Query 006710
Match_columns 634
No_of_seqs 366 out of 2521
Neff 8.9
Searched_HMMs 46136
Date Thu Mar 28 13:22:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006710.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006710hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 3.5E-55 7.7E-60 479.3 41.6 546 50-616 16-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 8E-43 1.7E-47 363.0 32.9 462 62-611 14-491 (498)
3 PRK10207 dipeptide/tripeptide 100.0 1.5E-38 3.3E-43 348.5 47.3 463 65-613 10-482 (489)
4 PRK15462 dipeptide/tripeptide 100.0 2E-36 4.3E-41 327.0 47.8 418 66-561 6-437 (493)
5 TIGR00924 yjdL_sub1_fam amino 100.0 2.1E-36 4.5E-41 331.4 46.2 453 65-611 6-472 (475)
6 PRK09584 tppB putative tripept 100.0 1.4E-35 3E-40 326.8 48.6 459 66-613 18-485 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 1.2E-30 2.5E-35 291.4 45.6 336 83-481 1-343 (654)
8 TIGR01299 synapt_SV2 synaptic 100.0 3.4E-27 7.3E-32 266.8 41.0 176 67-278 165-353 (742)
9 PRK03545 putative arabinose tr 100.0 8.4E-25 1.8E-29 234.5 43.4 375 66-608 6-381 (390)
10 PRK05122 major facilitator sup 100.0 1.4E-24 2.9E-29 233.5 43.5 377 67-608 13-390 (399)
11 TIGR00887 2A0109 phosphate:H+ 100.0 1E-25 2.3E-30 249.5 35.6 450 66-620 13-501 (502)
12 PRK14995 methyl viologen resis 100.0 7.1E-25 1.5E-29 242.3 41.9 402 67-563 4-412 (495)
13 PRK11551 putative 3-hydroxyphe 100.0 1.8E-24 4E-29 233.0 42.2 359 65-564 11-370 (406)
14 PRK10077 xylE D-xylose transpo 99.9 1.7E-25 3.8E-30 246.3 33.6 438 67-622 10-472 (479)
15 PRK12382 putative transporter; 99.9 6.2E-24 1.3E-28 227.9 43.3 372 70-606 16-388 (392)
16 PRK10504 putative transporter; 99.9 5.4E-24 1.2E-28 234.0 41.5 401 68-565 9-416 (471)
17 PRK10642 proline/glycine betai 99.9 1.3E-23 2.9E-28 231.9 42.3 175 68-270 15-203 (490)
18 PRK10489 enterobactin exporter 99.9 6.1E-24 1.3E-28 229.9 38.3 391 74-621 22-413 (417)
19 PRK11646 multidrug resistance 99.9 1.5E-23 3.3E-28 225.4 40.7 348 72-565 13-360 (400)
20 PRK11663 regulatory protein Uh 99.9 1.3E-23 2.9E-28 228.4 40.0 169 69-273 23-191 (434)
21 PRK10054 putative transporter; 99.9 5.2E-24 1.1E-28 228.6 35.4 356 67-566 5-361 (395)
22 COG2814 AraJ Arabinose efflux 99.9 5.5E-23 1.2E-27 212.9 41.0 378 65-609 9-388 (394)
23 PRK15402 multidrug efflux syst 99.9 5.2E-23 1.1E-27 221.8 42.3 354 73-564 17-370 (406)
24 TIGR00900 2A0121 H+ Antiporter 99.9 3.2E-23 7E-28 218.9 38.6 358 74-563 4-362 (365)
25 TIGR00893 2A0114 d-galactonate 99.9 2.4E-23 5.3E-28 221.8 37.5 383 91-605 15-397 (399)
26 KOG0569 Permease of the major 99.9 2.1E-24 4.6E-29 230.0 28.6 401 108-623 63-470 (485)
27 PF00854 PTR2: POT family; In 99.9 5.1E-26 1.1E-30 242.1 16.3 365 136-547 1-369 (372)
28 PRK09874 drug efflux system pr 99.9 7.2E-23 1.6E-27 220.5 41.0 380 70-608 15-399 (408)
29 TIGR00879 SP MFS transporter, 99.9 2.6E-24 5.6E-29 235.6 29.5 413 94-614 52-477 (481)
30 TIGR02332 HpaX 4-hydroxyphenyl 99.9 3.4E-23 7.3E-28 223.6 37.4 180 66-281 5-190 (412)
31 PRK10213 nepI ribonucleoside t 99.9 3.5E-22 7.6E-27 214.4 44.2 175 63-273 14-188 (394)
32 TIGR00711 efflux_EmrB drug res 99.9 2.9E-23 6.4E-28 228.9 36.4 400 71-563 4-409 (485)
33 TIGR00891 2A0112 putative sial 99.9 5.1E-23 1.1E-27 220.9 37.1 175 63-273 6-182 (405)
34 PRK12307 putative sialic acid 99.9 1.3E-22 2.7E-27 220.1 39.9 168 65-268 14-181 (426)
35 PRK09952 shikimate transporter 99.9 3.1E-22 6.8E-27 217.8 43.1 396 65-604 18-430 (438)
36 PRK09705 cynX putative cyanate 99.9 1.6E-22 3.5E-27 217.0 39.7 371 74-612 14-386 (393)
37 PRK10406 alpha-ketoglutarate t 99.9 3.1E-22 6.8E-27 217.6 42.3 176 68-271 21-210 (432)
38 TIGR00903 2A0129 major facilit 99.9 2.4E-22 5.3E-27 213.0 40.1 154 89-278 10-163 (368)
39 PRK11273 glpT sn-glycerol-3-ph 99.9 7.9E-23 1.7E-27 223.6 36.9 156 91-278 50-206 (452)
40 PRK09556 uhpT sugar phosphate 99.9 4.9E-23 1.1E-27 226.1 34.5 155 93-277 52-209 (467)
41 TIGR00899 2A0120 sugar efflux 99.9 3.5E-22 7.6E-27 212.4 40.0 365 76-604 4-371 (375)
42 TIGR00892 2A0113 monocarboxyla 99.9 1.4E-22 3E-27 221.5 37.5 352 93-564 42-395 (455)
43 TIGR00890 2A0111 Oxalate/Forma 99.9 9.8E-23 2.1E-27 216.1 35.0 355 68-564 3-357 (377)
44 KOG0254 Predicted transporter 99.9 2.4E-23 5.1E-28 231.0 31.0 403 106-624 90-500 (513)
45 TIGR00710 efflux_Bcr_CflA drug 99.9 1E-21 2.2E-26 209.5 42.4 354 67-560 3-357 (385)
46 PRK10091 MFS transport protein 99.9 5.3E-22 1.2E-26 212.2 40.1 172 69-276 3-174 (382)
47 PLN00028 nitrate transmembrane 99.9 5.1E-22 1.1E-26 218.3 40.5 176 66-278 33-217 (476)
48 PRK03699 putative transporter; 99.9 7.5E-22 1.6E-26 212.0 40.7 174 66-275 4-178 (394)
49 TIGR00898 2A0119 cation transp 99.9 2.3E-23 4.9E-28 231.2 29.6 387 95-616 114-503 (505)
50 cd06174 MFS The Major Facilita 99.9 4.3E-22 9.3E-27 208.7 37.5 347 73-604 3-349 (352)
51 PF07690 MFS_1: Major Facilita 99.9 9.8E-23 2.1E-27 214.2 31.8 351 75-555 2-352 (352)
52 PRK15011 sugar efflux transpor 99.9 3.4E-21 7.3E-26 206.8 42.4 173 70-278 16-192 (393)
53 PRK03633 putative MFS family t 99.9 2.5E-21 5.5E-26 206.9 40.8 156 68-259 5-160 (381)
54 PRK15403 multidrug efflux syst 99.9 4.8E-21 1E-25 206.8 42.0 148 95-277 41-188 (413)
55 TIGR00894 2A0114euk Na(+)-depe 99.9 7.1E-22 1.5E-26 216.9 36.1 378 99-606 70-449 (465)
56 PRK15075 citrate-proton sympor 99.9 1.7E-21 3.6E-26 212.0 38.5 176 64-267 10-199 (434)
57 PRK03893 putative sialic acid 99.9 9.1E-22 2E-26 217.8 36.8 168 65-268 16-183 (496)
58 TIGR00895 2A0115 benzoate tran 99.9 2.4E-21 5.3E-26 207.1 38.7 384 65-561 13-397 (398)
59 PRK11652 emrD multidrug resist 99.9 1E-20 2.2E-25 203.0 42.8 174 66-275 5-178 (394)
60 PRK11195 lysophospholipid tran 99.9 8.9E-21 1.9E-25 203.4 41.4 162 71-272 5-166 (393)
61 TIGR00897 2A0118 polyol permea 99.9 1.1E-20 2.5E-25 203.3 42.3 391 65-606 9-400 (402)
62 TIGR00712 glpT glycerol-3-phos 99.9 3.4E-21 7.3E-26 209.8 36.1 156 92-279 49-205 (438)
63 COG2271 UhpC Sugar phosphate p 99.9 7.6E-22 1.6E-26 201.7 28.6 397 72-611 28-438 (448)
64 PRK10473 multidrug efflux syst 99.9 4.5E-20 9.8E-25 197.9 41.4 172 71-278 5-176 (392)
65 PRK11043 putative transporter; 99.9 5.1E-20 1.1E-24 198.2 41.5 160 83-277 17-178 (401)
66 PRK09528 lacY galactoside perm 99.9 8E-21 1.7E-25 205.8 34.9 393 70-608 11-404 (420)
67 TIGR00902 2A0127 phenyl propri 99.9 5.6E-20 1.2E-24 196.6 40.9 363 71-602 6-374 (382)
68 PRK15034 nitrate/nitrite trans 99.9 4.4E-20 9.6E-25 198.0 39.5 392 61-610 23-457 (462)
69 PRK11102 bicyclomycin/multidru 99.9 6.4E-20 1.4E-24 195.5 40.5 158 85-278 7-164 (377)
70 KOG2532 Permease of the major 99.9 1.2E-21 2.7E-26 211.2 26.1 378 99-608 67-448 (466)
71 TIGR00881 2A0104 phosphoglycer 99.9 5.7E-21 1.2E-25 202.7 30.5 152 92-278 17-169 (379)
72 PRK10133 L-fucose transporter; 99.9 1.8E-19 3.9E-24 195.9 40.6 155 66-253 23-177 (438)
73 KOG1330 Sugar transporter/spin 99.9 2.4E-22 5.2E-27 207.1 16.7 182 65-282 29-211 (493)
74 TIGR00882 2A0105 oligosacchari 99.9 9.4E-20 2E-24 195.8 37.4 390 70-605 3-393 (396)
75 PRK08633 2-acyl-glycerophospho 99.9 2.3E-19 5E-24 218.5 42.8 361 70-562 10-382 (1146)
76 TIGR00889 2A0110 nucleoside tr 99.9 1E-18 2.3E-23 188.8 42.5 388 72-610 5-405 (418)
77 TIGR00886 2A0108 nitrite extru 99.9 5.1E-20 1.1E-24 195.3 29.7 158 71-264 3-171 (366)
78 PRK11128 putative 3-phenylprop 99.9 1.5E-18 3.3E-23 185.5 39.7 338 78-565 13-356 (382)
79 PRK11010 ampG muropeptide tran 99.9 4.5E-18 9.8E-23 187.5 44.2 383 70-606 13-402 (491)
80 PRK06814 acylglycerophosphoeth 99.9 3.4E-19 7.3E-24 216.7 38.7 341 105-563 52-395 (1140)
81 PF05977 MFS_3: Transmembrane 99.9 3.5E-18 7.7E-23 187.5 42.9 359 71-566 12-371 (524)
82 TIGR00883 2A0106 metabolite-pr 99.9 4.3E-19 9.3E-24 189.3 32.5 345 91-565 14-376 (394)
83 TIGR00792 gph sugar (Glycoside 99.9 8.4E-19 1.8E-23 190.8 33.8 355 79-566 9-382 (437)
84 PF00083 Sugar_tr: Sugar (and 99.8 7.1E-26 1.5E-30 247.5 -24.4 398 106-621 47-450 (451)
85 TIGR00896 CynX cyanate transpo 99.8 1.7E-18 3.7E-23 183.1 32.5 326 91-566 21-350 (355)
86 COG2223 NarK Nitrate/nitrite t 99.8 1.7E-18 3.8E-23 177.6 30.0 393 64-610 9-404 (417)
87 KOG0255 Synaptic vesicle trans 99.8 8.7E-19 1.9E-23 195.2 30.4 141 97-275 110-250 (521)
88 TIGR00901 2A0125 AmpG-related 99.8 1.6E-17 3.5E-22 175.7 34.2 157 88-277 6-175 (356)
89 PRK11902 ampG muropeptide tran 99.8 2.8E-16 6.1E-21 169.2 43.6 166 76-275 6-177 (402)
90 TIGR00885 fucP L-fucose:H+ sym 99.8 1.9E-16 4.1E-21 170.7 42.1 172 71-275 5-202 (410)
91 TIGR01301 GPH_sucrose GPH fami 99.8 2.9E-16 6.2E-21 169.8 40.6 442 71-611 6-475 (477)
92 PF06609 TRI12: Fungal trichot 99.8 1.8E-16 3.9E-21 173.7 38.8 150 90-276 64-213 (599)
93 KOG0253 Synaptic vesicle trans 99.8 1.1E-16 2.4E-21 159.8 27.8 438 66-615 75-527 (528)
94 PRK09848 glucuronide transport 99.8 3.1E-16 6.8E-21 171.3 33.3 364 71-566 10-390 (448)
95 PRK10429 melibiose:sodium symp 99.8 8.9E-16 1.9E-20 168.9 34.9 363 76-566 13-395 (473)
96 TIGR00806 rfc RFC reduced fola 99.8 9E-16 2E-20 161.9 32.4 154 89-279 45-202 (511)
97 PRK09669 putative symporter Ya 99.8 9E-16 1.9E-20 167.5 33.9 173 76-275 16-199 (444)
98 TIGR00805 oat sodium-independe 99.8 6.9E-16 1.5E-20 174.4 30.7 208 65-279 28-280 (633)
99 KOG2504 Monocarboxylate transp 99.8 1.3E-15 2.9E-20 166.5 31.9 422 72-607 45-476 (509)
100 TIGR00788 fbt folate/biopterin 99.7 1E-15 2.2E-20 167.7 30.9 175 71-278 28-207 (468)
101 TIGR02718 sider_RhtX_FptX side 99.7 3.3E-14 7E-19 152.5 41.8 176 71-278 3-182 (390)
102 COG2271 UhpC Sugar phosphate p 99.7 1.5E-17 3.2E-22 170.4 14.6 225 22-280 206-434 (448)
103 KOG3764 Vesicular amine transp 99.7 1.3E-16 2.8E-21 161.4 21.2 151 99-283 100-250 (464)
104 PF01306 LacY_symp: LacY proto 99.7 6.8E-15 1.5E-19 154.5 32.9 394 68-611 6-404 (412)
105 PF13347 MFS_2: MFS/sugar tran 99.7 1.1E-15 2.3E-20 166.1 27.5 357 79-566 11-386 (428)
106 COG2807 CynX Cyanate permease 99.7 6.1E-14 1.3E-18 141.2 37.1 349 68-566 11-361 (395)
107 COG0738 FucP Fucose permease [ 99.7 4.7E-14 1E-18 144.1 36.7 151 71-254 15-165 (422)
108 KOG2615 Permease of the major 99.7 3.3E-15 7.1E-20 150.5 26.9 117 102-254 65-181 (451)
109 PRK11462 putative transporter; 99.7 5.3E-14 1.1E-18 154.0 38.9 173 76-275 16-199 (460)
110 PTZ00207 hypothetical protein; 99.7 1.2E-13 2.7E-18 152.4 41.7 176 65-275 24-200 (591)
111 KOG2533 Permease of the major 99.7 4.7E-14 1E-18 153.0 34.5 149 98-281 74-228 (495)
112 PF03825 Nuc_H_symport: Nucleo 99.7 1.9E-13 4.2E-18 145.9 38.6 382 74-609 7-397 (400)
113 KOG0252 Inorganic phosphate tr 99.7 3.8E-16 8.2E-21 160.8 16.7 141 102-270 81-236 (538)
114 PRK10642 proline/glycine betai 99.6 3.8E-14 8.2E-19 156.7 22.0 182 65-278 246-428 (490)
115 PF11700 ATG22: Vacuole efflux 99.6 4.1E-11 9E-16 130.5 42.2 87 502-605 380-466 (477)
116 COG2211 MelB Na+/melibiose sym 99.6 6.5E-12 1.4E-16 133.4 32.5 365 72-566 15-398 (467)
117 PF03209 PUCC: PUCC protein; 99.5 1.1E-10 2.5E-15 120.7 35.8 374 96-603 6-394 (403)
118 PRK15011 sugar efflux transpor 99.5 2.9E-12 6.4E-17 137.5 24.2 172 71-278 218-389 (393)
119 PRK09556 uhpT sugar phosphate 99.5 1.4E-12 3.1E-17 143.3 20.9 175 70-277 259-446 (467)
120 KOG4686 Predicted sugar transp 99.5 3.6E-13 7.8E-18 130.2 13.3 367 69-564 44-414 (459)
121 PRK09952 shikimate transporter 99.5 3E-12 6.5E-17 139.5 21.9 184 65-279 246-432 (438)
122 TIGR00883 2A0106 metabolite-pr 99.4 2.2E-12 4.8E-17 137.5 16.5 174 65-269 215-390 (394)
123 TIGR01299 synapt_SV2 synaptic 99.4 9.5E-12 2.1E-16 141.6 22.0 134 109-278 599-732 (742)
124 KOG2325 Predicted transporter/ 99.4 6.6E-12 1.4E-16 133.6 19.0 190 61-282 26-231 (488)
125 PRK11273 glpT sn-glycerol-3-ph 99.4 5.7E-12 1.2E-16 137.9 19.2 178 70-279 254-434 (452)
126 PRK05122 major facilitator sup 99.4 2.3E-11 4.9E-16 130.8 22.1 165 80-282 227-391 (399)
127 TIGR00890 2A0111 Oxalate/Forma 99.4 9.6E-12 2.1E-16 131.7 18.4 169 71-273 207-375 (377)
128 TIGR00899 2A0120 sugar efflux 99.4 2.8E-11 6E-16 128.6 21.8 163 79-277 209-371 (375)
129 cd06174 MFS The Major Facilita 99.4 2.3E-11 5.1E-16 127.2 20.7 171 71-276 177-348 (352)
130 PRK03699 putative transporter; 99.4 2E-11 4.4E-16 131.1 20.6 171 70-276 206-376 (394)
131 TIGR00893 2A0114 d-galactonate 99.4 3.6E-11 7.9E-16 127.8 21.6 179 70-277 216-396 (399)
132 PRK11663 regulatory protein Uh 99.4 2.6E-11 5.6E-16 132.0 20.3 177 70-278 244-422 (434)
133 TIGR00880 2_A_01_02 Multidrug 99.4 7.5E-12 1.6E-16 112.4 12.6 132 112-278 5-136 (141)
134 PRK09874 drug efflux system pr 99.4 5.5E-11 1.2E-15 128.0 21.0 165 79-278 229-396 (408)
135 PRK11551 putative 3-hydroxyphe 99.3 8.1E-11 1.8E-15 126.7 22.0 166 76-277 227-393 (406)
136 KOG2563 Permease of the major 99.3 1.9E-10 4.2E-15 119.3 23.4 410 62-616 38-459 (480)
137 TIGR00889 2A0110 nucleoside tr 99.3 5.1E-11 1.1E-15 129.0 20.3 177 73-281 212-403 (418)
138 COG2270 Permeases of the major 99.3 9.5E-10 2.1E-14 113.7 28.2 107 90-222 36-150 (438)
139 PRK09705 cynX putative cyanate 99.3 1.5E-10 3.3E-15 124.2 23.4 175 71-282 207-383 (393)
140 TIGR01272 gluP glucose/galacto 99.3 1.1E-09 2.4E-14 113.4 28.9 84 185-274 8-107 (310)
141 PRK03545 putative arabinose tr 99.3 1.7E-10 3.7E-15 123.7 23.3 173 72-280 208-380 (390)
142 PRK09528 lacY galactoside perm 99.3 3.7E-11 8.1E-16 130.2 17.6 161 83-278 237-401 (420)
143 TIGR00902 2A0127 phenyl propri 99.3 2.2E-10 4.8E-15 122.5 22.9 168 70-275 206-374 (382)
144 PRK03893 putative sialic acid 99.3 7E-11 1.5E-15 130.8 19.3 149 87-268 293-441 (496)
145 PRK12382 putative transporter; 99.3 1.1E-10 2.3E-15 125.3 19.9 161 80-278 227-387 (392)
146 TIGR00891 2A0112 putative sial 99.3 6.9E-11 1.5E-15 126.7 18.4 165 66-264 235-400 (405)
147 PRK10489 enterobactin exporter 99.3 1.3E-10 2.9E-15 125.7 20.6 162 85-281 239-400 (417)
148 PRK15075 citrate-proton sympor 99.3 1.7E-10 3.7E-15 125.6 21.1 161 67-259 236-398 (434)
149 TIGR00712 glpT glycerol-3-phos 99.3 7.1E-11 1.5E-15 128.7 17.3 182 70-281 252-434 (438)
150 PRK10406 alpha-ketoglutarate t 99.3 3.7E-10 7.9E-15 122.9 22.5 180 67-278 241-422 (432)
151 KOG3626 Organic anion transpor 99.3 1.1E-09 2.3E-14 121.6 26.0 202 76-285 104-348 (735)
152 PF11700 ATG22: Vacuole efflux 99.3 4.7E-10 1E-14 122.3 22.5 186 68-280 280-468 (477)
153 PRK03633 putative MFS family t 99.3 4.2E-10 9.2E-15 120.2 21.8 154 83-275 214-367 (381)
154 TIGR00897 2A0118 polyol permea 99.3 5.6E-10 1.2E-14 120.3 22.8 175 71-278 224-399 (402)
155 PRK11010 ampG muropeptide tran 99.2 8.2E-10 1.8E-14 122.0 23.4 172 78-280 231-403 (491)
156 TIGR00881 2A0104 phosphoglycer 99.2 2E-10 4.4E-15 121.7 16.5 161 70-262 217-379 (379)
157 COG2814 AraJ Arabinose efflux 99.2 1.2E-09 2.6E-14 114.0 21.5 177 70-282 212-388 (394)
158 TIGR00892 2A0113 monocarboxyla 99.2 3.1E-10 6.6E-15 124.3 18.0 170 70-274 242-415 (455)
159 TIGR00879 SP MFS transporter, 99.2 3.5E-10 7.6E-15 123.7 17.9 186 71-281 286-471 (481)
160 TIGR01272 gluP glucose/galacto 99.2 1.9E-09 4.1E-14 111.8 20.8 161 70-268 141-303 (310)
161 PF03092 BT1: BT1 family; Int 99.2 9.4E-09 2E-13 111.4 25.6 161 92-281 12-176 (433)
162 PLN00028 nitrate transmembrane 99.2 1.2E-09 2.7E-14 120.2 18.7 175 71-280 254-433 (476)
163 COG2223 NarK Nitrate/nitrite t 99.1 1.2E-09 2.7E-14 112.8 16.9 182 70-280 219-401 (417)
164 KOG2816 Predicted transporter 99.1 3.9E-09 8.5E-14 114.0 21.5 345 88-565 40-393 (463)
165 KOG4686 Predicted sugar transp 99.1 2E-09 4.2E-14 104.7 16.9 178 61-275 256-437 (459)
166 TIGR00900 2A0121 H+ Antiporter 99.1 1.9E-09 4.1E-14 113.7 18.6 152 71-257 212-365 (365)
167 PRK12307 putative sialic acid 99.1 3.6E-09 7.7E-14 114.7 21.1 147 84-264 246-392 (426)
168 TIGR02332 HpaX 4-hydroxyphenyl 99.1 1.3E-09 2.8E-14 117.8 17.0 164 70-268 243-409 (412)
169 PRK11128 putative 3-phenylprop 99.1 6.9E-09 1.5E-13 110.9 22.2 165 71-273 207-372 (382)
170 PRK15402 multidrug efflux syst 99.1 9.9E-09 2.1E-13 110.6 23.5 171 71-272 217-387 (406)
171 PRK10504 putative transporter; 99.1 5.8E-09 1.3E-13 114.8 21.4 156 71-258 263-418 (471)
172 TIGR00894 2A0114euk Na(+)-depe 99.1 6.1E-09 1.3E-13 114.4 20.9 179 67-278 259-448 (465)
173 TIGR00882 2A0105 oligosacchari 99.1 5.5E-09 1.2E-13 112.2 20.0 169 72-275 218-390 (396)
174 PRK10091 MFS transport protein 99.1 1.1E-08 2.4E-13 109.4 22.0 170 72-277 202-373 (382)
175 TIGR02718 sider_RhtX_FptX side 99.1 1.2E-08 2.7E-13 109.3 21.8 174 71-274 210-385 (390)
176 TIGR00895 2A0115 benzoate tran 99.1 4.5E-09 9.8E-14 112.2 18.2 149 68-252 249-397 (398)
177 TIGR00711 efflux_EmrB drug res 99.1 4.1E-09 9E-14 116.2 18.3 155 71-256 257-411 (485)
178 TIGR00887 2A0109 phosphate:H+ 99.0 5.4E-09 1.2E-13 116.0 17.1 173 71-275 290-484 (502)
179 COG2270 Permeases of the major 99.0 7.9E-09 1.7E-13 106.9 16.6 174 70-278 253-427 (438)
180 PRK10077 xylE D-xylose transpo 99.0 1.9E-08 4.1E-13 110.9 21.0 163 87-281 289-458 (479)
181 TIGR00792 gph sugar (Glycoside 99.0 1.2E-08 2.6E-13 111.0 19.0 160 70-258 223-383 (437)
182 PF05977 MFS_3: Transmembrane 99.0 2.8E-08 6E-13 109.7 21.9 169 74-277 223-391 (524)
183 PRK14995 methyl viologen resis 99.0 9E-09 1.9E-13 114.0 18.2 153 70-254 260-412 (495)
184 PRK10133 L-fucose transporter; 99.0 2.2E-08 4.9E-13 109.0 20.6 164 74-275 263-428 (438)
185 TIGR00710 efflux_Bcr_CflA drug 99.0 4.4E-08 9.6E-13 104.3 22.3 162 72-265 209-371 (385)
186 PRK10213 nepI ribonucleoside t 99.0 7E-08 1.5E-12 103.7 23.5 164 71-270 218-381 (394)
187 PRK11902 ampG muropeptide tran 99.0 6.3E-08 1.4E-12 104.3 22.9 152 91-277 231-387 (402)
188 PF03137 OATP: Organic Anion T 99.0 5.1E-11 1.1E-15 131.6 -1.2 201 76-284 10-254 (539)
189 PRK15034 nitrate/nitrite trans 99.0 4.2E-08 9.1E-13 105.9 21.1 183 71-278 254-452 (462)
190 PRK08633 2-acyl-glycerophospho 99.0 2.1E-08 4.5E-13 122.7 21.1 163 71-268 234-398 (1146)
191 PF05631 DUF791: Protein of un 99.0 1.3E-06 2.7E-11 89.6 30.0 156 96-282 60-218 (354)
192 PRK10054 putative transporter; 99.0 2.1E-08 4.6E-13 107.7 18.1 172 71-277 208-381 (395)
193 TIGR00896 CynX cyanate transpo 99.0 3.6E-08 7.8E-13 104.2 19.0 152 71-257 199-350 (355)
194 PRK11646 multidrug resistance 98.9 4E-08 8.6E-13 105.8 19.3 153 87-274 226-382 (400)
195 TIGR00903 2A0129 major facilit 98.9 1.5E-07 3.2E-12 100.0 20.5 165 70-276 193-361 (368)
196 TIGR00898 2A0119 cation transp 98.9 4.3E-08 9.3E-13 108.9 16.9 131 112-277 362-492 (505)
197 PRK06814 acylglycerophosphoeth 98.9 7.2E-08 1.6E-12 117.9 19.5 183 71-268 227-410 (1140)
198 TIGR00901 2A0125 AmpG-related 98.8 8.8E-08 1.9E-12 101.2 17.5 145 70-239 210-355 (356)
199 PRK09848 glucuronide transport 98.8 5.8E-08 1.2E-12 106.2 16.4 161 71-258 230-391 (448)
200 KOG0569 Permease of the major 98.8 1.7E-07 3.7E-12 101.0 19.3 194 66-286 266-460 (485)
201 KOG0253 Synaptic vesicle trans 98.8 5.4E-08 1.2E-12 98.3 14.0 145 70-249 327-490 (528)
202 PRK11195 lysophospholipid tran 98.8 4.4E-07 9.6E-12 97.4 21.3 157 83-275 219-375 (393)
203 KOG2504 Monocarboxylate transp 98.8 1.3E-07 2.8E-12 104.0 16.9 176 69-280 298-476 (509)
204 PF07690 MFS_1: Major Facilita 98.8 3.7E-08 8E-13 103.3 12.3 142 73-246 210-352 (352)
205 COG2807 CynX Cyanate permease 98.8 5.6E-07 1.2E-11 91.5 19.8 168 71-273 210-378 (395)
206 PF13347 MFS_2: MFS/sugar tran 98.8 3E-07 6.5E-12 99.9 19.2 160 70-257 226-386 (428)
207 PRK11102 bicyclomycin/multidru 98.8 1.1E-06 2.3E-11 93.6 22.8 147 72-250 197-344 (377)
208 PRK10473 multidrug efflux syst 98.7 1E-06 2.3E-11 94.3 22.0 69 87-156 221-289 (392)
209 KOG3762 Predicted transporter 98.7 1.8E-06 3.8E-11 91.9 22.6 137 419-607 410-547 (618)
210 PRK11043 putative transporter; 98.7 1.7E-06 3.8E-11 92.9 23.4 148 81-260 215-362 (401)
211 KOG3098 Uncharacterized conser 98.7 1.5E-05 3.2E-10 85.4 29.7 80 111-220 56-135 (461)
212 KOG1330 Sugar transporter/spin 98.7 2.3E-08 5.1E-13 104.3 7.7 148 416-614 69-216 (493)
213 PRK10429 melibiose:sodium symp 98.7 1E-06 2.2E-11 97.2 19.9 165 69-258 231-396 (473)
214 TIGR00880 2_A_01_02 Multidrug 98.7 9.3E-07 2E-11 78.9 16.0 134 422-607 5-138 (141)
215 PF03825 Nuc_H_symport: Nucleo 98.7 3.1E-06 6.7E-11 90.7 22.3 178 71-278 209-393 (400)
216 TIGR00885 fucP L-fucose:H+ sym 98.7 1.4E-06 3.1E-11 94.0 19.7 162 71-270 234-402 (410)
217 PRK09669 putative symporter Ya 98.6 1.2E-06 2.6E-11 95.7 18.8 160 71-258 231-391 (444)
218 KOG2532 Permease of the major 98.6 8.5E-07 1.8E-11 96.4 17.2 182 69-279 258-446 (466)
219 PF01770 Folate_carrier: Reduc 98.6 7E-05 1.5E-09 79.0 28.6 155 90-280 24-182 (412)
220 TIGR00924 yjdL_sub1_fam amino 98.6 3E-06 6.5E-11 93.3 19.3 187 69-280 272-468 (475)
221 TIGR00886 2A0108 nitrite extru 98.6 5.6E-07 1.2E-11 95.2 13.0 139 71-241 227-365 (366)
222 PRK11652 emrD multidrug resist 98.6 9.9E-06 2.1E-10 86.9 22.5 140 88-260 226-365 (394)
223 PF01306 LacY_symp: LacY proto 98.5 9.5E-06 2.1E-10 85.9 21.0 177 70-281 221-401 (412)
224 PRK15403 multidrug efflux syst 98.5 6E-06 1.3E-10 89.3 19.6 140 420-611 56-195 (413)
225 PF06813 Nodulin-like: Nodulin 98.5 1.7E-05 3.6E-10 78.7 19.7 181 67-279 1-181 (250)
226 COG0477 ProP Permeases of the 98.5 1.2E-05 2.6E-10 81.3 19.3 140 96-268 28-173 (338)
227 PF06963 FPN1: Ferroportin1 (F 98.4 0.0012 2.7E-08 70.8 34.0 190 71-275 4-195 (432)
228 PRK11462 putative transporter; 98.4 2.8E-05 6E-10 85.4 22.0 157 73-257 232-389 (460)
229 KOG3764 Vesicular amine transp 98.4 1E-06 2.2E-11 90.4 9.4 146 415-612 106-252 (464)
230 PF03209 PUCC: PUCC protein; 98.4 3.6E-05 7.8E-10 80.3 19.6 167 79-276 218-394 (403)
231 TIGR00769 AAA ADP/ATP carrier 98.3 0.0067 1.4E-07 66.0 37.5 169 68-253 6-189 (472)
232 PRK10207 dipeptide/tripeptide 98.3 8E-06 1.7E-10 90.1 15.4 109 422-563 57-168 (489)
233 PRK09584 tppB putative tripept 98.3 4.1E-05 9E-10 84.9 19.6 174 78-277 281-476 (500)
234 PRK15462 dipeptide/tripeptide 98.3 2E-05 4.2E-10 86.3 16.4 135 420-605 50-187 (493)
235 KOG0637 Sucrose transporter an 98.3 4.3E-05 9.3E-10 80.1 17.4 165 69-252 32-202 (498)
236 COG0738 FucP Fucose permease [ 98.2 6.2E-05 1.4E-09 78.0 18.0 155 71-263 238-392 (422)
237 COG2211 MelB Na+/melibiose sym 98.2 2.2E-05 4.8E-10 84.0 14.9 157 71-254 238-395 (467)
238 TIGR00806 rfc RFC reduced fola 98.2 0.0002 4.2E-09 76.9 21.1 109 418-561 65-173 (511)
239 PTZ00207 hypothetical protein; 98.2 9.2E-05 2E-09 82.6 19.1 131 430-608 76-206 (591)
240 PF06609 TRI12: Fungal trichot 98.2 0.00014 3.1E-09 80.7 19.7 139 417-608 80-218 (599)
241 KOG3762 Predicted transporter 98.1 1.4E-05 3E-10 85.3 11.0 172 76-283 378-550 (618)
242 KOG4332 Predicted sugar transp 98.1 0.0002 4.3E-09 69.8 16.9 152 93-275 60-215 (454)
243 TIGR01301 GPH_sucrose GPH fami 98.1 0.00036 7.8E-09 76.1 20.5 208 62-282 251-473 (477)
244 KOG2533 Permease of the major 98.1 2.9E-05 6.4E-10 84.8 11.9 163 71-266 275-442 (495)
245 TIGR00788 fbt folate/biopterin 98.0 3.3E-05 7.2E-10 84.9 11.6 136 97-257 280-415 (468)
246 PF00083 Sugar_tr: Sugar (and 98.0 3.6E-08 7.8E-13 107.8 -12.2 188 70-284 253-440 (451)
247 PF12832 MFS_1_like: MFS_1 lik 97.9 9.7E-05 2.1E-09 59.1 9.4 69 75-145 6-74 (77)
248 KOG0254 Predicted transporter 97.9 0.00029 6.2E-09 78.5 16.6 196 65-283 290-486 (513)
249 KOG0252 Inorganic phosphate tr 97.9 1E-05 2.3E-10 84.6 4.4 182 67-280 302-498 (538)
250 TIGR00805 oat sodium-independe 97.9 0.00011 2.4E-09 83.6 13.0 136 417-563 70-233 (633)
251 PF02487 CLN3: CLN3 protein; 97.9 0.056 1.2E-06 57.3 32.0 61 501-561 334-394 (402)
252 PF05978 UNC-93: Ion channel r 97.7 0.0023 5E-08 58.7 15.4 110 105-250 37-146 (156)
253 KOG2615 Permease of the major 97.5 0.0019 4E-08 66.6 13.8 152 69-254 260-413 (451)
254 TIGR00926 2A1704 Peptide:H+ sy 97.4 0.027 6E-07 64.1 23.3 324 94-484 9-343 (654)
255 KOG3574 Acetyl-CoA transporter 97.4 0.11 2.5E-06 53.7 24.5 158 64-248 26-188 (510)
256 PRK03612 spermidine synthase; 97.2 0.069 1.5E-06 59.3 22.4 177 67-276 15-194 (521)
257 PF03137 OATP: Organic Anion T 97.1 0.00011 2.4E-09 81.7 0.0 180 71-256 307-515 (539)
258 PF06813 Nodulin-like: Nodulin 97.1 0.0095 2.1E-07 59.2 13.1 104 431-562 52-155 (250)
259 KOG0255 Synaptic vesicle trans 96.9 0.048 1E-06 60.8 19.2 145 70-254 323-467 (521)
260 KOG2325 Predicted transporter/ 96.9 0.0094 2E-07 64.4 12.3 161 418-613 74-235 (488)
261 PF06779 DUF1228: Protein of u 96.9 0.014 2.9E-07 47.3 9.9 64 92-156 14-77 (85)
262 KOG2816 Predicted transporter 96.8 0.0076 1.6E-07 65.6 10.7 127 91-253 263-390 (463)
263 KOG2563 Permease of the major 96.6 0.0093 2E-07 63.0 9.2 184 71-285 268-455 (480)
264 KOG3626 Organic anion transpor 96.3 0.024 5.2E-07 64.0 11.0 178 71-254 394-648 (735)
265 PF03219 TLC: TLC ATP/ADP tran 96.3 2.4 5.2E-05 46.6 28.8 175 66-254 21-205 (491)
266 KOG3810 Micronutrient transpor 96.1 0.11 2.5E-06 53.1 13.5 94 501-606 325-420 (433)
267 KOG0637 Sucrose transporter an 95.9 0.045 9.7E-07 58.0 9.7 166 374-559 33-200 (498)
268 COG3104 PTR2 Dipeptide/tripept 95.7 0.31 6.7E-06 52.6 15.3 60 185-250 392-451 (498)
269 PF03092 BT1: BT1 family; Int 95.7 0.15 3.2E-06 55.5 13.3 136 430-609 39-177 (433)
270 PF00854 PTR2: POT family; In 95.4 0.08 1.7E-06 56.3 10.0 124 458-613 3-129 (372)
271 KOG3098 Uncharacterized conser 95.2 1.6 3.5E-05 47.3 18.8 114 115-246 289-405 (461)
272 PF02487 CLN3: CLN3 protein; 95.1 0.22 4.8E-06 52.9 11.8 63 185-253 333-395 (402)
273 PF06963 FPN1: Ferroportin1 (F 94.6 1.3 2.9E-05 47.8 16.4 136 88-249 277-412 (432)
274 PF05978 UNC-93: Ion channel r 94.2 1.2 2.6E-05 40.9 12.9 62 501-562 88-149 (156)
275 PF05631 DUF791: Protein of un 92.6 15 0.00032 38.4 20.3 109 418-561 72-186 (354)
276 KOG3097 Predicted membrane pro 92.3 1.5 3.2E-05 44.9 11.0 119 64-219 24-142 (390)
277 TIGR00769 AAA ADP/ATP carrier 91.2 19 0.00042 39.4 19.3 58 506-563 132-190 (472)
278 COG3202 ATP/ADP translocase [E 91.0 27 0.00059 38.0 33.3 166 66-254 24-209 (509)
279 PF01770 Folate_carrier: Reduc 91.0 14 0.0003 39.6 17.2 62 501-563 93-154 (412)
280 TIGR00939 2a57 Equilibrative N 89.4 3.3 7.2E-05 45.0 11.5 57 186-248 371-427 (437)
281 TIGR00939 2a57 Equilibrative N 88.9 39 0.00084 36.8 30.5 60 501-560 371-430 (437)
282 PF13000 Acatn: Acetyl-coenzym 88.3 44 0.00095 36.6 22.1 59 504-562 407-465 (544)
283 KOG4332 Predicted sugar transp 86.4 6.5 0.00014 39.2 10.1 139 107-274 284-425 (454)
284 COG0477 ProP Permeases of the 85.3 8.4 0.00018 38.0 11.2 62 502-563 94-157 (338)
285 KOG3574 Acetyl-CoA transporter 79.3 37 0.0008 35.9 12.7 99 505-608 136-237 (510)
286 KOG1479 Nucleoside transporter 77.6 1.1E+02 0.0023 32.9 24.9 58 501-558 342-399 (406)
287 PF13000 Acatn: Acetyl-coenzym 75.6 41 0.00088 36.9 12.3 56 195-256 413-468 (544)
288 PF03219 TLC: TLC ATP/ADP tran 70.0 1.8E+02 0.0039 32.1 21.2 71 197-272 292-362 (491)
289 COG5336 Uncharacterized protei 68.4 19 0.00042 30.2 6.2 31 119-149 56-86 (116)
290 PF01733 Nucleoside_tran: Nucl 66.1 2.3 4.9E-05 43.9 0.5 57 186-248 247-303 (309)
291 PF11947 DUF3464: Protein of u 63.1 25 0.00055 31.9 6.5 90 127-244 56-145 (153)
292 PRK03612 spermidine synthase; 61.2 2.7E+02 0.0059 31.0 17.1 51 511-562 119-169 (521)
293 COG3202 ATP/ADP translocase [E 53.7 3.4E+02 0.0074 29.9 19.8 202 65-277 145-370 (509)
294 PF11947 DUF3464: Protein of u 52.7 30 0.00065 31.4 5.2 50 501-553 96-145 (153)
295 PF12832 MFS_1_like: MFS_1 lik 51.4 46 0.001 26.3 5.6 30 417-446 37-66 (77)
296 KOG4830 Predicted sugar transp 50.4 25 0.00054 35.0 4.6 63 75-139 23-94 (412)
297 PRK10263 DNA translocase FtsK; 49.6 2E+02 0.0044 35.5 12.7 13 120-132 63-75 (1355)
298 KOG1237 H+/oligopeptide sympor 48.5 53 0.0011 37.1 7.5 68 183-256 454-521 (571)
299 PF09527 ATPase_gene1: Putativ 47.4 1E+02 0.0022 22.5 6.5 36 112-147 7-42 (55)
300 KOG1479 Nucleoside transporter 42.1 61 0.0013 34.6 6.3 128 91-246 265-396 (406)
301 PF07857 DUF1632: CEO family ( 41.5 1.2E+02 0.0026 30.2 8.0 27 533-559 74-100 (254)
302 PF06912 DUF1275: Protein of u 37.8 3.7E+02 0.0079 25.6 18.5 34 234-268 167-200 (209)
303 TIGR01667 YCCS_YHJK integral m 33.8 3E+02 0.0065 32.0 10.7 27 130-156 51-77 (701)
304 TIGR01666 YCCS hypothetical me 32.9 5.6E+02 0.012 29.8 12.7 31 126-156 44-77 (704)
305 PF06027 DUF914: Eukaryotic pr 32.4 5.7E+02 0.012 26.6 11.6 16 587-602 287-302 (334)
306 COG2233 UraA Xanthine/uracil p 28.6 6.4E+02 0.014 27.5 11.4 141 71-253 18-159 (451)
307 KOG3880 Predicted small molecu 28.0 6.7E+02 0.015 26.1 10.6 325 108-558 65-398 (409)
308 COG3619 Predicted membrane pro 26.8 6.1E+02 0.013 24.8 18.2 67 68-135 11-84 (226)
309 COG5336 Uncharacterized protei 26.5 3.3E+02 0.0071 23.2 6.8 33 532-564 36-68 (116)
310 COG4262 Predicted spermidine s 25.3 8.3E+02 0.018 25.9 16.2 97 90-214 31-132 (508)
311 PF12273 RCR: Chitin synthesis 24.7 34 0.00073 30.2 0.9 12 259-270 1-12 (130)
312 PF06645 SPC12: Microsomal sig 24.2 3.4E+02 0.0074 21.4 6.4 42 232-276 11-52 (76)
313 TIGR02230 ATPase_gene1 F0F1-AT 24.1 2.8E+02 0.006 23.3 6.1 18 121-138 58-75 (100)
314 PF07672 MFS_Mycoplasma: Mycop 23.3 7.7E+02 0.017 24.8 14.8 258 218-563 1-267 (267)
315 PHA03231 glycoprotein BALF4; P 22.5 1.5E+02 0.0033 34.6 5.7 30 534-563 670-699 (829)
316 PF02632 BioY: BioY family; I 20.8 3.4E+02 0.0074 24.6 6.6 25 112-137 60-84 (148)
317 KOG1935 Membrane protein Patch 20.3 1E+03 0.022 28.1 11.1 86 501-601 971-1057(1143)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-55 Score=479.26 Aligned_cols=546 Identities=44% Similarity=0.748 Sum_probs=485.7
Q ss_pred CccccCCCCccccc---cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHH
Q 006710 50 TPVNVHGKPIADLS---KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGG 126 (634)
Q Consensus 50 ~~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G 126 (634)
+..++++++. .+. +++.|+++.++++.+.++++++|++..++..|++.++|.+...+...++.|.....+.+++++
T Consensus 16 ~~~d~~~~~~-~~~~~~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~ 94 (571)
T KOG1237|consen 16 TSVDYRGPLL-GSSIAFKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGA 94 (571)
T ss_pred ceeeccCCcc-cccccceechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHH
Confidence 4456665555 444 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhh
Q 006710 127 FLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRP 206 (634)
Q Consensus 127 ~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~ 206 (634)
+++|.|+||++++.++.++..+|+.++.+++..+.+.|. .| ...+....|+.+.+.....++.++.+..+|.|+.+|
T Consensus 95 ~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~--~~-~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~ 171 (571)
T KOG1237|consen 95 FLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPF--MC-KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRP 171 (571)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc--cc-cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCC
Confidence 999999999999999999999999999999888888876 33 111123469999999999999999999999999999
Q ss_pred hHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccC
Q 006710 207 CVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR 286 (634)
Q Consensus 207 ~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 286 (634)
+..++.+|||++..+.++..+.++|+|+|+..++|..++-++..|++++.||.+.|.++.+++++++++++...+.|+++
T Consensus 172 ~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~ 251 (571)
T KOG1237|consen 172 CLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYK 251 (571)
T ss_pred cchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEee
Confidence 99999999999777667777889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccc---cCCCCCCcc
Q 006710 287 LPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKED---VINPSPWKL 363 (634)
Q Consensus 287 ~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~---~~~~~~~~~ 363 (634)
++.++|+.++.+++..+.++++...+.++.. + +..........++++.+++|+++.+...+ .....||+.
T Consensus 252 ~p~gsp~t~i~~Vlvaa~~k~~~~~~~~~~~-~------~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~l 324 (571)
T KOG1237|consen 252 KPRGSPKTRIGQVLVAAAFKRKAVVSLDPEE-L------YYDCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRL 324 (571)
T ss_pred CCCCCchhHHHHHHHHHHHHHhccCCCcchh-c------cccccccccccCCcccchhhHhhccCCcccccccccCCccC
Confidence 9999999999999999999998877665433 2 11111122334466778888887665432 235688999
Q ss_pred ccchhhhHHHHHHhHhhHHHHHHHHHHHHHhhhhHHHHHHhhcccCCCC-ccccCccccchhHHHHHHHHHHHHHHHhhh
Q 006710 364 CTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGK-LKLPVTCMPVFPGLSIFLILSLYYSTFVPL 442 (634)
Q Consensus 364 ~~~~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 442 (634)
|+.+++|+.|++++.+++|++.+.+++.+.|+.+.+++|+..|+++.++ +.+|++.++.+..+..++..|+++++..|+
T Consensus 325 ct~~~Vee~K~~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~ 404 (571)
T KOG1237|consen 325 CTVTQVEEVKAVLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPF 404 (571)
T ss_pred CCceehhhhhhhhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhh
Confidence 9999999999999999999999999999999999999999999999987 999999999999999999999999999999
Q ss_pred hccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 006710 443 CRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVG 522 (634)
Q Consensus 443 ~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~ 522 (634)
.||..+++.+++.++++++|+++..++|...+.+|.+|++.+.+. ....++ +|.+|+++||+++|++|++..++
T Consensus 405 ~~~~t~~~~~~t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~~-----~~~~~~-mSi~W~iPQyvLig~~Evf~~vg 478 (571)
T KOG1237|consen 405 ARKLTGNPFGITPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVSL-----LVETNP-MSILWQIPQYVLLGAGEVFTSVG 478 (571)
T ss_pred hhhhcCCCCCCChhheeeccchHHHHHHHHHHHHHHHHhhhhhhc-----cCCCCC-eeHHHHHHHHHHHHHHHHHHhhh
Confidence 999988777899999999999999999999999999998877661 111345 99999999999999999999999
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccc-cCCccchhhHHHHHHHHHHHHHHH
Q 006710 523 LLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLA-QNINTGRFDYLYWLLAVLSVINFC 601 (634)
Q Consensus 523 ~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~-~~~~~~~~~~~f~~~a~~~~v~~~ 601 (634)
.++|.++++|++||+.+++++.+..++|++++..++.++...++ + ..+|++ +++|..+++++||+++.+..++..
T Consensus 479 ~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t~--~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~ 554 (571)
T KOG1237|consen 479 GLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFSTG--K--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFL 554 (571)
T ss_pred hHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--C--CcccCChhHhhhhHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999887663 2 457999 999999999999999999999999
Q ss_pred HHHHhhccceecccc
Q 006710 602 AFLYSAYRYKYRSEQ 616 (634)
Q Consensus 602 ~~~~~~~~~~~~~~~ 616 (634)
.+.++.++|+++..+
T Consensus 555 ~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 555 YFLICAKRYDYKDDK 569 (571)
T ss_pred heEEEEEeeeecccc
Confidence 999999999887544
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=8e-43 Score=362.97 Aligned_cols=462 Identities=18% Similarity=0.258 Sum_probs=357.6
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhH
Q 006710 62 LSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMH----KSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYW 137 (634)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~----~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~ 137 (634)
...-+|||.++.++..+++||++|||+...+..|+..+++ +|.+++.-+.+.|....++.+++|||+|||++|+|+
T Consensus 14 ~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~ 93 (498)
T COG3104 14 MKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRR 93 (498)
T ss_pred cccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhH
Confidence 3445689999999999999999999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCC
Q 006710 138 TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (634)
Q Consensus 138 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~ 217 (634)
++..+.+++++|.++++.+.. .....++++..++++|.|+++++..++++|++|
T Consensus 94 tI~lGail~~iGh~~L~~~~~--------------------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~ 147 (498)
T COG3104 94 TIVLGAILMAIGHLVLAISSV--------------------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYP 147 (498)
T ss_pred HHHHHHHHHHHHHHHHhcccc--------------------------ccccHHHHHHHHHHhccccccccHHHHHHHhcC
Confidence 999999999999999998620 245789999999999999999999999999999
Q ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCC--CCCCcHH-
Q 006710 218 ERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRL--PGGSPLT- 294 (634)
Q Consensus 218 ~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~- 294 (634)
+++++ |..+++++|++.|+|+.++|++.+++.+++||+.+|.++++.+.++++.+.+.++...... ++.++..
T Consensus 148 ~~Dpr----rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~ 223 (498)
T COG3104 148 KDDPR----RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSF 223 (498)
T ss_pred CCCcc----cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhh
Confidence 99987 9999999999999999999999999999999999999999999999999998887765442 2222221
Q ss_pred -----HHHHHHHHHHhhh-cccccccccccccccCCCccccCCCcccccCCcchH-HHHHHhhhcc-ccCCCCCCccccc
Q 006710 295 -----RVAQVLVAAFRKR-HAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRC-LDKAALELKE-DVINPSPWKLCTV 366 (634)
Q Consensus 295 -----~~~~v~~~a~~~~-~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~-~~~~~~~~~~~~~ 366 (634)
....++....... .. + ...+..+. +......... .-.....| .+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~---------~----------------l~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~ 275 (498)
T COG3104 224 NFLLPVLGGLVVMILAALLTL---------L----------------LNQNTFSGVLLVISILIAIIYFAEAFRS---PK 275 (498)
T ss_pred hhhhhhHHHHHHHHHHHHHHH---------H----------------HHHHHHHHHHHHHHHHHHHHHHHHHhcc---Cc
Confidence 1111111111110 00 0 00000000 0000000000 00000011 11
Q ss_pred hhhhHHHHHHhHhhHHHHHHHHHHHHHhhhhHHHHHHh-hcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhcc
Q 006710 367 TQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAY-TMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRR 445 (634)
Q Consensus 367 ~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr 445 (634)
.. +++||++..++++++.++||+++.|+.+.+..++. ..+++..|+++++++++++|++.++++.|+..++..|++++
T Consensus 276 ~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~ 354 (498)
T COG3104 276 VF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRG 354 (498)
T ss_pred cH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcC
Confidence 22 67899999999999999999999999998877764 44555456899999999999999999999999999998877
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 006710 446 ITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLE 525 (634)
Q Consensus 446 ~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~ 525 (634)
. +.++...++++|+++++++++++........ ..+ +..|.+|+++.|++.++||.+.+|.+++
T Consensus 355 ~----~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~---~~~----------~~~s~~~lil~y~l~s~gEL~iSpvGLs 417 (498)
T COG3104 355 N----KQPSTPIKFALGLILAGLGFLILLLAGIWFG---GPS----------GLVSVWWLVLSYVLQSFGELFISPVGLS 417 (498)
T ss_pred C----CCCCcchHHHHHHHHHHHHHHHHHHHHHhhc---CCC----------CCcCHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 4 2488899999999999999988877643310 001 1268999999999999999999999999
Q ss_pred HHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHH
Q 006710 526 FLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLY 605 (634)
Q Consensus 526 ~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~ 605 (634)
++++.+|+.+++.+|+.|.+.+..|+.++..+.+.... ++ . ..+..+...+|+.++...++.....+.
T Consensus 418 ~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~-~~------~-----~~~~~~~~~~F~~~g~v~i~~~~~~~~ 485 (498)
T COG3104 418 MVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAV-TD------P-----AYTAFIEGRVFGTIGVVAIVIGILLLL 485 (498)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccc-cc------h-----hhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888773221 00 0 001112335788887777766666665
Q ss_pred hhccce
Q 006710 606 SAYRYK 611 (634)
Q Consensus 606 ~~~~~~ 611 (634)
..++.+
T Consensus 486 ~~~~~~ 491 (498)
T COG3104 486 LSPKLN 491 (498)
T ss_pred hhHHHH
Confidence 555443
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=1.5e-38 Score=348.55 Aligned_cols=463 Identities=12% Similarity=0.167 Sum_probs=336.8
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
++|||.++.+++.++++++++|++..+++.|+++++|++.++++++.+.|....++.++++|+++||++||||+++++.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999994499999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
++.++.++++++. .....++++|+++|+|.|...|+..++++|+||+++++
T Consensus 90 ~~~~g~~~~~~~~---------------------------~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~-- 140 (489)
T PRK10207 90 VLAIGYFMTGMSL---------------------------LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR-- 140 (489)
T ss_pred HHHHHHHHHHHhc---------------------------cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh--
Confidence 9999999998862 11234668899999999999999999999999987532
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccC--CCCCCcHHHHHHHHHH
Q 006710 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR--LPGGSPLTRVAQVLVA 302 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~ 302 (634)
|++.++++|++.|+|..+||.+++++.++.|||+.|++..+.++++++.+...++.+++. ++++++.+ ..+.+..
T Consensus 141 --~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~l~ 217 (489)
T PRK10207 141 --LDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMS-FSKLLLV 217 (489)
T ss_pred --hhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchh-hhhHHHH
Confidence 688999999999999999999999999999999999998776666666666655444332 22222221 1111100
Q ss_pred HHhhhcccccccccccccccCCCccccCCCcccccCCcchH-HHHHH------hhhccccCCCCCCccccchhhhHHHHH
Q 006710 303 AFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRC-LDKAA------LELKEDVINPSPWKLCTVTQVEEVKTL 375 (634)
Q Consensus 303 a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~------~~~~~~~~~~~~~~~~~~~~~~~~k~~ 375 (634)
....-...... .+ ..+ +...... ..... ....+ ...+ ..++++.
T Consensus 218 ~~~~~~~~~~~--~~-~~~---------------~~~~~~~~~~~~~~i~~~~f~~~~----------~~~~-~~~r~r~ 268 (489)
T PRK10207 218 LLGSVVMIFVC--AW-LMH---------------NVEVANLVLIVLSIVVTIIFFREA----------FKLD-KTGRNKM 268 (489)
T ss_pred HHHHHHHHHHH--HH-HHh---------------hhhHHHHHHHHHHHHHHHHHHHHH----------hcCC-HHHHHHH
Confidence 00000000000 00 000 0000000 00000 00000 0011 2335555
Q ss_pred HhHhhHHHHHHHHHHHHHhhhhHHHHHHh-hcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCC
Q 006710 376 VRLVPIPACTIMLNVILTEFLTLSVQQAY-TMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGAS 454 (634)
Q Consensus 376 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~ 454 (634)
+....+++....+|..+.|..+.+..+.. ..+....++.+++.+++++|++.++++.|+.+++.+|+.+|.. .++
T Consensus 269 ~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~----~~~ 344 (489)
T PRK10207 269 FVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGK----DLS 344 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCC----CCC
Confidence 55666677788999999998776665554 4666666788888999999999999999999999988887743 378
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 006710 455 QLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDA 534 (634)
Q Consensus 455 ~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~ 534 (634)
+..++.+|+++.+++++.+...+... ...++ . .+.+|+++.+++.++||++.+|+.++++.+.+|++
T Consensus 345 ~~~k~~~G~~l~~~~~~~~~~~~~~~---~~~~~---------~-~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~ 411 (489)
T PRK10207 345 MPMKFTLGMFLCSLGFLTAAAAGMWF---ADAQG---------L-TSPWFIVLVYLFQSLGELFISALGLAMIAALVPQH 411 (489)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhh---cCCCC---------c-cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHH
Confidence 99999999999999987665433210 00000 1 57899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhccceec
Q 006710 535 MKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYR 613 (634)
Q Consensus 535 ~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~~~ 613 (634)
++|.++|++++.+++|+.+|..+........ ....+. .....+..+|..+++..++..++++++.++.++.
T Consensus 412 ~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~----~~~~~~----~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 412 LMGFILGMWFLTQAAAFLLGGYVATFTAVPD----NITDPL----ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----ccccch----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998887553200 000000 0011245678888888887777777776665543
No 4
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=2e-36 Score=327.00 Aligned_cols=418 Identities=16% Similarity=0.190 Sum_probs=314.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~ 145 (634)
+||+.++.+++.++++++++|++..+++.|+++.+|++..+++.+.+.+....+++++++|+++||++||||+++++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 48889999999999999999999999999999999999999999999999999999999999999977999999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
..++.+++.... .+...++++..+.++|.|...++..++++|+||+++++
T Consensus 86 ~~lg~lll~~~~---------------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~--- 135 (493)
T PRK15462 86 MAIGHVVLGASE---------------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR--- 135 (493)
T ss_pred HHHHHHHHHHhh---------------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc---
Confidence 999887665431 12233555566677888888899999999999987433
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCC-CCCCcH--HHHH----H
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRL-PGGSPL--TRVA----Q 298 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~--~~~~----~ 298 (634)
|.++++++|...|+|++++|.+++++.+.+||++.|.++++.++++++.++..++.+.+.. .+.++. ++.. .
T Consensus 136 -R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 214 (493)
T PRK15462 136 -RDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWG 214 (493)
T ss_pred -ccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHH
Confidence 9999999999999999999999999999999999999988877777777766555443321 111111 1110 0
Q ss_pred HH-HHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHH-HH---hhhccccCCCCCCccccchhhhHHH
Q 006710 299 VL-VAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDK-AA---LELKEDVINPSPWKLCTVTQVEEVK 373 (634)
Q Consensus 299 v~-~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~---~~~~~~~~~~~~~~~~~~~~~~~~k 373 (634)
.+ ....-... +... .... ......-. .. ...-.... . .....+|+|
T Consensus 215 ~~~~~~~~~~~----------~~~~-----------~~~~-~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~er~ 265 (493)
T PRK15462 215 WLLVLLVATPA----------LITV-----------LFWK-EWSVYALIVATIIGLGVLAKIY-R------KAENQKQRK 265 (493)
T ss_pred HHHHHHHHHHH----------HHHH-----------HHHH-HHHHHHHHHHHHHHHHHHHHHH-H------hcCCHHHHh
Confidence 00 00000000 0000 0000 00000000 00 00000000 0 001235788
Q ss_pred HHHhHhhHHHHHHHHHHHHHhhhhHHHHHH-hhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCC
Q 006710 374 TLVRLVPIPACTIMLNVILTEFLTLSVQQA-YTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRG 452 (634)
Q Consensus 374 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~ 452 (634)
++...+++++..++||..+.|.++.+...+ .+.|+++.++.+|+++++++|++.++++.|+..++..++.||. +.
T Consensus 266 r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~----~~ 341 (493)
T PRK15462 266 ELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGN----RT 341 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCC----CC
Confidence 888999999999999999999998665554 5688888899999999999999999999999998887775542 13
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 006710 453 ASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAP 532 (634)
Q Consensus 453 ~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P 532 (634)
++...|+.+|++++++++.++.+.... ...+| . +|.+|++..|++.++||.+.+|..++++.+.+|
T Consensus 342 ~s~~~Kfa~g~~~~g~~f~~l~~~~~~----~~~~~---------~-~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP 407 (493)
T PRK15462 342 VRIWGKFALGLGLMSAGFCILTLSARW----SAMYG---------H-SSLPLMVLGLAVMGFAELFIDPVAMSQITRIEI 407 (493)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhh----cCCCC---------C-cCHHHHHHHHHHHHHHHHHHChHHHHHHHHhCh
Confidence 788899999999999999887665422 11111 1 578999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHh-HHHHHHHHHHHHHh
Q 006710 533 DAMKSIGSAYAALAG-GLGCFAASILNSII 561 (634)
Q Consensus 533 ~~~rg~~~g~~~~~~-~ig~~lg~~l~~~v 561 (634)
++.+|++||++.+.. .+|+.++..+....
T Consensus 408 ~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 408 PGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998854 78888888877755
No 5
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=2.1e-36 Score=331.44 Aligned_cols=453 Identities=13% Similarity=0.151 Sum_probs=334.2
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYV--MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIF 142 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~ 142 (634)
.+|++.++.+++.++++++++|++.++++.|++++ +|++..+++++.+.+.++.+++++++|+++||++|||++++++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 46788899999999999999999999999999988 9999999999999999999999999999999944999999999
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcc
Q 006710 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (634)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~ 222 (634)
.++..++.++++++ .+...++++|++.|+|.|...|+..++++|++|+++.+
T Consensus 86 ~~~~~~g~~~~~~~----------------------------~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~ 137 (475)
T TIGR00924 86 GIVLMLGHFMLAMS----------------------------IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP 137 (475)
T ss_pred HHHHHHHHHHHHhc----------------------------ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc
Confidence 99999998888875 45667888999999999999999999999999876421
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHH----HH-H
Q 006710 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLT----RV-A 297 (634)
Q Consensus 223 ~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~-~ 297 (634)
.|+++++++|.+.|+|..+||.+++++.++.||++.|++.++.++++++.+...++.+++.++++++.+ +. .
T Consensus 138 ---~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (475)
T TIGR00924 138 ---RRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGK 214 (475)
T ss_pred ---cccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHH
Confidence 188899999999999999999999999998999999999887777776666665655543332222111 00 0
Q ss_pred --HH----HHHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhH
Q 006710 298 --QV----LVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEE 371 (634)
Q Consensus 298 --~v----~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 371 (634)
.. +....+.... ....... ... ......+........ ...| ..+. .+
T Consensus 215 ~~~~~~~~~~~~~~~~~~-~~~~~~~---------------~~~-----~~~~~~~~~~~~~~~-~~~~----~~~~-~~ 267 (475)
T TIGR00924 215 LLLALLAALALVFFCAWL-MHHVVIA---------------NIL-----LMTVTLAVIIFFFRL-AFKP----RLDA-VA 267 (475)
T ss_pred HHHHHHHHHHHHHHHHHH-HhccHHH---------------HHH-----HHHHHHHHHHHHHHH-HHhc----cCCH-HH
Confidence 00 0001111000 0000000 000 000000000000000 0001 0011 23
Q ss_pred HHHHHhHhhHHHHHHHHHHHHHhhhhHHHH-HHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCC
Q 006710 372 VKTLVRLVPIPACTIMLNVILTEFLTLSVQ-QAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHP 450 (634)
Q Consensus 372 ~k~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~ 450 (634)
+++....++++++..++|+.+.|..+.+.. +...++.+++++.+++++++++|++.+++++|+..++..++.||.
T Consensus 268 ~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~---- 343 (475)
T TIGR00924 268 RNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKG---- 343 (475)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCC----
Confidence 444455778888899999999998886544 445577777788899999999999999999999887766666652
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 451 RGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEE 530 (634)
Q Consensus 451 ~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~ 530 (634)
.+++...++.+|+++.+++++.+++.... ..+ ..+ ++++|+++++++.++||.+..|..++++++.
T Consensus 344 ~~~~~~~k~~~G~~l~~~~~~~~~~~~~~----~~~---------~~~-~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~ 409 (475)
T TIGR00924 344 KDPTTPLKFTLGMLFCGASFLTFAASIWF----ADA---------GGL-TSPWFMVLIYLFQTLGELMISPLGLSWWTKI 409 (475)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHhh----cCC---------CCc-cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 23677788999999999999888765311 111 112 6899999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhccc
Q 006710 531 APDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRY 610 (634)
Q Consensus 531 ~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~ 610 (634)
+|+++||+++|++.+...+|+.+++.+........ +| ..+|..++.+.++..+++++..++.
T Consensus 410 aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~--------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (475)
T TIGR00924 410 APQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ--------GV----------TGVFGKIGLVTLLVGVVMALMVPWL 471 (475)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--------ch----------hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998887654321 12 3467777777776666666666554
Q ss_pred e
Q 006710 611 K 611 (634)
Q Consensus 611 ~ 611 (634)
+
T Consensus 472 ~ 472 (475)
T TIGR00924 472 N 472 (475)
T ss_pred H
Confidence 3
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=1.4e-35 Score=326.75 Aligned_cols=459 Identities=15% Similarity=0.207 Sum_probs=331.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~ 145 (634)
++++.++.+++.++++++++|++..+++.|+++++|++.++++++.+.+....+..++++|+++||++|||++++++.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 57778999999999999999999999999999999999999999999988888888899999999944999999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
+.++..+++++. .+...++++|+++|+|.|...++..++++|++|+++.+
T Consensus 98 ~~ig~~l~~~~~---------------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~--- 147 (500)
T PRK09584 98 LAIGYALVAWSG---------------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR--- 147 (500)
T ss_pred HHHHHHHHHHhc---------------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh---
Confidence 999988887751 23456778899999999999999999999999876532
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccC--CCCCCcHHH------HH
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR--LPGGSPLTR------VA 297 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~------~~ 297 (634)
|.++++++|++.++|+.+||.+++++.++.||++.|++.++..+++++.++..++..+++ ++++++.+. ..
T Consensus 148 -~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (500)
T PRK09584 148 -LDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIV 226 (500)
T ss_pred -hhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHH
Confidence 667889999999999999999999999999999999998877666666555544433322 222222221 11
Q ss_pred HHHHHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHh
Q 006710 298 QVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVR 377 (634)
Q Consensus 298 ~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 377 (634)
.+......... ..... + . .................. ..+.. +..++++++.
T Consensus 227 ~~~~~~~~~~~----------~~~~~--~--------~-~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~ 277 (500)
T PRK09584 227 GVVALIAIATW----------LLHNQ--E--------I-ARMALGVVALGIVVIFGK-------EAFAM-KGAARRKMIV 277 (500)
T ss_pred HHHHHHHHHHH----------HHhcc--h--------H-HHHHHHHHHHHHHHHHHH-------HHhhc-CHHHHHHHHH
Confidence 11111111100 00000 0 0 000000000000000000 00011 1235566666
Q ss_pred HhhHHHHHHHHHHHHHhhhhHHHHHHh-hcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChh
Q 006710 378 LVPIPACTIMLNVILTEFLTLSVQQAY-TMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQL 456 (634)
Q Consensus 378 ~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~ 456 (634)
.+.+++..+++|..+.|.++.+..++. ..++++.++.+++++++++|++.++++.|+.+++..|+.+| .+..
T Consensus 278 ~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r-------~~~~ 350 (500)
T PRK09584 278 AFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR-------LPMP 350 (500)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC-------CCcH
Confidence 677778889999999999998777654 35666677888899999999999999999999877666665 5678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhH
Q 006710 457 QRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMK 536 (634)
Q Consensus 457 ~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~r 536 (634)
+++.+|+++++++++.+...... ..+++ . ++.+|+++.+++.++||++.+|...+++.+.+|+++|
T Consensus 351 ~~~~~G~~l~~l~f~~l~~~~~~----~~~~~---------~-vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~r 416 (500)
T PRK09584 351 HKFAIGMVLCSGAFLVLPLGAKF----ANDAG---------I-VSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLM 416 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cCCCC---------c-cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHH
Confidence 89999999999999887665421 11111 2 5788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhccceec
Q 006710 537 SIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYR 613 (634)
Q Consensus 537 g~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~~~ 613 (634)
|+++|++.+...+|+.++..+......- ....... ....++..+|..+++++++..++.+...++.++.
T Consensus 417 g~~~g~~~l~~a~g~~~~g~~~~~~~~~----~~~~~~~----~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 417 GFIMGSWFLTTAGAALIAGYVANLMAVP----DNVTDPL----MSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc----cccccch----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988887643210 0000000 0112256778888877776666666666655543
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=100.00 E-value=1.2e-30 Score=291.44 Aligned_cols=336 Identities=24% Similarity=0.416 Sum_probs=276.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhccc
Q 006710 83 MAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVF 162 (634)
Q Consensus 83 ~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~ 162 (634)
++||++...+..|+++.+|++.+.+..+.+.|....++.++++|+++|+++||++++.++.++..+|.+++++++..+..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999988875321111
Q ss_pred CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHH
Q 006710 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (634)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 242 (634)
.+ .....+++++.+.++|.|+++|+..++.+|++++++. +.|.++++++|+++|+|+
T Consensus 81 ~~--------------------~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGS 137 (654)
T TIGR00926 81 HP--------------------LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGS 137 (654)
T ss_pred cc--------------------hHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHH
Confidence 11 2345577888999999999999999999999986542 238999999999999999
Q ss_pred HHHHHHHHHHhhcc-------chHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccc
Q 006710 243 IVAFTLVVYIQMEH-------GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSE 315 (634)
Q Consensus 243 ~~~p~i~~~l~~~~-------gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~ 315 (634)
.+++++.+++.+.. +|+.+|.+++++++++++++...++.++.+++.+++..+..++++.+.+++....++
T Consensus 138 lis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~-- 215 (654)
T TIGR00926 138 LISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE-- 215 (654)
T ss_pred HHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc--
Confidence 99999999998543 699999999999999999999888888877788887777778877777654321100
Q ss_pred cccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHHHhh
Q 006710 316 LIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEF 395 (634)
Q Consensus 316 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~~~~ 395 (634)
....+|++.+... ...+.++++|++++++++++..+++|..+.|.
T Consensus 216 ----------------------~~~~~~ld~a~~~-------------~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~ 260 (654)
T TIGR00926 216 ----------------------HWPLHWLDYAKDK-------------HDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQ 260 (654)
T ss_pred ----------------------ccchhHHHHhccc-------------cccchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0012344433221 11234678899999999999999999999999
Q ss_pred hhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 006710 396 LTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGI 475 (634)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~ 475 (634)
.+.+..|+..++.+++++.+++.+++.+|++.++++.|++++.+.|..+|... .+++.+++++|+++++++++++..
T Consensus 261 ~s~~~~qa~~m~~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~---~ls~l~k~~iG~~la~la~~va~~ 337 (654)
T TIGR00926 261 GSRWTLQATRMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGT---RFTSLRKMAVGGLLAALSFFVAAL 337 (654)
T ss_pred hhHHHHHHHHhcCccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCC---CCChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888889999999999999999999999766666666432 378999999999999999999888
Q ss_pred HHHHHH
Q 006710 476 FERYRR 481 (634)
Q Consensus 476 ~~~~~~ 481 (634)
.+..+.
T Consensus 338 ve~~~~ 343 (654)
T TIGR00926 338 VQLKVN 343 (654)
T ss_pred HHHHHh
Confidence 776543
No 8
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=3.4e-27 Score=266.80 Aligned_cols=176 Identities=14% Similarity=0.054 Sum_probs=141.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 006710 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (634)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~ 146 (634)
+|+.++.+.+..+...+-. .+...+..++.+++|++..+.+++.+++.++..++.+++|+++||+ |||+++++++++.
T Consensus 165 ~~~l~~i~~l~~~~~g~d~-~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~ 242 (742)
T TIGR01299 165 QWALFFVLGLALMADGVEV-FVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 4444444444444333333 3344556677889999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
.++.++++++ .+.+.++++|+++|++.|+..+...++++|.+|++.
T Consensus 243 ~i~~ll~afa----------------------------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------ 288 (742)
T TIGR01299 243 GFFAFFSSFV----------------------------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------ 288 (742)
T ss_pred HHHHHHHHHH----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------
Confidence 9988888876 578899999999999999999999999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhc-------------cchHHHHHHHHHHHHHHHHHHHH
Q 006710 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQME-------------HGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 227 r~~~~~~~~~~~~lg~~~~p~i~~~l~~~-------------~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
|++.++++.....+|.++++.++.++... .+||+.|++.++..++.+++.++
T Consensus 289 Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~ 353 (742)
T TIGR01299 289 RGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTF 353 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999877665432 36899888877766555544433
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.95 E-value=8.4e-25 Score=234.48 Aligned_cols=375 Identities=13% Similarity=0.066 Sum_probs=251.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~ 145 (634)
++|..++.+.+..++.....+...+. ...+.+++|.|.++.++..+.+.++..++.++.|+++||+ |||+++..+.++
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 83 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGL-LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVL 83 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcc-hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHH
Confidence 45655666666666654444433333 3567889999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
..++.+.+.++ .+.+.++++|+++|++.+...+...+++.|++|+++
T Consensus 84 ~~~~~~~~~~~----------------------------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~----- 130 (390)
T PRK03545 84 FIASHVLSALA----------------------------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK----- 130 (390)
T ss_pred HHHHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh-----
Confidence 99998888886 678899999999999999999999999999999988
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHh
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFR 305 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~ 305 (634)
|++.++++..+.++|..++|.+++.+.+..|||+.|++.++..++..+..+...++.+++ ++++.++
T Consensus 131 -r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~---------- 197 (390)
T PRK03545 131 -KAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE--HSGSLKS---------- 197 (390)
T ss_pred -hhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--CcchHHH----------
Confidence 999999999999999999999999999889999999998876655544433322221100 0000000
Q ss_pred hhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhH-hhHHHH
Q 006710 306 KRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRL-VPIPAC 384 (634)
Q Consensus 306 ~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~-l~~~~~ 384 (634)
.. +....+.+... ...+..
T Consensus 198 ----------------------------------------~~--------------------~~~~~~~~~~~~~~~~~~ 217 (390)
T PRK03545 198 ----------------------------------------LP--------------------LLFRRPALVSLYLLTVVV 217 (390)
T ss_pred ----------------------------------------HH--------------------HHHhCcHHHHHHHHHHHH
Confidence 00 00000111111 111111
Q ss_pred HHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHH
Q 006710 385 TIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLA 464 (634)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~ 464 (634)
....+........ +.....+.+.. ..+.+.....+..++...+.+++.||..+| .+..+..
T Consensus 218 ~~~~~~~~~~~~~-~l~~~~g~s~~------~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~------------~~~~~~~ 278 (390)
T PRK03545 218 VTAHFTAYSYIEP-FVQQVAGLSEN------FATLLLLLFGGAGIIGSVLFSRLGNRHPSG------------FLLIAIA 278 (390)
T ss_pred HHHHHHHHHHHHH-HHHHhcCCCcc------HHHHHHHHHHHHHHHHHHHHHHHhhccchh------------HHHHHHH
Confidence 1111212111111 11111122211 122333344455566666677766665433 2444555
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 006710 465 VSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAA 544 (634)
Q Consensus 465 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~ 544 (634)
+..+++....... .+.+.+++..++.|++.+...+.....+.+..| +.|++++|+++
T Consensus 279 ~~~~~~~~l~~~~----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~ 335 (390)
T PRK03545 279 LLLVCLLLLLPAA----------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFS 335 (390)
T ss_pred HHHHHHHHHHHHh----------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHH
Confidence 4444443332221 134555566777788888777888888888877 58899999999
Q ss_pred HHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 006710 545 LAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAY 608 (634)
Q Consensus 545 ~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~ 608 (634)
...++|..+|+.+.+.+.+..+ +...|+..+++.++++++.++..+
T Consensus 336 ~~~~~g~~~G~~~~G~~~~~~g------------------~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 336 GIFNIGIGAGALLGNQVSLHLG------------------LSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhccC------------------hhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999998876433 346688888888887777766553
No 10
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.95 E-value=1.4e-24 Score=233.49 Aligned_cols=377 Identities=12% Similarity=0.023 Sum_probs=254.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 006710 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (634)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~ 146 (634)
.++.+..+....++..++.....+.++.|+.+++|.|..+.+++.+.+.++..++.++.|+++||+ ||||+++++.++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHH
Confidence 445577788888888888888888899999999999999999999999999999999999999998 9999999999988
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
.++.+.+.++...... + ..+...+++.|+++|++.+...+...+++.|.+|+++
T Consensus 92 ~~~~~~~~~~~~~~~~-~-------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------ 145 (399)
T PRK05122 92 ALSGLLYLLAGLLAAW-P-------------------VLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------ 145 (399)
T ss_pred HHHHHHHHHhhhhhcc-c-------------------hhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------
Confidence 8877766654211000 0 0256688999999999999999999999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhh
Q 006710 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRK 306 (634)
Q Consensus 227 r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~ 306 (634)
|++.++++..+.++|..++|.+++++.+..||++.+++..+..++.++. ..+. +..++++++
T Consensus 146 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~-------------- 207 (399)
T PRK05122 146 TGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLL---ARPR-PAVPPVKGE-------------- 207 (399)
T ss_pred hccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH---HhcC-CCCCCCCcc--------------
Confidence 9999999999999999999999999999899999887765543332221 1110 000000000
Q ss_pred hcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhH-hhHHHHH
Q 006710 307 RHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRL-VPIPACT 385 (634)
Q Consensus 307 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~-l~~~~~~ 385 (634)
+.++. +..|..... ....+..
T Consensus 208 ---------------------------------~~~~~-------------------------~~~~~~~~~~~~~~~~~ 229 (399)
T PRK05122 208 ---------------------------------RLPFR-------------------------RVLGRVWPYGMGLALAS 229 (399)
T ss_pred ---------------------------------chhHH-------------------------HHHHHHHHHHHHHHHHH
Confidence 00000 000111100 0011111
Q ss_pred HHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHH
Q 006710 386 IMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAV 465 (634)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l 465 (634)
..+....... ..+..+ .+.+ ..+.......+..++..++.+++.||+.+| +.+..+.++
T Consensus 230 ~~~~~~~~~~-~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~-----------~~~~~~~~~ 288 (399)
T PRK05122 230 IGFGTIATFI-TLYYAA-RGWD--------GAALALTLFGVAFVGARLLFGNLINRLGGL-----------RVAIVSLLV 288 (399)
T ss_pred HHHHHHHHHH-HHHHHH-cccc--------cchHHHHHHHHHHHHHHHHHHHHHHHhccH-----------HHHHHHHHH
Confidence 1111111111 111111 1110 112222334444555667777777776554 235566666
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHH
Q 006710 466 SILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAAL 545 (634)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 545 (634)
.+++++...... +.+.+++..++.|++.+...+.......+..|++.||+++|+++.
T Consensus 289 ~~~~~~~~~~~~-----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 345 (399)
T PRK05122 289 EILGLLLLWLAP-----------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSV 345 (399)
T ss_pred HHHHHHHHHHhc-----------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 666655444321 334455667788999988888888888899999999999999999
Q ss_pred HhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 006710 546 AGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAY 608 (634)
Q Consensus 546 ~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~ 608 (634)
...+|..+++.+.+.+.+..+ ++..|++.+++.+++++..+++.+
T Consensus 346 ~~~~g~~~~~~~~g~l~~~~g------------------~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 346 FLDLSLGITGPLAGLVASWFG------------------YPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHcC------------------HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999988887765322 356777777777777666555443
No 11
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.95 E-value=1e-25 Score=249.52 Aligned_cols=450 Identities=11% Similarity=0.003 Sum_probs=247.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYV-----MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~ 140 (634)
.+++.+.++.+..+...+-...+....+ .+..+ .+.+..+.+++.+.+.++..++.+++|+++||+ |||+++.
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~ 90 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTK-MLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYG 90 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHH
Confidence 4455555555555655555433333333 33332 234566778999999999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCC
Q 006710 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (634)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~ 220 (634)
++++++.++.++++++.. ..+ ..+...++++|+++|++.|+..+..+.+++|.+|++.
T Consensus 91 ~~~~~~~v~~~~~~~~~~---~~~-------------------~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~ 148 (502)
T TIGR00887 91 MELIIMIIATVASGLSPG---SSP-------------------KSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW 148 (502)
T ss_pred HHHHHHHHHHHHHHHccC---ccc-------------------chHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh
Confidence 999999999888777511 000 0236789999999999999999999999999999999
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-----------------------ccchHHHHHHHHHHHHHHHHHHH
Q 006710 221 KDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-----------------------EHGWGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 221 ~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~-----------------------~~gw~~~f~~~~~~~~i~~~~~~ 277 (634)
|+++.++++....+|..+++.++.++.. ..+||+.|.+.++..++.++..+
T Consensus 149 ------Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~ 222 (502)
T TIGR00887 149 ------RGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRL 222 (502)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888765432 24799999877766554444332
Q ss_pred HhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCCcc-ccCCCcccccCCcchHH-HHHHhhhcccc
Q 006710 278 IGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHS-AIKGSGKIAHTDDFRCL-DKAALELKEDV 355 (634)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~-~~a~~~~~~~~ 355 (634)
. .||+|+| +.+++++++ +.+...+..+.+..+.. +..+..... +
T Consensus 223 ~--------------------------------lpESpr~-l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 268 (502)
T TIGR00887 223 T--------------------------------IPETPRY-TADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAV-E 268 (502)
T ss_pred h--------------------------------CCCCHHH-HHHhCcchHHHHHHHHHHhccccccCcccccchhccc-c
Confidence 2 3444444 332222211 11000000000000000 000000000 0
Q ss_pred CCCCCCccccchh--hhHHHHHHhHhhHHHHH-HHHHHHHHhhhhHHHHHHhhcccCCCCcc-c-----cCccccchhHH
Q 006710 356 INPSPWKLCTVTQ--VEEVKTLVRLVPIPACT-IMLNVILTEFLTLSVQQAYTMNTHMGKLK-L-----PVTCMPVFPGL 426 (634)
Q Consensus 356 ~~~~~~~~~~~~~--~~~~k~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~ 426 (634)
....+|+++.... ...+++++.....++.. +.++....+.+ .+. +..+++....+.. . .......+..+
T Consensus 269 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p-~i~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (502)
T TIGR00887 269 VPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQK-VIL-SAIGYSPPAATNNAYEELYKTAVGNLIIALA 346 (502)
T ss_pred chhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccH-HHH-HHHcCCCCccchhHHHHHHHHHHHHHHHHHH
Confidence 0001232221110 01111111111111111 11111111111 222 2223322100000 0 00001112222
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHH
Q 006710 427 SIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLL 506 (634)
Q Consensus 427 ~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv 506 (634)
..++...+..++.||++||.. +.++.+++++++++.+...... + +...++
T Consensus 347 ~~i~g~~~~~~l~dr~gRR~~-----------l~~~~~~~~~~~~~l~~~~~~~-----------------~--~~~~~~ 396 (502)
T TIGR00887 347 GTVPGYWVTVFLVDIIGRKPI-----------QLMGFFILTVLFFVLGFAYNHL-----------------S--THGFLA 396 (502)
T ss_pred HHHHHHHHHHHHhhhhcchhH-----------HHHHHHHHHHHHHHHHHHHHhc-----------------c--hhHHHH
Confidence 334455667788899888732 4556666666655544332110 0 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhh
Q 006710 507 IQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFD 586 (634)
Q Consensus 507 ~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~ 586 (634)
...++..++.....+..+.+..|.+|++.|+++.|+.+..+++++++++.+.+.+.+..+ . ..++ . ...++.
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~--~--~~~~-~---~~~~~~ 468 (502)
T TIGR00887 397 IYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGD--P--TKGY-P---TGIWMG 468 (502)
T ss_pred HHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccc--c--cccc-c---ccccch
Confidence 111111222222345667788999999999999999999999999999999997765221 0 0000 0 001123
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccceeccccCCCC
Q 006710 587 YLYWLLAVLSVINFCAFLYSAYRYKYRSEQKHGN 620 (634)
Q Consensus 587 ~~f~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~ 620 (634)
..|++++++++++.+++ ++.+++++++.||+++
T Consensus 469 ~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 469 HVLEIFALFMFLGILFT-LLIPETKGKSLEELSG 501 (502)
T ss_pred HHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhhC
Confidence 56777777777766544 5668888887766543
No 12
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.95 E-value=7.1e-25 Score=242.30 Aligned_cols=402 Identities=13% Similarity=0.029 Sum_probs=255.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 006710 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (634)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~ 146 (634)
+|..+..+.+..++..+-...+...+| .+.+++|.+.++.+|+.+.|.++..++.+++|+++||+ |||++++++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p-~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~ 81 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAP-TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLF 81 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 466677777777777777766665555 45678999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccC-CCCCcchhh
Q 006710 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQF-DERSKDYKT 225 (634)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~-~~~~~~~~~ 225 (634)
.++.++++++ .+.+.++++|+++|+|.++..+.....+.+.+ |+++
T Consensus 82 ~~~~~~~~~a----------------------------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~----- 128 (495)
T PRK14995 82 GLASLAAAFS----------------------------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ----- 128 (495)
T ss_pred HHHHHHHHHc----------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH-----
Confidence 9999999987 67899999999999999999988888887877 4566
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHH-HHHH---H--
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLT-RVAQ---V-- 299 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~---v-- 299 (634)
|+++++++....++|..+||.+++++.++.||||.|++...+.++.+++.....++.+.++.++.+.. .+.. .
T Consensus 129 -r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~ 207 (495)
T PRK14995 129 -RNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILL 207 (495)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999877766665555444443322211111111 1100 0
Q ss_pred HHHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHh
Q 006710 300 LVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLV 379 (634)
Q Consensus 300 ~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l 379 (634)
+.....+.. . ..+ ........--............+. ....|.... +.-..+.+....
T Consensus 208 l~~~~~~~~----~-~~~-------------~~~~~~~~~~~~~~~l~~f~~~e~-~~~~p~~~~---~lf~~~~~~~~~ 265 (495)
T PRK14995 208 LVYSAKTAL----K-GFL-------------SLWVTSLTLLTGALLLGLFIRTQL-AASRPMIDM---RLFTHRIILSGV 265 (495)
T ss_pred HHHHHHhcc----c-cCC-------------chHHHHHHHHHHHHHHHHHHHHHh-cCCCCCcCH---HHhCCcccHHHH
Confidence 011111000 0 000 000000000000000000000000 011121110 000011111111
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHH
Q 006710 380 PIPACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRV 459 (634)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i 459 (634)
...++..........+...+.+...+.+. ...+.+.....+...+..++.+++.||+++| +.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~lq~v~g~s~------~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~-----------~~~ 328 (495)
T PRK14995 266 VMAMTAMITLVGFELLMAQELQFVHGLSP------LEAGMFMLPVMVASGFSGPIAGILVSRLGLR-----------LVA 328 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----------HHH
Confidence 11111111111111122223232223221 1233344445566677788888888877655 236
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHH
Q 006710 460 GIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIG 539 (634)
Q Consensus 460 ~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~ 539 (634)
..|+++.+++++.+...... .+.+......++.|+|.++..++....+.+.+|++.++.+
T Consensus 329 ~~g~~~~~~~~~~l~~~~~~--------------------~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~ 388 (495)
T PRK14995 329 TGGMALSALSFYGLAMTDFS--------------------TQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAA 388 (495)
T ss_pred HHHHHHHHHHHHHHHHhcCC--------------------CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchH
Confidence 67777777776554433210 2344455667888999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhc
Q 006710 540 SAYAALAGGLGCFAASILNSIIKS 563 (634)
Q Consensus 540 ~g~~~~~~~ig~~lg~~l~~~v~~ 563 (634)
++++++.+++|+.+|+.+.+.+..
T Consensus 389 ~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 389 GAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999997754
No 13
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.95 E-value=1.8e-24 Score=233.01 Aligned_cols=359 Identities=16% Similarity=0.080 Sum_probs=241.2
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
+++|..+....+..+++.+..+...... ..+.+++|.+.++.+++.+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAA-PRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHH
Confidence 4678778888888888877776655554 456678999999999999999999999999999999998 99999999998
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
+..++.+++.++ .+.+.+++.|++.|++.+...+...+++.|.+|+++
T Consensus 89 ~~~~~~~~~~~~----------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---- 136 (406)
T PRK11551 89 LFGLFSLATAQA----------------------------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL---- 136 (406)
T ss_pred HHHHHHHHHHHh----------------------------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH----
Confidence 888887777765 567888999999999999999999999999999988
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHH
Q 006710 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAF 304 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~ 304 (634)
|++.+++++.+.++|..++|.+++.+.+..+|++.|++.+++.++..+......++.+...+++..
T Consensus 137 --r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------------ 202 (406)
T PRK11551 137 --RGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA------------ 202 (406)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc------------
Confidence 999999999999999999999998888888999999887765444444333322221100000000
Q ss_pred hhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhh-HHH
Q 006710 305 RKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVP-IPA 383 (634)
Q Consensus 305 ~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~-~~~ 383 (634)
. .+.....+. ..+ + ...+....... .+.
T Consensus 203 --------------------~------------~~~~~~~~~-----------------~~~-~-~~~~~~~~~~~~~~~ 231 (406)
T PRK11551 203 --------------------G------------KQRAPVLRA-----------------LFG-E-GRATATLLLWISYFF 231 (406)
T ss_pred --------------------c------------hhhhhhHHH-----------------Hhh-h-hhhhHHHHHHHHHHH
Confidence 0 000000000 000 0 00111111111 111
Q ss_pred HHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHH
Q 006710 384 CTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGL 463 (634)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~ 463 (634)
....++....+.+ .+. +..+.+. ...+.......+..++...+.+++.||+++|. .+.++.
T Consensus 232 ~~~~~~~~~~~~p-~~~-~~~g~s~------~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----------~~~~~~ 292 (406)
T PRK11551 232 TLIVLYFLLNWLP-SLL-VGQGLSR------SQAGLVQIAFNIGGALGSLLIGALMDRLRPRR-----------VVLLIY 292 (406)
T ss_pred HHHHHHHHHHHHH-HHH-HhCCCCh------hhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH-----------HHHHHH
Confidence 1111222211111 111 1112211 12334444455666777788888888877662 133344
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHH
Q 006710 464 AVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYA 543 (634)
Q Consensus 464 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~ 543 (634)
+..++++..+.... +.+.+....++.+++.....+...++..+.+|++.|++++|+.
T Consensus 293 ~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 349 (406)
T PRK11551 293 AGILASLAALAAAP-----------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAA 349 (406)
T ss_pred HHHHHHHHHHHhcC-----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHH
Confidence 44444433332211 3344445556677777777888899999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhcc
Q 006710 544 ALAGGLGCFAASILNSIIKSV 564 (634)
Q Consensus 544 ~~~~~ig~~lg~~l~~~v~~~ 564 (634)
+....+|..+++.+.+.+.+.
T Consensus 350 ~~~~~~g~~~g~~~~g~l~~~ 370 (406)
T PRK11551 350 VAVGRLGSMAGPLLAGQLLAL 370 (406)
T ss_pred HHhhhHHHHHHhhhHhhhhcc
Confidence 999999999999999987653
No 14
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.95 E-value=1.7e-25 Score=246.34 Aligned_cols=438 Identities=14% Similarity=0.112 Sum_probs=250.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHH
Q 006710 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVM--------HKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWT 138 (634)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~--------~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~ 138 (634)
+.+.++...+..+...+....+... ...+++.+ +.+..+.+++.+.+.++..++++++|+++||+ |||++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~ 87 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGT-VESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDS 87 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHh-HHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHH
Confidence 4455555555555544443322222 23345555 88999999999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCC
Q 006710 139 IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (634)
Q Consensus 139 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~ 218 (634)
++++.+++.++.+.++++........ .++......++++|+++|++.|+..+...++++|++|+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~ 151 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIG----------------PDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPA 151 (479)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccc----------------ccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCCh
Confidence 99999999888877776321000000 01113467788999999999999999999999999999
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh--------hccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCC
Q 006710 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGG 290 (634)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~--------~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 290 (634)
++ |++.++++..+..+|..+++.++..+. +..|||+.|++.++..++..+..++ .++.++.....
T Consensus 152 ~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~-l~~s~~~l~~~ 224 (479)
T PRK10077 152 HI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYF-VPETPRYLMSR 224 (479)
T ss_pred hh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHc-CCCCcHHHHHc
Confidence 98 999999999999999999987766543 3568999999877666555444333 22211100000
Q ss_pred CcHHHHHHHHHHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhh
Q 006710 291 SPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVE 370 (634)
Q Consensus 291 ~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 370 (634)
+..++..+.. + + ... ..+..+..+........ +.+
T Consensus 225 ~~~~~~~~~~----~-~-----------~~~---------------~~~~~~~~~~~~~~~~~--------------~~~ 259 (479)
T PRK10077 225 GKQEQAEGIL----R-K-----------IMG---------------NTLATQALQEIKHSLDH--------------GRK 259 (479)
T ss_pred CCHHHHHHHH----H-H-----------HcC---------------ChhHHHHHHHHHHHHHH--------------hhh
Confidence 0000000000 0 0 000 00000000000000000 000
Q ss_pred HHHHHHhHhhHHHHHHHHHHHHHhhhh--------HHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhh
Q 006710 371 EVKTLVRLVPIPACTIMLNVILTEFLT--------LSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPL 442 (634)
Q Consensus 371 ~~k~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 442 (634)
..+..+......+........+.+... ....+..+++.. ..........+..++..++.+++.||+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~------~~~~~~~~~~~~~~i~~~~~g~l~dr~ 333 (479)
T PRK10077 260 TGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTD------IALLQTIIVGVINLTFTVLAIMTVDKF 333 (479)
T ss_pred hhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCc------hHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000000000000000000011111110 011111111111 122233334555667777888888888
Q ss_pred hccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHH-HHH
Q 006710 443 CRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVF-CIV 521 (634)
Q Consensus 443 ~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~-~~~ 521 (634)
+||. .+..|.++++++++.+...... . ....+.+...++.+.+... ..|
T Consensus 334 g~r~-----------~~i~~~~~~~v~~~~l~~~~~~------------------~-~~~~~~~~~~~~~~~~~~~~~~~ 383 (479)
T PRK10077 334 GRKP-----------LQIIGALGMAIGMFSLGTAFYT------------------Q-APGIVALLSMLFYVAAFAMSWGP 383 (479)
T ss_pred cChH-----------HHHHhHHHHHHHHHHHHHHHhc------------------C-cccHHHHHHHHHHHHHHhccccc
Confidence 7763 3677777777777666543211 0 1222333333444444443 336
Q ss_pred HHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHH
Q 006710 522 GLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFC 601 (634)
Q Consensus 522 ~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~ 601 (634)
..+.++.+.+|++.|++++|+.+...++++.+++.+.+.+.. .+|+.++ .+....|++.+++++++++
T Consensus 384 ~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~---------~~~~~~~---~~~~~~~~~~~~~~~~~~~ 451 (479)
T PRK10077 384 VCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDK---------NSWLVAH---FHNGFSYWIYGCMGVLAAL 451 (479)
T ss_pred hhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHh---------ccchhhh---ccCccHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999988876542 1121111 1112456777777777777
Q ss_pred HHHHhhccceeccccCCCCch
Q 006710 602 AFLYSAYRYKYRSEQKHGNDY 622 (634)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~ 622 (634)
+.+++.+++|+++.||.++.+
T Consensus 452 ~~~~~~~e~~~~~~~~~~~~~ 472 (479)
T PRK10077 452 FMWKFVPETKGKTLEEMEALW 472 (479)
T ss_pred HHHhccccCCCCCHHHHHHHH
Confidence 777777777776655444333
No 15
>PRK12382 putative transporter; Provisional
Probab=99.95 E-value=6.2e-24 Score=227.86 Aligned_cols=372 Identities=12% Similarity=0.025 Sum_probs=247.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.++.+.+..++..++.....+.++.|+.+++|.|.++.+++.+.+.++..++.++.|+++||+ ||||+++++.++..++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGLA 94 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHHH
Confidence 456666667777777777778888899999999999999999999999999999999999998 9999999998877766
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
.+...+....+.. . ..+...++++|+++|++.+...+...+++.|.+|+++ |++
T Consensus 95 ~~~~~~~~~~~~~-~-------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~ 148 (392)
T PRK12382 95 GLAYLLAAILPVS-A-------------------PFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGK 148 (392)
T ss_pred HHHHHhhhccccc-h-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cch
Confidence 5443332111100 0 0467889999999999999988989999999999988 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcc
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHA 309 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~ 309 (634)
+++++..+.++|..++|.+++++.+..||++.+.+..+..++.+ ...+ +.++.+++++.
T Consensus 149 a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~----------------- 207 (392)
T PRK12382 149 VMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW---AFNG-TVRKVPAHAGE----------------- 207 (392)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH---HHHH-hccCCCCCccc-----------------
Confidence 99999999999999999999999888999987665544322222 1111 11110000000
Q ss_pred cccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHh-HhhHHHHHHHH
Q 006710 310 AFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVR-LVPIPACTIML 388 (634)
Q Consensus 310 ~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~l~~~~~~~~~ 388 (634)
+.+.. +..|.+.. .+...+....+
T Consensus 208 ------------------------------~~~~~-------------------------~~~~~~~~~~~~~~l~~~~~ 232 (392)
T PRK12382 208 ------------------------------RPSLW-------------------------SVVGLIWKPGLGLALQGVGF 232 (392)
T ss_pred ------------------------------CchHH-------------------------HHHHHHHHhHHHHHHHHHHH
Confidence 00000 00000000 00111111111
Q ss_pred HHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHH
Q 006710 389 NVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSIL 468 (634)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~ 468 (634)
....... ..+..+ .+. . ..+.......+..++..++.+++.||+.+|+. +..+.++.++
T Consensus 233 ~~~~~~~-~~~~~~-----~~~---~-~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-----------~~~~~~~~~~ 291 (392)
T PRK12382 233 AVIGTFV-SLYFAS-----KGW---A-MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV-----------AIVSLLVETV 291 (392)
T ss_pred hHHHHHH-HHHHHh-----cCC---c-hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-----------hHHHHHHHHH
Confidence 1111111 111111 110 1 11222223444456667778888887776632 5556666666
Q ss_pred HHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhH
Q 006710 469 SVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGG 548 (634)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ 548 (634)
+++...... +.++..+..++.+++.+...+.......+.+|++.||++.|+++....
T Consensus 292 ~~~~~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 348 (392)
T PRK12382 292 GLLLLWLAP-----------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQD 348 (392)
T ss_pred HHHHHHHcc-----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 655443321 334455567778889888888888899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHh
Q 006710 549 LGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYS 606 (634)
Q Consensus 549 ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~ 606 (634)
+|+.+++.+.+.+.+..+ | ...|.+.+++.+++.++.++.
T Consensus 349 ~g~~ig~~~~g~l~~~~g--------~----------~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 349 IAYGVSGPLAGMLATSFG--------Y----------PSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHHhC--------c----------hHHHHHHHHHHHHHHHHHHhh
Confidence 999999999998876432 3 466777777777776665544
No 16
>PRK10504 putative transporter; Provisional
Probab=99.95 E-value=5.4e-24 Score=234.03 Aligned_cols=401 Identities=11% Similarity=0.008 Sum_probs=248.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 006710 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (634)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~ 147 (634)
.+.++.+.+..++..+..+.+.+.++.+.. ++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++.+.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 345777888888888888888887777664 6999999999999999999999999999999998 99999999988888
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
++.+++.++ .+.+.++++|+++|++.+...+...+++.|.+|+++ |
T Consensus 87 ~~~~~~~~~----------------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~ 132 (471)
T PRK10504 87 LGSLFCALS----------------------------GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------Y 132 (471)
T ss_pred HHHHHHHHh----------------------------CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------H
Confidence 888777665 567888999999999999999999999999999888 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHH-HHHHHHhh
Q 006710 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQ-VLVAAFRK 306 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~a~~~ 306 (634)
++.+++++...++|..++|.+++++.+..||++.|++......+..+......++.+.++.. ........ ........
T Consensus 133 ~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~~~~~ 211 (471)
T PRK10504 133 MAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRR-FDLSGFLLLAVGMATLT 211 (471)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCC-CChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998776665555554444332222111 11111100 00000000
Q ss_pred hcccccccccccccccCCCccccCCCcccccCCcc-hHHH-----HHHhhhccccCCCCCCccccchhhhHHHHHHhHhh
Q 006710 307 RHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDF-RCLD-----KAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVP 380 (634)
Q Consensus 307 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~ 380 (634)
... .+.+. .. . ..... .... .......+. ....+.. ..+....|.+...+.
T Consensus 212 ~~~--~~~~~-------------~~---~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~l~~~~~~~~~l~ 268 (471)
T PRK10504 212 LAL--DGSKG-------------LG---L-SPLAIAGLVAVGVVALLLYLLHAR-NNNRALF---SLKLFRTRTFSLGLA 268 (471)
T ss_pred HHH--hcCCc-------------CC---c-chHHHHHHHHHHHHHHHHHHHHHh-cCCCCcc---CHHHhcccchHHHHH
Confidence 000 00000 00 0 00000 0000 000000000 0001100 000111122222211
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHH
Q 006710 381 IPACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVG 460 (634)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~ 460 (634)
..++.............++.++..+.+. ...+.+.....+..++..++.+++.||+++|. .+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~------~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~-----------~~~ 331 (471)
T PRK10504 269 GSFAGRIGSGMLPFMTPVFLQIGLGFSP------FHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRR-----------VLV 331 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH-----------HHH
Confidence 1111111111122222233322222211 11222223333444455567777777776652 355
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHH
Q 006710 461 IGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGS 540 (634)
Q Consensus 461 ~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~ 540 (634)
.|.++.+++..++..... . .+.+++...+++.|++.++..+..+....+.+|++.++.++
T Consensus 332 ~~~~~~~~~~~~~~~~~~-------------------~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 391 (471)
T PRK10504 332 ATTLGLALVSLLFMLVAL-------------------L-GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGN 391 (471)
T ss_pred HHHHHHHHHHHHHHhccc-------------------c-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchH
Confidence 566656555444433210 0 12333344566778899999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhccc
Q 006710 541 AYAALAGGLGCFAASILNSIIKSVT 565 (634)
Q Consensus 541 g~~~~~~~ig~~lg~~l~~~v~~~~ 565 (634)
|++++.+.+|..+|+.+.+.+.+..
T Consensus 392 ~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 392 SLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999876643
No 17
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=1.3e-23 Score=231.90 Aligned_cols=175 Identities=18% Similarity=0.133 Sum_probs=131.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH-HHH-----HHHHHHHHHHHHHHHHHHHhhhccchhHHHHH
Q 006710 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD-SSN-----AVNNFLGISQASSVLGGFLADAYLGRYWTIAI 141 (634)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~-~~~-----~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~ 141 (634)
++.++...+..+++.+-+. +..+...++.++++.+.+. ..+ +.+++.++..++.+++|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 4556666677777776664 4556677888888644322 122 24667788889999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCc
Q 006710 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (634)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~ 221 (634)
+++++.++.++++++..+..+.. .....++++|+++|++.|+..+...++++|.+|+++
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g~--------------------~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~- 151 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIGI--------------------WAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK- 151 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHHH--------------------HHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC-
Confidence 99999999999988721100000 011248899999999999999999999999999998
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh--------hccchHHHHHHHHHHHH
Q 006710 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMG 270 (634)
Q Consensus 222 ~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~--------~~~gw~~~f~~~~~~~~ 270 (634)
|++..++...+..+|..+|+.+...+. ..+|||+.|++.++..+
T Consensus 152 -----Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l 203 (490)
T PRK10642 152 -----RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGI 203 (490)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHH
Confidence 999999988888888888876654432 25799999998765443
No 18
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.94 E-value=6.1e-24 Score=229.92 Aligned_cols=391 Identities=15% Similarity=0.047 Sum_probs=245.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 006710 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (634)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~ 153 (634)
+....++..++.......++.+. ++++.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~ 99 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGL 99 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHH
Confidence 33445555566544455555554 56778999999999999999999999999999998 99999999888777766655
Q ss_pred HHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHH
Q 006710 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (634)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 233 (634)
...... .. .+.+.+++.|++.|++.+...+...+++.|.+|+++ |+++.++
T Consensus 100 ~~~~~~----~~-------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 150 (417)
T PRK10489 100 ALNAFL----PE-------------------PSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAI 150 (417)
T ss_pred HHHHHc----CC-------------------CcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHH
Confidence 432110 00 456778889999999998888999999999999988 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCC-CCCCcHHHHHHHHHHHHhhhccccc
Q 006710 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRL-PGGSPLTRVAQVLVAAFRKRHAAFS 312 (634)
Q Consensus 234 ~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~a~~~~~~~~p 312 (634)
.+...++|..+||.+++++.+..+|++.|++.++..++..+..+.. ++.+.++ +..++..
T Consensus 151 ~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~------------------ 211 (417)
T PRK10489 151 TMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRL-PALPPPPQPREHPLR------------------ 211 (417)
T ss_pred HHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC-CCCCCCCcccccchH------------------
Confidence 9999999999999999999888899999988776655554443322 2111000 0000000
Q ss_pred ccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHH
Q 006710 313 SSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVIL 392 (634)
Q Consensus 313 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~ 392 (634)
+..+.... ....+.+........+........
T Consensus 212 -----------------------------~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 243 (417)
T PRK10489 212 -----------------------------SLLAGFRF-------------------LLASPVVGGIALLGGLLTMASAVR 243 (417)
T ss_pred -----------------------------HHHHHHHH-------------------HHcChHHHHHHHHHHHHHHHHhHH
Confidence 00000000 000011111111111111111111
Q ss_pred HhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 006710 393 TEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIW 472 (634)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~ 472 (634)
.. ...+..+..+.+. ...+.+.....+..++...+.+++.|+.. +.+.+..+.++.+++++.
T Consensus 244 ~~-~p~~~~~~~g~~~------~~~g~~~~~~~~g~~ig~~~~~~l~~~~~-----------~~~~l~~~~~~~~~~~~~ 305 (417)
T PRK10489 244 VL-YPALADEVWQMGA------AQIGLLYAAVPLGAALGALTSGWLAHSAR-----------PGLLMLLSTLGSFLAVGL 305 (417)
T ss_pred Hh-hHHHHHhccCCCh------hHhHHHHHHHHHHHHHHHHHHHHhhhccC-----------cchHHHHHHHHHHHHHHH
Confidence 11 1112221112111 11223333344444455555555444311 122355666666666554
Q ss_pred HHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHH
Q 006710 473 AGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCF 552 (634)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~ 552 (634)
+.... +.+......++.|++.+...+...++..+..|++.||+++|+++....+|..
T Consensus 306 ~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ 362 (417)
T PRK10489 306 FGLMP-----------------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDA 362 (417)
T ss_pred HHccc-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHh
Confidence 43221 3444555667778888888888889999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhccceeccccCCCCc
Q 006710 553 AASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYRSEQKHGND 621 (634)
Q Consensus 553 lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 621 (634)
+|+.+.+.+.+..+ ....++..+++.++..++.+...+++|++++||+++|
T Consensus 363 ~g~~l~G~l~~~~g------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 363 IGAALLGGLGAMMT------------------PVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred HHHHHHHHHHHHhc------------------hhhHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence 99999998876433 1245666666666666666666677777776665543
No 19
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=1.5e-23 Score=225.37 Aligned_cols=348 Identities=14% Similarity=0.128 Sum_probs=235.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 006710 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (634)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~ 151 (634)
++++...++..++.+.+.+.++.|+++++|+|..+.+.+.+.+.+...+..+++|+++||+ |||+++.++.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 6667888899999999999999999999999999999999999999999999999999998 999999999999999888
Q ss_pred HHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHH
Q 006710 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (634)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 231 (634)
.+.+. .+.+.+++.|+++|++.+...|...+++.|.+|+++ |++++
T Consensus 92 ~~~~~----------------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~ 137 (400)
T PRK11646 92 TMAIA----------------------------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFF 137 (400)
T ss_pred HHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHH
Confidence 88765 567888999999999999889999999999999988 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccc
Q 006710 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAF 311 (634)
Q Consensus 232 ~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~ 311 (634)
++++...++|..+||.+++++. .++|++.|++.+...++..++.....++.+.+ +..++
T Consensus 138 ~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~------------------- 196 (400)
T PRK11646 138 SLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS-TVRTP------------------- 196 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc-ccchh-------------------
Confidence 9999999999999999999998 67999999987766555444333322211000 00000
Q ss_pred cccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHH
Q 006710 312 SSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVI 391 (634)
Q Consensus 312 p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~ 391 (634)
..+. ++. -.++++ +...... ...++..
T Consensus 197 -------------------------------~~~~--------------~~~----~~~~~~-~~~~~~~---~~~~~~~ 223 (400)
T PRK11646 197 -------------------------------VREG--------------MTR----VLRDKR-FVTYVLT---LTGYYML 223 (400)
T ss_pred -------------------------------hHHH--------------HHH----HHcCch-HHHHHHH---HHHHHHH
Confidence 0000 000 000111 1111111 1111111
Q ss_pred HHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHH
Q 006710 392 LTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVI 471 (634)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~ 471 (634)
..+....++.+... .. +.....+.+..+..+.........+++.|+ | ....+.+..+.++.++++.
T Consensus 224 ~~~~~~~~p~~~~~--~~--~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~---r-------~~~~~~~~~~~~~~~~~~~ 289 (400)
T PRK11646 224 AVQVMLMLPIMVND--IA--GSPSAVKWMYAIEACLSLTLLYPIARWSEK---R-------FRLEHRLMAGLLIMSLSMF 289 (400)
T ss_pred HHHHHHhhhhhHHh--hc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHH---h-------cchhHHHHHHHHHHHHHHH
Confidence 11211111111111 00 001112222222333222222222333322 2 1222345666666666665
Q ss_pred HHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHH
Q 006710 472 WAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGC 551 (634)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~ 551 (634)
.++... +.++++...++.+++++...|...+.+.+.+|++.||+++|+.++...+|.
T Consensus 290 ~l~~~~-----------------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 346 (400)
T PRK11646 290 PIGMVS-----------------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGG 346 (400)
T ss_pred HHHHhh-----------------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHH
Confidence 554332 233444455677888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccc
Q 006710 552 FAASILNSIIKSVT 565 (634)
Q Consensus 552 ~lg~~l~~~v~~~~ 565 (634)
.+|+.+.+.+.+.+
T Consensus 347 ~ig~~l~G~l~~~~ 360 (400)
T PRK11646 347 AIGYIGGGWLFDLG 360 (400)
T ss_pred HhcccchHHHHHHH
Confidence 99999999987754
No 20
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.94 E-value=1.3e-23 Score=228.38 Aligned_cols=169 Identities=11% Similarity=0.041 Sum_probs=142.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 006710 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (634)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~ 148 (634)
+..+..++..++..+..+.+...++. +.+++|+|.++.+++.+.+.++..++.+++|+++||+ |||+++.++.++..+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPE-MLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHH
Confidence 33444444555555544455555554 4567999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhh
Q 006710 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (634)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~ 228 (634)
+.+++.++ .+.+.+++.|++.|++.|...+...+++.|++|+++ |+
T Consensus 101 ~~~~~~~~----------------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg 146 (434)
T PRK11663 101 INILFGFS----------------------------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RG 146 (434)
T ss_pred HHHHHHHH----------------------------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HH
Confidence 88888776 577888899999999999989999999999999988 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHH
Q 006710 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISN 273 (634)
Q Consensus 229 ~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~ 273 (634)
+.+++++.+.++|..++|.+++++.+.+|||+.|++.++..++..
T Consensus 147 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 147 GWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998999999988776544443
No 21
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=5.2e-24 Score=228.58 Aligned_cols=356 Identities=12% Similarity=0.071 Sum_probs=237.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 006710 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (634)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~ 146 (634)
.+|+++.+.+..++..++.+.+.++++.|+++++|+|..+++++.+.+.++..++.++.|+++||+ |||+++.++.++.
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~ 83 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAF 83 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHH
Confidence 445678888889999999999999999999999999999999999999999999999999999998 9999999999888
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
.++.+++.++ ++.+.+++++.+.|.+.+...++..++.+|.+|+++
T Consensus 84 ~~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------ 129 (395)
T PRK10054 84 ASGFIAIPLV----------------------------NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------ 129 (395)
T ss_pred HHHHHHHHHH----------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------
Confidence 8887777765 566777778888888888888899999999999888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhh
Q 006710 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRK 306 (634)
Q Consensus 227 r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~ 306 (634)
|++.+++.+...++|..++|.+++++.+ .+|+..|++.+++.++.++......++.+ ++++++...
T Consensus 130 ~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~--~~~~~~~~~----------- 195 (395)
T PRK10054 130 KTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSE--KAIATETGS----------- 195 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccc--cccccchhh-----------
Confidence 9999999999999999999999998875 78999999887776665544333222111 000000000
Q ss_pred hcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHh-hHHHHH
Q 006710 307 RHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLV-PIPACT 385 (634)
Q Consensus 307 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l-~~~~~~ 385 (634)
.+ +. . +....|.+.... ..++..
T Consensus 196 ---------~~---------------------------~~-----~---------------~~~~~~~~~~~~~~~~l~~ 219 (395)
T PRK10054 196 ---------VW---------------------------SP-----S---------------VLLQDKALLWFTCSGFLAS 219 (395)
T ss_pred ---------hh---------------------------hh-----h---------------hhccCceehHHHHHHHHHH
Confidence 00 00 0 000001111111 111111
Q ss_pred HHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHH
Q 006710 386 IMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAV 465 (634)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l 465 (634)
.......... ..+..... +.... ....+.+..++.+......+..+++.|+..+| ..+.+|+++
T Consensus 220 ~~~~~~~~~~-~~~~~~~~--~~~~~--~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~l~~~~~~ 283 (395)
T PRK10054 220 FVSGAFASCI-SQYVMVVA--DSDFA--EKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR-----------PLMTAGTLC 283 (395)
T ss_pred HHHHHhhhhH-HHHHHHhc--ccchH--HHHHHHHHHhhhhheeeehhHHHHHHccCCch-----------hHHHHHHHH
Confidence 1111111111 11111111 11100 00112222333333334444445555444333 346677766
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHH
Q 006710 466 SILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAAL 545 (634)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 545 (634)
.++++..+.... .+.+.+.+..++.++|+....|...+.+.+.+|++.++.+.+..+
T Consensus 284 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~- 340 (395)
T PRK10054 284 FVIGLVGFIFSG----------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS- 340 (395)
T ss_pred HHHHHHHHHHcc----------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-
Confidence 666665544321 133434456678899999999999999999999999999998766
Q ss_pred HhHHHHHHHHHHHHHhhcccC
Q 006710 546 AGGLGCFAASILNSIIKSVTG 566 (634)
Q Consensus 546 ~~~ig~~lg~~l~~~v~~~~~ 566 (634)
..++|..+|+.+.+.+.+..+
T Consensus 341 ~~~~G~~~Gp~~~G~l~~~~g 361 (395)
T PRK10054 341 LGWLGAAINPLVSGVILTTLP 361 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 567999999999999887543
No 22
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=5.5e-23 Score=212.93 Aligned_cols=378 Identities=15% Similarity=0.119 Sum_probs=264.6
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
+..|..++.+.+..|.....-+.... +.+-+.+++|.|..++|+.++.|..+..++.|+...++||+ .||++++..+.
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~g-LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVG-LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHh-chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHH
Confidence 34566778888888877777765554 45568899999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
+++++.++++++ +|+..+.++|++.|+..|.+++...++.+++.|+++
T Consensus 87 lFi~~n~l~alA----------------------------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~---- 134 (394)
T COG2814 87 LFIVSNLLSALA----------------------------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK---- 134 (394)
T ss_pred HHHHHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc----
Confidence 999999999998 789999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCC--CCCcHHHHHHHHHH
Q 006710 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLP--GGSPLTRVAQVLVA 302 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~ 302 (634)
|++++++...+..++..+|..++.++.+.+|||..|++..+..++.++..+...| +.+.+ .+.++.+..++
T Consensus 135 --~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~~~~~~~~~--- 207 (394)
T COG2814 135 --RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISGSLPGPLRTLLRL--- 207 (394)
T ss_pred --hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCcchhHHHHH---
Confidence 9999999999999999999999999999999999999988887777777666555 11100 00000000000
Q ss_pred HHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHH
Q 006710 303 AFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIP 382 (634)
Q Consensus 303 a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~ 382 (634)
+ ++.+.....+..+
T Consensus 208 -------------------------------------------------------------l-----~~p~v~~~l~~t~ 221 (394)
T COG2814 208 -------------------------------------------------------------L-----RRPGVLLGLLATF 221 (394)
T ss_pred -------------------------------------------------------------h-----cCchHHHHHHHHH
Confidence 0 0001111122222
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHH
Q 006710 383 ACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIG 462 (634)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G 462 (634)
+.....+..|++...++ .+..+++.. ..++......+..++...+.+++.||..++ .+...
T Consensus 222 l~~~g~F~~ftYi~P~L-~~v~g~s~~------~vs~~Ll~~Gv~~~~Gn~~gGrl~dr~~~~------------~l~~~ 282 (394)
T COG2814 222 LFMTGHFALYTYIRPFL-ESVAGFSVS------AVSLVLLAFGIAGFIGNLLGGRLADRGPRR------------ALIAA 282 (394)
T ss_pred HHHcchhhhHHhHHHHH-HHccCCCHh------HHHHHHHHHHHHHHHHHHHHhhhccccchh------------HHHHH
Confidence 33333344444443332 222222211 223344445566667777777777762222 24555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHH
Q 006710 463 LAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAY 542 (634)
Q Consensus 463 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~ 542 (634)
.++.++.++.+.+.. -+.+..+...++.+++........+.-..+.+ ++.++.++++
T Consensus 283 ~~l~a~~~l~l~~~~----------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl 339 (394)
T COG2814 283 LLLLALALLALTFTG----------------------ASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSL 339 (394)
T ss_pred HHHHHHHHHHHHHhc----------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHH
Confidence 566666666555443 13333344444455555555555555555533 4789999999
Q ss_pred HHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 006710 543 AALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYR 609 (634)
Q Consensus 543 ~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~ 609 (634)
+....++|..+|..+++.+.+..+ +....+..+++.++++++.+...++
T Consensus 340 ~~aa~nlgia~GA~lGG~v~~~~g------------------~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 340 NVAAFNLGIALGAALGGLVLDALG------------------YAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc------------------hHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999877432 3556777777777776666555443
No 23
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.94 E-value=5.2e-23 Score=221.82 Aligned_cols=354 Identities=12% Similarity=0.042 Sum_probs=227.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 006710 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (634)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~ 152 (634)
.+.+.+++..+....+.+.++ .+.+++|.|..+.++..+.+.++..++.++.|+++||+ ||||++.++.++..++.++
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~ 94 (406)
T PRK15402 17 CLVLFEFATYIANDMIQPGML-AVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLA 94 (406)
T ss_pred HHHHHHHHHHhhhhhHhcchH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHH
Confidence 333334443444444444444 35678999999999999999999999999999999998 9999999999988888888
Q ss_pred HHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHH
Q 006710 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (634)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 232 (634)
+..+ .+.+.+++.|+++|++.+...+...+++.|.+|+++ |.+.++
T Consensus 95 ~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~ 140 (406)
T PRK15402 95 ILLA----------------------------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITA 140 (406)
T ss_pred HHHH----------------------------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHH
Confidence 7775 567888999999999999988999999999999988 899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhccccc
Q 006710 233 FFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFS 312 (634)
Q Consensus 233 ~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p 312 (634)
+.+....+|..++|.+++++.+..+|++.|++.++..++..+..+...++.+.+++++.+..
T Consensus 141 ~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 202 (406)
T PRK15402 141 LMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLK------------------ 202 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHH------------------
Confidence 98888888999999999999888899999988777766655544333222111000000000
Q ss_pred ccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHH
Q 006710 313 SSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVIL 392 (634)
Q Consensus 313 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~ 392 (634)
+..+..... ..+++.....+...+...... .+
T Consensus 203 -----------------------------~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~-~~ 234 (406)
T PRK15402 203 -----------------------------ELGRDYKLV------------------LKNRRFVAGALALGLVSLPLL-AW 234 (406)
T ss_pred -----------------------------HHHHHHHHH------------------HcCcHHHHHHHHHHHHHHHHH-HH
Confidence 000000000 001111111111111111111 11
Q ss_pred HhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 006710 393 TEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIW 472 (634)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~ 472 (634)
......+..+..+.+. ...+.......+..++..++.+++.||+.+| +.+.++.++.+++++.
T Consensus 235 ~~~~p~~~~~~~g~~~------~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~-----------~~~~~~~~~~~~g~~~ 297 (406)
T PRK15402 235 IALSPVILISGEQLSS------YEYGLLQVPVFGALIAGNLTLARLTSRRPLR-----------SLIRMGLWPMVAGLLL 297 (406)
T ss_pred HHHhHHHHHHHhCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----------HHHHHHHHHHHHHHHH
Confidence 1111112111111111 1112222222334445566666666665554 3366777777777666
Q ss_pred HHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHH
Q 006710 473 AGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCF 552 (634)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~ 552 (634)
+...... . + .+.++++...++.++|++...+..+...... +++.+|+..+++++.+.++..
T Consensus 298 ~~~~~~~----------------~-~-~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~ 358 (406)
T PRK15402 298 AALATVI----------------S-S-HAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFT 358 (406)
T ss_pred HHHHHHc----------------c-c-ccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHH
Confidence 5543211 0 0 2456677778889999998888877766544 458999999999999999999
Q ss_pred HHHHHHHHhhcc
Q 006710 553 AASILNSIIKSV 564 (634)
Q Consensus 553 lg~~l~~~v~~~ 564 (634)
+|+.+.+.+.+.
T Consensus 359 ~g~~~~~~l~~~ 370 (406)
T PRK15402 359 VGIELSKHAYLG 370 (406)
T ss_pred HHHHHHHhcccC
Confidence 999999887653
No 24
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.94 E-value=3.2e-23 Score=218.94 Aligned_cols=358 Identities=14% Similarity=0.017 Sum_probs=234.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 006710 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (634)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~ 153 (634)
++...++..++.......++.|.. +++.+..+.+++.+.+.++..++.++.|+++||+ |||++++.+.++..++..++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 445566666666556666676665 5899999999999999999999999999999998 99999999999888877777
Q ss_pred HHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHH
Q 006710 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (634)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 233 (634)
.+.... +. .+.+.++++|+++|++.+...+...++++|++|+++ |++.+++
T Consensus 82 ~~~~~~----~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 132 (365)
T TIGR00900 82 PFVALL----GG-------------------LNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSL 132 (365)
T ss_pred HHHHHc----CC-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhH
Confidence 665210 00 277889999999999999999999999999999988 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccc
Q 006710 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSS 313 (634)
Q Consensus 234 ~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~ 313 (634)
++.+.++|..++|.+++++.+..+|++.|++.++..++..+..+..+.+...+++ .++.+
T Consensus 133 ~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------------- 192 (365)
T TIGR00900 133 SQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASE-IQALS------------------- 192 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCcc-ccccc-------------------
Confidence 9999999999999999999988999999988776655554443332211110000 00000
Q ss_pred cccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhH-HHHHHHHHHHH
Q 006710 314 SELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPI-PACTIMLNVIL 392 (634)
Q Consensus 314 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~-~~~~~~~~~~~ 392 (634)
.+ ...+..+ .++ ...+.+.+...... ++....+....
T Consensus 193 -----------------------~~---~~~~~~~-----------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (365)
T TIGR00900 193 -----------------------NA---VLRDTRE-----------GIK-----FVLKNPLLRTLLLLALLFNLVFAPAI 230 (365)
T ss_pred -----------------------hh---HHHHHHh-----------HHH-----HHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000000 000 00000111111111 11111111111
Q ss_pred HhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 006710 393 TEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIW 472 (634)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~ 472 (634)
......+..+..+.+. ...+.+.....+..++..++.+++.|+..|| +.+..+.++.+++++.
T Consensus 231 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~ 293 (365)
T TIGR00900 231 VALFPYVQSKYLGRGS------THYGWVLAAFGLGALLGALLLGLLGRYFKRM-----------ALMTGAIFVIGLAILV 293 (365)
T ss_pred HHHhHHHHHHHhCCch------HHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----------HHHHHHHHHHHHHHHH
Confidence 1111222221112211 1123333444455556666666665555443 3345555555555554
Q ss_pred HHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHH
Q 006710 473 AGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCF 552 (634)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~ 552 (634)
..... .+.+.+.+..++.|++.+...+...++..+..|++.|++++|+.+....++..
T Consensus 294 ~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (365)
T TIGR00900 294 VGLTP----------------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWP 351 (365)
T ss_pred HHhhc----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 44321 02455566778889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhc
Q 006710 553 AASILNSIIKS 563 (634)
Q Consensus 553 lg~~l~~~v~~ 563 (634)
+++.+.+.+.+
T Consensus 352 ~g~~~~g~l~~ 362 (365)
T TIGR00900 352 LGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHH
Confidence 99999987765
No 25
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.94 E-value=2.4e-23 Score=221.76 Aligned_cols=383 Identities=16% Similarity=0.094 Sum_probs=235.8
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCccc
Q 006710 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (634)
Q Consensus 91 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (634)
....++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++..+++++
T Consensus 15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~-------------- 79 (399)
T TIGR00893 15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFA-------------- 79 (399)
T ss_pred HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHH--------------
Confidence 344568889999999999999999999999999999999998 99999999999999888888876
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 006710 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (634)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~ 250 (634)
.+.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++++...++|..++|.+++
T Consensus 80 --------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~ 139 (399)
T TIGR00893 80 --------------GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVG 139 (399)
T ss_pred --------------cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHH
Confidence 578899999999999999999999999999999988 999999999999999999999999
Q ss_pred HHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCCccccC
Q 006710 251 YIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIK 330 (634)
Q Consensus 251 ~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~ 330 (634)
++.+..+|++.|++.++..++..+..+...++.+.++....+.. +.. ..+....+.
T Consensus 140 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~---------~~~~~~~~~--- 195 (399)
T TIGR00893 140 WILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEE------------KYI---------VVGGLLAEQ--- 195 (399)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHH------------Hhh---------cchhhcccc---
Confidence 99888999999998877665555444433332211111000000 000 000000000
Q ss_pred CCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHHHhhhhHHHHHHhhcccCC
Q 006710 331 GSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHM 410 (634)
Q Consensus 331 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (634)
.+ .. .....+... .+....+++.............+..+....+.+..+..+.+
T Consensus 196 -------~~-------------~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 249 (399)
T TIGR00893 196 -------QG-------------KG-PSTPKKYQI--KELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLS--- 249 (399)
T ss_pred -------cc-------------cc-ccCCCccch--HHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccc---
Confidence 00 00 000000000 00001112221111111111111111112222222222222
Q ss_pred CCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcc
Q 006710 411 GKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYE 490 (634)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (634)
....+.+.....+..++..++.+++.||+.||... +........++.+.........
T Consensus 250 ---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~---------- 306 (399)
T TIGR00893 250 ---ILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKS----------LVFARKTAIIAGLVLSLLMFAT---------- 306 (399)
T ss_pred ---HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc----------hhHHHHHHHHHHHHHHHHHHHh----------
Confidence 11234445556666778888899999998887311 1111111111111111000000
Q ss_pred ccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCC
Q 006710 491 FSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKK 570 (634)
Q Consensus 491 ~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~ 570 (634)
... .+.+..+....+.+.+.+ ..+...++..+..|++.|++++|+.+...++|+.+++.+.+.+.+..+
T Consensus 307 -----~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g---- 375 (399)
T TIGR00893 307 -----NYV-NIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG---- 375 (399)
T ss_pred -----ccc-hhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC----
Confidence 000 122233333333333333 788999999999999999999999999999999999999998765322
Q ss_pred CCCCccccCCccchhhHHHHHHHHHHHHHHHHHHH
Q 006710 571 GQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLY 605 (634)
Q Consensus 571 ~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~ 605 (634)
++...|++.+++.+++.+..++
T Consensus 376 -------------~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 376 -------------SFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred -------------chhHHHHHHHHHHHHHHHHHHH
Confidence 1345677777766666555543
No 26
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=2.1e-24 Score=230.00 Aligned_cols=401 Identities=14% Similarity=0.071 Sum_probs=266.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhH
Q 006710 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM 187 (634)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (634)
+.++++|.++.+++..+.|+++||+ |||..++++.++.+++.++..++... ...
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~-------------------------~~~ 116 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA-------------------------PSF 116 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh-------------------------hhH
Confidence 6788899999999999999999998 99999999999988888877776321 567
Q ss_pred HHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH--HHhhccchHHHHHHH
Q 006710 188 LYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV--YIQMEHGWGSAFGAL 265 (634)
Q Consensus 188 ~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~--~l~~~~gw~~~f~~~ 265 (634)
.+++++|++.|+..|......+.++.|..|.+- ||..-.+...+.++|..++..++. .+.....|++.+.+.
T Consensus 117 e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~ 190 (485)
T KOG0569|consen 117 EMLILGRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFP 190 (485)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHH
Confidence 899999999999999999999999999999999 999999999999999999966552 233455699998888
Q ss_pred HHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccc-cCCCccccCCCcccccCCcchH-
Q 006710 266 AIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYE-VPGKHSAIKGSGKIAHTDDFRC- 343 (634)
Q Consensus 266 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~- 343 (634)
.+..++.+++..+ +||||+| ++. ++++++|.+..+..+..++++-
T Consensus 191 ~i~~~~~l~~l~~--------------------------------~PESPk~-Ll~~k~~~~~A~~sl~~y~G~~~~~~~ 237 (485)
T KOG0569|consen 191 LIPALLQLALLPF--------------------------------LPESPKY-LLIKKGDEEEARKALKFYRGKEDVEAE 237 (485)
T ss_pred HHHHHHHHHHHhc--------------------------------CCCCcch-HHHHcCCHHHHHHHHHHHhCCCcchhH
Confidence 8877766666544 6889998 655 6677776666555544433221
Q ss_pred HHHH-HhhhccccC--CCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccc
Q 006710 344 LDKA-ALELKEDVI--NPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCM 420 (634)
Q Consensus 344 ~~~a-~~~~~~~~~--~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (634)
.+.. .....++.. +...+++..+.+ ..|+.+...+.+.+++..........++..+....++... .+...
T Consensus 238 ~e~~~~e~~~~~~~~~~~~sl~~~~~~~-~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~------~a~~a 310 (485)
T KOG0569|consen 238 IEEMLREIEEEELEKKKQISLRQLLKNP-TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPE------EAQYA 310 (485)
T ss_pred HHHHHHHHHHhccccccCCcHHHHhcCc-chhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHH------HHHHH
Confidence 1111 111111111 112221111111 1222232333333333333222222223333322222211 12233
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcc
Q 006710 421 PVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDL 500 (634)
Q Consensus 421 ~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (634)
+.....+.++...+..+++||++||.. +.++..++.++.+++........... +-+
T Consensus 311 n~~~g~v~~~~t~~~~~lid~~gRRpL-----------ll~~~~~~~~~~~~~~~~~~l~~~~~-------------~~~ 366 (485)
T KOG0569|consen 311 NLGIGIVNLLSTLVSPFLIDRLGRRPL-----------LLISLSLMAVALLLMSIALFLSNSFG-------------SWL 366 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcHH-----------HHHHHHHHHHHHHHHHHHHHHHHHhh-------------hHH
Confidence 344455556666777789999998843 66677666666655554432210000 001
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCC
Q 006710 501 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNI 580 (634)
Q Consensus 501 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~ 580 (634)
++..++..+++...-.....|..+-+..|.+|++.|+.++++..+.+++.+++.....+.+.+..|
T Consensus 367 ~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g-------------- 432 (485)
T KOG0569|consen 367 SYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG-------------- 432 (485)
T ss_pred HHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------
Confidence 122223333333334445578889999999999999999999999999999999999999887655
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhhccceeccccCCCCchh
Q 006710 581 NTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYRSEQKHGNDYE 623 (634)
Q Consensus 581 ~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (634)
.++|+++++.+++..+..++..+|+|+|+.+|+.+..+
T Consensus 433 -----~~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~ 470 (485)
T KOG0569|consen 433 -----PYVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELE 470 (485)
T ss_pred -----chhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHH
Confidence 25788889999999999999999999998766554444
No 27
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.94 E-value=5.1e-26 Score=242.09 Aligned_cols=365 Identities=32% Similarity=0.455 Sum_probs=246.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhcc
Q 006710 136 YWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQ 215 (634)
Q Consensus 136 r~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~ 215 (634)
+|+++++.+++++|.+++.+++..+.... +.+...++++++++++|.|+.+|++.++++||
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~~~-------------------~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq 61 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSLPS-------------------GIQLGLFYIGLALIAVGTGGIKPNISPFGADQ 61 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC-------------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHC
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchhhh-------------------hHHHHHHHHHHHHHHhccccccccHHHHHHHH
Confidence 48999999999999999888765433311 14567899999999999999999999999999
Q ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccC-CCCCCcHH
Q 006710 216 FDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR-LPGGSPLT 294 (634)
Q Consensus 216 ~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~ 294 (634)
+++++ ...|.++++++|++.|+|+.+++.+.+++++++||.+.|.++.+.+++++++++..++.++.+ ++.+++..
T Consensus 62 ~~~~~---~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~ 138 (372)
T PF00854_consen 62 YDEDD---DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLT 138 (372)
T ss_dssp SSTTT---TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S
T ss_pred hcccc---hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccc
Confidence 99873 133999999999999999999999999999999999999999999999999999999998887 67777777
Q ss_pred H-HHHHHHHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCc-cccchhhhHH
Q 006710 295 R-VAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWK-LCTVTQVEEV 372 (634)
Q Consensus 295 ~-~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~ 372 (634)
+ ...+...+.+++....|....+ +........ ....... ..... +....... ...|. .++.+++++.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~--~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~ 207 (372)
T PF00854_consen 139 NFIKLVLVAAFKKRKLAVPKGSSW-LDWALFQYS----ERSIFGI--IVFIR-AAVIFFPE---IFFWALFCQVQRVEEL 207 (372)
T ss_dssp --SHHHHHHHHHHHCCCH-HHHHH-HHHHHHHHC----CCCCCCC--CCHHH-HHHHHCCC---HHHHTTTSSTTTHHHC
T ss_pred hhHHHHHHHHHHHhhcccccchHH-HHHhhhhhh----hhhhhhh--hhhcc-chhhhhhh---hhhcccCCccceeeee
Confidence 6 4555566666665544433222 111100000 0000000 00000 00000000 00011 1234456677
Q ss_pred HHHHhHhhHHHHHHHHHHHHHhhhhHHHHHHhhcccCCCC-ccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCC
Q 006710 373 KTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGK-LKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPR 451 (634)
Q Consensus 373 k~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~ 451 (634)
|.+.+.++.+.+.+.++....+...+...+...++..+++ +.+++.+++++|.+.++++.|+.+++++|+.|+. .
T Consensus 208 k~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~~----~ 283 (372)
T PF00854_consen 208 KALIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRRG----I 283 (372)
T ss_dssp CHHHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT------
T ss_pred eeeeeccccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhhc----c
Confidence 7777888888778888888888877777877777777877 8999999999999999999999999999999832 3
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 006710 452 GASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEA 531 (634)
Q Consensus 452 ~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~ 531 (634)
..+...++.+|++++.+++++...++..|.....+.+. .+.+|.++.+++..++|.+..+...+..++.+
T Consensus 284 ~~~~~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~~----------~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a 353 (372)
T PF00854_consen 284 QPSPPQKFGIGMVFAILAMFVAAIVEIRRLCYAQPCGK----------VSPWWQVPMYIFWLIPEYFLSGTGESAAYEFA 353 (372)
T ss_dssp ----HHHHHHH-HHHHHHHHTTTHHHH---HH----TT------------THHHHHHHHHHHHHHHTTTTHHHHHHHHHT
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHhhhhhcccccCC----------CChhhHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 48899999999999999999988888766655555442 34578889999999999999999999888888
Q ss_pred chhhHHHHHHHHHHHh
Q 006710 532 PDAMKSIGSAYAALAG 547 (634)
Q Consensus 532 P~~~rg~~~g~~~~~~ 547 (634)
|++..+.++|++....
T Consensus 354 ~~~~p~~m~~~~~~~~ 369 (372)
T PF00854_consen 354 PSRAPSSMMGIWFALS 369 (372)
T ss_dssp TTT-SSSSTHHHHHHH
T ss_pred HHhhhHHHHHHHHHHh
Confidence 8887777777777654
No 28
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.94 E-value=7.2e-23 Score=220.50 Aligned_cols=380 Identities=12% Similarity=0.050 Sum_probs=246.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH-----HHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD-----SSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~-----~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
.........++..+++....+.++.|++ ++|.+..+ .+++.+.+.++..++.++.|+++||+ |||+++..+.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 92 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHH
Confidence 3555566777777887777788888875 58888654 48888999999999999999999998 99999999998
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
+..++.+++... .+.+.+++.|++.|++.+ ..+...+++.|.+|+++
T Consensus 93 ~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~---- 139 (408)
T PRK09874 93 GMGIVMVLMGLA----------------------------QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNK---- 139 (408)
T ss_pred HHHHHHHHHHHH----------------------------hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh----
Confidence 888887777665 567889999999999865 46777888999999888
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHH
Q 006710 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAF 304 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~ 304 (634)
|++..++++.+.++|..++|.+++++.+..+|++.|++..+..++..+..+...++.....++++.
T Consensus 140 --~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 205 (408)
T PRK09874 140 --SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEM------------ 205 (408)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhh------------
Confidence 999999999999999999999999998888999999988776655554443332221100000000
Q ss_pred hhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHH
Q 006710 305 RKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPAC 384 (634)
Q Consensus 305 ~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~ 384 (634)
.+..+... . . ++.+.....+..
T Consensus 206 ------------------------------------~~~~~~~~---~-----------~-----~~~~~~~~~~~~--- 227 (408)
T PRK09874 206 ------------------------------------LHMREVVT---S-----------L-----KNPKLVLSLFVT--- 227 (408)
T ss_pred ------------------------------------hHHHHHHH---h-----------C-----cCCchHHHHHHH---
Confidence 00000000 0 0 000111111111
Q ss_pred HHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHH
Q 006710 385 TIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLA 464 (634)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~ 464 (634)
...+..........+..+...............+.+..+..+..++..++.+++.||+.||. .+..+.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~-----------~~~~~~~ 296 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEK-----------ILITALI 296 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch-----------hHHHHHH
Confidence 11111111111111111111110000000000112223334455566777788888776662 2455555
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 006710 465 VSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAA 544 (634)
Q Consensus 465 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~ 544 (634)
+.+++++...... +.+.+.+..++.|++.+...+...+...+..|++.+|..+++++
T Consensus 297 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 353 (408)
T PRK09874 297 FSVLLLIPMSFVQ-----------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQ 353 (408)
T ss_pred HHHHHHHHHHHhc-----------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHH
Confidence 5555444333221 33444555677889999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 006710 545 LAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAY 608 (634)
Q Consensus 545 ~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~ 608 (634)
....+|..+|+.+.+.+.+..+ +...|++.+++.+++.+..++..+
T Consensus 354 ~~~~~g~~~gp~~~G~l~~~~g------------------~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 354 SFRDIGNVTGPLMGAAISANYG------------------FRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HHHHHHHHhhHHHHHHHHhhcc------------------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998765322 346788888877777766655443
No 29
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.93 E-value=2.6e-24 Score=235.65 Aligned_cols=413 Identities=15% Similarity=0.140 Sum_probs=235.0
Q ss_pred HHHHHHhCCC--------hhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 006710 94 TFMFYVMHKS--------FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPN 165 (634)
Q Consensus 94 ~yl~~~~~~s--------~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (634)
..+..+++++ ..+.+++.+.+.++..++.+++|+++||+ |||++++++.+++.++.+++.+...
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~------- 123 (481)
T TIGR00879 52 ALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF------- 123 (481)
T ss_pred hcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence 3444555555 89999999999999999999999999998 9999999999999998888866421
Q ss_pred CCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHH
Q 006710 166 QDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (634)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~ 245 (634)
..+.+.++++|+++|++.+...+...++++|.+|+++ |++.+++++.+.++|..++
T Consensus 124 ------------------~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~ 179 (481)
T TIGR00879 124 ------------------ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVA 179 (481)
T ss_pred ------------------ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHH
Confidence 0345688999999999999999999999999999999 9999999999999999999
Q ss_pred HHHH---HHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhccccccccccccccc
Q 006710 246 FTLV---VYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEV 322 (634)
Q Consensus 246 p~i~---~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~ 322 (634)
|.++ +.+.+..+||+.|++.++..++.++..++..+..+....++. .....+.. ++.. ..
T Consensus 180 ~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~----~~~~------------~~ 242 (481)
T TIGR00879 180 YGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGR-VEEARKSL----ARLR------------GT 242 (481)
T ss_pred HHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCC-hHHHHHHH----HHHh------------CC
Confidence 9988 666677899999999666555444443332221100000000 00000000 0000 00
Q ss_pred CCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHHHhhhh--HHH
Q 006710 323 PGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLT--LSV 400 (634)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~~--~~~ 400 (634)
++.+. . ..+..+..+....... ......|...........+...... .+.............. .+.
T Consensus 243 ~~~~~------~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 310 (481)
T TIGR00879 243 SGEDK------E--LLDELELIDIKRSIEK--RSVQPSWGSLFSSTRRIRRRLFLGV--VLQWFQQFTGINAIMYYSPTI 310 (481)
T ss_pred CCCcH------H--HHHHHHHHHHHHHHHH--hhccccHHHHHhcCchhHHHHHHHH--HHHHHHHHhCCeehHHHHHHH
Confidence 00000 0 0000000000000000 0000001110000000001111000 0000000000000001 111
Q ss_pred HHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 006710 401 QQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYR 480 (634)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~ 480 (634)
.+..+.+. .....+.....+..++..++.+++.||++||. .+.+++++++++++++.......
T Consensus 311 ~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 373 (481)
T TIGR00879 311 FENAGVST------DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRP-----------LLLIGAAGMAICLFVLGILGASF 373 (481)
T ss_pred HHHcCCCc------hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH-----------HHHHHHHHHHHHHHHHHHHhhcc
Confidence 11111111 11233444455566677778888888887763 25566666666666655322110
Q ss_pred HhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHH
Q 006710 481 RNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSI 560 (634)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~ 560 (634)
... ..+..+..+++...++.+.......+....+..+..|++.|+.++|+.+...++|+.+++.+.+.
T Consensus 374 -----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~ 441 (481)
T TIGR00879 374 -----VTG-------SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPT 441 (481)
T ss_pred -----cCC-------cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00001223333333333333333446667778999999999999999999999999999999987
Q ss_pred hhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhccceecc
Q 006710 561 IKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYRS 614 (634)
Q Consensus 561 v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~~~~ 614 (634)
+.+..+ | ...|+++++++++..++.+++.++.|+++
T Consensus 442 ~~~~~~--------~----------~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 477 (481)
T TIGR00879 442 MLESIG--------V----------GGVFIFFGGLNVLGLIFVYFFLPETKGRT 477 (481)
T ss_pred HHHhcC--------c----------cceehhHHHHHHHHHHHHheecccCCCCC
Confidence 765322 2 34577888888877777766666655443
No 30
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.93 E-value=3.4e-23 Score=223.59 Aligned_cols=180 Identities=15% Similarity=0.072 Sum_probs=152.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~ 145 (634)
.+|+.++.+.+..+++.+....+.. ....+++++|++.++.+++.+.+.++..++.++.|+++||+ |||+++..++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGF-AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHH-HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHH
Confidence 4677677776666666666654444 45589999999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
+.++.++++++ .+...++++|+++|++.+...|....++.|.+|+++
T Consensus 83 ~~~~~~~~~~~----------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~----- 129 (412)
T TIGR02332 83 WGIASTATMFA----------------------------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF----- 129 (412)
T ss_pred HHHHHHHHHHh----------------------------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH-----
Confidence 99999988886 577899999999999999999999999999999988
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhh------ccchHHHHHHHHHHHHHHHHHHHHhcc
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQM------EHGWGSAFGALAIAMGISNMLFFIGTP 281 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~------~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (634)
|++.+++++.+..+|..++|.+++++.+ ..|||+.|++.++..++..++.++..+
T Consensus 130 -rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~ 190 (412)
T TIGR02332 130 -RARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLD 190 (412)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999998864 368999999977665554444444333
No 31
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.93 E-value=3.5e-22 Score=214.36 Aligned_cols=175 Identities=13% Similarity=0.118 Sum_probs=151.5
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHH
Q 006710 63 SKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIF 142 (634)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~ 142 (634)
..|..|+.+..+.+..++.....|.....++. +.+++|+++++.++..+.+.++..++.++.|+++||+ |||+++.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~ 91 (394)
T PRK10213 14 ITRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILF 91 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHH
Confidence 34557777677766666666666655555554 5678999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcc
Q 006710 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (634)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~ 222 (634)
.++..++.+++.++ .+.+.+++.|+++|++.+...+...+++.|++|+++
T Consensus 92 ~~~~~~~~~~~~~~----------------------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~-- 141 (394)
T PRK10213 92 AVLLTLSCLLVSFA----------------------------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT-- 141 (394)
T ss_pred HHHHHHHHHHHHHH----------------------------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH--
Confidence 99999988888775 678999999999999999999999999999999998
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHH
Q 006710 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISN 273 (634)
Q Consensus 223 ~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~ 273 (634)
|+++.+++..+.++|..++|.+++++.+..||++.|++.++..++..
T Consensus 142 ----~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 142 ----VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998776554443
No 32
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.93 E-value=2.9e-23 Score=228.88 Aligned_cols=400 Identities=16% Similarity=0.118 Sum_probs=249.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
+..+.+..++..+....+. ....++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.+++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVN-VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 4445555555555554444 445567788999999999999999999999999999999998 99999999999999998
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
+++..+ .+...++++|+++|++.+...+...+++.|.+|+++ |+++
T Consensus 82 ~~~~~~----------------------------~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~ 127 (485)
T TIGR00711 82 LLCGVA----------------------------PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRA 127 (485)
T ss_pred HHHhCc----------------------------CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHH
Confidence 888776 578889999999999999999999999999999988 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhccc
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAA 310 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~ 310 (634)
+++++....+|..++|.+++++.++.+|++.|++.....++..+......++.++++. ++.+.....+.........
T Consensus 128 ~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~g~~l~~~~~~~~~- 204 (485)
T TIGR00711 128 MAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAAS--ENFDFLGLLLLSVGLGSLL- 204 (485)
T ss_pred HHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccccc--CCCcHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999998877665555554444433221111 1111111111000000000
Q ss_pred ccccccccccccCCCccccCCCcccccCCcchHHH------HHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHH
Q 006710 311 FSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLD------KAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPAC 384 (634)
Q Consensus 311 ~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~ 384 (634)
.. +.+.+ .+ ....+....... .......+. ....|.... +-..+++.....+..++.
T Consensus 205 ~~------~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 267 (485)
T TIGR00711 205 YG------LSEGP-ER-------GWFDSNEILILSITGLVAIIAFVVWEL-TDDNPLVDL--RLFKYRNFTIGCVYMSLL 267 (485)
T ss_pred HH------HhhCC-CC-------CCCCchHHHHHHHHHHHHHHHHHHHHH-cCCCCccCH--HHHcCCChHHHHHHHHHH
Confidence 00 00000 00 000000000000 000000000 001111100 000111111111111111
Q ss_pred HHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHH
Q 006710 385 TIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLA 464 (634)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~ 464 (634)
...++.... +...+.++..+.+. ...+.......+..++..++.+++.||+.+| +.+.+|.+
T Consensus 268 ~~~~~~~~~-~~p~~~~~~~g~s~------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----------~~~~~g~~ 329 (485)
T TIGR00711 268 GLGLYGSFY-LLPLYLQQVLGYTA------LQAGLHILPVGLAPMLSSPIAGRMGDKIDPR-----------KLVTIGLI 329 (485)
T ss_pred HHHHHHHHH-HHHHHHHHhcCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH-----------HHHHHHHH
Confidence 111111111 11222222122211 1233444555666777888888888877665 23666777
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 006710 465 VSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAA 544 (634)
Q Consensus 465 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~ 544 (634)
+.++++.++..... ++.+.+.++...++.|+|.++..++......+..|++.++.++|+.+
T Consensus 330 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 390 (485)
T TIGR00711 330 LYAVGFYWRAFTFT-------------------PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSN 390 (485)
T ss_pred HHHHHHHHHhccCC-------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHH
Confidence 77666655442110 11345556666788899999998888888899999999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhc
Q 006710 545 LAGGLGCFAASILNSIIKS 563 (634)
Q Consensus 545 ~~~~ig~~lg~~l~~~v~~ 563 (634)
+.+.+|+.+|+.+.+.+.+
T Consensus 391 ~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 391 FTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987754
No 33
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.93 E-value=5.1e-23 Score=220.90 Aligned_cols=175 Identities=13% Similarity=0.197 Sum_probs=152.3
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHH
Q 006710 63 SKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIF 142 (634)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~ 142 (634)
..+++|+.+....+..+...+..+.+... ...+.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~ 83 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALV-LAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTS 83 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHH
Confidence 34577888888888888888888665555 4567889999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcc
Q 006710 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (634)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~ 222 (634)
.++..++.+++.++ .+.+.+++.|++.|++.+...+...+++.|.+|+++
T Consensus 84 ~~~~~~~~~~~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~-- 133 (405)
T TIGR00891 84 IVLFSAGTLACGFA----------------------------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL-- 133 (405)
T ss_pred HHHHHHHHHHHHHh----------------------------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh--
Confidence 99988888888775 567889999999999999999999999999999988
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc--hHHHHHHHHHHHHHHH
Q 006710 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG--WGSAFGALAIAMGISN 273 (634)
Q Consensus 223 ~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~g--w~~~f~~~~~~~~i~~ 273 (634)
|++..++++.+..+|..+++.+++.+.+..+ |++.|++.++..++.+
T Consensus 134 ----~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 134 ----RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998887666 9999987665544433
No 34
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.93 E-value=1.3e-22 Score=220.12 Aligned_cols=168 Identities=16% Similarity=0.185 Sum_probs=146.7
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
+.+|+.+....+..+...+..+.. .++..++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~ 91 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIV 91 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence 345666666666666666666544 4455677889999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
+..++.+.+.++ .+.+.++++|+++|++.+...+....++.|.+|+++
T Consensus 92 ~~~~~~~~~~~~----------------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~---- 139 (426)
T PRK12307 92 AYSVGTGLSGLA----------------------------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL---- 139 (426)
T ss_pred HHHHHHHHHHHH----------------------------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH----
Confidence 999998888876 678899999999999999999999999999999998
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Q 006710 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~ 268 (634)
|+++.+++..+..+|..++|.+.+++.+..+|++.|++..+.
T Consensus 140 --r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 140 --KSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred --hhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 999999999999999999999999998889999999875543
No 35
>PRK09952 shikimate transporter; Provisional
Probab=99.93 E-value=3.1e-22 Score=217.81 Aligned_cols=396 Identities=13% Similarity=0.099 Sum_probs=227.8
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCChhHHHHHH-----HHHHHHHHHHHHHHHHHhhhccchhH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVM--HKSFADSSNAV-----NNFLGISQASSVLGGFLADAYLGRYW 137 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~--~~s~~~~~~~~-----~~~~~~~~~~~l~~G~lsDr~~GRr~ 137 (634)
.++|+.++...+..+++.+-...+....+.++.+++ +.++.+ +++. ++..++..++.++.|+++||+ |||+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~ 95 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKR 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHH
Confidence 344566666666777776666544444455666665 677663 4433 233344567788899999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCC
Q 006710 138 TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (634)
Q Consensus 138 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~ 217 (634)
+++++.+++.++.++++++..+.... -.....+++.|+++|++.|+..+....++.|.+|
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p 155 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLPSFSTIG--------------------WWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAP 155 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHH--------------------HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCC
Confidence 99999999999999988862110000 0112368889999999999999999999999999
Q ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh--------hccchHHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 006710 218 ERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPG 289 (634)
Q Consensus 218 ~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~--------~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~ 289 (634)
+++ |+...+....+..+|..++..+..++. ..+|||+.|++.++..++.+ +. ++.
T Consensus 156 ~~~------rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~---~l-~~~------- 218 (438)
T PRK09952 156 KNK------KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIAL---WV-RNG------- 218 (438)
T ss_pred CCC------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHH---HH-HHh-------
Confidence 998 999999888888899888877766654 25799999998766543322 11 111
Q ss_pred CCcHHHHHHHHHHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhh
Q 006710 290 GSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQV 369 (634)
Q Consensus 290 ~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 369 (634)
.||+|++ ....++.++ ..+ ..++. +.-.
T Consensus 219 ---------------------~~es~~~-~~~~~~~~~---------~~~------------------~~~~~---~~l~ 246 (438)
T PRK09952 219 ---------------------MEESAEF-EQQQHEQAA---------AKK------------------RIPVI---EALL 246 (438)
T ss_pred ---------------------CCCChhH-HHHHhhccc---------ccc------------------cCCHH---HHHH
Confidence 1111111 000000000 000 00000 0000
Q ss_pred hHHHHHHhHhhH-HHHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccC
Q 006710 370 EEVKTLVRLVPI-PACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITG 448 (634)
Q Consensus 370 ~~~k~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~ 448 (634)
++++........ +.....++....+.++ +..+..+++.. .......+.....++..++.+++.||++||+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~~~~g~s~~------~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~- 318 (438)
T PRK09952 247 RHPGAFLKIIALRLCELLTMYIVTAFALN-YSTQNLGLPRE------LFLNIGLLVGGLSCLTIPCFAWLADRFGRRRV- 318 (438)
T ss_pred HchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH-
Confidence 111111111111 1112222222222222 22222222211 00112223344456667788899998887732
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006710 449 HPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLY 528 (634)
Q Consensus 449 ~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~ 528 (634)
+..+.++..++.+.+...... . .+.+.++...++.+++.+...+..+.+..
T Consensus 319 ----------~~~~~~~~~~~~~~~~~~~~~------------------~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 369 (438)
T PRK09952 319 ----------YITGALIGTLSAFPFFMALEA------------------Q-SIFWIVFFSIMLANIAHDMVVCVQQPMFT 369 (438)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHc------------------C-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444433222221100 0 12333344455567777777888899999
Q ss_pred hhcchhhHHHHHHHHHHH-hHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHH
Q 006710 529 EEAPDAMKSIGSAYAALA-GGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFL 604 (634)
Q Consensus 529 ~~~P~~~rg~~~g~~~~~-~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~ 604 (634)
|.+|.+.|+.+.|+.+.. +.+++.++|.+.+.+.+.++ .+| ...+..++++.+++++..+
T Consensus 370 e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~------~~~----------~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 370 EMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG------GSW----------HSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC------CCc----------hHHHHHHHHHHHHHHHHHH
Confidence 999999999999996544 55899999999988766332 123 3345555566666555544
No 36
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.93 E-value=1.6e-22 Score=217.00 Aligned_cols=371 Identities=11% Similarity=0.021 Sum_probs=238.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 006710 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (634)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~ 153 (634)
..++.+..+..++.+.+.+| .+.+++|+|.++.+++.+.+.++..++.++.|+++||+ |||+++..+..++.++.+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~ 91 (393)
T PRK09705 14 LVLIGLNMRPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMR 91 (393)
T ss_pred HHHHHHHcchhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHH
Confidence 33333444444444554444 57789999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHH
Q 006710 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (634)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 233 (634)
+++ +++..++++|+++|++.+...+....++.|.+| ++ |++.+++
T Consensus 92 ~~a----------------------------~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~ 136 (393)
T PRK09705 92 ELY----------------------------PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGL 136 (393)
T ss_pred HHC----------------------------cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHH
Confidence 987 677889999999999999999999999999997 66 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc-chHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhccccc
Q 006710 234 FYLSVTVGAIVAFTLVVYIQMEH-GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFS 312 (634)
Q Consensus 234 ~~~~~~lg~~~~p~i~~~l~~~~-gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p 312 (634)
+..+.++|..+++.+++++.++. +||+.+.+.++..++.++.++...++ ++++++
T Consensus 137 ~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------------- 192 (393)
T PRK09705 137 WSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAR---EVASSH--------------------- 192 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcC---CCcccc---------------------
Confidence 99999999999999999988775 79988766554433333322221111 000000
Q ss_pred ccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHH
Q 006710 313 SSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVIL 392 (634)
Q Consensus 313 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~ 392 (634)
++.. .+.+.. .+.+.....+........++...
T Consensus 193 -~~~~-----------------------------------------~~~~~l-----~~~~~~~l~~~~~~~~~~~~~~~ 225 (393)
T PRK09705 193 -KTTT-----------------------------------------TPVRVV-----FTPRAWTLGVYFGLINGGYASLI 225 (393)
T ss_pred -CCCc-----------------------------------------CCcccc-----cCHhHHHHHHHHHHHHHHHHHHH
Confidence 0000 000000 01111111111112222222222
Q ss_pred HhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 006710 393 TEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIW 472 (634)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~ 472 (634)
.+.+.++ .+ .+.+.. ..+....+..+..++..++.+++.||..+| +.+.+++.+..+++..
T Consensus 226 ~~lp~~l-~~-~g~s~~------~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----------~~~~~~~~l~~~~~~~ 286 (393)
T PRK09705 226 AWLPAFY-IE-IGASAQ------YSGSLLALMTLGQAAGALLMPAMARHQDRR-----------KLLMLALVLQLVGFCG 286 (393)
T ss_pred HHHHHHH-HH-cCCChh------hhhHHHHHHHHHHHHHHHHHHHHHhhccch-----------HHHHHHHHHHHHHHHH
Confidence 2232222 22 222211 233344455556666666777666665544 3355566666665544
Q ss_pred HHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHHHhHHHH
Q 006710 473 AGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAP-DAMKSIGSAYAALAGGLGC 551 (634)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P-~~~rg~~~g~~~~~~~ig~ 551 (634)
+.... .+...+ ..++.+++.+...+.......+..+ ++.++...|+.+....++.
T Consensus 287 ~~~~~----------------------~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~ 342 (393)
T PRK09705 287 FIWLP----------------------LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIA 342 (393)
T ss_pred HHHcc----------------------chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 33222 111111 1234567777777777777777774 6789999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhcccee
Q 006710 552 FAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKY 612 (634)
Q Consensus 552 ~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~~ 612 (634)
.+++.+.+.+.+.++ + +...|.+.++..++.....+.+.++++.
T Consensus 343 ~~gp~~~G~l~~~~g-------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 343 GLAPWFSGVLRSISG-------N----------YLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHHHHHHHHhC-------C----------chHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999998887544 1 2345666666666666665666555543
No 37
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.93 E-value=3.1e-22 Score=217.55 Aligned_cols=176 Identities=16% Similarity=0.193 Sum_probs=131.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CChhHHHHHHHHHHHHHH---HHHHHHHHHhhhccchhHHHHH
Q 006710 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMH---KSFADSSNAVNNFLGISQ---ASSVLGGFLADAYLGRYWTIAI 141 (634)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~s~~~~~~~~~~~~~~~~---~~~l~~G~lsDr~~GRr~~i~~ 141 (634)
++.+....+..+++.+.+.. ...+..++.++++ .+..+.+.+...+..... ++.+++|+++||+ |||+++.+
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~ 98 (432)
T PRK10406 21 IWAIVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHH
Confidence 33444455556677666654 5566778888884 555554444444444444 8999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCc
Q 006710 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (634)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~ 221 (634)
+.+++.++.++++++..+.... ......+++.|+++|++.|+..+...++++|.+|+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~- 157 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIG--------------------TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR- 157 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHH--------------------HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc-
Confidence 9999999999888762110000 0234578899999999999999999999999999998
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh--------hccchHHHHHHHHHHHHH
Q 006710 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMGI 271 (634)
Q Consensus 222 ~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~--------~~~gw~~~f~~~~~~~~i 271 (634)
|++..++.+.+.+.|..+++.+...+. ..+|||+.|++.++..++
T Consensus 158 -----rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll 210 (432)
T PRK10406 158 -----KGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVV 210 (432)
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH
Confidence 999999988888888888887655543 257999999987665443
No 38
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=2.4e-22 Score=213.04 Aligned_cols=154 Identities=14% Similarity=0.106 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCc
Q 006710 89 SVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDN 168 (634)
Q Consensus 89 ~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (634)
.......+.+++|+|.++.+++.+.+.+++.++.++.|+++||+ |||+++..+......+.. +....
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~----------- 76 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP----------- 76 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh-----------
Confidence 34445567889999999999999999999999999999999998 999887655544444332 22210
Q ss_pred ccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 006710 169 CDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTL 248 (634)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i 248 (634)
.+...++++|+++|++.+. ........+|.+|+++ |++.+++.+.+..+|..+++++
T Consensus 77 ----------------~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~ 133 (368)
T TIGR00903 77 ----------------FNYEWLLACQLLAALGQPF-LLNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAA 133 (368)
T ss_pred ----------------ccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999999999986 4555666799999988 9999999999999999999999
Q ss_pred HHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 249 VVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 249 ~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
++++.+..|||+.|++.+++.++..++.+.
T Consensus 134 ~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 134 GLKIYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999866665555444443
No 39
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.93 E-value=7.9e-23 Score=223.55 Aligned_cols=156 Identities=11% Similarity=0.069 Sum_probs=125.4
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCccc
Q 006710 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (634)
Q Consensus 91 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (634)
....|+.++ |++..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..++.+.++++...
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~----------- 116 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWA----------- 116 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhcc-----------
Confidence 344577777 99999999999999999999999999999998 99999999999988888777764110
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHH-HHHHHH
Q 006710 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI-VAFTLV 249 (634)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~-~~p~i~ 249 (634)
..+...+++.|++.|++.+...+.....+.|++|+++ |++++++++.+.++|+. .+|+++
T Consensus 117 -------------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~l~~ 177 (452)
T PRK11273 117 -------------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGLPPLLFL 177 (452)
T ss_pred -------------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHHHhhhhHHHHHHH
Confidence 0356778889999999999988888889999999998 99999999999998875 455544
Q ss_pred HHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 250 VYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 250 ~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
..+....+||+.|++.++..++..++...
T Consensus 178 ~~~~~~~gw~~~f~i~~~~~~~~~~l~~~ 206 (452)
T PRK11273 178 LGMAWFNDWHAALYMPAFAAILVALFAFA 206 (452)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 34434458999999877665554443333
No 40
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.93 E-value=4.9e-23 Score=226.10 Aligned_cols=155 Identities=15% Similarity=0.073 Sum_probs=128.1
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCccccc
Q 006710 93 VTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRI 172 (634)
Q Consensus 93 ~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (634)
...+.+++|++.++.+++.+.+.+++.++.+++|+++||+ |||+++.++.++..++...++.....
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~------------- 117 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGS------------- 117 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 4567889999999999999999999999999999999998 99999999888877776665542100
Q ss_pred ccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 006710 173 SQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYI 252 (634)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l 252 (634)
...+...+++.|+++|++.+...|...++++|++|+++ |++.++++..+.++|..+++.+..++
T Consensus 118 ----------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~ 181 (467)
T PRK09556 118 ----------GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALWG 181 (467)
T ss_pred ----------ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHHH
Confidence 00578899999999999999999999999999999999 99999999999999999999888777
Q ss_pred hhcc---chHHHHHHHHHHHHHHHHHHH
Q 006710 253 QMEH---GWGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 253 ~~~~---gw~~~f~~~~~~~~i~~~~~~ 277 (634)
.+.. +|+..|.+.++..++..++.+
T Consensus 182 ~~~~~~~~~~~~f~~~g~~~~~~~i~~~ 209 (467)
T PRK09556 182 ANYFFDGHVIGMFIFPSIIALIIGFIGL 209 (467)
T ss_pred HHhhccCcchhHHHHHHHHHHHHHHHHH
Confidence 6543 588888776665544433333
No 41
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.93 E-value=3.5e-22 Score=212.45 Aligned_cols=365 Identities=12% Similarity=0.057 Sum_probs=230.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH-HHHHHHHHHHHHH
Q 006710 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAI-FTTIYLAGLTGIT 154 (634)
Q Consensus 76 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~-~~~~~~~~~~~~~ 154 (634)
+..++..++.....+.++.|+++++|.|.++.+++.+.+.+...+..++.|+++||+ ||||.+++ +.++..++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHH
Confidence 456777788888888899999999999999999999999999999999999999998 99887655 4454455556666
Q ss_pred HhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH--HH
Q 006710 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF--FN 232 (634)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~--~~ 232 (634)
.+ .+.+.+++.|+++|.+.+...|...++..|..|++. |... .+
T Consensus 83 ~~----------------------------~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~ 128 (375)
T TIGR00899 83 WN----------------------------RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSS 128 (375)
T ss_pred hc----------------------------chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHH
Confidence 54 567778888888888888888888888889887665 5544 56
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhccccc
Q 006710 233 FFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFS 312 (634)
Q Consensus 233 ~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p 312 (634)
+.+.+.++|..++|.+++++.+..+|++.|++.++..++..+..+...++.++++++..
T Consensus 129 ~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 187 (375)
T TIGR00899 129 VMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL--------------------- 187 (375)
T ss_pred HHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCccccc---------------------
Confidence 77778899999999999999988999999999887665555544333332111000000
Q ss_pred ccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHH
Q 006710 313 SSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVIL 392 (634)
Q Consensus 313 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~ 392 (634)
.+.+..+ .+ . ..+.+.+. ...++....... +
T Consensus 188 --------------------------~~~~~~~--------------~~---~---~~~~~~~~--~~~~~~~~~~~~-~ 218 (375)
T TIGR00899 188 --------------------------TRLEVRG--------------LL---A---SRDTRLLF--VACTLMWGCNIL-Y 218 (375)
T ss_pred --------------------------Ccchhhh--------------hh---c---CcchHHHH--HHHHHHHHHHHH-H
Confidence 0000000 00 0 00111111 101111111111 1
Q ss_pred HhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 006710 393 TEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIW 472 (634)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~ 472 (634)
......+..+..+.+.. ..+.+.....+..++..++.+++.||+.+|. .+.++.++..+.+..
T Consensus 219 ~~~~~~~~~~~~g~~~~------~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~-----------~~~~~~~~~~~~~~~ 281 (375)
T TIGR00899 219 IINMPLLIIHELGLPDK------LAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR-----------LMLLAALAGVAFYTG 281 (375)
T ss_pred HhhhHHHHHHHcCCCHH------HHHHHHHHHHHHHHHHHHhHHHHHHHhcchh-----------HHHHHHHHHHHHHHH
Confidence 11112222222222211 1122223333444555667778877776652 244444444333332
Q ss_pred HHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHH
Q 006710 473 AGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCF 552 (634)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~ 552 (634)
..... +.+.++...++.+++.+...+....+..+..|++ ++.++++.+...++|..
T Consensus 282 ~~~~~-----------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~ 337 (375)
T TIGR00899 282 LAADN-----------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWI 337 (375)
T ss_pred HHHHH-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHH
Confidence 22211 3344445566678888888888888888888865 57999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHH
Q 006710 553 AASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFL 604 (634)
Q Consensus 553 lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~ 604 (634)
+++.+.+.+.+..+ ++..|++.+++.+++.++..
T Consensus 338 ~g~~~~g~~~~~~g------------------~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 338 IAGSVGGILAERWS------------------YHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHhcc------------------chhHHHHHHHHHHHHHHHHh
Confidence 99999998766332 24567777777666666543
No 42
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.93 E-value=1.4e-22 Score=221.52 Aligned_cols=352 Identities=11% Similarity=0.023 Sum_probs=214.7
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCccccc
Q 006710 93 VTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRI 172 (634)
Q Consensus 93 ~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (634)
...+.+++|.+.++.+++.+.+.++..++.+++|+++||+ |||++++.+.++..++.++++++
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~---------------- 104 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFS---------------- 104 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHh----------------
Confidence 3456789999999999999999999999999999999998 99999999999998888888776
Q ss_pred ccccCCCCCccchhHHHHHH-HHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 006710 173 SQLLGSCEPAKSWQMLYLYT-VLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY 251 (634)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~ 251 (634)
.+.+.+++ .|++.|++.+...+...+++.+.++ ++ |++..++++.+..+|..++|.++++
T Consensus 105 ------------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~ 165 (455)
T TIGR00892 105 ------------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQY 165 (455)
T ss_pred ------------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHH
Confidence 45666654 4688999998776677788889885 56 9999999999999999999999999
Q ss_pred HhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCCccccCC
Q 006710 252 IQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKG 331 (634)
Q Consensus 252 l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~ 331 (634)
+.+.+|||+.|++.+++.++..+..++.++.......... +.. +..+.+. ..
T Consensus 166 l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------------------~~~-----~~~~~~~--~~ 217 (455)
T TIGR00892 166 LFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKS---------------------KSK-----EGLPPDG--ST 217 (455)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccc---------------------ccc-----ccCCCCC--cc
Confidence 9999999999999887766555444433322110000000 000 0000000 00
Q ss_pred CcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhh-HHHHHHHHHHHHHhhhhHHHHHHhhcccCC
Q 006710 332 SGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVP-IPACTIMLNVILTEFLTLSVQQAYTMNTHM 410 (634)
Q Consensus 332 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (634)
.+... ....+. ..++..+ +.-..+.+...+. .++....++........ +..+ .+.+
T Consensus 218 -~~~~~---~~~~~~-----------~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~-~~~~-~g~s--- 274 (455)
T TIGR00892 218 -KKLSK---KSTAEK-----------INRFLDF---SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVP-YAKD-KGVD--- 274 (455)
T ss_pred -ccccc---cchhhh-----------hhhhcch---HHhcCchHHHHHHHHHHHHHHccchHHHHHH-HHHH-cCCC---
Confidence 00000 000000 0000000 0000111111111 11111111111111111 1111 1111
Q ss_pred CCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcc
Q 006710 411 GKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYE 490 (634)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (634)
....+.+..+..+..++..++.+++.|+...+ ..+...+.+++++.++++++....
T Consensus 275 ---~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~-------~~~~~~~~~~~~~~~l~~ll~~~~-------------- 330 (455)
T TIGR00892 275 ---EYEAAFLLSIIGFVDIFARPSCGLIAGLKWIR-------PHVQYLFSFALLFNGLTHLLCALA-------------- 330 (455)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHhcccccC-------HHHHHHHHHHHHHHHHHHHHHHHh--------------
Confidence 11223344445555666677777777642111 111122333333333333332221
Q ss_pred ccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcc
Q 006710 491 FSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSV 564 (634)
Q Consensus 491 ~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~ 564 (634)
.+.+++++..++.|++.+...+...+.+.+.+|++.++.++|+.++..++|+.+|+.+.+.+.+.
T Consensus 331 ---------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~ 395 (455)
T TIGR00892 331 ---------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA 395 (455)
T ss_pred ---------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehh
Confidence 13455566677788999899999999999999999999999999999999999999999877653
No 43
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.93 E-value=9.8e-23 Score=216.06 Aligned_cols=355 Identities=11% Similarity=-0.007 Sum_probs=227.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 006710 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (634)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~ 147 (634)
|+.+.......+.. ...|.. ..+..++.+++|+|.++.+++.+.+.++..++.++.|+++||+ |||+++.++.++..
T Consensus 3 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~ 79 (377)
T TIGR00890 3 WYVLVGTVIMCFTS-GYVYTW-TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYG 79 (377)
T ss_pred EEEeHHHHHHHHHh-hHHhhh-hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHH
Confidence 44333333333333 224443 3456778889999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
++.++++++ .+.+.++++|++.|++.+...+.....+.+.+| ++ |
T Consensus 80 ~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~ 124 (377)
T TIGR00890 80 LGFTFYAIA----------------------------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------R 124 (377)
T ss_pred HHHHHHHHH----------------------------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------c
Confidence 999888887 678899999999999999888888888888886 45 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhh
Q 006710 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKR 307 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~ 307 (634)
++..+++..+.++|..+++.+.+.+.+..+||+.|++.++..++..+..+...++.++++..++
T Consensus 125 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 188 (377)
T TIGR00890 125 GLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTN---------------- 188 (377)
T ss_pred HHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccC----------------
Confidence 9999999999999988777677777777899999998887665555444333221110000000
Q ss_pred cccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHH
Q 006710 308 HAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIM 387 (634)
Q Consensus 308 ~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~ 387 (634)
.+ . ..++.+.. + . ..+++ ........+....
T Consensus 189 -----------------~~--------~-~~~~~~~~---~---------------~----~~~~~-~~~~~~~~~~~~~ 219 (377)
T TIGR00890 189 -----------------IE--------V-SVKDYTVW---E---------------M----LRTPQ-FWVLYLSFFLNAV 219 (377)
T ss_pred -----------------cc--------c-chhhhhHH---H---------------H----HcCcc-HHHHHHHHHHHhH
Confidence 00 0 00000000 0 0 00011 1111111111111
Q ss_pred HHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHH
Q 006710 388 LNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSI 467 (634)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~ 467 (634)
...........+. +..+.+ ....+.+..+..+..++..++.+++.||+.||.. +.++.++.+
T Consensus 220 ~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-----------~~~~~~~~~ 281 (377)
T TIGR00890 220 SGLLLIGLYKPYG-QSLGLS------DGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKT-----------MSIVFGISA 281 (377)
T ss_pred HHHHHHHHHHHHH-HHcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-----------hhHHHHHHH
Confidence 1111111111111 111111 1112334455666677788888999998877632 555666666
Q ss_pred HHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHh
Q 006710 468 LSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAG 547 (634)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~ 547 (634)
++++....... .+...++...++.+++.+...+....+..+..|++.|+++.|+.+...
T Consensus 282 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 340 (377)
T TIGR00890 282 VGMAAMLFIPM---------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAK 340 (377)
T ss_pred HHHHHHHHccc---------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHH
Confidence 66554433220 112222233445566666666667788889999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcc
Q 006710 548 GLGCFAASILNSIIKSV 564 (634)
Q Consensus 548 ~ig~~lg~~l~~~v~~~ 564 (634)
.+|..+++.+.+.+.+.
T Consensus 341 ~~g~~~~~~~~g~l~~~ 357 (377)
T TIGR00890 341 AVAGIFGGLIASHALTE 357 (377)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999987653
No 44
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=2.4e-23 Score=231.01 Aligned_cols=403 Identities=14% Similarity=0.111 Sum_probs=260.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccch
Q 006710 106 DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSW 185 (634)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (634)
+.+++.+.+.++..++.++.|+++|++ |||++++++.+++.+|.++++++ .
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a----------------------------~ 140 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALA----------------------------P 140 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh----------------------------h
Confidence 448999999999999999999999998 99999999999999999999998 7
Q ss_pred hHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHH
Q 006710 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME-HGWGSAFGA 264 (634)
Q Consensus 186 ~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~-~gw~~~f~~ 264 (634)
+..+++++|+++|+|.|+.....+.+++|..|++. |+...+.++...++|..++..++....+. .+||..+++
T Consensus 141 ~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~ 214 (513)
T KOG0254|consen 141 SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGL 214 (513)
T ss_pred hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHH
Confidence 89999999999999999999999999999999999 99999999999999999995444444332 489988888
Q ss_pred HHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCCccccCCCccccc-CCc--c
Q 006710 265 LAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAH-TDD--F 341 (634)
Q Consensus 265 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~-~~~--~ 341 (634)
..+..++..+..++ .||+|+| +.+.++.+++.....++.. +++ .
T Consensus 215 ~~i~~~~~~~~~~~--------------------------------~pesp~~-L~~~g~~~~a~~~l~~l~g~~~~~~~ 261 (513)
T KOG0254|consen 215 ALIPAVILALGMLF--------------------------------LPESPRW-LIEKGRLEEAKRSLKRLRGLSPEDVE 261 (513)
T ss_pred HHHHHHHHHHHHHh--------------------------------CCCChHH-HHHcCChHHHHHHHHHHhCCCCcchH
Confidence 77766655555333 3455555 5554444444333322222 111 1
Q ss_pred hHHHHHH---hhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCc
Q 006710 342 RCLDKAA---LELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVT 418 (634)
Q Consensus 342 ~~~~~a~---~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (634)
...+... ........+...|+++.. ...+|+....+.+..++.........+++..+.+..+... +..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~-------~~~ 332 (513)
T KOG0254|consen 262 VELELLKIKLLVEAEVAEGKASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKS-------DTF 332 (513)
T ss_pred HHHHHHHHHHHHhhhcccccccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCC-------chH
Confidence 1111111 000000011112222222 1233444333333333333322222222222233222221 113
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCC
Q 006710 419 CMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMP 498 (634)
Q Consensus 419 ~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (634)
....+..+...+...+...++||++||. .+..|.+.+.+++++++............. .
T Consensus 333 ~~~~~~~~v~~~~t~~~~~lvd~~gRr~-----------lll~s~~~m~~~~~~~~~~~~~~~~~~~~~----------~ 391 (513)
T KOG0254|consen 333 LASIILGVVNFLGTLVATYLVDRFGRRK-----------LLLFGAAGMSICLVILAVVGVFALYYPNSS----------K 391 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHH-----------HHHHhHHHHHHHHHHHHHHHHHhccCCCcc----------c
Confidence 3344444555555556678889998884 378888888888887776553311000000 0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCcccc
Q 006710 499 DLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQ 578 (634)
Q Consensus 499 ~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~ 578 (634)
...++.++...++.........+..+.+..+.+|.+.|+.+.++....+++.+++-...........+
T Consensus 392 ~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~------------ 459 (513)
T KOG0254|consen 392 GAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG------------ 459 (513)
T ss_pred chhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc------------
Confidence 02344445555555555666677778899999999999999999999999999998777665544210
Q ss_pred CCccchhhHHHHHHHHHHHHHHH-HHHHhhccceeccccCCCCchhh
Q 006710 579 NINTGRFDYLYWLLAVLSVINFC-AFLYSAYRYKYRSEQKHGNDYEV 624 (634)
Q Consensus 579 ~~~~~~~~~~f~~~a~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~ 624 (634)
....|+.+++++.+... +++++.+++|+++.||+++.++.
T Consensus 460 ------~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~ 500 (513)
T KOG0254|consen 460 ------IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEE 500 (513)
T ss_pred ------ccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHc
Confidence 01346666666666666 78889999999998877665543
No 45
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.92 E-value=1e-21 Score=209.55 Aligned_cols=354 Identities=14% Similarity=0.061 Sum_probs=232.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 006710 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (634)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~ 146 (634)
+++.++.+.+..+...++.....+.+ .++.+++|.|.++.+++.+.+.++..++.++.|+++||+ |||+++..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAF-PEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 44555666666666666665555544 456788999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
.++.+++..+ .+.+.+++.|++.|++.+...+...+++.|.+|+++
T Consensus 81 ~~~~~~~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------ 126 (385)
T TIGR00710 81 ALSSLGLALS----------------------------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------ 126 (385)
T ss_pred HHHHHHHHHH----------------------------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------
Confidence 9888888776 567888999999999999999999999999999888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhh
Q 006710 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRK 306 (634)
Q Consensus 227 r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~ 306 (634)
|++.+++++....+|..++|.+++++.+..+|++.|++.++..++..+..+...++.+.++.+ +...
T Consensus 127 ~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------ 193 (385)
T TIGR00710 127 LSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEAR-IQIS------------ 193 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccc-CCHH------------
Confidence 999999999999999999999999999889999999887776655555444333321111000 0000
Q ss_pred hcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhH-HHHH
Q 006710 307 RHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPI-PACT 385 (634)
Q Consensus 307 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~-~~~~ 385 (634)
..+.+.. +....+++...... .+..
T Consensus 194 ----------------------------------~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~ 219 (385)
T TIGR00710 194 ----------------------------------TYFETFL--------------------LLLKSKMFWGYALIYGASF 219 (385)
T ss_pred ----------------------------------HHHHHHH--------------------HHHcCchhHHHHHHHHHHH
Confidence 0000000 00000111111111 1111
Q ss_pred HHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHH
Q 006710 386 IMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAV 465 (634)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l 465 (634)
..++. +......+..+..+.+.. ..+.+.....+..++..++.+++.||+.+| +.+..+.++
T Consensus 220 ~~~~~-~~~~~~~~~~~~~g~~~~------~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-----------~~~~~~~~~ 281 (385)
T TIGR00710 220 GGFFA-FFSGAPFVYIDIMGVSPS------VFGLLFALNIIAMIFGGFLNGRFIKKWGAK-----------SLLRMGLIL 281 (385)
T ss_pred HHHHH-HHHcChHHHHHHcCCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----------HHHHHHHHH
Confidence 11111 111112222222222211 223344445566677777888888777665 235556666
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHH
Q 006710 466 SILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAAL 545 (634)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 545 (634)
..++.+++...... . . .+...++...++.+++.+...+....+..+..| +.+++++++.+.
T Consensus 282 ~~~~~~~~~~~~~~----------------~-~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~ 342 (385)
T TIGR00710 282 FAVSAVLLEITAIL----------------G-L-GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGT 342 (385)
T ss_pred HHHHHHHHHHHHHh----------------c-c-chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHH
Confidence 66655544433211 0 0 123344555667888999999999999888887 679999999988
Q ss_pred HhHHHHHHHHHHHHH
Q 006710 546 AGGLGCFAASILNSI 560 (634)
Q Consensus 546 ~~~ig~~lg~~l~~~ 560 (634)
....++.+.+.+.+.
T Consensus 343 ~~~~~g~i~~~~~~~ 357 (385)
T TIGR00710 343 LRLVLGAIVGYLVSL 357 (385)
T ss_pred HHHHHHHHHHHHHHh
Confidence 877666565555553
No 46
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.92 E-value=5.3e-22 Score=212.18 Aligned_cols=172 Identities=13% Similarity=0.098 Sum_probs=150.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 006710 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (634)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~ 148 (634)
+.++...+..+...+..+...+.++ .+.+++|.+.++.++..+.+.++..++.++.|+++||+ |||+++.++.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLT-ELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChH-HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHH
Confidence 3466777777777777766666655 46778999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhh
Q 006710 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (634)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~ 228 (634)
+.++++++ .+.+.+++.|++.|++.+...+....++.|.+|+++ |+
T Consensus 81 ~~~l~~~~----------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~ 126 (382)
T PRK10091 81 GNAMFTLS----------------------------SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VT 126 (382)
T ss_pred HHHHHHHh----------------------------CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hh
Confidence 99888876 678999999999999999988888899999999888 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Q 006710 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (634)
Q Consensus 229 ~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (634)
+.++++..+..+|..++|.+++++.+..+||+.|++.++..++..+..
T Consensus 127 ~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 174 (382)
T PRK10091 127 AAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASI 174 (382)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988999999998877655554433
No 47
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.92 E-value=5.1e-22 Score=218.31 Aligned_cols=176 Identities=15% Similarity=0.075 Sum_probs=135.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~ 145 (634)
++++.+.......++..+..+.+... ..++.+++|++.++.+++.+.+.++..++.+++|+++||+ |||+++.++.++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~ 110 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAPL-LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLML 110 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 34555555555555555555554433 4467889999999999999999999999999999999998 999999999988
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
..++.++++++ .+...++++|+++|++.+...+ ...+++|.+|+++
T Consensus 111 ~~~~~~~~~~~----------------------------~s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~----- 156 (476)
T PLN00028 111 TAPAVFCMSLV----------------------------SSATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKI----- 156 (476)
T ss_pred HHHHHHHHHHh----------------------------cCHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhh-----
Confidence 88888777775 5677888899999999887544 5567899999998
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHh----h-----ccchHHHHHHHHHHHHHHHHHHHH
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQ----M-----EHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~----~-----~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
|++++++.+...++|..+++.+.+.+. + ..|||+.|++.+++.++..+..++
T Consensus 157 -rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 157 -VGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred -eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999988777777777766554432 2 248999999888766555444433
No 48
>PRK03699 putative transporter; Provisional
Probab=99.92 E-value=7.5e-22 Score=211.96 Aligned_cols=174 Identities=7% Similarity=0.047 Sum_probs=145.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~ 145 (634)
+|||..+...+..++.....+.+...++ .+.+++|+|.++.+++.+.+.++..++.+++|+++||+ |||+++.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMG-PIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 4667777777776666666555555544 46788999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
..++.+++.++ .+.+.+++.|+++|++.|...+...+++.|.+|+++
T Consensus 82 ~~i~~~l~~~~----------------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~----- 128 (394)
T PRK03699 82 MILAVAGLMFS----------------------------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ----- 128 (394)
T ss_pred HHHHHHHHHHc----------------------------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch-----
Confidence 88888888775 567888999999999999988999999999999888
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHHHHHHH
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIAMGISNML 275 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~-~~gw~~~f~~~~~~~~i~~~~ 275 (634)
|++.++..+....+|+.++|.+.+++.. ..+||+.|++.++..++..++
T Consensus 129 -r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 129 -RGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 9999998888888999999999888754 579999998877665544433
No 49
>TIGR00898 2A0119 cation transport protein.
Probab=99.92 E-value=2.3e-23 Score=231.18 Aligned_cols=387 Identities=11% Similarity=0.042 Sum_probs=234.1
Q ss_pred HHHHHhCCC---hhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccc
Q 006710 95 FMFYVMHKS---FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDR 171 (634)
Q Consensus 95 yl~~~~~~s---~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (634)
.+.+++|++ ..+.+++.+++.++..++.++.|+++||+ |||++++++.++..++.++++++
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~--------------- 177 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFS--------------- 177 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHc---------------
Confidence 466789998 89999999999999999999999999998 99999999999999888888776
Q ss_pred cccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 006710 172 ISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY 251 (634)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~ 251 (634)
.+.+.+++.|++.|++.++..+...+++.|.+|+++ |+...+++..+..+|..++|.++.+
T Consensus 178 -------------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~ 238 (505)
T TIGR00898 178 -------------PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYF 238 (505)
T ss_pred -------------ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999999999999999998 9999999988999999999988776
Q ss_pred HhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCCccccCC
Q 006710 252 IQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKG 331 (634)
Q Consensus 252 l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~ 331 (634)
+.+ ||+.|++.++..++..+..++..+..+....++ ...+..+.+....+......++. ...
T Consensus 239 ~~~---wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~-~~~~a~~~l~~~~~~~~~~~~~~----~~~---------- 300 (505)
T TIGR00898 239 IPD---WRWLQLAVSLPTFLFFLLSWFVPESPRWLISQG-RIEEALKILQRIAKINGKKLPAE----VLS---------- 300 (505)
T ss_pred hhH---HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCC-CHHHHHHHHHHHHHHcCCCCCHH----HHh----------
Confidence 654 999999887766655555433222111000111 11111111111111110000000 000
Q ss_pred CcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHHHhhhhHHHHHHhhcccCCC
Q 006710 332 SGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMG 411 (634)
Q Consensus 332 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (634)
....+.. ... .+...++...+ + +.+..... .....+..... .++.......
T Consensus 301 ------------~~~~~~~-~~~-~~~~~~~~l~~----~-~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~-- 351 (505)
T TIGR00898 301 ------------LSLEKDL-SSS-KKQYSFLDLFR----T-PNLRKTTL---CLMMLWFTTAF-----SYYGLVLDLG-- 351 (505)
T ss_pred ------------hhhhhhh-hhc-cCCCcHHHHhC----C-hHHHHHHH---HHHHHHHHHHH-----HHHHHhcccc--
Confidence 0000000 000 00001100000 0 11111110 01111111110 0010000000
Q ss_pred CccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccc
Q 006710 412 KLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEF 491 (634)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (634)
...........+..+..+....+..++.||++||. .+.+++++.+++++.+.....
T Consensus 352 ~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~-----------~~~~~~~~~~~~~l~~~~~~~------------- 407 (505)
T TIGR00898 352 NLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRY-----------TMAASLLLAGVALLLLLFVPV------------- 407 (505)
T ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHH-----------HHHHHHHHHHHHHHHHHHcCC-------------
Confidence 00111112223344445556666778888887763 356666666666655444320
Q ss_pred cccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCC
Q 006710 492 SFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKG 571 (634)
Q Consensus 492 ~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~ 571 (634)
...++.+...++.+++.....+..+.+..|.+|++.|+.++|+.+....+|+.+++.+.+ +....
T Consensus 408 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~------ 472 (505)
T TIGR00898 408 --------DLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKW------ 472 (505)
T ss_pred --------CchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHH------
Confidence 122344444556667777778888999999999999999999999999999999999888 33210
Q ss_pred CCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhccceecccc
Q 006710 572 QPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYRSEQ 616 (634)
Q Consensus 572 ~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~~~~~~ 616 (634)
....+++++++.+++.++.+ +.++++++.++
T Consensus 473 -------------~~~~~~~~~~~~~~~~~~~~-~lpet~~~~l~ 503 (505)
T TIGR00898 473 -------------LFLPLVLFGGLALLAGILTL-FLPETKGVPLP 503 (505)
T ss_pred -------------HhhHHHHHHHHHHHHHHHHH-cCcCCCCCCCC
Confidence 12345666666666655544 44676665544
No 50
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.92 E-value=4.3e-22 Score=208.74 Aligned_cols=347 Identities=20% Similarity=0.224 Sum_probs=260.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 006710 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (634)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~ 152 (634)
.+....+...+..+......+.|. +++|.+..+.+++.+.+.++..++.++.|+++||+ |||+.+.++.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHH
Confidence 445566777777777777777766 56799999999999999999999999999999998 9999999999999999888
Q ss_pred HHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHH
Q 006710 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (634)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 232 (634)
+.+. .+.+.++++|++.|++.+...+...+++.|.+|+++ |++.++
T Consensus 81 ~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 126 (352)
T cd06174 81 LAFA----------------------------SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALG 126 (352)
T ss_pred HHHh----------------------------ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhh
Confidence 8876 567889999999999999999999999999999988 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhccccc
Q 006710 233 FFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFS 312 (634)
Q Consensus 233 ~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p 312 (634)
+.+...++|..++|.+++++.+..+|++.|++..+..++..+......
T Consensus 127 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 174 (352)
T cd06174 127 LFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-------------------------------- 174 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--------------------------------
Confidence 999999999999999999999988999999988877666555443311
Q ss_pred ccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHH
Q 006710 313 SSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVIL 392 (634)
Q Consensus 313 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~ 392 (634)
|.+................+
T Consensus 175 ------------------------------------------------------------~~~~~~~~~~~~~~~~~~~~ 194 (352)
T cd06174 175 ------------------------------------------------------------RLLLLLALAFFLLSFGYYGL 194 (352)
T ss_pred ------------------------------------------------------------HHHHHHHHHHHHHHhHHHHH
Confidence 00001111111111111111
Q ss_pred HhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 006710 393 TEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIW 472 (634)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~ 472 (634)
......+..+..+.+ ....+.+.....+..++..++.+++.||..+|.. .+..+.++..++.+.
T Consensus 195 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~~~ 258 (352)
T cd06174 195 LTYLPLYLQEVLGLS------AAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRL----------LLLIGLLLAALGLLL 258 (352)
T ss_pred HHHHHHHHHHhcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH----------HHHHHHHHHHHHHHH
Confidence 111122222111111 1123445566677777888888888888777630 366777777777666
Q ss_pred HHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHH
Q 006710 473 AGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCF 552 (634)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~ 552 (634)
..... +.+.+.+..++.+++.+...+...++..+..|++.|++.+|+.+....++..
T Consensus 259 ~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (352)
T cd06174 259 LALAP-----------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGA 315 (352)
T ss_pred HHHhc-----------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Confidence 55432 3566677788899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHH
Q 006710 553 AASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFL 604 (634)
Q Consensus 553 lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~ 604 (634)
+++.+.+.+.+..+ | ...|++.+++.++..++.+
T Consensus 316 i~~~i~g~l~~~~~--------~----------~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 316 LGPLLAGLLLDTGG--------Y----------GGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHhcccC--------c----------chHHHHHHHHHHHHHHHhe
Confidence 99999998765221 2 3567777777766655543
No 51
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.92 E-value=9.8e-23 Score=214.25 Aligned_cols=351 Identities=20% Similarity=0.201 Sum_probs=228.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 006710 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGIT 154 (634)
Q Consensus 75 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~ 154 (634)
++..++..+........++.++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++..++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 3455666677766666666688999999999999999999999999999999999998 999999999999999855555
Q ss_pred HhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHH
Q 006710 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFF 234 (634)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 234 (634)
++ .+.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.
T Consensus 81 ~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~ 126 (352)
T PF07690_consen 81 FA----------------------------SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGIL 126 (352)
T ss_dssp HH----------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHH
T ss_pred hh----------------------------hhHHHHhhhccccccccccccccccccccccchhhh------hhhccccc
Confidence 54 345689999999999999999999999999999988 99999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhccccccc
Q 006710 235 YLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSS 314 (634)
Q Consensus 235 ~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~ 314 (634)
+.+.++|..++|.+++++.+..+|++.|++.++..++..++.....++.+.++++.++
T Consensus 127 ~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~---------------------- 184 (352)
T PF07690_consen 127 SAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESP---------------------- 184 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SS----------------------
T ss_pred cchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccc----------------------
Confidence 9999999999999999999888999999998888777766433332221111110000
Q ss_pred ccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHHHh
Q 006710 315 ELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTE 394 (634)
Q Consensus 315 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~~~ 394 (634)
.+ ++ ... ..+++.. .+...+.+.+...+...+.....+.....
T Consensus 185 ----------~~------------~~----~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (352)
T PF07690_consen 185 ----------KE------------SE----SKK----------PKPLKPG-FKSLFKNPVLWILLIAFFLFFFVFSGFSF 227 (352)
T ss_dssp ----------TT------------TT------H----------HHCCCH--CTHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------cc------------cc----ccc----------ccccccc-cccccccchhhhhhhhhhHHHHHHHHhhc
Confidence 00 00 000 0000000 00011111111111111111111111111
Q ss_pred hhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 006710 395 FLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAG 474 (634)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~ 474 (634)
....+..+..+.+ . ....+.+..+..+..++..++.+++.||+.+|. ...+......++.+.+.
T Consensus 228 ~~~~~l~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 291 (352)
T PF07690_consen 228 FLPLYLQEVLGFS-G----PSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR-----------RLLIAILLLILGALGLL 291 (352)
T ss_dssp HHHHHCCHHHHCC-T----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH-----------HHHHHHHHHHHHHHHHC
T ss_pred ccchhhhhccCCC-H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-----------HHHHHHHHHHHHHHHHH
Confidence 1111111222222 0 011223344455555666777888877766542 23333333333333322
Q ss_pred HHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHH
Q 006710 475 IFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAA 554 (634)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg 554 (634)
..... .+..+.....++.|++.+...+...+++.+.+|++.+|++.|+.+...+++..++
T Consensus 292 ~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~ig 351 (352)
T PF07690_consen 292 LLPFS--------------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIG 351 (352)
T ss_dssp CSHHH--------------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHh--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 22211 1345566677788999999999999999999999999999999999999999988
Q ss_pred H
Q 006710 555 S 555 (634)
Q Consensus 555 ~ 555 (634)
|
T Consensus 352 P 352 (352)
T PF07690_consen 352 P 352 (352)
T ss_dssp H
T ss_pred C
Confidence 6
No 52
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.92 E-value=3.4e-21 Score=206.79 Aligned_cols=173 Identities=12% Similarity=0.073 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhccchhHHHH-HHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLG-ISQASSVLGGFLADAYLGRYWTIA-IFTTIYL 147 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~l~~G~lsDr~~GRr~~i~-~~~~~~~ 147 (634)
..+......++..++...+.+.++.|+.+++|.|.++.+++.+.+.+ +..++++++|+ +||+ ||||.++ .+.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGV 93 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHH
Confidence 35666667888888888888999999999999999999999876655 55566666666 9998 9988755 4455444
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
++..+++++ .+.+.+++.+.+.+...+...|...++..|..++++ |
T Consensus 94 ~~~~~~~~~----------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 139 (393)
T PRK15011 94 LACTLFAWN----------------------------RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG------R 139 (393)
T ss_pred HHHHHHHHh----------------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc------c
Confidence 555555554 455665555544444445667888888888776654 4
Q ss_pred h--hHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 228 D--RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 228 ~--~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
. ...++.+.+.++|..++|.+++++.++.|||+.|++.++..++..+....
T Consensus 140 ~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 140 EAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 3 34467888999999999999999999899999999887765555444443
No 53
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.92 E-value=2.5e-21 Score=206.87 Aligned_cols=156 Identities=15% Similarity=0.154 Sum_probs=138.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 006710 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (634)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~ 147 (634)
.+.++.++...++..+....+.+.+|.|+. ++|.|..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 356788888888988888888888888776 6899999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
++...++++ .+.+.++++|+++|++.+...+...+.+.|..++++ |
T Consensus 83 ~~~~~~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~ 128 (381)
T PRK03633 83 AGCAGLGLM----------------------------VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------R 128 (381)
T ss_pred HHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------H
Confidence 888887776 578889999999999999998888888889988887 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccchH
Q 006710 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWG 259 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~ 259 (634)
++.+++++.+.++|..+||.+++++.+...|.
T Consensus 129 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 129 GRLLAAYMMVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccch
Confidence 99999999999999999999999987654333
No 54
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.92 E-value=4.8e-21 Score=206.82 Aligned_cols=148 Identities=15% Similarity=0.080 Sum_probs=132.8
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCccccccc
Q 006710 95 FMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQ 174 (634)
Q Consensus 95 yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (634)
.+.+++|.+.+++++.+++|.++..++.+++|+++||+ |||++++.+.+++.++.+++.++
T Consensus 41 ~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a------------------ 101 (413)
T PRK15403 41 NVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFT------------------ 101 (413)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHc------------------
Confidence 36789999999999999999999999999999999998 99999999999999998888876
Q ss_pred ccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 175 LLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (634)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~ 254 (634)
.+.+.++++|+++|++.+...+...+++.|.+|+++ |.+.+++++.+.++|..+||.+++++.+
T Consensus 102 ----------~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~ 165 (413)
T PRK15403 102 ----------TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMH 165 (413)
T ss_pred ----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999998777777888999999988 9999999999999999999999999988
Q ss_pred ccchHHHHHHHHHHHHHHHHHHH
Q 006710 255 EHGWGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 255 ~~gw~~~f~~~~~~~~i~~~~~~ 277 (634)
..||++.|++.++..++..+..+
T Consensus 166 ~~gw~~~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 166 FVHWKVLFAIIAVMGLIAFVGLL 188 (413)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHH
Confidence 88999999988877666555433
No 55
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.92 E-value=7.1e-22 Score=216.88 Aligned_cols=378 Identities=14% Similarity=0.085 Sum_probs=229.1
Q ss_pred HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCC
Q 006710 99 VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGS 178 (634)
Q Consensus 99 ~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (634)
+++++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.+++.++..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6889999999999999999999999999999998 9999999999988888777655411
Q ss_pred CCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc-c
Q 006710 179 CEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH-G 257 (634)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~-g 257 (634)
.+...+++.|+++|++.+...+....+++|.+|+++ |++.+++++.+.++|..++|.+++++.+.. +
T Consensus 129 ------~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~g 196 (465)
T TIGR00894 129 ------GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGG 196 (465)
T ss_pred ------cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 345678999999999999999999999999999999 999999999999999999999999998884 9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCCccccCCCccccc
Q 006710 258 WGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAH 337 (634)
Q Consensus 258 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~ 337 (634)
|++.|++.++..++..++++...++.+++.+..++. ..
T Consensus 197 w~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~----------------------------------------- 234 (465)
T TIGR00894 197 WPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKF-EK----------------------------------------- 234 (465)
T ss_pred CCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHH-HH-----------------------------------------
Confidence 999999988776555554444332211111100000 00
Q ss_pred CCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhh-HHHHHHHHHHHHHhhhhHHHHHHhhcccCCCCcccc
Q 006710 338 TDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVP-IPACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLP 416 (634)
Q Consensus 338 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (634)
+..+...........+..+|+.. ...+.+..... .+.....++....+.+. +..+..+.+.. .
T Consensus 235 ----~~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~lp~-~l~~~~g~s~~------~ 298 (465)
T TIGR00894 235 ----KYINSSLQGQKGSTRQSLPIKAI-----PKSLPVWAIWFAIFGHFWLYTILPTYLPT-FISWVLRVSGK------E 298 (465)
T ss_pred ----HHHHhhcccccCCCCCCCCHHHH-----hcCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCcChH------H
Confidence 00000000000000001112111 01111111111 11222222222222322 32332333321 2
Q ss_pred CccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCC
Q 006710 417 VTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTA 496 (634)
Q Consensus 417 ~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (634)
.+.+..+..+..++..++.+++.|++.+|...+ .....++..+..+...+...+.....
T Consensus 299 ~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 357 (465)
T TIGR00894 299 NGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLS---LTAARKIFNGIGGLGPGIFAYALPYL------------------ 357 (465)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHHHHHHHHHHHHHHc------------------
Confidence 344555667777888889999999987663321 11111222222211111111111110
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCcc
Q 006710 497 MPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWL 576 (634)
Q Consensus 497 ~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~ 576 (634)
. .+..+.+..+.+.+.+..+..+.......+..|. .+|.++|+.++...+++.+++.+.+.+.+... |
T Consensus 358 -~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~--------~- 425 (465)
T TIGR00894 358 -S-AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDS--------K- 425 (465)
T ss_pred -C-CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCC--------c-
Confidence 0 1233333344444445455555555566666765 89999999999999999999999886654211 1
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHHHHHHh
Q 006710 577 AQNINTGRFDYLYWLLAVLSVINFCAFLYS 606 (634)
Q Consensus 577 ~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~ 606 (634)
+.+...|++.+++.+++.+++.+.
T Consensus 426 ------~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 426 ------NVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHeeee
Confidence 123556777777777776665543
No 56
>PRK15075 citrate-proton symporter; Provisional
Probab=99.91 E-value=1.7e-21 Score=211.98 Aligned_cols=176 Identities=15% Similarity=0.092 Sum_probs=130.7
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHH-HHHHHHH-----HHHHHHHHHHHhhhccchhH
Q 006710 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNA-VNNFLGI-----SQASSVLGGFLADAYLGRYW 137 (634)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~-~~~~~~~-----~~~~~l~~G~lsDr~~GRr~ 137 (634)
+..||+......+..+++.+-...+. ....++.++++.+..+.+.. .+....+ ..++.++.|+++||+ |||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~ 87 (434)
T PRK15075 10 RESKARAILRVTSGNFLEMFDFFLFG-FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRK 87 (434)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHH
Confidence 34556667777777777777775544 44557888999887765433 3332222 235788999999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCC
Q 006710 138 TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (634)
Q Consensus 138 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~ 217 (634)
+++.+.+++.++.++++++.....+. ......++++|+++|++.+...+....+++|.+|
T Consensus 88 ~l~~~~~~~~~~~~l~~~~~~~~~~~--------------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p 147 (434)
T PRK15075 88 GLIVTLSIMASGTLLIAFVPGYATIG--------------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIAT 147 (434)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHH--------------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCC
Confidence 99999999999999888862100000 0001257889999999999999999999999999
Q ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh--------hccchHHHHHHHHH
Q 006710 218 ERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAI 267 (634)
Q Consensus 218 ~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~--------~~~gw~~~f~~~~~ 267 (634)
+++ |++.++++....++|..+++.+++.+. +..|||+.|++..+
T Consensus 148 ~~~------rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 148 PGR------KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred ccc------chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 999 999999988888888888887776652 46799999987543
No 57
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.91 E-value=9.1e-22 Score=217.78 Aligned_cols=168 Identities=14% Similarity=0.214 Sum_probs=146.6
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
+.+|+.+..+.+..++..+..+.+. .+..++.+++|++..+.++..+.+.++..++.++.|+++||+ |||++++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLIT-LVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 4566766666666666666665444 445667889999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
+..++.+++.++ .+.+.++++|++.|++.++..+...+++.|.+|+++
T Consensus 94 ~~~~~~~~~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---- 141 (496)
T PRK03893 94 LFSVGTLACGFA----------------------------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL---- 141 (496)
T ss_pred HHHHHHHHHHHH----------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH----
Confidence 999888888876 578889999999999999999999999999999998
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Q 006710 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~ 268 (634)
|++.+++++.+.++|..++|.+.+++.+..+|++.|++..+.
T Consensus 142 --r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 142 --RNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999875443
No 58
>TIGR00895 2A0115 benzoate transport.
Probab=99.91 E-value=2.4e-21 Score=207.11 Aligned_cols=384 Identities=15% Similarity=0.088 Sum_probs=234.1
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
+.+|+.+....+..+...+..+. ......++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~ 90 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAA-MGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSIL 90 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHH-HHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHH
Confidence 34555555555555555555543 34445667788999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
+..++.+++.++ .+.+.+++.+++.|++.+...+...++++|.+|+++
T Consensus 91 ~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---- 138 (398)
T TIGR00895 91 LFSVFTLLCALA----------------------------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF---- 138 (398)
T ss_pred HHHHHHHHHHHc----------------------------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh----
Confidence 888887777765 567788899999999999999999999999999988
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHH
Q 006710 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAF 304 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~ 304 (634)
|++.+++++.+..+|..++|.+++++.+..+|++.|++.++...+..++.....++......++++ ....+.....
T Consensus 139 --r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 214 (398)
T TIGR00895 139 --RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRP-ETVRRIVNAI- 214 (398)
T ss_pred --hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCH-HHHHHHHHHH-
Confidence 999999999999999999999999999989999999887654444444333333322111000000 0000000000
Q ss_pred hhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhH-HH
Q 006710 305 RKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPI-PA 383 (634)
Q Consensus 305 ~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~-~~ 383 (634)
..+ . ..+ .++. . .. ...+..... ..++.... . ...+........ +.
T Consensus 215 ~~~------~----~~~---~~~~--~-~~-~~~~~~~~~--------------~~~~~~~~-~-~~~~~~~~~~~~~~~ 261 (398)
T TIGR00895 215 APQ------M----QAE---AQSA--L-PE-QKATQGTKR--------------SVFKALFQ-G-KTARITVLLWLLYFM 261 (398)
T ss_pred HHh------c----ccc---cccc--c-cc-cccccchhh--------------HHHHHHhc-c-hhHHHHHHHHHHHHH
Confidence 000 0 000 0000 0 00 000000000 00000000 0 001111111111 11
Q ss_pred HHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHH
Q 006710 384 CTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGL 463 (634)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~ 463 (634)
....++...... . +..+..+.+ ....+.+.....+..++..++.+++.||+.+|. +..+.
T Consensus 262 ~~~~~~~~~~~~-~-~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------------~~~~~ 321 (398)
T TIGR00895 262 LLVGVYFLTNWL-P-KLMVELGFS------LSLAATGGALFNFGGVIGSIIFGWLADRLGPRV------------TALLL 321 (398)
T ss_pred HHHHHHHHHHHH-H-HHHHHcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH------------HHHHH
Confidence 111111111111 1 111111111 112233444455666777777888877766541 33333
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHH
Q 006710 464 AVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYA 543 (634)
Q Consensus 464 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~ 543 (634)
.+.++...+..... .+........++.+++.+...+...++..+.+|++.|+.++|+.
T Consensus 322 ~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 379 (398)
T TIGR00895 322 LLGAVFAVLVGSTL----------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWA 379 (398)
T ss_pred HHHHHHHHHHHHHh----------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 33333332222211 13344555667788999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHh
Q 006710 544 ALAGGLGCFAASILNSII 561 (634)
Q Consensus 544 ~~~~~ig~~lg~~l~~~v 561 (634)
+....+|..+++.+.+.+
T Consensus 380 ~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 380 IGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHhHHhc
Confidence 999999999999998754
No 59
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.91 E-value=1e-20 Score=203.03 Aligned_cols=174 Identities=14% Similarity=0.105 Sum_probs=145.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~ 145 (634)
+.+|..+......++..+..+...+.+ .++.+++|.|..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~-~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAI-ADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 356666666666666666665444443 456688999999999999999999999999999999998 999999999998
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
..++.+++..+ .+.+.+++.|++.|++.+...+....+..|.++.++
T Consensus 83 ~~~~~~~~~~~----------------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----- 129 (394)
T PRK11652 83 FILGTLVALFA----------------------------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ----- 129 (394)
T ss_pred HHHHHHHHHHH----------------------------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH-----
Confidence 88888877765 567889999999999999888888889999998887
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 275 (634)
|++..+++..+..++..++|.+++++.+..||++.|++.++..++..+.
T Consensus 130 -~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 130 -LRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988889999999877655444333
No 60
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.91 E-value=8.9e-21 Score=203.43 Aligned_cols=162 Identities=14% Similarity=0.056 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
++.+....++..++...+...++ .+.+++|.+..+.+++.+.+.+...++.+++|+++||+ |||++++++.+++.++.
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAI-ALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGC 82 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHH
Confidence 45566666776666544444444 34678999999999999999999999999999999998 99999999999998887
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
+.+.++ .+. ++.|+++|++.+...|...+++.|.+|+++ |+++
T Consensus 83 ~~~~~~----------------------------~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a 125 (393)
T PRK11195 83 LLMLFG----------------------------IHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKA 125 (393)
T ss_pred HHHHHH----------------------------HHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHH
Confidence 776654 232 678999999999999999999999999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHH
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~ 272 (634)
.++.....++|..+||.++|++.+. .|+..+++.....+++
T Consensus 126 ~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 126 NGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999874 4776666655444333
No 61
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.91 E-value=1.1e-20 Score=203.30 Aligned_cols=391 Identities=12% Similarity=-0.002 Sum_probs=238.3
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
-+-||.+....+..++..++.+....+++.|+ +++|.+.++.++..+.+.++..++.+++|+++||+ ||||++..+.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~ 86 (402)
T TIGR00897 9 IGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLL 86 (402)
T ss_pred cCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHH
Confidence 34566777788888888888777777888887 57899999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
+..++.+++..... .. .+.+.+++.|++.|++.+...+...+.+.+.+|+++
T Consensus 87 ~~~~~~~~~~~~~~-----~~-------------------~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~---- 138 (402)
T TIGR00897 87 LWCVGHAAFIVFGL-----GH-------------------ANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN---- 138 (402)
T ss_pred HHHHHHHHHHHHhc-----cC-------------------ccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH----
Confidence 98887665532110 00 356777889999999988888888888999999988
Q ss_pred hhhhhHHHHHHHHHHHHH-HHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHH
Q 006710 225 THLDRFFNFFYLSVTVGA-IVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAA 303 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~-~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a 303 (634)
|++++++++.+.++|. .++|.+++++.+..||+..++.......+..++.+...++.+ ++++.++
T Consensus 139 --~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------- 204 (402)
T TIGR00897 139 --LSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIF-TPQHMQT----------- 204 (402)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCC-CcccccC-----------
Confidence 9999999999999996 589999999888888765555444333333222222222110 0000000
Q ss_pred HhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHH
Q 006710 304 FRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPA 383 (634)
Q Consensus 304 ~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~ 383 (634)
++ + ..+..+. ++.. .++++.....+..++
T Consensus 205 ---------------------~~-------~-----~~~~~~~--------------~~~~----~~~~~~~~~~~~~~~ 233 (402)
T TIGR00897 205 ---------------------RE-------K-----FSELGKA--------------ATIL----FTNPNVLLGGMVRII 233 (402)
T ss_pred ---------------------Cc-------c-----hhhHHHH--------------HHHH----HcChhHHHHHHHHHH
Confidence 00 0 0000000 0000 001111111111111
Q ss_pred HHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHH
Q 006710 384 CTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGL 463 (634)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~ 463 (634)
....++....+.+ .+..+ .+++.. ..+.+..+..+..++..++.+++.||+.||.. .+..+.
T Consensus 234 ~~~~~~~~~~~~p-~~~~~-~g~s~~------~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~----------~~~~~~ 295 (402)
T TIGR00897 234 NTIGLFGFAVFLP-MFVAE-LGFSTS------EWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT----------VRWFGG 295 (402)
T ss_pred HHHHHHHHHHHHH-HHHHH-cCCChh------HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH----------HHHHHH
Confidence 1122222222222 22221 222211 12233344556667778888888888876621 011222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHH
Q 006710 464 AVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYA 543 (634)
Q Consensus 464 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~ 543 (634)
+..+++.+.+...... . . .+.+..++..++.|++.....+ ......+. +++.||+++|+.
T Consensus 296 l~~~~~~~~l~~~~~~----------------~-~-~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~-~~~~~g~~~g~~ 355 (402)
T TIGR00897 296 VGCGIFTLALYYIPQH----------------F-G-HSFAVALIIAIALGIFLAGYVP-LAAVFPTL-APKHKGAAMSVL 355 (402)
T ss_pred HHHHHHHHHHHHHHHc----------------c-C-CcHHHHHHHHHHHHHHHHHHHH-HHHHHHhh-CcchhHHHHHHH
Confidence 2222222222211100 0 0 1344445556667777666544 34455555 456899999999
Q ss_pred HHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHh
Q 006710 544 ALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYS 606 (634)
Q Consensus 544 ~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~ 606 (634)
++...+++.+++.+.+.+.+..+ +...|++.+++.+++.+...+.
T Consensus 356 ~~~~~lg~~~gp~i~g~l~~~~g------------------~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 356 NLSAGLSAFLAPAIAVLFIGFFG------------------AIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc------------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998876433 2456777777777766665543
No 62
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.91 E-value=3.4e-21 Score=209.84 Aligned_cols=156 Identities=12% Similarity=0.059 Sum_probs=128.0
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccc
Q 006710 92 MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDR 171 (634)
Q Consensus 92 l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (634)
...++++ +|.+.++.++..+.+.++..++.++.|+++||+ |||+++.++.++..++.+++..... . .
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~---~--~------ 115 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPW---A--T------ 115 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcccc---c--c------
Confidence 3456665 599999999999999999999999999999998 9999999998888887776655311 0 0
Q ss_pred cccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 006710 172 ISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY 251 (634)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~ 251 (634)
.+...+++.|++.|++.|...+.....+.|.+|+++ |++++++++.+.++|+.++|.+.+.
T Consensus 116 -------------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~ 176 (438)
T TIGR00712 116 -------------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLL 176 (438)
T ss_pred -------------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHH
Confidence 345677888999999999999989999999999999 9999999999999999999887775
Q ss_pred Hh-hccchHHHHHHHHHHHHHHHHHHHHh
Q 006710 252 IQ-MEHGWGSAFGALAIAMGISNMLFFIG 279 (634)
Q Consensus 252 l~-~~~gw~~~f~~~~~~~~i~~~~~~~~ 279 (634)
+. ...+||+.|++.++..++..+..++.
T Consensus 177 ~~~~~~~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 177 GMAWFNDWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 44 45689999999887766654444333
No 63
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=7.6e-22 Score=201.66 Aligned_cols=397 Identities=12% Similarity=0.059 Sum_probs=254.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 006710 72 LFIFGNEMAERMAYFGLSVN---MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (634)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~---l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~ 148 (634)
+.++...++.+.+||.+.-+ ...++.++.++|.+|.+.+.+.+.+.+.++-.+.|.+|||. +.|+.+.+++++..+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai 106 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHH
Confidence 56777778888888887644 55788899999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhh
Q 006710 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (634)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~ 228 (634)
..+++.++ .+...+.+..++.|..+|.-+|.+...++.+|++++ ||
T Consensus 107 ~nil~Gfs----------------------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG 152 (448)
T COG2271 107 VNILFGFS----------------------------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RG 152 (448)
T ss_pred HHHHHhhh----------------------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cC
Confidence 99999987 677888888899999999999999999999999999 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHH--HHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhh
Q 006710 229 RFFNFFYLSVTVGAIVAFTLV--VYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRK 306 (634)
Q Consensus 229 ~~~~~~~~~~~lg~~~~p~i~--~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~ 306 (634)
+..++++.+-|+|+++.|.+. +++..+.+||..|+++++++++..+..+...+..+++ .-
T Consensus 153 ~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs----~G-------------- 214 (448)
T COG2271 153 TWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQS----EG-------------- 214 (448)
T ss_pred ceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccc----cC--------------
Confidence 999999999999999999999 8999888999999999987665555544433322111 10
Q ss_pred hcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHH
Q 006710 307 RHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTI 386 (634)
Q Consensus 307 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~ 386 (634)
.|.-.++ ..+..|.. ++.++++. ...|+.+. +-+-..|.+ ..+.+..+
T Consensus 215 ----LP~ie~~---~~d~~e~~----~~~~~~~~-----------------ls~~~i~~-~YVL~Nk~i---W~la~a~v 262 (448)
T COG2271 215 ----LPPIEEY---RGDPLEIY----EEEKENEG-----------------LTAWQIFV-KYVLKNKLI---WLLALANV 262 (448)
T ss_pred ----CCCHHHh---hcCchhhh----hhhccCCC-----------------ccHHHHHH-HHHHcChHH---HHHHHHHH
Confidence 1111111 00000000 00000000 00010000 001111111 11122222
Q ss_pred HHHHH---HHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHH
Q 006710 387 MLNVI---LTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGL 463 (634)
Q Consensus 387 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~ 463 (634)
..|+. .......++.+..+.+.. .+.+...+.-...+....+.++++|++.+... ...++
T Consensus 263 fvYivR~gi~dW~p~YL~e~k~~s~~------~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR-----------~p~~~ 325 (448)
T COG2271 263 FVYVVRYGINDWGPLYLSEVKGFSLV------KANWAISLFEVAGLPGTLLAGWLSDKLFKGRR-----------GPMAL 325 (448)
T ss_pred HHHHHHHHHhhhHHHHHHHhcCCCHH------HHHHHHHHHHHHhhHHHHHHHHHHHHhccccc-----------chHHH
Confidence 22221 122334555555555432 33333444455667788889999999975411 12222
Q ss_pred HH---HHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhcchhhHHH
Q 006710 464 AV---SILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVG--LLEFLYEEAPDAMKSI 538 (634)
Q Consensus 464 ~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~--~~~~~~~~~P~~~rg~ 538 (634)
++ ..+++..+... ++.+.+...+.+. .+|.....|. .-..+.|.+|++-.|+
T Consensus 326 i~~~~i~~~~~~~w~~---------------------~~~~~~l~~~~l~--~iGf~IyGPqmLiGl~a~e~~pK~AaGt 382 (448)
T COG2271 326 IFMLLITASLVLYWLA---------------------PNGSYLLDAILLF--IIGFLIYGPQMLIGLAAAEFVPKKAAGT 382 (448)
T ss_pred HHHHHHHHHHHHHHcC---------------------CCccHHHHHHHHH--HHHHHHhhHHHHHHHHHhccccHhhccc
Confidence 22 22222222111 1123333333333 3333333333 2345678899999999
Q ss_pred HHHHHHHHhHH-HHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhccce
Q 006710 539 GSAYAALAGGL-GCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYK 611 (634)
Q Consensus 539 ~~g~~~~~~~i-g~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~ 611 (634)
+.|+..++..+ |..++....+.+.+.. +| +..|.++.+.++++.++++...+..+
T Consensus 383 A~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~--------gW----------~g~Fi~~~~~a~l~~lll~~~~~~~~ 438 (448)
T COG2271 383 ATGFVGLFAYLIGAALAGLPLGYIADTW--------GW----------DGGFIVLSIAALLAILLLLPVWNAEE 438 (448)
T ss_pred hhchhhhHHHHhhHHhcCCcceeeEecC--------CC----------cchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999988 8888877777765532 36 45677777777777777666655433
No 64
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.90 E-value=4.5e-20 Score=197.93 Aligned_cols=172 Identities=16% Similarity=0.113 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
+....+..+....+.+...+.+| .+.+++|.|..+.++..+.+.++..++.++.|+++||+ |||+.++++.+++.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLP-RIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHH
Confidence 33444555556666655555444 55678999999999999999999999999999999998 99999999999988888
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
.++..+ .+...++++|+++|++.+...+...+++.|.+|+++ |++.
T Consensus 83 ~~~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~ 128 (392)
T PRK10473 83 LLCSLA----------------------------ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKV 128 (392)
T ss_pred HHHHHh----------------------------CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHH
Confidence 887765 466788899999999999999999999999999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
+++++...++|..++|.+++++.+..+|++.|++.++..++..+..+.
T Consensus 129 ~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 176 (392)
T PRK10473 129 LSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLF 176 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888889999998887665555544433
No 65
>PRK11043 putative transporter; Provisional
Probab=99.90 E-value=5.1e-20 Score=198.17 Aligned_cols=160 Identities=16% Similarity=0.241 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHH--HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhc
Q 006710 83 MAYFGLSVNMVTF--MFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMK 160 (634)
Q Consensus 83 ~~~~~~~~~l~~y--l~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~ 160 (634)
++++....++|.+ +.+++|.+.++.++..+++.++..++.+++|+++||+ |||+++..+.++..++..++.++
T Consensus 17 ~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~---- 91 (401)
T PRK11043 17 LGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWV---- 91 (401)
T ss_pred HHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHh----
Confidence 3333344444433 6789999999999999999999999999999999998 99999999998888888777765
Q ss_pred ccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHH
Q 006710 161 VFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTV 240 (634)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~l 240 (634)
.+.+.+++.|+++|++.+...+...+++.|.+|+++ +.+.++..+...++
T Consensus 92 ------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 141 (401)
T PRK11043 92 ------------------------ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVAL 141 (401)
T ss_pred ------------------------cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHH
Confidence 567888999999999988888888899999999887 88888888888899
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q 006710 241 GAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 241 g~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 277 (634)
|..++|.+++++.+..||++.|++..+..++..+..+
T Consensus 142 ~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (401)
T PRK11043 142 SPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL 178 (401)
T ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999989999999887766655544433
No 66
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.90 E-value=8e-21 Score=205.76 Aligned_cols=393 Identities=10% Similarity=-0.002 Sum_probs=229.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.++......++..++++...++++.|+++++|+|..+.+++.+.+.++..+++++.|+++||+ |||++++++..+..++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~ 89 (420)
T PRK09528 11 NYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLVL 89 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 467777788888888888899999999999999999999999999999999999999999998 9999998876665554
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
...+......+.... ......+++.++.|.+.....+....+. +..+ ++ ++.
T Consensus 90 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~------~g~ 141 (420)
T PRK09528 90 FGPFFIYVFAPLLQY--------------------NILLGAIVGGIYLGFGFLAGAGAIEAYI-ERVS-RR------SGF 141 (420)
T ss_pred HHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHhhhhhccchhhhhhHH-HHHH-hh------ccc
Confidence 432222100000000 0111112223333333333333333332 1111 22 566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcc
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHA 309 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~ 309 (634)
.++..+...++|..++|.+++++.+ .+|++.|++.++..++.+++.+..+++.++++...+
T Consensus 142 ~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 202 (420)
T PRK09528 142 EYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVAN------------------ 202 (420)
T ss_pred cchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhcc------------------
Confidence 7777778889999999999998876 589999988776665555544433222111000000
Q ss_pred cccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHH
Q 006710 310 AFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLN 389 (634)
Q Consensus 310 ~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~ 389 (634)
++. . .++.....+... . . + .+.+.............+
T Consensus 203 ----------------~~~-~------~~~~~~~~~~~~-~-------------l-----~-~~~~~~l~l~~~~~~~~~ 239 (420)
T PRK09528 203 ----------------ALG-A------NASAVSLKDALA-L-------------L-----K-LPKFWFLVLYVIGVACFY 239 (420)
T ss_pred ----------------chh-c------ccccccHHHHHH-H-------------c-----c-CCCeEeehHHHHHHHHHH
Confidence 000 0 000000000000 0 0 0 001111111111111122
Q ss_pred HHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHH
Q 006710 390 VILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILS 469 (634)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~ 469 (634)
..+.+....+..+.. .+...+ ....+.+..++.+...+..++.+++.||+++|. .+.++.++.+++
T Consensus 240 ~~~~~~~~~~~~~~~-~~~~~~--~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----------~~~~~~~l~~~~ 305 (420)
T PRK09528 240 DVFDQQFPNFFASFF-ATPEQG--TRVFGYLNSFQVFLEALIMFFAPFIINRIGAKN-----------ALLLAGTIMAVR 305 (420)
T ss_pred HHHHHHHHHHHHHHH-hccCcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-----------hhHHHHHHHHHH
Confidence 222222222221111 111100 011233444455566677888888888888773 256666666666
Q ss_pred HHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHH-HHHHhH
Q 006710 470 VIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAY-AALAGG 548 (634)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~ 548 (634)
.+.+++.. +.++++...++.+++.....+....++.+..|++.++...++ +++...
T Consensus 306 ~~l~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 362 (420)
T PRK09528 306 IIGSGFAT-----------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQ 362 (420)
T ss_pred HHHHHhcc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHH
Confidence 65554432 445566667778888888888888999999999999987665 677789
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 006710 549 LGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAY 608 (634)
Q Consensus 549 ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~ 608 (634)
+|+.+++.+.+.+.+..+ | ...|++.+++.++..++.++..+
T Consensus 363 lg~~ig~~~~G~l~~~~G--------~----------~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 363 LGAVFLSTLAGNLYDSIG--------F----------QGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HHHHHHHHHHHHHHHhhC--------c----------hHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999998876332 3 45677777777666665555444
No 67
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.90 E-value=5.6e-20 Score=196.58 Aligned_cols=363 Identities=10% Similarity=-0.000 Sum_probs=225.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHH----HHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA----IFTTIY 146 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~----~~~~~~ 146 (634)
.+.+.+..++...++....++++.|+. ++|+|.++.+++.+.+.+...++.++.|+++||+ ||+.... ++..++
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~ 83 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIF 83 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHH
Confidence 344555566666666666678888885 6899999999999999999999999999999998 9854332 222211
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
.+ ..+..+ ++.+.+++.|++++.+.+...|...++..|. .++
T Consensus 84 ~~--~~~~~~----------------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------ 125 (382)
T TIGR00902 84 AA--AFSAGA----------------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------ 125 (382)
T ss_pred HH--HHHHhh----------------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------
Confidence 11 122222 5678888999999999888888888876543 344
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhh
Q 006710 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRK 306 (634)
Q Consensus 227 r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~ 306 (634)
|++.++......++|..++|.+++++.+.+||+..|++..+..++.++. +...++. +++++.
T Consensus 126 ~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~~---~~~~~~-------------- 187 (382)
T TIGR00902 126 FGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLIG-FLIKPTI---PPKDAI-------------- 187 (382)
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HHcCCCC---CCCccc--------------
Confidence 7888999999999999999999999999999999988765543332222 2221110 000000
Q ss_pred hcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhh-HHHHH
Q 006710 307 RHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVP-IPACT 385 (634)
Q Consensus 307 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~-~~~~~ 385 (634)
. .+ +.+...+. .+.-..|++...+. .++..
T Consensus 188 ----------~-------~~---------~~~~~~~~-----------------------~~~l~~~~~~~~l~~~~l~~ 218 (382)
T TIGR00902 188 ----------P-------ED---------ESQGDSAF-----------------------IALLKNPMNLRFLAAVCLIQ 218 (382)
T ss_pred ----------c-------cc---------ccccchhH-----------------------HHHHcChHHHHHHHHHHHHH
Confidence 0 00 00000000 00001122222111 11112
Q ss_pred HHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHH
Q 006710 386 IMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAV 465 (634)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l 465 (634)
......+... +.+.+. .+.+. ...+.+..+..+..++...+ .+++.+| .+.++.+.+|.++
T Consensus 219 ~~~~~~~~~~-~~~l~~-~g~s~------~~~g~l~~~~~~~~i~~~~~----~~~l~~r-------~g~~~~l~~~~~~ 279 (382)
T TIGR00902 219 GAHAAYYGFS-AIYWQA-AGISA------SATGLLWGIGVLAEIIIFAF----SNKLFQN-------CSARDLLLISAIA 279 (382)
T ss_pred HHHHHHHHHH-HHHHHH-CCCCH------hHHHHHHHHHHHHHHHHHHH----hHHHHhh-------CCHHHHHHHHHHH
Confidence 2222222211 122211 11111 11222223333333344444 4444554 3445667888888
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH-
Q 006710 466 SILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAA- 544 (634)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~- 544 (634)
.++..+.+...+ +.+.++..-++.++..++..+....++.+. |++.+++++++++
T Consensus 280 ~~~~~~~~~~~~-----------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~ 335 (382)
T TIGR00902 280 CVGRWAIIGAIE-----------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNA 335 (382)
T ss_pred HHHHHHHHHhHh-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHH
Confidence 888877665543 455566667889999999999999999988 9999999999987
Q ss_pred HHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHH
Q 006710 545 LAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCA 602 (634)
Q Consensus 545 ~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~ 602 (634)
...++|..+++.+.|.+.+..+ ...|++.+++.++++++
T Consensus 336 ~~~g~g~~~g~~~~G~l~~~~g-------------------~~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 336 LAMGGLIAIFTAFAGFIYPTLG-------------------AGTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-------------------HHHHHHHHHHHHHHHHH
Confidence 5678999999999998877433 14577777777766444
No 68
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.90 E-value=4.4e-20 Score=197.95 Aligned_cols=392 Identities=7% Similarity=-0.066 Sum_probs=233.3
Q ss_pred ccccCCCc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchh
Q 006710 61 DLSKTGGW---IAALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY 136 (634)
Q Consensus 61 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr 136 (634)
-|..+++. |.++...+..+...... .+.+.+..++.+ ++|+|.+|.+++.+++.+.+.++.++.|++.||+ |.|
T Consensus 23 ~w~~~~~~~a~r~l~~s~~~f~~~F~~w-~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R 100 (462)
T PRK15034 23 FWENKGKHIARRNLWISVSCLLLAFCVW-MLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGR 100 (462)
T ss_pred HHhhcCchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCh
Confidence 34444444 55555444444433333 344445556554 8999999999999999999999999999999998 999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccC
Q 006710 137 WTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQF 216 (634)
Q Consensus 137 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~ 216 (634)
+++.++.++..+.+++++++... .. .++..+++.|++.|++ +...+.....++++|
T Consensus 101 ~v~~~~~ll~~i~~~~~~~a~~~----~~-------------------~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wf 156 (462)
T PRK15034 101 RWTVFSTAILIIPCVWLGIAVQN----PN-------------------TPFGIFIVIALLCGFA-GANFASSMGNISFFF 156 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc----cC-------------------CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHC
Confidence 99999999988888877764110 00 4678999999999998 667888999999999
Q ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-----h-------------ccchHHHHHHHHHHHHHHHHHHHH
Q 006710 217 DERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ-----M-------------EHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 217 ~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~-----~-------------~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
|+++ |+++++++....++|..+++++...+. . ..+|+.++++..+..++..++.++
T Consensus 157 p~~~------rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 157 PKAK------QGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred CHhH------hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 999999986556666655544443221 2 234676666666655555544444
Q ss_pred hccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCC
Q 006710 279 GTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINP 358 (634)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 358 (634)
..+..+ +.+..+.+..++ .|
T Consensus 231 ~~~~~~---~~~~~~~~~~~v----lk----------------------------------------------------- 250 (462)
T PRK15034 231 GMNDIA---SSRASIADQLPV----LQ----------------------------------------------------- 250 (462)
T ss_pred hCCCcc---ccccCHHHHHHH----hC-----------------------------------------------------
Confidence 322211 011111110000 00
Q ss_pred CCCccccchhhhHHHHHHhHhhHHHHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHH
Q 006710 359 SPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYST 438 (634)
Q Consensus 359 ~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 438 (634)
+.+. .....+.++....+..+......+... ..+. ........+-.+...+..|+.+++
T Consensus 251 ------------~~~~-Wllslly~~tFG~fvg~s~~lp~~~~~--~~~~------~~~l~~~~l~~l~~~l~rplgG~L 309 (462)
T PRK15034 251 ------------RLHL-WLLSLLYLATFGSFIGFSAGFAMLAKT--QFPD------VNILRLAFFGPFIGAIARSVGGAI 309 (462)
T ss_pred ------------CCch-hHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCh------HHHHHHHHHHHHHHHHHHHhhHHH
Confidence 0011 111111122222222222221222211 1110 011112233456677888999999
Q ss_pred HhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHH
Q 006710 439 FVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVF 518 (634)
Q Consensus 439 ~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~ 518 (634)
.||+++++ .+.++.+.+.++...+...... ... .+.+.....++.+.++.++
T Consensus 310 ADRiG~~~-----------vl~~~~i~~~i~~~~~~l~lp~----------------~~~-~~~~~~~~~~~~l~~~~G~ 361 (462)
T PRK15034 310 SDKFGGVR-----------VTLINFIFMAIFSALLFLTLPG----------------TGS-GNFIAFYAVFMGLFLTAGL 361 (462)
T ss_pred HHhcCchH-----------HHHHHHHHHHHHHHHHHHHhcc----------------ccc-cHHHHHHHHHHHHHHHhcc
Confidence 99988773 2455555444443322221100 000 2344444444444455555
Q ss_pred HHHHHHHHHHhhcch---------------------hhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccc
Q 006710 519 CIVGLLEFLYEEAPD---------------------AMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLA 577 (634)
Q Consensus 519 ~~~~~~~~~~~~~P~---------------------~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~ 577 (634)
.+....-.+.+.+|+ +..|.+.|+......+|+++.|.+.+...+.++
T Consensus 362 gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g----------- 430 (462)
T PRK15034 362 GSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTG----------- 430 (462)
T ss_pred cchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcC-----------
Confidence 555555555555553 267889999999999999999988887776554
Q ss_pred cCCccchhhHHHHHHHHHHHHHHHHHHHhhccc
Q 006710 578 QNINTGRFDYLYWLLAVLSVINFCAFLYSAYRY 610 (634)
Q Consensus 578 ~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~ 610 (634)
++...|+.+.+..++++.+.|..+.|.
T Consensus 431 ------~~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 431 ------SPVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred ------CcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 124567778888888888888777554
No 69
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.90 E-value=6.4e-20 Score=195.47 Aligned_cols=158 Identities=17% Similarity=0.215 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCC
Q 006710 85 YFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMP 164 (634)
Q Consensus 85 ~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (634)
.....+.++.+. +++|+|.++.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++...+.++
T Consensus 7 ~~~~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~-------- 76 (377)
T PRK11102 7 IDMYLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALA-------- 76 (377)
T ss_pred HHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHH--------
Confidence 334445556555 57999999999999999999999999999999998 99999999999999988888776
Q ss_pred CCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHH
Q 006710 165 NQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIV 244 (634)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~ 244 (634)
.+.+.+++.|+++|++.+...+...+++.|.+|+++ |++.+++++....+|..+
T Consensus 77 --------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~ 130 (377)
T PRK11102 77 --------------------QTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLL 130 (377)
T ss_pred --------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHH
Confidence 567888999999999999999999999999999988 999999999999999999
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 245 AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 245 ~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
+|.+++++.+..+|++.|++.++..++..+....
T Consensus 131 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 131 APIIGGWLLVWFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999889999998877766555444433
No 70
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.2e-21 Score=211.23 Aligned_cols=378 Identities=15% Similarity=0.173 Sum_probs=253.2
Q ss_pred HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCC
Q 006710 99 VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGS 178 (634)
Q Consensus 99 ~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (634)
+++++.++-+++.+.+..|+.+++..+|+++||+ |-|+++.++.++..+++++..++..
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~-------------------- 125 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS-------------------- 125 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6888999999999999999999999999999998 9999999999999999999998754
Q ss_pred CCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc-cc
Q 006710 179 CEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME-HG 257 (634)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~-~g 257 (634)
.+.+.+++.|+++|++.|...|+...+.+.+.|+++ |+++.++.+.+..+|.+++-.++|++.+. .|
T Consensus 126 ------~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~G 193 (466)
T KOG2532|consen 126 ------IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLG 193 (466)
T ss_pred ------hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC
Confidence 445578999999999999999999999999999999 99999999999999999999999999988 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCCccccCCCccccc
Q 006710 258 WGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAH 337 (634)
Q Consensus 258 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~ 337 (634)
|+++|++.+++.++..++++......+.+.+.-+. .
T Consensus 194 W~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~-----------------------~--------------------- 229 (466)
T KOG2532|consen 194 WPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISE-----------------------K--------------------- 229 (466)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCH-----------------------H---------------------
Confidence 99999999988877777766644322211110000 0
Q ss_pred CCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHh-hHHHHHHHHHHHHHhhhhHHHHHHhhcccCCCCcccc
Q 006710 338 TDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLV-PIPACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLP 416 (634)
Q Consensus 338 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (634)
+.+..+..+...........||+...... .+...+ ..+.-...+++...+.+ .|..+..+++.. .
T Consensus 230 --El~~I~~~k~~~~~~~~~~vP~~~i~ts~-----~vwai~~~~f~~~~~~~~l~~y~P-tY~~~VL~f~v~------~ 295 (466)
T KOG2532|consen 230 --ELKYIEKGKSEAHVKKKPPVPYKAILTSP-----PVWAIWISAFGGNWGFYLLLTYLP-TYLKEVLGFDVR------E 295 (466)
T ss_pred --HHHHHHhcccccccCCCCCCCHHHHHcCH-----HHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHhCCChh------h
Confidence 00000000000000001245654322111 111111 11122223333333333 344455566544 5
Q ss_pred CccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHH--HHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccc
Q 006710 417 VTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRV--GIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFL 494 (634)
Q Consensus 417 ~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i--~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (634)
.+.+.+++.+..++...+.+.+.|++.+| ... .+..+++ .++....+++++.+++....
T Consensus 296 ~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls---~t~~rkifn~i~~~~~ai~l~~l~~~~~~--------------- 356 (466)
T KOG2532|consen 296 TGFLSALPFLAMAIVKFVAGQLSDRLTFR-ILS---ETTVRKIFNTIAFGGPAVFLLVLAFTSDE--------------- 356 (466)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCc---hHhHHHHHHhHHHHHHHHHHHeeeecCCC---------------
Confidence 67788899999999999999999999887 321 3344444 44555555555554444310
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 006710 495 TAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPN 574 (634)
Q Consensus 495 ~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~ 574 (634)
+.+..++ .+.++.+.......+..-......+++.+..+|+.+....++.+++|.+++.+.. . . +..+
T Consensus 357 ------~~~~a~~-~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~---~-t~~e 424 (466)
T KOG2532|consen 357 ------HRLLAVI-LLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVT-D---N-TREE 424 (466)
T ss_pred ------cchHHHH-HHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeC-C---C-CHHH
Confidence 1112222 2222222222222232233333135889999999999999999999999997763 1 0 2234
Q ss_pred ccccCCccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 006710 575 WLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAY 608 (634)
Q Consensus 575 w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~ 608 (634)
| ..+|++.+++.++..+++.++..
T Consensus 425 W----------~~VF~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 425 W----------RIVFLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred H----------HHHHHHHHHHHHHhchheeEeec
Confidence 5 67899999999998888877763
No 71
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.89 E-value=5.7e-21 Score=202.67 Aligned_cols=152 Identities=13% Similarity=0.066 Sum_probs=134.2
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccc
Q 006710 92 MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDR 171 (634)
Q Consensus 92 l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (634)
...++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.+++.++
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~--------------- 80 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFS--------------- 80 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHh---------------
Confidence 34578889999999999999999999999999999999998 99999999999999998888876
Q ss_pred cccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHH-HHHH
Q 006710 172 ISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF-TLVV 250 (634)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p-~i~~ 250 (634)
.+.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++++.+.++|..++| ++++
T Consensus 81 -------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~ 141 (379)
T TIGR00881 81 -------------TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLF 141 (379)
T ss_pred -------------hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHH
Confidence 577889999999999999999999999999999988 99999999999999999999 5677
Q ss_pred HHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 251 YIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 251 ~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
.+.+..+|++.|++.+++.++..+..+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 142 GIAELYSWHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHhe
Confidence 7777789999998877665554444433
No 72
>PRK10133 L-fucose transporter; Provisional
Probab=99.89 E-value=1.8e-19 Score=195.86 Aligned_cols=155 Identities=13% Similarity=-0.031 Sum_probs=126.2
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~ 145 (634)
+....+..+....+...+........+| .+++++|.|..+.++..+.+.++..++.++.|+++||+ |||+++.++.++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~ 100 (438)
T PRK10133 23 SYIIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFL 100 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 3444556666666666666654444444 56899999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
+.++.+++..... ..+...++++|+++|+|.|...+...++++|..|+++
T Consensus 101 ~~~~~~l~~~~~~-------------------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~----- 150 (438)
T PRK10133 101 YALGAALFWPAAE-------------------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS----- 150 (438)
T ss_pred HHHHHHHHHHHHh-------------------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh-----
Confidence 9999887642210 0577899999999999999999999999999866665
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQ 253 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~ 253 (634)
|...++++.....+|..+||.+++.+.
T Consensus 151 -~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 151 -GHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666788888888999999998877554
No 73
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.4e-22 Score=207.08 Aligned_cols=182 Identities=18% Similarity=0.221 Sum_probs=163.9
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
+..++.+.++.++.+++++--|.+.. ...-.++.+|++++..|++.+.|.+...+..|++|+|+||| .||+++.+|..
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~ 106 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIF 106 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHH
Confidence 34456688889999999999987766 45667888999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
++.+++++++++ ..++++.+.|.+.|+|.+.+.|..+++++|.||.+.
T Consensus 107 iW~~Av~~~~fs----------------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~---- 154 (493)
T KOG1330|consen 107 IWTLAVFASGFS----------------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK---- 154 (493)
T ss_pred HHHHHHHHHHHH----------------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchh----
Confidence 999999999998 678999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHHHHHhccc
Q 006710 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGTPL 282 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~~~~ 282 (634)
|++.++++|+++++|.++|.+++.++....+ |||+|+..+++.++..++.++..++
T Consensus 155 --Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 155 --RSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred --hhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999988776 9999999888877766666555443
No 74
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.89 E-value=9.4e-20 Score=195.80 Aligned_cols=390 Identities=11% Similarity=0.008 Sum_probs=234.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.+|......++...+...+.++++.|+++++|.+..+.+++.+.+.+...++.++.|+++||+ |||+.++.+.+...++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVL 81 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 467788888888898888889999999999999999999999999999999999999999998 9999999887766554
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
...+......+.. . ......+++.+++.|++.+...+....+..|..+ + ++.
T Consensus 82 ~~~~~~~~~~~~~-~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~------~~~ 133 (396)
T TIGR00882 82 FAPFFIYVFGPLL-Q-------------------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--N------SNF 133 (396)
T ss_pred HHHHHHHHhhhHH-H-------------------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--h------ccc
Confidence 4332211000000 0 0123345666788888888888888877766432 2 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcc
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHA 309 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~ 309 (634)
.++......++|..++|.+++.+.+ .+|++.|++.+++.++..+..+...++. ++++... +
T Consensus 134 ~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------------~-- 194 (396)
T TIGR00882 134 EYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA----PSSATVA------------N-- 194 (396)
T ss_pred ccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC----chhhhhh------------c--
Confidence 5566777789999999999998765 5999999988776655544433322211 0000000 0
Q ss_pred cccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHH
Q 006710 310 AFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLN 389 (634)
Q Consensus 310 ~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~ 389 (634)
-.+. .++..+..+..+. .++ |.+...+.........+
T Consensus 195 ---------~~~~--------------~~~~~~~~~~~~~-------------------l~~-~~~~~~~l~~~~~~~~~ 231 (396)
T TIGR00882 195 ---------ALGA--------------NASAFSLKLALEL-------------------FRQ-RKFWMFVLYVVGVACVY 231 (396)
T ss_pred ---------cccc--------------ccCCCCHHHHHHH-------------------HcC-CcHHHHHHHHHHHHHHH
Confidence 0000 0000000000000 001 11111111111111111
Q ss_pred HHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHH
Q 006710 390 VILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILS 469 (634)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~ 469 (634)
....+....+...... +...+ ....+....+..+...+.....+++.||+++|. .+.++.++.+++
T Consensus 232 ~~~~~~~~~y~~~~~~-~~~~~--~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~-----------~l~~~~~l~~l~ 297 (396)
T TIGR00882 232 DVFDQQFANFFTSFFA-TPQQG--TRVFGYVTTMGELLNALIMFCAPLIINRIGAKN-----------ALLIAGTIMSVR 297 (396)
T ss_pred HHHHHHHHHHHHHhcc-ccccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-----------hHHHHHHHHHHH
Confidence 1111111222211110 11100 001223344445555666677777777777663 256666666665
Q ss_pred HHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHH-HHHHhH
Q 006710 470 VIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAY-AALAGG 548 (634)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~ 548 (634)
+...... .+.+++++..++.+++..........+..+..|++.++++.+. ++....
T Consensus 298 ~~~~~~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~ 354 (396)
T TIGR00882 298 IIGSSFA-----------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQ 354 (396)
T ss_pred HHHHHhc-----------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHH
Confidence 5443322 1445556666777887777766777788888888888887666 678889
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHH
Q 006710 549 LGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLY 605 (634)
Q Consensus 549 ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~ 605 (634)
+|+.+++.+.+.+.+..+ +...|.+.+++.++..++..+
T Consensus 355 lg~~~~~~l~G~l~~~~G------------------~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 355 LAMIFLSTLAGNMYDSIG------------------FQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHHhHHHHHHhcc------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998876433 356777777776666555443
No 75
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.88 E-value=2.3e-19 Score=218.50 Aligned_cols=361 Identities=14% Similarity=0.092 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh--hHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSF--ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~--~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~ 147 (634)
.+...++..++..+...+....+..++...++.+. ...+++.+++.++..++.+++|+++||+ |||++++++.++.+
T Consensus 10 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~ 88 (1146)
T PRK08633 10 GFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEV 88 (1146)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHH
Confidence 44555556666666555555555666666666654 3468899999999999999999999998 99999999987766
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
++.+++.++... .+.+.++++|+++|++.+...+...++++|.+|+++ |
T Consensus 89 ~~~~~~~~~~~~-------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r 137 (1146)
T PRK08633 89 GLTLLIVLAYYL-------------------------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------L 137 (1146)
T ss_pred HHHHHHHHHHHH-------------------------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------c
Confidence 665555443210 457889999999999999999999999999999998 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhc--------c-chHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHH
Q 006710 228 DRFFNFFYLSVTVGAIVAFTLVVYIQME--------H-GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQ 298 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~~p~i~~~l~~~--------~-gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (634)
+++++++..+.++|.++||.+++++.+. . +|++.+.+..+..++..+++.+..++.+.......
T Consensus 138 ~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 210 (1146)
T PRK08633 138 SRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF------- 210 (1146)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc-------
Confidence 9999999999999999999999998765 2 34444433333322222222222221110000000
Q ss_pred HHHHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhH
Q 006710 299 VLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRL 378 (634)
Q Consensus 299 v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 378 (634)
+.+ ........... ++ .....+.+...
T Consensus 211 -------------------------~~~---------~~~~~~~~~~~--------------~~-----~l~~~~~~~~~ 237 (1146)
T PRK08633 211 -------------------------DKK---------KYLFPKLLWRN--------------LK-----LLRSDRVLWLA 237 (1146)
T ss_pred -------------------------ccc---------ccccHHHHHHH--------------HH-----HHhcCcHHHHH
Confidence 000 00000000000 00 00000111111
Q ss_pred h-hHHHHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhH
Q 006710 379 V-PIPACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQ 457 (634)
Q Consensus 379 l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~ 457 (634)
+ ...+...........+ ..+.....+.+.. ...+.+.....+..++...+.+++.|++.++ .
T Consensus 238 ~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~-----~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~-----------~ 300 (1146)
T PRK08633 238 IIGLSYFWFISQLAQANF-PAYAKEVLGLDNT-----FQVQYLLAASAIGIGIGSLLAGRLSGRHIEL-----------G 300 (1146)
T ss_pred HHHHHHHHHHHHHHHHhh-HHHHHHHhCCCcH-----HHHHHHHHHHHHHHHHHHHHHHHHhCCceEc-----------c
Confidence 1 1111111111111111 1122211111110 0122333334444455555666655554433 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHH
Q 006710 458 RVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKS 537 (634)
Q Consensus 458 ~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg 537 (634)
.+.++.++++++++++.... +.+++++..++.|++.++..+...+++.+.+|++.||
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg 357 (1146)
T PRK08633 301 LVPLGALGLALSLFLLPTAP-----------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELG 357 (1146)
T ss_pred chhHHHHHHHHHHHHHHHhh-----------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchh
Confidence 25556666666655554332 4455666678889999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhh
Q 006710 538 IGSAYAALAGGLGCFAASILNSIIK 562 (634)
Q Consensus 538 ~~~g~~~~~~~ig~~lg~~l~~~v~ 562 (634)
.++|+.++...+|..+++.+.+.+.
T Consensus 358 ~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 358 KVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988877766553
No 76
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.88 E-value=1e-18 Score=188.83 Aligned_cols=388 Identities=12% Similarity=0.030 Sum_probs=228.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccch-hHHHHHHHHHHHHHH
Q 006710 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR-YWTIAIFTTIYLAGL 150 (634)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GR-r~~i~~~~~~~~~~~ 150 (634)
..+.+..++...++-...++++.|+.+++|++.++.|++.+.+.++..++++++|.++||+ || |+++.++.++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~ 83 (418)
T TIGR00889 5 AKLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLL 83 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHH
Confidence 3455666666677766668999999999999999999999999999999999999999997 65 778888777776666
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhh--------ccCCCCCcc
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGA--------DQFDERSKD 222 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a--------d~~~~~~~~ 222 (634)
.++.+. .+.+.+++.|++.|++.+...+...+... |......
T Consensus 84 ~~~~~~----------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~-- 133 (418)
T TIGR00889 84 FFAAQV----------------------------TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP-- 133 (418)
T ss_pred HHHHHh----------------------------cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC--
Confidence 666554 45677788888888887776666555432 2222222
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHH
Q 006710 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVA 302 (634)
Q Consensus 223 ~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 302 (634)
|.+.++ .+|.++||.+++.+.....|. +|++.++..++..+..+ ..++.+..+++++.
T Consensus 134 ----~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~---------- 191 (418)
T TIGR00889 134 ----PIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFAL-TLPDIPVAKSTAKM---------- 191 (418)
T ss_pred ----Ceeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHh-cCCCCCCCcccccc----------
Confidence 444444 378888898888884433454 45555544444333322 22221100000000
Q ss_pred HHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhH-
Q 006710 303 AFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPI- 381 (634)
Q Consensus 303 a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~- 381 (634)
...+....+.. . . .++ +++......
T Consensus 192 -------------------------------~~~~~~~~~~~---~-~------------------~k~-~~~~~~~~~~ 217 (418)
T TIGR00889 192 -------------------------------SIKVMLGLDAF---I-L------------------FKN-KRMAIFFFFS 217 (418)
T ss_pred -------------------------------CHHHHhhhhHH---H-H------------------hcC-CCeeeHHHHH
Confidence 00000000000 0 0 000 011111111
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHhhcccCCC-Ccc-ccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHH
Q 006710 382 PACTIMLNVILTEFLTLSVQQAYTMNTHMG-KLK-LPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRV 459 (634)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i 459 (634)
++......... .....+... .+.+...+ ++. ...+....+..+..++...+.+++.||+++|+ .+
T Consensus 218 ~~~~~~~~~~~-~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~-----------~l 284 (418)
T TIGR00889 218 MLLGAPLQITN-IFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKK-----------VM 284 (418)
T ss_pred HHHHhHHHHHH-HhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-----------HH
Confidence 11111111111 111111111 11111100 000 11233344455556666777777888777663 36
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHH
Q 006710 460 GIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIG 539 (634)
Q Consensus 460 ~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~ 539 (634)
.++.++.++++.++...... . .+.+.+++..++.++++++..+....++.+.+|++.|+++
T Consensus 285 ~~~~~~~~v~~~l~~~~~~~------------------~-~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~ 345 (418)
T TIGR00889 285 LLSLVAWALRFGFFAYGDPE------------------Y-FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASA 345 (418)
T ss_pred HHHHHHHHHHHHHHHHcCcc------------------h-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 77777777766555432100 0 1233445567788999999999999999999999999999
Q ss_pred HHHHH-HHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhccc
Q 006710 540 SAYAA-LAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRY 610 (634)
Q Consensus 540 ~g~~~-~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~ 610 (634)
+|+.+ ....+|+.+|+.+.+.+.+..+ .+..- +++..|.+.+++.+++.+.++++.++.
T Consensus 346 ~g~~~~~~~~lg~~iGp~l~G~l~~~~g--~~~~~----------~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 346 QGLFTLMCNGFGSLLGYILSGVMVEKMF--AYGTF----------DWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhc--cccCC----------chHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99997 6788999999999998877543 10001 235677888888787777777777654
No 77
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.87 E-value=5.1e-20 Score=195.26 Aligned_cols=158 Identities=16% Similarity=0.099 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
.+...+..+......+...+.++.++++++|+|..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 45566666666777777777777789999999999999999999999999999999999998 99999999999999998
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccch-hHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSW-QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
++++++ . +.+.+++.|+++|++.+. .+...++++|.+|+++ |++
T Consensus 82 ~~~~~~----------------------------~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~------r~~ 126 (366)
T TIGR00886 82 LWAGLA----------------------------VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKI------QGT 126 (366)
T ss_pred HHHHHH----------------------------hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhh------hhH
Confidence 888876 5 778899999999999665 4567889999999998 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh----------ccchHHHHHH
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQM----------EHGWGSAFGA 264 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~----------~~gw~~~f~~ 264 (634)
..+++....++|..+++.+++.+.. ..+|++.|++
T Consensus 127 ~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 127 ALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 9999887778888877777665543 2479999844
No 78
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.87 E-value=1.5e-18 Score=185.50 Aligned_cols=338 Identities=10% Similarity=0.018 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchh----HHHHHHHHHHHHHHHHH
Q 006710 78 EMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY----WTIAIFTTIYLAGLTGI 153 (634)
Q Consensus 78 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr----~~i~~~~~~~~~~~~~~ 153 (634)
.+...++...+.++++.|++ ++|.|..+.+++.+++.+...++.+++|+++||+ ||+ +.+.+...+. ....+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH--HHHHH
Confidence 34444556666778888885 5899999999999999999999999999999998 984 3332222211 11111
Q ss_pred HHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHH
Q 006710 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (634)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 233 (634)
..+ ++.+.+++.|++.|++.+...|...++..+. .++ |++.++.
T Consensus 89 ~~~----------------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~------~~~a~~~ 132 (382)
T PRK11128 89 FGA----------------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQ------IGLDYGK 132 (382)
T ss_pred Hhc----------------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--Hhh------ccCCcch
Confidence 111 4678888899999999998888888887775 233 6677777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccc
Q 006710 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSS 313 (634)
Q Consensus 234 ~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~ 313 (634)
.....++|.++||.+++++.+++||+..|++.++..++..+..+ ..++ .+++++.
T Consensus 133 ~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~-~~~~---~~~~~~~--------------------- 187 (382)
T PRK11128 133 VRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQL-LRPT---IMPQGES--------------------- 187 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH-ccCC---CCCcccc---------------------
Confidence 77778899999999999999999999999877754444333222 1111 0110000
Q ss_pred cccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhh-HHHHHHHHHHHH
Q 006710 314 SELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVP-IPACTIMLNVIL 392 (634)
Q Consensus 314 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~-~~~~~~~~~~~~ 392 (634)
++. ..+...++. +....|.+...+. .++........+
T Consensus 188 ------------~~~-------~~~~~~~~~-----------------------~i~~~~~~~~~~~~~~l~~~~~~~~~ 225 (382)
T PRK11128 188 ------------RQQ-------ESAGWPAWK-----------------------ALLKEPTVWRFLLCVSLLQGSHAAYY 225 (382)
T ss_pred ------------ccc-------cccccchHH-----------------------HHHcChhHHHHHHHHHHHHHHhHhHH
Confidence 000 000000000 0001111211111 111111111111
Q ss_pred HhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 006710 393 TEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIW 472 (634)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~ 472 (634)
... ..+..+ .+.+. ...+.+..+..+..++...+.+++.||+.+| +.+..+.++.+++++.
T Consensus 226 ~~~-~~~~~~-~g~s~------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----------~~l~~~~~~~~~~~~~ 286 (382)
T PRK11128 226 GFS-AIYWQA-AGYSA------STIGYLWSLGVVAEVLIFAFSNRLFRRWSAR-----------DLLLLSAICGVVRWGL 286 (382)
T ss_pred HHH-HHHHHH-CCCCH------hHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----------HHHHHHHHHHHHHHHH
Confidence 111 112111 11111 1122333334444444445555555544433 4466777777776655
Q ss_pred HHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH-HHhHHHH
Q 006710 473 AGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAA-LAGGLGC 551 (634)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~ig~ 551 (634)
+...+ +.+++++..++.|+++++..+....++.+. |++.+++++++.+ ....+|.
T Consensus 287 ~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~ 342 (382)
T PRK11128 287 MGSTT-----------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSI 342 (382)
T ss_pred HHhhh-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHH
Confidence 54332 445566677788999999999999998887 4555688899886 5567888
Q ss_pred HHHHHHHHHhhccc
Q 006710 552 FAASILNSIIKSVT 565 (634)
Q Consensus 552 ~lg~~l~~~v~~~~ 565 (634)
.+|+.+.|.+.+..
T Consensus 343 ~ig~~i~G~l~~~~ 356 (382)
T PRK11128 343 AIMTVLSGFLYQHL 356 (382)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999887743
No 79
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.87 E-value=4.5e-18 Score=187.52 Aligned_cols=383 Identities=11% Similarity=0.058 Sum_probs=232.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc----cchhHH-HHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY----LGRYWT-IAIFTT 144 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~----~GRr~~-i~~~~~ 144 (634)
..+..+...+...+..+.....++.|+.+ .|.|.++.+.. +..... +++.+++|+++||+ +||||. ++++.+
T Consensus 13 ~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~-~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i 89 (491)
T PRK11010 13 NSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFF-SLVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHH-HHHHHH-HHHHHHHHHHHHcccccCCCCchHHHHHHHH
Confidence 35666666677777777777777888654 59999888886 223333 36889999999995 288886 556666
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
+..++...+++.. |. .+.+.+.+.+++.+++.+...+...++..|++|+++
T Consensus 90 ~~~~~~~~~a~~~------~~-------------------~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~---- 140 (491)
T PRK11010 90 LLLVAIAAMGFLE------PG-------------------TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE---- 140 (491)
T ss_pred HHHHHHHHHHHcC------Cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh----
Confidence 6666666665531 11 467788888999999999999999999999999988
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHH
Q 006710 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAA 303 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~-~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a 303 (634)
|+++.++...+..+|..+++.+++++.+ ..|||..|++.++..++..+..+.. ++.+..+++.+..
T Consensus 141 --rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~-~e~~~~~~~~~~~---------- 207 (491)
T PRK11010 141 --RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLA-PEPTDTIPVPKTL---------- 207 (491)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhc-CCCccccccccch----------
Confidence 9999999999999999999999999988 4699999999887665554443332 2110000000000
Q ss_pred HhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHH
Q 006710 304 FRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPA 383 (634)
Q Consensus 304 ~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~ 383 (634)
.+ ...+ ++++...+ +....+ .+....
T Consensus 208 -----------------------------------~~-~~~~--------------~l~~~~~~--~~~~~~--ll~~~l 233 (491)
T PRK11010 208 -----------------------------------EQ-AVVA--------------PLRDFFGR--NNAWLI--LLLIVL 233 (491)
T ss_pred -----------------------------------hh-hHHH--------------HHHHHHcC--cCHHHH--HHHHHH
Confidence 00 0000 00000000 001111 111111
Q ss_pred HHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCcccc-chhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHH
Q 006710 384 CTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMP-VFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIG 462 (634)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G 462 (634)
............ ..+..+..+.+.. ..+.+. ....+..++...+.+++.||+++|. .+.++
T Consensus 234 ~~~~~~~~~~~~-~~~l~~~~G~s~~------~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~-----------~l~i~ 295 (491)
T PRK11010 234 YKLGDAFAMSLT-TTFLIRGVGFDAG------EVGLVNKTLGLLATIVGALYGGILMQRLSLFR-----------ALMIF 295 (491)
T ss_pred HHHHHHHHHHHH-HHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-----------HHHHH
Confidence 111111222222 2222222222211 122222 2333456677778888888887652 23334
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHH
Q 006710 463 LAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAY 542 (634)
Q Consensus 463 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~ 542 (634)
.++.+++.+.+...... . .+.+.+....++..+..++..+...++..+..|++.+++..|+
T Consensus 296 ~~l~~l~~l~~~~l~~~------------------~-~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl 356 (491)
T PRK11010 296 GILQGVSNAGYWLLSIT------------------D-KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFAL 356 (491)
T ss_pred HHHHHHHHHHHHHHHhc------------------c-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHH
Confidence 44433333222211100 0 1333344444555555566667778888899999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHh
Q 006710 543 AALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYS 606 (634)
Q Consensus 543 ~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~ 606 (634)
.+....+|..+++.+.+.+.+..+ +..+|.+.+++++++++..+++
T Consensus 357 ~~s~~~lg~~~~~~~~G~l~~~~G------------------~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 357 LSALSAVGRVYVGPVAGWFVEAHG------------------WPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC------------------hHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988888887766332 3567777777777776666655
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.87 E-value=3.4e-19 Score=216.66 Aligned_cols=341 Identities=14% Similarity=0.016 Sum_probs=198.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH--HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCc
Q 006710 105 ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI--YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPA 182 (634)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (634)
...+++.+++.+...++.+++|+++||+ |||+++.....+ .........+..
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~------------------------- 105 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL------------------------- 105 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------
Confidence 4578888899999999999999999998 999986442222 221211111110
Q ss_pred cchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHH
Q 006710 183 KSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAF 262 (634)
Q Consensus 183 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f 262 (634)
.+++.++++|+++|++.+...|...+++.|++|+++ |++++++.+.+.++|.++||.++|++....+|++.|
T Consensus 106 --~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~ 177 (1140)
T PRK06814 106 --NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATISGNFVILV 177 (1140)
T ss_pred --hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 467899999999999999999999999999999998 999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCCccccCCCcccccCCcch
Q 006710 263 GALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFR 342 (634)
Q Consensus 263 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 342 (634)
++.+++.++++++.+...+. +..++..... .. .
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------------------------------------------~~---~ 210 (1140)
T PRK06814 178 ALLMGIAVLGWLASLFIPKT-GNAAPDLKID-------------------------------------------RN---I 210 (1140)
T ss_pred HHHHHHHHHHHHHHhhCCCC-CCCCCCCeec-------------------------------------------cc---h
Confidence 55444444443333322111 1100000000 00 0
Q ss_pred HHHHHHhhhccccCCCCCCccccchhhhHHHHHHhH-hhHHHHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCcccc
Q 006710 343 CLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRL-VPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMP 421 (634)
Q Consensus 343 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (634)
..+..... + .....+.+... +..++....+.....+.+ .+..+..+.+ ....+.+.
T Consensus 211 ~~~~~~~~-----------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~------~~~~g~~~ 267 (1140)
T PRK06814 211 IRSTITLL-----------K-----YAKADKRIWLAILGISWFWLVGAVVLSQLP-LLAKETLGGD------ENVATLFL 267 (1140)
T ss_pred HHHHHHHH-----------H-----HHhcCchHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHcCCc------hHHHHHHH
Confidence 00000000 0 00001111111 111111122222222222 2222222211 11233344
Q ss_pred chhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcch
Q 006710 422 VFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLS 501 (634)
Q Consensus 422 ~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 501 (634)
....+..++...+.+++.++..++. .+..+.++.+++.+.+.+................. -... .+
T Consensus 268 ~~~~~g~~ig~~~~g~l~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~-~~ 333 (1140)
T PRK06814 268 AVFSVGVAVGSFLASKLSEGRITLL-----------YVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILV--FLSK-RH 333 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeee-----------eehHHHHHHHHHHHHHHhcccccccccccccchhh--hhcc-cc
Confidence 4555566666666666654333221 13333333333333222210000000000000000 0000 13
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Q 006710 502 AYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKS 563 (634)
Q Consensus 502 ~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~ 563 (634)
.+.+++.++++|++.++..++..+.+.+.+|++.+|+++|+.++...++..+++.+.+.+..
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 334 GWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777888999999999999999999999999999999999999999999999988754
No 81
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.87 E-value=3.5e-18 Score=187.54 Aligned_cols=359 Identities=14% Similarity=0.065 Sum_probs=227.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
+..+....++.+++.......++- +..++.-|+...+++.....+...+..+++|.++||+ .|||+++.+-++..+..
T Consensus 12 Fr~lw~a~~iS~lG~~~~~va~~w-lv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~ 89 (524)
T PF05977_consen 12 FRRLWIAQLISNLGDWMQTVALAW-LVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVA 89 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHH
Confidence 333445555555555433333333 3345667899999999999999999999999999998 99999999998877665
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
+.+++.... .. .+.+.+++.-++.|++.+...|...+++.|+.|+++ ...+
T Consensus 90 ~~L~~l~~~----~~-------------------~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A 140 (524)
T PF05977_consen 90 LLLAVLAFF----GL-------------------LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAA 140 (524)
T ss_pred HHHHHHHHh----Cc-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHH
Confidence 555543221 00 467788888899999999999999999999999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhccc
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAA 310 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~ 310 (634)
.++.....|+...+||.++|.+....|-.+.|.+.++..++.++.+...++....++...+ .+.+-+
T Consensus 141 ~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~~e---~~~~~l---------- 207 (524)
T PF05977_consen 141 NALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSSLPRE---RFFSAL---------- 207 (524)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccchh---hhhhhH----------
Confidence 9999999999999999999999888888889998887766655444333222111100000 000000
Q ss_pred ccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhH-HHHHHHHH
Q 006710 311 FSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPI-PACTIMLN 389 (634)
Q Consensus 311 ~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~-~~~~~~~~ 389 (634)
.+.-.. +...+.+...+.. +++.....
T Consensus 208 ---------------------------------~~G~ry-------------------v~~~~~l~~~l~~~~~~~l~~~ 235 (524)
T PF05977_consen 208 ---------------------------------REGLRY-------------------VRSSPPLRSVLLRSFLFNLFAS 235 (524)
T ss_pred ---------------------------------HHHHHH-------------------HhcchHHHHHHHHHHHHHHhhh
Confidence 000000 0000111111111 11111111
Q ss_pred HHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHH
Q 006710 390 VILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILS 469 (634)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~ 469 (634)
... .....+..+..+.+.. .-+.+.....+..++.. .+..++.+| .+..+.+..+.++.+++
T Consensus 236 a~~-aLlPl~a~~~l~~~a~------~yGll~a~~gvGai~Ga----l~~~~l~~~-------~~~~~lv~~~~~~~a~~ 297 (524)
T PF05977_consen 236 AVW-ALLPLFARDVLGGGAS------GYGLLLAAFGVGAILGA----LLLPRLRRR-------LSSRRLVLLASLLFALA 297 (524)
T ss_pred HHH-HhhhHHHHHHhCCcHH------HHHHHHHHHHHHHHHHH----HHHHHhhcc-------cCcchhhHHHHHHHHHH
Confidence 111 1111222221111110 11122222223333333 333333333 23334456677777776
Q ss_pred HHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHH
Q 006710 470 VIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGL 549 (634)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~i 549 (634)
++.+++.. +.+...+.+++.|++.....+..++.+.+..|+++||++++++.+....
T Consensus 298 ~~~lal~~-----------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g 354 (524)
T PF05977_consen 298 LLLLALSP-----------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFG 354 (524)
T ss_pred HHHHhcch-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHH
Confidence 66655442 4566667778889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccC
Q 006710 550 GCFAASILNSIIKSVTG 566 (634)
Q Consensus 550 g~~lg~~l~~~v~~~~~ 566 (634)
+..+|.++.|.+.+..+
T Consensus 355 ~~~lGsll~G~la~~~g 371 (524)
T PF05977_consen 355 GMPLGSLLWGFLADHFG 371 (524)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99999999998877543
No 82
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.86 E-value=4.3e-19 Score=189.32 Aligned_cols=345 Identities=16% Similarity=0.134 Sum_probs=199.9
Q ss_pred HHHHHHHHHhC--CChhHHHHHHHH--HHH---HHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccC
Q 006710 91 NMVTFMFYVMH--KSFADSSNAVNN--FLG---ISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFM 163 (634)
Q Consensus 91 ~l~~yl~~~~~--~s~~~~~~~~~~--~~~---~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~ 163 (634)
+...++.++.. .++++.+...+. +.. ...++.++.|+++||+ |||++++++.++..++.++++++.......
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~ 92 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATIG 92 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhhH
Confidence 34555555544 334444444332 333 2346789999999998 999999999999999988888762110000
Q ss_pred CCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHH
Q 006710 164 PNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI 243 (634)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 243 (634)
......++++|+++|++.+...+...++++|.+|+++ |++..++.+.+..+|..
T Consensus 93 --------------------~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~ 146 (394)
T TIGR00883 93 --------------------IWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLL 146 (394)
T ss_pred --------------------HHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHH
Confidence 0112367889999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHh--------hccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccc
Q 006710 244 VAFTLVVYIQ--------MEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSE 315 (634)
Q Consensus 244 ~~p~i~~~l~--------~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~ 315 (634)
+++.++..+. +..+|++.|++.++..++..+..... ++ .++..+. +++
T Consensus 147 i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~------------~~~-------- 202 (394)
T TIGR00883 147 LAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNL-EE---TPVFEKA------------QEK-------- 202 (394)
T ss_pred HHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhc-CC---ChhHHHH------------Hhc--------
Confidence 9998776653 35689999988766554443332111 11 0000000 000
Q ss_pred cccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHH-HHHHHHHHHHHh
Q 006710 316 LIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIP-ACTIMLNVILTE 394 (634)
Q Consensus 316 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~-~~~~~~~~~~~~ 394 (634)
.+ ... .+++... ...++.+....... .....++.....
T Consensus 203 ---------~~-----------~~~------------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (394)
T TIGR00883 203 ---------HK-----------KKR------------------GPIRETL---TKHRKPFLLGLGLVIATTTTFYLITTY 241 (394)
T ss_pred ---------cc-----------ccc------------------CCHHHHH---HhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 0000000 00111121111111 111111111111
Q ss_pred hhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHH-HHHHHHHHHHHHH
Q 006710 395 FLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVG-IGLAVSILSVIWA 473 (634)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~-~G~~l~~~~~~~~ 473 (634)
. ..+..+..+.+.. ..+.......+..++..++.+++.||++||.. +. .+.+....+....
T Consensus 242 ~-~~~~~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-----------~~~~~~~~~~~~~~~~ 303 (394)
T TIGR00883 242 L-PTYLTQTLGLSAN------SALLVLMLSLILFFITIPLSGALSDRIGRRPV-----------LIIFTVLAALLAVPLL 303 (394)
T ss_pred H-HHHHHHhcCCChh------HHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH-----------HHHHHHHHHHHHHHHH
Confidence 1 1222121122111 12233344555667777888888888876631 22 2222222221121
Q ss_pred HHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHH-HHHhHHHHH
Q 006710 474 GIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYA-ALAGGLGCF 552 (634)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~-~~~~~ig~~ 552 (634)
..... . .+.+.++...++.+++.+...+...+++.+.+|++.|++++++. +..+.+|..
T Consensus 304 ~~~~~-------------------~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ 363 (394)
T TIGR00883 304 MALLD-------------------S-GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGG 363 (394)
T ss_pred HHHhc-------------------C-CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhh
Confidence 11110 0 13344445566778888888889999999999999999999984 566678888
Q ss_pred HHHHHHHHhhccc
Q 006710 553 AASILNSIIKSVT 565 (634)
Q Consensus 553 lg~~l~~~v~~~~ 565 (634)
+++.+.+.+.+..
T Consensus 364 ~~p~~~g~l~~~~ 376 (394)
T TIGR00883 364 FAPYIAAALVAMT 376 (394)
T ss_pred HHHHHHHHHHHHc
Confidence 9999999887643
No 83
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.86 E-value=8.4e-19 Score=190.77 Aligned_cols=355 Identities=14% Similarity=0.117 Sum_probs=219.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc---cchhH-HHHHHHHHHHHHHHHHH
Q 006710 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYW-TIAIFTTIYLAGLTGIT 154 (634)
Q Consensus 79 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~---~GRr~-~i~~~~~~~~~~~~~~~ 154 (634)
+...+....+..+++.|+++++|+++.+++++.++..+...+..|+.|+++||. +|||| .++++.++..++.+++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 445556666778899999999999999999999999999999999999999983 38754 67777777777777666
Q ss_pred HhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCC-CCCcchhhhhhhHHHH
Q 006710 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD-ERSKDYKTHLDRFFNF 233 (634)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~-~~~~~~~~~r~~~~~~ 233 (634)
.... ... ......+++.+++.+++.+.......++.+|+.+ +++ |++..++
T Consensus 89 ~~~~---~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~------R~~~~~~ 140 (437)
T TIGR00792 89 TTPD---FSA-------------------TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRE------RESLSTF 140 (437)
T ss_pred hCCC---CCc-------------------chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHH------HHHHHHH
Confidence 5411 000 0235666777788888888888888889999885 455 9999998
Q ss_pred HHHHHHHHHHHHHHHHHHHh-------hccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhh
Q 006710 234 FYLSVTVGAIVAFTLVVYIQ-------MEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRK 306 (634)
Q Consensus 234 ~~~~~~lg~~~~p~i~~~l~-------~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~ 306 (634)
...+.++|..+++.+.+.+. +..+|++.+++.+++..+..+..+...++.+++.++.+
T Consensus 141 ~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~--------------- 205 (437)
T TIGR00792 141 RRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNI--------------- 205 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCccc---------------
Confidence 88888888877776655543 24579998887777655555444333222110000000
Q ss_pred hcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHH
Q 006710 307 RHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTI 386 (634)
Q Consensus 307 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~ 386 (634)
+++.+..+.-+ .....|.+...+.. ..
T Consensus 206 -------------------------------~~~~~~~~~~~-------------------~l~~~~~~~~~~~~---~~ 232 (437)
T TIGR00792 206 -------------------------------EKKLSLKQIFK-------------------ALFKNDQLLILCLA---YL 232 (437)
T ss_pred -------------------------------ccCCCHHHHHH-------------------HHhCCHHHHHHHHH---HH
Confidence 00000000000 00001111111111 11
Q ss_pred HHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHH
Q 006710 387 MLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVS 466 (634)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~ 466 (634)
..+............. .....+. ....+.+..+..+..++..++.+++.||+++|. .+.+|.++.
T Consensus 233 ~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~-----------~~~~~~~~~ 297 (437)
T TIGR00792 233 FYNLAFNIKNGVQVYY---FTYVLGD-PELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI-----------LFAGGILLM 297 (437)
T ss_pred HHHHHHHHHcchhhee---EeeecCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-----------HHHHHHHHH
Confidence 1111111111111110 0001110 111122334445666777788888887777663 356677666
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-------hhhHHHH
Q 006710 467 ILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAP-------DAMKSIG 539 (634)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~ 539 (634)
+++++.+.+.. .+.+.+++..++.+++.+...+..+++..+..| ++.+|.+
T Consensus 298 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 355 (437)
T TIGR00792 298 VLGYLIFFFAG----------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLV 355 (437)
T ss_pred HHHHHHHHHcc----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHH
Confidence 66665544322 123444556677888888888888999888765 5678999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhcccC
Q 006710 540 SAYAALAGGLGCFAASILNSIIKSVTG 566 (634)
Q Consensus 540 ~g~~~~~~~ig~~lg~~l~~~v~~~~~ 566 (634)
.|++++...+|..+++.+.+.+.+..+
T Consensus 356 ~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 356 YSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999998877544
No 84
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.85 E-value=7.1e-26 Score=247.49 Aligned_cols=398 Identities=17% Similarity=0.128 Sum_probs=247.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccch
Q 006710 106 DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSW 185 (634)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (634)
..++..+.+.++..++.+++|+++||+ |||++++++.++..++.++..++... .
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~-------------------------~ 100 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY-------------------------N 100 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc-------------------------c
Confidence 467889999999999999999999998 99999999999999999998887110 1
Q ss_pred hHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh---ccchHHHH
Q 006710 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM---EHGWGSAF 262 (634)
Q Consensus 186 ~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~---~~gw~~~f 262 (634)
+...+.++|+++|++.|+..+..+.++.|..|++. |+...++.+.+..+|..++..++..+.. ..+||+.+
T Consensus 101 ~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~ 174 (451)
T PF00083_consen 101 NFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILL 174 (451)
T ss_pred ccccccccccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccc
Confidence 78899999999999999999999999999999999 9999999999889998888866544433 24599888
Q ss_pred HHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCCccccCCCcccccCCcch
Q 006710 263 GALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFR 342 (634)
Q Consensus 263 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 342 (634)
++..+..++.++.... .||||+| +..+++.+++.+..++.++.+..+
T Consensus 175 ~~~~~~~l~~~~~~~~--------------------------------~pESP~w-L~~~~~~~~A~~~l~~~~~~~~~~ 221 (451)
T PF00083_consen 175 IFGAIPSLLVLLLRFF--------------------------------LPESPRW-LLSKGRDEEAEKVLRKLRGKEIED 221 (451)
T ss_pred cccccccccccccccc--------------------------------cccccce-eccccccccccccccccccccccc
Confidence 8777665443332221 6999999 888888888877776644332211
Q ss_pred -HHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHH-HHHHHHhhhhHHHHHHhhcccCCCCccccCccc
Q 006710 343 -CLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIM-LNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCM 420 (634)
Q Consensus 343 -~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (634)
..+.......+.++....|+.+...+. .+++++..+.+...+.. .+....++.+.+... .+.+.. -..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--------~~~ 291 (451)
T PF00083_consen 222 EEIEEIKAEKKESQESKASWRDLFRNKK-YRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS--------FLA 291 (451)
T ss_pred ccccccccccccccccceeeeecccccc-ccccccccccccccccccccccccccccccccc-cccccc--------ccc
Confidence 011100000000000122333322211 12333322222222211 111111111111111 111111 111
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhcCccccccCCCCc
Q 006710 421 PVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAG-IFERYRRNYAISHGYEFSFLTAMPD 499 (634)
Q Consensus 421 ~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (634)
..+..+..++...+...+.|+++||.. +..|.++++++++.++ ..... .+ . ...
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~GRr~~-----------~i~~~~~~~~~~~~~~~~~~~~------~~----~---~~~- 346 (451)
T PF00083_consen 292 TLILGLVNFLGTLLAIFLIDRFGRRKL-----------LIIGLLLMAICSLILGIIFFLG------VS----S---SSW- 346 (451)
T ss_pred ccccccccccccccccccccccccccc-----------cccccccccccccccccccccc------cc----c---ccc-
Confidence 222223333344444477788888743 5566666666655553 11100 00 0 000
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccC
Q 006710 500 LSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQN 579 (634)
Q Consensus 500 ~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~ 579 (634)
.+...++...+..........+..+.+..|.+|.+.|+.++|+.....++++.+++.+.+.+.+..+ .
T Consensus 347 ~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~-------~----- 414 (451)
T PF00083_consen 347 WSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG-------G----- 414 (451)
T ss_pred cccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------c-----
Confidence 1222222222222233334456677888999999999999999999999999998888766543211 1
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHhhccceeccccCCCCc
Q 006710 580 INTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYRSEQKHGND 621 (634)
Q Consensus 580 ~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 621 (634)
...|++.++++++..++.+++.+++|++++||++++
T Consensus 415 ------~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 415 ------WGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred ------cccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 145777788888888888899999999998877654
No 85
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.85 E-value=1.7e-18 Score=183.13 Aligned_cols=326 Identities=13% Similarity=0.093 Sum_probs=209.7
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCccc
Q 006710 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (634)
Q Consensus 91 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (634)
.+...+.+++|+|.++++++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+.+ .+
T Consensus 21 ~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~-------------- 84 (355)
T TIGR00896 21 PLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA-------------- 84 (355)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh--------------
Confidence 344567889999999999999999999999999999999998 99999999988877776665 33
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 006710 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (634)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~ 250 (634)
.+.+.+++.|++.|++.+...+....+..|.+| ++ |++.+++++.+.++|..+++.+++
T Consensus 85 --------------~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~~~ 143 (355)
T TIGR00896 85 --------------PGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAATV 143 (355)
T ss_pred --------------ccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788899999999999988888888989886 46 999999999999999999999998
Q ss_pred HHhhcc--chHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCCccc
Q 006710 251 YIQMEH--GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSA 328 (634)
Q Consensus 251 ~l~~~~--gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~ 328 (634)
.+.+.. +||+.|.+.++..++..... . ++.++++++.. +.
T Consensus 144 ~l~~~~~~~w~~~f~~~~~~~~~~~~~~-~--~~~~~~~~~~~-----------------------~~------------ 185 (355)
T TIGR00896 144 PLAQHSGGHWQQALAWWALPALLALLAW-I--PQVRRRVAANQ-----------------------TT------------ 185 (355)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHH-h--hhhccccCCCC-----------------------CC------------
Confidence 887664 38988876655433332221 1 11110000000 00
Q ss_pred cCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhH-HHHHHHHHHHHHhhhhHHHHHHhhcc
Q 006710 329 IKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPI-PACTIMLNVILTEFLTLSVQQAYTMN 407 (634)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (634)
.. ..+++.. ++ +........ .+....++....+.+. +... .+.+
T Consensus 186 ----------~~-----------------~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~lp~-~~~~-~g~~ 230 (355)
T TIGR00896 186 ----------TR-----------------LTPVRIW-----RS-PLAWQVTVFFGLQSGLYYSLIGWLPA-ILIS-HGAS 230 (355)
T ss_pred ----------CC-----------------CCCchhh-----cC-HhHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-cCCC
Confidence 00 0000000 01 111111111 1111222222222211 2111 1221
Q ss_pred cCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 006710 408 THMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISH 487 (634)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~ 487 (634)
. ...+.+.....+..++..++.+++.||+.+|. +.+.++.++.+++.+.+.....
T Consensus 231 ~------~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~----------~~~~~~~~~~~~~~~~~~~~~~--------- 285 (355)
T TIGR00896 231 A------ATAGSLLALMQLAQAASALLIPALARRVKDQR----------GIVAVLAVLQLVGLCGLLFAPM--------- 285 (355)
T ss_pred H------HHHHHHHHHHHHHHHHHHHhHHHHHhhhccch----------HHHHHHHHHHHHHHHHHHHhhh---------
Confidence 1 12334445556666777778888777764331 2245666666666655544321
Q ss_pred CccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccC
Q 006710 488 GYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAP-DAMKSIGSAYAALAGGLGCFAASILNSIIKSVTG 566 (634)
Q Consensus 488 ~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P-~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~ 566 (634)
+..++ ..++.|++.+...+...+...+..+ ++.++..+++.+....++..+++.+.+.+.+.++
T Consensus 286 -------------~~~~~--~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 286 -------------HGLWA--WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred -------------hHHHH--HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11111 2456789999888888777765554 5778999999999899999999999998877554
No 86
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.84 E-value=1.7e-18 Score=177.56 Aligned_cols=393 Identities=13% Similarity=0.063 Sum_probs=260.5
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 006710 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFT 143 (634)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~ 143 (634)
++.++|.++...... ...+....+...+.+++.+++|+|+.|.++++.+-.+...+..++-|++.||+ |-|++..++.
T Consensus 9 k~~~~~~L~~S~~af-~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~ 86 (417)
T COG2223 9 KRIARRNLWLSTLAF-DVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSM 86 (417)
T ss_pred ccchhHHHHHHHHHH-HHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHH
Confidence 345566555554444 44444445667788899999999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcch
Q 006710 144 TIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY 223 (634)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~ 223 (634)
++..+-.+..+++... .+.+.+++..++.|++.+. .+...++++..||+++
T Consensus 87 ~l~~IP~~~~~~a~~~-------------------------~~~~~ll~~gll~G~~Gas-Fav~m~~~s~~fP~~~--- 137 (417)
T COG2223 87 LLLLIPCLGLAFAVTY-------------------------PSTWQLLVIGLLLGLAGAS-FAVGMPNASFFFPKEK--- 137 (417)
T ss_pred HHHHHHHHHHHHHccC-------------------------CchHHHHHHHHHHhcccce-ehcccccccccCChhh---
Confidence 9988888888877321 3457899999999999554 6788889999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc---hHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHH
Q 006710 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG---WGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVL 300 (634)
Q Consensus 224 ~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~g---w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (634)
+|.+++++. ..|+|..+...++..+....+ |+....+..+..++..+.+++..+...+.++..++..
T Consensus 138 ---qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~------ 207 (417)
T COG2223 138 ---QGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL------ 207 (417)
T ss_pred ---hhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc------
Confidence 999999999 999999999999988888888 9988888888887777776665544322111111000
Q ss_pred HHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhh
Q 006710 301 VAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVP 380 (634)
Q Consensus 301 ~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~ 380 (634)
| +.- +.+...+....+..
T Consensus 208 -----------~--------------------------------~~~-------------------~~v~~~~~~W~lsl 225 (417)
T COG2223 208 -----------P--------------------------------AQL-------------------KAVFSNKDTWLLSL 225 (417)
T ss_pred -----------h--------------------------------hHH-------------------HHHhcCcchHHHHH
Confidence 0 000 00000111111211
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHH
Q 006710 381 IPACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVG 460 (634)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~ 460 (634)
+-......++.+..+...+.......+ ....+.+....++...+..|+.+++.||++.+.. +.
T Consensus 226 lY~~tFG~Fvgfs~~l~~~~~~~fg~~------~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv-----------~~ 288 (417)
T COG2223 226 LYFATFGGFVGFSAYLPMYLVTQFGLS------PVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRV-----------TL 288 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC------hhhHHHHHHHHHHHHHHHHhccchhhhhccchhH-----------HH
Confidence 222222223333222222222112222 2334466667777888889999999999987732 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHH
Q 006710 461 IGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGS 540 (634)
Q Consensus 461 ~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~ 540 (634)
+.+..++++..+....... ..+ + .+....+..++..++..+..+....-.+...+| ++.|.+.
T Consensus 289 ~~f~~~~~~~~~l~~~~~~-----~~~----------~-~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~ 351 (417)
T COG2223 289 AVFVGMALAAALLSLFLTG-----FGH----------G-GSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVT 351 (417)
T ss_pred HHHHHHHHHHHHHHccccc-----ccc----------C-cchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHH
Confidence 5555566655555443211 000 1 133333333343444444444444555555565 4688999
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhccc
Q 006710 541 AYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRY 610 (634)
Q Consensus 541 g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~ 610 (634)
|+.....++|++.-|...+...+.++ .+...|+++..+.+++.+..+..+.|.
T Consensus 352 G~vga~G~lGGf~lp~~~g~~~~~tg-----------------~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 352 GIVGAIGGLGGFFLPLAFGVSLDLTG-----------------SYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred HHHHHhccccccchhHHHHHHHHhcc-----------------cHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998887665 134678888888888888887777654
No 87
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.84 E-value=8.7e-19 Score=195.24 Aligned_cols=141 Identities=15% Similarity=0.135 Sum_probs=128.3
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCccccccccc
Q 006710 97 FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLL 176 (634)
Q Consensus 97 ~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (634)
.+.++.+.....+..+++.++..+|++++|++|||+ |||+++++++++.+++.++.+++
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a-------------------- 168 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFA-------------------- 168 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHh--------------------
Confidence 355677888999999999999999999999999995 99999999999999999999988
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 006710 177 GSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (634)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~ 256 (634)
.++..+++.|++.|++.++...+...+++|+++++. |+...++ ......++.++|.+++++..
T Consensus 169 --------~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~-- 231 (521)
T KOG0255|consen 169 --------PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR-- 231 (521)
T ss_pred --------CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--
Confidence 789999999999999999999999999999999999 9999999 77888888889989998877
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 006710 257 GWGSAFGALAIAMGISNML 275 (634)
Q Consensus 257 gw~~~f~~~~~~~~i~~~~ 275 (634)
+||+.+++..+..++.++.
T Consensus 232 ~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 232 DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 8999999988776666555
No 88
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.83 E-value=1.6e-17 Score=175.71 Aligned_cols=157 Identities=13% Similarity=0.124 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc----cchhHHH-HHHHHHHHHHHHHHHHhhhhccc
Q 006710 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY----LGRYWTI-AIFTTIYLAGLTGITLCATMKVF 162 (634)
Q Consensus 88 ~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~----~GRr~~i-~~~~~~~~~~~~~~~~~~~~~~~ 162 (634)
+.......+.+++|+|.++.++.... .+...+ .+++|+++||+ +||||.+ +.+.++..+.+..+++..
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~----- 78 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV----- 78 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC-----
Confidence 33444555667889999999998655 333444 88999999997 4899975 556666665555554431
Q ss_pred CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHH
Q 006710 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (634)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 242 (634)
+. .+.+.+....++.+++.+...+...++++|++|+++ |+++.++...+.++|.
T Consensus 79 -~~-------------------~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~ 132 (356)
T TIGR00901 79 -PS-------------------TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGM 132 (356)
T ss_pred -cc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHH
Confidence 00 345566666677888888889999999999999988 9999999999999999
Q ss_pred HHHHHHHHHHhhccc--------hHHHHHHHHHHHHHHHHHHH
Q 006710 243 IVAFTLVVYIQMEHG--------WGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 243 ~~~p~i~~~l~~~~g--------w~~~f~~~~~~~~i~~~~~~ 277 (634)
.+++.+++++....+ ||..|++.++..++..+..+
T Consensus 133 ~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 133 LLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred HHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999888777 99999988876666554433
No 89
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.82 E-value=2.8e-16 Score=169.21 Aligned_cols=166 Identities=15% Similarity=0.119 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc----cchhH-HHHHHHHHHHHHH
Q 006710 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY----LGRYW-TIAIFTTIYLAGL 150 (634)
Q Consensus 76 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~----~GRr~-~i~~~~~~~~~~~ 150 (634)
...+...+.+.-....+|.|+.+ .|+|.++.+++...... .+..+++|+++||+ +|||| .++++.++..++.
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 34445555555566678889885 59999999998666655 68899999999996 27765 6777777777777
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
..+++.. +. .+.+.+++..++.+++.+...+...+++.|.+|+++ |+++
T Consensus 83 ~~l~~~~------~~-------------------~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~ 131 (402)
T PRK11902 83 AAMAFCP------PH-------------------AALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAG 131 (402)
T ss_pred HHHHhcC------cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHH
Confidence 7666541 00 356666767677788888889999999999999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHH
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQME-HGWGSAFGALAIAMGISNML 275 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~-~gw~~~f~~~~~~~~i~~~~ 275 (634)
.++...+.++|..+++.+++++.+. .|||..|++.++..++..+.
T Consensus 132 ~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 132 AAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888875 49999999877765544443
No 90
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.82 E-value=1.9e-16 Score=170.70 Aligned_cols=172 Identities=11% Similarity=0.023 Sum_probs=139.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
++.+...-+...+.. ++...+...+++++|.+..+.+++.+.+.++..++.++.|++.||+ |||+++.++.+++.++.
T Consensus 5 ~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 444554445544444 4555556677899999999999999999999999999999999998 99999999999999988
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
.++..+.. ..+.+.+++.|++.|+|.|...+...+++.+..|+++ |++.
T Consensus 83 ~l~~~~~~-------------------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~ 131 (410)
T TIGR00885 83 FLFWPAAE-------------------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRR 131 (410)
T ss_pred HHHHHHHh-------------------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHH
Confidence 77654311 0467889999999999999999999999999999888 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh--------------------------ccchHHHHHHHHHHHHHHHHH
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQM--------------------------EHGWGSAFGALAIAMGISNML 275 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~--------------------------~~gw~~~f~~~~~~~~i~~~~ 275 (634)
.++.+...++|..++|.+++.+.. ..+||++|++.++..++..++
T Consensus 132 ~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 132 LNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999887642 236999998777655444333
No 91
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.81 E-value=2.9e-16 Score=169.77 Aligned_cols=442 Identities=12% Similarity=0.018 Sum_probs=256.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh----ccchhHHHHHH-HHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADA----YLGRYWTIAIF-TTI 145 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr----~~GRr~~i~~~-~~~ 145 (634)
++.+....+...+++-...++++.|+ +++|.+....+++..+..+...+..|+.|++||| + ||||.++++ .+.
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHHH
Confidence 56666666777788766677777765 6799999999999999999999999999999995 7 999998875 555
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
..++..+++++.....+... . ..+.........++++..+..++....++...++++|++|+++++
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~----------~-~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~--- 149 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGD----------N-LDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR--- 149 (477)
T ss_pred HHHHHHHHHhCchhhhhccc----------c-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH---
Confidence 55555666554221110000 0 000000012234455555667788888889999999999988721
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH--hhcc-------------chHHHHHHHHHHHHHHHHHHHHhccccccCCCCC
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYI--QMEH-------------GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGG 290 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l--~~~~-------------gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 290 (634)
++.+.++.....++|..+|+.++++. .+.. +.++.|++.+++.++..++..+..++.+..++++
T Consensus 150 -~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~ 228 (477)
T TIGR01301 150 -TRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDD 228 (477)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCcccc
Confidence 36788999999999999999988865 2111 4678898888777776666555444432111100
Q ss_pred CcHHHHHHHHHHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhh
Q 006710 291 SPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVE 370 (634)
Q Consensus 291 ~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 370 (634)
.+ + . -++.. + ++.....+.+. .+.-+.
T Consensus 229 ~~--------------------~---~-~~~~~--~---------~~~~~~~~~~i------------------~~~~~~ 255 (477)
T TIGR01301 229 FI--------------------N---S-EAAPP--S---------KHGEEAFFGEL------------------FGAFKY 255 (477)
T ss_pred ch--------------------h---h-hcccc--c---------ccchhhhHHHH------------------HHHHHH
Confidence 00 0 0 00000 0 00000000000 000001
Q ss_pred HHHHHHhHhhHHHHHHHHHHHHHhhhhHHHHHHhhc-ccCCC-CccccCccccchhHHHHHHHHHHHHHHHhhhhccccC
Q 006710 371 EVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTM-NTHMG-KLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITG 448 (634)
Q Consensus 371 ~~k~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~ 448 (634)
--|.+.++....++..+.|..+..+.+.++-+...- +..-. .++- ...+.....+...+...+++.+..++.|+...
T Consensus 256 mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~-gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~ 334 (477)
T TIGR01301 256 LPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDD-GVRAGAFGLMLNSVVLGITSIGMEKLCRGWGA 334 (477)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 112333444445556666666666666655432211 11000 0000 00001111111122222444555556665321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhc-CccccccCCCCcch-HHHHHHHHHHHHHHHHHHHHHHH
Q 006710 449 HPRGASQLQRVGIGLAVSILSVIWAGIFERYRRN--YAISH-GYEFSFLTAMPDLS-AYWLLIQYCLIGIAEVFCIVGLL 524 (634)
Q Consensus 449 ~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~s-~~~lv~~~~l~g~g~~~~~~~~~ 524 (634)
++..-.++.++.+++++...++.....+ ....+ +. ..+... .+..+..+.+.|+.-+..+..-+
T Consensus 335 ------~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~Gi~~A~~~siPf 402 (477)
T TIGR01301 335 ------GKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGES------LPPPTGIKASALIVFAILGIPLAITYSIPF 402 (477)
T ss_pred ------chhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccc------cCcchhhHHHHHHHHHHhhHHHHHHHHHhH
Confidence 1122367888888888777655421000 00000 00 011012 36667788889999999999999
Q ss_pred HHHHhhcch--hhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHH
Q 006710 525 EFLYEEAPD--AMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCA 602 (634)
Q Consensus 525 ~~~~~~~P~--~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~ 602 (634)
+.+.+..|+ +..|..+|+.|.+..+...+.++..+.+.+..+ . +....+.+.++..+++.+.
T Consensus 403 al~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g--~--------------~~~~~~~~~gv~~~~aa~~ 466 (477)
T TIGR01301 403 ALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG--G--------------GNLPAFVVGAVAAFVSGLL 466 (477)
T ss_pred HHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcC--C--------------CCeeHHHHHHHHHHHHHHH
Confidence 999999995 455999999999999999999988887555433 0 1123566677777788887
Q ss_pred HHHhhccce
Q 006710 603 FLYSAYRYK 611 (634)
Q Consensus 603 ~~~~~~~~~ 611 (634)
.++..+|.+
T Consensus 467 ~~~~~~~~~ 475 (477)
T TIGR01301 467 ALILLPRPR 475 (477)
T ss_pred HHHhCCCCC
Confidence 777776654
No 92
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.81 E-value=1.8e-16 Score=173.67 Aligned_cols=150 Identities=15% Similarity=0.121 Sum_probs=124.2
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcc
Q 006710 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (634)
Q Consensus 90 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (634)
.....++.+++|-+ ....|+.+.+.++..+..++.|.|||.+ |||..++.+.++.++|.++++.+
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA------------- 128 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATA------------- 128 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcC-------------
Confidence 45567899999865 6678899999999999999999999987 99999999999999999999987
Q ss_pred cccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 006710 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (634)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~ 249 (634)
++...++++..+.|+|.|... .....++|+.|.+. |..+..+...........+|.++
T Consensus 129 ---------------~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia 186 (599)
T PF06609_consen 129 ---------------QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIA 186 (599)
T ss_pred ---------------CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHH
Confidence 788999999999999977655 55666899999988 88777766655555555677777
Q ss_pred HHHhhccchHHHHHHHHHHHHHHHHHH
Q 006710 250 VYIQMEHGWGSAFGALAIAMGISNMLF 276 (634)
Q Consensus 250 ~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (634)
..+..+.+|||.|++.++...+++++.
T Consensus 187 ~~~~~~~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 187 QLFAAHSGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred HHhccCCCcchHHHHHHHHHHHHHHHH
Confidence 766666789999999988766665543
No 93
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.79 E-value=1.1e-16 Score=159.76 Aligned_cols=438 Identities=13% Similarity=0.022 Sum_probs=249.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~ 145 (634)
-.|. .....+.....-...-.....+..-+....|.+..+..++......+..++...+|.++|++ |||+...+..+.
T Consensus 75 fq~y-l~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~ 152 (528)
T KOG0253|consen 75 FQWY-LFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLV 152 (528)
T ss_pred chhh-HHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHH
Confidence 3444 23333334444444434444455556667788888999999999999999999999999998 999998888776
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
..+.-++-..+ +|+..+.+.|.+.|+|.|+ .|...++-.|..|...
T Consensus 153 t~v~~~is~~s----------------------------pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~----- 198 (528)
T KOG0253|consen 153 TGVFGVISGAS----------------------------PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH----- 198 (528)
T ss_pred HHHHHHhhcCC----------------------------CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC-----
Confidence 66555544444 6888999999999999999 8999999999999888
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHh
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFR 305 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~ 305 (634)
|....-+. ....+|.++...+.-.+..+.||||..........+.....++..+.-|..-.++++.+.+. .+....+
T Consensus 199 -r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAle-tL~kiAr 275 (528)
T KOG0253|consen 199 -RWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALE-TLHKIAR 275 (528)
T ss_pred -CCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHH-HHHHHHH
Confidence 77776665 66778888888777777788899988776665444444444444443344444455544333 2333334
Q ss_pred hhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHH
Q 006710 306 KRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACT 385 (634)
Q Consensus 306 ~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~ 385 (634)
..+.++|.-... .+..++.|+..+. +|..+....++ .......... ..-+|+.+....+|+.+
T Consensus 276 mNg~qlplgvl~-~s~~~~~e~e~~~------------~~~~~~~a~ke--~rg~~~nLls--p~lrkttlllw~iwfgn 338 (528)
T KOG0253|consen 276 MNGKQLPLGVLE-SSAIDRQEQEESD------------LDDSKSSAAKE--VRGGTTNLLS--PKLRKTTLLLWRIWFGN 338 (528)
T ss_pred hcCCCCCcceee-eehhhhhhhhhhc------------hhhhhhccccc--cccchHhhcC--hHHHHHHHHHHHHHHhh
Confidence 333345432221 1111111111000 11111110000 0000000000 12355555555555544
Q ss_pred HHHHHHHHhhhhHHHHHHhhcccCCCCcccc--------------Ccccc-chhHHHHHHHHHHHHHHHhhhhccccCCC
Q 006710 386 IMLNVILTEFLTLSVQQAYTMNTHMGKLKLP--------------VTCMP-VFPGLSIFLILSLYYSTFVPLCRRITGHP 450 (634)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~-~~~~~~~~l~~~~~~~~~~~l~rr~~~~~ 450 (634)
...|.......+- ..|... .-++++...+ ..... .+..+.-+-...+..+++|+++||..
T Consensus 339 afsyyg~VLltte-lfqsgd-~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkT--- 413 (528)
T KOG0253|consen 339 AFSYYGSVLLTTE-LFQSGD-ACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKT--- 413 (528)
T ss_pred HHHHHHHHHHHHH-HHhccC-ccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhH---
Confidence 4333222222221 112110 0000000000 00000 11122222334456788899998854
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 451 RGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEE 530 (634)
Q Consensus 451 ~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~ 530 (634)
|...+++.++..+........ . .-..++... -+.....+...+.|..+.
T Consensus 414 --------Mal~l~~f~iflfll~~c~~r------------------n-~~tvllf~a----rafisg~fqvaYvYtPEV 462 (528)
T KOG0253|consen 414 --------MALSLILFGIFLFLLTTCKTR------------------N-AYTVLLFTA----RAFISGAFQVAYVYTPEV 462 (528)
T ss_pred --------HHHHHHHHHHHHHHHHHhcCc------------------c-hhHHHHHHH----HHHHhchheEEEEecCcc
Confidence 666666666555444332210 0 111222222 222333445678899999
Q ss_pred cchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhccc
Q 006710 531 APDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRY 610 (634)
Q Consensus 531 ~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~ 610 (634)
.|...|+.+.|.....+.+|+.+.|.+. +....+ ....-.+..++++++.+...++-.++
T Consensus 463 yPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s-------------------~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 463 YPTAVRATGVGTCSSMARIGGIFSPVIA-MRAELS-------------------TSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred cchhhhhcchhhhhhHHhhhhhhhhHHH-HHhccc-------------------eeehHHHHHHHHHHHHHHheeeeecc
Confidence 9999999999999999999999999887 433311 11123445666777777777777788
Q ss_pred eeccc
Q 006710 611 KYRSE 615 (634)
Q Consensus 611 ~~~~~ 615 (634)
|+|..
T Consensus 523 kGR~l 527 (528)
T KOG0253|consen 523 KGRSL 527 (528)
T ss_pred CCCCC
Confidence 87753
No 94
>PRK09848 glucuronide transporter; Provisional
Probab=99.78 E-value=3.1e-16 Score=171.35 Aligned_cols=364 Identities=10% Similarity=0.013 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc---cchhHHH-HHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTI-AIFTTIY 146 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~---~GRr~~i-~~~~~~~ 146 (634)
.+.-.+..+..++.+..+.++++.|+++.+|++..+++.+.....+...+..|+.|+++||. +||||.+ +++.+..
T Consensus 10 ~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~ 89 (448)
T PRK09848 10 IVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPL 89 (448)
T ss_pred HHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHH
Confidence 33334456667777777778888999999999999999999999999999999999999995 3777755 5555544
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
.+..+++..... ...+ ......+++..++.+++.+...+...++..++..+.++
T Consensus 90 ~~~~~~~~~~~~--~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~----- 143 (448)
T PRK09848 90 MIFSVLVFWVPT--DWSH-------------------SSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQS----- 143 (448)
T ss_pred HHHHHHHHhCcC--CCCc-------------------chHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHH-----
Confidence 444433322100 0000 02334444555677888888888888888887766432
Q ss_pred hhhHHHHHHH-----HHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHH
Q 006710 227 LDRFFNFFYL-----SVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLV 301 (634)
Q Consensus 227 r~~~~~~~~~-----~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 301 (634)
|.+..++-.+ ..+++..++|.+.+.........+..+. .+..+++.+..+......+++.+.+..
T Consensus 144 r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~e~~~~~~~--------- 213 (448)
T PRK09848 144 RARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWT-IVLAIAGMVLYFICFKSTRENVVRIVA--------- 213 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHH-HHHHHHHHHHHHHHHcCcEeccCCCcc---------
Confidence 7766555443 2445666677665543221111111111 111112222222111111111000000
Q ss_pred HHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhH
Q 006710 302 AAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPI 381 (634)
Q Consensus 302 ~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~ 381 (634)
+....+.-+ .....|.+....
T Consensus 214 --------------------------------------~~~~~~~~~-------------------~l~~n~~f~~~~-- 234 (448)
T PRK09848 214 --------------------------------------QPSLKISLQ-------------------TLKRNRPLFMLC-- 234 (448)
T ss_pred --------------------------------------CCCHHHHHH-------------------HHhCCchHHHHH--
Confidence 000000000 000011111111
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchh-HHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHH
Q 006710 382 PACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFP-GLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVG 460 (634)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~ 460 (634)
+.....+..+........+.. ...++ .....+.+...+ .+..++..++..++.+|+++| +.+.
T Consensus 235 -~~~~~~~~~~~~~~~~~~~~~---~~~~g-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~-----------~~~~ 298 (448)
T PRK09848 235 -IGALCVLISTFAVSASSLFYV---RYVLN-DTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK-----------NTFL 298 (448)
T ss_pred -HHHHHHHHHHHHHhhhheeeE---eeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHH
Confidence 111112222111111111110 00111 000011111122 233455566666666655544 4467
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh------
Q 006710 461 IGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDA------ 534 (634)
Q Consensus 461 ~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~------ 534 (634)
+|.++.+++.+.+.+.. . .+.+++.+..++.++|+++..+..++...+..|.+
T Consensus 299 ~g~~~~~i~~~~~~~~~--------------------~-~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~ 357 (448)
T PRK09848 299 IGALLGTCGYLLFFWVS--------------------V-WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGV 357 (448)
T ss_pred HHHHHHHHHHHHHHHcC--------------------c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCc
Confidence 78777777765554321 0 24455566677889999999999999999988764
Q ss_pred -hHHHHHHHHHHHhHHHHHHHHHHHHHhhcccC
Q 006710 535 -MKSIGSAYAALAGGLGCFAASILNSIIKSVTG 566 (634)
Q Consensus 535 -~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~ 566 (634)
.+|.++|++++.+.+|..+++.+.+.+....|
T Consensus 358 r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 358 RIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 46999999999999999999999998876554
No 95
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.77 E-value=8.9e-16 Score=168.85 Aligned_cols=363 Identities=13% Similarity=0.063 Sum_probs=207.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhh----hccch-hHHHHHHHHHHHHHH
Q 006710 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLAD----AYLGR-YWTIAIFTTIYLAGL 150 (634)
Q Consensus 76 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsD----r~~GR-r~~i~~~~~~~~~~~ 150 (634)
+..+..++.+..+..+++.|+++.+|++...++.+..+..+.-++..|+.|+++| |+ || |+.++++.+...++.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVVL 91 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHHH
Confidence 4455667777778889999999999999999999999999999999999999999 65 98 556666777666665
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCC-CCCcchhhhhhh
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD-ERSKDYKTHLDR 229 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~-~~~~~~~~~r~~ 229 (634)
+++... +.. ++......+++..++.+++.........++.+|+.+ +++ |.+
T Consensus 92 ~llf~~---p~~-------------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~e------R~~ 143 (473)
T PRK10429 92 FLLFSA---HLF-------------------EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRE------REQ 143 (473)
T ss_pred HHHHcC---CCC-------------------CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHH------HHH
Confidence 555432 100 001234445555566778888888888999999985 555 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-------ccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHH
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQM-------EHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVA 302 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~-------~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 302 (634)
..++-....++|+.+.+.+...+.. ..+|+....+.++..++..+..+...++.. .+++..+
T Consensus 144 l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~-~~~~~~~---------- 212 (473)
T PRK10429 144 LVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVY-SSDNQVS---------- 212 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecC-Ccccccc----------
Confidence 8888666677776666554443321 124555555544444433333332222210 0000000
Q ss_pred HHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHH
Q 006710 303 AFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIP 382 (634)
Q Consensus 303 a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~ 382 (634)
.++++.+..+.-+.. .++ |.+...+..
T Consensus 213 ---------------------------------~~~~~~~~~~~~~~~------------------~~n-~~~~~ll~~- 239 (473)
T PRK10429 213 ---------------------------------AEGSHLTLKDIVALI------------------YKN-DQLSCLLGM- 239 (473)
T ss_pred ---------------------------------ccccCCCHHHHHHHH------------------hcC-HHHHHHHHH-
Confidence 000000000000000 011 222222111
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHH
Q 006710 383 ACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIG 462 (634)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G 462 (634)
....+.......+...+.. ....+. ....+.+..+..+..++..++..++.+|+++|. .+.++
T Consensus 240 --~~~~~~~~~~~~~~~~y~~---~y~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~-----------~~~~~ 302 (473)
T PRK10429 240 --ALAYNIASNIINGFAIYYF---TYVIGD-ADLFPYYLSYAGAANLVTLILFPRLVKSLSRRI-----------LWAGA 302 (473)
T ss_pred --HHHHHHHHHHHhhheeeEE---EEECCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-----------HHHHH
Confidence 1111111111111111110 000000 001122333444566677777787777777663 24555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-------hhh
Q 006710 463 LAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAP-------DAM 535 (634)
Q Consensus 463 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~ 535 (634)
.++.+++.+.+...... . + .+.+.+++..++.+++.+...+...++..+..+ .+.
T Consensus 303 ~~~~~~~~~~~~~~~~~----------------~-~-~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~ 364 (473)
T PRK10429 303 SIFPVLSCGVLLLMGLA----------------A-P-HNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRC 364 (473)
T ss_pred HHHHHHHHHHHHHHhcc----------------C-c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccc
Confidence 55555444443322100 0 1 134455556677889999999999999999877 445
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhcccC
Q 006710 536 KSIGSAYAALAGGLGCFAASILNSIIKSVTG 566 (634)
Q Consensus 536 rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~ 566 (634)
.|...|.+.+...++..+++.+.+.+.+..|
T Consensus 365 ~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 365 ESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6779999999999999999999998877654
No 96
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.77 E-value=9e-16 Score=161.88 Aligned_cols=154 Identities=12% Similarity=0.031 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHhCCChhH-HHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCC
Q 006710 89 SVNMVTFMFYVMHKSFAD-SSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (634)
Q Consensus 89 ~~~l~~yl~~~~~~s~~~-~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (634)
.+++..|+.+++|++.++ .+.+.++|..++.++.+++|+++||+ |-|+++.++.+.+.+..+++.++
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa----------- 112 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLG----------- 112 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHH-----------
Confidence 345677999999999999 99999999999999999999999998 99999999999999999999987
Q ss_pred cccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHH
Q 006710 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (634)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~ 247 (634)
.+...+.+.|++.|++.|... ....++..++|+++ |+++.+++..+..+|.+++++
T Consensus 113 -----------------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~~ 168 (511)
T TIGR00806 113 -----------------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSSV 168 (511)
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999 99999999999999 999999999999999999999
Q ss_pred HHHHHhhccchHHHHHH---HHHHHHHHHHHHHHh
Q 006710 248 LVVYIQMEHGWGSAFGA---LAIAMGISNMLFFIG 279 (634)
Q Consensus 248 i~~~l~~~~gw~~~f~~---~~~~~~i~~~~~~~~ 279 (634)
+++++ ..+||++-+.+ ......+++++.++.
T Consensus 169 L~qll-~s~gWr~y~~Ln~Isl~s~~~a~~~a~~L 202 (511)
T TIGR00806 169 LGQLL-VTLGWISYSTLNIISLVFMTFSVFLALFL 202 (511)
T ss_pred HHHHH-HhcCchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 99994 56799875544 444455555554443
No 97
>PRK09669 putative symporter YagG; Provisional
Probab=99.77 E-value=9e-16 Score=167.52 Aligned_cols=173 Identities=10% Similarity=0.056 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc---cchhH-HHHHHHHHHHHHHH
Q 006710 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYW-TIAIFTTIYLAGLT 151 (634)
Q Consensus 76 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~---~GRr~-~i~~~~~~~~~~~~ 151 (634)
+..+..++.+..+..+++.|+++++|++..+++.+..+..+..++..|+.|+++||. +|||| .++++.+...+..+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 344556666667778899999999999999999999999999999999999999993 38754 55566666666655
Q ss_pred HHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHH
Q 006710 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (634)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 231 (634)
++... |.... ......+++..++.+++.........++.+|+.++.++ |.+..
T Consensus 96 l~f~~---p~~~~-------------------~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~e-----R~~l~ 148 (444)
T PRK09669 96 LTFYT---PDFGA-------------------TGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRE-----RHSLQ 148 (444)
T ss_pred HHHhC---CCCCc-------------------chHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHH-----HHHHH
Confidence 44432 11100 13455666666666777777777788999999854332 88888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-------ccchHHHHHHHHHHHHHHHHH
Q 006710 232 NFFYLSVTVGAIVAFTLVVYIQM-------EHGWGSAFGALAIAMGISNML 275 (634)
Q Consensus 232 ~~~~~~~~lg~~~~p~i~~~l~~-------~~gw~~~f~~~~~~~~i~~~~ 275 (634)
++.....++|..+++.+...+.. ..+|+..+.+.+++.++..++
T Consensus 149 ~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 149 SWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 88877788887777765443322 246776666666554444433
No 98
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.75 E-value=6.9e-16 Score=174.38 Aligned_cols=208 Identities=14% Similarity=0.103 Sum_probs=155.7
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
..+++.+++......+......+........+.++++++.++.+++.+.+.++..++.++.|+++||+ ||||.+.++++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~l 106 (633)
T TIGR00805 28 FSKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCA 106 (633)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHH
Confidence 35566555555545555555556666677788999999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhhc-cc-------------CCCCCcccccc-----c--ccCCCCCcc--chhHHHHHHHHHHHHHhh
Q 006710 145 IYLAGLTGITLCATMK-VF-------------MPNQDNCDRIS-----Q--LLGSCEPAK--SWQMLYLYTVLYITGFGA 201 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~-~~-------------~~~~~~~~~~~-----~--~~~~~~~~~--~~~~~~~~~~~~l~g~g~ 201 (634)
++.+|.+++++..... .. ....+.|...+ + +...|.... ...+..++++|+++|+|.
T Consensus 107 l~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~ 186 (633)
T TIGR00805 107 IMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGA 186 (633)
T ss_pred HHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccC
Confidence 9999999988763211 00 00123453110 0 011233222 124567889999999999
Q ss_pred hchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc----------------------chH
Q 006710 202 AGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH----------------------GWG 259 (634)
Q Consensus 202 g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~----------------------gw~ 259 (634)
+...+...+++.|.+|+++ |+..+++++.+..+|+++|+++++++.+.+ +||
T Consensus 187 ~~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWw 260 (633)
T TIGR00805 187 TPIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWW 260 (633)
T ss_pred CcchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHH
Confidence 9999999999999999999 999999999999999999999999887532 277
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 006710 260 SAFGALAIAMGISNMLFFIG 279 (634)
Q Consensus 260 ~~f~~~~~~~~i~~~~~~~~ 279 (634)
..|++.+++.++..+.++..
T Consensus 261 l~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 261 IGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 78887776665555444443
No 99
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.75 E-value=1.3e-15 Score=166.48 Aligned_cols=422 Identities=13% Similarity=0.073 Sum_probs=256.7
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 006710 72 LFIFGNEMAERMAYFGLSV---NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (634)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~---~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~ 148 (634)
|.+.+..|+.++..+++.. .+-..++++++.+..+++|+.++......+..|+.+.+.||+ |.|.+.+.|.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHH
Confidence 5566666666666666553 345667889999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHH-HHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVL-YITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
|.++..++ .+.+.+++.. ++.|+|.|........+++..|+++ |
T Consensus 124 g~~lssF~----------------------------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-------R 168 (509)
T KOG2504|consen 124 GLLLSSFA----------------------------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-------R 168 (509)
T ss_pred HHHHHHHH----------------------------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-------H
Confidence 99999998 6777787776 6789999999888888888666544 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhh
Q 006710 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKR 307 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~ 307 (634)
+.+.++-..+..+|..+-|.+..++.+.+|||+.+++.+.+.+-..+.....++.....++. ...+..+ .
T Consensus 169 ~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~--~~~~~~~--------~ 238 (509)
T KOG2504|consen 169 ALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN--EEKDLRN--------S 238 (509)
T ss_pred HHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch--hhhhhcc--------c
Confidence 99999988888999999999999999999999999988777655555555554433222221 0000000 0
Q ss_pred cccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCc-ccc--chh-hhHHHHHHhHhhHHH
Q 006710 308 HAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWK-LCT--VTQ-VEEVKTLVRLVPIPA 383 (634)
Q Consensus 308 ~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~--~~~-~~~~k~~~~~l~~~~ 383 (634)
....+..+.. .+. ....+...+.+ ...................+-+ ... +.+ ..++. .+.+.+
T Consensus 239 ~~~~~~~~~~--~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~----fl~~~~ 305 (509)
T KOG2504|consen 239 AASVESTPKP--VEL------RISERDSGLKK-LSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPK----FLLLAL 305 (509)
T ss_pred cccccccccc--ccc------ccccCCCCCCc-ccccchhhhhhCCccccccchhhhhhhhhHHHHcCch----HHHHHH
Confidence 0000000000 000 00000000000 0000000000000000000000 000 000 01111 111111
Q ss_pred HHHHHHHHHHhhhhHHHHHHh--hcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHH
Q 006710 384 CTIMLNVILTEFLTLSVQQAY--TMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGI 461 (634)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~ 461 (634)
......+.+......+..++. +.+ ....+.+..+..+..++..++.+++.|+-.. ..+....+
T Consensus 306 ~~~~~~~g~~~p~~~l~~~~~~~g~~------~~~aa~l~Siigi~~i~gRi~~G~laD~~~~---------~~~~~~~~ 370 (509)
T KOG2504|consen 306 SNLFAYLGFNVPFVYLPSYAKSLGLS------SNDAAFLLSIIGVSDIIGRIILGLLADKPGI---------RALVLFLL 370 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC------hhhhHHHHHHHHHhhhhhhhhhhhhcCcccc---------chHHHHHH
Confidence 111111111111112222221 222 2234445556667777778888877775542 23344556
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHH
Q 006710 462 GLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSA 541 (634)
Q Consensus 462 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g 541 (634)
++++.+++.++.... .+.+.++...+++|+..+...........+..+.+.-..+.|
T Consensus 371 ~ll~~gl~~~~~p~~-----------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~G 427 (509)
T KOG2504|consen 371 TLLIAGLARLFLPFA-----------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYG 427 (509)
T ss_pred HHHHHHHHHHHHHHh-----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHH
Confidence 666666665444433 255667777788898888888888888999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhh
Q 006710 542 YAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSA 607 (634)
Q Consensus 542 ~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~ 607 (634)
+..+.+.++..+|+.+.+.+.+.++ + |+..|...++..+++..+.++..
T Consensus 428 l~l~~~gi~~l~gpPiag~~~d~tg-------~----------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 428 LLLLFQGIGALVGPPIAGLLYDITG-------N----------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHhHHHHHcCcccceeeeeccC-------C----------eeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999997777655 1 23445555555555554444433
No 100
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.75 E-value=1e-15 Score=167.71 Aligned_cols=175 Identities=9% Similarity=-0.012 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc-----hhHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG-----RYWTIAIFTTI 145 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~G-----Rr~~i~~~~~~ 145 (634)
...+....+.+.+. +.+...++.++.+++|+|.++.+...+...+...+-++ +|+++||+ + ||+.++++.++
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHH
Confidence 34444567777777 67777888999999999999999998988888888665 99999998 7 77777777655
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
.. ......++.. + .......+.+++.+++.+......-++..|..+ ++++
T Consensus 105 ~~-~~~~~~l~~~-----~--------------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~--- 154 (468)
T TIGR00788 105 GS-AILYGLLPGK-----V--------------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS--- 154 (468)
T ss_pred HH-HHHHHhcccc-----c--------------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC---
Confidence 42 1222222200 0 223334446788999999999999999999998 4421
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
.++...++.+.+.++|..+|+.++|++.+..+|+..|++.++..++..+...+
T Consensus 155 ~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~ 207 (468)
T TIGR00788 155 AGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNL 207 (468)
T ss_pred cCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHh
Confidence 14445666677788999999999999999899999999887776666443333
No 101
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.75 E-value=3.3e-14 Score=152.48 Aligned_cols=176 Identities=11% Similarity=-0.025 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHH--HHHHHHHHHHHHHHH-HHHhhhccchhHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNA--VNNFLGISQASSVLG-GFLADAYLGRYWTIAIFTTIYL 147 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~--~~~~~~~~~~~~l~~-G~lsDr~~GRr~~i~~~~~~~~ 147 (634)
...+....+.+.+.+....+.+|.|++ +.|.|.++.+.. .......-.+..|+. ++.+||+ ||||.+++.+.+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 445566677777777777788888886 569999999986 355566665666666 6689997 99999766654322
Q ss_pred H-HHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 148 A-GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 148 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
. ....+... .+. . ....+++....+.++..+...+..-++..|..++++
T Consensus 81 ~~~~~~~~~~--~~~--~--------------------~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------ 130 (390)
T TIGR02718 81 SACLASLALV--GPD--V--------------------AGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------ 130 (390)
T ss_pred HHHHHHHHcC--Ccc--h--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------
Confidence 2 12222211 000 0 112333444455666667777777777778777776
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 227 r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
++...+....+..+|..+|+.+.+++.+..||+..|++.++..++..+..+.
T Consensus 131 ~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~ 182 (390)
T TIGR02718 131 LAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLW 182 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777878889999999988899999999999999888776655554433
No 102
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.75 E-value=1.5e-17 Score=170.37 Aligned_cols=225 Identities=19% Similarity=0.130 Sum_probs=172.3
Q ss_pred cccccccccccccchhhhhcCCCccCCCCcc-ccCCCCccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006710 22 HQRKKLSVYFIESDNRRMALGRGYTGGTTPV-NVHGKPIADLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVM 100 (634)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~ 100 (634)
.+++|++++.|+.|+.++|+.+.++++++.. ....+-. .+...+++ -+|++.+..++.++..|++..|.|.|+.+..
T Consensus 206 ~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~-~~YVL~Nk-~iW~la~a~vfvYivR~gi~dW~p~YL~e~k 283 (448)
T COG2271 206 LRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIF-VKYVLKNK-LIWLLALANVFVYVVRYGINDWGPLYLSEVK 283 (448)
T ss_pred hCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHH-HHHHHcCh-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc
Confidence 3678999999999998866344332111111 0000001 12223333 3899999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-chhH-HHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCC
Q 006710 101 HKSFADSSNAVNNFLGISQASSVLGGFLADAYL-GRYW-TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGS 178 (634)
Q Consensus 101 ~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~-GRr~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (634)
|+|..++++..+.|..+...+++++||+|||++ |||. +-++++++.+++.+....+ |.
T Consensus 284 ~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~-------~~------------- 343 (448)
T COG2271 284 GFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA-------PN------------- 343 (448)
T ss_pred CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC-------CC-------------
Confidence 999999999999999999999999999999998 7664 5556666666666555554 21
Q ss_pred CCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHH-HHHHHHHHHHHHhhccc
Q 006710 179 CEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTV-GAIVAFTLVVYIQMEHG 257 (634)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~l-g~~~~p~i~~~l~~~~g 257 (634)
.+..+..++.+++|+..-+++-.+.....|..|++. -|++.++..++..+ |+.++....+++.+.+|
T Consensus 344 ------~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g 411 (448)
T COG2271 344 ------GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTATGFVGLFAYLIGAALAGLPLGYIADTWG 411 (448)
T ss_pred ------ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccchhchhhhHHHHhhHHhcCCcceeeEecCC
Confidence 456778888899999999999999999999999998 67777776666556 88889888999999899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc
Q 006710 258 WGSAFGALAIAMGISNMLFFIGT 280 (634)
Q Consensus 258 w~~~f~~~~~~~~i~~~~~~~~~ 280 (634)
|...|++..+..+++.+++....
T Consensus 412 W~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 412 WDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred CcchHHHHHHHHHHHHHHHHHHH
Confidence 99999988777766666555443
No 103
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.75 E-value=1.3e-16 Score=161.44 Aligned_cols=151 Identities=13% Similarity=0.058 Sum_probs=137.5
Q ss_pred HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCC
Q 006710 99 VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGS 178 (634)
Q Consensus 99 ~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (634)
.++-++++.|++...+.+...+..|+.|.+.||+ |+|-.+++|.++....++++++.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg---------------------- 156 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFG---------------------- 156 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHc----------------------
Confidence 3566778999999999999999999999999998 99999999999999999999997
Q ss_pred CCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccch
Q 006710 179 CEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (634)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw 258 (634)
.++++++++|.++|+|.+....+..++++|.||++.. |++.+|+.--...+|-.+||.++|.+-+..|.
T Consensus 157 ------~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk 225 (464)
T KOG3764|consen 157 ------NSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGK 225 (464)
T ss_pred ------chhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCC
Confidence 6788999999999999999999999999999998874 89999998889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccc
Q 006710 259 GSAFGALAIAMGISNMLFFIGTPLY 283 (634)
Q Consensus 259 ~~~f~~~~~~~~i~~~~~~~~~~~~ 283 (634)
..+|.+.++.+++-..+-++..+.+
T Consensus 226 ~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 226 SAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred cCcHHHHHHHHHHHHHHHHheeCcc
Confidence 9999999988887777766655443
No 104
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.73 E-value=6.8e-15 Score=154.50 Aligned_cols=394 Identities=10% Similarity=0.014 Sum_probs=214.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 006710 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (634)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~ 147 (634)
.+..+......+...+++-...++.+.+++++.|+|.++.|.+.+...+...+.+|+.|.++||+ |.||-++....+..
T Consensus 6 ~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~ 84 (412)
T PF01306_consen 6 NKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILL 84 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHH
Confidence 34567777777777777777788999999999999999999999999999999999999999998 97666554443332
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHH----HHHhhhchhhhHHHHhhccCCCCCcch
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYI----TGFGAAGIRPCVSSFGADQFDERSKDY 223 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~g~g~g~~~~~~~~~~ad~~~~~~~~~ 223 (634)
+...........|.+. .| ++++.++ .++......|..-++..+..-.
T Consensus 85 ~l~~pff~~v~~pll~---------------------~n---~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~----- 135 (412)
T PF01306_consen 85 LLFGPFFIYVFGPLLQ---------------------SN---FWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRR----- 135 (412)
T ss_dssp HTCHHHHHHTHHHHHH---------------------TT----HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHH---------------------HH---HHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH-----
Confidence 2222222111111111 11 1222222 2333333344444444322111
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHH
Q 006710 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAA 303 (634)
Q Consensus 224 ~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a 303 (634)
.+-=+|--.+...+|.+++..++|++.+ .+-+..||+.....++..++.+..++...++.+..+
T Consensus 136 ---~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~------------ 199 (412)
T PF01306_consen 136 ---NGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVAD------------ 199 (412)
T ss_dssp ---HSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SST------------
T ss_pred ---hcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhc------------
Confidence 1122233445677999999999999876 455678887665544444443333222111100000
Q ss_pred HhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHH
Q 006710 304 FRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPA 383 (634)
Q Consensus 304 ~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~ 383 (634)
... ..+++.+..+.. +.-..|++...+.+..
T Consensus 200 ------------------~~~-----------~~~~~~~~~~~~--------------------~l~k~~~fw~~~l~v~ 230 (412)
T PF01306_consen 200 ------------------ALG-----------AKKDKVSLKDVL--------------------SLFKMRNFWFFVLFVI 230 (412)
T ss_dssp ------------------TSS-----------S------HHHHH--------------------HHTTSHHHHHHHHHHH
T ss_pred ------------------ccc-----------cCCCCCcHHHHH--------------------HHhcchhHHHHHHHHH
Confidence 000 000000000000 0011223333333333
Q ss_pred HHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHH
Q 006710 384 CTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGL 463 (634)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~ 463 (634)
.....|..+.|....+.... ..+...+ +...+.+..+..+.-.+...+..++++|++.| ..+.++.
T Consensus 231 g~~~~Y~vfdqqf~~y~~~~-f~~~~~g--~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k-----------~~Lllag 296 (412)
T PF01306_consen 231 GVAAIYDVFDQQFPIYFASF-FQSAGQG--NQMYGYLWSVQVFLEALMMFFSPWLINRIGAK-----------NLLLLAG 296 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-SSSHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcccccC--hhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH-----------hHHHHHH
Confidence 33334444444333222210 0000000 00112222223333334444444554444444 4455555
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHH
Q 006710 464 AVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYA 543 (634)
Q Consensus 464 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~ 543 (634)
+++.+=....++.. +.+++++.=.+.++-..+......-|+.+.+|+++.++...+.
T Consensus 297 ~i~~iRi~~~~~~~-----------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~ 353 (412)
T PF01306_consen 297 VIMAIRIIGSGFAT-----------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVG 353 (412)
T ss_dssp HHHHHHHHHHHT-------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHH
T ss_pred HHHHHHHHHHhhhc-----------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHH
Confidence 55555444444332 5677788888899999999999999999999999999888884
Q ss_pred -HHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhccce
Q 006710 544 -ALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYK 611 (634)
Q Consensus 544 -~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~ 611 (634)
++..+++..+.+.+.|.+.+..| ++..|++++.+.++..++..+..++.+
T Consensus 354 ~~~~~~~~~~i~s~~~G~lyd~~G------------------~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 354 FQFAKQIGIIILSPLAGYLYDRIG------------------FQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHHHHHHHHHHHhhhHHhhHhhcC------------------cHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 68889999999999998877443 456899999888877777777665544
No 105
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.73 E-value=1.1e-15 Score=166.08 Aligned_cols=357 Identities=13% Similarity=0.065 Sum_probs=227.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhh----hccchhHH-HHHHHHHHHHHHHHH
Q 006710 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLAD----AYLGRYWT-IAIFTTIYLAGLTGI 153 (634)
Q Consensus 79 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsD----r~~GRr~~-i~~~~~~~~~~~~~~ 153 (634)
+...+.......+++.|+++.+|+++..++.+.....+..++..|+.|.++| |+ ||||. ++++.++..++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHHh
Confidence 5555666666678899999999999999999999999999999999999999 66 97665 446777777776666
Q ss_pred HHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHH
Q 006710 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (634)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 233 (634)
.... | .+.+.......+.+..++..++.........++.+|+.+++++ |.+..++
T Consensus 90 f~~~------p--------------~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~-----R~~l~~~ 144 (428)
T PF13347_consen 90 FSPP------P--------------AGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE-----RTRLSSW 144 (428)
T ss_pred hccc------c--------------chhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh-----hhhHHHH
Confidence 6430 0 0001112334456666677899899999999999999986542 8898888
Q ss_pred HHHHHHHHHHHHHHHHHHHhh----c---cchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhh
Q 006710 234 FYLSVTVGAIVAFTLVVYIQM----E---HGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRK 306 (634)
Q Consensus 234 ~~~~~~lg~~~~p~i~~~l~~----~---~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~ 306 (634)
-.....+|..+...+.+.+.+ . .+|++.+++.+++.++..++.....|+...+.++.++
T Consensus 145 ~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~-------------- 210 (428)
T PF13347_consen 145 RMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEK-------------- 210 (428)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccccc--------------
Confidence 777777777655555544432 1 1588887777766666555555444431100000000
Q ss_pred hcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHH
Q 006710 307 RHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTI 386 (634)
Q Consensus 307 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~ 386 (634)
..++. ..++... ++ |.+...+...+...
T Consensus 211 ---------------------------------~~~~~--------------~~~~~~~----~n-r~~~~l~~~~~~~~ 238 (428)
T PF13347_consen 211 ---------------------------------KISLR--------------DSLRSLF----RN-RPFRILLLAFFLQW 238 (428)
T ss_pred ---------------------------------ccccc--------------cchhhhc----cc-chHHHHHHHHHHHH
Confidence 00000 0000000 01 11111221212221
Q ss_pred HHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHH
Q 006710 387 MLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVS 466 (634)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~ 466 (634)
..+........++..+..+.+. ..+.+.....+..++..|+..++.+|+++|.. +..+.++.
T Consensus 239 ~~~~~~~~~~~y~~~~vl~~~~-------~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~-----------~~~~~~~~ 300 (428)
T PF13347_consen 239 LAFALMNTFLPYYFTYVLGNEG-------LISIFMLIFFVASIVGSPLWGRLSKRFGKKKV-----------YIIGLLLA 300 (428)
T ss_pred hhhhhhhhHHHHHHHHHhcCch-------hhHHHHHHHHHHHHHHHHHHHHHHHHccceee-----------hhhhHHHH
Confidence 2222211121222222222211 12333445566677788888888888877743 67777877
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-------hhHHHH
Q 006710 467 ILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPD-------AMKSIG 539 (634)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~-------~~rg~~ 539 (634)
+++.++..+... .+.+++.+..++.|++.+......++...|..+. +..|..
T Consensus 301 ~~~~~~~~~~~~---------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~ 359 (428)
T PF13347_consen 301 ALGFLLLFFLGP---------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMY 359 (428)
T ss_pred HHHHHHHHHHHh---------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHH
Confidence 777777665541 1567777888899999999999999999988873 457999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhcccC
Q 006710 540 SAYAALAGGLGCFAASILNSIIKSVTG 566 (634)
Q Consensus 540 ~g~~~~~~~ig~~lg~~l~~~v~~~~~ 566 (634)
.|++++...++..++..+.+.+....|
T Consensus 360 ~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 360 FSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999998877554
No 106
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.73 E-value=6.1e-14 Score=141.22 Aligned_cols=349 Identities=15% Similarity=0.109 Sum_probs=235.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 006710 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (634)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~ 147 (634)
|--+..++++.+--|-...++- .+...+.+++|.|.++++.+.++-.+...+..++..+++.|+ |..|.+..++++.+
T Consensus 11 ~~li~gIvlia~NLR~~itsvg-PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~ 88 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVG-PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIA 88 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhh-hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHH
Confidence 4445555555566666665544 456678999999999999999999999999999999999998 99999999999888
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
+|.++=.. .+...++.+-.+.|.|.+......++.+-+-||++.
T Consensus 89 ~G~~iR~~-----------------------------~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~------- 132 (395)
T COG2807 89 AGILIRSL-----------------------------GGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV------- 132 (395)
T ss_pred HHHHHHhc-----------------------------ccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-------
Confidence 88766554 345778888899999999999999999999999874
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcc-chHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhh
Q 006710 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEH-GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRK 306 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~~p~i~~~l~~~~-gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~ 306 (634)
+..+++|..+.++|+++++.+...+.++. ||+....+-+...++++++++--..+++....+.+.
T Consensus 133 ~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~~~~~~~~~-------------- 198 (395)
T COG2807 133 GLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALREQAASIATKL-------------- 198 (395)
T ss_pred hhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccccccccccccc--------------
Confidence 88999999999999999999999988877 799988777777766666654321111000000000
Q ss_pred hcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHH
Q 006710 307 RHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTI 386 (634)
Q Consensus 307 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~ 386 (634)
.+ +..-|+ +.......+.+=+...
T Consensus 199 ----~~--------------------------------------------~~~vw~--------~~~aW~vtLfmGlqS~ 222 (395)
T COG2807 199 ----VS--------------------------------------------VRKVWR--------SPLAWQVTLFMGLQSL 222 (395)
T ss_pred ----cc--------------------------------------------cccccc--------CchhHHHHHHHHhhHH
Confidence 00 001111 1111112222234566
Q ss_pred HHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHH
Q 006710 387 MLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVS 466 (634)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~ 466 (634)
.+|..+.+++..+.++. ++.. ..+.+..+..+..+......-.+.+| + .+.+........++
T Consensus 223 ~~Y~~~~WLP~ili~~G--~sa~------~aG~llsl~~l~~~~~~ll~P~la~R---~-------~n~r~~~~~~~~~~ 284 (395)
T COG2807 223 LYYIVIGWLPAILIDRG--LSAA------EAGSLLSLMQLAQLPTALLIPLLARR---S-------KNQRPLVVLALLLM 284 (395)
T ss_pred HHHHHHHHHHHHHHHcC--CCHH------HhhhHHHHHHHHHHHHHHHHHHHHHH---h-------cccchHHHHHHHHH
Confidence 77888888887776543 3322 23333333333333333333333332 1 12334445555556
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHH
Q 006710 467 ILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAP-DAMKSIGSAYAAL 545 (634)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P-~~~rg~~~g~~~~ 545 (634)
.++.+.+.+.... ..++| .+++|+|.+..+|..+.++....+ ++..+.-+|..+.
T Consensus 285 l~G~~G~~~~P~~--------------------~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg 340 (395)
T COG2807 285 LVGLVGLLLAPGQ--------------------LPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQG 340 (395)
T ss_pred HHHHHHHHHhhhh--------------------HHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhh
Confidence 5665555444311 13334 367899999999999988887654 4456667778888
Q ss_pred HhHHHHHHHHHHHHHhhcccC
Q 006710 546 AGGLGCFAASILNSIIKSVTG 566 (634)
Q Consensus 546 ~~~ig~~lg~~l~~~v~~~~~ 566 (634)
...+-..+||.+.|.+.+.++
T Consensus 341 ~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 341 VGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred hhHHHHhhhhhhHhHHHHhcC
Confidence 888888899999999998776
No 107
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.73 E-value=4.7e-14 Score=144.14 Aligned_cols=151 Identities=15% Similarity=0.080 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
+..+...-+...+.. .....+.+++++.++++..+++++...+..++.++.+..|++.+|+ |+|+.++.++.++++|.
T Consensus 15 ~v~~t~lFfl~G~~~-~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 15 FVLLTSLFFLWGFIT-CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGA 92 (422)
T ss_pred HHHHHHHHHHHHHHh-hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHH
Confidence 333433333433433 4566788899999999999999999999999999999999999998 99999999999999998
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
.+..-++. ..++..++++.++.|.|.+..+....++++.+.+++. -..-
T Consensus 93 ~lF~pAa~-------------------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~r 141 (422)
T COG0738 93 ALFWPAAS-------------------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFR 141 (422)
T ss_pred HHHhhhhh-------------------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHH
Confidence 88864422 1677899999999999999999999999999999976 5666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQM 254 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~ 254 (634)
+++.+....+|+.++|.+++++..
T Consensus 142 lnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 142 LNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHH
Confidence 788888889999999999988766
No 108
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.72 E-value=3.3e-15 Score=150.50 Aligned_cols=117 Identities=15% Similarity=0.088 Sum_probs=105.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCC
Q 006710 102 KSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEP 181 (634)
Q Consensus 102 ~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (634)
.+..-+|.+-+.|.+...+.++++|.+|||+ |||+++++|++..++...+.+++
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S------------------------- 118 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALS------------------------- 118 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHH-------------------------
Confidence 3445689999999999999999999999998 99999999999998888888876
Q ss_pred ccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 182 AKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (634)
Q Consensus 182 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~ 254 (634)
.|+..++++|++.|+..|-. ..+.++++|.+++++ |+.+++....+..+|..+||+++|++..
T Consensus 119 ---~~F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 119 ---RNFAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred ---HHHHHHHHHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 67777778899999998874 678899999999998 9999999999999999999999999987
No 109
>PRK11462 putative transporter; Provisional
Probab=99.72 E-value=5.3e-14 Score=153.97 Aligned_cols=173 Identities=10% Similarity=0.056 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc---cchhHHHH-HHHHHHHHHHH
Q 006710 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTIA-IFTTIYLAGLT 151 (634)
Q Consensus 76 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~---~GRr~~i~-~~~~~~~~~~~ 151 (634)
+..+..++.+..+..++..|.++.+|+++..++.+..+.-+.-++.-|+.|.++||. +||||..+ ++.+.+.++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 445556666767778899999999999999999999999999999999999999973 49876554 56666776666
Q ss_pred HHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHH
Q 006710 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (634)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 231 (634)
++... |... .......+++.-++..++.........++.+|+.+..++ |.+..
T Consensus 96 llf~~---p~~s-------------------~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~e-----Rt~l~ 148 (460)
T PRK11462 96 LAYST---PDLS-------------------MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQ-----RISLQ 148 (460)
T ss_pred HHHhC---CCCC-------------------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHH-----HHHHH
Confidence 55543 1110 012344455555667888888888888999999885443 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-------cchHHHHHHHHHHHHHHHHH
Q 006710 232 NFFYLSVTVGAIVAFTLVVYIQME-------HGWGSAFGALAIAMGISNML 275 (634)
Q Consensus 232 ~~~~~~~~lg~~~~p~i~~~l~~~-------~gw~~~f~~~~~~~~i~~~~ 275 (634)
++...+.++|..+++.+...+... .+|+....+.+++.++...+
T Consensus 149 s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i 199 (460)
T PRK11462 149 SWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAF 199 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 998888888888887765544332 24665555544444344333
No 110
>PTZ00207 hypothetical protein; Provisional
Probab=99.72 E-value=1.2e-13 Score=152.39 Aligned_cols=176 Identities=9% Similarity=-0.012 Sum_probs=129.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
.++|..+........+... .|++..+ ...+++++|+|.++.+++.++... ..++.++.|+++||+ |||++++++.+
T Consensus 24 ~~Rw~~lva~~~~~~~~g~-~y~fsv~-s~~L~~~lgls~~~l~~i~svg~~-~g~~~lp~G~L~Dr~-G~R~vllig~l 99 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSF-MYAFNLI-SGAMQARYNLTQRDLSTITTVGIA-VGYFLLPYSFIYDYL-GPRPIFVLSMT 99 (591)
T ss_pred cchHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHhCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 4556645544444444333 3344443 456889999999999998877443 445677789999998 99999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
++.++.++++++... ... .+.+.+++.|++.|+|.+...+.....+.++|| ++
T Consensus 100 l~~iG~ll~ala~~~--~i~--------------------~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~---- 152 (591)
T PTZ00207 100 VFCLGTLLFALTFQE--VIE--------------------GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN---- 152 (591)
T ss_pred HHHHHHHHHHHHhcc--ccc--------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh----
Confidence 999999999886210 000 367889999999999999988888899999997 56
Q ss_pred hhhhhHHHHHHHHHHHHHHH-HHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q 006710 225 THLDRFFNFFYLSVTVGAIV-AFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~-~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 275 (634)
|+...++...+..+|+++ +++..+++.+ +|+..|++.++..++..++
T Consensus 153 --RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 153 --RGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHH
Confidence 999999999999999975 5555555543 5777676666554444333
No 111
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.70 E-value=4.7e-14 Score=152.96 Aligned_cols=149 Identities=12% Similarity=0.065 Sum_probs=125.6
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccC
Q 006710 98 YVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLG 177 (634)
Q Consensus 98 ~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (634)
++.|....+.+.+.++|.++++++.+++|.|.||+ .-.+.+....+++.+..++....
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~--------------------- 131 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV--------------------- 131 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 56788888999999999999999999999999998 86666666666665554444433
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh----
Q 006710 178 SCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ---- 253 (634)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~---- 253 (634)
.+.+.+++.|++.|+..++.+|+...+++.+|.+++ |+.-+++++.+..+|..+|.+++..+.
T Consensus 132 -------~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~ 198 (495)
T KOG2533|consen 132 -------HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNG 198 (495)
T ss_pred -------hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcC
Confidence 688999999999999999999999999999999999 999999999999999999999887753
Q ss_pred --hccchHHHHHHHHHHHHHHHHHHHHhcc
Q 006710 254 --MEHGWGSAFGALAIAMGISNMLFFIGTP 281 (634)
Q Consensus 254 --~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (634)
...||+|.|++.+++.++..++.++..|
T Consensus 199 ~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 199 SGGLAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred CCCcCCceeehhHHHHHHHHHHheEEEEec
Confidence 3568999999999877666655555444
No 112
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.70 E-value=1.9e-13 Score=145.85 Aligned_cols=382 Identities=14% Similarity=0.101 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 006710 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (634)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~ 153 (634)
+....++..+.+-...++++.|+.+ .|+|.+|.|.+.+...+...+.++++|+++||...+||.+.+..++..+.....
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 4555566666666667888999976 679999999999999999999999999999998446777777666555544333
Q ss_pred HHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHH
Q 006710 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (634)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 233 (634)
... .+.+.+++..++..+......|...++.-+...++..+ =+|-|..
T Consensus 86 ~~~----------------------------~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~~~--YG~iRlw-- 133 (400)
T PF03825_consen 86 AFS----------------------------SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRGKD--YGRIRLW-- 133 (400)
T ss_pred HHh----------------------------ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccCC--CCcchhh--
Confidence 332 34566666666777777777888888777766533211 1233333
Q ss_pred HHHHHHHHHHHHHHH-HHHHhhcc---chHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcc
Q 006710 234 FYLSVTVGAIVAFTL-VVYIQMEH---GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHA 309 (634)
Q Consensus 234 ~~~~~~lg~~~~p~i-~~~l~~~~---gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~ 309 (634)
.++|-.++... ++++.... +..+.+++.++..++... +.+..+..+.++..+...
T Consensus 134 ----GSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~-~~l~lp~~~~~~~~~~~~---------------- 192 (400)
T PF03825_consen 134 ----GSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAG-FALFLPKTPPKRSAKESV---------------- 192 (400)
T ss_pred ----hhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHH-HHHhCCCCccccccCCCc----------------
Confidence 33444444322 22222222 223345554443322222 112222211000000000
Q ss_pred cccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHH
Q 006710 310 AFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLN 389 (634)
Q Consensus 310 ~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~ 389 (634)
+ +....+. ++.+ ++++.+.-.+..++.+....
T Consensus 193 ----------------------------~-~~~~~~~--------------~~ll-----k~~~~~~Fll~~~l~~~~~~ 224 (400)
T PF03825_consen 193 ----------------------------K-KLLGLDA--------------LKLL-----KNPRFLVFLLAAFLIGISHA 224 (400)
T ss_pred ----------------------------c-cccchHH--------------HHHh-----cCccHHHHHHHHHHHHHHHH
Confidence 0 0000000 0000 01111111111111122121
Q ss_pred HHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHH
Q 006710 390 VILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILS 469 (634)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~ 469 (634)
. +..+.+.+..+..+.... ..+....+..+.=+. .-...+|+.+| ++.++.+.++.+..++=
T Consensus 225 ~-~~~f~~~yl~~~gg~~~~------~~g~~~~l~~~aEi~----~f~~~~~~~~r-------~g~~~ll~~a~~~~~vR 286 (400)
T PF03825_consen 225 A-YYTFFSIYLQELGGYSGS------TIGILWALGVVAEIP----FFFFSGRFLKR-------FGIKWLLLLALVAYAVR 286 (400)
T ss_pred H-HHHHHHHHHHHcccchhh------HHHHHHHHHHHHHHH----HHHHHHHHHHh-------cCHHHHHHHHHHHHHHH
Confidence 1 222222232221111100 111111122222122 22334555666 55666677777766665
Q ss_pred HHHHHHHHHHHHhhhhhcCccccccCCCCcchHHH----HHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHH
Q 006710 470 VIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYW----LLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAAL 545 (634)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~----lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 545 (634)
..+++... .+.++ +...-++.|+..++.......|+.+.+|++.|++++++++.
T Consensus 287 ~~l~a~~~----------------------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~ 344 (400)
T PF03825_consen 287 WLLYAYFS----------------------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSA 344 (400)
T ss_pred HHHHHHhc----------------------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHH
Confidence 55555442 02222 22223578999999999999999999999999999999885
Q ss_pred -HhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 006710 546 -AGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYR 609 (634)
Q Consensus 546 -~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~ 609 (634)
..++|..+|..+.|.+.+..+ .++.- .+..++.+.+++.++..++++++.|+
T Consensus 345 ~~~Glg~~iG~~igG~l~~~~g--~~~~~----------~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 345 LSFGLGGAIGSLIGGWLYDAFG--ARGMF----------DWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHhhHHHHHHHHHHHHHHHHhc--chhhh----------hHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 468999999999998887433 11110 12335566666666666666666543
No 113
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.70 E-value=3.8e-16 Score=160.78 Aligned_cols=141 Identities=16% Similarity=0.179 Sum_probs=106.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCC
Q 006710 102 KSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEP 181 (634)
Q Consensus 102 ~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (634)
++....+.+..+..++.++++++.||++||+ |||+++...+++.+++++.++++. |.+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~---------------------~~~ 138 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSV---------------------GTT 138 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCC---------------------CCC
Confidence 5567788899999999999999999999997 999999999999999998766641 122
Q ss_pred ccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHH----HHHHHHHHHHHHHHHHhh---
Q 006710 182 AKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL----SVTVGAIVAFTLVVYIQM--- 254 (634)
Q Consensus 182 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~----~~~lg~~~~p~i~~~l~~--- 254 (634)
+...-+.++...|+++|+|.|+-+|+..+..+|..-.+. ||...+.... +.-.|+.++-++.+-...
T Consensus 139 ~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~ 212 (538)
T KOG0252|consen 139 SPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFN 212 (538)
T ss_pred CCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCC
Confidence 222456788899999999999999999999999999888 8888777433 344444444444333211
Q ss_pred --------ccchHHHHHHHHHHHH
Q 006710 255 --------EHGWGSAFGALAIAMG 270 (634)
Q Consensus 255 --------~~gw~~~f~~~~~~~~ 270 (634)
..-||..|.+.++..+
T Consensus 213 ~~~~~~~ld~vWRl~~glg~vpa~ 236 (538)
T KOG0252|consen 213 GPSTYPHLDGVWRIIFGLGAVPAL 236 (538)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHH
Confidence 1238888777665443
No 114
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.61 E-value=3.8e-14 Score=156.70 Aligned_cols=182 Identities=13% Similarity=0.034 Sum_probs=136.1
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
+++|+.........++..+.+|++..++|.|+++.+|++..+..+......++..++.+++|+++||+ |||+++.++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~ 324 (490)
T PRK10642 246 TKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSV 324 (490)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHH
Confidence 34566555555555667788999999999999999999998888888888899999999999999998 99999888876
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
+..++.+++..... . .+...+++++++.|++.+...+....+..|.+|++.
T Consensus 325 ~~~~~~~~~~~~~~-----~--------------------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~---- 375 (490)
T PRK10642 325 ALFVLAIPAFILIN-----S--------------------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI---- 375 (490)
T ss_pred HHHHHHHHHHHHHh-----C--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc----
Confidence 55444333222100 0 245667788888888887777888889999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHHHHH
Q 006710 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~ 278 (634)
|++++++.+....+++.++|.+.+++.+..+ |+..+++..+..++.++..++
T Consensus 376 --Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 376 --RYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999998555556667889999999887654 676666555554444444443
No 115
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.59 E-value=4.1e-11 Score=130.53 Aligned_cols=87 Identities=17% Similarity=0.220 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCc
Q 006710 502 AYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNIN 581 (634)
Q Consensus 502 ~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~ 581 (634)
.+.+.+.-++.|+..+-..+..-++..+..|++..+...|++.+.....+++||++.+.+.+.+++
T Consensus 380 ~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~-------------- 445 (477)
T PF11700_consen 380 PWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS-------------- 445 (477)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------------
Confidence 344445556789999999999999999999999999999999999999999999999999887651
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHH
Q 006710 582 TGRFDYLYWLLAVLSVINFCAFLY 605 (634)
Q Consensus 582 ~~~~~~~f~~~a~~~~v~~~~~~~ 605 (634)
..+-++.+.++.++++++.+.
T Consensus 446 ---~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 446 ---QRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred ---chhHHHHHHHHHHHHHHHHhh
Confidence 234466667766766666543
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.57 E-value=6.5e-12 Score=133.44 Aligned_cols=365 Identities=12% Similarity=0.101 Sum_probs=224.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc---cchhH-HHHHHHHHHH
Q 006710 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYW-TIAIFTTIYL 147 (634)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~---~GRr~-~i~~~~~~~~ 147 (634)
+--....+..++.+..+..++..|.++.+|+++..+|.+..+.-+.-++.-|+.|.++||. +||+| -++++.+.+.
T Consensus 15 i~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~ 94 (467)
T COG2211 15 IGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFA 94 (467)
T ss_pred HhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHH
Confidence 3344556677778878888999999999999999999999999999999999999999984 48655 5556667777
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
+..+++..+.. . ..+.+....++.-.+.+++.....-...++.+|+.++.++ |
T Consensus 95 i~~~l~F~~p~---~-------------------~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~E-----R 147 (467)
T COG2211 95 IVAVLLFITPD---F-------------------SMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQE-----R 147 (467)
T ss_pred HHHHHHHcCCC---c-------------------ccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHH-----H
Confidence 77777776521 0 0013445556666788999999988899999999876553 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhh-------ccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHH
Q 006710 228 DRFFNFFYLSVTVGAIVAFTLVVYIQM-------EHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVL 300 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~~p~i~~~l~~-------~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (634)
.+..++.....++|..+...+...+.. ..||+....+.+++..+.++..+...++...+..
T Consensus 148 ~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~------------ 215 (467)
T COG2211 148 ASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQ------------ 215 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccc------------
Confidence 999999888888887666655544432 2356655555555544444444433222111000
Q ss_pred HHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhh
Q 006710 301 VAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVP 380 (634)
Q Consensus 301 ~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~ 380 (634)
|.+++ ...++.+.-... ...|.++..+
T Consensus 216 -----------~~~~~----------------------~~~~~~~~~~~~-------------------~~Nrp~~~~l- 242 (467)
T COG2211 216 -----------PTKTG----------------------VKLKLKDSFLLI-------------------FKNRPLLLLL- 242 (467)
T ss_pred -----------cCccc----------------------ccccHHHHHHHH-------------------HccchHHHHH-
Confidence 00000 000000000000 0011111111
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHH-hhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHH
Q 006710 381 IPACTIMLNVILTEFLTLSVQQA-YTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRV 459 (634)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i 459 (634)
+...+++.......+..+++. ..++.. ...+...........++..++..++..++++| +..
T Consensus 243 --~~~l~~~~~~~i~~s~~~yy~~y~lg~~----~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----------~~~ 305 (467)
T COG2211 243 --LMNLLLFIAFNIRGSIMVYYVTYVLGDP----ELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----------KLF 305 (467)
T ss_pred --HHHHHHHHHHHHHhhhhheeEEEEcCCh----HHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----------HHH
Confidence 112222222222223222221 111111 11122222223333344456666666666666 346
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-------
Q 006710 460 GIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAP------- 532 (634)
Q Consensus 460 ~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P------- 532 (634)
.+|.++.+++.+.+.+... -+...+++..++.++|.+...+..++.+.+...
T Consensus 306 ~~~~~~~~i~~~~~~f~~~---------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG 364 (467)
T COG2211 306 LIGLLLLAVGYLLLYFTPA---------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTG 364 (467)
T ss_pred HHHHHHHHHHHHHHHhhcC---------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhC
Confidence 7777777777766665531 245666666688899999999999999888654
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccC
Q 006710 533 DAMKSIGSAYAALAGGLGCFAASILNSIIKSVTG 566 (634)
Q Consensus 533 ~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~ 566 (634)
.+..|..-|.+.+++-+|..++..+.+++....|
T Consensus 365 ~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 365 VRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3556888999999999999999999998877544
No 117
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.52 E-value=1.1e-10 Score=120.74 Aligned_cols=374 Identities=14% Similarity=0.060 Sum_probs=214.0
Q ss_pred HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc-----hh-HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcc
Q 006710 96 MFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG-----RY-WTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (634)
Q Consensus 96 l~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~G-----Rr-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (634)
+..|++++....+..+....+... ..+..|+.||+. + || +-+..+.+++..+..+.+.+...-.- ..
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~-~~---- 78 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAE-SG---- 78 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcc-cc----
Confidence 346788888888888777666554 688999999997 6 55 45566777777776666655332110 00
Q ss_pred cccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 006710 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (634)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~ 249 (634)
.....+.........++..+.|+|.+....+..++++|..|+++ |++..++.+.+.-+|..++.++.
T Consensus 79 -------~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~ 145 (403)
T PF03209_consen 79 -------QQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVF 145 (403)
T ss_pred -------cccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHH
Confidence 00011111222344455578899999999999999999999999 99999999999999999999999
Q ss_pred HHHhhccch-HHHHHHH---HHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCC
Q 006710 250 VYIQMEHGW-GSAFGAL---AIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGK 325 (634)
Q Consensus 250 ~~l~~~~gw-~~~f~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~ 325 (634)
+.+.+.++- |..-.+. .+...+.++..+-..++.+...+.
T Consensus 146 g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~------------------------------------ 189 (403)
T PF03209_consen 146 GRLLDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAA------------------------------------ 189 (403)
T ss_pred HHHccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccC------------------------------------
Confidence 988777663 2221222 122222222221111111110000
Q ss_pred ccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHHHhhhhHHHHHHhh
Q 006710 326 HSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYT 405 (634)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (634)
.+.++..+.+..... .. ..+.+++...+ ++....+++ |..-
T Consensus 190 ----------~~~~~~~f~~a~~~~--------------~~--~~~a~~f~~fl--~l~t~a~~~-----------QD~i 230 (403)
T PF03209_consen 190 ----------AERPRPPFREAWRQV--------------WA--SPQARRFFVFL--FLGTLAFFM-----------QDVI 230 (403)
T ss_pred ----------CCCCCccHHHHHHHH--------------Hh--CCChhHHHHHH--HHHHHHHHh-----------hHHH
Confidence 000011111111111 00 01223322221 111111111 1111
Q ss_pred cccCCCC--cccc---CccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 006710 406 MNTHMGK--LKLP---VTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYR 480 (634)
Q Consensus 406 ~~~~~~~--~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~ 480 (634)
+ ..+++ +..+ +..++.+.....++...+.+++.. || ....+....|.....+++.........
T Consensus 231 L-EPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~---~~-------~~~~~~a~~G~~~~~~~f~lii~a~~~- 298 (403)
T PF03209_consen 231 L-EPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLS---RR-------LGKKRTAALGCLLGALAFALIILAGPL- 298 (403)
T ss_pred c-CCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC-------CCchHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 1 11111 1222 233455555556666666666543 22 222334556777777776554443311
Q ss_pred HhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHH
Q 006710 481 RNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSI 560 (634)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~ 560 (634)
-+.+.+....+++|+|.++......+...+..+++..|..+|.|...+.++..++..+.+.
T Consensus 299 -------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~ 359 (403)
T PF03209_consen 299 -------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGA 359 (403)
T ss_pred -------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1456777888999999999999999999999999999999999999999999999999998
Q ss_pred hhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHH
Q 006710 561 IKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAF 603 (634)
Q Consensus 561 v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~ 603 (634)
+.+... ++..+-....|..+|.+=+++.++++.+.
T Consensus 360 ~~D~~~--------~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 360 LRDLVR--------ALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHH--------HhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 876432 21111012234445655555555554443
No 118
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.50 E-value=2.9e-12 Score=137.52 Aligned_cols=172 Identities=11% Similarity=0.090 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
.+......+.....++....+++.|+++++|++..+++++.+...+...++.+++|+++||+ |||+.+..+.+...+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~ 296 (393)
T PRK15011 218 TLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVCFY 296 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 33333344444445555667889999999999999999988887788888999999999998 99998887766554443
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
..+... .+.+.+++.+++.+++.|...+....+..|.+|+ + |+++
T Consensus 297 ~~~~~~----------------------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~ 341 (393)
T PRK15011 297 AGMLMA----------------------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSA 341 (393)
T ss_pred HHHHHH----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchH
Confidence 333222 3455666778888887777777777888898874 5 7889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
.++++...++|..++|.++|++.+..||+..|++..++.+++++..+.
T Consensus 342 ~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 342 TTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999888899999999999999999889999998877777666655543
No 119
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.49 E-value=1.4e-12 Score=143.27 Aligned_cols=175 Identities=16% Similarity=0.076 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.+|...+..++....++++..++|.|+++++|+|..++++....+.++..++.+++|+++||+ |||+.+.....+..++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHHH
Confidence 477788888888888888889999999999999999999999999999999999999999998 9998776655444433
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
..++.+... .+....++.+++.|++..+..........|.+|++. |++
T Consensus 338 ~~~~~~~~~--------------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~ 385 (467)
T PRK09556 338 FTLGVYQHA--------------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGV 385 (467)
T ss_pred HHHHHHHhc--------------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHH
Confidence 322222100 234455567777776554544444567779999998 999
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhh------------ccchHHHHHHHHHHHHHHHHHHH
Q 006710 230 FFNFFYLSVTV-GAIVAFTLVVYIQM------------EHGWGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 230 ~~~~~~~~~~l-g~~~~p~i~~~l~~------------~~gw~~~f~~~~~~~~i~~~~~~ 277 (634)
+.++.+...++ |+.++|.+.|++.+ ..+|+..|++..++.+++.+..+
T Consensus 386 a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 386 ANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 99999988886 77999999999998 57899999888777666655544
No 120
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.48 E-value=3.6e-13 Score=130.19 Aligned_cols=367 Identities=13% Similarity=0.108 Sum_probs=217.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 006710 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (634)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~ 148 (634)
.+..+.++..|..+++| ---..+..+...+.+++.++..++.+.|..-..+.+.++||+.||.+|-|..-++-+.+..+
T Consensus 44 m~lv~mc~lgfgsyfcy-d~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~ 122 (459)
T KOG4686|consen 44 MALVFMCLLGFGSYFCY-DAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFL 122 (459)
T ss_pred HHHHHHHHhcccceeec-CCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHH
Confidence 34444445555555544 23344667777778888888999999999999999999999999998987766666666677
Q ss_pred HHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhh
Q 006710 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (634)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~ 228 (634)
|.++.+.-.. ....+++.++|++.|+|.-........+..-+|..++ .+
T Consensus 123 GqliFa~Ggi-------------------------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln 171 (459)
T KOG4686|consen 123 GQLIFAAGGI-------------------------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LN 171 (459)
T ss_pred HHHHHHhchH-------------------------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------cc
Confidence 7777765321 0578999999999999998888888999999999999 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhc
Q 006710 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRH 308 (634)
Q Consensus 229 ~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~ 308 (634)
..+++.-....+|..+-..+.+++.+..+-- +-...-..+++.+.+-.+. ....-++. +..+..+.+
T Consensus 172 ~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~---~~~~ghT~LG~~l~~~~~t---------c~~slica-l~lg~~D~r 238 (459)
T KOG4686|consen 172 FVFGLQLSVARLGSTVNFLLMPFLYDTMGRM---FPGVGHTLLGLWLCFEVKT---------CKQSLICA-LSLGLSDDR 238 (459)
T ss_pred chhhHHHHHHHhhceeeeeecHHHHHHHHHh---cccchHHHHHHHHHHHHHH---------HHHHHHHH-HHhhhhhhH
Confidence 9999988888888877777777776544311 1011111111111111000 00000000 000000000
Q ss_pred ccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHH-hHhhHHHHHHH
Q 006710 309 AAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLV-RLVPIPACTIM 387 (634)
Q Consensus 309 ~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~l~~~~~~~~ 387 (634)
.+ +. +...+ ...+ ..| +.++++... ....+.+..+.
T Consensus 239 Ae-----ri-lh~e~-------------------------g~~G-----e~p-------kLtdv~~f~ppfw~~~iicv~ 275 (459)
T KOG4686|consen 239 AE-----RI-LHLEE-------------------------GFLG-----EEP-------KLTDVNTFYPPFWVLVIICVL 275 (459)
T ss_pred HH-----HH-Hhhhc-------------------------Cccc-----CCc-------ccccccccCccHHHHHHHHHH
Confidence 00 00 00000 0000 000 001111110 11112222334
Q ss_pred HHHHHHhhhh---HHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHH
Q 006710 388 LNVILTEFLT---LSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLA 464 (634)
Q Consensus 388 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~ 464 (634)
+++..+...+ .+.+.-.+.+ ...++.+.+...+...+..|+.+.++|+.+++.. .+..+.+
T Consensus 276 yyva~fPFi~lg~~fF~~rfGlS------~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~----------wv~~a~~ 339 (459)
T KOG4686|consen 276 YYVAWFPFITLGPMFFQKRFGLS------AVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW----------WVASACI 339 (459)
T ss_pred HHHHHHHHhhhhHHHHHHhhCCC------hhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh----------hHHHHHH
Confidence 4443333222 2222111111 1122223333344556778999999999998853 2444544
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 006710 465 VSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAA 544 (634)
Q Consensus 465 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~ 544 (634)
...++-..+.+.. .+. .....++|++..+..-..+-.+....|++.-|++-|..+
T Consensus 340 ~tl~~H~~l~Ft~----------------------lsP---y~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~q 394 (459)
T KOG4686|consen 340 LTLLGHSGLFFTF----------------------LSP---YTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQ 394 (459)
T ss_pred HHHHHhhhHHhhh----------------------ccH---HHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHH
Confidence 4444443333322 122 234567888888888889999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhcc
Q 006710 545 LAGGLGCFAASILNSIIKSV 564 (634)
Q Consensus 545 ~~~~ig~~lg~~l~~~v~~~ 564 (634)
..+++|-.+.+.+.+.+.+.
T Consensus 395 sIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 395 SIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred HHHhhhhhHHhhhhheeecC
Confidence 99999999999999988763
No 121
>PRK09952 shikimate transporter; Provisional
Probab=99.48 E-value=3e-12 Score=139.47 Aligned_cols=184 Identities=12% Similarity=-0.005 Sum_probs=135.5
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
+++++.........++..+.+|.+..+++.|+++.+|++......+.....+...++.++.|+++||+ |||++++.+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~ 324 (438)
T PRK09952 246 LRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGAL 324 (438)
T ss_pred HHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHH
Confidence 34555555555566777788899999999999999999988766666666777788889999999998 99999888876
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
+..++.+.+..... .. .....+++..++.+++.+...+...++++|.+|++.
T Consensus 325 ~~~~~~~~~~~~~~-----~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~---- 376 (438)
T PRK09952 325 IGTLSAFPFFMALE-----AQ-------------------SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY---- 376 (438)
T ss_pred HHHHHHHHHHHHHH-----cC-------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch----
Confidence 65544433333210 00 223344445566688888888888999999999988
Q ss_pred hhhhhHHHH-HHHHHHHHHHHHHHHHHHHhhcc--chHHHHHHHHHHHHHHHHHHHHh
Q 006710 225 THLDRFFNF-FYLSVTVGAIVAFTLVVYIQMEH--GWGSAFGALAIAMGISNMLFFIG 279 (634)
Q Consensus 225 ~~r~~~~~~-~~~~~~lg~~~~p~i~~~l~~~~--gw~~~f~~~~~~~~i~~~~~~~~ 279 (634)
|+++.++ +..+..+|+.++|.+.+++.+.. +|...+.+..++.+++.+..+..
T Consensus 377 --r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 377 --RYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred --hHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 9999999 44456689999999999997743 48888877777766666665443
No 122
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.43 E-value=2.2e-12 Score=137.46 Aligned_cols=174 Identities=14% Similarity=0.065 Sum_probs=134.5
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
+++++.++......++....++.+..+++.|+++++|.+..+.+.....+.++..++.+++|+++||+ |||+.+..+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~ 293 (394)
T TIGR00883 215 TKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTV 293 (394)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHH
Confidence 34444567777777788888888889999999999999999999999999999999999999999998 99998876655
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
+..+.......... .. .+...+++..++.|++.+...+...+++.|.+|++.
T Consensus 294 ~~~~~~~~~~~~~~-----~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---- 345 (394)
T TIGR00883 294 LAALLAVPLLMALL-----DS-------------------GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV---- 345 (394)
T ss_pred HHHHHHHHHHHHHh-----cC-------------------CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc----
Confidence 44433211111100 00 244556667788888888889999999999999998
Q ss_pred hhhhhHHHH-HHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHH
Q 006710 225 THLDRFFNF-FYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAM 269 (634)
Q Consensus 225 ~~r~~~~~~-~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~ 269 (634)
|++++++ +..+..+|..++|.++|++.+..| |++.++...++.
T Consensus 346 --~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 346 --RYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred --eeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 8888888 455677899999999999999888 887766655443
No 123
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.43 E-value=9.5e-12 Score=141.63 Aligned_cols=134 Identities=9% Similarity=0.002 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHH
Q 006710 109 NAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQML 188 (634)
Q Consensus 109 ~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (634)
....+..++..++.+++|+++||+ |||++++++.++..++.+++++. .+..
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~----------------------------~s~~ 649 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFG----------------------------NSES 649 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHH----------------------------ccHH
Confidence 334456678889999999999998 99999999998888887777665 3445
Q ss_pred HHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Q 006710 189 YLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (634)
Q Consensus 189 ~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~ 268 (634)
.+++.+++.|++.++..+...++++|++|++. |++++++.+....+|+++||.+++++... +...+|++.+++
T Consensus 650 ~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~ 722 (742)
T TIGR01299 650 AMIALLCLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAA 722 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHH
Confidence 56677778888888888999999999999999 99999999999999999999999988664 455677776666
Q ss_pred HHHHHHHHHH
Q 006710 269 MGISNMLFFI 278 (634)
Q Consensus 269 ~~i~~~~~~~ 278 (634)
.+++.++.++
T Consensus 723 lll~~ll~~~ 732 (742)
T TIGR01299 723 LACGGLLALK 732 (742)
T ss_pred HHHHHHHHHh
Confidence 5555554443
No 124
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.42 E-value=6.6e-12 Score=133.62 Aligned_cols=190 Identities=13% Similarity=0.040 Sum_probs=145.9
Q ss_pred ccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccch-hHH
Q 006710 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR-YWT 138 (634)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GR-r~~ 138 (634)
....+.+||.+++..+.+++..+.++...+..-.|+++ +.+.+.+..|+++++..++..++.|..|+.+.|. |+ |+-
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~P 104 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKP 104 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccC
Confidence 45567899999999999999998888777777788875 4677888899999999999999999999999997 74 777
Q ss_pred HHHHHHHHHHHHHHH-HHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCC
Q 006710 139 IAIFTTIYLAGLTGI-TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (634)
Q Consensus 139 i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~ 217 (634)
++.+.++.++|.++. .+... |. ...+.++++|++.|+|.|. .+..-+|+++...
T Consensus 105 li~s~ii~~~g~llY~~l~~~-----~~-------------------~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~ 159 (488)
T KOG2325|consen 105 LIVSFLIAIIGNLLYLALAYV-----PN-------------------GVKYLMLVARILTGVGVGN-FAVLRAYIADAST 159 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-----cc-------------------chHHHHHHHHHHcCcCccc-HHHHHHHHHhccC
Confidence 788888888888887 44321 11 3678899999999999777 4678899999888
Q ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh----hc---------cchHHHHHHHHHHHHHHHHHHHHhccc
Q 006710 218 ERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ----ME---------HGWGSAFGALAIAMGISNMLFFIGTPL 282 (634)
Q Consensus 218 ~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~----~~---------~gw~~~f~~~~~~~~i~~~~~~~~~~~ 282 (634)
.++ |.++++....+..+|..+||.+...+. .. .-+..+-|+.++..++.++++.+..++
T Consensus 160 ~~d------R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 160 VED------RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred ccc------hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 888 999998877777777777776654332 11 113456667776666666665555444
No 125
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.42 E-value=5.7e-12 Score=137.92 Aligned_cols=178 Identities=17% Similarity=0.137 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-chhHHH-HHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYL-GRYWTI-AIFTTIYL 147 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~-GRr~~i-~~~~~~~~ 147 (634)
.++...+..++.....+++..++|.|++++.|++..+++.....+.++..++.+++|+++||+. |||+.. .....+..
T Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~ 333 (452)
T PRK11273 254 LLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVT 333 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHH
Confidence 4677777777777888888899999999999999999999999999999999999999999972 334322 22223333
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
++.+.+.+. +. .+....++..++.|.+..........+..|.+|++. |
T Consensus 334 ~~~~~~~~~-------~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~ 381 (452)
T PRK11273 334 IATIVYWLN-------PA-------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------A 381 (452)
T ss_pred HHHHHHHHh-------cc-------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------h
Confidence 333222221 00 233334444555555444433444556789999998 9
Q ss_pred hhHHHHHHHHHHHHHHH-HHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHh
Q 006710 228 DRFFNFFYLSVTVGAIV-AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~-~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 279 (634)
++++++.+...++|+.+ +|.+.|++.+..||+..|++..+..+++++.....
T Consensus 382 g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 382 GTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888665 79999999999999999988877766665554433
No 126
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.40 E-value=2.3e-11 Score=130.77 Aligned_cols=165 Identities=13% Similarity=0.067 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhh
Q 006710 80 AERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATM 159 (634)
Q Consensus 80 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~ 159 (634)
+..++++.+..+++.|+.+ .|. .+.++..+.+.++..++.++.|+++||+ |||+.+..+..+..++..++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~--- 299 (399)
T PRK05122 227 LASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLA--- 299 (399)
T ss_pred HHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh---
Confidence 3455666677778888764 455 3456667788888889999999999998 99999988888777776666554
Q ss_pred cccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHH
Q 006710 160 KVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVT 239 (634)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~ 239 (634)
.+.+.+++++++.|++.+...+.......|.+|++. |++..++++...+
T Consensus 300 -------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~ 348 (399)
T PRK05122 300 -------------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLD 348 (399)
T ss_pred -------------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHH
Confidence 345566777889999999888888888889999888 9999999999999
Q ss_pred HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccc
Q 006710 240 VGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPL 282 (634)
Q Consensus 240 lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 282 (634)
+|..++|.+.|++.+..||++.|++.+++.+++++......++
T Consensus 349 ~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 349 LSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999998999999998887777766665554443
No 127
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.40 E-value=9.6e-12 Score=131.71 Aligned_cols=169 Identities=15% Similarity=0.076 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
.+......++..+.......+.+.|. +++|.+..+.+...+.+.++..++.++.|+++||+ |||+.+.++.++..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 284 (377)
T TIGR00890 207 FWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGM 284 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHH
Confidence 33344444444455544555556664 56899999999999999999999999999999998 99999999888888777
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
.++.+... .+...+++..++.|++.+...+..+++..|.+|+++ |++.
T Consensus 285 ~~~~~~~~--------------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~ 332 (377)
T TIGR00890 285 AAMLFIPM--------------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAAN 332 (377)
T ss_pred HHHHHccc--------------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhH
Confidence 66655310 122334455677888888888888899999999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHH
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISN 273 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~ 273 (634)
+++++...++|..++|.+.+++.+..||++.|++.+++.++++
T Consensus 333 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 333 YGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999988776655543
No 128
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.39 E-value=2.8e-11 Score=128.63 Aligned_cols=163 Identities=10% Similarity=0.041 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhh
Q 006710 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCAT 158 (634)
Q Consensus 79 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~ 158 (634)
++..........+++.|+.+++|.+..+.++......+...++.+++|+++||+ |||+++.++.++..++.......
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~-- 285 (375)
T TIGR00899 209 TLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAAD-- 285 (375)
T ss_pred HHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHH--
Confidence 333333444556778899999999999999888887777788889999999998 99999888776555444333332
Q ss_pred hcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHH
Q 006710 159 MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSV 238 (634)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~ 238 (634)
.+.+.+++.+++.|++.+...+....+..|.+|+ + |++++++++...
T Consensus 286 --------------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~ 332 (375)
T TIGR00899 286 --------------------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNTG 332 (375)
T ss_pred --------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHHH
Confidence 3556666777888998888888888889998875 3 569999999999
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q 006710 239 TVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 239 ~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 277 (634)
++|..++|.+++++.+..||+..|++.++..+++.+...
T Consensus 333 ~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 333 RVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 999999999999999989999999988877666665543
No 129
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.39 E-value=2.3e-11 Score=127.19 Aligned_cols=171 Identities=20% Similarity=0.233 Sum_probs=148.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhH-HHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYW-TIAIFTTIYLAG 149 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~-~i~~~~~~~~~~ 149 (634)
++......++..........+.+.|+.+.+|.+..+.++......++..++.++.|+++||+ |||+ .+.++.++..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ 255 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALG 255 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHH
Confidence 34444555666666677777888888888899999999999999999999999999999998 9999 999999888888
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
.+.+... .+...+++..++.|++.+...+...++..|.+|+++ |++
T Consensus 256 ~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~ 301 (352)
T cd06174 256 LLLLALA----------------------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGT 301 (352)
T ss_pred HHHHHHh----------------------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHH
Confidence 8777765 456777888899999999999999999999999988 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (634)
.+++++...++|..++|.+.+++.+..+|++.|++.++..+++.+..
T Consensus 302 ~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 302 ASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999988999999998888776666554
No 130
>PRK03699 putative transporter; Provisional
Probab=99.39 E-value=2e-11 Score=131.09 Aligned_cols=171 Identities=15% Similarity=0.144 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.++...+..++...+.+++..++|.|+++++|+|..+++...+.+.++..++.+++|+++||+ |||+++.....+..+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~ 284 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVL 284 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHH
Confidence 355555566666677788889999999999999999999999999999999999999999998 9999888777665554
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
..+.... .+...+.+..++.|++.+...+...++..|..|.+ +++
T Consensus 285 ~~~~~~~----------------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~ 329 (394)
T PRK03699 285 MYLFVNT----------------------------DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPK 329 (394)
T ss_pred HHHHHHc----------------------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHH
Confidence 4444332 23444555667888888888888888888877643 456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (634)
..++.....++|..++|.+.|++.+..|++..|++..++.+++.++.
T Consensus 330 ~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 330 LVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMC 376 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHH
Confidence 67777778889999999999999999999999887776665555443
No 131
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.38 E-value=3.6e-11 Score=127.83 Aligned_cols=179 Identities=12% Similarity=0.001 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHH-HHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWT-IAIFTTIYLA 148 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~-i~~~~~~~~~ 148 (634)
.++......++.....+.+..+++.|+.+.+|.+..+.++......++..++.+++|+++||+ |||+. +........+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~ 294 (399)
T TIGR00893 216 RVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAII 294 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHHH
Confidence 466677777888888888888999999999999999999999999999999999999999998 98861 1111111111
Q ss_pred HHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhh
Q 006710 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (634)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~ 228 (634)
+.+...+....... . .+....+. ..+.+.+..+..+...++.+|.+|+++ |+
T Consensus 295 ~~~~~~~~~~~~~~--~-------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g 346 (399)
T TIGR00893 295 AGLVLSLLMFATNY--V-------------------NIPYAALA-LVALGFFGLGAGAIGWALISDNAPGNI------AG 346 (399)
T ss_pred HHHHHHHHHHHhcc--c-------------------hhHHHHHH-HHHHHHhchhhhhHHHHHHHhhcChhH------HH
Confidence 11111111000000 0 12233333 333333333478999999999999998 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHHHH
Q 006710 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 229 ~~~~~~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~ 277 (634)
+.+++++...++|..++|.+.+++.+..| |...|++.++..+++.+..+
T Consensus 347 ~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 347 LTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888 99998887776666555443
No 132
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.37 E-value=2.6e-11 Score=132.04 Aligned_cols=177 Identities=16% Similarity=0.120 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc--hhHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG--RYWTIAIFTTIYL 147 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~G--Rr~~i~~~~~~~~ 147 (634)
.++.+.+..++..+.++++..++|.|+.+++|++..+++...+.+.++..++.+++|+++||+.+ |++......+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 35666666666677777888899999998999999999999999999999999999999999732 2332222221111
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
+....+... +. .+.....+..++.|++............+|.+|++. |
T Consensus 324 ~~~~~~~~~-------~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 371 (434)
T PRK11663 324 LSVGSLWLM-------PF-------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------A 371 (434)
T ss_pred HHHHHHHHc-------cc-------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------H
Confidence 121111111 00 122333333444555444334444567789999888 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
++..++.+...++|..++|.+.+++.+..||+..|++.+++.+++.+....
T Consensus 372 g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 372 GAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998887776665554443
No 133
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.36 E-value=7.5e-12 Score=112.42 Aligned_cols=132 Identities=20% Similarity=0.230 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHH
Q 006710 112 NNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLY 191 (634)
Q Consensus 112 ~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (634)
+.+.++..++.++.|+++||+ |||+.+..+..+..++.+.+... .+.+.+.
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~ 55 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALS----------------------------SNITVLI 55 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHh----------------------------ccHHHHH
Confidence 445677888999999999998 99999999988888887776664 4567788
Q ss_pred HHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHH
Q 006710 192 TVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGI 271 (634)
Q Consensus 192 ~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i 271 (634)
+.+++.|++.+...+...++..|.+|+++ |++..++++....+|..++|.+.+++.+..+|++.|++.....++
T Consensus 56 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (141)
T TIGR00880 56 IARFLQGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALA 129 (141)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHH
Confidence 88999999999999999999999999998 999999999999999999999999999888999999887766655
Q ss_pred HHHHHHH
Q 006710 272 SNMLFFI 278 (634)
Q Consensus 272 ~~~~~~~ 278 (634)
..+....
T Consensus 130 ~~~~~~~ 136 (141)
T TIGR00880 130 AFILLAF 136 (141)
T ss_pred HHHHHhh
Confidence 5554443
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.35 E-value=5.5e-11 Score=128.01 Aligned_cols=165 Identities=12% Similarity=0.042 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChh---HHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 006710 79 MAERMAYFGLSVNMVTFMFYVMHKSFA---DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (634)
Q Consensus 79 ~~~~~~~~~~~~~l~~yl~~~~~~s~~---~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~ 155 (634)
+........+..+++.|+.+..+.... ..+.+...+.++..++.++.|+++||+ |||+++.++.++..++.+.+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~ 307 (408)
T PRK09874 229 LIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSF 307 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHH
Confidence 333444445566778888765443222 245555666777888899999999998 9999999988877766665554
Q ss_pred hhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHH
Q 006710 156 CATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY 235 (634)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 235 (634)
. .+.+.+++.+++.|++.+...+...+++.+..|++. |++.+++++
T Consensus 308 ~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~ 353 (408)
T PRK09874 308 V----------------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQ 353 (408)
T ss_pred h----------------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHH
Confidence 3 345667788889999999999999999999999888 999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 236 LSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 236 ~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
...++|..+||.++|++.+..||++.|++.+++.+++.+..+.
T Consensus 354 ~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 354 SFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988877766665544
No 135
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.35 E-value=8.1e-11 Score=126.75 Aligned_cols=166 Identities=10% Similarity=-0.018 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 006710 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (634)
Q Consensus 76 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~ 155 (634)
...++....++.+..++|.|+.+ .|++..+.+.....+.++..++.++.|+++||+ |||+.+..+.+...++...+..
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~ 304 (406)
T PRK11551 227 ISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAA 304 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHh
Confidence 33444455666777788888865 799999999999999999999999999999998 9999988876665555444443
Q ss_pred hhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHH
Q 006710 156 CATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY 235 (634)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 235 (634)
. .+...+++..++.|++.++..+...++..|.+|+++ |++.+++++
T Consensus 305 ~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~ 350 (406)
T PRK11551 305 A----------------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAV 350 (406)
T ss_pred c----------------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHH
Confidence 2 234455566677888888888889999999999999 999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHHHH
Q 006710 236 LSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 236 ~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~ 277 (634)
....+|..++|.+.|++.+..+ |...+++...+.+++.+..+
T Consensus 351 ~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 351 AVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987654 55566655555555444433
No 136
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.35 E-value=1.9e-10 Score=119.26 Aligned_cols=410 Identities=11% Similarity=-0.010 Sum_probs=222.4
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH
Q 006710 62 LSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAI 141 (634)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~ 141 (634)
+.-+++|.-++...+..+.+.+-. .-......|..+.++ +...+-|...+|++.+......+-|+.|++ |-|.+.++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qW-I~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~ll 114 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQW-IQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLL 114 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchh-eeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHH
Confidence 344566765555555555543322 111233456677777 777888999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhH--HHHHHHHHHHHHhhhchhhhHHHHhhccCCCC
Q 006710 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM--LYLYTVLYITGFGAAGIRPCVSSFGADQFDER 219 (634)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~ 219 (634)
+.++..+|..+=..+.. +... +.. ...+.+..+.+...-.+...-+-+-+-+|+++
T Consensus 115 gt~ln~iGa~Ir~iss~-p~v~---------------------~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~ 172 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSL-PFVP---------------------PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPD 172 (480)
T ss_pred HHHHHHHHHHHhhhccC-cccc---------------------ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcc
Confidence 99999999888776632 1111 122 25566666766666655555555667789999
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh------ccchHHH--HHHHHHHHHHHHHHHHHhccccccCCCCCC
Q 006710 220 SKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM------EHGWGSA--FGALAIAMGISNMLFFIGTPLYRHRLPGGS 291 (634)
Q Consensus 220 ~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~------~~gw~~~--f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 291 (634)
+ |.++..+-.++..+|.+++.++...+.. ...|... |+....+.++.+++..+.+++.+..||.
T Consensus 173 q------ra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps-- 244 (480)
T KOG2563|consen 173 Q------RAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPS-- 244 (480)
T ss_pred h------hhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc--
Confidence 8 9999888777766776666655544433 2345542 3323333333333333332222211211
Q ss_pred cHHHHHHHHHHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhH
Q 006710 292 PLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEE 371 (634)
Q Consensus 292 ~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 371 (634)
... . .+. +.++. +.
T Consensus 245 -----------------------~s~------------~-----~~~-~~~f~-------------------------~s 258 (480)
T KOG2563|consen 245 -----------------------ASQ------------A-----ALQ-DASFP-------------------------KS 258 (480)
T ss_pred -----------------------hhH------------h-----hhh-cCcHH-------------------------HH
Confidence 100 0 000 00000 11
Q ss_pred HHHHHhHhhHHHHHHHHHHHHHhhhhH--HHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCC
Q 006710 372 VKTLVRLVPIPACTIMLNVILTEFLTL--SVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGH 449 (634)
Q Consensus 372 ~k~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~ 449 (634)
.++.+.-..+.+..+.+.......+.. ...+... ..+.. +...+.......+..++...+.+.+.||..+-+
T Consensus 259 i~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~-~sgY~--~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk--- 332 (480)
T KOG2563|consen 259 IKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALC-PSGYE--GVFAGYIGALMIVAGMLGALASGIIADKTKKFK--- 332 (480)
T ss_pred HHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccc-cccCC--ccccchhHHHHHHHHHHHHHHHHhhhhhhhhHH---
Confidence 111111111111112222211111111 1111111 11111 123455555666667777777888887643221
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006710 450 PRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYE 529 (634)
Q Consensus 450 ~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~ 529 (634)
..+.+-.....++.+++...... +..+ +++.....++|..+....|...|+..|
T Consensus 333 -------~~~~v~~~~~~v~~~~l~~~t~~------------------~~~~-viv~~t~~~~g~~~~~~~Pig~ElgvE 386 (480)
T KOG2563|consen 333 -------LTTLVLYLFALVGTLMLLTCTLF------------------LGDS-VIVFTTCGLLGFFGTGYLPIGFELGVE 386 (480)
T ss_pred -------HHHHHHHHHHHHHHHHHHHhhcc------------------CCce-EehhhhHHHHHHhhcCCCCcceeeeee
Confidence 11222222222221111111110 1022 333444456788888889999999999
Q ss_pred hcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 006710 530 EAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYR 609 (634)
Q Consensus 530 ~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~ 609 (634)
..=+..-+...|+.++..++.+.+-..+.+...+.. +..+| ....-+.++..+++.+.+..++..+
T Consensus 387 ~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~-----~~~~~---------~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 387 TTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDL-----GPPGN---------TFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred eccccCCcccceeEEeehhHHHHHHHHHHHHHhhcc-----CCCCC---------CccchhHhHHHHHHHHHHHhhhhhh
Confidence 877788899999999998888888887777665421 11222 0111244555666666666777666
Q ss_pred ceecccc
Q 006710 610 YKYRSEQ 616 (634)
Q Consensus 610 ~~~~~~~ 616 (634)
++++..|
T Consensus 453 y~R~~~e 459 (480)
T KOG2563|consen 453 YRRLRAE 459 (480)
T ss_pred HHhHhhh
Confidence 6665444
No 137
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.35 E-value=5.1e-11 Score=128.96 Aligned_cols=177 Identities=11% Similarity=0.045 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------hhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKS--------FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s--------~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
...+..++..........+.+.|+.+ .|.+ ....+...+...+...++.++.|+++||+ |||+++.++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~ 289 (418)
T TIGR00889 212 IFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLV 289 (418)
T ss_pred eHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 34444444444444455666778754 4544 35668889999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
+..++..++..... +..+...+++.+++.|++.+...+....+++|.+|++.
T Consensus 290 ~~~v~~~l~~~~~~------------------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~---- 341 (418)
T TIGR00889 290 AWALRFGFFAYGDP------------------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI---- 341 (418)
T ss_pred HHHHHHHHHHHcCc------------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH----
Confidence 88877666655310 00234566778899999999988999999999999998
Q ss_pred hhhhhHHHHHH-HHHHHHHHHHHHHHHHHhhc------cchHHHHHHHHHHHHHHHHHHHHhcc
Q 006710 225 THLDRFFNFFY-LSVTVGAIVAFTLVVYIQME------HGWGSAFGALAIAMGISNMLFFIGTP 281 (634)
Q Consensus 225 ~~r~~~~~~~~-~~~~lg~~~~p~i~~~l~~~------~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (634)
|++.+++++ ....+|..+||.++|++.+. +||++.|.+.+++.++..+++....+
T Consensus 342 --~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 342 --RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred --HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999987 56789999999999999886 46999998887776666555544443
No 138
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.34 E-value=9.5e-10 Score=113.68 Aligned_cols=107 Identities=15% Similarity=-0.005 Sum_probs=77.1
Q ss_pred HHHHHHHHHHhCC---Ch----hHHHHHHHHHHHHHHHHHHHHHHHhhhccc-hhHHHHHHHHHHHHHHHHHHHhhhhcc
Q 006710 90 VNMVTFMFYVMHK---SF----ADSSNAVNNFLGISQASSVLGGFLADAYLG-RYWTIAIFTTIYLAGLTGITLCATMKV 161 (634)
Q Consensus 90 ~~l~~yl~~~~~~---s~----~~~~~~~~~~~~~~~~~~l~~G~lsDr~~G-Rr~~i~~~~~~~~~~~~~~~~~~~~~~ 161 (634)
..+|.|+++..+. ++ +..+...++..+..++..|+-|-++|+. | ||+.+.+..++-++.+..+++...
T Consensus 36 ~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~~--- 111 (438)
T COG2270 36 FIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIPP--- 111 (438)
T ss_pred ehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhCC---
Confidence 3467888877654 33 3456677777888888999999999987 8 555666666666666666666510
Q ss_pred cCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcc
Q 006710 162 FMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (634)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~ 222 (634)
+..++..++...+..++..+......+++.|..++++.+
T Consensus 112 ----------------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~ 150 (438)
T COG2270 112 ----------------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMG 150 (438)
T ss_pred ----------------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccC
Confidence 024455555667788888888899999999999998855
No 139
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.34 E-value=1.5e-10 Score=124.22 Aligned_cols=175 Identities=15% Similarity=0.051 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
.+.+.+..++..++++++..+++.|+.+ +|.+..+++...+.+.++..++.++.|+++||+ |||+.+.++..+..++.
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~~ 284 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVGF 284 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHH
Confidence 4555555566677888898999999976 899999999999999999999999999999998 99999988877776665
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCC-CCcchhhhhhh
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE-RSKDYKTHLDR 229 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~-~~~~~~~~r~~ 229 (634)
..+.... .+...+. .++.|++.+...+.......|.+++ ++ |++
T Consensus 285 ~~~~~~~---------------------------~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~------~g~ 329 (393)
T PRK09705 285 CGFIWLP---------------------------LQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAI------AGK 329 (393)
T ss_pred HHHHHcc---------------------------chHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHH------HHH
Confidence 5443320 1112222 2456888888888877777888864 45 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHHHHHhccc
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGTPL 282 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~~~~ 282 (634)
.+++.+...+++..++|.+.|++.+..| |...|++.....++.++......++
T Consensus 330 ~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK09705 330 LVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPA 383 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999876 7888888777666666555554443
No 140
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.34 E-value=1.1e-09 Score=113.43 Aligned_cols=84 Identities=10% Similarity=0.027 Sum_probs=71.1
Q ss_pred hhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc---------
Q 006710 185 WQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME--------- 255 (634)
Q Consensus 185 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~--------- 255 (634)
.++..++++.+++|.|.+..++...++++++.++++ +.+.+++......+|..++|++++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 578899999999999999999999999999999988 99999999999999999999999987632
Q ss_pred -------cchHHHHHHHHHHHHHHHH
Q 006710 256 -------HGWGSAFGALAIAMGISNM 274 (634)
Q Consensus 256 -------~gw~~~f~~~~~~~~i~~~ 274 (634)
..|+++|++.+....+..+
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~i 107 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLAI 107 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3688888865554433333
No 141
>PRK03545 putative arabinose transporter; Provisional
Probab=99.33 E-value=1.7e-10 Score=123.71 Aligned_cols=173 Identities=14% Similarity=-0.036 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 006710 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (634)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~ 151 (634)
+...+..++.....++...+++.|+.+.+|.+..++++..+.+.++..++.++.|+++||+ |||+.+ .+..+..++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~~ 285 (390)
T PRK03545 208 VSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCLL 285 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHHH
Confidence 3334444555556666667788899888999999999999999999999999999999998 987654 44444333333
Q ss_pred HHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHH
Q 006710 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (634)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 231 (634)
...... .+...+++..++.|++.+...+...+.+.+..| +. |++++
T Consensus 286 ~l~~~~---------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~ 331 (390)
T PRK03545 286 LLLPAA---------------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAM 331 (390)
T ss_pred HHHHHh---------------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHH
Confidence 222210 345666777788888888777777788888766 45 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhc
Q 006710 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (634)
Q Consensus 232 ~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 280 (634)
++++....+|..+||.++|++.++.|++..|++.+.+.+++++......
T Consensus 332 g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 332 ALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 9998889999999999999999999999999988887777666655443
No 142
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.32 E-value=3.7e-11 Score=130.16 Aligned_cols=161 Identities=12% Similarity=0.089 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHHHHh---CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhh
Q 006710 83 MAYFGLSVNMVTFMFYVM---HKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATM 159 (634)
Q Consensus 83 ~~~~~~~~~l~~yl~~~~---~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~ 159 (634)
..+......++.|+.+.+ +.+..+.+.+.++..++..++.+++|+++||+ |||+.+.++.++..++..++.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~--- 312 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFA--- 312 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhc---
Confidence 333344445677776543 56667889999999999999999999999998 99999999888888877777664
Q ss_pred cccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHH-HHHHH
Q 006710 160 KVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF-FYLSV 238 (634)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~-~~~~~ 238 (634)
.+.+.+++.+++.|++.+...+....++.|.+|++. |++..+. ++...
T Consensus 313 -------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~ 361 (420)
T PRK09528 313 -------------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAK 361 (420)
T ss_pred -------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHH
Confidence 456777888889999988888888899999999888 7777665 67778
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 239 TVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 239 ~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
.+|..++|.+.|++.+..||+..|.+.+++.++..++.+.
T Consensus 362 ~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 362 QLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999877766555544433
No 143
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.32 E-value=2.2e-10 Score=122.47 Aligned_cols=168 Identities=9% Similarity=-0.082 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.++...+..++...+.+...++.+.|+++ +|.+..+.+.+.+...++..+..++.|++.||+ |+|+.+.++.++..+.
T Consensus 206 ~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~~ 283 (382)
T TIGR00902 206 MNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVGR 283 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHHH
Confidence 35666666777777888888899999965 899999999999999999999999999999998 9999999999999988
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
...++.+ .+.+.+++..+++|+..+...+....++.+. |+++ |++
T Consensus 284 ~~~~~~~----------------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~ 328 (382)
T TIGR00902 284 WAIIGAI----------------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAK 328 (382)
T ss_pred HHHHHhH----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHH
Confidence 8877765 6778888899999999999999999999988 8877 899
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q 006710 230 FFNFFYL-SVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (634)
Q Consensus 230 ~~~~~~~-~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 275 (634)
+.++++. +..+|..++|.++|++.+..|+ ..|++.+...++++++
T Consensus 329 ~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 329 LQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999864 6789999999999999999886 5666666655555443
No 144
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.31 E-value=7e-11 Score=130.84 Aligned_cols=149 Identities=16% Similarity=0.117 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCC
Q 006710 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (634)
Q Consensus 87 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (634)
.+..++|.|+++++|++..+++++.+.+.++..++.+++|+++||+ |||+++.++.++..++.++..... .
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~-------~- 363 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG-------G- 363 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc-------c-
Confidence 4567889999989999999999999999999999999999999998 999998887766555443333220 0
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 006710 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (634)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p 246 (634)
.+.+.+.+..++.++...+..+..++++.|.+|++. |++.+++++...++|..+||
T Consensus 364 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp 419 (496)
T PRK03893 364 ------------------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAP 419 (496)
T ss_pred ------------------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHH
Confidence 233334444444444444455677888999999988 99999999999999999999
Q ss_pred HHHHHHhhccchHHHHHHHHHH
Q 006710 247 TLVVYIQMEHGWGSAFGALAIA 268 (634)
Q Consensus 247 ~i~~~l~~~~gw~~~f~~~~~~ 268 (634)
.++|++.+..||+..+.+.+..
T Consensus 420 ~l~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 420 ILGALIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHHHHHhccCChHHHHHHHHHH
Confidence 9999999999998877655443
No 145
>PRK12382 putative transporter; Provisional
Probab=99.31 E-value=1.1e-10 Score=125.29 Aligned_cols=161 Identities=14% Similarity=0.097 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhh
Q 006710 80 AERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATM 159 (634)
Q Consensus 80 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~ 159 (634)
+..+.+..+..+.+.|+.+ .|++. .+.....+.++..++.++.|++.||+ |||+.+.++..+..++.++..+.
T Consensus 227 l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~--- 299 (392)
T PRK12382 227 LQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLA--- 299 (392)
T ss_pred HHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHc---
Confidence 3345555666777788764 46553 45666777888889999999999998 99999999888888777666553
Q ss_pred cccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHH
Q 006710 160 KVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVT 239 (634)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~ 239 (634)
.+...+++..++.|++.+...+...+...|.+|+++ |++.+++++...+
T Consensus 300 -------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~ 348 (392)
T PRK12382 300 -------------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQD 348 (392)
T ss_pred -------------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHH
Confidence 345666777888999999888888889999999988 9999999999999
Q ss_pred HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 240 VGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 240 lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
+|..++|.+.+++.+..||++.|.+.+++.+++.++.+.
T Consensus 349 ~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 349 IAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999888777666665543
No 146
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.31 E-value=6.9e-11 Score=126.75 Aligned_cols=165 Identities=13% Similarity=0.058 Sum_probs=128.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~ 145 (634)
++|..+.......++..........+++.|+.+++|++..+++++.+.+.++..++.++.|+++||+ |||+.+.++.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~ 313 (405)
T TIGR00891 235 KRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLA 313 (405)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHH
Confidence 4444444444444455555566777889999999999999999999999999999999999999998 999998888765
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
..+........ . .+.+.+.++.++.+++.++..+...+++.|.+|++.
T Consensus 314 ~~~~~~~~~~~-------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 361 (405)
T TIGR00891 314 GQLLIIPVFAI-------G--------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ----- 361 (405)
T ss_pred HHHHHHHHHHh-------C--------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch-----
Confidence 43322222111 0 244555566667777777778888899999999998
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHH
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGA 264 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~ 264 (634)
|++.+++.+...++|..++|.+.|++.+..| |...+..
T Consensus 362 -~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 362 -RAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred -hHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999999999999999999999888 7766554
No 147
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.30 E-value=1.3e-10 Score=125.72 Aligned_cols=162 Identities=12% Similarity=-0.026 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCC
Q 006710 85 YFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMP 164 (634)
Q Consensus 85 ~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (634)
.+++..++|.|+.+.+|.+..+.+++.+.+.++..++.++.|+++||. ++++.+..+.++..++.+++.+.
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~-------- 309 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLM-------- 309 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHcc--------
Confidence 345667889999888999999999999999999999999999999986 88888888877777776665543
Q ss_pred CCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHH
Q 006710 165 NQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIV 244 (634)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~ 244 (634)
.+.....++.++.|++.+...+...+++.|.+|++. |++.+++++...++|..+
T Consensus 310 --------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~ 363 (417)
T PRK10489 310 --------------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAI 363 (417)
T ss_pred --------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhH
Confidence 445566677788888888877888899999999988 999999999999999999
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 006710 245 AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (634)
Q Consensus 245 ~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (634)
||.+.|++.+..|++..+++.+.+..+..++.....+
T Consensus 364 g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 364 GAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999989888887666554444444433333
No 148
>PRK15075 citrate-proton symporter; Provisional
Probab=99.30 E-value=1.7e-10 Score=125.57 Aligned_cols=161 Identities=15% Similarity=0.068 Sum_probs=115.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 006710 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (634)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~ 146 (634)
+|+.........++....++.+..++|.|+++.+|++..++++....+.++..++.+++|+++||+ |||++++.+.++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~ 314 (434)
T PRK15075 236 NWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLA 314 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHH
Confidence 444343444445556677888889999999998999999999888888899999999999999998 9999888765443
Q ss_pred HHHHHH-HHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 147 LAGLTG-ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 147 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
.+...+ ..... .. .+.....+..++.+++.+...+....+..|.+|++.
T Consensus 315 ~~~~~~~~~~~~------~~-------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~----- 364 (434)
T PRK15075 315 ILTAYPALSWLV------AA-------------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV----- 364 (434)
T ss_pred HHHHHHHHHHHH------cC-------------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc-----
Confidence 322111 11110 00 222333444455667777767777788999999999
Q ss_pred hhhhHHHHHHH-HHHHHHHHHHHHHHHHhhccchH
Q 006710 226 HLDRFFNFFYL-SVTVGAIVAFTLVVYIQMEHGWG 259 (634)
Q Consensus 226 ~r~~~~~~~~~-~~~lg~~~~p~i~~~l~~~~gw~ 259 (634)
|++++++.+. +..+++.++|.+.+++.+..|+.
T Consensus 365 -rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 365 -RTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred -cchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 9999998544 44556888999999999988853
No 149
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.29 E-value=7.1e-11 Score=128.72 Aligned_cols=182 Identities=15% Similarity=0.076 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.++...+..++.....+++..++|.|+++..|++..++++....+.++..++.+++|+++||+ |+++....+..+..+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHH
Confidence 356666666666777788889999999998999999999999999999999999999999998 7544323333222221
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
.+...... ..+. .+.....+..++.|++..+..........|.+|++. |++
T Consensus 331 ~~~~~~~~----~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~ 381 (438)
T TIGR00712 331 TIAVIVYW----MNPA-------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGT 381 (438)
T ss_pred HHHHHHHH----hcCC-------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eee
Confidence 11111100 0000 122333344455555544433343456789999988 999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 006710 230 FFNFFYLSVTVGA-IVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (634)
Q Consensus 230 ~~~~~~~~~~lg~-~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (634)
+.++++...++|+ .++|.+.|++.+..||.+.|++..+..+++++..+...+
T Consensus 382 ~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
T TIGR00712 382 AAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 434 (438)
T ss_pred ehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999988877764 689999999999899999998877766666655554433
No 150
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.28 E-value=3.7e-10 Score=122.90 Aligned_cols=180 Identities=11% Similarity=0.046 Sum_probs=116.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 006710 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (634)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~ 146 (634)
+++..+......+.....+|++..++|.|+.+.+|++..+++...+...++..++.++.|+++||+ |||+++.++.++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~ 319 (432)
T PRK10406 241 NRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLA 319 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHH
Confidence 344333333334445678889999999999999999999999888888888888899999999998 9999887766544
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
.+.......... .. .+....+....+.+++.+...+....+.+|.+|++.
T Consensus 320 ~~~~~~~~~~~~-----~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------ 369 (432)
T PRK10406 320 ALFTVPILSALQ-----NV-------------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------ 369 (432)
T ss_pred HHHHHHHHHHHH-----cC-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------
Confidence 333322211100 00 122222222222223334444567788999999999
Q ss_pred hhhHHHHHHHH-HHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHHHHH
Q 006710 227 LDRFFNFFYLS-VTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 227 r~~~~~~~~~~-~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~ 278 (634)
|++++++.+.. ..+++...|.+.+++.. .| |...+++.++..+++++..++
T Consensus 370 r~t~~g~~~~~g~~~~g~~~p~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 370 RALGVGLSYAVANALFGGSAEYVALSLKS-IGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred cchhhhHHHHHHHHHHHhHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999996654 44445568888886644 45 555666555555555444433
No 151
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.28 E-value=1.1e-09 Score=121.55 Aligned_cols=202 Identities=14% Similarity=0.115 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 006710 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (634)
Q Consensus 76 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~ 155 (634)
+..+...+.. +......+-+.+.++++.++.|++.+.|-++..+...+..+.+-|. =|-|.+-++++++.+|.+++++
T Consensus 104 ~~~~~q~l~~-~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~lgsll~al 181 (735)
T KOG3626|consen 104 LAAFAQGLYV-GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGLGSLLFAL 181 (735)
T ss_pred HHHHHHHhhh-hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHHHHHHHhC
Confidence 3334444444 6667778889999999999999999999999999999999999986 6778888999999999999887
Q ss_pred hhhhc-ccCCCC----------------Cccccc----ccccCCCC---CccchhHHHHHHHHHHHHHhhhchhhhHHHH
Q 006710 156 CATMK-VFMPNQ----------------DNCDRI----SQLLGSCE---PAKSWQMLYLYTVLYITGFGAAGIRPCVSSF 211 (634)
Q Consensus 156 ~~~~~-~~~~~~----------------~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~ 211 (634)
..++. .....+ +.|++. ++.+++|+ ..+..-+.+++++.++.|+|...+++...+|
T Consensus 182 PHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisY 261 (735)
T KOG3626|consen 182 PHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISY 261 (735)
T ss_pred hHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcc
Confidence 53221 000000 001110 11222332 2222233467788999999999999999999
Q ss_pred hhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh------------------ccc-hHHHHHHHHHHHHHH
Q 006710 212 GADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM------------------EHG-WGSAFGALAIAMGIS 272 (634)
Q Consensus 212 ~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~------------------~~g-w~~~f~~~~~~~~i~ 272 (634)
+=|-..+++ -...+++.+....+|+++|.++++++.. +.| ||..|++.+.+.++.
T Consensus 262 iDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 262 IDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFS 335 (735)
T ss_pred ccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 988888777 7889999999999999999999987642 133 899999999888888
Q ss_pred HHHHHHhcccccc
Q 006710 273 NMLFFIGTPLYRH 285 (634)
Q Consensus 273 ~~~~~~~~~~~~~ 285 (634)
.+.+++..+..++
T Consensus 336 a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 336 AVPLFFFPKELPK 348 (735)
T ss_pred HHHHHhCcccCcc
Confidence 7777776665443
No 152
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.27 E-value=4.7e-10 Score=122.29 Aligned_cols=186 Identities=13% Similarity=0.049 Sum_probs=150.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchh--HHHHHHHHH
Q 006710 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY--WTIAIFTTI 145 (634)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr--~~i~~~~~~ 145 (634)
-|.+..-++..++.+-+...+......|.++++|++..+...+.....+...++.+++|++.||+ |-| ++++++.++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLIL 358 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHH
Confidence 35667777777888888888999999999999999999999999999999999999999999998 988 888888777
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
+.+..+.-.+. ..+..... .+.+.+++.-++.|+..|..++..-++.+|+.|+++
T Consensus 359 ~~~i~~~g~~G-~~~~~~g~-------------------~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~----- 413 (477)
T PF11700_consen 359 WIIIPLYGLFG-FWPSFFGL-------------------KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR----- 413 (477)
T ss_pred HHHHHHHHHHH-hhhcccCc-------------------ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch-----
Confidence 64322222220 00000000 355667777789999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHHHHHhc
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGT 280 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~~ 280 (634)
.+.+|++|.+..-..+.+||++.+.+.+.+| -|+++....++.+++++++....
T Consensus 414 -e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 414 -EAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999998876 88888888877777777765543
No 153
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.27 E-value=4.2e-10 Score=120.24 Aligned_cols=154 Identities=16% Similarity=0.139 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhccc
Q 006710 83 MAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVF 162 (634)
Q Consensus 83 ~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~ 162 (634)
+.+.....++|.|+++ .|.+.++.+...+.+.++..++.++.|+++||+ |||+++..+.++..++..... .
T Consensus 214 ~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~------ 284 (381)
T PRK03633 214 IVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S------ 284 (381)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h------
Confidence 3444455677888865 699999999999999999999999999999998 999999888777766554332 1
Q ss_pred CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHH
Q 006710 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (634)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 242 (634)
. ...+..+++.|++.+...|...+...|..|+++ ++...+.++...++|.
T Consensus 285 ----------------------~--~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~ 334 (381)
T PRK03633 285 ----------------------Q--AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGS 334 (381)
T ss_pred ----------------------h--HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHH
Confidence 1 123345667777777778999999999998877 7777888888899999
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q 006710 243 IVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (634)
Q Consensus 243 ~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 275 (634)
.+||.++|++.++++|++.|.+.+.+.++..+.
T Consensus 335 ~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 335 LLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 999999999999999999998877666554433
No 154
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.27 E-value=5.6e-10 Score=120.25 Aligned_cols=175 Identities=14% Similarity=0.050 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHH-HHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA-IFTTIYLAG 149 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~-~~~~~~~~~ 149 (634)
++...+..++...++++...++|.|++ ++|++..+.+.+...+.++..++.++.|+++||+ |||+.+. .+.+...++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~~ 301 (402)
T TIGR00897 224 VLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGIF 301 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHH
Confidence 555556667777888888999998885 5899999999999999999999999999999998 9888764 233333333
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
.+.+..... ... .+.+..++..++.|++.+...+. .+...|..| ++ |++
T Consensus 302 ~~~l~~~~~---~~~--------------------~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~------~g~ 350 (402)
T TIGR00897 302 TLALYYIPQ---HFG--------------------HSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KH------KGA 350 (402)
T ss_pred HHHHHHHHH---ccC--------------------CcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-ch------hHH
Confidence 222222100 000 23455566677888887776554 456667654 46 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
.+++++...++|..++|.+++++.+..||...|++.+++.+++.++..+
T Consensus 351 ~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 351 AMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888776665554433
No 155
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.25 E-value=8.2e-10 Score=122.01 Aligned_cols=172 Identities=10% Similarity=0.070 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHH-HHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 006710 78 EMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVN-NFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (634)
Q Consensus 78 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~-~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~ 156 (634)
.++..++.+....+.+.|+.+++|++.++.++... ...++..++.+++|+++||+ |||+.+.++.++..++...+...
T Consensus 231 ~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~l~~~~l 309 (491)
T PRK11010 231 IVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSNAGYWLL 309 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555566677888988889999999999875 55678999999999999998 99998877666555544333221
Q ss_pred hhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHH
Q 006710 157 ATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL 236 (634)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 236 (634)
.. .. .+...+.+..++..++.|...+...++..++.+++. +++.+++.+.
T Consensus 310 ~~----~~--------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s 359 (491)
T PRK11010 310 SI----TD--------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSA 359 (491)
T ss_pred Hh----cc--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHH
Confidence 10 00 233344445556555556556677888889999888 8888999999
Q ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhc
Q 006710 237 SVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (634)
Q Consensus 237 ~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 280 (634)
..++|..+++.+.|++.+..||+..|.+..++.+++++.....+
T Consensus 360 ~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 360 LSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999998888999999999999999888888777766665543
No 156
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.23 E-value=2e-10 Score=121.66 Aligned_cols=161 Identities=16% Similarity=0.122 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH--HHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT--IYL 147 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~--~~~ 147 (634)
.++.+.+..++.....+++..+++.|+.+.+|++..+++...+.+.++..++.++.|+++||..+||+..+.... +..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 296 (379)
T TIGR00881 217 VLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALII 296 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 356666667777777778888999999999999999999999999999999999999999986344443322211 111
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
++....... +. .+.....+..++.|+...+..+....+..|.+|++. |
T Consensus 297 ~~~~~~~~~-------~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 344 (379)
T TIGR00881 297 VSLLVYWLN-------PA-------------------ANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------A 344 (379)
T ss_pred HHHHHHhcC-------cc-------------------hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------h
Confidence 111111110 00 234445555667777666666777788999999998 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHH
Q 006710 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAF 262 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f 262 (634)
+++.++++...++|..++|.+.|++.+..||++.|
T Consensus 345 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 345 GTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 99999999999999999999999999999998654
No 157
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.22 E-value=1.2e-09 Score=113.97 Aligned_cols=177 Identities=15% Similarity=0.086 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.++.....+++...+.|...+|+-.|+++..|+|.+..+++...|.++..++.+++|+++|| +.|+++.....+..+.
T Consensus 212 ~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~~ 289 (394)
T COG2814 212 GVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLALA 289 (394)
T ss_pred hHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHHH
Confidence 37888888999999999999999999999999999999999999999999999999999998 7888888887777777
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
...+.+.. .+.+...+..++.|+..+........-.++ .-++. ++.
T Consensus 290 ~l~l~~~~---------------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~------~~~ 335 (394)
T COG2814 290 LLALTFTG---------------------------ASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDA------ADL 335 (394)
T ss_pred HHHHHHhc---------------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCc------hHH
Confidence 66666542 344555555566777766665666666666 33455 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccc
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPL 282 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 282 (634)
+.+++..+.|+|..+|..++|.+.+++|+....++.++..++++++.+...+.
T Consensus 336 a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 336 AGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999998888888776665443
No 158
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.22 E-value=3.1e-10 Score=124.32 Aligned_cols=170 Identities=7% Similarity=-0.023 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHHH--
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY-LGRYWTIAIFTTIY-- 146 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~-~GRr~~i~~~~~~~-- 146 (634)
.++......++..++++....+++.|+.+ +|++..++++..+.+.++..++.+++|+++||. +++|+...++....
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 320 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFN 320 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 35666666677777888888889999864 799999999999999999999999999999984 24454444433222
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
.++.+++... .+.+.+++.+++.|++.+...++..+++.|.+|+++
T Consensus 321 ~l~~ll~~~~----------------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------ 366 (455)
T TIGR00892 321 GLTHLLCALA----------------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------ 366 (455)
T ss_pred HHHHHHHHHh----------------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------
Confidence 2333333332 456777888899999999999999999999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcc-chHHHHHHHHHHHHHHHH
Q 006710 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEH-GWGSAFGALAIAMGISNM 274 (634)
Q Consensus 227 r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~-gw~~~f~~~~~~~~i~~~ 274 (634)
+++.+++++...++|..+||.++|++.+.. +|++.|++.++..+++.+
T Consensus 367 ~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 367 FSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999999999999999999999998877 599999888776555544
No 159
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.21 E-value=3.5e-10 Score=123.70 Aligned_cols=186 Identities=13% Similarity=0.007 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
++...+..+........+..+ ..++.+++|++..++++....+.++..++.+++|+++||+ |||+.+.++.++..++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 286 FLGVVLQWFQQFTGINAIMYY-SPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHhCCeehHHH-HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHH
Confidence 333333333333333333334 4445567899998889999999999999999999999998 99999999988777776
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
+++.+..... .+. .....+...+....++.+....+..+....+..|.+|++. |+++
T Consensus 364 ~~~~~~~~~~--~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~ 420 (481)
T TIGR00879 364 FVLGILGASF--VTG---------------SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKG 420 (481)
T ss_pred HHHHHHhhcc--cCC---------------cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHH
Confidence 6665321100 000 0000122222222223333333344667778899999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (634)
.++.+...++|..++|.+.+++.++.+|++.|++.+++.+++.++.+...+
T Consensus 421 ~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 421 ISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecc
Confidence 999999999999999999999998889999998877776666655544333
No 160
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.18 E-value=1.9e-09 Score=111.75 Aligned_cols=161 Identities=11% Similarity=-0.003 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYV--MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~ 147 (634)
..++..+..++...+-.++..|++.|+.+. +|++.++++...+.+..+..++.+++++++||+ |+||++.++..+.+
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHH
Confidence 455555555554445567788999999854 799999999999999999999999999999998 99999988887777
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
++.++.... .+.. ...+.++.|++.+...|...+...+.+|++.. +
T Consensus 220 ~~~~l~~~~----------------------------~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~-----~ 265 (310)
T TIGR01272 220 LLSIGAALT----------------------------HGYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHTS-----Q 265 (310)
T ss_pred HHHHHHHHc----------------------------CCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----h
Confidence 666444432 1111 22355588999999999999999998886541 4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Q 006710 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~ 268 (634)
+++ +. ....+|+.+.|.+.|++.+..|.+.+|++..++
T Consensus 266 asa--i~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 266 GSG--IL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred hHH--HH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 443 43 456689999999999999988988888765544
No 161
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.16 E-value=9.4e-09 Score=111.42 Aligned_cols=161 Identities=14% Similarity=0.041 Sum_probs=117.2
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc--cc--hhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCC
Q 006710 92 MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY--LG--RYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (634)
Q Consensus 92 l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~--~G--Rr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (634)
...|+++++|+++++.....+...+... .-++.|.++|.+ +| ||+-++++.++..++...+++... .
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~---~----- 82 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA---S----- 82 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc---c-----
Confidence 4567899999999998887776666555 457789999986 35 555666677666555555544311 0
Q ss_pred cccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHH
Q 006710 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (634)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~ 247 (634)
..+.....+..++..+|....-.+.-++..|....+... |+...++.+....+|..++..
T Consensus 83 ----------------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~ 142 (433)
T PF03092_consen 83 ----------------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSL 142 (433)
T ss_pred ----------------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHH
Confidence 023344555667788888888899999999988655432 888889999999999999999
Q ss_pred HHHHHhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 006710 248 LVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (634)
Q Consensus 248 i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (634)
++|++.+..+++..|.+..++..+..+..+...+
T Consensus 143 l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 143 LSGPLLDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 9999999999999998887766555554444444
No 162
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.15 E-value=1.2e-09 Score=120.20 Aligned_cols=175 Identities=11% Similarity=0.038 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhH-----HHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYW-----TIAIFTTI 145 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~-----~i~~~~~~ 145 (634)
+|.+.+..++.....+.+..+++.|+.+++|++..+++...+.+.++..++.+++|+++||+ |||+ ........
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~ 332 (476)
T PLN00028 254 TWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQ 332 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHH
Confidence 34444444444555566777889999999999999999999999999999999999999998 8762 22211111
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
...+...+.+... .+....++..++.+++.+...+...++..+..| +.
T Consensus 333 ~l~~i~~~~~~~~--------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~----- 380 (476)
T PLN00028 333 TLGGVFCIWLGRA--------------------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS----- 380 (476)
T ss_pred HHHHHHHHHhccc--------------------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh-----
Confidence 1111111111100 233444444556666655555566666666654 45
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhc
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 280 (634)
|+...++.+.+.++|+.++|.+.+ .....+|..+|++.+++.+++.++.++.+
T Consensus 381 -~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 381 -LGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred -chhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 889999887777778777776543 22344699999988877777776666554
No 163
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.14 E-value=1.2e-09 Score=112.81 Aligned_cols=182 Identities=14% Similarity=-0.005 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
..|...+..+...-++-++..+++.|++++++.++.+++.....+.+...+..+++|+||||+ |.+|+.++..+..+++
T Consensus 219 ~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~~ 297 (417)
T COG2223 219 DTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMALA 297 (417)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHHH
Confidence 478888888888888889999999999999999999999999999999999999999999998 9999888888887777
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
..+..+... .... ..+...+++..+.+++..|.-.+.+..++...||++ -+.
T Consensus 298 ~~~l~~~~~--~~~~-------------------~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~ 349 (417)
T COG2223 298 AALLSLFLT--GFGH-------------------GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGA 349 (417)
T ss_pred HHHHHcccc--cccc-------------------CcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhH
Confidence 776665411 0000 023444444444555555555556666777777764 588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHHHHHhc
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGT 280 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~~ 280 (634)
..++.....++|+..-|...+...+..| +...|++...+.+++.+......
T Consensus 350 v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 350 VTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred HHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999999999999888887 88999988887777766554433
No 164
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.14 E-value=3.9e-09 Score=113.98 Aligned_cols=345 Identities=13% Similarity=0.095 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHhCCChh-HHHHHHHHH----HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhccc
Q 006710 88 LSVNMVTFMFYVMHKSFA-DSSNAVNNF----LGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVF 162 (634)
Q Consensus 88 ~~~~l~~yl~~~~~~s~~-~~~~~~~~~----~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~ 162 (634)
...+...+.....+.+.. ..+...... .+...+..++-|.++||+ |||..+.+..+...+..+...+.
T Consensus 40 ~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l~~~~~~~~------ 112 (463)
T KOG2816|consen 40 VMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGTILPALCLLFQ------ 112 (463)
T ss_pred chhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHHhHHHHHHH------
Confidence 335566666655554332 233333333 567788899999999998 99999999988887776666653
Q ss_pred CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhh--hchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHH
Q 006710 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGA--AGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTV 240 (634)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~--g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~l 240 (634)
. +++++ +.++.. +.......++++|....++ |...+++.+.+...
T Consensus 113 -----------------------~-~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~------R~~~~gll~~~~~~ 159 (463)
T KOG2816|consen 113 -----------------------G-YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE------RSSSIGLLSGTFGA 159 (463)
T ss_pred -----------------------H-HHHhh---hcccccchhhhhhhhhhheeeccchhH------HHHHHHHHHHHHHH
Confidence 2 33333 334333 3456788889999999998 99999999999999
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCC-cHHHHHHHHHHHHhhhcccccccccccc
Q 006710 241 GAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGS-PLTRVAQVLVAAFRKRHAAFSSSELIGL 319 (634)
Q Consensus 241 g~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~a~~~~~~~~p~~~~~~l 319 (634)
+..++|.+++++.+..|....|++..+..++..+-.....++...++.... +. +...|.+
T Consensus 160 ~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~--------------~~~~~~~----- 220 (463)
T KOG2816|consen 160 GLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATL--------------RELTPGS----- 220 (463)
T ss_pred HHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccc--------------cccCCCc-----
Confidence 999999999999999999999999988877777665555554332222110 00 0000000
Q ss_pred cccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHHHhhhhHH
Q 006710 320 YEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLS 399 (634)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~~~~ 399 (634)
..++.. ..+++..+. .+..|..+.+... .+...........
T Consensus 221 --------------------~~~~~~------------~~~~~~~~~--~~~~r~~l~l~l~-----~~~~~~~~~~~~~ 261 (463)
T KOG2816|consen 221 --------------------LDSSHV------------ADAFQSLTK--VGPDRLLLLLLLV-----AFLSSLPEAGGAS 261 (463)
T ss_pred --------------------ccchhh------------hhhhhhhcc--cCCCccchHHHHH-----HHHHHHHHhcCce
Confidence 000000 000000011 0111111111111 1111000000000
Q ss_pred HHHHhhcccCCCCccc-cCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 006710 400 VQQAYTMNTHMGKLKL-PVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFER 478 (634)
Q Consensus 400 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~ 478 (634)
-.........+ +|+. ..+.+.........+...+.. ++..+.. .....+.+|++.-.+.++++++...
T Consensus 262 ~~~~~yl~~~f-~w~~~~~s~~~~~~~~~~~i~~l~~~----~~l~~~l------~~~~~i~lGl~~~~~~~~~~af~~~ 330 (463)
T KOG2816|consen 262 DVLLLYLKAKF-GWNKKEFSDLLSLVSILGIISQLLLL----PLLSSIL------GEKRLISLGLLSEFLQLLLFAFATE 330 (463)
T ss_pred eEEEEEEeeec-CcCHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH------hhhhHhhHHHHHHHHHHHHHHHhcc
Confidence 00000011111 1111 111122222222222222222 2222211 1112588899999999888887641
Q ss_pred HHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 006710 479 YRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILN 558 (634)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~ 558 (634)
.|.............+..|...+++.....++.+|...++......+.+.+++.+.
T Consensus 331 ------------------------~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~ 386 (463)
T KOG2816|consen 331 ------------------------TWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALY 386 (463)
T ss_pred ------------------------chhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHH
Confidence 23333344556677788899999999999999999999999999999999999999
Q ss_pred HHhhccc
Q 006710 559 SIIKSVT 565 (634)
Q Consensus 559 ~~v~~~~ 565 (634)
+.+...+
T Consensus 387 ~~i~~~t 393 (463)
T KOG2816|consen 387 GNIFALT 393 (463)
T ss_pred HHHHHHH
Confidence 9876544
No 165
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.14 E-value=2e-09 Score=104.67 Aligned_cols=178 Identities=17% Similarity=0.119 Sum_probs=138.2
Q ss_pred ccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 006710 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (634)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~ 140 (634)
..........+|.+..+.++...+.+-..+.-+.+.++.+|+|+..++.+.+.........+++.|.++|++ ||+-..+
T Consensus 256 Ltdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv 334 (459)
T KOG4686|consen 256 LTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWV 334 (459)
T ss_pred cccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhH
Confidence 444445555688888888888888877778889999999999999999999999999999999999999998 9997766
Q ss_pred HHHHH-HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCC
Q 006710 141 IFTTI-YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDER 219 (634)
Q Consensus 141 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~ 219 (634)
.+..+ ..++..+++++ .+.-+++..++|+..........+.++-+.|++
T Consensus 335 ~~a~~~tl~~H~~l~Ft------------------------------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~ 384 (459)
T KOG4686|consen 335 ASACILTLLGHSGLFFT------------------------------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEE 384 (459)
T ss_pred HHHHHHHHHHhhhHHhh------------------------------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHH
Confidence 65544 45566666654 223355666778877776666777788888888
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc---hHHHHHHHHHHHHHHHHH
Q 006710 220 SKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG---WGSAFGALAIAMGISNML 275 (634)
Q Consensus 220 ~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~g---w~~~f~~~~~~~~i~~~~ 275 (634)
+ .|++++..+...|+|-++.|+++|.+.+.-| |--.|.+....+.+..+.
T Consensus 385 q------LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svg 437 (459)
T KOG4686|consen 385 Q------LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVG 437 (459)
T ss_pred H------hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHH
Confidence 8 9999999999999999999999999987654 555565555444444333
No 166
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.14 E-value=1.9e-09 Score=113.65 Aligned_cols=152 Identities=9% Similarity=0.004 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLS-VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
++......++....+++.. .+.+.|.++.+|.+..+.+.....+.++..++.++.|+++||+ |||+.+..+.++..++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 290 (365)
T TIGR00900 212 LRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGLA 290 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHH
Confidence 4445555555566665565 6677777777999999999999999999999999999999998 9999988887666666
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccch-hHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSW-QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~ 228 (634)
.....+. . +.+.+++..++.|++.+...+...+++.|.+|+++ |+
T Consensus 291 ~~~~~~~----------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g 336 (365)
T TIGR00900 291 ILVVGLT----------------------------PPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LG 336 (365)
T ss_pred HHHHHhh----------------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HH
Confidence 5555543 2 35667778889999999999999999999999988 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 006710 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (634)
Q Consensus 229 ~~~~~~~~~~~lg~~~~p~i~~~l~~~~g 257 (634)
+.+++++...++|..++|.++|++.+..|
T Consensus 337 ~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 337 RVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999987654
No 167
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.14 E-value=3.6e-09 Score=114.75 Aligned_cols=147 Identities=15% Similarity=0.035 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccC
Q 006710 84 AYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFM 163 (634)
Q Consensus 84 ~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~ 163 (634)
..+.+..+++.|+.+ .|.+..+.+...+.+.++..++.+++|+++||+ |||+.+..+.++..++..++....
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~------ 317 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIP------ 317 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHc------
Confidence 344566778888876 699999999999999999999999999999998 999999888876655544433220
Q ss_pred CCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHH
Q 006710 164 PNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI 243 (634)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 243 (634)
. .+...+.+..+..+++..+..+..+.++.|.+|++. |++++++.+....+|+.
T Consensus 318 -~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~ 371 (426)
T PRK12307 318 -Q-------------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGT 371 (426)
T ss_pred -c-------------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHH
Confidence 0 122222222222333334445667788899999998 99999999988899999
Q ss_pred HHHHHHHHHhhccchHHHHHH
Q 006710 244 VAFTLVVYIQMEHGWGSAFGA 264 (634)
Q Consensus 244 ~~p~i~~~l~~~~gw~~~f~~ 264 (634)
++|.+.+++.+..|+....++
T Consensus 372 ~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 372 FNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHHHHHHHHcccHHHHHHH
Confidence 999999999998886654333
No 168
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.12 E-value=1.3e-09 Score=117.83 Aligned_cols=164 Identities=8% Similarity=-0.074 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHH-HHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWT-IAIFTTIYL 147 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~-i~~~~~~~~ 147 (634)
.++...+..++....++++.+++|.|+++ ..|.+..+++.......++..++.+++|+++||+ |||+. +....++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 46677777778888889999999999977 3477888999999999999999999999999998 87764 333333333
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
++. .+.... .+....+.+..+.++|.....+.......|.+|+++ |
T Consensus 322 ~~~-~~~~~~---------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~ 367 (412)
T TIGR02332 322 AGW-LLASAT---------------------------DHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------R 367 (412)
T ss_pred HHH-HHHHhc---------------------------CCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------H
Confidence 322 111110 111112222223333333333444455577888888 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHH
Q 006710 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIA 268 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~ 268 (634)
++++++.+...++|..++|.+.+.+.+..| |++.|++.+++
T Consensus 368 ~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 368 AIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999999999999998775 99988876653
No 169
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.12 E-value=6.9e-09 Score=110.95 Aligned_cols=165 Identities=7% Similarity=-0.102 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
++......++....+.....+++.|+. +.|.+..+.+...+...++..+..++.|++.||+ |+|+.+.++.++..++.
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVVRW 284 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
Confidence 455555555555666667777888885 5899999999999988888888999999999998 99999999988887776
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
+++... .+.+.+++..++.|++.+...+....+..+. ++++ +++.
T Consensus 285 ~~~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~ 329 (382)
T PRK11128 285 GLMGST----------------------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRL 329 (382)
T ss_pred HHHHhh----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHH
Confidence 666554 5677788888999999998888888888776 5555 6777
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHH
Q 006710 231 FNFFY-LSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISN 273 (634)
Q Consensus 231 ~~~~~-~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~ 273 (634)
.+++. ....+|..+||.++|++.+..|+. .|+..+++.++++
T Consensus 330 ~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~ 372 (382)
T PRK11128 330 QALYSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHH
Confidence 88765 456788899999999999988874 5555555444443
No 170
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.12 E-value=9.9e-09 Score=110.64 Aligned_cols=171 Identities=11% Similarity=-0.110 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
++...+..++.....+......|.|+.+++|++..+.++......++..++.++.|+++||+ |||+.+.++.++..++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~ 295 (406)
T PRK15402 217 FVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 44444444444455555666678888889999999999888878888889999999999998 99999999988877777
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
.+...... ..+ .+...++++.++.|+|.+...+......... ++++ |++.
T Consensus 296 ~~~~~~~~---~~~--------------------~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~------~g~~ 345 (406)
T PRK15402 296 LLAALATV---ISS--------------------HAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS------KGTV 345 (406)
T ss_pred HHHHHHHH---ccc--------------------ccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc------ccHH
Confidence 76665311 000 2455667778889999888776665555433 3355 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHH
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~ 272 (634)
.+.++....+|..+|+.+.+++.+..++....+...+..++.
T Consensus 346 ~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 346 SAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 999999999999999999999988777665555544443333
No 171
>PRK10504 putative transporter; Provisional
Probab=99.11 E-value=5.8e-09 Score=114.78 Aligned_cols=156 Identities=10% Similarity=-0.026 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
+...+...++..+++.......+.|++..+|.+..++++....+.++..++.++.|+++||+ |||+++.++.++..++.
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~ 341 (471)
T PRK10504 263 FSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALVS 341 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHH
Confidence 44555666666666655556677888878999999999999888888888889999999998 99999998888777766
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
.++.+... . .+...+.+..++.|++.+...+....+..+.+|++. |+.+
T Consensus 342 ~~~~~~~~------~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~ 390 (471)
T PRK10504 342 LLFMLVAL------L-------------------GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSG 390 (471)
T ss_pred HHHHhccc------c-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccch
Confidence 55554210 0 223344455677888888888888999999999988 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccch
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~gw 258 (634)
+++++....+|..+|+.+++.+.+..|+
T Consensus 391 ~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 391 NSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999887665544
No 172
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.09 E-value=6.1e-09 Score=114.42 Aligned_cols=179 Identities=17% Similarity=0.079 Sum_probs=123.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHH-------
Q 006710 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI------- 139 (634)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i------- 139 (634)
+++.++...+..++....++.+..++|.|+.+.+|++..+.++..+...++..++.+++|+++||+ ++|+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~ 337 (465)
T TIGR00894 259 KSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARK 337 (465)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHH
Confidence 345678888888999999999999999999999999999999999999999999999999999997 644211
Q ss_pred -HHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCC
Q 006710 140 -AIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (634)
Q Consensus 140 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~ 218 (634)
..+......+..++..... . .+....++...+.+.+.++..+.......|..|.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~-----~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 392 (465)
T TIGR00894 338 IFNGIGGLGPGIFAYALPYL-----S--------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR 392 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHc-----C--------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh
Confidence 1111111111111111100 0 1223333444444555555555555555566654
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc---chHHHHHHHHHHHHHHHHHHHH
Q 006710 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH---GWGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~---gw~~~f~~~~~~~~i~~~~~~~ 278 (634)
. ++...++.+...++|+.++|.+.+++.+.. +|...|++.++..+++.+....
T Consensus 393 -~------~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 393 -F------LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred -H------HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 5 899999999999999999999999987643 4888888877776666555443
No 173
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.09 E-value=5.5e-09 Score=112.25 Aligned_cols=169 Identities=12% Similarity=0.081 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 006710 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVM---HKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (634)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~ 148 (634)
+..++..+.....+.....+.+.|+.+.+ +.+....+...+...+...++.++.|++.||+ |||+.+.++.++..+
T Consensus 218 ~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~l 296 (396)
T TIGR00882 218 WMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMSV 296 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHH
Confidence 33334444444444445556788887765 45566778888888888888999999999998 999999999888877
Q ss_pred HHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhh
Q 006710 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (634)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~ 228 (634)
+..+...+ .+.+.+++..++.|++..........+..+.++++. ++
T Consensus 297 ~~~~~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a 342 (396)
T TIGR00882 297 RIIGSSFA----------------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SA 342 (396)
T ss_pred HHHHHHhc----------------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EE
Confidence 76665543 456667778888998887776677777888888877 77
Q ss_pred hHHHH-HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q 006710 229 RFFNF-FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (634)
Q Consensus 229 ~~~~~-~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 275 (634)
+..+. ++....+|..++|.++|++.+..||+..|.+.+++.++..++
T Consensus 343 t~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 343 TIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred EeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 77766 667899999999999999999999999999877766555444
No 174
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.09 E-value=1.1e-08 Score=109.42 Aligned_cols=170 Identities=11% Similarity=-0.001 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 006710 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (634)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~ 151 (634)
+......++...+.+....+++.|+.+.+|++..+.++..+.+.++..++.++.|+++||+ |||+.+.++..+..++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~~ 280 (382)
T PRK10091 202 WLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLALL 280 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHHH
Confidence 3443444444455555566778888888999999999999999999999999999999998 999999988887777765
Q ss_pred HHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHH-HhhccCCCCCcchhhhhhhH
Q 006710 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSS-FGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~-~~ad~~~~~~~~~~~~r~~~ 230 (634)
++.... .+.+...+..++.+++.++..+.... ...+..+++. ++..
T Consensus 281 ~~~~~~---------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~ 327 (382)
T PRK10091 281 MLFFFG---------------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAA 327 (382)
T ss_pred HHHHHH---------------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHH
Confidence 544321 22334444445555655444443333 3334334333 4443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHHHH
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQME-HGWGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~-~gw~~~f~~~~~~~~i~~~~~~ 277 (634)
..+...++|..+||.++|++.+. .+|++.+.+.++..++.+....
T Consensus 328 --~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 328 --GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred --HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 33556789999999999998885 6799888887766555544433
No 175
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.07 E-value=1.2e-08 Score=109.26 Aligned_cols=174 Identities=7% Similarity=-0.085 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLG-ISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
++......++...+......+.+.|+.+ .|++.++.+++...... ...++.+++|++.||+ |+|+++.++.++..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 3444444455556666666777888875 79999999998888764 5667789999999998 9999998877665333
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCC-CCcchhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE-RSKDYKTHLD 228 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~-~~~~~~~~r~ 228 (634)
......... .... .+...++....+.+++.+...+...+...+..++ +. ++
T Consensus 288 ~~~~~~~~~-~~~~---------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g 339 (390)
T TIGR02718 288 ALLWFAQAA-FWLA---------------------PGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AG 339 (390)
T ss_pred HHHHHHHHH-cccC---------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hH
Confidence 222221100 0000 1223334444555666777777777777777765 56 89
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHH
Q 006710 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (634)
Q Consensus 229 ~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~ 274 (634)
+.+++++...++|..++|.++|++.+..|++..|++.+++.+++.+
T Consensus 340 ~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 340 TDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999989999888877765555443
No 176
>TIGR00895 2A0115 benzoate transport.
Probab=99.07 E-value=4.5e-09 Score=112.17 Aligned_cols=149 Identities=14% Similarity=0.024 Sum_probs=116.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 006710 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (634)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~ 147 (634)
++..+...+..++....++.+..+++ ++.+++|.+..+++...+.+.++..++.+++|+++||+ |||+.+....+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 326 (398)
T TIGR00895 249 ARITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAV 326 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHH
Confidence 34445555555666677777777777 77778999999999999999999999999999999998 99855444433333
Q ss_pred HHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhh
Q 006710 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (634)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r 227 (634)
+...+.... .+...+++..++.|++.+...+...+++.|.+|++. |
T Consensus 327 ~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 372 (398)
T TIGR00895 327 FAVLVGSTL----------------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------R 372 (398)
T ss_pred HHHHHHHHh----------------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------H
Confidence 222222211 344566677788999999999999999999999998 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Q 006710 228 DRFFNFFYLSVTVGAIVAFTLVVYI 252 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~~p~i~~~l 252 (634)
++++++++....+|..++|.++|++
T Consensus 373 g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 373 ATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 9999999999999999999999875
No 177
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.07 E-value=4.1e-09 Score=116.21 Aligned_cols=155 Identities=12% Similarity=0.092 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
++...+..++..+.+++...++|.|+++.+|.+..++++......++..++.+++|+++||+ |||+.+.++..+..++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~~~ 335 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAVGF 335 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHH
Confidence 45556666777788888888999999999999999999999999999999999999999998 99999999888877776
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
.++.+.. .+. .+.+.++...++.|+|.+...+.......+.+|+++ |+++
T Consensus 336 ~~~~~~~-----~~~-------------------~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~ 385 (485)
T TIGR00711 336 YWRAFTF-----TPD-------------------TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARG 385 (485)
T ss_pred HHHhccC-----CCC-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHH
Confidence 6655321 111 344556666788999999888777788888899888 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEH 256 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~ 256 (634)
.++++...++|+.+|+.+.+.+.++.
T Consensus 386 ~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 386 SSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998887643
No 178
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.03 E-value=5.4e-09 Score=116.02 Aligned_cols=173 Identities=16% Similarity=0.094 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH------------HHHHHHHHHHHHHHHHHHHhhhccchhHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSN------------AVNNFLGISQASSVLGGFLADAYLGRYWT 138 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~------------~~~~~~~~~~~~~l~~G~lsDr~~GRr~~ 138 (634)
.+.+....+...+.+|++..+.|.+++ +.|++..+++. ......++..++.+++++++||+ |||++
T Consensus 290 ~~~~~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~ 367 (502)
T TIGR00887 290 LLGTAGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPI 367 (502)
T ss_pred HHHHHHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhH
Confidence 333334445556778888888888875 67876543221 12233445556788999999998 99999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCC
Q 006710 139 IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (634)
Q Consensus 139 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~ 218 (634)
++++.++..++..++.+.... .+ .+ ..+....+...++..+..+....+.+|.+|+
T Consensus 368 l~~~~~~~~~~~~~l~~~~~~---~~--------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~ 423 (502)
T TIGR00887 368 QLMGFFILTVLFFVLGFAYNH---LS--------------------TH-GFLAIYVLAQFFANFGPNATTFIVPGEVFPT 423 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHh---cc--------------------hh-HHHHHHHHHHHHHhcCCCchhhhhhhccCch
Confidence 988887777666555543110 00 11 1111111122222333455667788999999
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc----------cchHHHHHHHHHHHHHHHHH
Q 006710 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME----------HGWGSAFGALAIAMGISNML 275 (634)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~----------~gw~~~f~~~~~~~~i~~~~ 275 (634)
+. |++++++.+....+|++++|.+.+++.+. .++...|++.++..+++.+.
T Consensus 424 ~~------R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 424 RY------RSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred hH------HHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 99 99999999999999999999999988763 23445666665555544443
No 179
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.02 E-value=7.9e-09 Score=106.94 Aligned_cols=174 Identities=13% Similarity=0.090 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.+..-+...++.+=+..++......|...++|++..+.......-.+..+++++++|+|.||+ |-|+++.++.+++.+.
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHH
Confidence 455666666776667777888889999999999999999999999999999999999999998 9999999999888776
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
.+...+. .....+++.-++.|+..|+.++..-++.+++.|+++ -++
T Consensus 332 ~~~~~~~----------------------------~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~ 377 (438)
T COG2270 332 ALYLIFL----------------------------EGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGR 377 (438)
T ss_pred HHHHHHc----------------------------cccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccc
Confidence 5555543 223444555568999999999999999999999999 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHHHHH
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~ 278 (634)
+|++|.+..-..+.+||.+.+.+.+.+| -|..+....++..++++++..
T Consensus 378 fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~ 427 (438)
T COG2270 378 FFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLR 427 (438)
T ss_pred eeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEe
Confidence 9999999999999999999998887665 676766655555555555433
No 180
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.02 E-value=1.9e-08 Score=110.86 Aligned_cols=163 Identities=9% Similarity=-0.054 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCC
Q 006710 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (634)
Q Consensus 87 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (634)
.+..+.+ ++.+++|.+.....+......+...++.+++|+++||+ |||++++.+.++..++.++++..... +.
T Consensus 289 ~~~~~~p-~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~----~~- 361 (479)
T PRK10077 289 VVLYYAP-EIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYT----QA- 361 (479)
T ss_pred HHHHHHH-HHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhc----Cc-
Confidence 3333334 44467898887777777778888889999999999998 99999999999888887776643110 00
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhhc-hhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHH
Q 006710 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAG-IRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (634)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~ 245 (634)
.. .....+.++.+++.+. ..|+..+++.|.+|++. |++++++.+...++|..++
T Consensus 362 ------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~ 416 (479)
T PRK10077 362 ------------------PG-IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFV 416 (479)
T ss_pred ------------------cc-HHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHH
Confidence 11 1223333444444443 34778899999999988 9999999888888888777
Q ss_pred HHHHH------HHhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 006710 246 FTLVV------YIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (634)
Q Consensus 246 p~i~~------~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (634)
+.+.+ ++.+..+|++.|++.++..+++.+..+...+
T Consensus 417 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (479)
T PRK10077 417 SWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVP 458 (479)
T ss_pred HHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccc
Confidence 55544 4446788888888877665555555444333
No 181
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.02 E-value=1.2e-08 Score=110.99 Aligned_cols=160 Identities=16% Similarity=0.062 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.++..++..++..++++......+.|++..++ +..+.++......++..++.++.|+++||+ |||+++.++.++..++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 300 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVLG 300 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 35556666666667766655555555555555 566677777888899999999999999998 9999999998888777
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcch-hhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY-KTHLD 228 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~-~~~r~ 228 (634)
.+.+.+.. .+...+++..++.|++.+...+...++++|..+.++.+. ...++
T Consensus 301 ~~~~~~~~---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 353 (437)
T TIGR00792 301 YLIFFFAG---------------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEG 353 (437)
T ss_pred HHHHHHcc---------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchH
Confidence 66655430 234556666778899999999999999999876332110 01178
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccch
Q 006710 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (634)
Q Consensus 229 ~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw 258 (634)
..++++++...+|..+++.+.|++.+..||
T Consensus 354 ~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 354 LVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 889999999999999999999998876665
No 182
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.02 E-value=2.8e-08 Score=109.67 Aligned_cols=169 Identities=10% Similarity=0.045 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 006710 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (634)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~ 153 (634)
+++..++..+....+...+|.+..+.+|.+....|++.+.+.+|..++.++.+++.+|+ ++++.+..+.+++.++.+.+
T Consensus 223 ~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~l 301 (524)
T PF05977_consen 223 VLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLL 301 (524)
T ss_pred HHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHH
Confidence 33444444444445556678888999999999999999999999999999999999997 99999999988888877777
Q ss_pred HHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHH
Q 006710 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (634)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 233 (634)
+++ .+.+...+..++.|++.........+.+-+..|++. ||+.+++
T Consensus 302 al~----------------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si 347 (524)
T PF05977_consen 302 ALS----------------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSI 347 (524)
T ss_pred hcc----------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHH
Confidence 775 567777788889999999888888899999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q 006710 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 234 ~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 277 (634)
++.....+..+|.++.|++.+..|-+..+.+.++..++..++..
T Consensus 348 ~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 348 YQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988888877766555554443
No 183
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.02 E-value=9e-09 Score=114.05 Aligned_cols=153 Identities=13% Similarity=0.052 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.+....+..++..+++++...+++.|+++.+|.|+.+++.....+.++..++.+++|++.||+ |||+.+..+.++..++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~~ 338 (495)
T PRK14995 260 IILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSALS 338 (495)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 355556666777777888888899999999999999999999999999999999999999998 9999998888887777
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
.+++..... . .+.+..++..++.|+|.|...+.......+..|+++ ++.
T Consensus 339 ~~~l~~~~~------~-------------------~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~ 387 (495)
T PRK14995 339 FYGLAMTDF------S-------------------TQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAA 387 (495)
T ss_pred HHHHHHhcC------C-------------------CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cch
Confidence 665544210 0 233445667788999999988888888889999988 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQM 254 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~ 254 (634)
+.++++...++|..+|+.+.+.+.+
T Consensus 388 ~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 388 AGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988754
No 184
>PRK10133 L-fucose transporter; Provisional
Probab=99.01 E-value=2.2e-08 Score=108.98 Aligned_cols=164 Identities=10% Similarity=0.022 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 006710 74 IFGNEMAERMAYFGLSVNMVTFM-FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (634)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~ 152 (634)
..+..++.....++...+++.|+ ++.+|+++.++++....+.++..++.+++|+++||+ |||+++..+.++..++..+
T Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~ 341 (438)
T PRK10133 263 AVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLI 341 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHH
Confidence 33444555566666777888886 557899999999999999999999999999999998 9999998887776655544
Q ss_pred HHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHH
Q 006710 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (634)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 232 (634)
..+. .+. ..+....+.|++.+...|+..+...+.++++. +.+.+
T Consensus 342 ~~~~----------------------------~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-------~~as~ 385 (438)
T PRK10133 342 SAFA----------------------------GGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-------KYGSS 385 (438)
T ss_pred HHHc----------------------------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-------ccchh
Confidence 4332 121 22455678999999999999999999987643 33333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHH
Q 006710 233 FFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNML 275 (634)
Q Consensus 233 ~~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~ 275 (634)
+... ..+|+.++|.+.|++.+..| -+..|++..++.+..+..
T Consensus 386 l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 386 FIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 3332 33678888889999998887 788888766655444433
No 185
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.00 E-value=4.4e-08 Score=104.32 Aligned_cols=162 Identities=14% Similarity=0.087 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 006710 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (634)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~ 151 (634)
+...+...+....++....+.+.|+.+++|.++.+.+.+...+.++..++.+++|+++||+ |||+.+..+.++..++..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~ 287 (385)
T TIGR00710 209 WGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSAV 287 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHH
Confidence 3333444445556666777788899889999999999999999999999999999999998 999999988887777766
Q ss_pred HHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHH
Q 006710 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (634)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 231 (634)
++...... +. .....+++..++.|++.+...+.......|.+| ++ |++..
T Consensus 288 ~~~~~~~~----~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~ 337 (385)
T TIGR00710 288 LLEITAIL----GL-------------------GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTAS 337 (385)
T ss_pred HHHHHHHh----cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHH
Confidence 66553210 00 123444555677889989888888888888886 45 88899
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHhhccchHHHHHHH
Q 006710 232 NFFYLSVTV-GAIVAFTLVVYIQMEHGWGSAFGAL 265 (634)
Q Consensus 232 ~~~~~~~~l-g~~~~p~i~~~l~~~~gw~~~f~~~ 265 (634)
++++..... |+..+|+ .+.+.+..+|...+...
T Consensus 338 ~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~~ 371 (385)
T TIGR00710 338 ALFGTLRLVLGAIVGYL-VSLIHGNTAWPMSLSCL 371 (385)
T ss_pred HHHHHHHHHHHHHHHHH-HHhccccChHHHHHHHH
Confidence 987776544 5555554 45555555555444433
No 186
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.99 E-value=7e-08 Score=103.66 Aligned_cols=164 Identities=10% Similarity=-0.010 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
++......++...+.++...+++.++.+++|++..+.+.....+.++..++.++.|++.||. +|+ .++.+.++..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~-~l~~~~~~~~~~~ 295 (394)
T PRK10213 218 VMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKL-ALAGAPLVLAVSA 295 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chh-HHHHHHHHHHHHH
Confidence 44444444555555666666665555567899999999999999999999999999999995 554 4344434333332
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
.++.... .+.+.+.+..++.|++.+...+...+++.+..|+ + +++.
T Consensus 296 ~~l~~~~---------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~------~~~~ 341 (394)
T PRK10213 296 LVLTLWG---------------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-Q------AEKA 341 (394)
T ss_pred HHHHHHh---------------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-c------HHHH
Confidence 2222210 3456666777889999999999888888888874 3 4556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHH
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMG 270 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~ 270 (634)
.+++....++|..+||.++|++.+..|++..++..++..+
T Consensus 342 ~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~ 381 (394)
T PRK10213 342 GSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLML 381 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHH
Confidence 6666677789999999999999998898888877665443
No 187
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.99 E-value=6.3e-08 Score=104.27 Aligned_cols=152 Identities=14% Similarity=0.185 Sum_probs=104.0
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHH-HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcc
Q 006710 91 NMVTFMFYVMHKSFADSSNAVNNFL-GISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (634)
Q Consensus 91 ~l~~yl~~~~~~s~~~~~~~~~~~~-~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (634)
+.+.|+.+++|++.++.+++..... ++..++.+++|+++||+ |||+.+.++.++..+..+.+.+.... +
T Consensus 231 ~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~----~----- 300 (402)
T PRK11902 231 LSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVT----P----- 300 (402)
T ss_pred HHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhc----C-----
Confidence 4455777889999999999886654 46788999999999998 99998887777665554433321110 0
Q ss_pred cccccccCCCCCccchhHHHHHHHH----HHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHH
Q 006710 170 DRISQLLGSCEPAKSWQMLYLYTVL----YITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (634)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~ 245 (634)
.+.+.+++.. +..|++.+...+....++.+.+|.++ + +++....++|..++
T Consensus 301 ---------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~l~~~~~ 355 (402)
T PRK11902 301 ---------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y----ALLSALASVGRVYV 355 (402)
T ss_pred ---------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H----HHHHHHHHHHHHHH
Confidence 1234444443 34556666667777777777776554 4 34444445666666
Q ss_pred HHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q 006710 246 FTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 246 p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 277 (634)
+.++|++.+..||+..|.+.+++.++++++..
T Consensus 356 ~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 356 GPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 66899999999999999988877766655543
No 188
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.99 E-value=5.1e-11 Score=131.64 Aligned_cols=201 Identities=15% Similarity=0.109 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 006710 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (634)
Q Consensus 76 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~ 155 (634)
+..+.. ...++......+-+.+.|+++.+++|++.+.+-++..+..++..++++|- -|-|.+-++.++..+|.+++++
T Consensus 10 ~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 10 LLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFAL 87 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhc
Confidence 333444 55556666667788999999999999999999999999999999999985 6778888999999999999887
Q ss_pred hhhhc-ccCCC------------CCccc-----ccccccCCC----CCccchhHHHHHHHHHHHHHhhhchhhhHHHHhh
Q 006710 156 CATMK-VFMPN------------QDNCD-----RISQLLGSC----EPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGA 213 (634)
Q Consensus 156 ~~~~~-~~~~~------------~~~~~-----~~~~~~~~~----~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a 213 (634)
..+.. ...+. .+.|. +...+...| +.....-...++++.++.|+|....++...+|+=
T Consensus 88 Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiD 167 (539)
T PF03137_consen 88 PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYID 167 (539)
T ss_dssp ----------------------------------------------------------------SSS-------------
T ss_pred cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeec
Confidence 53321 11000 11120 000001111 1222223467788999999999999999999999
Q ss_pred ccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh---------------------ccc-hHHHHHHHHHHHHH
Q 006710 214 DQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM---------------------EHG-WGSAFGALAIAMGI 271 (634)
Q Consensus 214 d~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~---------------------~~g-w~~~f~~~~~~~~i 271 (634)
|-.+++. -...+++++.+..+|+++|.++++.+.. +.| ||.+|.+.+.+.++
T Consensus 168 Dnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l 241 (539)
T PF03137_consen 168 DNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFL 241 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 9999988 7888999999999999999988875431 123 88888888877666
Q ss_pred HHHHHHHhccccc
Q 006710 272 SNMLFFIGTPLYR 284 (634)
Q Consensus 272 ~~~~~~~~~~~~~ 284 (634)
..+.+++..|+.+
T Consensus 242 ~aipl~~FPk~lp 254 (539)
T PF03137_consen 242 SAIPLFFFPKKLP 254 (539)
T ss_dssp -------------
T ss_pred HHHHHHcCCccCC
Confidence 6666665555443
No 189
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.98 E-value=4.2e-08 Score=105.91 Aligned_cols=183 Identities=13% Similarity=-0.020 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
.|...+..++...+|.++..++|.|+++.+ +.........+..+...+..|++|+||||+ |++|++.++.++..++.
T Consensus 254 ~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~~ 330 (462)
T PRK15034 254 LWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIFS 330 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHHH
Confidence 677777777777777777778999988865 333333344556778888999999999998 99999999988777766
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcc--------
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD-------- 222 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~-------- 222 (634)
.++.+.. +.. ...+...+.+..+.+.++.|.-.+.+..++.+.||+++.+
T Consensus 331 ~~~~l~l--p~~--------------------~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~ 388 (462)
T PRK15034 331 ALLFLTL--PGT--------------------GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGS 388 (462)
T ss_pred HHHHHHh--ccc--------------------cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccc
Confidence 5443321 100 0134566666655555666666677777777777741100
Q ss_pred -------hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHHHHH
Q 006710 223 -------YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 223 -------~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~ 278 (634)
.++.-+...++......+|+.+-|.+.+...+..| +...|+...+..++.+++.+.
T Consensus 389 ~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 389 DEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred hhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 11125667777778888999999977777665544 778888777766655555443
No 190
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.98 E-value=2.1e-08 Score=122.72 Aligned_cols=163 Identities=10% Similarity=-0.013 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChh-HHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFA-DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~-~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
++..++..++..+..+.+..+++.|+.+.+|++.. +.+++.+.+.++..++.+++|+++||+ ++++++.++.++..++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~ 312 (1146)
T PRK08633 234 LWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALS 312 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHH
Confidence 34444444444555556777889999999999999 999999999999999999999999998 9999888888877777
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
.+++.+. .+.+.++++.++.|++.++..+...+++.+.+|++. |++
T Consensus 313 ~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~ 358 (1146)
T PRK08633 313 LFLLPTA----------------------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGK 358 (1146)
T ss_pred HHHHHHh----------------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhh
Confidence 6666654 455667777788999999988999999999999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHH
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIA 268 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~-~~gw~~~f~~~~~~ 268 (634)
+++++++..++|..+++.+++.+.. ..++...|++.+.+
T Consensus 359 ~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 359 VLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 9999999999999888877776644 23455555554433
No 191
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.97 E-value=1.3e-06 Score=89.62 Aligned_cols=156 Identities=17% Similarity=0.125 Sum_probs=108.6
Q ss_pred HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccc
Q 006710 96 MFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQL 175 (634)
Q Consensus 96 l~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (634)
+-+++|++..+.+.+.........+..++.|.++||+ |||+..++.++++.+..+.--.
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~-------------------- 118 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS-------------------- 118 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc--------------------
Confidence 3467999999999999999999999999999999998 9999999999998877643322
Q ss_pred cCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHH-HHHHHHHHHHHHHHHHHhh
Q 006710 176 LGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY-LSVTVGAIVAFTLVVYIQM 254 (634)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~-~~~~lg~~~~p~i~~~l~~ 254 (634)
.+...++++|++-|++......+-.+.+.....++.-+ ....+.-++... +...+-+..+.+++.++.+
T Consensus 119 ---------~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~-~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~ 188 (354)
T PF05631_consen 119 ---------SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFP-QEWLSDTFSLATFFGNGVVAIGAGVVANVLAD 188 (354)
T ss_pred ---------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHH
Confidence 57899999999999999999888877764333332211 011333333222 2222334444455556666
Q ss_pred ccch--HHHHHHHHHHHHHHHHHHHHhccc
Q 006710 255 EHGW--GSAFGALAIAMGISNMLFFIGTPL 282 (634)
Q Consensus 255 ~~gw--~~~f~~~~~~~~i~~~~~~~~~~~ 282 (634)
..+. ..+|..+.++.+++.++.....++
T Consensus 189 ~~~~g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 189 WFGFGPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred HhCCCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 5543 678888887777776665544443
No 192
>PRK10054 putative transporter; Provisional
Probab=98.96 E-value=2.1e-08 Score=107.70 Aligned_cols=172 Identities=12% Similarity=-0.006 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYV--MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~ 148 (634)
++...+..++..+.+.....+.+.|+... .+.+....+.....+.+......++.|++.||+ |||+.+..+.++..+
T Consensus 208 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~~ 286 (395)
T PRK10054 208 LLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFVI 286 (395)
T ss_pred ehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHHH
Confidence 33344445555555544555666776543 455566677777777777777778889999998 999999999888777
Q ss_pred HHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhh
Q 006710 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (634)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~ 228 (634)
+...+.+.. .+.+.+.++.++.|+|.+...|...+++.+..|++. |+
T Consensus 287 ~~~~~~~~~---------------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~ 333 (395)
T PRK10054 287 GLVGFIFSG---------------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KA 333 (395)
T ss_pred HHHHHHHcc---------------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ce
Confidence 776665431 245556667789999998888888899999999888 88
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q 006710 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 229 ~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 277 (634)
+.++... ...+|..+||.++|++.+..|....|++.+....+++++.+
T Consensus 334 ~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 334 SYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred ehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 8887654 56689999999999999999988888776665555555444
No 193
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.95 E-value=3.6e-08 Score=104.17 Aligned_cols=152 Identities=14% Similarity=0.045 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
.+......++....++++..++|.|+++ .|.+..+++...+.+.++..++.++.|+++||+-+||+++.++.++..++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 277 (355)
T TIGR00896 199 AWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGL 277 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Confidence 4555555566677788888899999875 799999999999999999999999999999997245667777777777776
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
..+.+. .+.... ...++.|++.|...+...+...+..++++. ++..
T Consensus 278 ~~~~~~----------------------------~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~-----~g~~ 323 (355)
T TIGR00896 278 CGLLFA----------------------------PMHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQ-----AAAL 323 (355)
T ss_pred HHHHHh----------------------------hhhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHH-----HHHH
Confidence 655553 111111 134578999999888887777766654331 6788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~g 257 (634)
+++.+...++|..++|.+.|++.+..|
T Consensus 324 ~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 324 SAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888888888999999999999988776
No 194
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.95 E-value=4e-08 Score=105.79 Aligned_cols=153 Identities=11% Similarity=0.025 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCC
Q 006710 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (634)
Q Consensus 87 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (634)
....++|.|+++..+ ++.+.++..+...++...+....+++.||.++.++.+..+.++..++..++...
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~---------- 294 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV---------- 294 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh----------
Confidence 345567888877655 667788887777666655554455555543376777777777777776666554
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 006710 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (634)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p 246 (634)
.+...+++...+.+++.+...|...+++.|..|+++ |++.+++++...++|..+||
T Consensus 295 ------------------~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~ 350 (400)
T PRK11646 295 ------------------SNLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGY 350 (400)
T ss_pred ------------------hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcc
Confidence 345556666677888888888899999999999998 99999999999999999999
Q ss_pred HHHHHHhhcc---c-hHHHHHHHHHHHHHHHH
Q 006710 247 TLVVYIQMEH---G-WGSAFGALAIAMGISNM 274 (634)
Q Consensus 247 ~i~~~l~~~~---g-w~~~f~~~~~~~~i~~~ 274 (634)
.++|++.+.. + ....+++..+..++..+
T Consensus 351 ~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (400)
T PRK11646 351 IGGGWLFDLGKALNQPELPWMMLGIIGLITLL 382 (400)
T ss_pred cchHHHHHHHhhcCCcchHHHHHHHHHHHHHH
Confidence 9999998764 2 24455444444444433
No 195
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.88 E-value=1.5e-07 Score=100.05 Aligned_cols=165 Identities=10% Similarity=-0.034 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchh---HHHHH-HHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY---WTIAI-FTTI 145 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr---~~i~~-~~~~ 145 (634)
.++.+....++....+|++..|+|.|+.+ .|++.. .+....+..+... +..++++||. .|| +.... ..++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~~-~r~~~r~~~~~~~~~~ 266 (368)
T TIGR00903 193 DLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGL---IGVAVIPDRV-ARAGLRSIYIRAAALL 266 (368)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHH---HHHHHhhHHh-hhhhhHHHHHHHHHHH
Confidence 46778888889999999999999999964 678765 4544444444443 4458888886 543 33222 3322
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
..+........ .+....++...+.+++.....+...++.+|.+|++.
T Consensus 267 ~a~~~~~~~~~----------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~----- 313 (368)
T TIGR00903 267 IAAFFLALAFE----------------------------LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL----- 313 (368)
T ss_pred HHHHHHHHHHc----------------------------cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh-----
Confidence 22222222221 122333444456667777777888899999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (634)
|+++.++.+...++|+..+|.+.+.+.. +-...|.+.++..+++.+..
T Consensus 314 -rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 314 -HGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred -cCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998887763 55566666655555554443
No 196
>TIGR00898 2A0119 cation transport protein.
Probab=98.87 E-value=4.3e-08 Score=108.90 Aligned_cols=131 Identities=14% Similarity=0.047 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHH
Q 006710 112 NNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLY 191 (634)
Q Consensus 112 ~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (634)
....+...++.+++++++||+ |||+++.++.++..++.+++.+... ......+
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~--------------------------~~~~~~~ 414 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPV--------------------------DLYFLRT 414 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCC--------------------------CchHHHH
Confidence 344566677889999999998 9999999998877777666555310 1123344
Q ss_pred HHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHH
Q 006710 192 TVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGI 271 (634)
Q Consensus 192 ~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i 271 (634)
+..++.+++.+...+....+.+|.+|++. |++++++.+....+|+.++|.+.+ +. ..++...+++.++..++
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~ 486 (505)
T TIGR00898 415 ALAVLGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALL 486 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHH
Confidence 44456667777778888999999999998 999999999999999999999888 43 34566666666655555
Q ss_pred HHHHHH
Q 006710 272 SNMLFF 277 (634)
Q Consensus 272 ~~~~~~ 277 (634)
+.++.+
T Consensus 487 ~~~~~~ 492 (505)
T TIGR00898 487 AGILTL 492 (505)
T ss_pred HHHHHH
Confidence 544443
No 197
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.85 E-value=7.2e-08 Score=117.87 Aligned_cols=183 Identities=6% Similarity=-0.168 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
++...+..++..+.++++..++|.|+.+.+|.+..+++++.+.+.++..++.++.|+++|+. ++++.+.++.++..++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 305 (1140)
T PRK06814 227 IWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLFG 305 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHHH
Confidence 55566666666677777888999999999999999999999999999999999999999987 76666666655554444
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
+.+.+.... ...+..+.+.- .+=. ...+.+.++++.++.|++.+...+...+++.+.+|++. |++.
T Consensus 306 ~~l~~~~~~-~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v 371 (1140)
T PRK06814 306 LDLAFASSS-VPAEPAQLKSI------LVFL-SKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARV 371 (1140)
T ss_pred HHHHhcccc-cccccccccch------hhhh-cccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceee
Confidence 433331000 00000000000 0000 00234566777888999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHH
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIA 268 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~-~~gw~~~f~~~~~~ 268 (634)
++.++...++|..+++++.+.+.+ ..++...|++.+++
T Consensus 372 ~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 372 IAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 999999999999999999988874 34566665554443
No 198
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.85 E-value=8.8e-08 Score=101.22 Aligned_cols=145 Identities=10% Similarity=0.031 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHH-HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFL-GISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~-~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~ 148 (634)
.++...+..++..++++....+++.|+.+ +|++.++.+.+.+... ++..++.+++|+++||+ |||+.+.++.++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 35666666677788888888999999987 9999999998888765 56788999999999998 999999888887766
Q ss_pred HHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhh
Q 006710 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (634)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~ 228 (634)
+..+..+........ + -+..+.+.++.+.++.+++.+...+...+++.|.+|++. |+
T Consensus 288 ~~~~~~~~~~~~~~~----~-------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g 344 (356)
T TIGR00901 288 TNAGFVWLASNGHHD----G-------------ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GA 344 (356)
T ss_pred HHHHHHHHHhcCccc----c-------------cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cH
Confidence 655444321000000 0 000134556677788899999999999999999999999 99
Q ss_pred hHHHHHHHHHH
Q 006710 229 RFFNFFYLSVT 239 (634)
Q Consensus 229 ~~~~~~~~~~~ 239 (634)
+.+++++...+
T Consensus 345 ~~~g~~~~~~~ 355 (356)
T TIGR00901 345 TQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHh
Confidence 99999876654
No 199
>PRK09848 glucuronide transporter; Provisional
Probab=98.85 E-value=5.8e-08 Score=106.19 Aligned_cols=161 Identities=14% Similarity=0.113 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
++...+..++...+++......+.|+++.+|.+....++......++..++.++.++++||+ |+|+++.++.++..++.
T Consensus 230 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i~~ 308 (448)
T PRK09848 230 LFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTCGY 308 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 55555666666677666666667778878888776666555555667778899999999998 99999999998888877
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcch-hhhhhh
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY-KTHLDR 229 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~-~~~r~~ 229 (634)
+.+.+. +. .+.+.+++..++.|+|.+...+...++.+|..|.++.+. ...++.
T Consensus 309 ~~~~~~-------~~-------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~ 362 (448)
T PRK09848 309 LLFFWV-------SV-------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGL 362 (448)
T ss_pred HHHHHc-------Cc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhH
Confidence 666543 11 345666677788999999999999999999988653211 111588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccch
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~gw 258 (634)
.++.+++...+|.++|+.+.+.+.+..|+
T Consensus 363 ~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 363 TYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88899999999999999998877654443
No 200
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.84 E-value=1.7e-07 Score=100.99 Aligned_cols=194 Identities=14% Similarity=0.069 Sum_probs=131.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~ 145 (634)
+.++..++.+...+...+.......+..+.+-+..|++..++.++.........+..+++.++-||+ |||+.++++..+
T Consensus 266 ~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~ 344 (485)
T KOG0569|consen 266 TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSL 344 (485)
T ss_pred chhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHH
Confidence 3444566666666666655544444446666778899999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhh-chhhhHHHHhhccCCCCCcchh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAA-GIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g-~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
..+..+++............ .-....+++.++..++.+ +.-|...-+.+|++|++.
T Consensus 345 ~~~~~~~~~~~~~l~~~~~~-------------------~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~---- 401 (485)
T KOG0569|consen 345 MAVALLLMSIALFLSNSFGS-------------------WLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA---- 401 (485)
T ss_pred HHHHHHHHHHHHHHHHHhhh-------------------HHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc----
Confidence 88887777765332110000 011122344433333333 335777888999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccccC
Q 006710 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR 286 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 286 (634)
|..++++-+....+...+-.+.--.+.+..|- ..|.+..+..++..+..+...|+.+.+
T Consensus 402 --R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 402 --RSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 99999997776666666555555556666664 556555566666666666666665543
No 201
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.83 E-value=5.4e-08 Score=98.31 Aligned_cols=145 Identities=12% Similarity=0.127 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HhCCCh--hHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFY-----------------VMHKSF--ADSSNAVNNFLGISQASSVLGGFLAD 130 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-----------------~~~~s~--~~~~~~~~~~~~~~~~~~l~~G~lsD 130 (634)
..+....+-|..++.||++.-......+. ..+-.. ..--.=..+-.+..+-|.++.|++-|
T Consensus 327 ttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~ive 406 (528)
T KOG0253|consen 327 TTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVE 406 (528)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHH
Confidence 35666777888899999876542222211 111111 11111123345566788999999999
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHH
Q 006710 131 AYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSS 210 (634)
Q Consensus 131 r~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~ 210 (634)
|+ |||+++..+.+++.+.++++..+- +++ .-..+++.+|+++ .+...+.+.
T Consensus 407 rl-GRKkTMal~l~~f~iflfll~~c~-----------------------~rn-~~tvllf~arafi----sg~fqvaYv 457 (528)
T KOG0253|consen 407 RL-GRKKTMALSLILFGIFLFLLTTCK-----------------------TRN-AYTVLLFTARAFI----SGAFQVAYV 457 (528)
T ss_pred Hh-cchhHHHHHHHHHHHHHHHHHHhc-----------------------Ccc-hhHHHHHHHHHHH----hchheEEEE
Confidence 97 999999999999998887777641 111 2224455566544 444566778
Q ss_pred HhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 006710 211 FGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (634)
Q Consensus 211 ~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~ 249 (634)
|..|.+|+.. |+.+.|.-..+.-+|+.+.|.++
T Consensus 458 YtPEVyPTav------RatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 458 YTPEVYPTAV------RATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred ecCcccchhh------hhcchhhhhhHHhhhhhhhhHHH
Confidence 9999999999 99999999999999999999888
No 202
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.80 E-value=4.4e-07 Score=97.43 Aligned_cols=157 Identities=6% Similarity=-0.068 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhccc
Q 006710 83 MAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVF 162 (634)
Q Consensus 83 ~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~ 162 (634)
.........++.|+++.+|.++.+.+.....+.++..++.++.+++.||. ++++++..+..+ .+....+...
T Consensus 219 ~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~------ 290 (393)
T PRK11195 219 GAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQ------ 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHH------
Confidence 34444555667788888999999999999999999999999999999997 998888777532 2222222222
Q ss_pred CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHH
Q 006710 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (634)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 242 (634)
.+.+...+..++.|++.+...+...+.+.+..|++. ++++.+++.+...++|.
T Consensus 291 ----------------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~ 343 (393)
T PRK11195 291 ----------------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAM 343 (393)
T ss_pred ----------------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHH
Confidence 345555666778899988888878888877644432 16899999999999999
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q 006710 243 IVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (634)
Q Consensus 243 ~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 275 (634)
.++..+.+.+ +..|-++.+++.....++.+.+
T Consensus 344 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 344 LLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred HHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHH
Confidence 9999888865 5677666666655554444443
No 203
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.79 E-value=1.3e-07 Score=103.96 Aligned_cols=176 Identities=14% Similarity=0.101 Sum_probs=146.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc--hhHHHHHHHHHH
Q 006710 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG--RYWTIAIFTTIY 146 (634)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~G--Rr~~i~~~~~~~ 146 (634)
+.++...+...+..++++.-..+++.|.. ..+++..+++.++++..+...++.++.|+++|+. . ++.+..++.++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 45777888888888999888888898887 8899999999999999999999999999999987 6 334444555555
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
.++...+++. .++..++..-++.|++.|......+..+.|+...++
T Consensus 376 gl~~~~~p~~----------------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------ 421 (509)
T KOG2504|consen 376 GLARLFLPFA----------------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------ 421 (509)
T ss_pred HHHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------
Confidence 5555444444 566777777789999999999999899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHHHHHhc
Q 006710 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGT 280 (634)
Q Consensus 227 r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~~ 280 (634)
...++++......++..+||.++|++.+.++ |...|+..++..+++.+..+...
T Consensus 422 l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 422 LSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred cchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999999999988887 99999998888777776655443
No 204
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.79 E-value=3.7e-08 Score=103.29 Aligned_cols=142 Identities=19% Similarity=0.240 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-hhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 006710 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKS-FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (634)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s-~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~ 151 (634)
......+...+.++....+++.|+.+.+|.+ ..+.+...+...+...++.++.|+++||+ |+|+...+......++.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~ 288 (352)
T PF07690_consen 210 ILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGAL 288 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHH
Confidence 3444444555566678888999989999999 78999999999999999999999999998 988888877777666665
Q ss_pred HHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHH
Q 006710 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (634)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 231 (634)
.+.+.... .+....++..++.|++.+...+...+++.|.+|+++ |++..
T Consensus 289 ~~~~~~~~-------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 337 (352)
T PF07690_consen 289 GLLLLPFS-------------------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAF 337 (352)
T ss_dssp HHCCSHHH-------------------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHH
T ss_pred HHHHHHHh-------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHH
Confidence 55543210 244566667788999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHHH
Q 006710 232 NFFYLSVTVGAIVAF 246 (634)
Q Consensus 232 ~~~~~~~~lg~~~~p 246 (634)
++++...++|..+||
T Consensus 338 g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 338 GLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCC
Confidence 999999999999987
No 205
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.79 E-value=5.6e-07 Score=91.52 Aligned_cols=168 Identities=15% Similarity=0.103 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
.|.+.+..-+.++.+|.+..|+|.++. +.|+|..++++.++...+......++.-++++|.-.+|+..+..+..+.+|.
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~ 288 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGL 288 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence 677777777888999999999999886 5799999999999999999999999999999987678899999999999998
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
..+.+.. .+...+. .+++|+|.|+..|....++.+..++.+. -++.
T Consensus 289 ~G~~~~P---------------------------~~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~-----Aa~L 334 (395)
T COG2807 289 VGLLLAP---------------------------GQLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAI-----AAAL 334 (395)
T ss_pred HHHHHhh---------------------------hhHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHH-----HHHH
Confidence 8887751 1222222 4799999999999999999998776541 3333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHH
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISN 273 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~ 273 (634)
-++-+-...+=+++||.+.|++.|..| |....+..+...++..
T Consensus 335 SgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~ 378 (395)
T COG2807 335 SGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLML 378 (395)
T ss_pred HHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHH
Confidence 444444455667789999999998775 8776665554443333
No 206
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.78 E-value=3e-07 Score=99.94 Aligned_cols=160 Identities=14% Similarity=0.102 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
......+..++..++........+.|.+..+|.+ ...+.....+.++..++.++.++++||+ |||+++..+.++..++
T Consensus 226 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~~ 303 (428)
T PF13347_consen 226 PFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAALG 303 (428)
T ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHHH
Confidence 4666777778888888777777788888888877 5667777888999999999999999998 9999999999999998
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcch-hhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY-KTHLD 228 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~-~~~r~ 228 (634)
.++..+... .+.+.+++..++.|++.+...+...++++|..+.++.+. +...+
T Consensus 304 ~~~~~~~~~--------------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g 357 (428)
T PF13347_consen 304 FLLLFFLGP--------------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREG 357 (428)
T ss_pred HHHHHHHHh--------------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchH
Confidence 888777621 367888888899999999999999999999998543221 11257
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 006710 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (634)
Q Consensus 229 ~~~~~~~~~~~lg~~~~p~i~~~l~~~~g 257 (634)
..++.+.+...+|.++++.+.+.+.+..|
T Consensus 358 ~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 358 MYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 77888889999999999998887765443
No 207
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.77 E-value=1.1e-06 Score=93.56 Aligned_cols=147 Identities=10% Similarity=-0.089 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 006710 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (634)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~ 151 (634)
+...+..++...+.+....+.+.++.+++|++..+.+.......++..++.+++|+++||+ |||+++.++.++..+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~ 275 (377)
T PRK11102 197 LGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGI 275 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHH
Confidence 3333444444555556666677788888999999999999999999999999999999998 999999988876544333
Q ss_pred HHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHH
Q 006710 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (634)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 231 (634)
.+...... + .+.+.+.++..+.+.+.+...+.......|..| +. |++..
T Consensus 276 ~~~~~~~~----~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~ 324 (377)
T PRK11102 276 WLVVSALL----D--------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTAS 324 (377)
T ss_pred HHHHHHHH----h--------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHH
Confidence 32221100 0 233344444444555555556666677778776 55 78888
Q ss_pred HHHHH-HHHHHHHHHHHHHH
Q 006710 232 NFFYL-SVTVGAIVAFTLVV 250 (634)
Q Consensus 232 ~~~~~-~~~lg~~~~p~i~~ 250 (634)
++++. ...+|+.+++++++
T Consensus 325 ~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 325 SLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 87555 34566777765543
No 208
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.75 E-value=1e-06 Score=94.35 Aligned_cols=69 Identities=13% Similarity=0.060 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 006710 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (634)
Q Consensus 87 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~ 156 (634)
....+.+.|+.+++|++..+.+.......++..++.++.|+++||+ |||+++.++.++..++.+.+.+.
T Consensus 221 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 221 TFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444557788888999999999999999999999999999999998 99999999988888877776664
No 209
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.75 E-value=1.8e-06 Score=91.87 Aligned_cols=137 Identities=12% Similarity=0.211 Sum_probs=96.3
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCC
Q 006710 419 CMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMP 498 (634)
Q Consensus 419 ~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (634)
...+.+-..-+++-++..+++.++++-. .+.+|+.+..+=++.+...+
T Consensus 410 v~~a~~~~gEI~~~ffs~klI~kiGHv~-----------v~~lgLa~~~~Rf~~~S~L~--------------------- 457 (618)
T KOG3762|consen 410 VVSALCHAGEILFYFFSFKLIEKIGHVN-----------VMYLGLACNVGRFLYYSYLQ--------------------- 457 (618)
T ss_pred ehhhhhccchHHHHHHHHHHHHHhcccc-----------eeeehhhHHHHHHHHHHHhc---------------------
Confidence 3344444444555556666665555442 36677777766666666553
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHH-HhHHHHHHHHHHHHHhhcccCCCCCCCCCccc
Q 006710 499 DLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAAL-AGGLGCFAASILNSIIKSVTGNPKKGQPNWLA 577 (634)
Q Consensus 499 ~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~-~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~ 577 (634)
++|..++.=++.|+..+.+.....+|+...+|++++..+.++... ..++|..+|+++++.+....+
T Consensus 458 --n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg----------- 524 (618)
T KOG3762|consen 458 --NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG----------- 524 (618)
T ss_pred --CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh-----------
Confidence 567777878899999999999999999999999999999999884 458888888888887655322
Q ss_pred cCCccchhhHHHHHHHHHHHHHHHHHHHhh
Q 006710 578 QNINTGRFDYLYWLLAVLSVINFCAFLYSA 607 (634)
Q Consensus 578 ~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~ 607 (634)
....|+..++.+++.++++..+-
T Consensus 525 -------~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 525 -------ARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHHhh
Confidence 23467777776666655555443
No 210
>PRK11043 putative transporter; Provisional
Probab=98.74 E-value=1.7e-06 Score=92.94 Aligned_cols=148 Identities=11% Similarity=-0.004 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhc
Q 006710 81 ERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMK 160 (634)
Q Consensus 81 ~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~ 160 (634)
....++....+.+.|++ ++|++..+.++....+.++..++.++++++.||+ |||+.+....++..++.+.+.+....
T Consensus 215 ~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 291 (401)
T PRK11043 215 CSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLL- 291 (401)
T ss_pred HHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 33445556666777775 5899999999888888888889999999999998 99998776666555554433322110
Q ss_pred ccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHH
Q 006710 161 VFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTV 240 (634)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~l 240 (634)
.. .+...+++...+.|++.+...+...+...|..| ++ |+++.++++.....
T Consensus 292 ---~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~~~~~~~ 342 (401)
T PRK11043 292 ---SH-------------------PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QA------TGKAAALQNTLQLG 342 (401)
T ss_pred ---cc-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-cc------ChHHHHHHHHHHHH
Confidence 00 233445555667888888888888888878776 45 89999998887777
Q ss_pred HHHHHHHHHHHHhhccchHH
Q 006710 241 GAIVAFTLVVYIQMEHGWGS 260 (634)
Q Consensus 241 g~~~~p~i~~~l~~~~gw~~ 260 (634)
++.+++.+.+.+.+......
T Consensus 343 ~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 343 LCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHHccCCChhHH
Confidence 88888888888876443333
No 211
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.74 E-value=1.5e-05 Score=85.39 Aligned_cols=80 Identities=20% Similarity=0.251 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHH
Q 006710 111 VNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYL 190 (634)
Q Consensus 111 ~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (634)
..+-.....+..++++.+-|++ |.|..+.++...+....+.... .|-..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~-----------------------------~N~y~~ 105 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLF-----------------------------PNSYYL 105 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHh-----------------------------cchHHH
Confidence 5555666778889999999987 9999999999988877666655 466888
Q ss_pred HHHHHHHHHhhhchhhhHHHHhhccCCCCC
Q 006710 191 YTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (634)
Q Consensus 191 ~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~ 220 (634)
+++-.+.|+|.+..+.-...++.|..+++.
T Consensus 106 yfssallG~Gaallw~GqG~ylt~~st~~t 135 (461)
T KOG3098|consen 106 YFSSALLGFGAALLWTGQGGYLTSNSTRET 135 (461)
T ss_pred HHHHHHhhhhHHheecccceehhhcCChhh
Confidence 899999999999999999999999998887
No 212
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.72 E-value=2.3e-08 Score=104.35 Aligned_cols=148 Identities=16% Similarity=0.137 Sum_probs=122.0
Q ss_pred cCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccC
Q 006710 416 PVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLT 495 (634)
Q Consensus 416 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (634)
..+.++....+...++.|+++.+.||+-|+.. +.+|..+-.++++..++..
T Consensus 69 ~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v-----------~~vG~~iW~~Av~~~~fs~------------------ 119 (493)
T KOG1330|consen 69 ELGLLQTVFIVVFMIASPLFGYLADRYNRKRV-----------IAVGIFIWTLAVFASGFSN------------------ 119 (493)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHhhcCcceE-----------EeeHHHHHHHHHHHHHHHH------------------
Confidence 34566777777888999999999998877744 8889999988888777663
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCc
Q 006710 496 AMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNW 575 (634)
Q Consensus 496 ~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w 575 (634)
..|.+++.-.+.|+||....|...+++.+.+|...|+++.+++++...+|+.+|......+...++ .|
T Consensus 120 -----~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-------~W 187 (493)
T KOG1330|consen 120 -----HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-------WW 187 (493)
T ss_pred -----HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc-------ce
Confidence 467777888899999999999999999999999999999999999999999999888877766543 24
Q ss_pred cccCCccchhhHHHHHHHHHHHHHHHHHHHhhccceecc
Q 006710 576 LAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYRS 614 (634)
Q Consensus 576 ~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~~~~ 614 (634)
++.|+..+++.++..++..++.++-.++.
T Consensus 188 ----------r~af~~~avl~vi~~~L~~~f~~eP~rga 216 (493)
T KOG1330|consen 188 ----------RWAFRGSAVLGVIVGLLVFLFVREPERGA 216 (493)
T ss_pred ----------EEEEEeehHHHHHHHHHHHhhccCccccc
Confidence 56788899999988888877776554433
No 213
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.69 E-value=1e-06 Score=97.16 Aligned_cols=165 Identities=12% Similarity=-0.008 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 006710 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (634)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~ 148 (634)
|.++..++..++..++.+......+.|.+..++ +....+.+.+...++..++.++.++++||+ |||++++++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 556677777777777776666665544443333 555666677767788889999999999998 999999988887666
Q ss_pred HHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcch-hhhh
Q 006710 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY-KTHL 227 (634)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~-~~~r 227 (634)
+.+....... .+. .+.+.+++..++.|++.+...+...++++|..+.++.+. +...
T Consensus 309 ~~~~~~~~~~----~~~-------------------~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~ 365 (473)
T PRK10429 309 SCGVLLLMGL----AAP-------------------HNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCE 365 (473)
T ss_pred HHHHHHHHhc----cCc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccch
Confidence 6555443211 011 345566666778899999999999999999977432110 0013
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccch
Q 006710 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (634)
Q Consensus 228 ~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw 258 (634)
+..+++..+...+|.++++.+.|++.+..|+
T Consensus 366 G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 366 SIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5577778888999999999999887654443
No 214
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.68 E-value=9.3e-07 Score=78.93 Aligned_cols=134 Identities=16% Similarity=0.218 Sum_probs=98.6
Q ss_pred chhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcch
Q 006710 422 VFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLS 501 (634)
Q Consensus 422 ~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 501 (634)
....+..++..++.+++.||++||. .+..+..+..++.+...... +
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~-----------~~~~~~~~~~~~~~~~~~~~-----------------------~ 50 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKP-----------VLLVGLFIFVLSTAMFALSS-----------------------N 50 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhH-----------HHHHHHHHHHHHHHHHHHhc-----------------------c
Confidence 3445666778888888888887763 25566666666655544321 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCc
Q 006710 502 AYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNIN 581 (634)
Q Consensus 502 ~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~ 581 (634)
.+.+....++.+++.+...+....++.+..|++.|++++++.+....++..+++.+.+.+.+.. +|
T Consensus 51 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~~------ 116 (141)
T TIGR00880 51 ITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL--------GW------ 116 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc--------ch------
Confidence 4556666788899999999999999999999999999999999999999999999998775422 23
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhh
Q 006710 582 TGRFDYLYWLLAVLSVINFCAFLYSA 607 (634)
Q Consensus 582 ~~~~~~~f~~~a~~~~v~~~~~~~~~ 607 (634)
+..|++.+++.++..+..+++.
T Consensus 117 ----~~~~~~~~~~~~~~~~~~~~~~ 138 (141)
T TIGR00880 117 ----RAPFLFLAILALAAFILLAFLL 138 (141)
T ss_pred ----HHHHHHHHHHHHHHHHHHhhcC
Confidence 4566766666666655555443
No 215
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.67 E-value=3.1e-06 Score=90.69 Aligned_cols=178 Identities=9% Similarity=0.020 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
++..++..++...+.-....+...|+++.-+.+....+...++..+.-.+.-.+.+++-.|+ |-|++++++.+.+++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 33344444555555655667788898765557777778777777888888889999999998 99999999999888876
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
.+.+.... |. ........++..++|+..|........++.+..|++. |.++
T Consensus 288 ~l~a~~~~-----~~------------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~ 338 (400)
T PF03825_consen 288 LLYAYFSD-----PW------------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATA 338 (400)
T ss_pred HHHHHhcC-----Cc------------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHH
Confidence 66665411 00 0111223344567999999999999999999999999 9999
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhhccchH------HHHHHHHHHHHHHHHHHHH
Q 006710 231 FNFFYL-SVTVGAIVAFTLVVYIQMEHGWG------SAFGALAIAMGISNMLFFI 278 (634)
Q Consensus 231 ~~~~~~-~~~lg~~~~p~i~~~l~~~~gw~------~~f~~~~~~~~i~~~~~~~ 278 (634)
.+++.. ...+|..+|..++|++.+.+|-+ ..+.+.+...++..+++..
T Consensus 339 Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 339 QGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 999877 56899999999999999877643 3444444444444444443
No 216
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.66 E-value=1.4e-06 Score=93.97 Aligned_cols=162 Identities=9% Similarity=-0.058 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYV-MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.+...+..++......++.++++.|+.+. .+.+...++...+.+.....++.+++|+++||+ ++|+++.++.++..+.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 33444455555455556778889998653 255555666677777788899999999999998 9999988888777766
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
.++..+. .+. ....+..+.|++.+.++|...+...+..+++. +..
T Consensus 313 ~ll~~~~----------------------------~~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~~~ 357 (410)
T TIGR00885 313 CLGSIFA----------------------------GGH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------KYG 357 (410)
T ss_pred HHHHHHc----------------------------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhh
Confidence 6666553 122 23456678889999999999999999998765 322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc------chHHHHHHHHHHHH
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEH------GWGSAFGALAIAMG 270 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~------gw~~~f~~~~~~~~ 270 (634)
.. ...++ .+|+++.|.+.|++.|.. +.+..|+++.++.+
T Consensus 358 s~-~l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 358 AA-GLVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred HH-HHHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 22 22223 399999999999999854 47788887766543
No 217
>PRK09669 putative symporter YagG; Provisional
Probab=98.64 E-value=1.2e-06 Score=95.70 Aligned_cols=160 Identities=11% Similarity=0.012 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
.+.+++..++...+...... +..|..+..--+.+..+.......+...++.+++++++||+ |||+.+.++.++..++.
T Consensus 231 ~~~l~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~ 308 (444)
T PRK09669 231 WRIMFIFNVVLLTAVVTRGG-ATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILS 308 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 33344444444444432223 33444333222334444555566677788889999999998 99999998877655433
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcch-hhhhhh
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY-KTHLDR 229 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~-~~~r~~ 229 (634)
....+. +. .+.+.+++..++.|++.+...+...++++|..+.++.+. +...+.
T Consensus 309 ~~~~~~-------~~-------------------~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~ 362 (444)
T PRK09669 309 ALIFFI-------PP-------------------SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGL 362 (444)
T ss_pred HHHHHh-------Cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchH
Confidence 322221 11 355667777788999999999999999999987443211 111456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccch
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~gw 258 (634)
.++.+.+...+|.++|+.++|++.+..|+
T Consensus 363 ~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 363 VFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77888889999999999999988765554
No 218
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.64 E-value=8.5e-07 Score=96.39 Aligned_cols=182 Identities=16% Similarity=0.166 Sum_probs=120.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccch----hHHHHHHHH
Q 006710 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR----YWTIAIFTT 144 (634)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GR----r~~i~~~~~ 144 (634)
..+|.+.+..+....+++.+..++|.|+.+.+|++..+.|+..++-.+...+..+++|.+|||..-| +.+..+...
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 3589999999999999999999999999999999999999999999999999999999999997221 112222222
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
+-..+..++.+... ..+ |. .. ......+.++..+.|+..++..-+ ..|..|.+
T Consensus 338 i~~~~~ai~l~~l~---~~~----~~----------~~-~~a~~~l~~~~~~~g~~~~Gf~~~----~~~~apq~----- 390 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLA---FTS----DE----------HR-LLAVILLTIAIGLSGFNISGFYKN----HQDIAPQH----- 390 (466)
T ss_pred HHHHHHHHHHHeee---ecC----CC----------cc-hHHHHHHHHHHHHcccchhhhHhh----hhhccchH-----
Confidence 21222111111100 111 00 00 011122222222333333332222 22324433
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc---cchHHHHHHHHHHHHHHHHHHHHh
Q 006710 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQME---HGWGSAFGALAIAMGISNMLFFIG 279 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~---~gw~~~f~~~~~~~~i~~~~~~~~ 279 (634)
-+..+++.+...++.+.++|.+.+.+..+ ..|+..|++.+++.+++.+.+.+.
T Consensus 391 --a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 391 --AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 58889999999999999999999998842 369999999998888777665543
No 219
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.57 E-value=7e-05 Score=79.00 Aligned_cols=155 Identities=8% Similarity=-0.011 Sum_probs=107.3
Q ss_pred HHHHHHHHHH-hCCChhHHH-HHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCC
Q 006710 90 VNMVTFMFYV-MHKSFADSS-NAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (634)
Q Consensus 90 ~~l~~yl~~~-~~~s~~~~~-~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (634)
+++..|++++ .|++..+.. -+.-.+.-......++...++|.. |-|++++++.+..++...++.+.
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~----------- 91 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFG----------- 91 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHH-----------
Confidence 5788999987 899998875 333344445556677888899976 99999999988888777776665
Q ss_pred cccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHH
Q 006710 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (634)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~ 247 (634)
.+...+-+.-++-|++.+. ..+..+++=-..|+++ =.+..++...+.-+|..++.+
T Consensus 92 -----------------~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~ 147 (412)
T PF01770_consen 92 -----------------TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSL 147 (412)
T ss_pred -----------------CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 5677888888888888766 4455566656666655 445555555566666666666
Q ss_pred HHHHHhh--ccchHHHHHHHHHHHHHHHHHHHHhc
Q 006710 248 LVVYIQM--EHGWGSAFGALAIAMGISNMLFFIGT 280 (634)
Q Consensus 248 i~~~l~~--~~gw~~~f~~~~~~~~i~~~~~~~~~ 280 (634)
++-.+.. ..++....++......+++++.++..
T Consensus 148 lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 148 LGQLLVSFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6554443 34566777777777767766655543
No 220
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.57 E-value=3e-06 Score=93.32 Aligned_cols=187 Identities=11% Similarity=0.080 Sum_probs=128.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH----HHHHHHHHHHHHHHHHHHHH----HHhhhccchhHHH-
Q 006710 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD----SSNAVNNFLGISQASSVLGG----FLADAYLGRYWTI- 139 (634)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~----~~~~~~~~~~~~~~~~l~~G----~lsDr~~GRr~~i- 139 (634)
+.++.++...++....+....+.++.|..+..+.+... .++..+.-.+...+..++.. ++.||-.+.+...
T Consensus 272 ~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k 351 (475)
T TIGR00924 272 YAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLK 351 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHH
Confidence 34455555555666666666777888887765544222 45666655555555555544 4555421333433
Q ss_pred -HHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCC
Q 006710 140 -AIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (634)
Q Consensus 140 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~ 218 (634)
.+|.++..++...+++...... . +...+.+++++..++.++|.....|...++.++..|+
T Consensus 352 ~~~G~~l~~~~~~~~~~~~~~~~--~-----------------~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~ 412 (475)
T TIGR00924 352 FTLGMLFCGASFLTFAASIWFAD--A-----------------GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQ 412 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC--C-----------------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCH
Confidence 6778887777777665311100 0 0115788899999999999999999999999999999
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhc
Q 006710 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (634)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 280 (634)
+. |++.++++..+..+|..+++.+........+|...|...++.+++..++++...
T Consensus 413 ~~------~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 413 RL------MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HH------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 99 999999999999999999998888776666788877776666555555554433
No 221
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.56 E-value=5.6e-07 Score=95.21 Aligned_cols=139 Identities=11% Similarity=-0.000 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
.+...+..++.....+.+..+++.|+++.+|++..+++.....+.+...++.+++|+++||+ |||+.+..+..+..++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGA 305 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHH
Confidence 44444555555566677888899999999999999999999999999999999999999998 99988888777666665
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
.++.+... +. .+...+++..++.+++.|...+...++.+|.+| ++ +++.
T Consensus 306 ~~~~~~~~-----~~-------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~g~~ 354 (366)
T TIGR00886 306 FLVVLGLV-----SP-------------------LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RA------TGAV 354 (366)
T ss_pred HHHHhcCC-----Cc-------------------chHHHHHHHHHHHHHHhccccchhhhcchhhch-hh------cccH
Confidence 55544310 00 144445555556666666666777788888887 45 8999
Q ss_pred HHHHHHHHHHH
Q 006710 231 FNFFYLSVTVG 241 (634)
Q Consensus 231 ~~~~~~~~~lg 241 (634)
.++.+...++|
T Consensus 355 ~g~~~~~~~~g 365 (366)
T TIGR00886 355 SGLVGAIGNLG 365 (366)
T ss_pred HHHHHHhccCC
Confidence 98877766665
No 222
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.55 E-value=9.9e-06 Score=86.87 Aligned_cols=140 Identities=12% Similarity=-0.044 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCC
Q 006710 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (634)
Q Consensus 88 ~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (634)
.....+.|+++.+|.+..+.++.......+..++.++.+++.||+ ||+.... .....++.+....... . ..
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~~--~~~~~~~~~~~~~~~~---~-~~-- 296 (394)
T PRK11652 226 FEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQS--VICCLLAGLLMWIPGW---F-GV-- 296 (394)
T ss_pred HHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHH---h-cc--
Confidence 344556788888999999999988888888888888899999987 7433332 2222222222211100 0 00
Q ss_pred cccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHH
Q 006710 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (634)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~ 247 (634)
.+.+.++++..+.|++.+...|...++..|.+|+ + +++..++.+...++|..+++.
T Consensus 297 -----------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~------~g~~~~~~~~~~~lg~~~~~~ 352 (394)
T PRK11652 297 -----------------MNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-L------AGTAGALLGGLQNIGSGLAAL 352 (394)
T ss_pred -----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c------chHHHHHHHHHHHHHHHHHHH
Confidence 2345566777889999999999999999998874 5 788888988888999999999
Q ss_pred HHHHHhhccchHH
Q 006710 248 LVVYIQMEHGWGS 260 (634)
Q Consensus 248 i~~~l~~~~gw~~ 260 (634)
+++++.....+..
T Consensus 353 ~~~~~~~~~~~~~ 365 (394)
T PRK11652 353 LSAMLPQTGQFSL 365 (394)
T ss_pred HHHHccCCchHHH
Confidence 9998876544443
No 223
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.54 E-value=9.5e-06 Score=85.93 Aligned_cols=177 Identities=8% Similarity=0.069 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMH---KSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~ 146 (634)
.+|...+........|+..-...+.|.+..++ .++...|.+.+.-.+.-++.-.+..++-+|+ |.|+.++++.++.
T Consensus 221 ~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~i~ 299 (412)
T PF01306_consen 221 NFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGVIM 299 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHHHH
Confidence 45555554444444454444446778876554 3445678888888888889999999999998 9999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
++=.++++++ .+.+.+.+.+.+.|+-.+.......-|+++.+|++-
T Consensus 300 ~iRi~~~~~~----------------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------ 345 (412)
T PF01306_consen 300 AIRIIGSGFA----------------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------ 345 (412)
T ss_dssp HHHHHHHHT------------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------
T ss_pred HHHHHHHhhh----------------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------
Confidence 8888888887 678889999999999999999999999999999987
Q ss_pred hhhHHHH-HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 006710 227 LDRFFNF-FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (634)
Q Consensus 227 r~~~~~~-~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (634)
..+...+ ++.+..+|..+.+.++|++.|+.|.+..|++.+.+++...++..+..+
T Consensus 346 sAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 346 SATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 7788877 466889999999999999999999998998877766555555444443
No 224
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.52 E-value=6e-06 Score=89.28 Aligned_cols=140 Identities=14% Similarity=0.026 Sum_probs=103.4
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCc
Q 006710 420 MPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPD 499 (634)
Q Consensus 420 ~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (634)
...+..+...+..++.+.+.||++||. .+..+.++.+++.+.....
T Consensus 56 ~~s~~~~~~~~~~~~~G~l~dr~Grr~-----------~l~~~~~~~~~~~~~~~~a----------------------- 101 (413)
T PRK15403 56 SVSLYLAGGMALQWLLGPLSDRIGRRP-----------VLITGALIFTLACAATLFT----------------------- 101 (413)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHcCchH-----------HHHHHHHHHHHHHHHHHHc-----------------------
Confidence 334445666677888899999998884 3666777766666555433
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccC
Q 006710 500 LSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQN 579 (634)
Q Consensus 500 ~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~ 579 (634)
.+.+++++.-++.|+++++..+.....+.+..|++.+++++++.+....++..+++.+.+.+.+.. +|
T Consensus 102 ~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~--------gw---- 169 (413)
T PRK15403 102 TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV--------HW---- 169 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------CH----
Confidence 256677777888899998777777788888999999999999999999999999999988765522 35
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHhhccce
Q 006710 580 INTGRFDYLYWLLAVLSVINFCAFLYSAYRYK 611 (634)
Q Consensus 580 ~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~ 611 (634)
++.|++.+++.++..+..++..++++
T Consensus 170 ------~~~f~~~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 170 ------KVLFAIIAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 56788777777776665555555543
No 225
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.47 E-value=1.7e-05 Score=78.68 Aligned_cols=181 Identities=10% Similarity=0.076 Sum_probs=117.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 006710 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (634)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~ 146 (634)
||..+.....+..+.. ..|....+ ...+++.+|+|.+|...+...-.++..++ ++.|.+.|++ |.+.++++|.+..
T Consensus 1 rW~~l~a~~~v~~~~G-t~Y~Fs~y-S~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~ 76 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSG-TTYTFSAY-SPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLG 76 (250)
T ss_pred ChhhHHHHHHHHHhcC-cccchhhh-hHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHH
Confidence 4554444444433332 33444433 56788999999999999999999999875 8889999998 9999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
.+|..++.++..-. .+. ...+.+.+..++.|.+.+...........+.||. +
T Consensus 77 ~~GY~~~~l~~~~~--i~~-------------------~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------ 128 (250)
T PF06813_consen 77 FVGYGLLWLAVSGR--IPS-------------------LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------ 128 (250)
T ss_pred HHHHHHHHHHHhCc--cCc-------------------cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------
Confidence 99999988763211 010 3455666666666677666655555666688985 5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHh
Q 006710 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (634)
Q Consensus 227 r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 279 (634)
||+..++.--...+++.+-..+...+-....-...+.+.....++.++..++.
T Consensus 129 RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 129 RGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred cCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhe
Confidence 89999887666666666555444433333222333333333344444443333
No 226
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.46 E-value=1.2e-05 Score=81.29 Aligned_cols=140 Identities=21% Similarity=0.275 Sum_probs=108.4
Q ss_pred HHHHhCCCh--hHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccc
Q 006710 96 MFYVMHKSF--ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRIS 173 (634)
Q Consensus 96 l~~~~~~s~--~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (634)
...+++.+. ...++..+.+.+...++.++.|.++||+ |||+.+..+.....++.+.+.+...
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~--------------- 91 (338)
T COG0477 28 LLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN--------------- 91 (338)
T ss_pred HHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc---------------
Confidence 334455454 5789999999999999999999999998 9998888888765555455554310
Q ss_pred cccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCC-CCcchhhhhhhHHHHHHH-HHHHHHHHHHHHHHH
Q 006710 174 QLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE-RSKDYKTHLDRFFNFFYL-SVTVGAIVAFTLVVY 251 (634)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~-~~~~~~~~r~~~~~~~~~-~~~lg~~~~p~i~~~ 251 (634)
.+...+++.|+++|++.+...+...+++.|.+|. +. |+...+.... ...+|..++|.+++.
T Consensus 92 -----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (338)
T COG0477 92 -----------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGALGLALGPLLAGL 154 (338)
T ss_pred -----------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2467888899889999999999999999999998 44 8888888777 578888888877776
Q ss_pred Hhhc--cchHHHHHHHHHH
Q 006710 252 IQME--HGWGSAFGALAIA 268 (634)
Q Consensus 252 l~~~--~gw~~~f~~~~~~ 268 (634)
+... .+|++.|.+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 155 LLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHhcchHHHHHHHHHH
Confidence 6543 5788866555444
No 227
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.43 E-value=0.0012 Score=70.78 Aligned_cols=190 Identities=11% Similarity=-0.061 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
.+.+-...++.+.+--+.-...+.|+..-+.-+---.+..-..-.+...++.+..|..-||. -|.+++..+.+..-+..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHH
Confidence 45555666666666655555667788776543433333333344555667777888899998 99999998887766555
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCc-cchhHHHHHHHHHHHH-HhhhchhhhHHHHhhccCCCCCcchhhhhh
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPA-KSWQMLYLYTVLYITG-FGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g-~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~ 228 (634)
...+.....-...+. ... +..-...+++...+.| +..-.......+.=-|+...=..+....+.
T Consensus 83 ~~s~~~~~~l~~~~~--------------~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La 148 (432)
T PF06963_consen 83 AASCALFLLLLSYPS--------------SSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALA 148 (432)
T ss_pred HHHHHHHHHHHhCCc--------------cccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHH
Confidence 444432111111110 000 0011122222222222 222122222223333443211111111133
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q 006710 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (634)
Q Consensus 229 ~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 275 (634)
+.-+...-.=.+--.+||++.|.+....+......+.++..++++.+
T Consensus 149 ~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 149 RMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 33333333334567889999999988888877766666665555554
No 228
>PRK11462 putative transporter; Provisional
Probab=98.42 E-value=2.8e-05 Score=85.36 Aligned_cols=157 Identities=10% Similarity=0.016 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 006710 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (634)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~ 152 (634)
.++...++..++..........|.+..+| +....+.+...+.++..++.+++++++||+ |+|+++..+..+..+..++
T Consensus 232 ~l~~~~~~~~~~~~~~~~~~~y~~~y~~g-~~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~ 309 (460)
T PRK11462 232 IVGLLTIFNILAVCVRGGAMMYYVTWILG-TPEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLA 309 (460)
T ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHH
Confidence 33334444444443333333333333344 344455677778888889999999999998 9998877555544333333
Q ss_pred HHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh-hhhHH
Q 006710 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH-LDRFF 231 (634)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~-r~~~~ 231 (634)
..+. +. .+...+++..++.|++.+...+...++++|..+-++-+.-.. -+..+
T Consensus 310 ~~~~-------~~-------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~ 363 (460)
T PRK11462 310 MFFV-------PM-------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISF 363 (460)
T ss_pred HHHh-------ch-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHH
Confidence 2221 10 223334445566788877777777888888877432111000 23445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc
Q 006710 232 NFFYLSVTVGAIVAFTLVVYIQMEHG 257 (634)
Q Consensus 232 ~~~~~~~~lg~~~~p~i~~~l~~~~g 257 (634)
+.+.+...+|.++++.++|++.+..|
T Consensus 364 a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 364 AGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 66667888888888888877654333
No 229
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.41 E-value=1e-06 Score=90.41 Aligned_cols=146 Identities=17% Similarity=0.157 Sum_probs=124.6
Q ss_pred ccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccc
Q 006710 415 LPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFL 494 (634)
Q Consensus 415 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (634)
...+.+....++..++..|+.+.++||++.|.. +.+|++++..+-+++++.+
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ip-----------m~~Gl~vmf~sTilFafg~----------------- 157 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDRIGYKIP-----------MVAGLFVMFLSTILFAFGN----------------- 157 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHHhccccH-----------HHHHHHHHHHHHHHHHHcc-----------------
Confidence 345666777888899999999999999888854 8999999999999988775
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhh-HHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCC
Q 006710 495 TAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAM-KSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQP 573 (634)
Q Consensus 495 ~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~-rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~ 573 (634)
++..+++.-.+.|+|..+..+...+.+.+.+|++. ||.++|+......+|..+|+-+++++++..|
T Consensus 158 ------sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G------- 224 (464)
T KOG3764|consen 158 ------SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG------- 224 (464)
T ss_pred ------hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-------
Confidence 56678888999999999999999999999999986 6999999999999999999999999988655
Q ss_pred CccccCCccchhhHHHHHHHHHHHHHHHHHHHhhcccee
Q 006710 574 NWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKY 612 (634)
Q Consensus 574 ~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~~ 612 (634)
..--|+++++++++...+-+++.+.++.
T Consensus 225 -----------k~aPFlVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 225 -----------KSAPFLVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred -----------CcCcHHHHHHHHHHHHHHHHheeCcccc
Confidence 1234899999999988888877765543
No 230
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.36 E-value=3.6e-05 Score=80.34 Aligned_cols=167 Identities=16% Similarity=0.133 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhh
Q 006710 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCAT 158 (634)
Q Consensus 79 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~ 158 (634)
++..++++.-=..+-+|--+.||++..+.......+..+..++..+.|++..|-.+++++..+++.+..++..+..++..
T Consensus 218 ~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~ 297 (403)
T PF03209_consen 218 FLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP 297 (403)
T ss_pred HHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445554444556788889999999999999999999999999999998885459999999999998888877777643
Q ss_pred hcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHH
Q 006710 159 MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSV 238 (634)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~ 238 (634)
. .+.+.+..+.+++|++.|.+.....+.+-|+..+++ -+..++.|..+.
T Consensus 298 ~-------------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQ 346 (403)
T PF03209_consen 298 L-------------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQ 346 (403)
T ss_pred c-------------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHH
Confidence 1 456788899999999999999888888999998888 889999999999
Q ss_pred HHHHHHHHHHHHHHhhc----------cchHHHHHHHHHHHHHHHHHH
Q 006710 239 TVGAIVAFTLVVYIQME----------HGWGSAFGALAIAMGISNMLF 276 (634)
Q Consensus 239 ~lg~~~~p~i~~~l~~~----------~gw~~~f~~~~~~~~i~~~~~ 276 (634)
.+..++|-.++|.+.|- .+|..+|.+-++..++++++.
T Consensus 347 A~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 347 AIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888876541 246666666666655555443
No 231
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.34 E-value=0.0067 Score=66.01 Aligned_cols=169 Identities=11% Similarity=0.014 Sum_probs=104.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----ChhHHHHHHHHHHHHHHHH-HHHHHHHhhhccchhHHHHH
Q 006710 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHK-----SFADSSNAVNNFLGISQAS-SVLGGFLADAYLGRYWTIAI 141 (634)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~-----s~~~~~~~~~~~~~~~~~~-~l~~G~lsDr~~GRr~~i~~ 141 (634)
++.++...+.-|+.-+.|+.+.+ +.+.+.. +.+...++-+...+.+.+. .++.+++++|+ +|++.+.+
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~ 79 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHH
Confidence 45567777777777777766554 4555555 3356667666665655555 88899999998 99999888
Q ss_pred HHHHHHHHHHHHHHhhhhc--ccCCCCCcccccccccCCCCCccch------hHHHHHHHHHHHHHhhhchhh-hHHHHh
Q 006710 142 FTTIYLAGLTGITLCATMK--VFMPNQDNCDRISQLLGSCEPAKSW------QMLYLYTVLYITGFGAAGIRP-CVSSFG 212 (634)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~g~g~g~~~~-~~~~~~ 212 (634)
....+.....++++..... .++|+ +.|++-. .-.+++-. +.|...+.-+...+-...... .-.++.
T Consensus 80 ~~~~F~~~f~lF~~vl~p~~~~~~p~-~~~~~~~----~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fa 154 (472)
T TIGR00769 80 VISPFLGFFALFAFVIYPLSDLLHPT-ALADKLL----SLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFA 154 (472)
T ss_pred HHHHHHHHHHHHHHHHhcchhhcCCc-HHHHHHH----hhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877777766666542210 11111 1111100 00000000 011111111223333333444 677899
Q ss_pred hccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 006710 213 ADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ 253 (634)
Q Consensus 213 ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~ 253 (634)
.|.+..++ -.|.+++++.+.|+|..+++.+..++.
T Consensus 155 ndi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 155 NQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 889999999999999999999888876
No 232
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.34 E-value=8e-06 Score=90.14 Aligned_cols=109 Identities=11% Similarity=0.041 Sum_probs=84.1
Q ss_pred chhHHHHHHHHHHHHHHHhh-hhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcc
Q 006710 422 VFPGLSIFLILSLYYSTFVP-LCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDL 500 (634)
Q Consensus 422 ~~~~~~~~l~~~~~~~~~~~-l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (634)
........+..++.+++.|| ++||+ .+.+|.++.+++.+.+++...
T Consensus 57 ~~~~~~~~~~~~~~G~laDr~~G~r~-----------~~~~g~~~~~~g~~~~~~~~~---------------------- 103 (489)
T PRK10207 57 GAFAALVYGLISIGGYVGDHLLGTKR-----------TIVLGAIVLAIGYFMTGMSLL---------------------- 103 (489)
T ss_pred HHHHHHHHHHHhhHHHhhhhccchHH-----------HHHHHHHHHHHHHHHHHHhcc----------------------
Confidence 33444555667788999998 78874 378888888888777664321
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh--hHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Q 006710 501 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDA--MKSIGSAYAALAGGLGCFAASILNSIIKS 563 (634)
Q Consensus 501 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~--~rg~~~g~~~~~~~ig~~lg~~l~~~v~~ 563 (634)
....+....++.++|.++..|...+++.+++|++ .|+.+.+++++..++|..+|+.+.+.+.+
T Consensus 104 ~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~ 168 (489)
T PRK10207 104 KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD 168 (489)
T ss_pred chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222335667789999999999999999999887 45778999999999999999999998866
No 233
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.29 E-value=4.1e-05 Score=84.86 Aligned_cols=174 Identities=14% Similarity=0.105 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HhCCChh------HHHHHHHHHHHHHHHHHHHH----HHHhhhccchhHHHHHHHHH
Q 006710 78 EMAERMAYFGLSVNMVTFMFY--VMHKSFA------DSSNAVNNFLGISQASSVLG----GFLADAYLGRYWTIAIFTTI 145 (634)
Q Consensus 78 ~~~~~~~~~~~~~~l~~yl~~--~~~~s~~------~~~~~~~~~~~~~~~~~l~~----G~lsDr~~GRr~~i~~~~~~ 145 (634)
.++....++.+...++.++.. ..+.+.. ..++..+.-.+...++.++. +++.||+ +..+.+.++.++
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l 359 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHH
Confidence 335556666666666666543 1112211 13444444454445555555 6666665 777888999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
..++.+.+.+......- + ...+.+++++..+++|+|.+...|...+++.+..|++.
T Consensus 360 ~~l~f~~l~~~~~~~~~------~-------------~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~----- 415 (500)
T PRK09584 360 CSGAFLVLPLGAKFAND------A-------------GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL----- 415 (500)
T ss_pred HHHHHHHHHHHHHhcCC------C-------------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH-----
Confidence 99888887765321100 0 01345678888999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhh----------ccchHHHHHHHHHHHHHHHHHHH
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQM----------EHGWGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~----------~~gw~~~f~~~~~~~~i~~~~~~ 277 (634)
|++.++.+..+..+|+.++..+.+.... ..+..+.|...++..++..++++
T Consensus 416 -rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~ 476 (500)
T PRK09584 416 -MGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLML 476 (500)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888887777666543221 11355666655554443333333
No 234
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.28 E-value=2e-05 Score=86.30 Aligned_cols=135 Identities=16% Similarity=0.119 Sum_probs=91.3
Q ss_pred ccchhHHHHHHHHHHHHHHHhhh-hccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCC
Q 006710 420 MPVFPGLSIFLILSLYYSTFVPL-CRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMP 498 (634)
Q Consensus 420 ~~~~~~~~~~l~~~~~~~~~~~l-~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (634)
+.........+..++.+++.||+ +||+ .+.+|.++.+++.+++....
T Consensus 50 i~~~~~~~~~l~~ligG~LaDRilGrrr-----------~iliG~il~~lg~lll~~~~--------------------- 97 (493)
T PRK15462 50 LFSAYCSLVYVTPILGGFLADKVLGNRM-----------AVMLGALLMAIGHVVLGASE--------------------- 97 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcHH-----------HHHHHHHHHHHHHHHHHHhh---------------------
Confidence 33334455566777889999998 7763 36788888877765544221
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh--hHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCcc
Q 006710 499 DLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDA--MKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWL 576 (634)
Q Consensus 499 ~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~--~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~ 576 (634)
.+...+.....+..+|.++..+...+++.+.+|++ .|+.+.++++...++|+.+++.+.+.+.+.. +|
T Consensus 98 -~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~--------Gw- 167 (493)
T PRK15462 98 -IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY--------SW- 167 (493)
T ss_pred -cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh--------Ch-
Confidence 01122333344555677777777788999999976 7999999999999999999999999876532 24
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHHHHHH
Q 006710 577 AQNINTGRFDYLYWLLAVLSVINFCAFLY 605 (634)
Q Consensus 577 ~~~~~~~~~~~~f~~~a~~~~v~~~~~~~ 605 (634)
++.|.+.++..+++++.+++
T Consensus 168 ---------~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 168 ---------AMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHH
Confidence 55677655555555554443
No 235
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.26 E-value=4.3e-05 Score=80.14 Aligned_cols=165 Identities=12% Similarity=0.058 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc---cchhHHHH-HHHH
Q 006710 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTIA-IFTT 144 (634)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~---~GRr~~i~-~~~~ 144 (634)
+.++.+..+.+...+++..=..+++.|+. .+|.+....+.+-..--+...+.+|+.|..|||. +||||-++ .+.+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 66777777888888888777778888876 6899988888888888888899999999999985 58877555 4455
Q ss_pred HHHHHHHHHHHhhhhcc-cCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcch
Q 006710 145 IYLAGLTGITLCATMKV-FMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY 223 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~ 223 (634)
...++.++...+..+.. +.+. . -++........++++..+.=+..-..+...-++++|+...++
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~----------~--~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~--- 175 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDN----------E--RKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA--- 175 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCC----------c--ccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh---
Confidence 56666666666533221 1111 0 011233566677777778888888888999999999998777
Q ss_pred hhhhhh-HHHHHHHHHHHHHHHHHHHHHHH
Q 006710 224 KTHLDR-FFNFFYLSVTVGAIVAFTLVVYI 252 (634)
Q Consensus 224 ~~~r~~-~~~~~~~~~~lg~~~~p~i~~~l 252 (634)
+.+ +.+++...+.+|..+|..+++|.
T Consensus 176 ---~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 176 ---KKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred ---hhhccchhHHHHHHhcceeeeeccccc
Confidence 333 88899999999999988777654
No 236
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.24 E-value=6.2e-05 Score=77.98 Aligned_cols=155 Identities=13% Similarity=0.067 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
.....+..|+..-+=..+.++++.|+.+..|.+..+++..++.+..+.+++..++-++-.|+ -..|++.+.+++..+-.
T Consensus 238 ~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~ 316 (422)
T COG0738 238 LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLL 316 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 34444444554444445667899999988999999999999999999999999999988887 88888888876555444
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
+...+. .+ ..-+.+.++.|+..+.++|.+.+...+..|++.+ ++++
T Consensus 317 ~~~~l~----------------------------~g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts-----~~s~ 362 (422)
T COG0738 317 LAVALI----------------------------GG-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTS-----VGSG 362 (422)
T ss_pred HHHHHh----------------------------cC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc-----ccce
Confidence 444443 23 3334456789999999999999999999996552 3332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHHHH
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFG 263 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~ 263 (634)
.-.+..+|+++-|.+.|++.|..|-...+.
T Consensus 363 ---~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 363 ---LLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred ---eeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 222445899999999999999998777666
No 237
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.23 E-value=2.2e-05 Score=84.04 Aligned_cols=157 Identities=14% Similarity=0.037 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
....++..++...++....+..+.|.+..+|.+.....+.......+..++.++...+++|+ |+|+++.++.++.+++.
T Consensus 238 ~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~~ 316 (467)
T COG2211 238 LLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVGY 316 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHHH
Confidence 44555566666666666666667777778888888888888888888888899999999998 99999999999999999
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh-hhh
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH-LDR 229 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~-r~~ 229 (634)
+++.+.. . .+..++++..++.++|.+...+...++++|..+-++-+.-+. -|.
T Consensus 317 ~~~~f~~-------~-------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi 370 (467)
T COG2211 317 LLLYFTP-------A-------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGI 370 (467)
T ss_pred HHHHhhc-------C-------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhh
Confidence 8888862 1 567888888899999999999999999999887443221111 233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQM 254 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~ 254 (634)
.++...+..=+|.+++..+.|++..
T Consensus 371 ~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 371 VYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555556666666666665543
No 238
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.20 E-value=0.0002 Score=76.85 Aligned_cols=109 Identities=13% Similarity=0.099 Sum_probs=90.0
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCC
Q 006710 418 TCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAM 497 (634)
Q Consensus 418 ~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (634)
+.+.........+...+.+++.||++-|. .+.++++..++..++.++..
T Consensus 65 G~I~s~F~ysYal~qIp~GlLaDrlG~K~-----------vL~l~~l~Wsl~t~L~~fa~-------------------- 113 (511)
T TIGR00806 65 NEIIPVLPYSHLAVLVPVFLLTDYLRYKP-----------VLVLQALSFVCVWLLLLLGT-------------------- 113 (511)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCchH-----------HHHHHHHHHHHHHHHHHHHH--------------------
Confidence 33444455566777888889999888773 37777777777777766653
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHh
Q 006710 498 PDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSII 561 (634)
Q Consensus 498 ~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v 561 (634)
+...+.+.-+++|++|+... ....++++.+|++.|++++|+++....+|.++++.+.+.+
T Consensus 114 ---Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 114 ---SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred ---HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57788888899999999999 9999999999999999999999999999999999999984
No 239
>PTZ00207 hypothetical protein; Provisional
Probab=98.18 E-value=9.2e-05 Score=82.56 Aligned_cols=131 Identities=14% Similarity=0.071 Sum_probs=93.5
Q ss_pred HHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHH
Q 006710 430 LILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQY 509 (634)
Q Consensus 430 l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~ 509 (634)
++.++.+++.|++++|. .+.+|.++..++.++.++.... ... .+.+.+.+..
T Consensus 76 ~~~lp~G~L~Dr~G~R~-----------vllig~ll~~iG~ll~ala~~~----------------~i~-~s~~~l~l~r 127 (591)
T PTZ00207 76 YFLLPYSFIYDYLGPRP-----------IFVLSMTVFCLGTLLFALTFQE----------------VIE-GSVVRLSVYN 127 (591)
T ss_pred HHHHHHHHHHHHhCcHH-----------HHHHHHHHHHHHHHHHHHHhcc----------------ccc-CcHHHHHHHH
Confidence 34456788999988884 3788888888888877764211 001 2567777778
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHH
Q 006710 510 CLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLY 589 (634)
Q Consensus 510 ~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f 589 (634)
++.|+|+++..+.....+.+.+| +.||.++|+.....++|+.+.+.+...+.. . +| ..+|
T Consensus 128 ~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~--------~~----------~~~f 187 (591)
T PTZ00207 128 GLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-D--------NT----------SAYF 187 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--------hH----------HHHH
Confidence 89999999999999999999987 679999999999999999865544443322 0 12 3556
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 006710 590 WLLAVLSVINFCAFLYSAY 608 (634)
Q Consensus 590 ~~~a~~~~v~~~~~~~~~~ 608 (634)
++++++.++..++.+.+.+
T Consensus 188 l~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 188 FFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHHHHHHhhee
Confidence 7677776666666555544
No 240
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.15 E-value=0.00014 Score=80.70 Aligned_cols=139 Identities=12% Similarity=0.198 Sum_probs=100.8
Q ss_pred CccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCC
Q 006710 417 VTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTA 496 (634)
Q Consensus 417 ~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (634)
..++...+.+...+..|+.+++.|.++||.. +.+|.++..+|+++.+...
T Consensus 80 ~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~-----------~i~g~~l~vvG~Iv~atA~------------------- 129 (599)
T PF06609_consen 80 WSWFSTAWTLASAVSFPFVGRLSDLFGRRYF-----------FIIGSLLGVVGSIVCATAQ------------------- 129 (599)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHHhcchHH-----------HHHHHHHHHhHHHHhhcCC-------------------
Confidence 4566777888888899999999999999943 7888888888888766432
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCcc
Q 006710 497 MPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWL 576 (634)
Q Consensus 497 ~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~ 576 (634)
+...++....+.|+|.+.... ....+.|..|.+.|..+.++.....-+....++.+...+.. ..+|
T Consensus 130 ----~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~--------~~~W- 195 (599)
T PF06609_consen 130 ----NMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA--------HSGW- 195 (599)
T ss_pred ----cHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc--------CCCc-
Confidence 456677788888888776654 35558999999999998887776555555566666554432 1346
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 006710 577 AQNINTGRFDYLYWLLAVLSVINFCAFLYSAY 608 (634)
Q Consensus 577 ~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~ 608 (634)
.|.|++.+.+..++++..+++++
T Consensus 196 ---------Rw~~~~~~i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 196 ---------RWIFYIFIIWSGIALVLIFFFYF 218 (599)
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHhC
Confidence 56777777777777666665554
No 241
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.14 E-value=1.4e-05 Score=85.27 Aligned_cols=172 Identities=8% Similarity=-0.090 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 006710 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (634)
Q Consensus 76 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~ 155 (634)
+..++..++.-.+.+++--++ ++.+-.+..-|.....-..+-++.-++.++|-.++ |+-+++.+++..+++=.+....
T Consensus 378 ~~av~mG~g~~lv~tFLfWHl-ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~ 455 (618)
T KOG3762|consen 378 FVAVVMGAGVGLVFTFLFWHL-EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSY 455 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHH
Confidence 334444444444555554444 45565555566566666677778888999999998 9999999999888876666655
Q ss_pred hhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHH
Q 006710 156 CATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY 235 (634)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 235 (634)
. +|.|+.+..-+++|+..+.++.++.+|+.+..|++- |.++-++..
T Consensus 456 L----------------------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~ 501 (618)
T KOG3762|consen 456 L----------------------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQ 501 (618)
T ss_pred h----------------------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHH
Confidence 4 688999999999999999999999999999999999 899988865
Q ss_pred H-HHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhcccc
Q 006710 236 L-SVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLY 283 (634)
Q Consensus 236 ~-~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~ 283 (634)
. .-.+|-.+|.+++|.+.+.+|-+..|.+.++.+++.++.+....+..
T Consensus 502 g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~l 550 (618)
T KOG3762|consen 502 GIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLLL 550 (618)
T ss_pred HHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 5 56889999999999999999999999998888877777766554443
No 242
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.10 E-value=0.0002 Score=69.81 Aligned_cols=152 Identities=17% Similarity=0.114 Sum_probs=90.2
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCccccc
Q 006710 93 VTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRI 172 (634)
Q Consensus 93 ~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (634)
..|+-+.+++...+.+.+.-.-.....++..+.|-|+|+- |||+.-+..++. .+++.+.-.
T Consensus 60 vYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycit----YiLsCiTKh-------------- 120 (454)
T KOG4332|consen 60 VYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCIT----YILSCITKH-------------- 120 (454)
T ss_pred eeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHH----HHHHHHhhc--------------
Confidence 4567778889888888877777777788888999999997 999986555544 444444311
Q ss_pred ccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHH-hhccCCCCCcchhhhhhhHHHH-HHHHHHHHHHHHHHHHH
Q 006710 173 SQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSF-GADQFDERSKDYKTHLDRFFNF-FYLSVTVGAIVAFTLVV 250 (634)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~-~ad~~~~~~~~~~~~r~~~~~~-~~~~~~lg~~~~p~i~~ 250 (634)
.++.-.++++|++-|+..+.......+. ++|.-.++.=+ ++=...-++- ..++..+-+.++.+.+.
T Consensus 121 -----------SpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Fe-qqWls~TFskA~ffgNglvAiiaGlfgn 188 (454)
T KOG4332|consen 121 -----------SPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFE-QQWLSVTFSKAVFFGNGLVAIIAGLFGN 188 (454)
T ss_pred -----------CCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCCh-HhhhhHHHHHHHHhhccHHHHHHHHHHH
Confidence 0456788999999999998877666554 46655333211 0001111111 11122233344444445
Q ss_pred HHhhccc--hHHHHHHHHHHHHHHHHH
Q 006710 251 YIQMEHG--WGSAFGALAIAMGISNML 275 (634)
Q Consensus 251 ~l~~~~g--w~~~f~~~~~~~~i~~~~ 275 (634)
.+.+..+ -..+|-.++....++..+
T Consensus 189 ~lvd~~slGPVAPFdAAacfLaigmAv 215 (454)
T KOG4332|consen 189 LLVDTFSLGPVAPFDAAACFLAIGMAV 215 (454)
T ss_pred HHHHHhccCCCCchHHHHHHHHHHHHH
Confidence 5555543 445565554444444433
No 243
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.06 E-value=0.00036 Score=76.14 Aligned_cols=208 Identities=14% Similarity=-0.012 Sum_probs=142.2
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCChh------H----HHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 62 LSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFA------D----SSNAVNNFLGISQASSVLGGFLAD 130 (634)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~------~----~~~~~~~~~~~~~~~~l~~G~lsD 130 (634)
+..++-++.++.++..+++..++++.+..+...|+.+ .+|-++. + ..+....+.+...+..++--++.+
T Consensus 251 ~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~ 330 (477)
T TIGR01301 251 GAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCR 330 (477)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457778899999999999999999999998999875 4543221 1 234445555555566667777888
Q ss_pred hccc-hhHHHHHHHHHHHHHHHHHHHhhhhccc-CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhH
Q 006710 131 AYLG-RYWTIAIFTTIYLAGLTGITLCATMKVF-MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCV 208 (634)
Q Consensus 131 r~~G-Rr~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~ 208 (634)
|+ | ||++..++.++..+++....+....+.. .+ .++ ++ . --.+.....+..++...+.|+..+.....-
T Consensus 331 ~~-g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~----~~~-~~--~-~~~~~~~~~~~~l~~~~~~Gi~~A~~~siP 401 (477)
T TIGR01301 331 GW-GAGKRLWGIVNIILAICLAATVLVTYVAKNSRY----YDG-DG--E-SLPPPTGIKASALIVFAILGIPLAITYSIP 401 (477)
T ss_pred Hh-ccchhHHHHHHHHHHHHHHHHHHHHhhhhcccc----ccc-cc--c-ccCcchhhHHHHHHHHHHhhHHHHHHHHHh
Confidence 87 8 5777789988888887777654321100 00 000 00 0 000011123556666678999999999999
Q ss_pred HHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc--hHHHHHHHHHHHHHHHHHHHHhccc
Q 006710 209 SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG--WGSAFGALAIAMGISNMLFFIGTPL 282 (634)
Q Consensus 209 ~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~g--w~~~f~~~~~~~~i~~~~~~~~~~~ 282 (634)
.+++++..+++..+ .|..+++++.++.+...+..+..|.+.+..| -.+.+.+.++.++++.+..+...|+
T Consensus 402 fal~s~~~~~~~~~----~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 402 FALASIRSSNLGAG----QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred HHHHHHHccccCCC----CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999865421 6999999999999999999888777655444 4567778888877777766665554
No 244
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.05 E-value=2.9e-05 Score=84.78 Aligned_cols=163 Identities=13% Similarity=0.118 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc---cchhHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTIAIFTTIYL 147 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~---~GRr~~i~~~~~~~~ 147 (634)
+|...+..++.....|++..++|.|+++..|+|..+++.....+.++..++.+++|+++||. ..+|..+...+.++.
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~ 354 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYA 354 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 78888889999999999999999999986779999999999999999999999999999993 266666666655544
Q ss_pred H-HHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 148 A-GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 148 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
+ |.+.+... .+......+.+....+.+...++......+....+.+
T Consensus 355 ~~g~~~l~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k----- 401 (495)
T KOG2533|consen 355 IIGAISLLAA----------------------------AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTK----- 401 (495)
T ss_pred HHHHHHHHhh----------------------------ccchHHhHHHHhcchhhHHHHHHHHhhccccccchHH-----
Confidence 3 32333322 1122222222333344444455555556666655441
Q ss_pred hhhHHHHHHHHHHHHHHH-HHHHHHHHhhccchHHHHHHHH
Q 006710 227 LDRFFNFFYLSVTVGAIV-AFTLVVYIQMEHGWGSAFGALA 266 (634)
Q Consensus 227 r~~~~~~~~~~~~lg~~~-~p~i~~~l~~~~gw~~~f~~~~ 266 (634)
|-+..+.+..+.+.++.+ +++..+.....++|...|+...
T Consensus 402 ~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~ 442 (495)
T KOG2533|consen 402 ALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLV 442 (495)
T ss_pred hHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHH
Confidence 555555555554444444 4444455555678888885433
No 245
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.01 E-value=3.3e-05 Score=84.85 Aligned_cols=136 Identities=10% Similarity=-0.152 Sum_probs=106.7
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCccccccccc
Q 006710 97 FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLL 176 (634)
Q Consensus 97 ~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (634)
.+.+|+++.+.|.+.....++..++..+.+.+.+|+ +.|+++.++.++..++.....+....+..... .
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~g---i------- 348 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLAFG---I------- 348 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccccC---C-------
Confidence 457899999999999999999999999999999987 99999999998888776554321100000000 0
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 006710 177 GSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (634)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~ 256 (634)
.+...+...-++.+++.+........++.+..|++. +++.++++....++|..+++.+++++.+..
T Consensus 349 --------~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 349 --------SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred --------CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 112234444578888888888888999999999999 999999999999999999999999998876
Q ss_pred c
Q 006710 257 G 257 (634)
Q Consensus 257 g 257 (634)
|
T Consensus 415 g 415 (468)
T TIGR00788 415 G 415 (468)
T ss_pred C
Confidence 6
No 246
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.00 E-value=3.6e-08 Score=107.76 Aligned_cols=188 Identities=14% Similarity=0.089 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.....+....+..+..+....+...++.+..+.+.. -.......+...++.+++.++.||+ |||++++++..+..+.
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 344444444444444433444445555566677666 2222333455556777888999998 9999999998887776
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
.+.+..... ..+. .+...+...+....+.......+..+....+.+|.||++. |.+
T Consensus 330 ~~~~~~~~~---~~~~---------------~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~ 385 (451)
T PF00083_consen 330 SLILGIIFF---LGVS---------------SSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RST 385 (451)
T ss_pred ccccccccc---cccc---------------cccccccccceeeeeccccccccccccccccccccccccc------ccc
Confidence 665541000 0000 0000122222211111112222344666688899999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhccccc
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYR 284 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~ 284 (634)
+.++.+....+++.++|.+..++.+..+-...|++.+++.++..+..++..|+.+
T Consensus 386 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~ 440 (451)
T PF00083_consen 386 GIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETK 440 (451)
T ss_pred ccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCC
Confidence 9999888888999999888877777666334555555555555555555455443
No 247
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.91 E-value=9.7e-05 Score=59.08 Aligned_cols=69 Identities=17% Similarity=-0.026 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 006710 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (634)
Q Consensus 75 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~ 145 (634)
-...++...+...+.++++.|+.+ .|+|..+.+.+.++..+...++++++|+++||+ ||++.++....+
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 344455556666677889999884 899999999999999999999999999999998 988877766554
No 248
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.90 E-value=0.00029 Score=78.53 Aligned_cols=196 Identities=13% Similarity=0.047 Sum_probs=106.3
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~ 144 (634)
+..++......+..++..++.+....+....+-+..|.+... .+...+......++..++.++-||+ |||+.++.+.+
T Consensus 290 ~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~ 367 (513)
T KOG0254|consen 290 PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAA 367 (513)
T ss_pred cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHH
Confidence 344555555555555555444333333344445556665443 4555556666677778889999998 99999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchh
Q 006710 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (634)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 224 (634)
.+.++.++++........... + ........+....+.......+..|....+.+|.+|.+.
T Consensus 368 ~m~~~~~~~~~~~~~~~~~~~---~------------~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~---- 428 (513)
T KOG0254|consen 368 GMSICLVILAVVGVFALYYPN---S------------SKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL---- 428 (513)
T ss_pred HHHHHHHHHHHHHHHhccCCC---c------------ccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH----
Confidence 999999988876432111000 0 000112222222223333333445566678899999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHH-HHHHhcccc
Q 006710 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM-LFFIGTPLY 283 (634)
Q Consensus 225 ~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~-~~~~~~~~~ 283 (634)
|+.+.++-.....+...+-...--.+.+..++...|.+......+..+ ..+...++.
T Consensus 429 --r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pET 486 (513)
T KOG0254|consen 429 --RSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPET 486 (513)
T ss_pred --HhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccC
Confidence 888888844433333322222222222332234455554444444444 334444443
No 249
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.89 E-value=1e-05 Score=84.62 Aligned_cols=182 Identities=15% Similarity=0.044 Sum_probs=124.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH--------HHHHHHHHHH-HHHHHHHHHhhhccchhH
Q 006710 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSN--------AVNNFLGISQ-ASSVLGGFLADAYLGRYW 137 (634)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~--------~~~~~~~~~~-~~~l~~G~lsDr~~GRr~ 137 (634)
|-+..+-.++.-|+.-+++|+...+... +.+.+++.+.+... ...+...... .+..++..+.|++ |||+
T Consensus 302 hg~~Llgt~~~WFllDiafy~~nL~~s~-I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~ 379 (538)
T KOG0252|consen 302 HGKHLLGTAGTWFLLDIAFYGQNLFQSV-IFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKY 379 (538)
T ss_pred HHHHHHHHHHHHHhhhhhhhccccHHHH-HHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHH
Confidence 4466777888888888999988766443 34445554443322 1122222222 2556677789998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHH-HHHHHhhhchhhhHHHHhhccC
Q 006710 138 TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVL-YITGFGAAGIRPCVSSFGADQF 216 (634)
Q Consensus 138 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~ad~~ 216 (634)
.-+.+.+++++....++.... +. .+..-+++.- +.+-++.-+..+....+-+|.|
T Consensus 380 iq~~GF~~~~i~~~~~~~~y~--~~----------------------~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~F 435 (538)
T KOG0252|consen 380 IQLMGFFIMTIFFFVIAGPYN--QL----------------------ENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIF 435 (538)
T ss_pred HHHhhHHHHHHHHHHHcCCcc--cc----------------------cccCceeehHHHHHHHHhcCCCceeEEeehhhc
Confidence 999999988877666665311 00 1111122211 2333444455566666779999
Q ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-----ccchHHHHHHHHHHHHHHHHHHHHhc
Q 006710 217 DERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-----EHGWGSAFGALAIAMGISNMLFFIGT 280 (634)
Q Consensus 217 ~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~-----~~gw~~~f~~~~~~~~i~~~~~~~~~ 280 (634)
|++. |+.+-++...+.-+|+.+|...-.++++ ..+.++.|++.+.++.++.+..++..
T Consensus 436 Parv------R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 436 PARV------RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred hHHH------hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEee
Confidence 9999 9999999999999999999999999998 77889999999988888877665544
No 250
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.88 E-value=0.00011 Score=83.58 Aligned_cols=136 Identities=15% Similarity=0.044 Sum_probs=95.3
Q ss_pred CccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH--HHhhh-------h--
Q 006710 417 VTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERY--RRNYA-------I-- 485 (634)
Q Consensus 417 ~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~--~~~~~-------~-- 485 (634)
.+++.....+...+..++.+++.||..||.. +++|+++++++.++.++..-. +.... .
T Consensus 70 ~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~-----------i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 70 SGLINGSYEIGNLLLIIFVSYFGTKLHRPIV-----------IGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred ceeeeehhhHHHHHHHHHHHHhhcccCcceE-----------EEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 4566667777778888888888888777643 788888888888777654210 00000 0
Q ss_pred ---hcCcccc--------------ccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhH
Q 006710 486 ---SHGYEFS--------------FLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGG 548 (634)
Q Consensus 486 ---~~~~~~~--------------~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ 548 (634)
..-+..+ .........+..+++.-++.|+|++...+...+++.+.+|++.|+.+.|+++....
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 0000000 00000001244566778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhc
Q 006710 549 LGCFAASILNSIIKS 563 (634)
Q Consensus 549 ig~~lg~~l~~~v~~ 563 (634)
+|..+|+.+.+.+.+
T Consensus 219 iG~~lG~llgg~l~~ 233 (633)
T TIGR00805 219 FGPAFGYLLGSFCLQ 233 (633)
T ss_pred hhhHHHHHHHHHHHh
Confidence 999999999988765
No 251
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.87 E-value=0.056 Score=57.33 Aligned_cols=61 Identities=16% Similarity=0.221 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHh
Q 006710 501 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSII 561 (634)
Q Consensus 501 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v 561 (634)
+.|.+++..+..|+-.+..+......+.+..|++.|..++|+....-.+|-.++.++.-.+
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4555555666778888888888888999999999999999999999999988888776544
No 252
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.65 E-value=0.0023 Score=58.69 Aligned_cols=110 Identities=15% Similarity=0.194 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccc
Q 006710 105 ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKS 184 (634)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (634)
.......++......+..++...+-+++ |.|++++++.+.+.+-......
T Consensus 37 ~~G~~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~----------------------------- 86 (156)
T PF05978_consen 37 GLGYYSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY----------------------------- 86 (156)
T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh-----------------------------
Confidence 3334445555566677778888889987 9999999999988765444332
Q ss_pred hhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 006710 185 WQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (634)
Q Consensus 185 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~ 250 (634)
.+.+.++.+-.+.|++.+..+.....++.+..++++ |++..+++....+.+..+|.++.-
T Consensus 87 ~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 87 PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888899999999999999999999888877 777777766666666666655443
No 253
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.51 E-value=0.0019 Score=66.61 Aligned_cols=152 Identities=14% Similarity=0.072 Sum_probs=116.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc-hhHHHHHHHHHH
Q 006710 69 IAALFIFGNEMAERMAYFGLSVNMVTFM-FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG-RYWTIAIFTTIY 146 (634)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~G-Rr~~i~~~~~~~ 146 (634)
.+.+.++....+.+...|....+...++ .+.+|+++.|.|-+.+.-.+.+.+.++.-+...||..| -+-.+..++.+.
T Consensus 260 i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~ 339 (451)
T KOG2615|consen 260 ISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLI 339 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHH
Confidence 4556666655555555566666666666 46799999999999998888888888888889998744 344444444444
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhh
Q 006710 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (634)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 226 (634)
.-..++...+ .....++++..+-.+..+...++...++....|+++
T Consensus 340 vP~~llls~~----------------------------~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------ 385 (451)
T KOG2615|consen 340 VPAFLLLSLA----------------------------RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------ 385 (451)
T ss_pred HHHHHHHhcc----------------------------ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------
Confidence 4344444443 345778888889999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (634)
Q Consensus 227 r~~~~~~~~~~~~lg~~~~p~i~~~l~~ 254 (634)
||...|+......++-++||+++|.+..
T Consensus 386 rG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 386 RGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred chHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 9999999999999999999999987754
No 254
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.41 E-value=0.027 Score=64.08 Aligned_cols=324 Identities=11% Similarity=-0.038 Sum_probs=196.7
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccc
Q 006710 94 TFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRIS 173 (634)
Q Consensus 94 ~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (634)
.+..--.+...........++....++..++....+|-.-|+-..+..-....++..+...+.+... . +
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a-~-~--------- 77 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGA-I-P--------- 77 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc-C-c---------
Confidence 3333334445556778889999999999999999999886777788888887777777776653310 0 1
Q ss_pred cccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 006710 174 QLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ 253 (634)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~ 253 (634)
.........+..+.+.++.++..++-+.+.+++++..++ ..+.+..++|++..+.+.+ |.+++..+.
T Consensus 78 ---------~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~---~~~~~~~s~F~~fY~~iNi-GSlis~~i~ 144 (654)
T TIGR00926 78 ---------SSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE---RQLSLRSRFFSFFYFAINA-GSLISTIIT 144 (654)
T ss_pred ---------ccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc---cchhHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 012334455677778899999999999999999987652 4455788999999887765 556666666
Q ss_pred hccc-hHH------HHH-HHHHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCC
Q 006710 254 MEHG-WGS------AFG-ALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGK 325 (634)
Q Consensus 254 ~~~g-w~~------~f~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~ 325 (634)
.... +.. .|. ..++.+++.++.+......++..++.+.....+.++...+...++
T Consensus 145 ~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~----------------- 207 (654)
T TIGR00926 145 PILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALR----------------- 207 (654)
T ss_pred HHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHH-----------------
Confidence 5433 221 133 344445555555555544444333332221122222211111100
Q ss_pred ccccCCCcccccCCcchHHHHHHhhhccccCCCCCCcccc--chhhhHHHHHHhHhhHHHHHHHHHHHHHhhhhHHHHHH
Q 006710 326 HSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCT--VTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQA 403 (634)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 403 (634)
.............|.+.. ...+++.+...+++.++...+.+++.+.++......+.
T Consensus 208 ----------------------~~~~~~~~~~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~ 265 (654)
T TIGR00926 208 ----------------------KRFSTRSEHWPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWT 265 (654)
T ss_pred ----------------------HhhccCCcccchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 000000000011222211 11234567777788887777777877777666666666
Q ss_pred hhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006710 404 YTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGA-SQLQRVGIGLAVSILSVIWAGIFERYRRN 482 (634)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~-~~~~~i~~G~~l~~~~~~~~~~~~~~~~~ 482 (634)
..++...+.+.........++.+-.++..++...+..++.++.. | . .++.++.-+.+.+.++.+.+...+....+
T Consensus 266 ~qa~~m~~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~-~---~~~~ls~l~k~~iG~~la~la~~va~~ve~~ 341 (654)
T TIGR00926 266 LQATRMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIA-K---CGTRFTSLRKMAVGGLLAALSFFVAALVQLK 341 (654)
T ss_pred HHHHHhcCccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHH-h---cCCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67776644333333345667777777777777776667887752 1 3 45667888888888888888877766665
Q ss_pred hh
Q 006710 483 YA 484 (634)
Q Consensus 483 ~~ 484 (634)
.-
T Consensus 342 ~~ 343 (654)
T TIGR00926 342 VN 343 (654)
T ss_pred Hh
Confidence 55
No 255
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.38 E-value=0.11 Score=53.71 Aligned_cols=158 Identities=14% Similarity=0.118 Sum_probs=89.1
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhh-----hccchhHH
Q 006710 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLAD-----AYLGRYWT 138 (634)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsD-----r~~GRr~~ 138 (634)
.++..+.+..+++..+...+-. |....+|. +-+.-|.|-++.+....+| .=+-.-+++.++-| |+ ||||.
T Consensus 26 ~~~d~~~illLl~LYllQGiP~-GL~~~iP~-lL~ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~~-Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIPL-GLIGAIPL-LLQAKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKRF-GRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCch-hHhhhhHH-HhcCCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHhh-ccccc
Confidence 4556667888888888877666 66665454 4445677766554332222 22334578888999 87 99997
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCC
Q 006710 139 IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (634)
Q Consensus 139 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~ 218 (634)
-++-+- +.+|.++..++......... + ...++...+....++.-+..+.---++-...-.+..+
T Consensus 101 Wvvp~q-~llG~~mllLs~~v~~~~g~-----n----------g~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~ 164 (510)
T KOG3574|consen 101 WVVPCQ-YLLGLFMLLLSYLVDRGLGG-----N----------GGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSR 164 (510)
T ss_pred eeeehH-HHHHHHHHHHhhCCCccccc-----C----------CCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCH
Confidence 665443 34566666665332111110 0 0012333333344455555555444555555566666
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 006710 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTL 248 (634)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i 248 (634)
++ .+-+-.-...+.+.|.+++..+
T Consensus 165 e~------lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 165 EN------LGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred hh------cCchhHHHHHHHhhhHHhhcce
Confidence 66 5666555666777777776644
No 256
>PRK03612 spermidine synthase; Provisional
Probab=97.15 E-value=0.069 Score=59.33 Aligned_cols=177 Identities=14% Similarity=0.072 Sum_probs=96.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHH-HHHHH
Q 006710 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA-IFTTI 145 (634)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~-~~~~~ 145 (634)
+.+.+..+.+..-+..+++-.+ ..-.+...+|-+....+.++++|.++..+|..++|+++++. -|+...+ +...+
T Consensus 15 ~~~~l~~~~f~sg~~~L~yEv~---~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l 90 (521)
T PRK03612 15 DRALLLAAVFVCAACGLVYELL---LGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLAL 90 (521)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHH
Confidence 3333444444443444444333 34455556788899999999999999999999999887553 2322211 11111
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhh
Q 006710 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (634)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 225 (634)
......++..... +.. . .....++...++.++..|+..|....+..+... ++
T Consensus 91 ~~~~~~~ll~~~~-~~~-~--------------------~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~----- 142 (521)
T PRK03612 91 LGGLSALILYAAF-AFQ-G--------------------LSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH----- 142 (521)
T ss_pred HHHHHHHHHHHHH-HHH-H--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc-----
Confidence 1111111111100 000 0 111222333456677777777777766654322 12
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhh-ccch-HHHHHHHHHHHHHHHHHH
Q 006710 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQM-EHGW-GSAFGALAIAMGISNMLF 276 (634)
Q Consensus 226 ~r~~~~~~~~~~~~lg~~~~p~i~~~l~~-~~gw-~~~f~~~~~~~~i~~~~~ 276 (634)
-++..+..|....+|+.+|.++.+++.- ..|- ...+.+..+..+++++.+
T Consensus 143 -~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~ 194 (521)
T PRK03612 143 -LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFL 194 (521)
T ss_pred -hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 3455677788888999999998887654 5663 444444444444444333
No 257
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.12 E-value=0.00011 Score=81.69 Aligned_cols=180 Identities=11% Similarity=0.068 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLG-ISQASSVLGGFLADAY-LGRYWTIAIFTTIYLA 148 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~l~~G~lsDr~-~GRr~~i~~~~~~~~~ 148 (634)
+....+....+.+...++.+++|.|+..+|+.++++++.+.+...+ +.+++.+++|++..|+ ++.|+++.+..+..++
T Consensus 307 f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v 386 (539)
T PF03137_consen 307 FMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIV 386 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHH
Confidence 5667777788888888999999999999999999999999987765 6678999999999987 3455555555555444
Q ss_pred HHHHHHHhhh-----hc--cc-CCC------------CCccccc------ccccCCCCCccchhHHHHHHHHHHHHHhhh
Q 006710 149 GLTGITLCAT-----MK--VF-MPN------------QDNCDRI------SQLLGSCEPAKSWQMLYLYTVLYITGFGAA 202 (634)
Q Consensus 149 ~~~~~~~~~~-----~~--~~-~~~------------~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g 202 (634)
..+....... .+ -+ .+- ...|+.. +.+.+.|+.+-..++..+++..++..+..+
T Consensus 387 ~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~ 466 (539)
T PF03137_consen 387 SVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTF 466 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHH
Confidence 4433111000 00 00 000 0012110 113345766633455566666555555555
Q ss_pred chhhhHHHHhhccCCCCCcchhhhhhhHHHHHHH-HHHHHHHHHHHHHHHHhhcc
Q 006710 203 GIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL-SVTVGAIVAFTLVVYIQMEH 256 (634)
Q Consensus 203 ~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~-~~~lg~~~~p~i~~~l~~~~ 256 (634)
..........-...++++ |..+.++... .-.+|..-||++-|++.|..
T Consensus 467 ~~~~p~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 467 MSQVPSTLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp -------------------------------------------------------
T ss_pred hcccchheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 555555556668889998 9999999554 56778889999999888753
No 258
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.06 E-value=0.0095 Score=59.17 Aligned_cols=104 Identities=13% Similarity=0.015 Sum_probs=74.5
Q ss_pred HHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHH
Q 006710 431 ILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYC 510 (634)
Q Consensus 431 ~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~ 510 (634)
++.+.+.+.|+++.+. .+.+|.++..+|..+....-.++ .++.+.|.+.....
T Consensus 52 ~G~~~G~l~d~~gp~~-----------~l~iG~~~~~~GY~~~~l~~~~~----------------i~~~~~~~~~~~~~ 104 (250)
T PF06813_consen 52 FGILAGLLYDRFGPWV-----------VLLIGAVLGFVGYGLLWLAVSGR----------------IPSLPVWLMCLFLF 104 (250)
T ss_pred ccHHHHHHHHhcchHH-----------HHHHHHHHHHHHHHHHHHHHhCc----------------cCccchHHHHHHHH
Confidence 3566677878776653 37888888888887766544221 11135555555556
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhh
Q 006710 511 LIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIK 562 (634)
Q Consensus 511 l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~ 562 (634)
+.+.+..+.......-..+.+| +.||.+.|+.....++++.+-+.+...+.
T Consensus 105 l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 105 LGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred HHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 6667777777888888889998 57999999999999999888887776554
No 259
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.95 E-value=0.048 Score=60.81 Aligned_cols=145 Identities=11% Similarity=0.083 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
..+.+.+..+...+.+|+.. +....+|.+.......... .........+.+-|++ |||.....+.++..++
T Consensus 323 ~~~~~~~~~~~~~~~y~gl~-----~~~~~lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~ 393 (521)
T KOG0255|consen 323 RTLYLLFIWFVFSLVYYGLS-----LNVSGLGGNIYLNFTLSGL---VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIG 393 (521)
T ss_pred HHHHHHHHHHHHhHHHHhhh-----hhhhhcCchHHHHHHHHHH---HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 34444444444445555433 3334455554433333333 3444445558899998 9999999999998888
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
.+..+.... . ...+...+...+..++.+........+.+|++|+.. |..
T Consensus 394 ~~~~~~~~~-----~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~------r~~ 442 (521)
T KOG0255|consen 394 LLLFGWLPD-----D--------------------LGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVV------RNT 442 (521)
T ss_pred HHHHHHhhc-----c--------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHH
Confidence 888777521 0 110123333334444555555666889999999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQM 254 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~~ 254 (634)
+.+.......+|+.++|.+......
T Consensus 443 ~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 443 AVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999987655544
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.92 E-value=0.0094 Score=64.43 Aligned_cols=161 Identities=12% Similarity=0.080 Sum_probs=100.9
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCC
Q 006710 418 TCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAM 497 (634)
Q Consensus 418 ~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (634)
++......+...++.|+++.+..|.. +.++.+.+|.++++++.+++...+..
T Consensus 74 G~viaa~slg~~i~~liF~~Ws~k~~----------~~k~Pli~s~ii~~~g~llY~~l~~~------------------ 125 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIWSNKTG----------SVKKPLIVSFLIAIIGNLLYLALAYV------------------ 125 (488)
T ss_pred hHHHHHHHHHHHhcchhhcccccccC----------CcccCHHHHHHHHHHHHHHHHHHHhc------------------
Confidence 33444466777777777775543322 22455899999999999998666632
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccc
Q 006710 498 PDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLA 577 (634)
Q Consensus 498 ~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~ 577 (634)
+.-..+++.+..++.|+|.+- ....=.|+++..-.+.|.++++..+..+.+|..+|+.+...+..... .+-.|++
T Consensus 126 ~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~----~G~~i~~ 200 (488)
T KOG2325|consen 126 PNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGE----KGFMILP 200 (488)
T ss_pred ccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcC----CceEEcC
Confidence 201567788899999988554 23566777776666777777777777777777777777665544321 0111233
Q ss_pred c-CCccchhhHHHHHHHHHHHHHHHHHHHhhccceec
Q 006710 578 Q-NINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYR 613 (634)
Q Consensus 578 ~-~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~~~ 613 (634)
. .+|. +...=|+.+++.++..++.+++.+|..+.
T Consensus 201 ~~~~n~--YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 201 GLIFNM--YTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred cceEEe--cchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 1 2232 22335667777777777777777665443
No 261
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.86 E-value=0.014 Score=47.34 Aligned_cols=64 Identities=8% Similarity=-0.070 Sum_probs=57.7
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 006710 92 MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (634)
Q Consensus 92 l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~ 156 (634)
+.+.+.++.++|.++++++.+...+++.++.+...++.++. .+++.+..+.++..+.++.+++.
T Consensus 14 lLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 14 LLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 45568889999999999999999999999999999999986 88899999999988888888875
No 262
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.79 E-value=0.0076 Score=65.59 Aligned_cols=127 Identities=11% Similarity=0.057 Sum_probs=107.5
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHH-HhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcc
Q 006710 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGF-LADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (634)
Q Consensus 91 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~-lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (634)
.+..|+...++++..+.+...+.......++.++... +.-. +|-|+++..|++...+.....+++
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~------------- 328 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFA------------- 328 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHh-------------
Confidence 3467888899999999999999999999999998884 5555 599999999999999999999987
Q ss_pred cccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 006710 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (634)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~ 249 (634)
++.++++....+.++. +...|...++.+-+..+++ +++.+++....-.+.+.++|.+-
T Consensus 329 ---------------~~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~~e------~g~v~~~is~i~~l~~~~~~~~~ 386 (463)
T KOG2816|consen 329 ---------------TETWMMFAAGVVVALA-GIVFPAIRAFASILVSPEE------QGKVFGIISGIEGLSGVVSPALY 386 (463)
T ss_pred ---------------ccchhhhHHHHHHHhh-cchhHHHHhHHHhhccccc------ccchhhHHHHHHHHhhhhhHHHH
Confidence 5677777777555444 6678999999999999999 99999999999999999999887
Q ss_pred HHHh
Q 006710 250 VYIQ 253 (634)
Q Consensus 250 ~~l~ 253 (634)
+.+.
T Consensus 387 ~~i~ 390 (463)
T KOG2816|consen 387 GNIF 390 (463)
T ss_pred HHHH
Confidence 6553
No 263
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.60 E-value=0.0093 Score=62.99 Aligned_cols=184 Identities=13% Similarity=0.046 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~ 150 (634)
+.+...........+|++.+.+-.- ...-|++...+|.+.....++..++.++.|.++||.-.-|.++++......++.
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l~~~-l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~ 346 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLLNLA-LCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGT 346 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhhhc-cccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 4444444444445555554443222 234577888999999999999999999999999997233445555555544443
Q ss_pred HHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhH
Q 006710 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (634)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 230 (634)
..+..... .+ ...+.++..-.+.|++..+..|...-+..|..-+..+ +..
T Consensus 347 ~~l~~~t~----~~--------------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E------~tS 396 (480)
T KOG2563|consen 347 LMLLTCTL----FL--------------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE------GTS 396 (480)
T ss_pred HHHHHhhc----cC--------------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC------ccc
Confidence 21111111 11 2234555556788888888889888888886555542 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc----hHHHHHHHHHHHHHHHHHHHHhcccccc
Q 006710 231 FNFFYLSVTVGAIVAFTLVVYIQMEHG----WGSAFGALAIAMGISNMLFFIGTPLYRH 285 (634)
Q Consensus 231 ~~~~~~~~~lg~~~~p~i~~~l~~~~g----w~~~f~~~~~~~~i~~~~~~~~~~~~~~ 285 (634)
.|+.+...++.+.+-.++-+...+..+ |...-+.......+.+++..+.++.+++
T Consensus 397 sGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 397 SGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred ceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 455555555555555666677666655 3322233333333444444444544443
No 264
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.34 E-value=0.024 Score=64.02 Aligned_cols=178 Identities=13% Similarity=0.081 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLG-ISQASSVLGGFLADAY-LGRYWTIAIFTTIYLA 148 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~l~~G~lsDr~-~GRr~~i~~~~~~~~~ 148 (634)
+....+...++...+.+..+++|.|+.++++.+.+.+..+++...+ +.+++..++|++.-|+ +.-|.+..+.++..++
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 6677788889999999999999999999999999999999976654 5568899999999886 3455555555555444
Q ss_pred HHHHHHHhhhh-----------------cccCCCC---Ccccc---------------c-----c-----------cc--
Q 006710 149 GLTGITLCATM-----------------KVFMPNQ---DNCDR---------------I-----S-----------QL-- 175 (634)
Q Consensus 149 ~~~~~~~~~~~-----------------~~~~~~~---~~~~~---------------~-----~-----------~~-- 175 (634)
.++......++ +....++ +.|+. + | .+
T Consensus 474 ~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~ 553 (735)
T KOG3626|consen 474 SLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDG 553 (735)
T ss_pred HHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCC
Confidence 43331110000 0000111 01321 0 0 00
Q ss_pred ----------------c-----CCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHH
Q 006710 176 ----------------L-----GSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFF 234 (634)
Q Consensus 176 ----------------~-----~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 234 (634)
+ +.|+.+.......|++..++.-+..+...+....++-...++++ |.-++|+.
T Consensus 554 ~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~------ks~AlG~~ 627 (735)
T KOG3626|consen 554 NTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEE------KSFALGFQ 627 (735)
T ss_pred ceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchh------chhhhHHH
Confidence 0 12444544444445544444444445555566667778899998 99999995
Q ss_pred HH-HHHHHHHHHHHHHHHHhh
Q 006710 235 YL-SVTVGAIVAFTLVVYIQM 254 (634)
Q Consensus 235 ~~-~~~lg~~~~p~i~~~l~~ 254 (634)
.+ .-.+|..-+|++-|++.|
T Consensus 628 ~~~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 628 WMLIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred HHHHHHHhcCCchHhhhhhHh
Confidence 55 567788889999999876
No 265
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.28 E-value=2.4 Score=46.65 Aligned_cols=175 Identities=11% Similarity=0.039 Sum_probs=94.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhccchhHHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVM---HKSFADSSNAVNNFLG-ISQASSVLGGFLADAYLGRYWTIAI 141 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~s~~~~~~~~~~~~~-~~~~~~l~~G~lsDr~~GRr~~i~~ 141 (634)
.-++.++.+.+.-|+..+.+..+.. +.+.+ ..+++....+-....+ ...+...+-.++++++ +|.+++.+
T Consensus 21 ~E~~k~~~l~~m~f~i~f~y~~lR~-----~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~ 94 (491)
T PF03219_consen 21 SELKKFLPLALMFFFILFNYTILRD-----LKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYI 94 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----hcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHH
Confidence 3455577777766666555543322 22211 1234444444443333 4455677889999997 99999888
Q ss_pred HHHHHHHHHHHHHHhhhhc---ccCCCCCccccccc-ccCCCCCc-cchhHHHHHHHHHHHHHhhhchhh-hHHHHhhcc
Q 006710 142 FTTIYLAGLTGITLCATMK---VFMPNQDNCDRISQ-LLGSCEPA-KSWQMLYLYTVLYITGFGAAGIRP-CVSSFGADQ 215 (634)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~-~~~~~~ad~ 215 (634)
....+.....+.++... | .++|+ ..|.+.+. ...+.++. .-.+.|.+.+.-++.-+-.....+ .-..+..|.
T Consensus 95 ~~~~F~~fF~~f~~vly-P~~~~lhp~-~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~i 172 (491)
T PF03219_consen 95 IIIPFLGFFALFAFVLY-PNRDILHPD-AFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEI 172 (491)
T ss_pred HHHHHHHHHHHHHHHHh-hchhhcCCC-HHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 87777776666665422 2 12221 01110000 00000000 000001111111111122222222 357788999
Q ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 216 FDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (634)
Q Consensus 216 ~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~ 254 (634)
++.++ -.+.+++++.+.|+|..++..+..++.+
T Consensus 173 tt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 173 TTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred CCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 8899999999999999999988888776
No 266
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.15 E-value=0.11 Score=53.10 Aligned_cols=94 Identities=14% Similarity=0.102 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCC
Q 006710 501 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNI 580 (634)
Q Consensus 501 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~ 580 (634)
+.|+.-..|+++..-..+..+....-+.+....+.-|...|++++..-+-..+ +.-++.+..+ +.=++
T Consensus 325 ~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsi---lT~iVvd~~g---------~~L~i 392 (433)
T KOG3810|consen 325 HIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSI---LTLIVVDDRG---------LGLDI 392 (433)
T ss_pred ceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHh---heEEEEcccc---------cCCCc
Confidence 56777888999988888888888888887777888888888887654333332 3333333211 11011
Q ss_pred cc--chhhHHHHHHHHHHHHHHHHHHHh
Q 006710 581 NT--GRFDYLYWLLAVLSVINFCAFLYS 606 (634)
Q Consensus 581 ~~--~~~~~~f~~~a~~~~v~~~~~~~~ 606 (634)
.. .-+..+|.+++++.++.....+..
T Consensus 393 r~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 393 RTQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred ceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 10 012346788888888776654433
No 267
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.89 E-value=0.045 Score=58.04 Aligned_cols=166 Identities=14% Similarity=0.048 Sum_probs=113.2
Q ss_pred HHHhHhhHHHHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCC
Q 006710 374 TLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGA 453 (634)
Q Consensus 374 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~ 453 (634)
.++....+.+...+.|....++.+.+.++ .+.... ..+....+.++..++.+|+.+...||...|..+||
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk------~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR--- 102 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHK------WSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRR--- 102 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcc------cccccccccccccceeccccccccccccccccccc---
Confidence 34444444455566677666666655543 344332 35566777889999999999999999988876543
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccC-CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 006710 454 SQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLT-AMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAP 532 (634)
Q Consensus 454 ~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P 532 (634)
..+.++.+...+++++.++....... +-|++.. ..+ ......++.+.++=++.-+...+.=++..+..-
T Consensus 103 ---PfI~~~s~~i~~~l~Lig~aaDig~~------lgd~~~~~~~~-rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~ 172 (498)
T KOG0637|consen 103 ---PFILAGSLLIAVSLFLIGYAADIGLL------LGDNERKPVKP-RAIVLFILGFWLLDVANNTLQGPCRALLADLAR 172 (498)
T ss_pred ---chHHHhhHHHHHHHhhhhhHhhhhHH------hcCCcccccch-HHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhcc
Confidence 44778888888888877655422111 1111111 111 234455666777778888889999999999977
Q ss_pred hhhHHH-HHHHHHHHhHHHHHHHHHHHH
Q 006710 533 DAMKSI-GSAYAALAGGLGCFAASILNS 559 (634)
Q Consensus 533 ~~~rg~-~~g~~~~~~~ig~~lg~~l~~ 559 (634)
...+-+ +++.+.+...+|+.+|-.+.+
T Consensus 173 ~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 173 GDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred ChhhhhccchhHHHHHHhcceeeeeccc
Confidence 777777 999999999999999987765
No 268
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.71 E-value=0.31 Score=52.59 Aligned_cols=60 Identities=15% Similarity=0.175 Sum_probs=53.3
Q ss_pred hhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 006710 185 WQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (634)
Q Consensus 185 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~ 250 (634)
.+.++++.+.+++++|.=+..|...++++.+.|++- .+..++.|.++...|..++..+.+
T Consensus 392 ~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~------~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 392 VSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL------KSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred cCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH------HHHHHHHHHHHHHHHHHhhceecc
Confidence 578899999999999999999999999999999987 888899999888888887776665
No 269
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.69 E-value=0.15 Score=55.55 Aligned_cols=136 Identities=16% Similarity=0.140 Sum_probs=88.0
Q ss_pred HHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHH
Q 006710 430 LILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQY 509 (634)
Q Consensus 430 l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~ 509 (634)
..-|+++.+.|-+--+ |.+++.-+.+|.++..++.+.++..... . .+.......+
T Consensus 39 ~~Kp~~g~lsD~~pi~------G~rr~~Y~~i~~~~~~~~~~~~~~~~~~------------------~-~s~~~~~~~l 93 (433)
T PF03092_consen 39 SIKPLYGLLSDSFPIF------GYRRKPYMIIGWLLGAVSALVLALLPAS------------------E-SSAAIAVVLL 93 (433)
T ss_pred HHhhhHHhhccccccc------CCcchHHHHHHHHHHHHHHHHHHhcccc------------------c-chhhhHHHHH
Confidence 5567788888876422 1344566777877776666655544321 0 1333444555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc---chhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhh
Q 006710 510 CLIGIAEVFCIVGLLEFLYEEA---PDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFD 586 (634)
Q Consensus 510 ~l~g~g~~~~~~~~~~~~~~~~---P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~ 586 (634)
.+..+|.++......+...|.. |.+ +|...+..+.++.+|+.++..+.|.+.+..+ .+
T Consensus 94 ~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~------------------~~ 154 (433)
T PF03092_consen 94 FLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG------------------PQ 154 (433)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC------------------Ce
Confidence 6677888888887777777764 444 8889999999999999999999887765322 12
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Q 006710 587 YLYWLLAVLSVINFCAFLYSAYR 609 (634)
Q Consensus 587 ~~f~~~a~~~~v~~~~~~~~~~~ 609 (634)
..|.+.+++..+..+..+++..+
T Consensus 155 ~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 155 GVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred EEehHHHHHHHHHHHHHHHhhhh
Confidence 33566666666665555555554
No 270
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.42 E-value=0.08 Score=56.28 Aligned_cols=124 Identities=13% Similarity=0.117 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh---
Q 006710 458 RVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDA--- 534 (634)
Q Consensus 458 ~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~--- 534 (634)
-+.+|.++..+|.+++.+...... ..+ . .+...+.+...++++|.++.-|....+..++.+++
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~~---~~~----------~-~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~ 68 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPPS---LPS----------G-IQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDS 68 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSSS---C-----------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTT
T ss_pred hhhHHHHHHHHHHHHhHHHHhcch---hhh----------h-HHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchh
Confidence 367888888888887655431100 000 1 24456677788899999999999999999999876
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHhhccceec
Q 006710 535 MKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYR 613 (634)
Q Consensus 535 ~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~v~~~~~~~~~~~~~~~ 613 (634)
.|..+..+++...++|+.++..+.+.+.+.. +| ...|++.++..+++.+.++.-.++++++
T Consensus 69 ~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~--------~~----------~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 69 RRDSFFNWFYWGINIGSLFSPTLVPYIQQNY--------GW----------FLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS---------H----------HHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhhhhHHHHHHHHhhhhHhhcccchhhcccc--------ch----------hhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 5667778889999999999998888776522 23 5667777777777777776665666554
No 271
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.20 E-value=1.6 Score=47.26 Aligned_cols=114 Identities=20% Similarity=0.127 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHhhhc--cchhHHHHHHHHHHHHHHHHHHHhhhhcc-cCCCCCcccccccccCCCCCccchhHHHHH
Q 006710 115 LGISQASSVLGGFLADAY--LGRYWTIAIFTTIYLAGLTGITLCATMKV-FMPNQDNCDRISQLLGSCEPAKSWQMLYLY 191 (634)
Q Consensus 115 ~~~~~~~~l~~G~lsDr~--~GRr~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (634)
..+..++.++.+.+++|. +||++++.++..+..++.++.-++...-. +.| +...+...+++.....
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~-----------t~~~~~~~~~~~~~~~ 357 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRP-----------TDSPPLLFTPSYYLAL 357 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCC-----------CcccccccccchhHHH
Confidence 344445566677777664 49999999999999888877776532100 111 1112222334444445
Q ss_pred HHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 006710 192 TVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (634)
Q Consensus 192 ~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p 246 (634)
+.-++.|++-+........++++.+| ++ |..+++++.+-..++..++-
T Consensus 358 ii~~l~G~~D~~~~t~~~~ii~~~~~-~~------~~~~fsi~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 358 IIGFLLGFGDACFNTQRYVIIALLYP-DD------RAQAFSLFKFYQSVASCVAF 405 (461)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhc-Cc------hHHHHHHHHHHHHHHHHHHh
Confidence 55578999999999999999999994 45 78888887666666555443
No 272
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.09 E-value=0.22 Score=52.86 Aligned_cols=63 Identities=8% Similarity=0.060 Sum_probs=53.7
Q ss_pred hhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 006710 185 WQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ 253 (634)
Q Consensus 185 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~ 253 (634)
++.+..++..+..|+..|....+....+.|..++++ |...++...++-++|..++.+++-++.
T Consensus 333 psi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 333 PSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 456667777788999999999999999999998888 999999999999999988887776654
No 273
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.63 E-value=1.3 Score=47.78 Aligned_cols=136 Identities=9% Similarity=-0.111 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCC
Q 006710 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (634)
Q Consensus 88 ~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (634)
.-..+..|+..+ |++....+..=+.-.+....+..+..++-+|+ |--|+=+++.....+...++..+...+...
T Consensus 277 f~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~~---- 350 (432)
T PF06963_consen 277 FGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGSP---- 350 (432)
T ss_pred CcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCCC----
Confidence 334577888877 99999999999999999999999999999998 999999999888877777666553221100
Q ss_pred cccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHH
Q 006710 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (634)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~ 247 (634)
....+...++.+..+-=+|-=++--+..-++-|..|+++ |+...+.-+...++.-.+-..
T Consensus 351 --------------~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 351 --------------FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred --------------chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHHH
Confidence 011344444444444445555556777888889999888 999999988777777766654
Q ss_pred HH
Q 006710 248 LV 249 (634)
Q Consensus 248 i~ 249 (634)
++
T Consensus 411 ~~ 412 (432)
T PF06963_consen 411 LT 412 (432)
T ss_pred HH
Confidence 43
No 274
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.22 E-value=1.2 Score=40.89 Aligned_cols=62 Identities=10% Similarity=0.020 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhh
Q 006710 501 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIK 562 (634)
Q Consensus 501 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~ 562 (634)
+.+.+++.-++.|+|.++..+..-.++.+...++.+++..+++....+.+..+|.++.-.+.
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888889999999999999999999999999999999999999998888887766554
No 275
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=92.58 E-value=15 Score=38.36 Aligned_cols=109 Identities=16% Similarity=0.081 Sum_probs=62.3
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCC
Q 006710 418 TCMPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAM 497 (634)
Q Consensus 418 ~~~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (634)
+.+...-.+...++.++.+.+.|+++||.. ..+-.++.+++. +....
T Consensus 72 a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~-----------cl~~cily~~sc----l~k~~------------------ 118 (354)
T PF05631_consen 72 AILFVAGFASSAIFGTFVGSLADRYGRKKA-----------CLLFCILYSLSC----LTKHS------------------ 118 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHH-----------HHHHHHHHHHHH----HHHhc------------------
Confidence 344555567778899999999999998842 222222222222 22110
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhcchhhHHHHHHHHH-HHhHHHHHHHHHHHHHh
Q 006710 498 PDLSAYWLLIQYCLIGIAEVFCIVGLLEFLY-----EEAPDAMKSIGSAYAA-LAGGLGCFAASILNSII 561 (634)
Q Consensus 498 ~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~-----~~~P~~~rg~~~g~~~-~~~~ig~~lg~~l~~~v 561 (634)
+ +...+++.-++.|++..+.....-+... +.+|++..+...+... +.+.+-..++..+...+
T Consensus 119 ~--~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 119 S--NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred c--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 2 4667778888899988888876655544 3456665555544444 22333333334343333
No 276
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=92.31 E-value=1.5 Score=44.86 Aligned_cols=119 Identities=17% Similarity=0.095 Sum_probs=69.5
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 006710 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFT 143 (634)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~ 143 (634)
.++.-|.++++...-++...+|- -.-++......++|. .++. ..........++.+.+-.++ |-|.++.++.
T Consensus 24 ~~~~~knv~i~s~~fl~~f~a~~-gl~nlq~~vn~~lg~----~sl~--~~y~~l~~s~m~~~~~Ir~~-g~K~tm~lav 95 (390)
T KOG3097|consen 24 RLGILKNVLILSIAFLLTFTAYL-GLQNLQTSVNYDLGT----VSLG--ALYLSLIDSSMFMPLLIRFL-GTKWTMVLAV 95 (390)
T ss_pred ccchhhhhhHHHHHHHHHHHHHH-HHHHHHHHHhcCccc----chhh--hhhHHHHHHHHHHHHHHHHH-hhHHHHHHHH
Confidence 34444566666666555555553 334555544443332 2211 11223334445555666665 9999998887
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCC
Q 006710 144 TIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDER 219 (634)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~ 219 (634)
..+... .++.. .+.+..++.+-...|++.+..+..-.++++++-...
T Consensus 96 ~~Y~ly-----iA~Nl------------------------~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~y 142 (390)
T KOG3097|consen 96 FPYALY-----IAANL------------------------EPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNY 142 (390)
T ss_pred HHHHHH-----HHhhc------------------------chhHHhhccHHHhhccccccccccCcceecHHHHHH
Confidence 655432 22111 046677787888999999999988888887765543
No 277
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=91.24 E-value=19 Score=39.40 Aligned_cols=58 Identities=7% Similarity=-0.023 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Q 006710 506 LIQYCLIGIAEVFCI-VGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKS 563 (634)
Q Consensus 506 v~~~~l~g~g~~~~~-~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~ 563 (634)
...|+...+-..++. -..+.++.|....++..+.-++..+..++|..+|+.+...+.+
T Consensus 132 ~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 132 ALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444 3789999999999999999999999999999999988877653
No 278
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=90.98 E-value=27 Score=38.04 Aligned_cols=166 Identities=10% Similarity=0.029 Sum_probs=103.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CChhHHHHHHHHHHH-HHHHHHHHHHHHhhhccchhHHHHH
Q 006710 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMH---KSFADSSNAVNNFLG-ISQASSVLGGFLADAYLGRYWTIAI 141 (634)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~s~~~~~~~~~~~~~-~~~~~~l~~G~lsDr~~GRr~~i~~ 141 (634)
.-++.++...+.-++..+.++.+.. +.+.+. .+++....+-+.+.+ .+.+..++-+++.+++ -|.+++.+
T Consensus 24 ~E~~kflpl~Ll~f~I~~ny~~lR~-----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~ 97 (509)
T COG3202 24 YELKKFLPLALLFFCILFNYNLLRS-----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYI 97 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHH
Confidence 3466677777777776666654432 344443 345556666666666 6678889999999997 99999998
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCcccccccccC---C--CCCc----------cchhHHHHHHHHHHHHHhhhchh-
Q 006710 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLG---S--CEPA----------KSWQMLYLYTVLYITGFGAAGIR- 205 (634)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~----------~~~~~~~~~~~~~l~g~g~g~~~- 205 (634)
-+..+....+++++... |- |+.-||+.. . -..| +.++...+++. .-+-.....
T Consensus 98 ~~~~F~~fF~LFa~Vi~-----P~---~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~---aELWgslV~S 166 (509)
T COG3202 98 ILGFFLGFFALFAFVIY-----PY---KDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIM---AELWGSLVLS 166 (509)
T ss_pred HHHHHHHHHHHHHHHHh-----cc---ccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHH---HHHHHHHHHH
Confidence 88888888888877633 11 111222210 0 0001 01122222221 111112222
Q ss_pred hhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 206 PCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (634)
Q Consensus 206 ~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~ 254 (634)
-.-..+..|++..++ -.|++++++...|++..++..+..++..
T Consensus 167 ~lFw~faNeitt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 167 LLFWQFANEITTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHhhhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 245567789998888 8899999999999999999888888765
No 279
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=90.96 E-value=14 Score=39.60 Aligned_cols=62 Identities=19% Similarity=0.281 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Q 006710 501 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKS 563 (634)
Q Consensus 501 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~ 563 (634)
+..++-+.-++.|++... -....+|++..+|++.--++.+......-+|.+++..++.++..
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556665566666766655 55678999999999999999999999999999999988887765
No 280
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=89.37 E-value=3.3 Score=44.96 Aligned_cols=57 Identities=14% Similarity=0.195 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 006710 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTL 248 (634)
Q Consensus 186 ~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i 248 (634)
+.+..++..++.|+..|-.......+..+..++++ |..+-.+..++.++|-.+|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 44566667789999999999999999999888776 7777777777778877777654
No 281
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=88.88 E-value=39 Score=36.75 Aligned_cols=60 Identities=10% Similarity=0.109 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHH
Q 006710 501 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSI 560 (634)
Q Consensus 501 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~ 560 (634)
+.++.++..+++|+..+........+..+..+++.|..+..++.+.-.+|-.+|+.+.-.
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556667888999999999999999999999999999999999999999988877543
No 282
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=88.31 E-value=44 Score=36.65 Aligned_cols=59 Identities=14% Similarity=0.102 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhh
Q 006710 504 WLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIK 562 (634)
Q Consensus 504 ~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~ 562 (634)
.++..+++..+.....+....+|-.+++.+..-|++|.+.|...++|+.--..++-.+.
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lV 465 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLV 465 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHh
Confidence 35677888888899999999999999999999999999999999999877665555443
No 283
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=86.40 E-value=6.5 Score=39.17 Aligned_cols=139 Identities=12% Similarity=0.064 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccchhH---HHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCcc
Q 006710 107 SSNAVNNFLGISQASSVLGGFLADAYLGRYW---TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAK 183 (634)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (634)
-|.+.+.|+++..+++-+...+..|- |.+ .+.+..++......+..+. . ...|.
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s--~~~ve~ymqivf~vs~a~l~Lpilt-~--~vsP~------------------ 340 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRS--SPKVESYMQIVFLVSIAALLLPILT-S--SVSPS------------------ 340 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcC--CcccchHHHHHHHHHHHHHHHHHHH-h--ccCCC------------------
Confidence 37778888887777776666665542 222 2333332222222221111 1 01121
Q ss_pred chhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHH
Q 006710 184 SWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFG 263 (634)
Q Consensus 184 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~ 263 (634)
+.++..-+++..+.-.+.|.++|.+.-+-.+..|++. |.+.++++..-.|+..-++-...-.-....+-|..|.
T Consensus 341 kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~ 414 (454)
T KOG4332|consen 341 KESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFG 414 (454)
T ss_pred cCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhh
Confidence 1334444666677778889999999999999999988 9999999998888755433211100011234567788
Q ss_pred HHHHHHHHHHH
Q 006710 264 ALAIAMGISNM 274 (634)
Q Consensus 264 ~~~~~~~i~~~ 274 (634)
++.+...++.+
T Consensus 415 icS~~~~~a~i 425 (454)
T KOG4332|consen 415 ICSAFLFVASI 425 (454)
T ss_pred hhHHHHHHHHH
Confidence 77776655544
No 284
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=85.33 E-value=8.4 Score=38.01 Aligned_cols=62 Identities=23% Similarity=0.249 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hhHHHHHHHHHH-HhHHHHHHHHHHHHHhhc
Q 006710 502 AYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPD-AMKSIGSAYAAL-AGGLGCFAASILNSIIKS 563 (634)
Q Consensus 502 ~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~-~~rg~~~g~~~~-~~~ig~~lg~~l~~~v~~ 563 (634)
.+.++....+.|++.+...+....++.+..|+ +.|+...+.... ...++..+++.+.+.+..
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555668889999999999999999998 678888888887 577788888866665544
No 285
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=79.27 E-value=37 Score=35.91 Aligned_cols=99 Identities=10% Similarity=0.143 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccc-cCCccc
Q 006710 505 LLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLA-QNINTG 583 (634)
Q Consensus 505 lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~-~~~~~~ 583 (634)
+...++++-+..+.--+.....+.....++.-|-++.........|.++|..+.-.+.. .+-...++. ...+++
T Consensus 136 lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s-----~dF~N~y~rs~P~~~g 210 (510)
T KOG3574|consen 136 LTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALES-----PDFCNTYLRSIPLDQG 210 (510)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecC-----hhhhhHHHhcCcCccc
Confidence 44455666666667677777777777778888888777777777777777655433222 000000100 011222
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHHhhc
Q 006710 584 --RFDYLYWLLAVLSVINFCAFLYSAY 608 (634)
Q Consensus 584 --~~~~~f~~~a~~~~v~~~~~~~~~~ 608 (634)
.+..++++.+.+.+++..+..++-+
T Consensus 211 ~ItL~gy~~fwg~~~~vat~Lv~~~kk 237 (510)
T KOG3574|consen 211 FITLAGYLWFWGALFIVATTLVALLKK 237 (510)
T ss_pred eEEhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 1345666667777766666555543
No 286
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=77.58 E-value=1.1e+02 Score=32.86 Aligned_cols=58 Identities=14% Similarity=0.209 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 006710 501 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILN 558 (634)
Q Consensus 501 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~ 558 (634)
+-+|.+....++|+..+-.....+.++.+..|++.+..+..++.+.-..|-++|..+.
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 4577777788899999999999999999999999999999999888888888877664
No 287
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=75.55 E-value=41 Score=36.89 Aligned_cols=56 Identities=13% Similarity=0.155 Sum_probs=42.6
Q ss_pred HHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 006710 195 YITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (634)
Q Consensus 195 ~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~ 256 (634)
++..+..-.......++-+.+.++.. =|+.|++.+...|+|+-.-..+.-++.+..
T Consensus 413 ~l~sf~stvmFVai~AFharISDP~I------GGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 413 VLSSFMSTVMFVAIMAFHARISDPAI------GGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCccc------chHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 45556666777888999999999998 899999999999988765555555554443
No 288
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=70.01 E-value=1.8e+02 Score=32.14 Aligned_cols=71 Identities=17% Similarity=0.171 Sum_probs=49.7
Q ss_pred HHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHH
Q 006710 197 TGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (634)
Q Consensus 197 ~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~ 272 (634)
.|+..-.....--..+.+++|++++ +...+|-+....++-..+-.++++.+.+..||+....+.-+.+++.
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~-----ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit 362 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPND-----YSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILIT 362 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHH
Confidence 4455555556666777888887754 7888888877777766666677888899999998776643333333
No 289
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.42 E-value=19 Score=30.24 Aligned_cols=31 Identities=19% Similarity=0.027 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 006710 119 QASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (634)
Q Consensus 119 ~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~ 149 (634)
.+.....||+-|||+|.++..++..++...+
T Consensus 56 ilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 56 ILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 3334566999999999998877766554433
No 290
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=66.09 E-value=2.3 Score=43.93 Aligned_cols=57 Identities=7% Similarity=0.153 Sum_probs=3.7
Q ss_pred hHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 006710 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTL 248 (634)
Q Consensus 186 ~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i 248 (634)
+.+..++..++.|+..|-.......+..+..++++ |..+-.+..++.++|-.+|..+
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --------------------HHHH---------------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 44666677789999999999999999999998777 6666666666666766666543
No 291
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=63.10 E-value=25 Score=31.89 Aligned_cols=90 Identities=9% Similarity=0.002 Sum_probs=51.7
Q ss_pred HHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhh
Q 006710 127 FLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRP 206 (634)
Q Consensus 127 ~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~ 206 (634)
.++||. .||+.+.+.+-.++|+..+.+...+...... +-+....+++..+++|+|. .+
T Consensus 56 ~Vs~RM--~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~-----------------dvP~~~~~~~S~~~Fg~gl---lG 113 (153)
T PF11947_consen 56 VVSNRM--LRRMAVFVGIPTALGVAVFVVFYYLKSRQIV-----------------DVPPWAVLLVSLVFFGLGL---LG 113 (153)
T ss_pred HHHHHH--HHHHHHHhchHHHHHHHHHHHHHHHHhcccc-----------------ccCchHHHHHHHHHHHHHH---Hh
Confidence 478998 4455555555555555555443222111100 0033445555555555553 34
Q ss_pred hHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHH
Q 006710 207 CVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIV 244 (634)
Q Consensus 207 ~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~ 244 (634)
..+.+++--.++++ -|+.+|+-.+-.|++-..
T Consensus 114 isYGilSaSWD~~r------~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 114 ISYGILSASWDPER------EGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhhhcccccCCCC------CCCcccHHHHHHhHHHHH
Confidence 56677777788887 799999988888876553
No 292
>PRK03612 spermidine synthase; Provisional
Probab=61.18 E-value=2.7e+02 Score=31.04 Aligned_cols=51 Identities=22% Similarity=0.161 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhh
Q 006710 511 LIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIK 562 (634)
Q Consensus 511 l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~ 562 (634)
+.++-.+...|.......+.. .+.-+...|-.+..+.+|+.+|+++.+.+.
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 345555555555555443322 222456677778888899999998888654
No 293
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=53.73 E-value=3.4e+02 Score=29.87 Aligned_cols=202 Identities=14% Similarity=0.084 Sum_probs=105.0
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHH-----
Q 006710 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI----- 139 (634)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i----- 139 (634)
-++|....+-.+.+++..+....+.- .+.++. .+..|+.-....+.++..++.+++|.+.--+ ++++-.
T Consensus 145 ~~~Ws~s~~Yi~aELWgslV~S~lFw----~faNei-tt~~eakRFy~lf~l~~ni~lllsg~~~~~~-~k~~~~~~~~~ 218 (509)
T COG3202 145 VGEWSYSLFYIMAELWGSLVLSLLFW----QFANEI-TTIEEAKRFYPLFGLGANISLLLSGEVTSWL-SKHRDALASEF 218 (509)
T ss_pred ecchHHHHHHHHHHHHHHHHHHHHHH----HHHHHh-hhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH-hhchhhHhHHH
Confidence 56787777777777777655532211 122221 3567888888999999999999998887755 542221
Q ss_pred ----HHHHHH--HHHHHHHHHHhhhhcc-cCCCCCccccccccc--CCCCCccchhHHHHHHHH---------HHHHHhh
Q 006710 140 ----AIFTTI--YLAGLTGITLCATMKV-FMPNQDNCDRISQLL--GSCEPAKSWQMLYLYTVL---------YITGFGA 201 (634)
Q Consensus 140 ----~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------~l~g~g~ 201 (634)
.-...+ .+.+.+.+.+.-..-. ....+-.+.....+. ..-+..-..+.-.+.=+| +.-|++.
T Consensus 219 ~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~i 298 (509)
T COG3202 219 KDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSI 298 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 111111 1111222221110000 000000010000000 000000011122222222 2344555
Q ss_pred hchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHH-HHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q 006710 202 AGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVG-AIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (634)
Q Consensus 202 g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg-~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 277 (634)
-.....--+-+.+.+|.+.. +...++-+....++- ..+.-.+++-+.+..||-+.-.+.-+.+++..++++
T Consensus 299 nLvE~~wKs~ik~~~~~~~~-----~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~lFF 370 (509)
T COG3202 299 NLVEGVWKSGIKELYPTTNE-----YTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVLFF 370 (509)
T ss_pred HHHHHHHHHhHHHhcCChhH-----HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 55556666677888887763 778888876665555 444555677888889999887777666666665554
No 294
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=52.75 E-value=30 Score=31.44 Aligned_cols=50 Identities=10% Similarity=0.001 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHH
Q 006710 501 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFA 553 (634)
Q Consensus 501 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~l 553 (634)
++..++..++++|+|... ..+-+.+....++..|...|+-.+..+++...
T Consensus 96 ~~~~~~~S~~~Fg~gllG---isYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLGLLG---ISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred chHHHHHHHHHHHHHHHh---hhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 444555566666665554 34555666677788899999988888877654
No 295
>PF12832 MFS_1_like: MFS_1 like family
Probab=51.36 E-value=46 Score=26.33 Aligned_cols=30 Identities=17% Similarity=0.116 Sum_probs=24.8
Q ss_pred CccccchhHHHHHHHHHHHHHHHhhhhccc
Q 006710 417 VTCMPVFPGLSIFLILSLYYSTFVPLCRRI 446 (634)
Q Consensus 417 ~~~~~~~~~~~~~l~~~~~~~~~~~l~rr~ 446 (634)
.+.+..+..+..++..|+.+.+.||..++.
T Consensus 37 iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 37 IGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 456677778888899999999999998873
No 296
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=50.40 E-value=25 Score=34.97 Aligned_cols=63 Identities=13% Similarity=0.006 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHH---------hhhccchhHHH
Q 006710 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFL---------ADAYLGRYWTI 139 (634)
Q Consensus 75 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~l---------sDr~~GRr~~i 139 (634)
-+..+.+.++.....+++..|+++ .|.++...+.+..+..+.-++..++.|.. -||+ |||+..
T Consensus 23 GvGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~w 94 (412)
T KOG4830|consen 23 GVGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSW 94 (412)
T ss_pred chhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeee
Confidence 345677777777788888999886 57778777788888899999999998855 4676 988753
No 297
>PRK10263 DNA translocase FtsK; Provisional
Probab=49.62 E-value=2e+02 Score=35.48 Aligned_cols=13 Identities=31% Similarity=0.547 Sum_probs=8.3
Q ss_pred HHHHHHHHHhhhc
Q 006710 120 ASSVLGGFLADAY 132 (634)
Q Consensus 120 ~~~l~~G~lsDr~ 132 (634)
.+..+|.|++|-+
T Consensus 63 l~GiVGA~LAD~L 75 (1355)
T PRK10263 63 LGGMPGAWLADTL 75 (1355)
T ss_pred ccchHHHHHHHHH
Confidence 4556777777754
No 298
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=48.45 E-value=53 Score=37.06 Aligned_cols=68 Identities=19% Similarity=0.173 Sum_probs=57.8
Q ss_pred cchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 006710 183 KSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (634)
Q Consensus 183 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~~~ 256 (634)
+.-+..+++--.+++|++.........-+.=+++|++- |..+.+++.....+|..+...+...+....
T Consensus 454 ~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sM------kS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 454 NPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESM------KSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred CCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34677788888899999999988888889999999999 999999999999999999998876655433
No 299
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=47.38 E-value=1e+02 Score=22.46 Aligned_cols=36 Identities=8% Similarity=0.091 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 006710 112 NNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (634)
Q Consensus 112 ~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~ 147 (634)
........+.....|+..|+.+|.++...+..++..
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG 42 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLG 42 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 334445556667888889998898776655544433
No 300
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=42.13 E-value=61 Score=34.60 Aligned_cols=128 Identities=13% Similarity=0.014 Sum_probs=72.4
Q ss_pred HHHHHHHHHhCC---ChhHHHHHHHH-HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCC
Q 006710 91 NMVTFMFYVMHK---SFADSSNAVNN-FLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (634)
Q Consensus 91 ~l~~yl~~~~~~---s~~~~~~~~~~-~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (634)
..|.+..+..+- +..-.-..... |.+.-.+|.+...++-+. +||.. .+..++-.+...+..++...+
T Consensus 265 iFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l-~i~v~lR~lfiPlF~~cn~~~------ 335 (406)
T KOG1479|consen 265 IFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKL-TIPVLLRLLFIPLFLLCNYPP------ 335 (406)
T ss_pred ecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCcee-hHHHHHHHHHHHHHHHhccCC------
Confidence 345555543322 22333444444 777777777777666653 44444 344444444444444332111
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 006710 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (634)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p 246 (634)
.+..-.+.++++..-.++|+..|=...+...+..+..|+++ +..+-++.......|-..|.
T Consensus 336 -------------~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e------~e~aG~~m~~fl~~Gl~~G~ 396 (406)
T KOG1479|consen 336 -------------LPVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE------KEAAGNLMVFFLVGGLALGS 396 (406)
T ss_pred -------------CCceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHH------HHHHHHHHHHHHHHHHHHhh
Confidence 01111345677777789999999999999999999988887 44444444444445544443
No 301
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=41.52 E-value=1.2e+02 Score=30.21 Aligned_cols=27 Identities=19% Similarity=0.131 Sum_probs=17.8
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHHH
Q 006710 533 DAMKSIGSAYAALAGGLGCFAASILNS 559 (634)
Q Consensus 533 ~~~rg~~~g~~~~~~~ig~~lg~~l~~ 559 (634)
+-+|..++|+..+..+..+.+.....+
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~g 100 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWASG 100 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 566777777777766666666665554
No 302
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=37.85 E-value=3.7e+02 Score=25.64 Aligned_cols=34 Identities=18% Similarity=0.159 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Q 006710 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (634)
Q Consensus 234 ~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~ 268 (634)
.+...-++..+|..+++++.+..+.+ ..+++.+.
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~~~ 200 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYRRLGFW-ALLLPALL 200 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHH
Confidence 33444455555555666666666643 44444433
No 303
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=33.81 E-value=3e+02 Score=32.02 Aligned_cols=27 Identities=19% Similarity=0.170 Sum_probs=20.3
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHh
Q 006710 130 DAYLGRYWTIAIFTTIYLAGLTGITLC 156 (634)
Q Consensus 130 Dr~~GRr~~i~~~~~~~~~~~~~~~~~ 156 (634)
|++-||.+-++++.++++++++...+.
T Consensus 51 ~~~~~R~~~l~it~~~f~i~sl~v~ll 77 (701)
T TIGR01667 51 DRLTGRLKNLIITLSCFSIASFLVQLL 77 (701)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445577888899988888887776654
No 304
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=32.85 E-value=5.6e+02 Score=29.83 Aligned_cols=31 Identities=16% Similarity=0.172 Sum_probs=21.3
Q ss_pred HHHhh---hccchhHHHHHHHHHHHHHHHHHHHh
Q 006710 126 GFLAD---AYLGRYWTIAIFTTIYLAGLTGITLC 156 (634)
Q Consensus 126 G~lsD---r~~GRr~~i~~~~~~~~~~~~~~~~~ 156 (634)
+-++| ++-||.+-++++.+++.++++...+.
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll 77 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELL 77 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555 44578888888888888777665554
No 305
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=32.36 E-value=5.7e+02 Score=26.64 Aligned_cols=16 Identities=38% Similarity=0.656 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHH
Q 006710 587 YLYWLLAVLSVINFCA 602 (634)
Q Consensus 587 ~~f~~~a~~~~v~~~~ 602 (634)
+.|++..++.+++.++
T Consensus 287 ~ly~~af~lIiiG~vv 302 (334)
T PF06027_consen 287 WLYILAFALIIIGFVV 302 (334)
T ss_pred HHHHHHHHHHHHHhhe
Confidence 4456544444444443
No 306
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=28.58 E-value=6.4e+02 Score=27.47 Aligned_cols=141 Identities=16% Similarity=-0.007 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc-hhHHHHHHHHHHHHH
Q 006710 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG-RYWTIAIFTTIYLAG 149 (634)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~G-Rr~~i~~~~~~~~~~ 149 (634)
.....+..++ +.|+-....|.-.-..+|++.++...+++.-.+...++.++--..-- +.| |-+.++.+.+.++.-
T Consensus 18 ~~~lglQH~l---amfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~-~~g~~lP~~lG~sFafi~p 93 (451)
T COG2233 18 LLLLGLQHLL---AMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTG-PGGSGLPSYLGSSFAFVAP 93 (451)
T ss_pred HHHHHHHHHH---HHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcc-CcccCCCeeEechHHHHHH
Confidence 4444444444 33444444566667789999999999999988888888888766433 324 445555555544433
Q ss_pred HHHHHHhhhhcccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhh
Q 006710 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (634)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 229 (634)
........ + ......+.+.+..|+..-...+.....+...||+-. -|.
T Consensus 94 -~i~~~~~~-----g--------------------~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvV------tG~ 141 (451)
T COG2233 94 -MIAIGGTT-----G--------------------DGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVV------TGP 141 (451)
T ss_pred -HHHHHhcc-----C--------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCce------EEe
Confidence 22222210 0 124455555555565554444333337888999987 444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 006710 230 FFNFFYLSVTVGAIVAFTLVVYIQ 253 (634)
Q Consensus 230 ~~~~~~~~~~lg~~~~p~i~~~l~ 253 (634)
..-+ +|-.+.|....+..
T Consensus 142 Vi~~------IGlsL~~vai~~~~ 159 (451)
T COG2233 142 VVLV------IGLSLAPVAINMAG 159 (451)
T ss_pred Eeee------ehhhhHHHHHHHhh
Confidence 4333 56666666555543
No 307
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=28.02 E-value=6.7e+02 Score=26.09 Aligned_cols=325 Identities=10% Similarity=0.046 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccccccCCCCCccchhH
Q 006710 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM 187 (634)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (634)
+.+...=.+-..+.-+..-+.-||+ ---.=+.+..++-+.+..+.+++ .+.
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rf-pf~~Ri~~~v~~sa~s~~lVafs----------------------------~s~ 115 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRF-PFGFRIALVVLLSALSFFLVAFS----------------------------NSV 115 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhc-ccchHHHHHHHHHhcceEEEEec----------------------------cch
Q ss_pred HHHHHHHHHHHHhhhchhhhHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh--ccchHHHHHHH
Q 006710 188 LYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM--EHGWGSAFGAL 265 (634)
Q Consensus 188 ~~~~~~~~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l~~--~~gw~~~f~~~ 265 (634)
++-+++..+..++.|.-...-.++-+.. .....+.|..+....+.+|..-=..+.+ +.+-+....+.
T Consensus 116 ~~sL~GV~~aSissGlGEiTFL~lss~Y-----------~~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~ 184 (409)
T KOG3880|consen 116 PMSLLGVVFASISSGLGEITFLALSSRY-----------PSIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIM 184 (409)
T ss_pred hHHHhhhhhhhhcCCcceeehhhhhccC-----------CCceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHH
Q ss_pred HHHHHHHHHHHHHhccccccCCCCCCcHHHHHHHHHHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHH
Q 006710 266 AIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLD 345 (634)
Q Consensus 266 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (634)
..+-++-...+++ +.+.++..........-..-++.....
T Consensus 185 l~lP~lfa~~yf~----------------------------------------lL~~pes~~~ptl~~~~~~~~~~~~~~ 224 (409)
T KOG3880|consen 185 LFLPALFAFAYFF----------------------------------------LLKSPESVYSPTLQPSTEIIPSQYLPF 224 (409)
T ss_pred HHHHHHHHHHHHh----------------------------------------eeCCCccccCCCcCccceeccCCCCcc
Q ss_pred HHHhhhccccCCCCCCccccchhhhHHHHHHhHhhHHHHHHHHHHHHHhhhhHHHHHHhhcccCC---CCccccCcc---
Q 006710 346 KAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHM---GKLKLPVTC--- 419 (634)
Q Consensus 346 ~a~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--- 419 (634)
.+............+ .+..|++...+..++-....|.. .+++.|+..-...+ .|+..+...
T Consensus 225 ~a~e~~sv~s~~~~~--------~e~~~~i~pll~~MvPL~~VY~~-----EY~INQGl~ell~F~c~~g~sls~~sqYR 291 (409)
T KOG3880|consen 225 EAAEEKSVPSRRLGL--------KETLKRIKPLLKYMVPLALVYFA-----EYFINQGLAELLLFPCSHGFSLSKDSQYR 291 (409)
T ss_pred cccccccCchhhhcH--------HHHHHHHHHHHHHHHHHHHHHHH-----HHHHhhhhHhhEEeccccCCccchhhcch
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCC
Q 006710 420 -MPVFPGLSIFLILSLYYSTFVPLCRRITGHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMP 498 (634)
Q Consensus 420 -~~~~~~~~~~l~~~~~~~~~~~l~rr~~~~~~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (634)
++...-+.+.+........--|..+- +.+-.++-.+-++.-.+.. -.|
T Consensus 292 wyqvlYQlGVFiSRSS~~~~~~p~l~~-------------LailQ~vNl~ff~~~a~~~------------------ftp 340 (409)
T KOG3880|consen 292 WYQVLYQLGVFISRSSINLFTMPYLWL-------------LAILQFVNLLFFLLQAWYW------------------FTP 340 (409)
T ss_pred hhheeeeeeEEEEeccceEEechHHHH-------------HHHHHHHHHHHHHHHHHHH------------------hcc
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 006710 499 DLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILN 558 (634)
Q Consensus 499 ~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~ 558 (634)
+.+.+....++-|+-.+..+....--+.+..+++.|..+|+.......+|-.++.++.
T Consensus 341 --si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 341 --SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred --HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
No 308
>COG3619 Predicted membrane protein [Function unknown]
Probab=26.82 E-value=6.1e+02 Score=24.80 Aligned_cols=67 Identities=10% Similarity=0.046 Sum_probs=31.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccch
Q 006710 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFY-------VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR 135 (634)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-------~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GR 135 (634)
+-..++.+...+...++|.........+.+. .+.-++..-........+...++...+..++.|. .|
T Consensus 11 ~l~~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~-~~ 84 (226)
T COG3619 11 RLGLLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRA-TR 84 (226)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc
Confidence 3345556666666666664333322222221 2222333333344444555556656666666654 54
No 309
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.54 E-value=3.3e+02 Score=23.19 Aligned_cols=33 Identities=6% Similarity=0.010 Sum_probs=25.9
Q ss_pred chhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcc
Q 006710 532 PDAMKSIGSAYAALAGGLGCFAASILNSIIKSV 564 (634)
Q Consensus 532 P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~ 564 (634)
.++.++.++++--.+-.+++.+...++|++.+.
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~ 68 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDK 68 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356778888888888888888888888887764
No 310
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=25.32 E-value=8.3e+02 Score=25.86 Aligned_cols=97 Identities=13% Similarity=0.138 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH----HHHH-HHhhhhcccCC
Q 006710 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG----LTGI-TLCATMKVFMP 164 (634)
Q Consensus 90 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~lsDr~~GRr~~i~~~~~~~~~~----~~~~-~~~~~~~~~~~ 164 (634)
..+..|+ .|=+.-+.+.+++.|...+.+++.+.=++.|.- ---+-+..=.++-.+| .++. .++. ..
T Consensus 31 ~tLatyL---lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~-~~~~Fv~vElllgligg~Sa~~ly~~FA~-----~~ 101 (508)
T COG4262 31 GTLATYL---LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDA-ALARFVDVELLLGLIGGVSAAALYLLFAL-----ES 101 (508)
T ss_pred HHHHHHh---cCCceeehHHHHHHHHHHhchhhhhhccccCch-HHHHHHHHHHHHHHhccchHHHHHHHHHh-----cc
Confidence 3445554 355667888999999999988888887776642 2222222222222221 1111 1111 00
Q ss_pred CCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhhchhhhHHHHhhc
Q 006710 165 NQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGAD 214 (634)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ad 214 (634)
. ...+.+++.-.++|.-.|.-.|....+.-.
T Consensus 102 ~-------------------~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 102 A-------------------PSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred c-------------------hHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 0 355777788889999999999998888755
No 311
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=24.71 E-value=34 Score=30.22 Aligned_cols=12 Identities=17% Similarity=-0.111 Sum_probs=5.1
Q ss_pred HHHHHHHHHHHH
Q 006710 259 GSAFGALAIAMG 270 (634)
Q Consensus 259 ~~~f~~~~~~~~ 270 (634)
||++++.+++.+
T Consensus 1 RW~l~~iii~~i 12 (130)
T PF12273_consen 1 RWVLFAIIIVAI 12 (130)
T ss_pred CeeeHHHHHHHH
Confidence 344444444333
No 312
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=24.19 E-value=3.4e+02 Score=21.42 Aligned_cols=42 Identities=17% Similarity=0.370 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Q 006710 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (634)
Q Consensus 232 ~~~~~~~~lg~~~~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (634)
-+++....++++++- +.||+.++ .+..+++.++.+++++++.
T Consensus 11 ~l~~~il~~~~iisf-i~Gy~~q~--~~~~~~~~~~g~~~~~lv~ 52 (76)
T PF06645_consen 11 KLMQYILIISAIISF-IVGYITQS--FSYTFYIYGAGVVLTLLVV 52 (76)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHhhe
Confidence 345555666666664 66777665 3455555555555555443
No 313
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=24.06 E-value=2.8e+02 Score=23.33 Aligned_cols=18 Identities=17% Similarity=0.095 Sum_probs=10.4
Q ss_pred HHHHHHHHhhhccchhHH
Q 006710 121 SSVLGGFLADAYLGRYWT 138 (634)
Q Consensus 121 ~~l~~G~lsDr~~GRr~~ 138 (634)
...+.|..-|+.+|-.+.
T Consensus 58 ~G~~lG~WLD~~~~t~~~ 75 (100)
T TIGR02230 58 LGVAVGIWLDRHYPSPFS 75 (100)
T ss_pred HHHHHHHHHHhhcCCCcH
Confidence 334556666766676553
No 314
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=23.31 E-value=7.7e+02 Score=24.76 Aligned_cols=258 Identities=11% Similarity=0.021 Sum_probs=0.0
Q ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHH-----hhccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCc
Q 006710 218 ERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYI-----QMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSP 292 (634)
Q Consensus 218 ~~~~~~~~~r~~~~~~~~~~~~lg~~~~p~i~~~l-----~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 292 (634)
.++ |+....+-.++.++|+.++-+.-..- .....|++.+.+.+++..+-++++...-++.....++.+
T Consensus 1 ~k~------K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k- 73 (267)
T PF07672_consen 1 QKK------KSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEK- 73 (267)
T ss_pred CCc------cceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcccc-
Q ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCccccCCCcccccCCcchHHHHHHhhhccccCCCCCCccccchhhhHH
Q 006710 293 LTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEV 372 (634)
Q Consensus 293 ~~~~~~v~~~a~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (634)
+...+.....+....+.-+.+ +.
T Consensus 74 -------------------------------------~~k~~~~~~~~~s~~~~LK~K--------------------~t 96 (267)
T PF07672_consen 74 -------------------------------------QEKENSTLSKKPSYKSILKEK--------------------ET 96 (267)
T ss_pred -------------------------------------cccccccccccchHHHHHccc--------------------hH
Q ss_pred HHHHhHhhHHHHHHHHHHHHHhhhhHHHHHHhhcccCCCCccccCccccchhHHHHHHHHHHHH--HHHhhhhccccCCC
Q 006710 373 KTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPVTCMPVFPGLSIFLILSLYY--STFVPLCRRITGHP 450 (634)
Q Consensus 373 k~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~l~rr~~~~~ 450 (634)
......-..++...++-..........-....+.+.. ..........+...++......- ..+.++-|...+||
T Consensus 97 w~w~~~Yg~wLv~~V~p~t~~~~~~~~~~s~~ni~~~----~~~~~~~~~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk 172 (267)
T PF07672_consen 97 WKWILIYGIWLVVVVFPFTPSWFNILIWISPANIKSV----VSGGGFNWIIPIFQILFVAGYFLGPFTIGLWNKTNYKRK 172 (267)
T ss_pred HHHHHHHHHHheeEEEeccchhHhHhhhcCccccccc----ccccccchhhHHHHHHHHHHHhhhceeeccchhhhhhhh
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006710 451 RGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEE 530 (634)
Q Consensus 451 ~~~~~~~~i~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~ 530 (634)
.-....+.+|+++..++.++..... .....+.....+.-++.|+..-.+.+..+..-.|.
T Consensus 173 --~fi~~~~~~gi~~~~l~~~~~~~~g------------------~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEy 232 (267)
T PF07672_consen 173 --PFIHFIISLGIVFFVLSIVVVYFVG------------------PGNAAGFAFFYIFGFLAGFFLWGIQGVILNLPHEY 232 (267)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHhC------------------cchHHHHHHHHHHHHHHHHHHHhhhHHHhcChhhh
Q ss_pred --cchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Q 006710 531 --APDAMKSIGSAYAALAGGLGCFAASILNSIIKS 563 (634)
Q Consensus 531 --~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~ 563 (634)
..++..|...|+..-...+...+.-.+...+.+
T Consensus 233 K~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i~~ 267 (267)
T PF07672_consen 233 KGYNPKKIGIQFGLIWGFGYIFYTIYDIILSVIAD 267 (267)
T ss_pred cCCCcceehhHHHHHHHHHHHHHHHHHHHHHHhcC
No 315
>PHA03231 glycoprotein BALF4; Provisional
Probab=22.47 E-value=1.5e+02 Score=34.61 Aligned_cols=30 Identities=20% Similarity=0.399 Sum_probs=19.8
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Q 006710 534 AMKSIGSAYAALAGGLGCFAASILNSIIKS 563 (634)
Q Consensus 534 ~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~ 563 (634)
.+=+.+-++-+.+.++++++++.+.|++.-
T Consensus 670 gLG~vGk~vg~vv~~v~ga~~SiVsG~~sF 699 (829)
T PHA03231 670 GLGAVGKAVGNVVSGVAGAVGSIVSGVISF 699 (829)
T ss_pred hhhhhchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 444455566666777777777777776644
No 316
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=20.80 E-value=3.4e+02 Score=24.55 Aligned_cols=25 Identities=20% Similarity=0.219 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhH
Q 006710 112 NNFLGISQASSVLGGFLADAYLGRYW 137 (634)
Q Consensus 112 ~~~~~~~~~~~l~~G~lsDr~~GRr~ 137 (634)
.-|.++..+...+.|++.+|. .|++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~-~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERL-KRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhc-cccc
Confidence 457888888999999999997 6653
No 317
>KOG1935 consensus Membrane protein Patched/PTCH [Signal transduction mechanisms]
Probab=20.26 E-value=1e+03 Score=28.14 Aligned_cols=86 Identities=17% Similarity=0.169 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCCCCccccCC
Q 006710 501 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNI 580 (634)
Q Consensus 501 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~l~~~v~~~~~~~~~~~~~w~~~~~ 580 (634)
|..-.++.+...|+|.-|..-....|....-..+.|....-...+.--.=+.+++++.-+... .|
T Consensus 971 S~i~aViLi~sVGigveFtvhv~l~FlTs~G~rs~R~s~al~~~F~Pv~hG~lST~lgv~MLs----------~S----- 1035 (1143)
T KOG1935|consen 971 SAIPAVILIASVGIGVEFTVHVALGFLTALGTRSQRASSALQHMFVPVSHGALSTLLGVLMLS----------FS----- 1035 (1143)
T ss_pred ccchhHHHHHHhhhchhhhHHHHHHHHHhhccchhHhHHhhhhcchhhhhhHHHHHhhHheec----------cC-----
Confidence 444445555666777777777777777766654444433333333333334444444333222 12
Q ss_pred ccc-hhhHHHHHHHHHHHHHHH
Q 006710 581 NTG-RFDYLYWLLAVLSVINFC 601 (634)
Q Consensus 581 ~~~-~~~~~f~~~a~~~~v~~~ 601 (634)
+.. -..+||++++++.+++++
T Consensus 1036 ~FdFvVryFf~~ltvl~~lGv~ 1057 (1143)
T KOG1935|consen 1036 EFDFVVRYFFAVLTVLTCLGVL 1057 (1143)
T ss_pred chhHHHHHHHHHHHHHHHHHHh
Confidence 100 134678887776655543
Done!