHHHHHHHHHH
Q 006707 52 RSRSVFLGVDVGTG--SARAGLFDESG---KLLGSASSPIQIW------K--EGDCIEQ-SS----TDIWHAICAAVDSA 113 (634)
Q Consensus 52 m~~~~~LGIDiGTt--siKavl~d~~g---~vl~~~~~~~~~~------~--~~g~~eq-dp----~~~~~a~~~~l~~~ 113 (634)
|+..++||+=-||| ++-+++++.+| +++...++|||.. . .++..+. .. .++=+...++++++
T Consensus 2 ~~~~~~iGlMSGTSlDGiD~alv~~~~~~~~~~~~~~~pyp~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~av~~~ 81 (370)
T 3cqy_A 2 MNKAYYIGLMSGTSMDGVDAVLVDFAGEQPQLIGTHTETIPTHLLKGLQRLCLPGTDEINRLGRLDRSVGKLFALAVNNL 81 (370)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEECSSSSCEEEEEEEECCCHHHHHHHHGGGCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecccchhhHeEEEEEEeCCeEEEEeeeeecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 66678999999998 58999998765 4788888888631 1 2221110 01 11233444677788
Q ss_pred HHHcCCCCCCeEEEEecCC
Q 006707 114 CSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 114 l~~~~~~~~~I~aIgis~~ 132 (634)
+++.++++++|.+||.-+|
T Consensus 82 l~~~~~~~~~i~~IGsHGQ 100 (370)
T 3cqy_A 82 LAKTKIAKDEIIAIGSHGQ 100 (370)
T ss_dssp HHHHCCCGGGEEEEEEEEE
T ss_pred HHHcCCCcccccEEEeCCc
Confidence 8888888899999998554
No 74
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=93.70 E-value=0.11 Score=52.10 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhh
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVA 562 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~ 562 (634)
.++-|.+..+..+++++++.-.+.-+|+++||.+ ++++..+..+..+ .++-+..|-.+++..-
T Consensus 191 Gi~~g~~g~i~~~i~~~~~e~~~~~~vi~TGG~a------~~l~~~~~~~~~~--~~~LvL~GL~~i~~~n 253 (268)
T 2h3g_X 191 GILYGYVGQVEGIVKRMKEEAKQEPKVIATGGLA------KLISEESNVIDVV--DPFLTLKGLYMLYERN 253 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSSCCEEEEESTTH------HHHHHHCSSCSEE--CTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCH------HHHHhhCCCCCEE--CcchHHHHHHHHHHhc
Confidence 6666667777777777764322456899999987 5667777765554 3567888988776553
No 75
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=93.27 E-value=0.18 Score=52.80 Aligned_cols=71 Identities=13% Similarity=0.045 Sum_probs=46.3
Q ss_pred cEEEEEecCCcccEEEEEcCCCc--EEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecC
Q 006707 55 SVFLGVDVGTGSARAGLFDESGK--LLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~--vl~~~~~~~~~~~-~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~ 131 (634)
+.++|||+||+++|+++++ +|+ +......++|... ..|. -.|++.+.+++.+++++ .+....+ ..+++++
T Consensus 13 ~~~vgiDiGt~~i~~~~~~-~~~~~i~~~g~~~~ps~~~~~g~-i~d~~~~~~~ik~~~~~----~~~~~~~-v~~~i~~ 85 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVS-GNPPALKALASRPTPPGLLMEGM-VAEPAALAQEIKELLLE----ARTRKRY-VVTALSN 85 (377)
T ss_dssp CCCEEEEECSSEEEEEEEE-TTTTEEEEEEEEECCTTSEETTE-ESCHHHHHHHHHHHHHH----HTCCCCE-EEEEECG
T ss_pred CceEEEEeCCCeEEEEEEe-CCceEEEEEEeEECCCCcccCCC-cCCHHHHHHHHHHHHHH----cCCCcce-EEEEecC
Confidence 4579999999999999996 554 5555556665433 4443 36888877766655544 4544444 3567766
Q ss_pred C
Q 006707 132 T 132 (634)
Q Consensus 132 ~ 132 (634)
.
T Consensus 86 ~ 86 (377)
T 2ych_A 86 L 86 (377)
T ss_dssp G
T ss_pred C
Confidence 4
No 76
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=93.14 E-value=0.17 Score=52.93 Aligned_cols=84 Identities=13% Similarity=0.098 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhC-CceeccCC-----CChhhHHH
Q 006707 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG-CPIILPRE-----NESVLLGA 555 (634)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg-~pV~~~~~-----~ea~alGA 555 (634)
+++++. +-+.|=.|..+...++.+. .++++|+++|||++|+.+++.++..+. .+|...+. .---|+.-
T Consensus 257 s~~Dv~---ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aF 330 (371)
T 3qbx_A 257 PAADIQ---ATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAF 330 (371)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHH
Confidence 456643 3666655555555554432 346899999999999999999999985 77776542 22347777
Q ss_pred HHHHHhhc-CCCCCHHH
Q 006707 556 AILGAVAA-KRYSSLIE 571 (634)
Q Consensus 556 A~lA~~~~-g~~~~~~e 571 (634)
|++|...+ |.-.++..
T Consensus 331 A~LA~~~l~g~p~~lp~ 347 (371)
T 3qbx_A 331 AWLAHRFLERLPGNCPD 347 (371)
T ss_dssp HHHHHHHHTTCCCSCHH
T ss_pred HHHHHHHHcCCCCCCCc
Confidence 88887654 33344543
No 77
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=92.92 E-value=0.23 Score=51.32 Aligned_cols=80 Identities=18% Similarity=0.201 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhh---CCceeccC----CCChhhHHH
Q 006707 483 EKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILPR----ENESVLLGA 555 (634)
Q Consensus 483 ~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl---g~pV~~~~----~~ea~alGA 555 (634)
+.+++ +++.+.++-.+....+.+.+. ...++|.++||.+.|..+++.+.+.+ |.+|++++ .+.+.++|+
T Consensus 217 ~~diA---a~fq~~l~~~l~~~~~~~~~~-~~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~ 292 (330)
T 2ivn_A 217 VEDLA---YSFQETAFAALVEVTERAVAH-TEKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAY 292 (330)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHH
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHH
Confidence 45644 367777666666666554321 23579999999999999999999887 77887765 355778998
Q ss_pred HHHHHhhcCCC
Q 006707 556 AILGAVAAKRY 566 (634)
Q Consensus 556 A~lA~~~~g~~ 566 (634)
|....+..|..
T Consensus 293 a~~~~~~~~~~ 303 (330)
T 2ivn_A 293 TGLRMYKAGIS 303 (330)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHhcCCC
Confidence 87666555543
No 78
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=92.78 E-value=0.41 Score=49.55 Aligned_cols=83 Identities=14% Similarity=0.138 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhh---CCceeccC----CCChhhHHH
Q 006707 483 EKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILPR----ENESVLLGA 555 (634)
Q Consensus 483 ~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl---g~pV~~~~----~~ea~alGA 555 (634)
+.+++ +++.+.++-.+...++...+. ...++|.++||.+.|..+++.+.+.+ |..|++++ .+.+.++|+
T Consensus 222 ~~diA---asfq~~l~~~l~~~~~~a~~~-~g~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~ 297 (334)
T 3eno_A 222 IEDIS---YSIQETAFAMLVEVLERALYV-SGKDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQ 297 (334)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHHHHHHH-HTCSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHH
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHH-cCCCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHH
Confidence 45544 366666666665555543321 23579999999999999999999988 77888754 456889999
Q ss_pred HHHHHhhcCCCCCH
Q 006707 556 AILGAVAAKRYSSL 569 (634)
Q Consensus 556 A~lA~~~~g~~~~~ 569 (634)
|....+-.|...++
T Consensus 298 a~~~~~~~g~~~~~ 311 (334)
T 3eno_A 298 AALLMYKSGVRMSV 311 (334)
T ss_dssp HHHHHHHTTCCCCG
T ss_pred HHHHHHHcCCCCCc
Confidence 98777766765543
No 79
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=92.56 E-value=0.35 Score=49.94 Aligned_cols=74 Identities=16% Similarity=0.244 Sum_probs=51.0
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccc-cCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecC
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIE-QSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~e-qdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~ 131 (634)
++||||.++..++++|++. |++++....++. .+..|... .....=.+.+..++++++++.+++..+|.+|+++.
T Consensus 2 ~iLgIdts~~~~~val~~~-g~i~~~~~~~~~-~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~ 76 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE-DKVLANVFDTLT-TEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQ 76 (330)
T ss_dssp CEEEEECSSSEEEEEEECS-SCEEEEEEEECC-CTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEE
T ss_pred EEEEEEccCCCeEEEEEEC-CEEEEEEEEEee-cccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEEC
Confidence 4899999999999999984 578876555443 11234321 11222344566778888888898889999998753
No 80
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=91.64 E-value=0.58 Score=52.66 Aligned_cols=76 Identities=22% Similarity=0.358 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhh-CCceeccC----CCChhhHHHH
Q 006707 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILPR----ENESVLLGAA 556 (634)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl-g~pV~~~~----~~ea~alGAA 556 (634)
.+.+++ +++.++++-.+....+.+.+. ..+++|.++||.++|..+++.+.+.+ |.+|+.+. .+.+.++|.|
T Consensus 571 ~~~dIA---asFh~ala~~L~~~~~ra~~~-~g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA 646 (657)
T 3ttc_A 571 PVNQRA---WAFHDALAQGFAALMREQATM-RGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQG 646 (657)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHHHT-TTCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHHH-cCCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHH
Confidence 456654 477888887777776655432 34579999999999999999999998 88887643 5668899999
Q ss_pred HHHHh
Q 006707 557 ILGAV 561 (634)
Q Consensus 557 ~lA~~ 561 (634)
++|+.
T Consensus 647 ~~a~~ 651 (657)
T 3ttc_A 647 VIAAA 651 (657)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98864
No 81
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=91.60 E-value=0.43 Score=54.78 Aligned_cols=72 Identities=14% Similarity=0.227 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhh---CCceeccC----CCChhhHHHHHHHHhhcC
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILPR----ENESVLLGAAILGAVAAK 564 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl---g~pV~~~~----~~ea~alGAA~lA~~~~g 564 (634)
++.++++-.+....+.+.+. ..+++|.++||.+.|..+++.+.+.+ |.+|+.+. .+.+.++|.|+.|+...+
T Consensus 672 sFq~ala~~L~~~~~~a~~~-~g~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 672 KFHNTVVNFTYDLANLIRKE-TGINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 55555655555555443321 23579999999999999999998887 78887754 456789999999876543
No 82
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=91.34 E-value=0.36 Score=49.46 Aligned_cols=69 Identities=10% Similarity=0.111 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCC---ceeccC-CCChhhHHHHHHH
Q 006707 485 QLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGC---PIILPR-ENESVLLGAAILG 559 (634)
Q Consensus 485 ~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~---pV~~~~-~~ea~alGAA~lA 559 (634)
.+..++++.++.++-.+... +++. ..++.|+++||+|+ .+.+.+.+.|+. ++.++. ..++.|+|+|+.+
T Consensus 247 ~~~~~i~~~~~~~~~~i~~~---i~~~-~~~~~vvl~GGga~--ll~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 247 IVTEAMNEALRKLEQRVLNT---LNEF-SGYTHVMVIGGGAE--LICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HTTC-CCCCEEEEESTTHH--HHHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHhh-cCCCeEEEECChHH--HHHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 33334445555554444333 3332 35689999999986 488999999998 576655 4568999999864
No 83
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=90.71 E-value=0.44 Score=54.85 Aligned_cols=75 Identities=20% Similarity=0.312 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhh---CCceecc----CCCChhhHHHHHHHHhhcC
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILP----RENESVLLGAAILGAVAAK 564 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl---g~pV~~~----~~~ea~alGAA~lA~~~~g 564 (634)
++-+.++-.+...+..+.+. ..+++|.++||.+.|..+++.+.+.+ |..|+++ ..+.+.|+|.|++|+..+.
T Consensus 684 sfQ~al~~~L~~~~~~a~~~-tg~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L~ 762 (772)
T 4g9i_A 684 SAHLALARAFAHTAVERARE-FGVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYLE 762 (772)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TTCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHHh
Confidence 55555555555554444332 34678999999999999999998875 5677664 3456789999999998776
Q ss_pred CCC
Q 006707 565 RYS 567 (634)
Q Consensus 565 ~~~ 567 (634)
-|.
T Consensus 763 ~~l 765 (772)
T 4g9i_A 763 GYL 765 (772)
T ss_dssp TSS
T ss_pred ccC
Confidence 554
No 84
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=89.75 E-value=0.5 Score=48.87 Aligned_cols=79 Identities=18% Similarity=0.261 Sum_probs=53.3
Q ss_pred CCCcEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCcccc-CHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEec
Q 006707 52 RSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQ-SSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (634)
Q Consensus 52 m~~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eq-dp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis 130 (634)
|.+.++||||-.+.-+-++|++ ++++++.....+.. +.+|.+.. ....=.+.+...+++++++.+++..+|.+|+++
T Consensus 3 ~~~M~iLgIdts~~~~svAl~~-~~~i~~~~~~~~~~-~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~ 80 (334)
T 3eno_A 3 MDPMIVLGLEGTAHTISCGIID-ESRILAMESSMYRP-KTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFS 80 (334)
T ss_dssp CCCCEEEEEECSSSEEEEEEEE-SSCCCEEEEEECCC-SSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEE
T ss_pred ccCceEEEEECCCcCeEEEEEE-CCEEEEEEEEeecc-ccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 3334799999999889999998 55788765444321 22343211 112223456678888888889999999999987
Q ss_pred CC
Q 006707 131 AT 132 (634)
Q Consensus 131 ~~ 132 (634)
..
T Consensus 81 ~g 82 (334)
T 3eno_A 81 MG 82 (334)
T ss_dssp CS
T ss_pred cC
Confidence 64
No 85
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=87.95 E-value=1.2 Score=47.68 Aligned_cols=64 Identities=16% Similarity=0.135 Sum_probs=44.5
Q ss_pred CCCCcEEEEEecCCcccEEEEEcCCCcEEEEEEeee--ccccCCCccccCHHHHHHHHHHHHHHHHHHcCC
Q 006707 51 ARSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPI--QIWKEGDCIEQSSTDIWHAICAAVDSACSLANV 119 (634)
Q Consensus 51 ~m~~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~--~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~ 119 (634)
.-++..||+||+|.|++|+++++..|. +...+..| |..... -..+++++.+.+++.+.+++.+.
T Consensus 55 G~E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~~ip~~~~~----g~~~~LFd~Ia~~i~~fl~~~~~ 120 (445)
T 3hm8_A 55 GSERGDFLALDLGGTNFRVLLVRVTTG-VQITSEIYSIPETVAQ----GSGQQLFDHIVDCIVDFQQKQGL 120 (445)
T ss_dssp SCCCEEEEEEEESSSSEEEEEEEESSS-EEEEEEEECCCHHHHT----SBHHHHHHHHHHHHHHHHHHHTC
T ss_pred CceeeEEEEEEecCCeEEEEEEEECCc-eEEEEEEeccCccccC----CCHHHHHHHHHHHHHHHHHHhCc
Confidence 344457899999999999999997665 23223333 221111 24688999999999999987653
No 86
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=87.13 E-value=1.4 Score=48.70 Aligned_cols=79 Identities=20% Similarity=0.198 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCC-ceecc--CCCChhhHHHHHHH
Q 006707 483 EKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGC-PIILP--RENESVLLGAAILG 559 (634)
Q Consensus 483 ~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~-pV~~~--~~~ea~alGAA~lA 559 (634)
..+++. ++-+.++-.+......+.+. ..+++|.++||.+.|..+++.+....+. .|.++ ..+.+.++|+|+.|
T Consensus 280 ~~dIAa---sfQ~~l~~~L~~~~~~a~~~-tg~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a 355 (576)
T 3ven_A 280 YRDLAA---TAQAALERAVFGLADSVLAR-TGERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAV 355 (576)
T ss_dssp GHHHHH---HHHHHHHHHHHHHHHHHHHH-HTCSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHH
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHH-cCCCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHH
Confidence 356554 55555544444444433221 2367999999999999999998887665 66654 35568899999999
Q ss_pred HhhcCC
Q 006707 560 AVAAKR 565 (634)
Q Consensus 560 ~~~~g~ 565 (634)
.+..|.
T Consensus 356 ~~~~g~ 361 (576)
T 3ven_A 356 AVELGD 361 (576)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 876654
No 87
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=87.04 E-value=0.92 Score=48.99 Aligned_cols=66 Identities=14% Similarity=0.170 Sum_probs=44.6
Q ss_pred CCCcEEEEEecCCcccEEEEEcCCCc-----EEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCC
Q 006707 52 RSRSVFLGVDVGTGSARAGLFDESGK-----LLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANV 119 (634)
Q Consensus 52 m~~~~~LGIDiGTtsiKavl~d~~g~-----vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~ 119 (634)
-++..||+||+|.|+.|+++++..|. .+...+..|++-. ....-..+++++.+.+++.+.+++.+.
T Consensus 74 ~E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~--~l~~gt~~eLFd~IA~~i~~fl~~~~~ 144 (470)
T 3f9m_A 74 SEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPE--DAMTGTAEMLFDYISECISDFLDKHQM 144 (470)
T ss_dssp CCCEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCH--HHHSSBHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCCh--HhccCCHHHHHHHHHHHHHHHHhhccc
Confidence 34457899999999999999985442 3333333443210 011235789999999999999987653
No 88
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=86.46 E-value=1.9 Score=39.11 Aligned_cols=24 Identities=38% Similarity=0.480 Sum_probs=21.4
Q ss_pred EEEEEecCCcccEEEEEcCCCcEE
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLL 79 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl 79 (634)
-+||||.|+..++.++.|..|.+.
T Consensus 4 riLGiDpG~~riGvAv~d~~g~~a 27 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDEMGWTA 27 (150)
T ss_dssp EEEEEEECSSEEEEEEECTTSSSE
T ss_pred EEEEEEccCCEEEEEEEECCCCEE
Confidence 489999999999999999988753
No 89
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=83.55 E-value=0.93 Score=45.83 Aligned_cols=64 Identities=13% Similarity=0.132 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAIL 558 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~l 558 (634)
+-+-|+.-.... ..++......++|.++|...-...+.+.++ .+|.++...+..+++..|-..+
T Consensus 226 ~~LSGlLIG~El--aa~~~~~~~~~~v~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~~~~~~~GL~~~ 289 (295)
T 3nuw_A 226 EFLSGLLIGAEV--ATLSDTFAGQQAISLVAGSSLTSRYQQAFA-AIGREVSAVAGDTAFQTGIRSI 289 (295)
T ss_dssp HHHHHHHHHHHH--HHHTTTSCCSSCEEEEECHHHHHHHHHHHH-HTTCCEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHhhccCCCeEEEEeCHHHHHHHHHHHH-HcCCCceecCHHHHHHHHHHHH
Confidence 556665544321 122221123467999999888888888886 4899987766566665564443
No 90
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=83.52 E-value=0.95 Score=46.47 Aligned_cols=68 Identities=12% Similarity=-0.052 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCccEEEEecCCCCCHHHHHHHHHhhCCcee-----c-cC-CCChhhHHH
Q 006707 484 KQLALLYLATVQGIAYGTRHIVEHCN-AHGHKIDTLLACGGLAKNPLFLQQHADIIGCPII-----L-PR-ENESVLLGA 555 (634)
Q Consensus 484 ~~~~~~~rAvlEgia~~~r~~~~~l~-~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~-----~-~~-~~ea~alGA 555 (634)
.+..++.+.+.|.+.-.+...++.+- +.+. ++|+++|++ +.+...+|+. +|+. + ++ ..-+.|+|+
T Consensus 246 ~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~--~~vv~aG~G---~~L~~~la~~--~~~~~~~~~i~~~~s~vapA~av 318 (334)
T 3cet_A 246 IDAENIAKNYYELWKELILENVENVAEKYGS--KKVVITGLG---ENILKDALAD--FEVISVAERYGKDVSLATPSFAV 318 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEEEESTT---HHHHHHHTTT--SEEEEHHHHHCHHHHHSHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CeEEEeCCc---HHHHHHHHhh--CCeeehhcccCcccccccCHHHH
Confidence 34444556788877777777665543 3333 389999988 4666777766 7776 4 22 233678888
Q ss_pred HHH
Q 006707 556 AIL 558 (634)
Q Consensus 556 A~l 558 (634)
|++
T Consensus 319 A~l 321 (334)
T 3cet_A 319 AEL 321 (334)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 91
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=83.19 E-value=1 Score=46.27 Aligned_cols=70 Identities=16% Similarity=0.119 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcC
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAK 564 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g 564 (634)
+-+-|+.-.... ..++......+.|.++|...-...+.+.++ .+|.++...+..+++..|-..+|.....
T Consensus 238 ~~LSGLLIG~El--aa~~~~~~~~~~V~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~d~a~~~GL~~~a~~~~~ 307 (330)
T 3t69_A 238 AQLSGTLIGLEI--AGALAGSGSVDGVCLVGSGGLGTLYRTALE-SQGLNVRAVDADEAVRAGLSAAARAIWP 307 (330)
T ss_dssp HHHHHHHHHHHH--HHHHTTCSSCCEEEEEECHHHHHHHHHHHH-HTTCEEEEEEHHHHHHHHHHHHHHHHSC
T ss_pred HHHHhHHHHHHH--HHHHhcccCCCeEEEEeCHHHHHHHHHHHH-HcCCCceeeCHHHHHHHHHHHHHHHHHH
Confidence 556665544321 122222223468999999988888888886 4899998877677777786665554433
No 92
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=82.76 E-value=3.4 Score=45.49 Aligned_cols=78 Identities=13% Similarity=0.172 Sum_probs=52.8
Q ss_pred CCCcEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccC-HHHHHHHHHHHHHHHHHHcCCCCCCeEEEEec
Q 006707 52 RSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQS-STDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (634)
Q Consensus 52 m~~~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqd-p~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis 130 (634)
|++.++||||-.+..+-++|++.++++++....... .+.+|-+... ...-.+.+...+++++++ ++..+|.+|+++
T Consensus 3 m~~m~iL~i~ts~~~~~~al~~~~~~~~~~~~~~~~-~~~gg~~p~~a~~~h~~~l~~~i~~~l~~--~~~~~id~ia~~ 79 (540)
T 3en9_A 3 MDPMICLGLEGTAEKTGVGIVTSDGEVLFNKTIMYK-PPKQGINPREAADHHAETFPKLIKEAFEV--VDKNEIDLIAFS 79 (540)
T ss_dssp CCSCEEEEEECSSSEEEEEEEETTSCEEEEEEEECC-CCCSSSSCCCHHHHHHHHHHHHHHHHHHH--SCGGGCCEEEEE
T ss_pred cccceEEEEEcCccceEEEEEECCCeEEEEEEEeec-CCCCCCChHHHHHHHHHHHHHHHHHHHHh--CCHhHCcEEEEe
Confidence 433479999999999999999988788887765432 1123433222 233455666777777776 567889999887
Q ss_pred CC
Q 006707 131 AT 132 (634)
Q Consensus 131 ~~ 132 (634)
..
T Consensus 80 ~g 81 (540)
T 3en9_A 80 QG 81 (540)
T ss_dssp EE
T ss_pred cC
Confidence 53
No 93
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=81.69 E-value=3.8 Score=41.94 Aligned_cols=69 Identities=12% Similarity=0.119 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCC-ccEEEEecCCCCCHHHHHHHHHhhCCceeccCCC-ChhhHHHHHHHHh
Q 006707 490 YLATVQGIAYGTRHIVEHCNAHGHK-IDTLLACGGLAKNPLFLQQHADIIGCPIILPREN-ESVLLGAAILGAV 561 (634)
Q Consensus 490 ~rAvlEgia~~~r~~~~~l~~~g~~-~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~-ea~alGAA~lA~~ 561 (634)
++..++-.+-.+...+... ....+ .+.|+++||+|. ++.+.+.+.|+.++.+.+.+ .+.|+|+..++..
T Consensus 254 i~~~~~e~~~~I~~~i~~~-~~~~~~~~~IvltGGGA~--l~~~~l~~~~~~~v~v~~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 254 IKKVKEKFLKDAIKLIEKR-GFKLDQLDSLIFIGGTTQ--KLKEQISKTYPNNSIITNNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TCCTTSCSEEEEESTTHH--HHHHHHHHHSTTCEECCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHc-CCCHHHccEEEEECChHH--HHHHHHHHHcCCCCEecCCChhhHHHHHHHHHhh
Confidence 3455555554444444433 22222 579999999986 56799999999889887744 4889998876543
No 94
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=80.43 E-value=2.5 Score=43.18 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=18.3
Q ss_pred EEEEEecCCcccEEEEEcC-CC
Q 006707 56 VFLGVDVGTGSARAGLFDE-SG 76 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~-~g 76 (634)
.+.+||+||.++|..+++. ++
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~ 34 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDG 34 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETT
T ss_pred EEEEEEECcCcEEEEEEEEcCC
Confidence 5789999999999999994 45
No 95
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=79.97 E-value=3.6 Score=41.97 Aligned_cols=74 Identities=16% Similarity=0.117 Sum_probs=39.8
Q ss_pred CCCcEEEEEecCCcccEEEEEcC-CCc--EEEEEEeeecccc---CCCccccCHHHH---HHHHHHHHHHHHHHcCCCCC
Q 006707 52 RSRSVFLGVDVGTGSARAGLFDE-SGK--LLGSASSPIQIWK---EGDCIEQSSTDI---WHAICAAVDSACSLANVDGE 122 (634)
Q Consensus 52 m~~~~~LGIDiGTtsiKavl~d~-~g~--vl~~~~~~~~~~~---~~g~~eqdp~~~---~~a~~~~l~~~l~~~~~~~~ 122 (634)
|+ +.+.+||+||.++|.++++. ++. ++...+.+..... ..|. .+++.+ ++++ ..+++.++..++ .
T Consensus 2 m~-~~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~--ls~eai~r~~~~L-~~f~~~~~~~~v--~ 75 (315)
T 3mdq_A 2 MS-QRIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGF--ITEEAMDRALDTL-KKFRVILDEHAV--V 75 (315)
T ss_dssp ---CEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTC--CCHHHHHHHHHHH-HHHHHHHHHTTC--C
T ss_pred CC-ceEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCC--cCHHHHHHHHHHH-HHHHHHHHHcCC--C
Confidence 54 45789999999999999984 343 3344333332211 2232 233333 3333 233455555554 5
Q ss_pred CeEEEEecC
Q 006707 123 EVKGVGFAA 131 (634)
Q Consensus 123 ~I~aIgis~ 131 (634)
+|.+++-++
T Consensus 76 ~v~~vATsA 84 (315)
T 3mdq_A 76 HVIATGTSA 84 (315)
T ss_dssp EEEEEECHH
T ss_pred EEEEEeeHH
Confidence 677776544
No 96
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=79.25 E-value=1.3 Score=44.77 Aligned_cols=26 Identities=12% Similarity=0.050 Sum_probs=21.5
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEE
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGS 81 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~ 81 (634)
.+.+|||+|+|.+|+++++ +++++..
T Consensus 20 ~~~iGIDiGsTt~K~V~~~-~~~i~~~ 45 (287)
T 2ews_A 20 HMKVGIDAGGTLIKIVQEQ-DNQRTFK 45 (287)
T ss_dssp -CEEEEEECSSEEEEEEEC-SSCEEEE
T ss_pred CeEEEEEEChhhEEEEEEc-CCEEEEE
Confidence 3689999999999999994 6677755
No 97
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=77.68 E-value=2.9 Score=47.97 Aligned_cols=65 Identities=23% Similarity=0.418 Sum_probs=43.2
Q ss_pred CCCcEEEEEecC-CcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEe
Q 006707 52 RSRSVFLGVDVG-TGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (634)
Q Consensus 52 m~~~~~LGIDiG-TtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgi 129 (634)
...+.+||||-| .|++|++++|++|+++..... ||.-+ ..+ |+.....|.+++.+.. -++.+||-
T Consensus 326 ~~~~~vlg~dpg~r~g~k~a~vd~~G~~l~~~~i-y~~~~-----~~~----~~~~~~~l~~li~~~~---~~~IaIGn 391 (785)
T 3bzc_A 326 AGPRATLGLDPGLRTGVKVAVVDATGKLLDTATV-YPHAP-----KNQ----WDQTLAVLAALCAKHQ---VELIAIGN 391 (785)
T ss_dssp CCSCCEEEEECCSSSCEEEEEECTTSCEEEEEEE-CCSGG-----GCC----HHHHHHHHHHHHHHHT---CCEEEEES
T ss_pred CCCCeEEEECCCCcCceEEEEECCCCCEEEEEEE-ecCCc-----hhH----HHHHHHHHHHHHHHcC---CCEEEECC
Confidence 334579999999 699999999999999987654 33211 111 3333456667777653 34556665
No 98
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=76.37 E-value=4.4 Score=40.53 Aligned_cols=70 Identities=14% Similarity=0.051 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhh-CCceeccCCCChhhHHHHHHHHhh
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILPRENESVLLGAAILGAVA 562 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl-g~pV~~~~~~ea~alGAA~lA~~~ 562 (634)
.+++-.+..+-..+..+... ..++.|++.||.++++.+.+.+...+ ..+|..+...+++++|||.+|...
T Consensus 218 ~il~~~~~~La~~i~~l~~~-l~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 218 DILKQGAELLASQAVYLARK-IGTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDLGKRSPEIGAVILAYKE 288 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HTCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEECCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEECCccCcHHHHHHHHHHCCCCeEeccCCCCChHHHHHHHHHHh
Confidence 44554444444444433221 25678999999887666665555544 347776654467899999998765
No 99
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=76.20 E-value=1.2 Score=47.12 Aligned_cols=25 Identities=16% Similarity=0.298 Sum_probs=18.8
Q ss_pred CCCCcEEEEEecCCcccEEEEEcCCCc
Q 006707 51 ARSRSVFLGVDVGTGSARAGLFDESGK 77 (634)
Q Consensus 51 ~m~~~~~LGIDiGTtsiKavl~d~~g~ 77 (634)
.|. +.++|||+|||+++++++ .+|+
T Consensus 10 ~m~-~~vvGIDlGTt~s~va~~-~~g~ 34 (409)
T 4gni_A 10 PGE-RVVIGITFGNSNSSIAHT-VDDK 34 (409)
T ss_dssp ----CCEEEEEECSSEEEEEEE-ETTE
T ss_pred CCC-CcEEEEEcCCCeEEEEEE-eCCc
Confidence 454 579999999999999998 4553
No 100
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=75.94 E-value=4.9 Score=40.09 Aligned_cols=58 Identities=14% Similarity=0.020 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCceeccCCCChhhHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAIL 558 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~l 558 (634)
.++-|.+..+..+++++++.-.+.-+|+++||.++ ++++.+. +..+ .++-+..|-.++
T Consensus 210 Gi~~g~~g~Ie~~i~~~~~e~~~~~~vi~TGG~a~------~l~~~~~-~~~~--d~~LvL~GL~~i 267 (271)
T 2f9w_A 210 GCLLMLRGFVREQYAMACELLGPDCEIFLTGGDAE------LVRDELA-GARI--MPDLVFVGLALA 267 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCEEEEESTTGG------GTGGGCT-TCEE--CTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHH------HHHhhCC-CCEE--CcChHHHHHHHH
Confidence 67777777777777777542224458999999874 4556666 4333 345666676554
No 101
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=75.65 E-value=7.3 Score=40.87 Aligned_cols=47 Identities=11% Similarity=-0.017 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCC-CCHHHHHHHHHh
Q 006707 491 LATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLA-KNPLFLQQHADI 537 (634)
Q Consensus 491 rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a-~s~~~~Qi~Adv 537 (634)
+-++|..+|.++..+-.+...-..++.|+++||.+ +++.+++.+.+-
T Consensus 300 ~la~d~f~yriak~Iga~aa~LG~vDaIVfTGGIgEns~~vr~~I~~~ 347 (398)
T 4ijn_A 300 KLAYDVYIHRLRKYIGAYMAVLGRTDVISFTAGVGENVPPVRRDALAG 347 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcEEEECCccccccHHHHHHHHHH
Confidence 46888888988887766644213689999999988 456566655443
No 102
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=75.48 E-value=4 Score=44.65 Aligned_cols=71 Identities=10% Similarity=0.091 Sum_probs=46.3
Q ss_pred eeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCccEEEEecCCCCCHHHHHHHHHhhCC-ceec
Q 006707 472 GIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHG-----HKIDTLLACGGLAKNPLFLQQHADIIGC-PIIL 544 (634)
Q Consensus 472 g~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g-----~~~~~I~~~GG~a~s~~~~Qi~Advlg~-pV~~ 544 (634)
..+..+...++-++ .+++|--+.-..|- +..++.++... ..+..|+++||+|+-+.+.|+..++|+. +|.+
T Consensus 505 ~~L~~I~~R~~vEE-lelVR~~ak~~vfv-~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRi 581 (607)
T 1nbw_A 505 GELVPIDNASPLEK-IRLVRRQAKEKVFV-TNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVA 581 (607)
T ss_dssp TEEEEECCSSCHHH-HHHHHHHHHHHHHH-HHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEE
T ss_pred cceeeeCCCcchHH-HHHHHHHHhhhhhh-HHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEE
Confidence 55556654444455 44555544444443 22344554322 2348999999999999999999999999 8875
No 103
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=74.29 E-value=9.2 Score=41.95 Aligned_cols=75 Identities=12% Similarity=0.106 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHH-HhCCCCccEEEEecCCCCCHHHHHHHHHhh---CCceeccC----CCChhhHHHHHHHHhh
Q 006707 491 LATVQGIAYGTRHIVEHC-NAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILPR----ENESVLLGAAILGAVA 562 (634)
Q Consensus 491 rAvlEgia~~~r~~~~~l-~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl---g~pV~~~~----~~ea~alGAA~lA~~~ 562 (634)
+++.+.++-.+....+.. +.. ..++|.++||.+.|..+++.+...+ |..|+.++ .+.++.+|.+-.-...
T Consensus 226 ~~fq~~~~~~l~~~~~~a~~~~--~~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~~~~~~Dngamia~~~~~~~~ 303 (540)
T 3en9_A 226 YSLQEYAFSMLTEITERALAHT--NKGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWLGLLMHK 303 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--TCSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCCHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--CCCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCHHHHHHHHHHHHH
Confidence 366666665555544433 233 3579999999999999999998876 67888764 3445556655433344
Q ss_pred cCCCC
Q 006707 563 AKRYS 567 (634)
Q Consensus 563 ~g~~~ 567 (634)
.|...
T Consensus 304 ~g~~s 308 (540)
T 3en9_A 304 NGRWM 308 (540)
T ss_dssp TCCCC
T ss_pred cCCCC
Confidence 44443
No 104
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=73.74 E-value=8.9 Score=40.09 Aligned_cols=46 Identities=11% Similarity=0.086 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCccEEEEecCCCC-CHHHHHHHHHh
Q 006707 491 LATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLAK-NPLFLQQHADI 537 (634)
Q Consensus 491 rAvlEgia~~~r~~~~~l~~-~g~~~~~I~~~GG~a~-s~~~~Qi~Adv 537 (634)
+-++|..+|+++..+-.+.. .| .++-|+++||... ++.+++.+.+-
T Consensus 291 ~lA~d~f~yri~k~Iga~aa~Lg-~vDaIVfTGGIgens~~vR~~i~~~ 338 (391)
T 3r9p_A 291 QLAYSVFTHRLRKYIGAYLAVLG-HTDVISFTAGIGENDAAVRRDAVSG 338 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-SCCEEEEEHHHHHHCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECcccccCCHHHHHHHHHH
Confidence 36788899998887766643 44 6899999999886 57677665443
No 105
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=73.60 E-value=3.6 Score=43.49 Aligned_cols=46 Identities=9% Similarity=0.161 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCCccEEEEecCCC-CCHHHHHHHHHh
Q 006707 492 ATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADI 537 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~-~g~~~~~I~~~GG~a-~s~~~~Qi~Adv 537 (634)
-++|..+|+++..+-.+-. .+.+++-|++|||.. +++.+++.+.+-
T Consensus 316 lA~d~f~yri~k~IGa~aa~L~G~vDaIVFTgGIGEns~~vR~~v~~~ 363 (415)
T 3sk3_A 316 RAMDVYCHRLAKYIGSYTALMDGRLDAVVFTGGIGENAAMVRELSLGK 363 (415)
T ss_dssp HHHHHHHHHHHHHHHHGGGGSTTCCCEEEEEHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCEEEECCccccCCHHHHHHHHhh
Confidence 6789999999988877654 566799999999987 567776666554
No 106
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=72.62 E-value=9.5 Score=36.52 Aligned_cols=63 Identities=13% Similarity=0.269 Sum_probs=44.8
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
.+|+||-.|..+-++|++ +|+++...... . .+..+. +...+++++++.++...+|.+|+++.-
T Consensus 3 ~iLaIdTS~~~~svAl~~-~~~~~~~~~~~-~--------~~Hs~~----L~p~i~~~L~~a~~~~~dld~Iav~~G 65 (213)
T 3r6m_A 3 KILAIDTATENCSVALLV-NDQVISRSEVA-P--------RDHTKK----VLPMVDEVLKEAGLTLQDLDALAFGRG 65 (213)
T ss_dssp CEEEEECSSSEEEEEEES-SSCEEEEEEEC-C--------SCCHHH----HHHHHHHHHHTTTCCTTTCSEEEEEEE
T ss_pred EEEEEEccCcceEEEEEE-CCEEEEEEEec-h--------HHHHHH----HHHHHHHHHHHcCCCHHHccEEEEecC
Confidence 389999999999999998 47777653211 1 122333 345677888888888999999998753
No 107
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=72.49 E-value=3 Score=43.05 Aligned_cols=67 Identities=10% Similarity=0.103 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHH-HHhCCCCccEEEEecCCCCCHHHHHHHHHhhCCcee---ccCCCChhhHHHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEH-CNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPII---LPRENESVLLGAAILGA 560 (634)
Q Consensus 492 AvlEgia~~~r~~~~~-l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~---~~~~~ea~alGAA~lA~ 560 (634)
.++|.++-.+...++. ++.....++.|+++||+|+- +.+.+.+.|+.... ..+..++.|+|+..++.
T Consensus 273 ~~i~~~~~~i~~~i~~~l~~~~~~i~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 273 PILEDLANRIIENIRLNLRGEVDRVTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGGGEEEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 4455555444444433 33322245899999999873 77888999984433 33344789999987653
No 108
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=71.16 E-value=7.2 Score=40.56 Aligned_cols=82 Identities=17% Similarity=0.135 Sum_probs=53.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhh-CCceeccCC-----CChhhHHH
Q 006707 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILPRE-----NESVLLGA 555 (634)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl-g~pV~~~~~-----~ea~alGA 555 (634)
+++++. +-+.|=.|..+.+.++.+ . ..++|+++|||++|+.+++.++..+ +.+|...+. ..--|+.-
T Consensus 264 ~~~Dv~---ATLt~~TA~sIa~~~~~~---~-~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF 336 (370)
T 3cqy_A 264 NEEDIQ---STLLDLTCHSIAQDILKL---A-QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF 336 (370)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHH---C-SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHhc---C-CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH
Confidence 356643 466676666655555544 2 4569999999999999999999999 557755331 22346666
Q ss_pred HHHHHhhc-CCCCCHH
Q 006707 556 AILGAVAA-KRYSSLI 570 (634)
Q Consensus 556 A~lA~~~~-g~~~~~~ 570 (634)
|++|...+ |.-.++.
T Consensus 337 A~LA~~~l~g~p~nlp 352 (370)
T 3cqy_A 337 AWLAMRYQLGLPANLP 352 (370)
T ss_dssp HHHHHHHHTTCCCCCH
T ss_pred HHHHHHHHcCCCCCCC
Confidence 77777554 3333443
No 109
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=69.72 E-value=8.7 Score=41.95 Aligned_cols=75 Identities=15% Similarity=0.150 Sum_probs=41.6
Q ss_pred CcEEEEEecCCcccEEEEEcC-CCc--EEEEEEeeecccc---CCCccccCHHHHHHHHHHHHHHHHHHc-CCCCCCeEE
Q 006707 54 RSVFLGVDVGTGSARAGLFDE-SGK--LLGSASSPIQIWK---EGDCIEQSSTDIWHAICAAVDSACSLA-NVDGEEVKG 126 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~-~g~--vl~~~~~~~~~~~---~~g~~eqdp~~~~~a~~~~l~~~l~~~-~~~~~~I~a 126 (634)
.+.+.+||+||.|+|.++++. ++. ++...+.+..... ..|. .+++.+ +..+++|++..+.. +....+|.+
T Consensus 10 ~~~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~--Ls~eai-~r~~~~L~~f~~~~~~~~v~~v~~ 86 (513)
T 1u6z_A 10 PQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNM--LSEEAM-TRGLNCLSLFAERLQGFSPASVCI 86 (513)
T ss_dssp --CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCC--BCHHHH-HHHHHHHHHHHHHTTTCCGGGEEE
T ss_pred CCeEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCC--cCHHHH-HHHHHHHHHHHHHHHhCCCCEEEE
Confidence 346899999999999999994 443 3444444433221 2232 334433 33345555544432 223457888
Q ss_pred EEecC
Q 006707 127 VGFAA 131 (634)
Q Consensus 127 Igis~ 131 (634)
++-++
T Consensus 87 vATsA 91 (513)
T 1u6z_A 87 VGTHT 91 (513)
T ss_dssp EECHH
T ss_pred EecHH
Confidence 87765
No 110
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=68.27 E-value=13 Score=37.25 Aligned_cols=71 Identities=15% Similarity=0.134 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhC------CceeccC-CCChhhHHHHHHHHhhc
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG------CPIILPR-ENESVLLGAAILGAVAA 563 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg------~pV~~~~-~~ea~alGAA~lA~~~~ 563 (634)
.+++-.+..+-..+..+... ..++.|++.||.++.+.+.+.+-..+. .+|.... ..++.++|||.++....
T Consensus 216 ~~~~~~~~~La~~i~~l~~~-~~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~~ 293 (297)
T 4htl_A 216 RLITEFYTGICTGLYNLIYL-FDPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQEE 293 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHHh
Confidence 45554444444444433321 346789999998876666655444442 2444444 35689999999887543
No 111
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=67.23 E-value=12 Score=37.96 Aligned_cols=69 Identities=22% Similarity=0.175 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCC-HHHHHHHHHhh----------CCceeccC-CCChhhHHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN-PLFLQQHADII----------GCPIILPR-ENESVLLGAAILG 559 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s-~~~~Qi~Advl----------g~pV~~~~-~~ea~alGAA~lA 559 (634)
.+++-.+..+...+..+... ..++.|++.||.++. +.+.+.+-+.+ ..+|.... ..++.++|||.++
T Consensus 239 ~~~~~~~~~La~~i~~l~~~-ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 239 AVWADIGTIIGESLVNIVRV-MDLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HCCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 45555555555544444322 346889999998875 55554443322 23455544 3468899999988
Q ss_pred Hh
Q 006707 560 AV 561 (634)
Q Consensus 560 ~~ 561 (634)
..
T Consensus 318 ~~ 319 (321)
T 3r8e_A 318 ME 319 (321)
T ss_dssp HC
T ss_pred Hh
Confidence 64
No 112
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=66.85 E-value=15 Score=37.30 Aligned_cols=72 Identities=17% Similarity=0.055 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcc--------EEEEecCCCCC-HHHHHHH----HHhh-------CCceeccCCCChh
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKID--------TLLACGGLAKN-PLFLQQH----ADII-------GCPIILPRENESV 551 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~--------~I~~~GG~a~s-~~~~Qi~----Advl-------g~pV~~~~~~ea~ 551 (634)
.+++-.+..+...+..+... ..++ .|++.||.+++ +.+.+.+ .+.. ..+|......+++
T Consensus 236 ~il~~~~~~La~~i~~l~~~-~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~a~ 314 (347)
T 2ch5_A 236 YIFRKAGEMLGRHIVAVLPE-IDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSS 314 (347)
T ss_dssp HHHHHHHHHHHHHHHHHGGG-SCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESSCT
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCCCh
Confidence 55555555555555544332 3455 78888888764 4444332 2221 2356555545588
Q ss_pred hHHHHHHHHhhcC
Q 006707 552 LLGAAILGAVAAK 564 (634)
Q Consensus 552 alGAA~lA~~~~g 564 (634)
++|||.+|...++
T Consensus 315 ~~GAa~la~~~~~ 327 (347)
T 2ch5_A 315 ALGGASLGARHIG 327 (347)
T ss_dssp HHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhcC
Confidence 9999999876554
No 113
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=66.64 E-value=5.9 Score=40.91 Aligned_cols=20 Identities=30% Similarity=0.400 Sum_probs=17.9
Q ss_pred cEEEEEecCCcccEEEEEcC
Q 006707 55 SVFLGVDVGTGSARAGLFDE 74 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~ 74 (634)
+.+.+||+||.|+|..+++.
T Consensus 16 ~~~A~IDiGSNsiRL~I~~~ 35 (343)
T 3cer_A 16 VTVAGIDCGTNSIRLKIARV 35 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEE
T ss_pred CeEEEEEcccceeEeEEEEE
Confidence 36889999999999999984
No 114
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=65.39 E-value=12 Score=36.30 Aligned_cols=63 Identities=14% Similarity=0.261 Sum_probs=43.4
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
.+|+||-.|..+-++|++ +|+++... .... ....+. +...+++++++.++...+|.+|+++..
T Consensus 2 ~iL~idTs~~~~sval~~-~~~~~~~~-~~~~--------~~h~~~----l~~~i~~~L~~a~~~~~did~Iav~~G 64 (231)
T 2gel_A 2 RILAIDTATEACSVALWN-NGTINAHF-ELCP--------REHTQR----ILPMVQEILAASGASLNEIDALAFGRG 64 (231)
T ss_dssp EEEEEECSSSEEEEEEEE-TTEEEEEE-EECC--------SCCHHH----HHHHHHHHHHHTTCCGGGCSEEEEECC
T ss_pred eEEEEECCCcCeEEEEEE-CCEEEEEE-hhhh--------HHHHHH----HHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 589999999889999998 56665421 1111 112233 445677778888888899999999764
No 115
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=64.60 E-value=15 Score=39.93 Aligned_cols=72 Identities=15% Similarity=0.116 Sum_probs=41.2
Q ss_pred cEEEEEecCCcccEEEEEcC-CC--cEEEEEEeeecccc---CCCccccCHHHH---HHHHHHHHHHHHHHcCCCCCCeE
Q 006707 55 SVFLGVDVGTGSARAGLFDE-SG--KLLGSASSPIQIWK---EGDCIEQSSTDI---WHAICAAVDSACSLANVDGEEVK 125 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~-~g--~vl~~~~~~~~~~~---~~g~~eqdp~~~---~~a~~~~l~~~l~~~~~~~~~I~ 125 (634)
+.+.+||+||.|+|.++++. ++ +++...+.....-. ..|. .+++.+ ++++. .+++.++..++ .+|.
T Consensus 15 ~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~--Ls~eai~r~~~~L~-~F~~~~~~~~v--~~v~ 89 (508)
T 3hi0_A 15 APVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGR--MHEEGVTRALMALR-RFHVLSEQAQA--QKLY 89 (508)
T ss_dssp CCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSS--CCHHHHHHHHHHHH-HHHHHHHHTTC--SEEE
T ss_pred CeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCC--cCHHHHHHHHHHHH-HHHHHHHhCCC--CeEE
Confidence 45889999999999999994 33 45554443332211 1222 233333 33332 33355666554 5787
Q ss_pred EEEecC
Q 006707 126 GVGFAA 131 (634)
Q Consensus 126 aIgis~ 131 (634)
+++-++
T Consensus 90 ~vATsA 95 (508)
T 3hi0_A 90 VLATAA 95 (508)
T ss_dssp EEECTH
T ss_pred EEeeHH
Confidence 777655
No 116
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=64.29 E-value=3 Score=46.06 Aligned_cols=23 Identities=30% Similarity=0.570 Sum_probs=19.3
Q ss_pred CCCcEEEEEecCCcccEEEEEcC
Q 006707 52 RSRSVFLGVDVGTGSARAGLFDE 74 (634)
Q Consensus 52 m~~~~~LGIDiGTtsiKavl~d~ 74 (634)
|++..++|||+|||+..+++++.
T Consensus 1 M~m~~~iGIDlGTt~s~va~~~~ 23 (554)
T 1yuw_A 1 MSKGPAVGIDLGTTYSCVGVFQH 23 (554)
T ss_dssp CCSCCCEEEEECSSEEEEEEECS
T ss_pred CCCCCEEEEEeCcccEEEEEEEC
Confidence 55557899999999999999863
No 117
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=63.15 E-value=21 Score=35.25 Aligned_cols=69 Identities=13% Similarity=0.103 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhh------------CCceeccC-CCChhhHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII------------GCPIILPR-ENESVLLGAAIL 558 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl------------g~pV~~~~-~~ea~alGAA~l 558 (634)
.+++-.+..+...+..+... ..++.|++.||.+.++.+.+.+...+ ..+|.... ..++.++|||.+
T Consensus 206 ~i~~~~~~~L~~~i~~l~~~-l~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~ 284 (292)
T 2gup_A 206 EAIERMNRNLAQGLLNIQYL-IDPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVN 284 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHH
Confidence 34444444444433333221 24578888888876666654333322 24555544 456789999998
Q ss_pred HHh
Q 006707 559 GAV 561 (634)
Q Consensus 559 A~~ 561 (634)
|..
T Consensus 285 ~~~ 287 (292)
T 2gup_A 285 WLQ 287 (292)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 118
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=62.38 E-value=13 Score=36.80 Aligned_cols=68 Identities=15% Similarity=0.250 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhC-------CceeccC-CCChhhHHHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG-------CPIILPR-ENESVLLGAAILGA 560 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg-------~pV~~~~-~~ea~alGAA~lA~ 560 (634)
.+++-.+..+...+..+... ..++.|++.||.+.++.+.+.+...+. .+|.... ..+++++|||.++.
T Consensus 212 ~i~~~~~~~L~~~i~~l~~~-l~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 212 QLIHRSARTLARLIADIKAT-TDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 34444444444444333221 245678888887766666655544432 3444444 35688999999874
No 119
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=62.20 E-value=31 Score=37.68 Aligned_cols=72 Identities=10% Similarity=0.078 Sum_probs=47.4
Q ss_pred eeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---C--CCccEEEEecCCCCCHHHHHHHHHhhCC-ceecc
Q 006707 472 GIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAH---G--HKIDTLLACGGLAKNPLFLQQHADIIGC-PIILP 545 (634)
Q Consensus 472 g~~~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~~---g--~~~~~I~~~GG~a~s~~~~Qi~Advlg~-pV~~~ 545 (634)
..+..+...++-++ .+++|--+.-..|- +..++.++.. + ..+..|+++||+|+-+.+.|+..++|+. +|.+-
T Consensus 503 ~~L~~I~pR~~vEE-lelVR~~ak~~vfv-~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRiG 580 (610)
T 2d0o_A 503 DELVPLPGDLALEK-VRAIRRSAKERVFV-TNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAG 580 (610)
T ss_dssp SCEEECCTTCCHHH-HHHHHHHHHHHHHH-HHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEEE
T ss_pred cceeeeCCCcchHH-HHHHHHHHhhhhhh-HHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEe
Confidence 55666755444455 44555544444443 2234455432 2 2348999999999999999999999999 88763
No 120
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=61.26 E-value=3.7 Score=42.74 Aligned_cols=22 Identities=27% Similarity=0.602 Sum_probs=18.5
Q ss_pred cEEEEEecCCcccEEEEEcCCCc
Q 006707 55 SVFLGVDVGTGSARAGLFDESGK 77 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~ 77 (634)
+.++|||+|||++++++++ +|+
T Consensus 18 ~~viGID~GTt~s~va~~~-~g~ 39 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMK-NGK 39 (394)
T ss_dssp CSCEEEEECSSEEEEEEEC-SSC
T ss_pred CCEEEEEeCcCcEEEEEEE-CCe
Confidence 4689999999999999987 444
No 121
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=61.02 E-value=31 Score=35.03 Aligned_cols=68 Identities=16% Similarity=0.153 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhh---------CCceeccCCCChhhHHHHHHHHhh
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---------GCPIILPRENESVLLGAAILGAVA 562 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl---------g~pV~~~~~~ea~alGAA~lA~~~ 562 (634)
.+++-.+..+...+..+... ..++.|++.||.+ +.+.+.+...+ ..+|......+++++|||.++...
T Consensus 263 ~il~~~~~~La~~i~~l~~~-l~P~~IvlgG~i~--~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~~~~GAa~l~~~~ 339 (343)
T 2yhw_A 263 SILRTAGTALGLGVVNILHT-MNPSLVILSGVLA--SHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMVLDY 339 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TCCSEEEEESTTH--HHHHHHHHHHHHHHSCGGGTTCEEEECCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCCcH--HHHHHHHHHHHHHhcccccCCcEEEEccCCCchHHHHHHHHHHH
Confidence 45555555555555444332 3567888888876 33433332211 356666655678899999988654
No 122
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=60.87 E-value=9.2 Score=39.76 Aligned_cols=76 Identities=17% Similarity=0.184 Sum_probs=52.3
Q ss_pred cEEEEEecCCc--ccEEEEEcCCC--cEEEEEEeeeccc------c--CCCccccCHH-------HHHHHHHHHHHHHHH
Q 006707 55 SVFLGVDVGTG--SARAGLFDESG--KLLGSASSPIQIW------K--EGDCIEQSST-------DIWHAICAAVDSACS 115 (634)
Q Consensus 55 ~~~LGIDiGTt--siKavl~d~~g--~vl~~~~~~~~~~------~--~~g~~eqdp~-------~~~~a~~~~l~~~l~ 115 (634)
.++||+=-||| ++-+++++.++ +++....+||+.. . .++. .+++ ++=+...++++++++
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~~~~~~l~~~~~~py~~~lr~~l~~~~~~~~--~~~~~~~~l~~~lg~~~a~av~~~l~ 79 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMPAGLREDILALCVPGP--DEIARAAEVEQRWVALAAQGVRELLL 79 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEESSSEEEEEEEEEECCHHHHHHHHHTTSCCB--THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecccChhhhhEEEEEecCCceecceeeecCCHHHHHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999997 68888887555 6777778888631 1 2221 1122 222344567778888
Q ss_pred HcCCCCCCeEEEEecCC
Q 006707 116 LANVDGEEVKGVGFAAT 132 (634)
Q Consensus 116 ~~~~~~~~I~aIgis~~ 132 (634)
+.++++++|.+||.-+|
T Consensus 80 ~~~~~~~~Id~IGsHGQ 96 (371)
T 3qbx_A 80 QQQMSPDEVRAIGSHGQ 96 (371)
T ss_dssp HTTCCGGGCCEEEECCE
T ss_pred HcCCCcccccEEEeCCc
Confidence 88888899999999775
No 123
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=60.77 E-value=6.3 Score=42.40 Aligned_cols=59 Identities=10% Similarity=0.199 Sum_probs=35.8
Q ss_pred CcEEEEEecCCcccEEEEEcC-CC-----cEEEEEEeeeccccCCCc--cccCHHHHHHHHHHHHHHHH
Q 006707 54 RSVFLGVDVGTGSARAGLFDE-SG-----KLLGSASSPIQIWKEGDC--IEQSSTDIWHAICAAVDSAC 114 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~-~g-----~vl~~~~~~~~~~~~~g~--~eqdp~~~~~a~~~~l~~~l 114 (634)
.+|.+.||+||+++|..|++- ++ .++.... .... ..+|. ...+|+.+.+.+..+++.+.
T Consensus 33 ~~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~~-~~~~-~~~Gls~~~~~pe~~~~~l~~Ll~~a~ 99 (456)
T 3cj1_A 33 LKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHS-SCDV-QGGGISSYANDPSKAGQSLVRCLEQAL 99 (456)
T ss_dssp EEEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEEE-EEEC-SSSCGGGGTTSTHHHHHHTHHHHHHHH
T ss_pred ceEEEEEEcCCCCeEEEEEEEcCCCCCCccceeeee-eeee-cccccccccCCHHHHHHHHHHHHHHHH
Confidence 368899999999999999983 22 1222211 1111 02332 22578888877777776654
No 124
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=60.73 E-value=20 Score=37.76 Aligned_cols=47 Identities=15% Similarity=0.247 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCC-CCHHHHHHHHHhh
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLA-KNPLFLQQHADII 538 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a-~s~~~~Qi~Advl 538 (634)
-++|..+|.++..+-.+-..=..++-|++|||.. +++.+++.+.+-+
T Consensus 308 lA~d~f~yri~k~IGa~aa~LggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 308 LAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccccCHHHHHHHHhhH
Confidence 5889999999888877754324689999999988 8888887776543
No 125
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=60.64 E-value=6.2 Score=41.02 Aligned_cols=46 Identities=26% Similarity=0.366 Sum_probs=35.9
Q ss_pred cEEEEecCCCCCHHHHHHHHHhhC--------CceeccC-CCChhhHHHHHHHHh
Q 006707 516 DTLLACGGLAKNPLFLQQHADIIG--------CPIILPR-ENESVLLGAAILGAV 561 (634)
Q Consensus 516 ~~I~~~GG~a~s~~~~Qi~Advlg--------~pV~~~~-~~ea~alGAA~lA~~ 561 (634)
++|+++||.|+-+-+.+.+.+-++ .+|..+. ...++++|++++|..
T Consensus 295 ~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 295 ANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 349 (375)
T ss_dssp TCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHC
T ss_pred hCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhCc
Confidence 579999999999999998888776 3343333 456899999999873
No 126
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=60.56 E-value=17 Score=36.48 Aligned_cols=69 Identities=17% Similarity=0.236 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCC-CHHHHHHHHHhh----------CCceeccC-CCChhhHHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAK-NPLFLQQHADII----------GCPIILPR-ENESVLLGAAILG 559 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~-s~~~~Qi~Advl----------g~pV~~~~-~~ea~alGAA~lA 559 (634)
.+++-.+..+...+..+... ..++.|++.||.++ ++.+.+.+...+ ..+|.... ..++.++|||.+|
T Consensus 241 ~i~~~~~~~L~~~i~~l~~~-l~p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 319 (326)
T 2qm1_A 241 MVVDRVCFYLGLATGNLGNT-LNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLA 319 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHH
Confidence 45555555555444443321 24578999999875 566554443322 24555544 3457899999987
Q ss_pred Hh
Q 006707 560 AV 561 (634)
Q Consensus 560 ~~ 561 (634)
..
T Consensus 320 ~~ 321 (326)
T 2qm1_A 320 LQ 321 (326)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 127
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=60.48 E-value=15 Score=37.14 Aligned_cols=73 Identities=14% Similarity=0.188 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCC-HHHHHHHHHhh-----------CCceeccC-CCChhhHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN-PLFLQQHADII-----------GCPIILPR-ENESVLLGAAIL 558 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s-~~~~Qi~Advl-----------g~pV~~~~-~~ea~alGAA~l 558 (634)
.+++-.+..+...+..+... ..++.|++.||.+++ +.+.+.+-+.+ ..+|.... ..++.++|||.+
T Consensus 231 ~~~~~~~~~La~~i~~l~~~-l~p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l 309 (321)
T 3vgl_A 231 DSFRELARWAGAGLADLASL-FDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADL 309 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHH
Confidence 45555555555544444332 346789999988765 55443332222 12455544 456889999999
Q ss_pred HHhhcCC
Q 006707 559 GAVAAKR 565 (634)
Q Consensus 559 A~~~~g~ 565 (634)
+..++..
T Consensus 310 ~~~~~~~ 316 (321)
T 3vgl_A 310 ARQGLEH 316 (321)
T ss_dssp HHTC---
T ss_pred HHhhhhh
Confidence 9887653
No 128
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=60.18 E-value=42 Score=30.64 Aligned_cols=55 Identities=22% Similarity=0.199 Sum_probs=35.2
Q ss_pred EEEEEecCCcccEEEEEcCCCc------EEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHc
Q 006707 56 VFLGVDVGTGSARAGLFDESGK------LLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLA 117 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~------vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~ 117 (634)
.+||||-|++.+=-.++|.+|+ .+.......+ ...+..+=+..+.+.+.+++++.
T Consensus 2 rILGIDPGl~~tG~gvi~~~g~~~~~~~~v~~G~I~t~-------~~~~~~~RL~~I~~~l~~~i~~~ 62 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTS-------PQEPAKERVGRIHARVLEVLHRF 62 (166)
T ss_dssp EEEEEECCSSEEEEEEEEECSSSSSCEEEEEEEEEECC-------TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccccCceEEEEEEecCCccceEEEEEeCeEECC-------CCCCHHHHHHHHHHHHHHHHHHh
Confidence 4899999999999999997764 2333333332 12334444455666677777764
No 129
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=59.22 E-value=10 Score=36.41 Aligned_cols=64 Identities=13% Similarity=0.067 Sum_probs=44.0
Q ss_pred cEEEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
..+|+||-.|..+-++|++ +++++ +...... .+-.+. +...+++++++.++...+|.+|+++.-
T Consensus 12 ~~iLaidTS~~~~sval~~-~~~~l-~~~~~~~--------r~Hse~----L~p~i~~~L~~a~~~~~dld~Iav~~G 75 (218)
T 2a6a_A 12 HMNVLALDTSQRIRIGLRK-GEDLF-EISYTGE--------KKHAEI----LPVVVKKLLDELDLKVKDLDVVGVGIG 75 (218)
T ss_dssp -CEEEEEECSSSEEEEEEE-TTEEE-EEEEESC--------GGGGGH----HHHHHHHHHHHHTCCGGGCSEEEEECC
T ss_pred ceEEEEEcCCcCeEEEEEE-CCEEE-EEEecch--------HHHHHH----HHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 3589999999999999998 56676 3222211 111222 345667777777888899999999864
No 130
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=59.15 E-value=15 Score=37.34 Aligned_cols=68 Identities=16% Similarity=0.133 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhC---------CceeccC-CCChhhHHHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG---------CPIILPR-ENESVLLGAAILGA 560 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg---------~pV~~~~-~~ea~alGAA~lA~ 560 (634)
.+++-.+..+...+..+... ..++.|++.||.++.+.+.+.+.+.+. .+|.... ..+++++|||.++.
T Consensus 248 ~~~~~~~~~La~~i~~l~~~-l~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~l 325 (327)
T 4db3_A 248 EHVERFMELLAICFGNIFTA-NDPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLNI 325 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHHh
Confidence 34444444444433333221 345788888888876655554443332 2344443 35688999998764
No 131
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=58.75 E-value=2.1 Score=41.48 Aligned_cols=22 Identities=41% Similarity=0.585 Sum_probs=10.8
Q ss_pred EEEecCCccc--------EEEEEcCCCcEE
Q 006707 58 LGVDVGTGSA--------RAGLFDESGKLL 79 (634)
Q Consensus 58 LGIDiGTtsi--------Kavl~d~~g~vl 79 (634)
=|+|+||.++ |+++||-||+++
T Consensus 9 ~~~~~~~~~~~~~~~~MIKaViFDlDGTLv 38 (250)
T 4gib_A 9 SGVDLGTENLYFQSNAMIEAFIFDLDGVIT 38 (250)
T ss_dssp ---------------CCCCEEEECTBTTTB
T ss_pred ccccCCCCCcccCccchhheeeecCCCccc
Confidence 4899999987 899999999875
No 132
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=55.70 E-value=4 Score=42.44 Aligned_cols=21 Identities=24% Similarity=0.559 Sum_probs=17.7
Q ss_pred EEEEEecCCcccEEEEEcCCCc
Q 006707 56 VFLGVDVGTGSARAGLFDESGK 77 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~ 77 (634)
.++|||+|||++++++++ +|+
T Consensus 3 ~~vGIDlGTt~s~va~~~-~g~ 23 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMD-GTT 23 (383)
T ss_dssp CCCEEECCSSEEEEEEEE-TTE
T ss_pred cEEEEEcCCCCEEEEEEE-CCe
Confidence 478999999999999986 453
No 133
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=55.49 E-value=23 Score=35.94 Aligned_cols=50 Identities=18% Similarity=0.191 Sum_probs=30.9
Q ss_pred CccE-EEEecCCCCC-HH------HHHHHHH------h-hCCceeccCCCChhhHHHHHHHHhhc
Q 006707 514 KIDT-LLACGGLAKN-PL------FLQQHAD------I-IGCPIILPRENESVLLGAAILGAVAA 563 (634)
Q Consensus 514 ~~~~-I~~~GG~a~s-~~------~~Qi~Ad------v-lg~pV~~~~~~ea~alGAA~lA~~~~ 563 (634)
.++. |++.||.+.. .. +.+.+.+ . -..||......++.++|||.++...+
T Consensus 264 ~P~~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~a~l~GAa~l~~~~~ 328 (332)
T 1sz2_A 264 GTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTL 328 (332)
T ss_dssp TCTTEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEECCchhHHHHHHHHHHhh
Confidence 4555 8888988753 22 2222221 1 24567665566789999999886543
No 134
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=55.03 E-value=9 Score=45.28 Aligned_cols=64 Identities=9% Similarity=0.143 Sum_probs=40.4
Q ss_pred cEEEEEecCC-----cccEEEEEcCCCcEEEEEEe-eeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEE
Q 006707 55 SVFLGVDVGT-----GSARAGLFDESGKLLGSASS-PIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVG 128 (634)
Q Consensus 55 ~~~LGIDiGT-----tsiKavl~d~~g~vl~~~~~-~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIg 128 (634)
+.+||||-|- +++|++++|++|+++..... +++. + ..+.+. ....|.+++.+.+ -++.+||
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~~G~~l~~~~i~~~~~-~-----~~~~~~----~~~~l~~li~~~~---~~~IaIG 585 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKIVDNPF-D-----KTNPEK----FEDTLDNIIQSCQ---PNAIGIN 585 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECTTSCEEEEEEECSCTT-C-----SSCCHH----HHHHHHHHHHHHC---CSEEEEC
T ss_pred CeEEEecCCCCCCCCCCeEEEEECCCCCEEEEEEEcCCCC-C-----hhhHHH----HHHHHHHHHHHcC---CcEEEEC
Confidence 4689999984 48999999999999987765 3332 1 111111 1255667777643 3455555
Q ss_pred ecC
Q 006707 129 FAA 131 (634)
Q Consensus 129 is~ 131 (634)
-.+
T Consensus 586 n~s 588 (1030)
T 3psf_A 586 GPN 588 (1030)
T ss_dssp CSS
T ss_pred CCC
Confidence 433
No 135
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=53.86 E-value=28 Score=36.13 Aligned_cols=71 Identities=15% Similarity=0.234 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCccEEEEecCCCCCHH-HHHHHHHhhCC--ceec--cCCC-ChhhHHHHHHHHh
Q 006707 491 LATVQGIAYGTRHIVEHCNAH-GHKIDTLLACGGLAKNPL-FLQQHADIIGC--PIIL--PREN-ESVLLGAAILGAV 561 (634)
Q Consensus 491 rAvlEgia~~~r~~~~~l~~~-g~~~~~I~~~GG~a~s~~-~~Qi~Advlg~--pV~~--~~~~-ea~alGAA~lA~~ 561 (634)
+.+++-.+..+...+..+... +..++.|++.||.+++.. +.+.+.+.+.. |+.+ .... ++.++|||.++..
T Consensus 271 ~~~l~~~~~~la~~i~~l~~~l~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 271 KRVYRAMAYQIAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHcC
Confidence 356666666666665555432 236789999999886543 55544444432 4443 2222 3789999987643
No 136
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=50.93 E-value=9.2 Score=38.69 Aligned_cols=23 Identities=13% Similarity=0.271 Sum_probs=19.8
Q ss_pred EEEEecCCcccEEEEEcCCCcEE
Q 006707 57 FLGVDVGTGSARAGLFDESGKLL 79 (634)
Q Consensus 57 ~LGIDiGTtsiKavl~d~~g~vl 79 (634)
.+|||+||+++|++..+.+|++.
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~ 24 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIK 24 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEE
T ss_pred eEEEecCCccceEEEecCCCEEE
Confidence 68999999999999878888753
No 137
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=50.66 E-value=47 Score=35.53 Aligned_cols=52 Identities=17% Similarity=0.252 Sum_probs=35.9
Q ss_pred CCCccEEEEecCCCCCHHHHHHHH----Hhh--------CCceeccCCCChhhHHHHHHHHhhc
Q 006707 512 GHKIDTLLACGGLAKNPLFLQQHA----DII--------GCPIILPRENESVLLGAAILGAVAA 563 (634)
Q Consensus 512 g~~~~~I~~~GG~a~s~~~~Qi~A----dvl--------g~pV~~~~~~ea~alGAA~lA~~~~ 563 (634)
+.+...|.+.||..+.+.+.+.+. +++ +.+|......+++.+|||++|+.+.
T Consensus 381 ~~~~~~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GAAl~aa~~~ 444 (457)
T 2yhx_A 381 GYSSGHIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXSIAS 444 (457)
T ss_dssp TCSSEEEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCTTTHHHHHHHHHHH
T ss_pred CCCcEEEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCchhhhHHHHHHHHh
Confidence 333356666777733466665544 566 3467777788999999999999874
No 138
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=50.11 E-value=22 Score=38.88 Aligned_cols=68 Identities=18% Similarity=0.172 Sum_probs=40.7
Q ss_pred cEEEEEecCCcccEEEEEc--CCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEE
Q 006707 55 SVFLGVDVGTGSARAGLFD--ESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGV 127 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d--~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aI 127 (634)
+++.|||+|.+++.+++-+ .+|++-..++--.+..--.| ..++.. .+..+|++++++.+.+.+++.-|
T Consensus 2 ~~i~gvdign~tte~~la~~~~~~~~~f~~s~~~~ttg~kg-t~~n~~----g~~~~l~~~~~~~~~~~~~~~li 71 (610)
T 2d0o_A 2 RYIAGIDIGNSSTEVALATLDEAGALTITHSALAETTGIKG-TLRNVF----GIQEALALVARGAGIAVSDISLI 71 (610)
T ss_dssp EEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEECCSSTT-STTHHH----HHHHHHHHHHHHHTCCGGGEEEE
T ss_pred cEEEEEecCCcchheeeeeecCCCceEEeeccccccCCccC-cHHHHH----HHHHHHHHHHHHcCCChhhceee
Confidence 6899999998888887755 34654443333333222223 233444 44456677777777777666654
No 139
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=49.60 E-value=39 Score=34.81 Aligned_cols=19 Identities=21% Similarity=0.450 Sum_probs=17.7
Q ss_pred cEEEEEecCCcccEEEEEc
Q 006707 55 SVFLGVDVGTGSARAGLFD 73 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d 73 (634)
.+++.||+||+++|..|++
T Consensus 3 ~~~avID~GSns~Rl~I~~ 21 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYS 21 (353)
T ss_dssp EEEEEEEECSSCEEEEEEE
T ss_pred CEEEEEEcCCCCeEEEEEE
Confidence 4789999999999999998
No 140
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=49.59 E-value=40 Score=34.85 Aligned_cols=69 Identities=13% Similarity=0.076 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCC-HHHHHHHHHhh--------CCceeccC-CCChhhHHHHHHHHh
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN-PLFLQQHADII--------GCPIILPR-ENESVLLGAAILGAV 561 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s-~~~~Qi~Advl--------g~pV~~~~-~~ea~alGAA~lA~~ 561 (634)
.+++-.+..+-..+..+... ..++.|++.||.++. +.+.+.+...+ ..+|.... ..++.++|||.+|..
T Consensus 293 ~~l~~~~~~La~~i~~l~~~-ldP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~~ 371 (380)
T 2hoe_A 293 EYFDDIARYFSIGLLNLIHL-FGISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHALE 371 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 44444444444444333221 245788888888764 55544333322 24555544 446789999998764
No 141
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=49.17 E-value=68 Score=28.93 Aligned_cols=54 Identities=22% Similarity=0.324 Sum_probs=33.6
Q ss_pred EEEEEecCCcccEEEEEcCCCcE---EEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHc
Q 006707 56 VFLGVDVGTGSARAGLFDESGKL---LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLA 117 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~v---l~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~ 117 (634)
.+||||-|++.+=-.+++.+|+. +.....+++ . .+..+=+..+.+.+.+++++.
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~~~~~v~~G~i~t~-----~---~~~~~Rl~~i~~~l~~~i~~~ 58 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTK-----V---DDLPSRLKLIYAGVTEIITQF 58 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECC-----C---SCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCCCeeEEEEEecCCeEEEEEeeEEECC-----C---CCHHHHHHHHHHHHHHHHHHc
Confidence 38999999999999999977753 222233322 1 132333355556667777765
No 142
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=48.79 E-value=7.8 Score=43.23 Aligned_cols=18 Identities=28% Similarity=0.663 Sum_probs=16.4
Q ss_pred EEEEEecCCcccEEEEEc
Q 006707 56 VFLGVDVGTGSARAGLFD 73 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d 73 (634)
.++|||+|||+.++++++
T Consensus 3 ~viGIDlGTT~S~Va~~~ 20 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp CEEEEECCSSEEEEEEEE
T ss_pred cEEEEEcCCCcEEEEEEE
Confidence 589999999999999885
No 143
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=48.52 E-value=30 Score=41.62 Aligned_cols=64 Identities=9% Similarity=0.138 Sum_probs=40.6
Q ss_pred cEEEEEecCC-----cccEEEEEcCCCcEEEEEEe-eeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEE
Q 006707 55 SVFLGVDVGT-----GSARAGLFDESGKLLGSASS-PIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVG 128 (634)
Q Consensus 55 ~~~LGIDiGT-----tsiKavl~d~~g~vl~~~~~-~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIg 128 (634)
+.+||||-|. +++|++++|++|+++..... +++. +. .+.+ ...+.|.+++.+.+ -++.+||
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~~G~vl~~~~i~~~~~-~~-----~~~~----~a~~~l~~li~~~~---~~vIaIG 582 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKIVDNPF-DK-----TNPE----KFEDTLDNIIQSCQ---PNAIGIN 582 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECTTSCEEEEEEECSCTT-CS-----SCSH----HHHHHHHHHHHHHC---CSEEEEC
T ss_pred CeEEEecCCCCCCCCCceEEEEECCCCCEEEEEEEcCCCC-Ch-----hhHH----HHHHHHHHHHHHcC---CcEEEEC
Confidence 4689999985 48999999999999997765 3332 11 1111 11245667777643 3455665
Q ss_pred ecC
Q 006707 129 FAA 131 (634)
Q Consensus 129 is~ 131 (634)
-.+
T Consensus 583 n~s 585 (1219)
T 3psi_A 583 GPN 585 (1219)
T ss_dssp CSS
T ss_pred CCC
Confidence 443
No 144
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=47.26 E-value=65 Score=32.18 Aligned_cols=66 Identities=17% Similarity=0.220 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCH-----HHHHHHHHhhC-------CceeccC-CCChhhHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNP-----LFLQQHADIIG-------CPIILPR-ENESVLLGAAIL 558 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~-----~~~Qi~Advlg-------~pV~~~~-~~ea~alGAA~l 558 (634)
.+++-++..+..++.. ..++.|++.||.++.. .+.+.+...+. .+|.... ..++.++|||.+
T Consensus 222 ~~~~~~a~~la~l~~~-----~dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~l 296 (310)
T 3htv_A 222 SLLENAARAIATSINL-----FDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAIL 296 (310)
T ss_dssp HHHHHHHHHHHHHHHH-----HCCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-----hCCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHH
Confidence 5555555544433332 3568888889887652 23333333332 2333333 457899999999
Q ss_pred HHhh
Q 006707 559 GAVA 562 (634)
Q Consensus 559 A~~~ 562 (634)
|...
T Consensus 297 a~~~ 300 (310)
T 3htv_A 297 AHQR 300 (310)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8654
No 145
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=46.63 E-value=7.8 Score=40.45 Aligned_cols=21 Identities=38% Similarity=0.729 Sum_probs=17.9
Q ss_pred EEEEEecCCcccEEEEEcCCCc
Q 006707 56 VFLGVDVGTGSARAGLFDESGK 77 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~ 77 (634)
.++|||+|||++++++++ +|+
T Consensus 24 ~viGID~GTt~s~va~~~-~g~ 44 (404)
T 3i33_A 24 PAIGIDLGTTYSCVGVFQ-HGK 44 (404)
T ss_dssp CCEEEEECSSEEEEEEEE-TTE
T ss_pred CEEEEEcCCccEEEEEEE-CCe
Confidence 589999999999999887 443
No 146
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=46.63 E-value=36 Score=36.69 Aligned_cols=82 Identities=21% Similarity=0.300 Sum_probs=49.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH-----HHHhCCCCccEEEEecCCC-CCHHHHHHHH----Hhh--------CCce
Q 006707 481 SSEKQLALLYLATVQGIAYGTRHIVE-----HCNAHGHKIDTLLACGGLA-KNPLFLQQHA----DII--------GCPI 542 (634)
Q Consensus 481 ~~~~~~~~~~rAvlEgia~~~r~~~~-----~l~~~g~~~~~I~~~GG~a-~s~~~~Qi~A----dvl--------g~pV 542 (634)
.+..+. ..+|-+.+.+.-...+... .+...+.+.-.|-+.|+.- +.|.+.+.+. +++ +.+|
T Consensus 372 ~t~~d~-~~vr~i~~~V~~RAA~L~Aa~iaail~~~~~~~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v 450 (485)
T 3o8m_A 372 TTVVER-KLIRKLAELVGTRAARLTVCGVSAICDKRGYKTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPI 450 (485)
T ss_dssp CCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSE
T ss_pred CCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecChhccCccHHHHHHHHHHHHhccccccCCCceE
Confidence 444553 3566777766654433322 1233344444455567764 4566655444 444 3568
Q ss_pred eccCCCChhhHHHHHHHHhhc
Q 006707 543 ILPRENESVLLGAAILGAVAA 563 (634)
Q Consensus 543 ~~~~~~ea~alGAA~lA~~~~ 563 (634)
......+++.+|||++|+++.
T Consensus 451 ~l~~a~DGSg~GAAliAa~a~ 471 (485)
T 3o8m_A 451 QLVAAEDGSGVGAAIIACLTQ 471 (485)
T ss_dssp EEEECCCTTTHHHHHHHHHHH
T ss_pred EEEEcCCChHHHHHHHHHHHH
Confidence 777788999999999999875
No 147
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=46.39 E-value=20 Score=31.83 Aligned_cols=37 Identities=8% Similarity=0.223 Sum_probs=33.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 96 EQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 96 eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
+-+++++++++.+++.+++++.++++++|.+|-||.+
T Consensus 43 ~Nt~e~I~~At~ELl~eii~~N~l~~eDIvSv~FTvT 79 (148)
T 1xho_A 43 DNTADEIVAETQKLLKEMAEKNGLEEDDIISIIFTVT 79 (148)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 4578999999999999999999999999999999865
No 148
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=46.24 E-value=22 Score=35.24 Aligned_cols=70 Identities=11% Similarity=-0.135 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCC--HHHHHHHHHhhCCceeccCCCChhhHHHHHHHHhhcCC
Q 006707 491 LATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN--PLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKR 565 (634)
Q Consensus 491 rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s--~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~~g~ 565 (634)
+.+++-.+..+-..+ .+. ....++.|++.||.+++ +.+.+.+... ..++..+ .++...||+.+|....++
T Consensus 213 ~~i~~~~~~~La~~i-~~~-~~~~p~~vvlgGGv~~~~~~~l~~~l~~~-~~~i~~~--~~a~~~GA~~la~~~~~~ 284 (291)
T 1zbs_A 213 YSLVQNSFDDFLVRN-VLR-YNRPDLPLHFIGSVAFHYREVLSSVIKKR-GLTLGSV--LQSPMEGLIQYHHNNHVL 284 (291)
T ss_dssp HHHHHHHHHHHHHHH-TGG-GCCTTSCEEEESHHHHHTHHHHHHHHHHT-TCCEEEE--ESCSHHHHHHHHHHCCC-
T ss_pred HHHHHHHHHHHHHHH-hcc-cCCCCceEEEECchHHhhHHHHHHHHHHc-CCeeccc--CcCHHHHHHHHHHhhhhh
Confidence 467776666666665 332 22267889999998876 3344443332 2344443 378899999999765554
No 149
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=44.82 E-value=42 Score=33.51 Aligned_cols=53 Identities=17% Similarity=0.253 Sum_probs=33.5
Q ss_pred CCHHHHHHcCCCCCCcEEEccchhhhhhhccc--cccCcccchhchhhhhhccceEEEEecccceeeeeeCc
Q 006707 299 LTPAAAKELGLVPGTPVGTSLIDAHAGGVGVM--ESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRN 368 (634)
Q Consensus 299 i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~--g~~~~g~~~~~~~~~g~~~g~~~is~GTs~~~~~~~~~ 368 (634)
+.+.+.+++|+ || .-..|..|+++|-. |..+. ..+.+++++||.-.-..+.+.
T Consensus 89 l~~~l~~~~~~----pV-~v~NDanaaalaE~~~G~~~~------------~~~~~~l~~GtGiG~gii~~G 143 (302)
T 3epq_A 89 FLQTVXNEMXI----PV-GFSTDVNAAALGEFLFGEAXG------------LDSCLYITIGTGIGAGAIVEG 143 (302)
T ss_dssp HHHHHHHHHCS----CE-EEEEHHHHHHHHHHHHSTTTT------------CSCEEEEEESSSEEEEEEETT
T ss_pred hHHHHHHHhCC----CE-EEechhHHHHHHHHHhCCCCC------------CCcEEEEEECCceEEEEEECC
Confidence 56677778865 54 45689988887731 11110 135689999997665555554
No 150
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=43.49 E-value=45 Score=33.18 Aligned_cols=70 Identities=19% Similarity=0.131 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCC-CC-HHHHHHHHHhhC--------CceeccC-CCChhhHHHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLA-KN-PLFLQQHADIIG--------CPIILPR-ENESVLLGAAILGA 560 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a-~s-~~~~Qi~Advlg--------~pV~~~~-~~ea~alGAA~lA~ 560 (634)
.+++-.+..+...+..+... ..++.|++.||.+ +. +.+.+.+.+.+. .+|.... ..+++++|||.+|.
T Consensus 216 ~~~~~~~~~l~~~i~~l~~~-~~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 216 RLVLQAARYVGIGLASLVKA-FDPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HCCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 45555555554444444322 3467888888877 54 555554443332 2244444 35688999999886
Q ss_pred hh
Q 006707 561 VA 562 (634)
Q Consensus 561 ~~ 562 (634)
..
T Consensus 295 ~~ 296 (302)
T 3vov_A 295 LE 296 (302)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 151
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=42.55 E-value=25 Score=30.60 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=33.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCC
Q 006707 96 EQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (634)
Q Consensus 96 eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~~ 132 (634)
+-+++++++++.+++.+++++.++++++|.+|-||.+
T Consensus 14 ~Nt~e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT~T 50 (127)
T 1dbf_A 14 RDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSAT 50 (127)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 4578999999999999999999999999999999865
No 152
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=41.85 E-value=23 Score=36.49 Aligned_cols=71 Identities=15% Similarity=0.140 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHH--HHHHHHHhhCCceeccCCCChhhHHHHHHHHhh
Q 006707 489 LYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPL--FLQQHADIIGCPIILPRENESVLLGAAILGAVA 562 (634)
Q Consensus 489 ~~rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~--~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~~ 562 (634)
+++..++-.+-.+...+...-.....++.|+++||+|.-.. +.+.+.+.+ |.. .+...+.|+|...+|..-
T Consensus 265 ~i~~a~~~~~~~I~~~i~~~l~~~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~--~~~-~~p~~anA~G~~~~~~~~ 337 (355)
T 3js6_A 265 EFYKEQDSLIEEVMSNFEITVGNINSIDRIIVTGGGANIHFDSLSHYYSDVF--EKA-DDSQFSNVRGYEKLGELL 337 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTTSCSEEEEESTTHHHHHHHHHHHSSSCE--ECC-SSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhccEEEEECcchhcchhhHHHHHHHHC--CCC-CCcHHHHHHHHHHHHHHH
Confidence 34444544444433333222111224589999999986222 335666666 444 445568899999876543
No 153
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=41.25 E-value=22 Score=38.97 Aligned_cols=64 Identities=13% Similarity=0.169 Sum_probs=41.1
Q ss_pred cEEEEEecCCcccEEEEEc-CCC--cEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeE
Q 006707 55 SVFLGVDVGTGSARAGLFD-ESG--KLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVK 125 (634)
Q Consensus 55 ~~~LGIDiGTtsiKavl~d-~~g--~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~ 125 (634)
+++.|||||||++.+++-+ .+| +.+.+...+..=. .| ..+|.....+ +|++++++.+....++.
T Consensus 2 ~~i~GiDIGnsttev~l~~~~~g~i~~l~~g~~~ttGi--KG-t~~Ni~g~~~----si~~a~~~a~~~~~d~~ 68 (607)
T 1nbw_A 2 PLIAGIDIGNATTEVALASDYPQARAFVASGIVATTGM--KG-TRDNIAGTLA----ALEQALAKTPWSMSDVS 68 (607)
T ss_dssp CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEECCSS--TT-SGGGHHHHHH----HHHHHHTTSSCCGGGEE
T ss_pred cEEEEEEecCceEEEEEEEEcCCeEEEEEeecccCCcc--ce-eeeCHHHHHH----HHHHHHHHhCCcccCce
Confidence 6899999999999999876 335 5577776665322 22 3456665554 45666666554434443
No 154
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=41.14 E-value=13 Score=40.42 Aligned_cols=19 Identities=21% Similarity=0.569 Sum_probs=16.8
Q ss_pred EEEEEecCCcccEEEEEcC
Q 006707 56 VFLGVDVGTGSARAGLFDE 74 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~ 74 (634)
.++|||+|||++++++++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~ 21 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEG 21 (509)
T ss_dssp CEEEEEECSSEEEEEEEET
T ss_pred CEEEEEcCCceEEEEEEEC
Confidence 4899999999999999863
No 155
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=40.50 E-value=30 Score=34.81 Aligned_cols=55 Identities=18% Similarity=-0.035 Sum_probs=32.0
Q ss_pred CCHHHHHHcCCCCCCcEEEccchhhhhhhccccccCcccchhchhhhhhccceEEEEecccceeeeeeCc
Q 006707 299 LTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRN 368 (634)
Q Consensus 299 i~~~~a~~~GL~~g~pV~~g~gD~~aa~~g~~g~~~~g~~~~~~~~~g~~~g~~~is~GTs~~~~~~~~~ 368 (634)
+.+.+.+++++ || .-..|..++++|-.-.... + ...+-+++++||.-....+.+.
T Consensus 112 l~~~l~~~~~~----pv-~v~NDa~aaalgE~~~g~~------~----~~~~~v~l~~GtGiG~giv~~G 166 (327)
T 2ap1_A 112 LRADLSARLDR----DV-RLDNDANCFALSEAWDDEF------T----QYPLVMGLILGTGVGGGLVLNG 166 (327)
T ss_dssp HHHHHHHHHTS----CE-EEEEHHHHHHHHHHTSTTG------G----GCSEEEEEEESSSEEEEEEETT
T ss_pred hHHHHHHHHCC----CE-EEecHHHHHHHHHHHhCcC------C----CCCcEEEEEECCcEEEEEEECC
Confidence 55666677764 54 4578999988874111100 0 0124578899998655555553
No 156
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=40.46 E-value=31 Score=29.76 Aligned_cols=37 Identities=22% Similarity=0.238 Sum_probs=33.2
Q ss_pred ccCHHHHHHHHHHHHHHHHHHcCCCC-CCeEEEEecCC
Q 006707 96 EQSSTDIWHAICAAVDSACSLANVDG-EEVKGVGFAAT 132 (634)
Q Consensus 96 eqdp~~~~~a~~~~l~~~l~~~~~~~-~~I~aIgis~~ 132 (634)
+-+++++++++.+++.+++++.++++ ++|.+|-||.+
T Consensus 13 ~n~~e~I~~at~eLl~~i~~~N~l~~~~divSv~FT~T 50 (122)
T 1ufy_A 13 EDTPEAIHQATRELLLKMLEANGIQSYEELAAVIFTVT 50 (122)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHTCCCGGGEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCChHhEEEEEEEeC
Confidence 45789999999999999999999999 99999999865
No 157
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=40.33 E-value=25 Score=37.59 Aligned_cols=60 Identities=8% Similarity=0.033 Sum_probs=37.0
Q ss_pred CcEEEEEecCCcccEEEEEcC-CC-----cEEEEEEeeeccccCCCc--cccCHHHHHHHHHHHHHHHHH
Q 006707 54 RSVFLGVDVGTGSARAGLFDE-SG-----KLLGSASSPIQIWKEGDC--IEQSSTDIWHAICAAVDSACS 115 (634)
Q Consensus 54 ~~~~LGIDiGTtsiKavl~d~-~g-----~vl~~~~~~~~~~~~~g~--~eqdp~~~~~a~~~~l~~~l~ 115 (634)
.+|.+.||+|++++|..||.- +. .++.+. ..-....||- +..+|+...+.+..+++.+.+
T Consensus 33 ~~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~~--~~~k~~gpGlSs~~~~p~~~~~~l~~Ll~~a~~ 100 (452)
T 3zx3_A 33 VKYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQL--EECQVKGPGISKYAQKTDEIAAYLAECMKMSTE 100 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEEEECCCTTCCCCCEEE--EEEECSSSCGGGGTTCGGGHHHHHHHHHHHHHH
T ss_pred ceEEEEEEcCCCCcEEEEEEEeCCcCCCcccccee--eeecccCCChhccCCCHHHHHHHHHHHHHHHHH
Confidence 368899999999999999973 21 122211 1100112552 234888888887777766554
No 158
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=39.45 E-value=32 Score=35.82 Aligned_cols=46 Identities=13% Similarity=0.165 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCccEEEEecCCC-CCHHHHHHHHHh
Q 006707 491 LATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADI 537 (634)
Q Consensus 491 rAvlEgia~~~r~~~~~l~~-~g~~~~~I~~~GG~a-~s~~~~Qi~Adv 537 (634)
+-++|..+|+++..+-.+-. .+ .++-|+++||.. +++.+++.+.+-
T Consensus 290 ~lA~d~f~yri~k~IGa~aa~L~-gvDaIVFTgGIgEns~~iR~~i~~~ 337 (384)
T 3khy_A 290 KLAIEIFSHRVAKFVASYMIYFN-KLDALVFTGGIGENAANIRKNIISK 337 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCS-SCCEEEEEHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECCccccCcHHHHHHHHhh
Confidence 36789999999888877654 45 789999999987 567677665544
No 159
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=38.14 E-value=61 Score=33.61 Aligned_cols=68 Identities=16% Similarity=0.232 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCC-HHHHHHHHHhh----------CCceeccC-CCChhhHHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN-PLFLQQHADII----------GCPIILPR-ENESVLLGAAILG 559 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s-~~~~Qi~Advl----------g~pV~~~~-~~ea~alGAA~lA 559 (634)
.+++-.+..+-..+..+... ..++.|++.||.++. +.+.+.+.+.+ ..+|.... ..++.++|||+++
T Consensus 313 ~~l~~~~~~L~~~i~~l~~~-ldP~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~ 391 (406)
T 1z6r_A 313 DIITGVGAHVGRILAIMVNL-FNPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVK 391 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHH
Confidence 45555444444444433321 246788888888763 55544333221 34566654 4568899998764
Q ss_pred H
Q 006707 560 A 560 (634)
Q Consensus 560 ~ 560 (634)
.
T Consensus 392 ~ 392 (406)
T 1z6r_A 392 D 392 (406)
T ss_dssp H
T ss_pred H
Confidence 3
No 160
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=37.70 E-value=48 Score=34.03 Aligned_cols=69 Identities=10% Similarity=0.076 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecC-CCCCHHHHH------HHHHh-h-----------CCceeccC-CCChh
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGG-LAKNPLFLQ------QHADI-I-----------GCPIILPR-ENESV 551 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG-~a~s~~~~Q------i~Adv-l-----------g~pV~~~~-~~ea~ 551 (634)
.+++-.+..+-..+..+... ..++.|++.|| .++++.+.+ .+... + ..||.+.. ..+++
T Consensus 283 ~~l~~~~~~L~~~i~~l~~~-l~p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~ 361 (373)
T 2q2r_A 283 KAMKKYHEYLMRVGSEASMA-LLPLTIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLN 361 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HCCCEEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchh
Confidence 44444444444444333221 24566777777 566665554 22222 2 24555543 45789
Q ss_pred hHHHHHHHHh
Q 006707 552 LLGAAILGAV 561 (634)
Q Consensus 552 alGAA~lA~~ 561 (634)
++|||.+|..
T Consensus 362 l~GAa~l~~~ 371 (373)
T 2q2r_A 362 LMGCYRCGLD 371 (373)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998754
No 161
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=37.29 E-value=23 Score=35.31 Aligned_cols=63 Identities=14% Similarity=0.153 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCC--CHHHHHHHHHhhCCceeccCCCChhhHHHHHHHHh
Q 006707 491 LATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAK--NPLFLQQHADIIGCPIILPRENESVLLGAAILGAV 561 (634)
Q Consensus 491 rAvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~--s~~~~Qi~Advlg~pV~~~~~~ea~alGAA~lA~~ 561 (634)
+.+++-.+..+-..+..+... .++.|++.||.++ .+.+.+.+... +.. ...++++|||++|..
T Consensus 229 ~~i~~~~~~~L~~~l~~l~~~--~p~~VvlgGgv~~~~~~~l~~~l~~~----i~~--~~~~~~~GAa~la~~ 293 (305)
T 1zc6_A 229 DALLRQAGEDAWAIARALDPQ--DELPVALCGGLGQALRDWLPPGFRQR----LVA--PQGDSAQGALLLLQR 293 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT--CCSCEEEESHHHHHTGGGSCHHHHHH----CCC--CSSCHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHhcC--CCCeEEEECCchHhHHHHHHHHHHhh----ccC--CCCCHHHHHHHHHhh
Confidence 366666666666665555433 6778888888764 23333333332 222 356789999998753
No 162
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=36.92 E-value=14 Score=41.69 Aligned_cols=18 Identities=17% Similarity=0.372 Sum_probs=16.1
Q ss_pred EEEEecCCcccEEEEEcC
Q 006707 57 FLGVDVGTGSARAGLFDE 74 (634)
Q Consensus 57 ~LGIDiGTtsiKavl~d~ 74 (634)
++|||+|||+.++++++.
T Consensus 4 ~iGIDlGTtns~va~~~~ 21 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVARN 21 (675)
T ss_dssp CEEEECCSSEEEEEEEET
T ss_pred EEEEEcCCCcEEEEEEEC
Confidence 799999999999998764
No 163
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=36.73 E-value=70 Score=33.51 Aligned_cols=69 Identities=10% Similarity=0.102 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCC-CHHHHHHHHHh-----h-----CCceeccC-CCChhhHHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAK-NPLFLQQHADI-----I-----GCPIILPR-ENESVLLGAAILG 559 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~-s~~~~Qi~Adv-----l-----g~pV~~~~-~~ea~alGAA~lA 559 (634)
.+++-.+..+-..+..+... ..++.|++.||.++ .+.+.+.+-.. + ..+|.... ..+ .++|||.+|
T Consensus 336 ~il~~~~~~L~~~i~~l~~~-ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~ 413 (429)
T 1z05_A 336 DVIQQLGRYLGAAIAIVINL-FNPEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALI 413 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHH
Confidence 44554554444444433321 34678888888876 34444333221 1 34566554 345 899999988
Q ss_pred Hhh
Q 006707 560 AVA 562 (634)
Q Consensus 560 ~~~ 562 (634)
...
T Consensus 414 ~~~ 416 (429)
T 1z05_A 414 KQA 416 (429)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 164
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=36.48 E-value=34 Score=36.14 Aligned_cols=49 Identities=16% Similarity=0.079 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CC-----CCccEEEEecCC-CCCHHHHHHHHHhhC
Q 006707 491 LATVQGIAYGTRHIVEHCNA-HG-----HKIDTLLACGGL-AKNPLFLQQHADIIG 539 (634)
Q Consensus 491 rAvlEgia~~~r~~~~~l~~-~g-----~~~~~I~~~GG~-a~s~~~~Qi~Advlg 539 (634)
+-++|..+|.++..+-.+-. .+ ..++-|+++||. -+++.+++.+.+-++
T Consensus 323 ~lA~d~f~yri~k~IGa~aa~L~~~~~~G~vDaIVFTGGIGEns~~iR~~i~~~l~ 378 (438)
T 4h0p_A 323 KLTYAVFLDRLLNFVAQYLFKLLSEVPIESIDGLVFSGGIGEKGAELRRDVLKKLA 378 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCGGGSCEEEEEHHHHHHCHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccccCCCCCEEEECCccccCcHHHHHHHHHhHh
Confidence 36788899998887766543 33 368999999997 488888877665543
No 165
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=35.27 E-value=15 Score=40.93 Aligned_cols=18 Identities=28% Similarity=0.663 Sum_probs=15.8
Q ss_pred EEEEEecCCcccEEEEEc
Q 006707 56 VFLGVDVGTGSARAGLFD 73 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d 73 (634)
.++|||+|||++.+++++
T Consensus 3 ~viGIDlGTt~s~va~~~ 20 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp -CEEEECCSSEEEEEEEE
T ss_pred CEEEEEcCCcCEEEEEEE
Confidence 478999999999999886
No 166
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=34.64 E-value=44 Score=27.60 Aligned_cols=21 Identities=19% Similarity=0.158 Sum_probs=19.0
Q ss_pred EEEEecCCcccEEEEEcCCCc
Q 006707 57 FLGVDVGTGSARAGLFDESGK 77 (634)
Q Consensus 57 ~LGIDiGTtsiKavl~d~~g~ 77 (634)
+||||+|+..+=.++-|..+.
T Consensus 3 iLglD~G~kriGvAvsd~~~~ 23 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEEGVP 23 (98)
T ss_dssp EEEEEESSSEEEEEEECSCCS
T ss_pred EEEEEeCCCEEEEEEEeCCCC
Confidence 799999999999999998764
No 167
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=34.41 E-value=16 Score=37.04 Aligned_cols=20 Identities=30% Similarity=0.390 Sum_probs=16.1
Q ss_pred EEEEEecCCcccEEEEEcCCC
Q 006707 56 VFLGVDVGTGSARAGLFDESG 76 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g 76 (634)
..+|||+||+++|+++. .++
T Consensus 4 ~~igIDlGT~~s~v~~~-~~~ 23 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLR-GKG 23 (344)
T ss_dssp CEEEEEECSSEEEEEET-TTE
T ss_pred ceEEEEcCcCcEEEEEC-CCC
Confidence 47899999999999864 344
No 168
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=30.95 E-value=45 Score=35.04 Aligned_cols=46 Identities=11% Similarity=0.211 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCCccEEEEecCCC-CCHHHHHHHHHhh
Q 006707 492 ATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADII 538 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~-~g~~~~~I~~~GG~a-~s~~~~Qi~Advl 538 (634)
-++|..+|+++..+-.+-. . ..++-|++|||.. +++.+++.+.+-+
T Consensus 300 lA~d~f~yri~k~IGa~~a~L-ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 300 LALEIFAYKVKKFIGEYSAVL-NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhh-CCCCEEEECccccccCHHHHHHHHhhh
Confidence 5888899999887776654 4 3589999999988 8888887776543
No 169
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=30.50 E-value=21 Score=36.52 Aligned_cols=22 Identities=36% Similarity=0.563 Sum_probs=17.5
Q ss_pred EEEEEecCCcccEEEEEcCCCcEE
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLL 79 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl 79 (634)
..+|||+||+++|+.. .+|.++
T Consensus 22 ~~igiDlG~~~tkv~~--~~g~~~ 43 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG--VDGKRI 43 (346)
T ss_dssp EEEEEEECSSEEEEEC--GGGCEE
T ss_pred EEEEEecCCcceeEEe--cCCCEE
Confidence 5799999999999874 456544
No 170
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=29.91 E-value=12 Score=37.26 Aligned_cols=63 Identities=13% Similarity=-0.098 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEEEecCCCCCHHHHHHHHHhhCC---ceeccCCCChhhHHHHHHHH
Q 006707 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGC---PIILPRENESVLLGAAILGA 560 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~---pV~~~~~~ea~alGAA~lA~ 560 (634)
.+++-.+..+-..+ .+. ...+++.|++.||.+++ +.+.+...+.. ++.. ..+++++|||++|.
T Consensus 212 ~i~~~~~~~La~~i-~~~-~~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~--~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 212 QLVMNSFIAFFRRN-VMQ-YDYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIGK--ILQSPMEGLIQYHS 277 (291)
T ss_dssp HHHHHHHHHHHTTT-GGG-SCTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEEE--ECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHH-hcc-cCCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEee--cCCCHHHHHHHHHH
Confidence 45555555544444 222 21267788888888877 44444444443 3443 34788999998764
No 171
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=28.15 E-value=44 Score=35.03 Aligned_cols=47 Identities=11% Similarity=0.240 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCCccEEEEecCCC-CCHHHHHHHHHhhC
Q 006707 492 ATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADIIG 539 (634)
Q Consensus 492 AvlEgia~~~r~~~~~l~~-~g~~~~~I~~~GG~a-~s~~~~Qi~Advlg 539 (634)
-++|..+|+++..+-.+-. .+ .++-|+++||.. +++.+++.+.+-++
T Consensus 300 lA~d~f~yri~k~IGa~~a~Lg-gvDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 300 LVLEIYDYRIAKYIGAYAAAMN-GVDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-CCSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCCEEEECcccccCCHHHHHHHHhhhh
Confidence 5888889998887766543 45 689999999988 78888877766543
No 172
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=28.15 E-value=85 Score=33.40 Aligned_cols=47 Identities=23% Similarity=0.252 Sum_probs=29.8
Q ss_pred EEEEecCCC-CCHHHHHHHHH----hh--CCceeccCCCChhhHHHHHHHHhhc
Q 006707 517 TLLACGGLA-KNPLFLQQHAD----II--GCPIILPRENESVLLGAAILGAVAA 563 (634)
Q Consensus 517 ~I~~~GG~a-~s~~~~Qi~Ad----vl--g~pV~~~~~~ea~alGAA~lA~~~~ 563 (634)
.|.+.||.. +.+.+.+.+.. .+ ..+|......+++.+|||++|+.+.
T Consensus 395 ~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~~dgs~iGAAllA~~~~ 448 (451)
T 1bdg_A 395 TVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLSEDGSGKGAAAIAASCT 448 (451)
T ss_dssp EEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEECTTHHHHHHHHHHTTC-
T ss_pred EEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEECCCccHHHHHHHHHHHh
Confidence 455556654 35555544443 33 4566665677899999999998764
No 173
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=27.63 E-value=1.1e+02 Score=31.15 Aligned_cols=32 Identities=22% Similarity=0.562 Sum_probs=22.1
Q ss_pred EEEEecCCcccEEEEEcCCCcEEEEEEeeeccc
Q 006707 57 FLGVDVGTGSARAGLFDESGKLLGSASSPIQIW 89 (634)
Q Consensus 57 ~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~ 89 (634)
+||+|||.-++|+++++.+|++ ...+.++|.+
T Consensus 2 iiG~DIGGAn~K~a~~~~~g~~-~~~~~~~PlW 33 (334)
T 3cet_A 2 ILGIDIGGANTKITELHENGEF-KVHHLYFPMW 33 (334)
T ss_dssp EEEEEEC--CEEEEEECSTTCC-EEEEC-----
T ss_pred eeEEEecccceeeeeecCCCce-EEEEEecCCc
Confidence 7899999999999999989988 6666666754
No 174
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=27.19 E-value=1.8e+02 Score=28.54 Aligned_cols=63 Identities=21% Similarity=0.273 Sum_probs=43.0
Q ss_pred EEEEecCCcccEEEEEcCCCcEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecC
Q 006707 57 FLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (634)
Q Consensus 57 ~LGIDiGTtsiKavl~d~~g~vl~~~~~~~~~~~~~g~~eqdp~~~~~a~~~~l~~~l~~~~~~~~~I~aIgis~ 131 (634)
+|.||+|.|++|..+|| +++++...+.+++ .....+++... ++++++..+++..+|.+|.+|+
T Consensus 2 lL~IDIGNT~ik~gl~~-~~~l~~~~r~~T~-------~~~t~de~~~~----l~~ll~~~~~~~~~i~~iiISS 64 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE-EGELRQHWRMETD-------RHKTEDEYGML----VKQLLEHEGLSFEDVKGIIVSS 64 (268)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEECC-------TTCCHHHHHHH----HHHHHHHTTCCGGGCCEEEEEE
T ss_pred EEEEEECcCcEEEEEEE-CCEEEEEEEecCC-------CcCCHHHHHHH----HHHHHHHcCCCcccCcEEEEEc
Confidence 68999999999999999 5567766665554 23445666544 4556666565556677776643
No 175
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=26.77 E-value=71 Score=30.95 Aligned_cols=46 Identities=28% Similarity=0.440 Sum_probs=29.7
Q ss_pred CccEEEEecCCCCC-HHHHHHHHHhhCCceeccC-CCChhhHHHHHHHHh
Q 006707 514 KIDTLLACGGLAKN-PLFLQQHADIIGCPIILPR-ENESVLLGAAILGAV 561 (634)
Q Consensus 514 ~~~~I~~~GG~a~s-~~~~Qi~Advlg~pV~~~~-~~ea~alGAA~lA~~ 561 (634)
.++.|++.||.++. +.+.+.+. ...+|.... ..++.++|||.++..
T Consensus 214 dP~~IvlgG~i~~~~~~~~~~~~--~~~~i~~s~l~~~a~~~GAa~l~~~ 261 (267)
T 1woq_A 214 SPELFIVGGGISKRADEYLPNLR--LRTPIVPAVLRNEAGIVGAAIEIAL 261 (267)
T ss_dssp CCSEEEEESGGGGGGGGTGGGCC--CSSCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeChhhcccHHHHHhhc--cCceEEECCcCCcHHHHHHHHHHHh
Confidence 46788888888764 44433322 235566654 356789999998754
No 176
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=26.57 E-value=29 Score=35.27 Aligned_cols=22 Identities=9% Similarity=-0.007 Sum_probs=18.0
Q ss_pred CCCCcEEEEEecCCcccEEEEE
Q 006707 51 ARSRSVFLGVDVGTGSARAGLF 72 (634)
Q Consensus 51 ~m~~~~~LGIDiGTtsiKavl~ 72 (634)
+|+.++++|||+|-.++|++.-
T Consensus 3 ~~~~~~iigiD~G~~~~K~~~~ 24 (329)
T 4apw_A 3 NITNEYVMTLDAGKYETKLIGK 24 (329)
T ss_dssp --CCEEEEEEEECSSEEEEEEH
T ss_pred CccCceEEEEecCCceEEEEec
Confidence 5777889999999999999973
No 177
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=26.50 E-value=21 Score=37.46 Aligned_cols=47 Identities=13% Similarity=0.181 Sum_probs=33.0
Q ss_pred ccEEEEecCCCCCHHHHHHHHHhhCCc----------------------eecc---CCCChhhHHHHHHHHh
Q 006707 515 IDTLLACGGLAKNPLFLQQHADIIGCP----------------------IILP---RENESVLLGAAILGAV 561 (634)
Q Consensus 515 ~~~I~~~GG~a~s~~~~Qi~Advlg~p----------------------V~~~---~~~ea~alGAA~lA~~ 561 (634)
.++|+++||.++-+.+.+.+.+-++.. |.+. +...++.+|++++|..
T Consensus 316 ~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 316 YKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 467999999999988887777654432 2222 2235788999998763
No 178
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=24.75 E-value=1.6e+02 Score=30.56 Aligned_cols=66 Identities=23% Similarity=0.367 Sum_probs=47.4
Q ss_pred CccEEEE--ecCCCCCHHHHHHHHHh-----hCCceeccCCCChhhHHHHHHHHhhcCCC--CCHHHHHHHhhhc
Q 006707 514 KIDTLLA--CGGLAKNPLFLQQHADI-----IGCPIILPRENESVLLGAAILGAVAAKRY--SSLIEAMKAMNAA 579 (634)
Q Consensus 514 ~~~~I~~--~GG~a~s~~~~Qi~Adv-----lg~pV~~~~~~ea~alGAA~lA~~~~g~~--~~~~e~~~~~~~~ 579 (634)
.++-|++ .||..+.+..-+-+.+. .++||.+.-...-.-.|-.++.-.++..| +++++|+++++..
T Consensus 310 ~v~~ilvni~ggi~~~~~vA~gii~a~~~~~~~~pivvrl~G~n~~~g~~~l~~~g~~~~~~~~~~~aa~~~v~~ 384 (388)
T 2nu8_B 310 KVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAA 384 (388)
T ss_dssp TCCEEEEEEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEEESTTHHHHHHHHHTTCSSEEECSSHHHHHHHHHHH
T ss_pred CCCEEEEEecCCcCCchHHHHHHHHHHHhcCCCCeEEEEeCCCCHHHHHHHHHHCCCceecCCCHHHHHHHHHHH
Confidence 3454544 68888877777766665 57898763333335688889887778888 9999999988654
No 179
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=23.44 E-value=84 Score=31.61 Aligned_cols=30 Identities=27% Similarity=0.327 Sum_probs=25.8
Q ss_pred EEEEEecCCcccEEEEEcCCCcEEEEEEeee
Q 006707 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPI 86 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~vl~~~~~~~ 86 (634)
-.+.||+|..|+-.++++ ++++....+.|+
T Consensus 132 ~~lviDIGGGStEl~~~~-~~~~~~~~Sl~l 161 (315)
T 3mdq_A 132 ISLAMDIGGGSVEFIIGN-KNEILWKQSFEI 161 (315)
T ss_dssp CEEEEEECSSCEEEEEEC-SSCEEEEEEESC
T ss_pred CEEEEEeCCCceEEEEEE-CCeEeeeEEEec
Confidence 478899999999999998 667888878777
No 180
>1eik_A RNA polymerase subunit RPB5; RPBH, OCSP, NESG, protein structure initiative, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.78.1.1
Probab=23.28 E-value=67 Score=25.35 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=24.1
Q ss_pred HHHHHHcCCCCcccccccccCcccccCCCcccCCCCHHHHHHcCCCCCC
Q 006707 265 DEFWEEIGLGDLIDGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGT 313 (634)
Q Consensus 265 ~~~L~~~gi~~~l~~~lp~l~~~~~~~g~~iG~~i~~~~a~~~GL~~g~ 313 (634)
+++|+..++.+ .+||+|. .++.+|+.+|+..|-
T Consensus 23 ~~lL~~y~i~~---~qLP~I~-------------~~DPvar~~G~k~Gd 55 (77)
T 1eik_A 23 KRVLKELDAHP---EQLPKIK-------------TTDPVAKAIGAKRGD 55 (77)
T ss_dssp HHHHHHTTCCT---TTSCCCB-------------TTSHHHHGGGCCTTC
T ss_pred HHHHHHcCCCH---HHCCeee-------------CcCHhhHHhCCCCCC
Confidence 46889999887 4668654 566777888887764
No 181
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=23.00 E-value=2e+02 Score=29.84 Aligned_cols=66 Identities=18% Similarity=0.235 Sum_probs=46.8
Q ss_pred ccEEE--EecCCCCCHHHHHHHHHhh-----CCceeccCCCChhhHHHHHHHHhhcCCC--CCHHHHHHHhhhcC
Q 006707 515 IDTLL--ACGGLAKNPLFLQQHADII-----GCPIILPRENESVLLGAAILGAVAAKRY--SSLIEAMKAMNAAG 580 (634)
Q Consensus 515 ~~~I~--~~GG~a~s~~~~Qi~Advl-----g~pV~~~~~~ea~alGAA~lA~~~~g~~--~~~~e~~~~~~~~~ 580 (634)
++-|+ +.||..+.+..-+-+.+.+ ++||.+.-.....-.|-.++...++..| +++++|+++.+...
T Consensus 318 v~~ilvni~ggi~~~d~vA~gii~a~~~~~~~~Pivvrl~G~n~~~g~~~L~~~gl~~~~~~~~~~Aa~~~v~~~ 392 (395)
T 2fp4_B 318 VEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASV 392 (395)
T ss_dssp CCEEEEEEEESSSCHHHHHHHHHHHHHHHTCCSCEEEEEEETTHHHHHHHHHHTCSCCEECSSHHHHHHHHHHTT
T ss_pred CCEEEEEecCCccCcHHHHHHHHHHHHhcCCCCeEEEEcCCCCHHHHHHHHHHCCCceEeCCCHHHHHHHHHHHh
Confidence 34444 4588888777777666554 6788763322334568899988888888 99999999887653
No 182
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=22.12 E-value=83 Score=32.89 Aligned_cols=47 Identities=9% Similarity=-0.038 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCccEEEEecCC-CCCHHHHHHHHHhh
Q 006707 491 LATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGL-AKNPLFLQQHADII 538 (634)
Q Consensus 491 rAvlEgia~~~r~~~~~l~~-~g~~~~~I~~~GG~-a~s~~~~Qi~Advl 538 (634)
+-++|..+|+++..+-.+-. .+. ++-|+++||. .+++.+++.+.+-+
T Consensus 303 ~lA~d~f~yri~k~IGa~aa~L~G-vDaIVFTgGIGEns~~vR~~i~~~l 351 (404)
T 4h0o_A 303 QLAFDVYIKQLAKTIGGLMVEIGG-LDLLVFTDQMGLEVWQVRKAICDKM 351 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC-CSEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CCEEEECCccccCcHHHHHHHHhhh
Confidence 35789999999887766643 454 8999999997 46688877665543
No 183
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=21.94 E-value=68 Score=34.39 Aligned_cols=84 Identities=19% Similarity=0.303 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH--------HHHHHHhCC-CCc--cEEEEecCCC-CCHHHHHHHHHhh-----CCcee
Q 006707 481 SSEKQLALLYLATVQGIAYGTRH--------IVEHCNAHG-HKI--DTLLACGGLA-KNPLFLQQHADII-----GCPII 543 (634)
Q Consensus 481 ~~~~~~~~~~rAvlEgia~~~r~--------~~~~l~~~g-~~~--~~I~~~GG~a-~s~~~~Qi~Advl-----g~pV~ 543 (634)
.+.++.. .+|-+.+.|.-.-.. ++..+++.. .+. -.|-+.|+.- +.|.+.+.+...+ +.+|.
T Consensus 364 ~~~~d~~-~vr~i~~~V~~RaA~L~Aa~iaail~k~~~~~~~~~~~~~VgvDGsv~~~yp~f~~~~~~~l~~l~~~~~v~ 442 (470)
T 3f9m_A 364 PSTTDCD-IVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPSCEIT 442 (470)
T ss_dssp CCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCTTEEEE
T ss_pred CCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeccHHHhCchHHHHHHHHHHHHcCCCeEE
Confidence 3444433 566777766553332 233333221 111 3455567654 4677776666553 46788
Q ss_pred ccCCCChhhHHHHHHHHhhcCC
Q 006707 544 LPRENESVLLGAAILGAVAAKR 565 (634)
Q Consensus 544 ~~~~~ea~alGAA~lA~~~~g~ 565 (634)
.....+++.+|||++|+.+...
T Consensus 443 l~~a~DGSg~GAAliAa~a~~~ 464 (470)
T 3f9m_A 443 FIESEEGSGRGAALVSAVACKK 464 (470)
T ss_dssp EEECSSHHHHHHHHHHHHHTC-
T ss_pred EEEcCCCcHHHHHHHHHHHHHH
Confidence 7778899999999999998653
No 184
>1dw0_A Cytochrome C; asparagine ligation, oxygen binding, disulfide bridge, oxygen storage/transport complex; HET: HEM; 1.82A {Rhodobacter sphaeroides} SCOP: a.3.1.1 PDB: 1dw1_A* 1dw2_A* 1dw3_A*
Probab=21.79 E-value=26 Score=29.83 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=26.1
Q ss_pred HHH-HHHHHHhchhhHHhhceeecchhHHHhhhh
Q 006707 193 PPK-LLWVKENLQESWSMVFRWMDLSDWLSYRAT 225 (634)
Q Consensus 193 ~~k-l~wl~~~~Pe~~~~~~~~~~~~dyl~~~LT 225 (634)
..| =.|+++|..+++.|..--..=.|||.|+++
T Consensus 78 ~akvekwf~rnc~~v~gr~cta~EK~d~l~~l~~ 111 (112)
T 1dw0_A 78 SARVEKWLGRNCNSVIGRDCTPGEKADLLAWLAA 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhhHHHcccCCHHHHHHHHHHHHh
Confidence 344 359999999999887666666899999886
No 185
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=21.59 E-value=75 Score=27.95 Aligned_cols=23 Identities=17% Similarity=0.173 Sum_probs=20.2
Q ss_pred EEEEEecCCcccEEEEEcCCCcE
Q 006707 56 VFLGVDVGTGSARAGLFDESGKL 78 (634)
Q Consensus 56 ~~LGIDiGTtsiKavl~d~~g~v 78 (634)
-+||||+|+..+=.++-|..+.+
T Consensus 4 ~iLglD~G~kriGvAvsd~~~~~ 26 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRITGT 26 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTTTE
T ss_pred eEEEEEeCCCEEEEEEEcCCCCE
Confidence 58999999999999999987653
No 186
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=20.51 E-value=1e+02 Score=32.69 Aligned_cols=83 Identities=20% Similarity=0.277 Sum_probs=49.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHH--------HHHHHHhC-CCC--ccEEEEecCCC-CCHHHHHHHHHhh----C-Cce
Q 006707 480 DSSEKQLALLYLATVQGIAYGTRH--------IVEHCNAH-GHK--IDTLLACGGLA-KNPLFLQQHADII----G-CPI 542 (634)
Q Consensus 480 ~~~~~~~~~~~rAvlEgia~~~r~--------~~~~l~~~-g~~--~~~I~~~GG~a-~s~~~~Qi~Advl----g-~pV 542 (634)
..+.++.. .+|-+.+.|.-.-.+ ++..+.+. +.. .-.|-+.|+.- +.|.+.+.+...+ + .+|
T Consensus 339 ~~t~~d~~-~vr~i~~~V~~RaA~L~Aa~iaai~~k~~~~~~~~~~~~~VgvDGsvy~~~P~f~~~l~~~l~~l~~~~~v 417 (445)
T 3hm8_A 339 PLTSDDAL-MVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRGLEELAVSVGVDGTLYKLHPRFSSLVAATVRELAPRCVV 417 (445)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCTTEEE
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCcEEEEeceehccChhHHHHHHHHHHHhCCCCcE
Confidence 44555544 567777776553332 33333321 222 22455556654 4566666555554 3 577
Q ss_pred eccCCCChhhHHHHHHHHhhc
Q 006707 543 ILPRENESVLLGAAILGAVAA 563 (634)
Q Consensus 543 ~~~~~~ea~alGAA~lA~~~~ 563 (634)
......+.+.+|||++||++.
T Consensus 418 ~~~~s~DGSg~GAAl~AA~a~ 438 (445)
T 3hm8_A 418 TFLQSEDGSGKGAALVTAVAC 438 (445)
T ss_dssp EEEECSSCHHHHHHHHHHHHH
T ss_pred EEEECCCCchHHHHHHHHHHH
Confidence 777788999999999999864
Done!