BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006717
(634 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SW95|SYNC2_ARATH Asparagine--tRNA ligase, cytoplasmic 2 OS=Arabidopsis thaliana
GN=SYNC2 PE=2 SV=2
Length = 638
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/627 (55%), Positives = 449/627 (71%), Gaps = 17/627 (2%)
Query: 17 PVTLTWRYSNRVLLKTILESGDGGLGLVNERVVIGGWVKTSKEVKKEPMPPPPADFAGDA 76
P+TL+ +YS RV LKT+L+ D G GL +RVVIGGWVK+++ VKK PPP A +
Sbjct: 20 PITLS-KYSKRVELKTLLDRSDRGAGLAGKRVVIGGWVKSARAVKKNSPPPPLPVVAAPS 78
Query: 77 AAKSSKEKEKEKDVSCVEILQSRIPFFRTIIRVLGGSAGISNNVPLREKLEALVPK--PP 134
+ + ++ C EI+QS++ F+ VL G P+ +K E K PP
Sbjct: 79 PSSGGDQAHTTANIRCTEIIQSKMNIFKRFFDVLSGGG---KTYPIFDKTELAGQKAVPP 135
Query: 135 PPSTVFLQVSDGSCVASLQVVVESTL--VSPSKIRPIGTCLMVEGVLKQP-SVQGKHAVE 191
P + +SDGS ++SLQVVV+S L V +++ +GTC++ EGVL+ P + KH +E
Sbjct: 136 PEYVFYFLISDGSSISSLQVVVDSALSTVPATQLMALGTCIVAEGVLRLPLAASAKHVIE 195
Query: 192 LKVEKILHIGTVDHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFF 251
L+ EK+LH+GTVD +KYPLS+K+LP+ MLRD +HFRPRTTTV SV R+ S+LT A+HTF
Sbjct: 196 LEAEKLLHVGTVDPEKYPLSKKQLPLHMLRDFSHFRPRTTTVGSVTRVHSALTLASHTFL 255
Query: 252 QNHGFLYVQVPVITTTDSEGFSEKFQVTTLF----DKREKEGPKTAKDIEGVNLDILKAS 307
Q HGF YVQVPVITTT GF E F+VTTL DK EK+ P KD G ++D +KA
Sbjct: 256 QYHGFQYVQVPVITTT--TGFGEMFRVTTLLGKTDDKEEKKPPVQEKD--GFSIDTVKAV 311
Query: 308 IKEKSNKVEELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSED 367
IKEK+ ++ LKRS+SNRE ++AAV DL+KTN+L S +E + K VK +K++FS+D
Sbjct: 312 IKEKTRLIDHLKRSDSNRETVVAAVHDLKKTNDLASQIEMKQKSKTGTLVKPEKLDFSKD 371
Query: 368 FFSRQTYLTVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLE 427
FF R TYLT SGR HLESYA ALG VY+FGPRF A+K ++++H AE VETE+AF++L+
Sbjct: 372 FFGRDTYLTASGRFHLESYASALGKVYTFGPRFIADKIDNARHLAEKWNVETEMAFAELD 431
Query: 428 DAMKCADDYFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKAL 487
DAM CAD+YFKFLCK++LE+ +D++F+SKR+D T RL++ SSS + +YTE + L
Sbjct: 432 DAMDCADEYFKFLCKYVLENRDEDMKFISKRVDKTITTRLEATASSSLLRFSYTEVISLL 491
Query: 488 EKVTEKIFETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAA 547
+K T FETK EWGVALT EHLSYL DEIYK PVIV+ YPKA+K FYVRLNDD TVAA
Sbjct: 492 QKATTTKFETKPEWGVALTTEHLSYLTDEIYKGPVIVHTYPKAIKQFYVRLNDDKKTVAA 551
Query: 548 FDMVVPKGGTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFD 607
FD+VVPK G VITGSQNEER ++L+ RI E G RE++EWYLDLRRHGTVKHSG S +
Sbjct: 552 FDLVVPKVGVVITGSQNEERFEILDARIGESGFTREKFEWYLDLRRHGTVKHSGISLSME 611
Query: 608 LMVLFTTGLTDVRDAIPFPRSLGKAYN 634
M+L+ TGL D++DAIPFPRS GKA N
Sbjct: 612 QMLLYATGLPDIKDAIPFPRSWGKANN 638
>sp|Q9SW96|SYNC1_ARATH Asparagine--tRNA ligase, cytoplasmic 1 OS=Arabidopsis thaliana
GN=SYNC1 PE=2 SV=1
Length = 572
Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust.
Identities = 251/505 (49%), Positives = 346/505 (68%), Gaps = 18/505 (3%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSKIRPIGTCLMVEGVLKQPSVQGK---HAVELKVEK 196
FL V+DGSC A+LQV+V+ +L S + GTC+ V+GVLK P +GK +EL V K
Sbjct: 72 FLAVNDGSCPANLQVMVDPSLYDVSNLVATGTCVTVDGVLKVPP-KGKGTQQQIELNVVK 130
Query: 197 ILHIGTVDHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGF 256
++ +GTVD KYPL + +L ++ LRD H R RT ++++V RIR++L ATH+FFQ H F
Sbjct: 131 VIDVGTVDASKYPLPKTKLTLETLRDVLHLRSRTNSISAVARIRNALAFATHSFFQEHSF 190
Query: 257 LYVQVPVITTTDSEGFSEKFQVTTLFDKREK-------EGPKTAKDIEGVNLDILKASIK 309
LY+ P+ITT+D EG E FQ TTL + E+ P T D+E L ++
Sbjct: 191 LYIHTPIITTSDCEGAGEMFQATTLINYTERLEQDLIDNPPPTEADVEAARLIVI----- 245
Query: 310 EKSNKVEELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFF 369
E+ N V ELK +++++EA+ AAV +L+ E +H++ R +L K +++S+DFF
Sbjct: 246 ERGNVVAELKAAKASKEAITAAVAELKIAKETFAHIDERSRLRPGLPKKDGNIDYSKDFF 305
Query: 370 SRQTYLTVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDA 429
RQ +LTVSG+L +E+YACAL NVY+FGP FRAE +S+H AE MVE EIAF+ LED
Sbjct: 306 GRQAFLTVSGQLQVETYACALSNVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADLEDD 365
Query: 430 MKCADDYFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEK 489
M CA+ Y K++C W+LE C D+E ++K D CIDRL+ V S+ F +ITYT+A++ LE+
Sbjct: 366 MNCAEAYVKYMCNWLLEKCYADMELMAKNFDSGCIDRLKLVASTPFGRITYTKAIELLEE 425
Query: 490 VTEKI--FETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAA 547
K F+ +EWG+ L +EH YL + ++++P+IVYNYPK +K FY+RLNDD TVAA
Sbjct: 426 AVAKGKEFDNNVEWGIDLASEHERYLTEVLFQKPLIVYNYPKGIKAFYMRLNDDEKTVAA 485
Query: 548 FDMVVPKGGTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFD 607
D++VPK G +I GSQ EER D++ RI+E+GLP E YEWYLDLRR+GTVKH GF GF+
Sbjct: 486 MDVLVPKVGELIGGSQREERYDVIKKRIEEMGLPIEPYEWYLDLRRYGTVKHCGFGLGFE 545
Query: 608 LMVLFTTGLTDVRDAIPFPRSLGKA 632
M+LF TGL ++RD IPFPR GKA
Sbjct: 546 RMILFATGLDNIRDVIPFPRYPGKA 570
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 23 RYSNRVLLKTILESGDGGLGLVNERVVIGGWVKTSKEVKK 62
++SNRVL++TIL+ DGG GL + V IGGWVK+ ++ K
Sbjct: 28 QFSNRVLIRTILDRPDGGAGLAGQTVRIGGWVKSGRDQGK 67
>sp|Q9SSK1|SYNC3_ARATH Asparagine--tRNA ligase, cytoplasmic 3 OS=Arabidopsis thaliana
GN=SYNC3 PE=3 SV=1
Length = 571
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/546 (45%), Positives = 358/546 (65%), Gaps = 25/546 (4%)
Query: 104 RTIIR-VLGGSAGISNNVPLREKLEALVP---KPPPPSTVFLQVSDGSCVASLQVVVEST 159
R +IR +LGG A ++ + ++ V + + FL+V+DGSC A+LQV+V+S+
Sbjct: 32 RVLIRSILGGGAKLAGQ---KVRIGGWVKTGRQQGKGTFAFLEVNDGSCPANLQVMVDSS 88
Query: 160 LVSPSKIRPIGTCLMVEGVLK-QPSVQG-KHAVELKVEKILHIGTVDHDKYPLSRKRLPM 217
L S++ GTC+ V+GVLK P +G K ++EL VE ++ +GTVD YPL + +L
Sbjct: 89 LYDLSRLVATGTCVTVDGVLKIPPEGKGLKQSIELSVETVIAVGTVDPTTYPLPKTKLTP 148
Query: 218 DMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQ 277
+ LRD H R RT +++V RIR++L ATH+FFQ H FLY+ P+ITT+D EG E FQ
Sbjct: 149 EFLRDVLHLRSRTNLISAVARIRNALAFATHSFFQEHSFLYIHTPIITTSDCEGAGEMFQ 208
Query: 278 VTTLFDKREK-------EGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIA 330
VTTL + E+ P T D+E L +KE+ V +LK +++++E + A
Sbjct: 209 VTTLINHTERVEQDLIDNPPPTEADVEAARL-----IVKERGEAVAQLKVAKASKEEITA 263
Query: 331 AVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACAL 390
+V L ++H+E R +L K+++S DFF RQ +LTVSG+L +E+YACAL
Sbjct: 264 SVAQLSVAKASLAHVEERLRLKPGLPKNDGKIDYSNDFFGRQAFLTVSGQLQVETYACAL 323
Query: 391 GNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSK 450
+VY+FGP FRAE +S+H AE MVE EIAF+ + D M CA+ Y K++CKW+++ C
Sbjct: 324 SSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADIHDDMNCAEAYVKYMCKWLMDKCGD 383
Query: 451 DLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEK---IFETKLEWGVALTA 507
D+E + K +D C RL V +SF+++TYTEA++ LEK + +F+ K+EWG+ L +
Sbjct: 384 DMELMDKNVDEGCTKRLNMVAKASFKRVTYTEAIERLEKAVAQGKVVFDNKVEWGIDLAS 443
Query: 508 EHLSYLAD-EIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEE 566
EH YL + E ++P+IVYNYPK +K FY+RLNDD TVAA D++VPK G +I GSQ EE
Sbjct: 444 EHERYLTEVEFDQKPIIVYNYPKGIKAFYMRLNDDEKTVAAMDVLVPKVGELIGGSQREE 503
Query: 567 RIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFP 626
R D++ RI+E+GLP E YEWYLDLRR+GTVKH GF GF+ M+ F TG+ ++RD IPFP
Sbjct: 504 RYDVIKQRIEEMGLPMEPYEWYLDLRRYGTVKHCGFGLGFERMIQFATGIDNIRDVIPFP 563
Query: 627 RSLGKA 632
R GKA
Sbjct: 564 RYPGKA 569
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Query: 23 RYSNRVLLKTILESGDGGLGLVNERVVIGGWVKTSKEVKK 62
++S+RVL+++IL GG L ++V IGGWVKT ++ K
Sbjct: 28 QFSDRVLIRSIL---GGGAKLAGQKVRIGGWVKTGRQQGK 64
>sp|Q73P19|SYN_TREDE Asparagine--tRNA ligase OS=Treponema denticola (strain ATCC 35405 /
CIP 103919 / DSM 14222) GN=asnS PE=3 SV=1
Length = 473
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/496 (41%), Positives = 288/496 (58%), Gaps = 68/496 (13%)
Query: 139 VFLQVSDGSCVASLQVV------VESTLVSPSKIRPIGTCLMVEGVLKQPSVQGKHAVEL 192
VF++++DGSC AS+Q +++ + K G + V G L PS VEL
Sbjct: 34 VFIEINDGSCFASIQATFDRDTGLDNNTEALLKKAGTGVSVKVSGNL-VPSPAAGQRVEL 92
Query: 193 KVEKILHIGTVDHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQ 252
+ I G D +KYPL +KR M+ LRD AH R RT T +V RIRS + +A HTFFQ
Sbjct: 93 QANNIHIFGDADQEKYPLQKKRHSMEFLRDIAHLRARTNTFGAVARIRSQMAYAIHTFFQ 152
Query: 253 NHGFLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKS 312
GF YV P+IT +D EG E F VTT DIE + +K ++KEK
Sbjct: 153 ERGFQYVHTPIITGSDCEGAGEMFHVTTF-------------DIE----ETVKKALKEKK 195
Query: 313 NKVEELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQ 372
+ + K+++S+DFF +Q
Sbjct: 196 DP-------------------------------------------DSFKIDYSQDFFGKQ 212
Query: 373 TYLTVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKC 432
LTVSG+L E+YA AL +Y+FGP FRAE +S+H AE MVE E++F +++ M+
Sbjct: 213 ANLTVSGQLEGETYATALSRIYTFGPTFRAENSNTSRHLAEFWMVEPEMSFFTIKENMEL 272
Query: 433 ADDYFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTE 492
A+++ +L KW LE C +DLEF RI I+ L++V+++ F ++TYTEA+ LEK +
Sbjct: 273 AEEFIVYLLKWALEKCKEDLEFFDSRIKKGLIEMLKNVVNTPFTRLTYTEAIAELEKHID 332
Query: 493 KIFETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVV 552
+ FE K WG L +EH +L +E+YK PVIV NYPK +K FY++LN+DG TV A D++V
Sbjct: 333 R-FEFKPYWGCDLQSEHERFLTEEVYKGPVIVTNYPKEIKSFYMKLNEDGKTVRAMDVLV 391
Query: 553 PKGGTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLF 612
P G +I GS+ EE +D+L RIKELGL E Y WYLDLRR+GTV HSGF GF+ ++L+
Sbjct: 392 PGLGEIIGGSEREENLDILQGRIKELGLREEDYWWYLDLRRYGTVPHSGFGLGFERLLLY 451
Query: 613 TTGLTDVRDAIPFPRS 628
TG+ ++RD IPFPR+
Sbjct: 452 VTGMGNIRDVIPFPRA 467
>sp|P52276|SYN_SYNY3 Asparagine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=asnS PE=3 SV=2
Length = 462
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/492 (40%), Positives = 282/492 (57%), Gaps = 74/492 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSKIRP---IGTCLMVEGVLKQPSVQGKHAVELKVEK 196
F++V+DGS +A+LQVV++ +L ++ G L+VEG L PS VELK K
Sbjct: 36 FVEVNDGSSLANLQVVLDGSLADYDRLLSQLQTGAALVVEGKLA-PSPGKGQRVELKATK 94
Query: 197 ILHIGTVDHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGF 256
+ +G D YPL +KR + LR H RPRT T+ +VMR+R++ A H FFQ GF
Sbjct: 95 LELLGGADPGSYPLQKKRHSFEFLRTIGHLRPRTNTIGAVMRVRNACATAIHQFFQERGF 154
Query: 257 LYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVE 316
L+V P+IT A D EG D+ K + +
Sbjct: 155 LWVHTPIIT---------------------------ASDCEGAG-DLFKVTTLD------ 180
Query: 317 ELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLT 376
L+R N E +++S+DFF +Q YLT
Sbjct: 181 -LQRVPKNGEG----------------------------------IDYSQDFFGKQAYLT 205
Query: 377 VSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDY 436
VSG+L E A A NVY+FGP FRAE +S+H AE MVE E+AF LE + A+++
Sbjct: 206 VSGQLEAEVMALAFQNVYTFGPTFRAENSNTSRHLAEFWMVEPEMAFCDLEGDRQWAEEF 265
Query: 437 FKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFE 496
K++ K++LE C +D+EF +RID T + ++I++ F +TY+EA+K LEK +K FE
Sbjct: 266 LKYIFKFVLEKCPEDMEFFDQRIDNTVLATADNIINNEFAWLTYSEAIKLLEKADQK-FE 324
Query: 497 TKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGG 556
+ WGV L +EH YLA+ ++KRP IV +YPK +K FY+RLNDDG TVAA D++ PK G
Sbjct: 325 YPVAWGVDLQSEHERYLAETVFKRPTIVTDYPKDIKAFYMRLNDDGKTVAAMDILAPKIG 384
Query: 557 TVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGL 616
+I GSQ EER+D+L R++E G+P E WYLDLRR+G+V H+GF GF+ +V F TG+
Sbjct: 385 EIIGGSQREERLDILTQRMQEQGVPEEDLWWYLDLRRYGSVPHAGFGLGFERIVQFMTGM 444
Query: 617 TDVRDAIPFPRS 628
++RD IPFPR+
Sbjct: 445 ANIRDVIPFPRT 456
>sp|B8F3Y5|SYN_HAEPS Asparagine--tRNA ligase OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=asnS PE=3 SV=1
Length = 467
Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/530 (38%), Positives = 297/530 (56%), Gaps = 76/530 (14%)
Query: 103 FRTIIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVS 162
F TI +L G + V +R + + FL V DGSC +Q ++ + L +
Sbjct: 4 FPTISEILSGKVAVGEEVAVRGWVR--TRRDSKAGLSFLAVYDGSCFDPIQAIINNDLSN 61
Query: 163 PSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEKILHIGTV-DHDKYPLSRKRLPMD 218
+R C ++V GV+ + +G+ AVEL+ + + +G V D D YP++ KR ++
Sbjct: 62 YQDEVLRLTAGCSVIVTGVIVESPAEGQ-AVELQAKSVEVVGWVEDPDTYPMAAKRHSIE 120
Query: 219 MLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQV 278
LR+ AH RPRT + +V R+R L A H FF GF +V P+I
Sbjct: 121 YLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPLI-------------- 166
Query: 279 TTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKT 338
TA D EG ++ + S + +E L R E
Sbjct: 167 -------------TASDTEGAG-EMFRVSTLD----LENLPRGEDG-------------- 194
Query: 339 NELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGP 398
KV+FS+DFF R+++LTVSG+L+ E+YACAL VY+FGP
Sbjct: 195 ----------------------KVDFSQDFFGRESFLTVSGQLNGETYACALSKVYTFGP 232
Query: 399 RFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKR 458
FRAE +++H AE MVE E AF+ L D K A+D K++ + +LE+ DL+F K
Sbjct: 233 TFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFRAVLEERKDDLKFFEKH 292
Query: 459 IDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIY 518
ID T I RL++ I+S F +I YT+A++ L K + K FE +EWG+ L++EH +LA+E +
Sbjct: 293 IDNTVISRLENFINSDFAQIDYTDAIEVLLK-SGKNFEFPVEWGIDLSSEHERFLAEEYF 351
Query: 519 KRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKEL 578
K PV+V NYPK +K FY+RLNDDG TVAA D++ P G +I GSQ EER+++L+ R+ E+
Sbjct: 352 KSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEVLDKRMVEM 411
Query: 579 GLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
GL E Y WY DLRR+GTV HSGF GF+ ++++ TGL ++R+ IPFPR+
Sbjct: 412 GLNPEDYWWYRDLRRYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRA 461
>sp|O48593|SYNO_ARATH Asparagine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=SYNO PE=2 SV=3
Length = 567
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/501 (38%), Positives = 289/501 (57%), Gaps = 66/501 (13%)
Query: 137 STVFLQVSDGSCVASLQVVVESTLVSPSKIRPIGTCLMVEGVLKQPSV---QG-KHAVEL 192
S F++++DGSC+++LQ V+ S ++ G+ L V Q ++ QG K VEL
Sbjct: 126 SVTFIEINDGSCLSNLQCVMTSDAEGYDQVES-GSILTGASVSVQGTIVASQGTKQKVEL 184
Query: 193 KVEKILHIGTVDHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQ 252
KVEKI+ +G D YP+ +KR+ + LR AH RPRT T +V R+R++L +ATH FFQ
Sbjct: 185 KVEKIIVVGECDS-SYPIQKKRVSREFLRTKAHLRPRTNTFGAVARVRNTLAYATHKFFQ 243
Query: 253 NHGFLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKS 312
GF++V P+IT A D EG ++
Sbjct: 244 ESGFVWVASPIIT---------------------------ASDCEGAGEQFCVTTL---- 272
Query: 313 NKVEELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQ 372
+ S N + I A+ P K +++S+DFF +
Sbjct: 273 -----IPSSHENTDTSIDAI----------------------PKTKGGLIDWSQDFFGKP 305
Query: 373 TYLTVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKC 432
+LTVSG+L+ E+YA AL +VY+FGP FRAE +S+H AE M+E E+AF+ L+D M C
Sbjct: 306 AFLTVSGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLDDDMAC 365
Query: 433 ADDYFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTE 492
A Y +++ K++L++C +D+EF I+ I RL V F ++ YT+A++ L K +
Sbjct: 366 ATAYLQYVVKYVLDNCKEDMEFFDTWIEKGIIRRLSDVAEKEFLQLGYTDAIEILLKANK 425
Query: 493 KIFETKLEWGVALTAEHLSYLADEIYK-RPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMV 551
K F+ ++WG+ L +EH Y+ +E + RPVI+ +YPK +K FY+R NDDG TVAA DM+
Sbjct: 426 K-FDFPVKWGLDLQSEHERYITEEAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDML 484
Query: 552 VPKGGTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVL 611
VP+ G +I GSQ EER+++L R+ EL L +E Y WYLDLRR+G+V H+GF GF+ +V
Sbjct: 485 VPRIGELIGGSQREERLEVLEARLDELKLNKESYWWYLDLRRYGSVPHAGFGLGFERLVQ 544
Query: 612 FTTGLTDVRDAIPFPRSLGKA 632
F TG+ ++RD IPFPR+ A
Sbjct: 545 FVTGIDNIRDVIPFPRTPASA 565
>sp|B0BNV4|SYN_ACTPJ Asparagine--tRNA ligase OS=Actinobacillus pleuropneumoniae serotype
3 (strain JL03) GN=asnS PE=3 SV=1
Length = 467
Score = 360 bits (925), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/530 (37%), Positives = 293/530 (55%), Gaps = 76/530 (14%)
Query: 103 FRTIIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVS 162
F T+ +L G + V +R + + FL V DGSC LQ ++ + L +
Sbjct: 4 FPTVSEILSGKVAVGEEVAVRGWVRTR--RDSKAGLSFLAVYDGSCFDPLQSIINNDLAN 61
Query: 163 PSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEKILHIGTV-DHDKYPLSRKRLPMD 218
+ +R C ++V G + + +G+ AVEL + +G V D D YP++ KR ++
Sbjct: 62 YNDEVLRLTAGCSVIVTGKVVESPAEGQ-AVELHATHVEVVGWVEDPDTYPMAAKRHSIE 120
Query: 219 MLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQV 278
LR+ AH RPRT + +V R+R L A H FF GF +V P+I
Sbjct: 121 YLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLI-------------- 166
Query: 279 TTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKT 338
TA D EG E + S + E+L
Sbjct: 167 -------------TASDTEGAG---------------EMFRVSTLDLESL---------- 188
Query: 339 NELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGP 398
P KV+FS+DFF ++++LTVSG+L+ E+YACAL VY+FGP
Sbjct: 189 ----------------PRTDEGKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGP 232
Query: 399 RFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKR 458
FRAE +++H AE MVE E AF+ L D K A+D K++ K +LE+ D++F +K
Sbjct: 233 TFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKH 292
Query: 459 IDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIY 518
ID I RL++ I+S F ++ YT+A++ L K + K FE + WG+ L++EH +LA+E +
Sbjct: 293 IDKDVITRLENFIASPFAQVDYTDAIEILLK-SGKEFEFPVSWGIDLSSEHERFLAEEYF 351
Query: 519 KRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKEL 578
K PV+V NYPK +K FY+RLNDDG TVAA D++ P G +I GSQ EER+D+L+TR+ E+
Sbjct: 352 KSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDTRMVEM 411
Query: 579 GLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
GL E Y WY DLR++GTV HSGF GF+ ++++ TGL ++R+ IPFPR+
Sbjct: 412 GLNPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRA 461
>sp|Q633N6|SYN_BACCZ Asparagine--tRNA ligase OS=Bacillus cereus (strain ZK / E33L)
GN=asnS PE=3 SV=1
Length = 463
Score = 360 bits (925), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/496 (39%), Positives = 281/496 (56%), Gaps = 75/496 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSKIR--PIGTCLMVEG-VLKQPSVQGKHAVELKVEK 196
F++++DGS S+Q+V ++ L + +I P+ + + VEG V+ P K E+K EK
Sbjct: 38 FIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVEGKVIATPGA--KQPFEIKAEK 95
Query: 197 ILHIGTVDHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGF 256
I G D D YPL +KR + LR AH RPRT ++ R+RS A H FFQ GF
Sbjct: 96 IDIEGLSDSD-YPLQKKRHTFEYLRTIAHLRPRTNAFSATFRVRSIAAFAIHQFFQERGF 154
Query: 257 LYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVE 316
++V P+I T D EG
Sbjct: 155 VHVHTPII---------------------------TGSDTEGAG---------------- 171
Query: 317 ELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLT 376
E QDL P + +V+ S+DFF ++T LT
Sbjct: 172 ---------EMFRVTTQDLN----------------NVPKGEDGQVDESKDFFGKETNLT 206
Query: 377 VSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDY 436
VSG+L+ E+YA A +VY+FGP FRAE +++HAAE MVE EIAF++L D M +D
Sbjct: 207 VSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMVEPEIAFAELGDVMNLTEDM 266
Query: 437 FKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFE 496
K+ K++LE +++EF + +D T ++R+ +VI+S F +ITYTEA+K L++ + F+
Sbjct: 267 LKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQE-SGADFK 325
Query: 497 TKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGG 556
+EWG+ L EH YL++EI+KRPV V +YPK +K FY+RLNDDG TVAA D++VP G
Sbjct: 326 YPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGIG 385
Query: 557 TVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGL 616
+I GSQ EER+D+L RIKELG+ E Y WYL+LR++G KH+GF GF+ +++ TG+
Sbjct: 386 ELIGGSQREERMDVLVDRIKELGMNEEDYWWYLELRKYGGTKHAGFGLGFERFLMYITGM 445
Query: 617 TDVRDAIPFPRSLGKA 632
++RD IPFPR+ G +
Sbjct: 446 ANIRDVIPFPRTPGSS 461
>sp|Q81L32|SYN_BACAN Asparagine--tRNA ligase OS=Bacillus anthracis GN=asnS PE=3 SV=1
Length = 463
Score = 360 bits (925), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/496 (39%), Positives = 281/496 (56%), Gaps = 75/496 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSKIR--PIGTCLMVEG-VLKQPSVQGKHAVELKVEK 196
F++++DGS S+Q+V ++ L + +I P+ + + VEG V+ P K E+K EK
Sbjct: 38 FIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVEGKVIATPGA--KQPFEIKAEK 95
Query: 197 ILHIGTVDHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGF 256
I G D D YPL +KR + LR AH RPRT ++ R+RS A H FFQ GF
Sbjct: 96 IDIEGLSDSD-YPLQKKRHTFEYLRTIAHLRPRTNAFSATFRVRSIAAFAIHQFFQERGF 154
Query: 257 LYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVE 316
++V P+I T D EG
Sbjct: 155 VHVHTPII---------------------------TGSDTEGAG---------------- 171
Query: 317 ELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLT 376
E QDL P + +V+ S+DFF ++T LT
Sbjct: 172 ---------EMFRVTTQDLN----------------NVPKGEDGQVDESKDFFGKETNLT 206
Query: 377 VSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDY 436
VSG+L+ E+YA A +VY+FGP FRAE +++HAAE MVE EIAF++L D M +D
Sbjct: 207 VSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMVEPEIAFAELGDVMNLTEDM 266
Query: 437 FKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFE 496
K+ K++LE +++EF + +D T ++R+ +VI+S F +ITYTEA+K L++ + F+
Sbjct: 267 LKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQE-SGADFK 325
Query: 497 TKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGG 556
+EWG+ L EH YL++EI+KRPV V +YPK +K FY+RLNDDG TVAA D++VP G
Sbjct: 326 YPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGIG 385
Query: 557 TVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGL 616
+I GSQ EER+D+L RIKELG+ E Y WYL+LR++G KH+GF GF+ +++ TG+
Sbjct: 386 ELIGGSQREERMDVLVDRIKELGMNEEDYWWYLELRKYGGTKHAGFGLGFERFLMYITGM 445
Query: 617 TDVRDAIPFPRSLGKA 632
++RD IPFPR+ G +
Sbjct: 446 ANIRDVIPFPRTPGSS 461
>sp|Q6HCW9|SYN_BACHK Asparagine--tRNA ligase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=asnS PE=3 SV=1
Length = 463
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/496 (39%), Positives = 281/496 (56%), Gaps = 75/496 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSKIR--PIGTCLMVEG-VLKQPSVQGKHAVELKVEK 196
F++++DGS S+Q+V ++ L + +I P+ + + VEG V+ P K E+K EK
Sbjct: 38 FIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVEGKVIATPG--AKQPFEIKAEK 95
Query: 197 ILHIGTVDHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGF 256
I G D D YPL +KR + LR AH RPRT ++ R+RS A H FFQ GF
Sbjct: 96 IDIEGLSDSD-YPLQKKRHTFEYLRTIAHLRPRTNAFSATFRVRSIAAFAIHQFFQERGF 154
Query: 257 LYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVE 316
++V P+I T D EG
Sbjct: 155 VHVHTPII---------------------------TGSDTEGAG---------------- 171
Query: 317 ELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLT 376
E QDL P + +V+ S+DFF ++T LT
Sbjct: 172 ---------EMFRVTTQDLN----------------NVPKDEDGQVDESKDFFGKETNLT 206
Query: 377 VSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDY 436
VSG+L+ E+YA A +VY+FGP FRAE +++HAAE MVE EIAF++L D M +D
Sbjct: 207 VSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMVEPEIAFAELGDVMNLTEDM 266
Query: 437 FKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFE 496
K+ K++LE +++EF + +D T ++R+ +VI+S F +ITYTEA+K L++ + F+
Sbjct: 267 LKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQE-SGADFK 325
Query: 497 TKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGG 556
+EWG+ L EH YL++EI+KRPV V +YPK +K FY+RLNDDG TVAA D++VP G
Sbjct: 326 YPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGIG 385
Query: 557 TVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGL 616
+I GSQ EER+D+L RIKELG+ E Y WYL+LR++G KH+GF GF+ +++ TG+
Sbjct: 386 ELIGGSQREERMDVLVDRIKELGMNEEDYWWYLELRKYGGTKHAGFGLGFERFLMYITGM 445
Query: 617 TDVRDAIPFPRSLGKA 632
++RD IPFPR+ G +
Sbjct: 446 ANIRDVIPFPRTPGSS 461
>sp|Q72ZI3|SYN_BACC1 Asparagine--tRNA ligase OS=Bacillus cereus (strain ATCC 10987)
GN=asnS PE=3 SV=1
Length = 463
Score = 360 bits (923), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/496 (39%), Positives = 281/496 (56%), Gaps = 75/496 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSKIR--PIGTCLMVEG-VLKQPSVQGKHAVELKVEK 196
F++++DGS S+Q+V ++ L + +I P+ + + VEG V+ P K E+K EK
Sbjct: 38 FIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVEGKVIVTPGA--KQPFEIKAEK 95
Query: 197 ILHIGTVDHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGF 256
I G D D YPL +KR + LR AH RPRT ++ R+RS A H FFQ GF
Sbjct: 96 IDIEGLSDSD-YPLQKKRHTFEYLRTIAHLRPRTNAFSATFRVRSIAAFAIHQFFQERGF 154
Query: 257 LYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVE 316
++V P+I T D EG
Sbjct: 155 VHVHTPII---------------------------TGSDTEGAG---------------- 171
Query: 317 ELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLT 376
E QDL P + +V+ S+DFF ++T LT
Sbjct: 172 ---------EMFRVTTQDLN----------------NVPKGEDGQVDESKDFFGKETNLT 206
Query: 377 VSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDY 436
VSG+L+ E+YA A +VY+FGP FRAE +++HAAE MVE EIAF++L D M +D
Sbjct: 207 VSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMVEPEIAFAELGDVMNLTEDM 266
Query: 437 FKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFE 496
K+ K++LE +++EF + +D T ++R+ +VI+S F +ITYTEA+K L++ + F+
Sbjct: 267 LKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQE-SGADFK 325
Query: 497 TKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGG 556
+EWG+ L EH YL++EI+KRPV V +YPK +K FY+RLNDDG TVAA D++VP G
Sbjct: 326 YPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGIG 385
Query: 557 TVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGL 616
+I GSQ EER+D+L RIKELG+ E Y WYL+LR++G KH+GF GF+ +++ TG+
Sbjct: 386 ELIGGSQREERMDVLVDRIKELGMNEEDYWWYLELRKYGGTKHAGFGLGFERFLMYITGM 445
Query: 617 TDVRDAIPFPRSLGKA 632
++RD IPFPR+ G +
Sbjct: 446 ANIRDVIPFPRTPGSS 461
>sp|Q817I8|SYN_BACCR Asparagine--tRNA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=asnS PE=3 SV=1
Length = 463
Score = 360 bits (923), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 197/496 (39%), Positives = 283/496 (57%), Gaps = 75/496 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSKIR--PIGTCLMVEG-VLKQPSVQGKHAVELKVEK 196
F++++DGS S+Q+V ++ L + +I P+ + + VEG V+ P K E+K EK
Sbjct: 38 FIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVEGKVIATPG--AKQPFEIKAEK 95
Query: 197 ILHIGTVDHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGF 256
I G D D YPL +KR + LR AH RPRT ++ R+RS A H FFQ GF
Sbjct: 96 IDIEGLSDSD-YPLQKKRHTFEYLRTIAHLRPRTNAFSATFRVRSIAAFAIHQFFQERGF 154
Query: 257 LYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVE 316
++V P+I T D EG
Sbjct: 155 VHVHTPII---------------------------TGSDTEGAG---------------- 171
Query: 317 ELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLT 376
E QDL N L P + KV+ S+DFF ++T LT
Sbjct: 172 ---------EMFRVTTQDL---NNL-------------PKGEDGKVDESKDFFGKETNLT 206
Query: 377 VSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDY 436
VSG+L+ E+YA A +VY+FGP FRAE +++HAAE MVE EIAF++L D M +D
Sbjct: 207 VSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMVEPEIAFAELGDVMNLTEDM 266
Query: 437 FKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFE 496
K+ K++LE +++EF + +D T ++R+ +VI+S F +ITYTEA+K L++ + F+
Sbjct: 267 LKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQE-SGADFK 325
Query: 497 TKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGG 556
+EWG+ L EH YL++EI+KRPV V +YPK +K FY+RLN+DG TVAA D++VP G
Sbjct: 326 YPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDIKAFYMRLNEDGKTVAATDLLVPGIG 385
Query: 557 TVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGL 616
+I GSQ EER+D+L RIKELG+ E Y WYL+LR++G KH+GF GF+ +++ TG+
Sbjct: 386 ELIGGSQREERMDVLVDRIKELGMNEEDYWWYLELRKYGGTKHAGFGLGFERFLMYITGM 445
Query: 617 TDVRDAIPFPRSLGKA 632
++RD IPFPR+ G +
Sbjct: 446 ANIRDVIPFPRTPGSS 461
>sp|B3H198|SYN_ACTP7 Asparagine--tRNA ligase OS=Actinobacillus pleuropneumoniae serotype
7 (strain AP76) GN=asnS PE=3 SV=1
Length = 467
Score = 359 bits (921), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 198/530 (37%), Positives = 296/530 (55%), Gaps = 76/530 (14%)
Query: 103 FRTIIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVS 162
F T+ +L G + V +R + + FL V DGSC +Q ++ + L +
Sbjct: 4 FPTVSEILSGKVAVGEEVAVRGWVRTR--RDSKAGLSFLAVYDGSCFDPIQSIINNDLAN 61
Query: 163 PSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEKILHIGTV-DHDKYPLSRKRLPMD 218
+ +R C ++V G + + +G+ AVEL + +G V D D YP++ KR ++
Sbjct: 62 YNDEVLRLTAGCSVIVTGKVVESPAEGQ-AVELHATHVEVVGWVEDPDTYPMAAKRHSIE 120
Query: 219 MLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQV 278
LR+ AH RPRT + +V R+R L A H FF GF +V P+I
Sbjct: 121 YLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLI-------------- 166
Query: 279 TTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKT 338
TA D EG ++ + S + +E L R+E
Sbjct: 167 -------------TASDTEGAG-EMFRVSTLD----LENLPRTEEG-------------- 194
Query: 339 NELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGP 398
KV+FS+DFF ++++LTVSG+L+ E+YACAL VY+FGP
Sbjct: 195 ----------------------KVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGP 232
Query: 399 RFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKR 458
FRAE +++H AE MVE E AF+ L D K A+D K++ K +LE+ D++F +K
Sbjct: 233 TFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKH 292
Query: 459 IDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIY 518
ID I RL++ I++ F ++ YT+A++ L K + K FE + WG+ L++EH +LA+E +
Sbjct: 293 IDKDVITRLENFIAAPFAQVDYTDAIEILLK-SGKEFEFPVSWGIDLSSEHERFLAEEYF 351
Query: 519 KRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKEL 578
K PV+V NYPK +K FY+RLNDDG TVAA D++ P G +I GSQ EER+D+L+TR+ E+
Sbjct: 352 KSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDTRMVEM 411
Query: 579 GLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
GL E Y WY DLR++GTV HSGF GF+ ++++ TGL ++R+ IPFPR+
Sbjct: 412 GLNPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRA 461
>sp|A3N039|SYN_ACTP2 Asparagine--tRNA ligase OS=Actinobacillus pleuropneumoniae serotype
5b (strain L20) GN=asnS PE=3 SV=1
Length = 467
Score = 359 bits (921), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 198/530 (37%), Positives = 296/530 (55%), Gaps = 76/530 (14%)
Query: 103 FRTIIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVS 162
F T+ +L G + V +R + + FL V DGSC +Q ++ + L +
Sbjct: 4 FPTVSEILSGKVAVGEEVAVRGWVRTR--RDSKAGLSFLAVYDGSCFDPIQSIINNDLAN 61
Query: 163 PSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEKILHIGTV-DHDKYPLSRKRLPMD 218
+ +R C ++V G + + +G+ AVEL + +G V D D YP++ KR ++
Sbjct: 62 YNDEVLRLTAGCSVIVTGKVVESPAEGQ-AVELHATHVEVVGWVEDPDTYPMAAKRHSIE 120
Query: 219 MLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQV 278
LR+ AH RPRT + +V R+R L A H FF GF +V P+I
Sbjct: 121 YLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLI-------------- 166
Query: 279 TTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKT 338
TA D EG ++ + S + +E L R+E
Sbjct: 167 -------------TASDTEGAG-EMFRVSTLD----LENLPRTEEG-------------- 194
Query: 339 NELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGP 398
KV+FS+DFF ++++LTVSG+L+ E+YACAL VY+FGP
Sbjct: 195 ----------------------KVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGP 232
Query: 399 RFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKR 458
FRAE +++H AE MVE E AF+ L D K A+D K++ K +LE+ D++F +K
Sbjct: 233 TFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKH 292
Query: 459 IDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIY 518
ID I RL++ I++ F ++ YT+A++ L K + K FE + WG+ L++EH +LA+E +
Sbjct: 293 IDKDVITRLENFIAAPFAQVDYTDAIEILLK-SGKEFEFPVSWGIDLSSEHERFLAEEYF 351
Query: 519 KRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKEL 578
K PV+V NYPK +K FY+RLNDDG TVAA D++ P G +I GSQ EER+D+L+TR+ E+
Sbjct: 352 KSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDTRMVEM 411
Query: 579 GLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
GL E Y WY DLR++GTV HSGF GF+ ++++ TGL ++R+ IPFPR+
Sbjct: 412 GLNPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRA 461
>sp|A5UF16|SYN_HAEIG Asparagine--tRNA ligase OS=Haemophilus influenzae (strain PittGG)
GN=asnS PE=3 SV=1
Length = 467
Score = 357 bits (916), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/528 (37%), Positives = 299/528 (56%), Gaps = 76/528 (14%)
Query: 105 TIIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVS-P 163
+I+ VL G I V +R + + FL V DGSC +Q ++ + + +
Sbjct: 6 SIVDVLQGKVAIGETVTVRGWVRT--RRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYE 63
Query: 164 SKIRPI--GTCLMVEGVLKQPSVQGKHAVELKVEKILHIGTV-DHDKYPLSRKRLPMDML 220
S+I + G ++V G + + +G+ AVEL+ EK+ G V D D YP++ KR ++ L
Sbjct: 64 SEILRLTTGCSVIVTGKVVESPAEGQ-AVELQAEKVEVTGFVEDPDTYPMAAKRHSIEYL 122
Query: 221 RDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVTT 280
R+ AH RPRT + +V R+R L+ A H FF GF +V P+I
Sbjct: 123 REVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLI---------------- 166
Query: 281 LFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTNE 340
TA D EG ++ + S + +E L RSE+
Sbjct: 167 -----------TASDTEGAG-EMFRVSTLD----LENLPRSENG---------------- 194
Query: 341 LVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPRF 400
KV+FS+DFF ++++LTVSG+L+ E+YACAL +Y+FGP F
Sbjct: 195 --------------------KVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTF 234
Query: 401 RAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRID 460
RAE +++H AE MVE E+AF+ L D K A+D K++ + +L + DL+F K +D
Sbjct: 235 RAENSNTTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVD 294
Query: 461 MTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYKR 520
I RL++ ++S F +I YT+A+ L K +K FE + WG+ L++EH +LA+E +K
Sbjct: 295 KDVITRLENFVNSDFAQIDYTDAIDVLLKSGKK-FEFPVSWGIDLSSEHERFLAEEYFKS 353
Query: 521 PVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELGL 580
PV+V NYPK +K FY+RLNDDG TVAA D++ P G +I GSQ EER+++L+ R++E+GL
Sbjct: 354 PVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEVLDKRMEEMGL 413
Query: 581 PREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
+ Y WY DLR++G+V HSGF GF+ ++++ TG+ ++RD IPFPR+
Sbjct: 414 NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRA 461
>sp|A5UCB9|SYN_HAEIE Asparagine--tRNA ligase OS=Haemophilus influenzae (strain PittEE)
GN=asnS PE=3 SV=1
Length = 467
Score = 356 bits (913), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 196/528 (37%), Positives = 299/528 (56%), Gaps = 76/528 (14%)
Query: 105 TIIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVS-P 163
+I+ VL G I V +R + + FL V DGSC +Q ++ + + +
Sbjct: 6 SIVDVLQGKVAIGETVTVRGWVRT--RRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYE 63
Query: 164 SKIRPI--GTCLMVEGVLKQPSVQGKHAVELKVEKILHIGTV-DHDKYPLSRKRLPMDML 220
S+I + G ++V G + + +G+ AVEL+ EK+ G V D D YP++ KR ++ L
Sbjct: 64 SEILRLTTGCSVIVTGKVVESPSEGQ-AVELQAEKVEVTGFVEDPDTYPMAAKRHSIEYL 122
Query: 221 RDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVTT 280
R+ AH RPRT + +V R+R L+ A H FF GF +V P+I
Sbjct: 123 REVAHLRPRTNIIGAVSRVRHCLSQAIHRFFHEQGFYWVATPLI---------------- 166
Query: 281 LFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTNE 340
TA D EG ++ + S + +E L RSE+
Sbjct: 167 -----------TASDTEGAG-EMFRVSTLD----LENLPRSENG---------------- 194
Query: 341 LVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPRF 400
KV+FS+DFF ++++LTVSG+L+ E+YACAL +Y+FGP F
Sbjct: 195 --------------------KVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTF 234
Query: 401 RAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRID 460
RAE +++H AE MVE E+AF+ L D K A+D K++ + +L + DL+F K +D
Sbjct: 235 RAENSNTTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVD 294
Query: 461 MTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYKR 520
I RL++ ++S F +I YT+A+ L K +K FE + WG+ L++EH +LA+E +K
Sbjct: 295 KDVITRLENFVNSDFAQIDYTDAIDVLLKSGKK-FEFPVSWGIDLSSEHERFLAEEYFKS 353
Query: 521 PVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELGL 580
PV+V NYPK +K FY+RLNDDG TVAA D++ P G +I GSQ EER+++L+ R++E+GL
Sbjct: 354 PVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEVLDKRMEEMGL 413
Query: 581 PREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
+ Y WY DLR++G+V HSGF GF+ ++++ TG+ ++RD IPFPR+
Sbjct: 414 NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRA 461
>sp|A6T726|SYN_KLEP7 Asparagine--tRNA ligase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=asnS PE=3 SV=1
Length = 466
Score = 355 bits (910), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 190/493 (38%), Positives = 282/493 (57%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q V+ ++L + ++ +R C ++V G + QG+ + E++
Sbjct: 38 FLAVYDGSCFDPVQAVINNSLPNYNQEVLRLTTGCSVIVTGKVVASQGQGQ-SFEIQATS 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF G
Sbjct: 97 VEVTGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQG 156
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F +V P+I TA D EG ++ + S + +
Sbjct: 157 FFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD----L 184
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E L R++ KV+F +DFF ++++L
Sbjct: 185 ENLPRNDQG------------------------------------KVDFDKDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDVAGLAEA 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K++ K +LE+ + D++F ++R+D IDRLQ I++ F ++ YT+AV LE K F
Sbjct: 269 MLKYVFKAVLEERADDMQFFAERVDKDAIDRLQRFITADFAQVDYTDAVTILENCG-KQF 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 ENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ + TG
Sbjct: 388 GEIIGGSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTG 447
Query: 616 LTDVRDAIPFPRS 628
+ +VRD IPFPR+
Sbjct: 448 VQNVRDVIPFPRT 460
>sp|Q56112|SYN_SALTI Asparagine--tRNA ligase OS=Salmonella typhi GN=asnS PE=3 SV=3
Length = 466
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/495 (38%), Positives = 283/495 (57%), Gaps = 78/495 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSKIRPI-----GTCLMVEGVLKQPSVQGKHAVELKV 194
FL V DGSC +Q V+ ++L P+ + G ++V G + QG+ + E++
Sbjct: 38 FLAVYDGSCFDPVQAVINNSL--PNYNEEVLHLTTGCSVVVTGKVVASPGQGQ-SFEIQA 94
Query: 195 EKILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQN 253
K+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF
Sbjct: 95 TKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDE 154
Query: 254 HGFLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSN 313
GF +V P+I TA D EG ++ + S +
Sbjct: 155 QGFFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD--- 183
Query: 314 KVEELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQT 373
+E L R++ R V+F +DFF +++
Sbjct: 184 -LENLPRNDQGR------------------------------------VDFDKDFFGKES 206
Query: 374 YLTVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCA 433
+LTVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ LED + A
Sbjct: 207 FLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFADLEDNARLA 266
Query: 434 DDYFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEK 493
+ K++ K +LE+ + D++F ++R+D I RL+ +S+ F ++ YT+AV LE+ K
Sbjct: 267 EAMLKYVFKAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTDAVAILERCG-K 325
Query: 494 IFETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVP 553
FE + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 326 TFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEIKAFYMRLNEDGKTVAAMDVLAP 385
Query: 554 KGGTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFT 613
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ +
Sbjct: 386 GIGEIIGGSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYV 445
Query: 614 TGLTDVRDAIPFPRS 628
TG+ +VRD IPFPR+
Sbjct: 446 TGVQNVRDVIPFPRT 460
>sp|Q5PGF0|SYN_SALPA Asparagine--tRNA ligase OS=Salmonella paratyphi A (strain ATCC 9150
/ SARB42) GN=asnS PE=3 SV=1
Length = 466
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/495 (38%), Positives = 283/495 (57%), Gaps = 78/495 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSKIRPI-----GTCLMVEGVLKQPSVQGKHAVELKV 194
FL V DGSC +Q V+ ++L P+ + G ++V G + QG+ + E++
Sbjct: 38 FLAVYDGSCFDPVQAVINNSL--PNYNEEVLHLTTGCSVVVTGKVVASPGQGQ-SFEIQA 94
Query: 195 EKILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQN 253
K+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF
Sbjct: 95 TKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDE 154
Query: 254 HGFLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSN 313
GF +V P+I TA D EG ++ + S +
Sbjct: 155 QGFFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD--- 183
Query: 314 KVEELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQT 373
+E L R++ R V+F +DFF +++
Sbjct: 184 -LENLPRNDQGR------------------------------------VDFDKDFFGKES 206
Query: 374 YLTVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCA 433
+LTVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ LED + A
Sbjct: 207 FLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFADLEDNARLA 266
Query: 434 DDYFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEK 493
+ K++ K +LE+ + D++F ++R+D I RL+ +S+ F ++ YT+AV LE+ K
Sbjct: 267 EAMLKYVFKAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTDAVAILERCG-K 325
Query: 494 IFETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVP 553
FE + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 326 TFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEIKAFYMRLNEDGKTVAAMDVLAP 385
Query: 554 KGGTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFT 613
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ +
Sbjct: 386 GIGEIIGGSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYV 445
Query: 614 TGLTDVRDAIPFPRS 628
TG+ +VRD IPFPR+
Sbjct: 446 TGVQNVRDVIPFPRT 460
>sp|Q57QZ8|SYN_SALCH Asparagine--tRNA ligase OS=Salmonella choleraesuis (strain SC-B67)
GN=asnS PE=3 SV=1
Length = 466
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/495 (38%), Positives = 282/495 (56%), Gaps = 78/495 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSKIRPI-----GTCLMVEGVLKQPSVQGKHAVELKV 194
FL V DGSC +Q V+ ++L P+ + G ++V G + QG+ + E++
Sbjct: 38 FLAVYDGSCFDPVQAVINNSL--PNYNEEVLHLTTGCSVVVTGKVVASPGQGQ-SFEIQA 94
Query: 195 EKILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQN 253
K+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF
Sbjct: 95 TKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDE 154
Query: 254 HGFLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSN 313
GF +V P+I TA D EG ++ + S +
Sbjct: 155 QGFFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD--- 183
Query: 314 KVEELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQT 373
+E L R++ R V+F +DFF +++
Sbjct: 184 -LENLPRNDQGR------------------------------------VDFDKDFFGKES 206
Query: 374 YLTVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCA 433
+LTVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ LED + A
Sbjct: 207 FLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFADLEDNARLA 266
Query: 434 DDYFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEK 493
+ K++ +LE+ + D++F ++R+D I RL+ +S+ F ++ YTEAV LE+ K
Sbjct: 267 EAMLKYVFNAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTEAVAILERCG-K 325
Query: 494 IFETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVP 553
FE + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 326 TFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEIKAFYMRLNEDGKTVAAMDVLAP 385
Query: 554 KGGTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFT 613
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ +
Sbjct: 386 GIGEIIGGSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYV 445
Query: 614 TGLTDVRDAIPFPRS 628
TG+ +VRD IPFPR+
Sbjct: 446 TGVQNVRDVIPFPRT 460
>sp|P43829|SYN_HAEIN Asparagine--tRNA ligase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=asnS PE=3 SV=2
Length = 467
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 195/528 (36%), Positives = 298/528 (56%), Gaps = 76/528 (14%)
Query: 105 TIIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVS-P 163
+I+ VL G I V +R + + FL V DGSC +Q ++ + + +
Sbjct: 6 SIVDVLQGKVAIGETVTVRGWVRT--RRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYE 63
Query: 164 SKIRPI--GTCLMVEGVLKQPSVQGKHAVELKVEKILHIGTV-DHDKYPLSRKRLPMDML 220
S+I + G ++V G + + +G+ AVEL+ EK+ G V D D YP++ KR ++ L
Sbjct: 64 SEILRLTTGCSVIVTGKVVESPAEGQ-AVELQAEKVEVTGFVEDPDTYPMAAKRHSIEYL 122
Query: 221 RDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVTT 280
R+ AH RPRT + +V R+R L+ A H FF GF +V P+I
Sbjct: 123 REVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLI---------------- 166
Query: 281 LFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTNE 340
TA D EG ++ + S + +E L RSE+
Sbjct: 167 -----------TASDTEGAG-EMFRVSTLD----LENLPRSENG---------------- 194
Query: 341 LVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPRF 400
KV+FS+DFF ++++LTVSG+L+ E+YACAL +Y+FGP F
Sbjct: 195 --------------------KVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTF 234
Query: 401 RAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRID 460
RAE +++H AE MVE E+AF+ L D K A+D K++ + +L + DL+F K +D
Sbjct: 235 RAENSNTTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVD 294
Query: 461 MTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYKR 520
I RL++ ++S F +I YT+A+ L K +K FE + WG+ L++EH +LA+E +K
Sbjct: 295 KDVITRLENFVNSDFAQIDYTDAIDVLLKSGKK-FEFPVSWGIDLSSEHERFLAEEYFKS 353
Query: 521 PVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELGL 580
PV+V NYPK +K FY+RLNDD TVAA D++ P G +I GSQ EER+++L+ R++E+GL
Sbjct: 354 PVVVKNYPKDIKAFYMRLNDDEKTVAAMDVLAPGIGEIIGGSQREERLEVLDKRMEEMGL 413
Query: 581 PREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
+ Y WY DLR++G+V HSGF GF+ ++++ TG+ ++RD IPFPR+
Sbjct: 414 NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRA 461
>sp|Q6LPQ6|SYN_PHOPR Asparagine--tRNA ligase OS=Photobacterium profundum GN=asnS PE=3
SV=1
Length = 466
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 189/530 (35%), Positives = 290/530 (54%), Gaps = 76/530 (14%)
Query: 103 FRTIIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVS 162
+ + VL G + + V +R + + + FL + DGSC +Q VV + L +
Sbjct: 3 YAPVTDVLSGKLAVDSEVTVRGWIRSR--RDSKAGISFLAIYDGSCFDPIQAVVPNELNN 60
Query: 163 PSK---IRPIGTCLMVEGVLKQPSVQGKHAVELKVEKILHIGTV-DHDKYPLSRKRLPMD 218
+ G + V G + + +G+ EL ++ +G V D D YP+++ R ++
Sbjct: 61 YQEEVLKLTTGCSVEVTGKIVESPAKGQD-FELAATEVKVVGLVEDPDTYPMAKTRHSIE 119
Query: 219 MLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQV 278
LR+ AH RPRT + +V R+R+ L+ A H F+ GF ++ P+I
Sbjct: 120 YLREVAHLRPRTNIIGAVARVRNCLSQAIHRFYHEQGFFWMSAPLI-------------- 165
Query: 279 TTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKT 338
TA D EG ++ + S + +N
Sbjct: 166 -------------TASDCEGAG-EMFRVSTLDMAN------------------------- 186
Query: 339 NELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGP 398
P +V++ +DFF ++T+LTVSG+L+ E+YACAL VY+FGP
Sbjct: 187 ---------------VPMTDAGEVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGP 231
Query: 399 RFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKR 458
FRAE +S+H AE MVE E+AF+ L+DA K A+D K++ K +LE+ DLEF ++R
Sbjct: 232 TFRAENSNTSRHLAEFWMVEPEVAFADLDDAAKLAEDMLKYVFKAVLEERRDDLEFFAQR 291
Query: 459 IDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIY 518
I+ I RL+ ++S F ++ YT+A++ L+ K FE +EWG+ +++EH YLA+E +
Sbjct: 292 INKEAITRLEQFVTSDFAQVDYTDAIQILQDSGRK-FEFDVEWGIDMSSEHERYLAEEHF 350
Query: 519 KRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKEL 578
K PV+V NYPK +K FY+R+NDDG TVAA D++ P G +I GSQ EER++ L+ RI E+
Sbjct: 351 KAPVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQREERLEHLDKRIAEM 410
Query: 579 GLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
G+ EWY DLRR+GTV HSGF GF+ +V + TG+ ++RD IPFPR+
Sbjct: 411 GIDASHIEWYRDLRRYGTVPHSGFGLGFERLVTYVTGMQNIRDVIPFPRA 460
>sp|P58696|SYN_SALTY Asparagine--tRNA ligase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=asnS PE=3 SV=2
Length = 466
Score = 352 bits (903), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 189/495 (38%), Positives = 282/495 (56%), Gaps = 78/495 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSKIRPI-----GTCLMVEGVLKQPSVQGKHAVELKV 194
FL V DGSC +Q V+ ++L P+ + G ++V G + QG+ + E++
Sbjct: 38 FLAVYDGSCFDPVQAVINNSL--PNYNEEVLHLTTGCSVVVTGKVVASPGQGQ-SFEIQA 94
Query: 195 EKILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQN 253
K+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF
Sbjct: 95 TKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDE 154
Query: 254 HGFLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSN 313
GF +V P+I TA D EG ++ + S +
Sbjct: 155 QGFFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD--- 183
Query: 314 KVEELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQT 373
+E L R++ R V+F +DFF +++
Sbjct: 184 -LENLPRNDQGR------------------------------------VDFDKDFFGKES 206
Query: 374 YLTVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCA 433
+LTVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ LED + A
Sbjct: 207 FLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFADLEDNARLA 266
Query: 434 DDYFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEK 493
+ K++ +LE+ + D++F ++R+D I RL+ +S+ F ++ YT+AV LE+ K
Sbjct: 267 EAMLKYVFNAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTDAVAILERCG-K 325
Query: 494 IFETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVP 553
FE + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 326 TFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEIKAFYMRLNEDGKTVAAMDVLAP 385
Query: 554 KGGTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFT 613
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ +
Sbjct: 386 GIGEIIGGSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYV 445
Query: 614 TGLTDVRDAIPFPRS 628
TG+ +VRD IPFPR+
Sbjct: 446 TGVQNVRDVIPFPRT 460
>sp|Q7VLL7|SYN_HAEDU Asparagine--tRNA ligase OS=Haemophilus ducreyi (strain 35000HP /
ATCC 700724) GN=asnS PE=3 SV=1
Length = 467
Score = 351 bits (901), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 195/530 (36%), Positives = 295/530 (55%), Gaps = 76/530 (14%)
Query: 103 FRTIIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVS 162
F T+ +L G + V +R + + FL V DGSC +QV++ + L +
Sbjct: 4 FPTVSEILSGKIVVGEKVTVRGWVR--TRRDSKAGLSFLTVYDGSCFEPIQVIINNDLAN 61
Query: 163 PSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEKILHIGTVDH-DKYPLSRKRLPMD 218
+R C ++V G + + G+ AVEL+ ++ +G VD D YP++ KR ++
Sbjct: 62 YQTEILRLTAGCSVIVTGNIVESPASGQ-AVELQALEVEVVGWVDDPDTYPMAAKRHSIE 120
Query: 219 MLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQV 278
LR+ AH RPRT + +V R+R L A H FF GF +V P+I
Sbjct: 121 YLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNGQGFYWVATPLI-------------- 166
Query: 279 TTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKT 338
TA D EG ++ + S + +E L R+E
Sbjct: 167 -------------TASDTEGAG-EMFRVSTLD----LENLPRTEHG-------------- 194
Query: 339 NELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGP 398
K+++S+DFF ++ +LTVSG+L+ ESYACAL VY+FGP
Sbjct: 195 ----------------------KIDYSQDFFGKEAFLTVSGQLNGESYACALSKVYTFGP 232
Query: 399 RFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKR 458
FRAE +++H AE MVE E AF+ L D K A+D K++ K +LE+ D++F +K
Sbjct: 233 TFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKH 292
Query: 459 IDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIY 518
ID I RL++ I++ F ++ Y++A++ L K +K FE + WGV L++EH +LA+E +
Sbjct: 293 IDKEVITRLENFIAAPFAQVDYSDAIEILLKSGKK-FEFPVAWGVDLSSEHERFLAEEHF 351
Query: 519 KRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKEL 578
K PV+V NYPK +K FY+RLNDDG TVAA D++ P G +I GSQ EER+ +L++R+ E+
Sbjct: 352 KSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLAVLDSRMIEM 411
Query: 579 GLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
GL E Y WY DLR++GTV H+GF GF+ ++++ TGL ++R+ IPFPR+
Sbjct: 412 GLNPEDYWWYRDLRKYGTVPHAGFGLGFERLIVYVTGLQNIREVIPFPRA 461
>sp|A6WMP4|SYN_SHEB8 Asparagine--tRNA ligase OS=Shewanella baltica (strain OS185)
GN=asnS PE=3 SV=1
Length = 466
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 190/494 (38%), Positives = 277/494 (56%), Gaps = 76/494 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPS----KIRPIGTCLMVEGVLKQPSVQGKHAVELKVE 195
FL V DGSC +Q VV ++L + K+ + +M V++ P A EL+V
Sbjct: 38 FLAVYDGSCFNPIQGVVPNSLDNYDNEVLKLTAGCSVVMTGDVVESPG--AGQAFELQVT 95
Query: 196 KILHIGTVDH-DKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNH 254
I G VD D YP++ KR ++ LR+ AH RPRT + +V R+R+ L+ A H F+
Sbjct: 96 DIEVAGWVDDPDTYPMAAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEE 155
Query: 255 GFLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNK 314
GF++V P+I TA D EG ++ + S +
Sbjct: 156 GFIWVSTPLI---------------------------TASDCEGAG-EMFRVSTLD---- 183
Query: 315 VEELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTY 374
+E L R+E+ KV++ +DFF ++ +
Sbjct: 184 MENLPRTEAG------------------------------------KVDYDKDFFGKEAF 207
Query: 375 LTVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCAD 434
LTVSG+L+ E+YACAL VY+FGP FRAE +S+H AE MVE E+AF+ L D A+
Sbjct: 208 LTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAEFWMVEPEVAFANLNDIAGLAE 267
Query: 435 DYFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKI 494
K+ +L + DL F ++ +D T IDRLQS +SS F ++ YT+AV+ L+ +
Sbjct: 268 AMLKYAFNAVLTERMDDLTFFAQHVDKTVIDRLQSFVSSDFAQVDYTDAVEILQNCG-RT 326
Query: 495 FETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPK 554
FE + WG+ L++EH YLA+E +K PV+V NYPK +K FY+RLNDDG TVAA D++ P
Sbjct: 327 FEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPG 386
Query: 555 GGTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTT 614
G +I GSQ EER+D+L+ R+ E+ L +E Y WY D+RR+GTV H+GF GF+ +V + T
Sbjct: 387 IGEIIGGSQREERLDVLDMRLAEMDLNQEDYWWYRDMRRYGTVPHAGFGLGFERLVSYVT 446
Query: 615 GLTDVRDAIPFPRS 628
G+ ++RD IPFPR+
Sbjct: 447 GVNNIRDVIPFPRA 460
>sp|Q32E51|SYN_SHIDS Asparagine--tRNA ligase OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=asnS PE=3 SV=1
Length = 466
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 280/493 (56%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q V+ ++L + ++ +R C ++V G + QG+ E++ K
Sbjct: 38 FLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQ-FEIQASK 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF G
Sbjct: 97 VEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQG 156
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F +V P+I TA D EG ++ + S + +
Sbjct: 157 FFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD----L 184
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E L R++ KV+F +DFF ++++L
Sbjct: 185 ENLPRNDQG------------------------------------KVDFDKDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEA 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K++ K +LE+ + D++F ++R+D + RL+ I + F ++ YT+AV LE K F
Sbjct: 269 MLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRK-F 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 ENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ + TG
Sbjct: 388 GEIIGGSQREERLDVLDVRMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTG 447
Query: 616 LTDVRDAIPFPRS 628
+ +VRD IPFPR+
Sbjct: 448 VQNVRDVIPFPRT 460
>sp|Q6D453|SYN_ERWCT Asparagine--tRNA ligase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=asnS PE=3 SV=1
Length = 466
Score = 348 bits (894), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 190/528 (35%), Positives = 294/528 (55%), Gaps = 78/528 (14%)
Query: 106 IIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVS-PS 164
++ VL G + + V +R + + F+ V DGSC LQ VV + L +
Sbjct: 6 VVDVLQGRVAVDSEVTVRGWVR--TRRDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQD 63
Query: 165 KIRPIGTCLMVE---GVLKQPSVQGKHAVELKVEKILHIGTVDH-DKYPLSRKRLPMDML 220
+ + T VE V+ P +G+ + EL+ + +G VD D YP++ KR ++ L
Sbjct: 64 DVLRLTTGCSVEITGNVVASPG-EGQ-SFELQATNVNVVGWVDDPDTYPMAAKRHSIEYL 121
Query: 221 RDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVTT 280
R+ AH RPRT + +V R+R +L A H FF +G+ +V P+I
Sbjct: 122 REVAHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLI---------------- 165
Query: 281 LFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTNE 340
TA D EG ++ + S + +E L R+E
Sbjct: 166 -----------TASDTEGAG-EMFRVSTLD----MENLPRTEQG---------------- 193
Query: 341 LVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPRF 400
KV+FS+DFF ++ +LTVSG+L+ E+YACAL NVY+FGP F
Sbjct: 194 --------------------KVDFSKDFFGKEAFLTVSGQLNGETYACALSNVYTFGPTF 233
Query: 401 RAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRID 460
RAE +++H AE M+E E+AF+ L+D A++ K++ + +L + + D+ F ++R+D
Sbjct: 234 RAENSNTARHLAEFWMIEPEVAFASLDDVAALAENLLKYVFQAVLNERADDMAFFAERVD 293
Query: 461 MTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYKR 520
+ RL+ +SS F ++ YT+AV+ L ++ FE + WGV L++EH YLA++ +K
Sbjct: 294 KEAVTRLEKFVSSDFAQVDYTDAVEILLNCGQQ-FENPVYWGVDLSSEHERYLAEQHFKA 352
Query: 521 PVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELGL 580
PV+V NYPK +K FY+R+NDDG TVAA D++ P G +I GSQ EER+ L++R++E+GL
Sbjct: 353 PVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQREERLAALDSRLEEMGL 412
Query: 581 PREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
+E Y WY DLRR+GT+ HSGF GF+ ++ + TG+ +VRD IPFPR+
Sbjct: 413 NKEDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460
>sp|Q3Z3J0|SYN_SHISS Asparagine--tRNA ligase OS=Shigella sonnei (strain Ss046) GN=asnS
PE=3 SV=1
Length = 466
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 280/493 (56%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q V+ ++L + ++ +R C ++V G + QG+ E++ K
Sbjct: 38 FLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQ-FEIQASK 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF G
Sbjct: 97 VEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQG 156
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F +V P+I TA D EG ++ + S + +
Sbjct: 157 FFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD----L 184
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E L R++ KV+F +DFF ++++L
Sbjct: 185 ENLPRNDQG------------------------------------KVDFDKDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEA 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K++ K +LE+ + D++F ++R+D + RL+ I + F ++ YT+AV LE K F
Sbjct: 269 MLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRK-F 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 ENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ + TG
Sbjct: 388 GEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTG 447
Query: 616 LTDVRDAIPFPRS 628
+ +VRD IPFPR+
Sbjct: 448 VQNVRDVIPFPRT 460
>sp|P0A8M2|SYN_SHIFL Asparagine--tRNA ligase OS=Shigella flexneri GN=asnS PE=3 SV=2
Length = 466
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 280/493 (56%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q V+ ++L + ++ +R C ++V G + QG+ E++ K
Sbjct: 38 FLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQ-FEIQASK 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF G
Sbjct: 97 VEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQG 156
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F +V P+I TA D EG ++ + S + +
Sbjct: 157 FFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD----L 184
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E L R++ KV+F +DFF ++++L
Sbjct: 185 ENLPRNDQG------------------------------------KVDFDKDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEA 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K++ K +LE+ + D++F ++R+D + RL+ I + F ++ YT+AV LE K F
Sbjct: 269 MLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRK-F 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 ENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ + TG
Sbjct: 388 GEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTG 447
Query: 616 LTDVRDAIPFPRS 628
+ +VRD IPFPR+
Sbjct: 448 VQNVRDVIPFPRT 460
>sp|Q0T6B1|SYN_SHIF8 Asparagine--tRNA ligase OS=Shigella flexneri serotype 5b (strain
8401) GN=asnS PE=3 SV=1
Length = 466
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 280/493 (56%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q V+ ++L + ++ +R C ++V G + QG+ E++ K
Sbjct: 38 FLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQ-FEIQASK 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF G
Sbjct: 97 VEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQG 156
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F +V P+I TA D EG ++ + S + +
Sbjct: 157 FFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD----L 184
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E L R++ KV+F +DFF ++++L
Sbjct: 185 ENLPRNDQG------------------------------------KVDFDKDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEA 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K++ K +LE+ + D++F ++R+D + RL+ I + F ++ YT+AV LE K F
Sbjct: 269 MLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRK-F 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 ENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ + TG
Sbjct: 388 GEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTG 447
Query: 616 LTDVRDAIPFPRS 628
+ +VRD IPFPR+
Sbjct: 448 VQNVRDVIPFPRT 460
>sp|Q31YR7|SYN_SHIBS Asparagine--tRNA ligase OS=Shigella boydii serotype 4 (strain
Sb227) GN=asnS PE=3 SV=1
Length = 466
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 280/493 (56%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q V+ ++L + ++ +R C ++V G + QG+ E++ K
Sbjct: 38 FLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQ-FEIQASK 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF G
Sbjct: 97 VEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQG 156
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F +V P+I TA D EG ++ + S + +
Sbjct: 157 FFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD----L 184
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E L R++ KV+F +DFF ++++L
Sbjct: 185 ENLPRNDQG------------------------------------KVDFDKDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEA 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K++ K +LE+ + D++F ++R+D + RL+ I + F ++ YT+AV LE K F
Sbjct: 269 MLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRK-F 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 ENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ + TG
Sbjct: 388 GEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTG 447
Query: 616 LTDVRDAIPFPRS 628
+ +VRD IPFPR+
Sbjct: 448 VQNVRDVIPFPRT 460
>sp|Q1RDS7|SYN_ECOUT Asparagine--tRNA ligase OS=Escherichia coli (strain UTI89 / UPEC)
GN=asnS PE=3 SV=1
Length = 466
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 280/493 (56%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q V+ ++L + ++ +R C ++V G + QG+ E++ K
Sbjct: 38 FLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQ-FEIQASK 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF G
Sbjct: 97 VEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQG 156
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F +V P+I TA D EG ++ + S + +
Sbjct: 157 FFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD----L 184
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E L R++ KV+F +DFF ++++L
Sbjct: 185 ENLPRNDQG------------------------------------KVDFDKDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEA 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K++ K +LE+ + D++F ++R+D + RL+ I + F ++ YT+AV LE K F
Sbjct: 269 MLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRK-F 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 ENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ + TG
Sbjct: 388 GEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTG 447
Query: 616 LTDVRDAIPFPRS 628
+ +VRD IPFPR+
Sbjct: 448 VQNVRDVIPFPRT 460
>sp|P0A8M0|SYN_ECOLI Asparagine--tRNA ligase OS=Escherichia coli (strain K12) GN=asnS
PE=1 SV=2
Length = 466
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 280/493 (56%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q V+ ++L + ++ +R C ++V G + QG+ E++ K
Sbjct: 38 FLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQ-FEIQASK 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF G
Sbjct: 97 VEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQG 156
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F +V P+I TA D EG ++ + S + +
Sbjct: 157 FFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD----L 184
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E L R++ KV+F +DFF ++++L
Sbjct: 185 ENLPRNDQG------------------------------------KVDFDKDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEA 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K++ K +LE+ + D++F ++R+D + RL+ I + F ++ YT+AV LE K F
Sbjct: 269 MLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRK-F 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 ENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ + TG
Sbjct: 388 GEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTG 447
Query: 616 LTDVRDAIPFPRS 628
+ +VRD IPFPR+
Sbjct: 448 VQNVRDVIPFPRT 460
>sp|B1IW01|SYN_ECOLC Asparagine--tRNA ligase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=asnS PE=3 SV=1
Length = 466
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 280/493 (56%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q V+ ++L + ++ +R C ++V G + QG+ E++ K
Sbjct: 38 FLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQ-FEIQASK 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF G
Sbjct: 97 VEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQG 156
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F +V P+I TA D EG ++ + S + +
Sbjct: 157 FFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD----L 184
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E L R++ KV+F +DFF ++++L
Sbjct: 185 ENLPRNDQG------------------------------------KVDFDKDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEA 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K++ K +LE+ + D++F ++R+D + RL+ I + F ++ YT+AV LE K F
Sbjct: 269 MLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRK-F 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 ENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ + TG
Sbjct: 388 GEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTG 447
Query: 616 LTDVRDAIPFPRS 628
+ +VRD IPFPR+
Sbjct: 448 VQNVRDVIPFPRT 460
>sp|P0A8M1|SYN_ECOL6 Asparagine--tRNA ligase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=asnS PE=3 SV=2
Length = 466
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 280/493 (56%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q V+ ++L + ++ +R C ++V G + QG+ E++ K
Sbjct: 38 FLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQ-FEIQASK 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF G
Sbjct: 97 VEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQG 156
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F +V P+I TA D EG ++ + S + +
Sbjct: 157 FFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD----L 184
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E L R++ KV+F +DFF ++++L
Sbjct: 185 ENLPRNDQG------------------------------------KVDFDKDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEA 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K++ K +LE+ + D++F ++R+D + RL+ I + F ++ YT+AV LE K F
Sbjct: 269 MLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRK-F 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 ENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ + TG
Sbjct: 388 GEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTG 447
Query: 616 LTDVRDAIPFPRS 628
+ +VRD IPFPR+
Sbjct: 448 VQNVRDVIPFPRT 460
>sp|Q0TJC3|SYN_ECOL5 Asparagine--tRNA ligase OS=Escherichia coli O6:K15:H31 (strain 536
/ UPEC) GN=asnS PE=3 SV=1
Length = 466
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 280/493 (56%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q V+ ++L + ++ +R C ++V G + QG+ E++ K
Sbjct: 38 FLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQ-FEIQASK 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF G
Sbjct: 97 VEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQG 156
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F +V P+I TA D EG ++ + S + +
Sbjct: 157 FFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD----L 184
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E L R++ KV+F +DFF ++++L
Sbjct: 185 ENLPRNDQG------------------------------------KVDFDKDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEA 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K++ K +LE+ + D++F ++R+D + RL+ I + F ++ YT+AV LE K F
Sbjct: 269 MLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRK-F 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 ENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ + TG
Sbjct: 388 GEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTG 447
Query: 616 LTDVRDAIPFPRS 628
+ +VRD IPFPR+
Sbjct: 448 VQNVRDVIPFPRT 460
>sp|A7ZYN3|SYN_ECOHS Asparagine--tRNA ligase OS=Escherichia coli O9:H4 (strain HS)
GN=asnS PE=3 SV=1
Length = 466
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 280/493 (56%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q V+ ++L + ++ +R C ++V G + QG+ E++ K
Sbjct: 38 FLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQ-FEIQASK 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF G
Sbjct: 97 VEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQG 156
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F +V P+I TA D EG ++ + S + +
Sbjct: 157 FFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD----L 184
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E L R++ KV+F +DFF ++++L
Sbjct: 185 ENLPRNDQG------------------------------------KVDFDKDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEA 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K++ K +LE+ + D++F ++R+D + RL+ I + F ++ YT+AV LE K F
Sbjct: 269 MLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRK-F 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 ENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ + TG
Sbjct: 388 GEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTG 447
Query: 616 LTDVRDAIPFPRS 628
+ +VRD IPFPR+
Sbjct: 448 VQNVRDVIPFPRT 460
>sp|A7ZK21|SYN_ECO24 Asparagine--tRNA ligase OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=asnS PE=3 SV=1
Length = 466
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 280/493 (56%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTLVSPSK--IRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q V+ ++L + ++ +R C ++V G + QG+ E++ K
Sbjct: 38 FLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQ-FEIQASK 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R +L A H FF G
Sbjct: 97 VEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQG 156
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F +V P+I TA D EG ++ + S + +
Sbjct: 157 FFWVSTPLI---------------------------TASDTEGAG-EMFRVSTLD----L 184
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E L R++ KV+F +DFF ++++L
Sbjct: 185 ENLPRNDQG------------------------------------KVDFDKDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE M+E E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEA 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K++ K +LE+ + D++F ++R+D + RL+ I + F ++ YT+AV LE K F
Sbjct: 269 MLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRK-F 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E + WGV L++EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 ENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I GSQ EER+D+L+ R+ E+GL +E Y WY DLRR+GTV HSGF GF+ ++ + TG
Sbjct: 388 GEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTG 447
Query: 616 LTDVRDAIPFPRS 628
+ +VRD IPFPR+
Sbjct: 448 VQNVRDVIPFPRT 460
>sp|Q7MJS0|SYN_VIBVY Asparagine--tRNA ligase OS=Vibrio vulnificus (strain YJ016) GN=asnS
PE=3 SV=1
Length = 466
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 192/524 (36%), Positives = 287/524 (54%), Gaps = 76/524 (14%)
Query: 109 VLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVSPSK--- 165
VL G + + V +R + + FL + DGSC +Q VV + L + +
Sbjct: 9 VLSGKLAVDSEVTVRGWIR--TRRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYNDEVL 66
Query: 166 IRPIGTCLMVEGVLKQPSVQGKHAVELKVEKILHIGTV-DHDKYPLSRKRLPMDMLRDSA 224
G + V G + G+ A EL + +G V D D YP+++ R ++ LR+ A
Sbjct: 67 KLTTGCSVEVTGKIVASPAAGQ-AFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVA 125
Query: 225 HFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVTTLFDK 284
H RPRT + +V R+R SL+ A H F+ G+ ++ P+I
Sbjct: 126 HLRPRTNVIGAVARVRHSLSQAIHRFYHEQGYYWLSAPLI-------------------- 165
Query: 285 REKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTNELVSH 344
TA D EG ++ + S + +N L R+ES
Sbjct: 166 -------TASDCEGAG-EMFRVSTLDLAN----LPRTESG-------------------- 193
Query: 345 LESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPRFRAEK 404
V+F+EDFF ++T+LTVSG+L+ E+YACAL +Y+FGP FRAE
Sbjct: 194 ----------------DVDFNEDFFGKETFLTVSGQLNGEAYACALSKIYTFGPTFRAEN 237
Query: 405 KESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRIDMTCI 464
+S+H AE MVE E+AF+ L D K A+D K++ +LE+ DLEF + RID I
Sbjct: 238 SNTSRHLAEFWMVEPEVAFADLNDIAKLAEDMLKYVFAAVLEERRDDLEFFASRIDKDVI 297
Query: 465 DRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYKRPVIV 524
+RL+ +SS F ++ YT+A++ L + + FE +EWG+ +++EH +LA+E +K PVIV
Sbjct: 298 NRLEQFVSSDFAQVDYTDAIQILLD-SGREFEFPVEWGIDMSSEHERFLAEEHFKAPVIV 356
Query: 525 YNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELGLPREQ 584
NYPK +K FY+R+N+DG TVAA D++ P G +I GSQ EER+D+L+ R+ E+G+ E
Sbjct: 357 KNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMVEMGIDPEH 416
Query: 585 YEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
WY DLRR+GTV H+GF GF+ +V + TG+ +VRD IPFPR+
Sbjct: 417 MNWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460
>sp|Q8DAF0|SYN_VIBVU Asparagine--tRNA ligase OS=Vibrio vulnificus (strain CMCP6) GN=asnS
PE=3 SV=1
Length = 466
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 192/524 (36%), Positives = 287/524 (54%), Gaps = 76/524 (14%)
Query: 109 VLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVSPSK--- 165
VL G + + V +R + + FL + DGSC +Q VV + L + +
Sbjct: 9 VLSGKLAVDSEVTVRGWIR--TRRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYNDEVL 66
Query: 166 IRPIGTCLMVEGVLKQPSVQGKHAVELKVEKILHIGTV-DHDKYPLSRKRLPMDMLRDSA 224
G + V G + G+ A EL + +G V D D YP+++ R ++ LR+ A
Sbjct: 67 KLTTGCSVEVTGKIVASPAAGQ-AFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVA 125
Query: 225 HFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVTTLFDK 284
H RPRT + +V R+R SL+ A H F+ G+ ++ P+I
Sbjct: 126 HLRPRTNVIGAVARVRHSLSQAIHRFYHEQGYYWLSAPLI-------------------- 165
Query: 285 REKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTNELVSH 344
TA D EG ++ + S + +N L R+ES
Sbjct: 166 -------TASDCEGAG-EMFRVSTLDLAN----LPRTESG-------------------- 193
Query: 345 LESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPRFRAEK 404
V+F+EDFF ++T+LTVSG+L+ E+YACAL +Y+FGP FRAE
Sbjct: 194 ----------------DVDFNEDFFGKETFLTVSGQLNGEAYACALSKIYTFGPTFRAEN 237
Query: 405 KESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRIDMTCI 464
+S+H AE MVE E+AF+ L D K A+D K++ +LE+ DLEF + RID I
Sbjct: 238 SNTSRHLAEFWMVEPEVAFADLNDIAKLAEDMLKYVFAAVLEERRDDLEFFASRIDKDVI 297
Query: 465 DRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYKRPVIV 524
+RL+ +SS F ++ YT+A++ L + + FE +EWG+ +++EH +LA+E +K PVIV
Sbjct: 298 NRLEQFVSSDFAQVDYTDAIQILLD-SGREFEFPVEWGIDMSSEHERFLAEEHFKAPVIV 356
Query: 525 YNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELGLPREQ 584
NYPK +K FY+R+N+DG TVAA D++ P G +I GSQ EER+D+L+ R+ E+G+ E
Sbjct: 357 KNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMVEMGIDPEH 416
Query: 585 YEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
WY DLRR+GTV H+GF GF+ +V + TG+ +VRD IPFPR+
Sbjct: 417 MNWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460
>sp|Q5WUG0|SYN_LEGPL Asparagine--tRNA ligase OS=Legionella pneumophila (strain Lens)
GN=asnS PE=3 SV=1
Length = 467
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 203/532 (38%), Positives = 298/532 (56%), Gaps = 76/532 (14%)
Query: 105 TIIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVSPS 164
TI + L G I V +R ++ + F+ + DGSC + +Q+V L +
Sbjct: 6 TIKQCLDGEISIDETVTVRGWVKT--RRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYQ 63
Query: 165 K--IRPIGTCLMVEGVLKQPSVQGK-HAVELKVEKILHIGTVDH-DKYPLSRKRLPMDML 220
K + C M+ K + QGK E++ E I +G V++ D YP+ KR ++ L
Sbjct: 64 KEVTKLTAGCSMI-ATGKLVASQGKGQFFEIQAESIEVVGWVENPDTYPIQAKRHTLEFL 122
Query: 221 RDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVTT 280
R+ AH RPRT T+++V R+R SL A H F + Q GF F V T
Sbjct: 123 REVAHLRPRTNTISAVTRVRHSLAQAI------HRFYHEQ----------GF---FWVHT 163
Query: 281 LFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTNE 340
TA D EG E+ R
Sbjct: 164 PI--------ITASDCEGAG----------------EMFR-------------------- 179
Query: 341 LVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPRF 400
VS L+ LL P +++FS+DFF R+T+LTVSG+L++E+Y A+ VY+FGP F
Sbjct: 180 -VSTLD----LLNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTFGPTF 234
Query: 401 RAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRID 460
RAE +S+H AE M+E EIAF+ LED K + + ++LCK +LE+ S D++F ++ +
Sbjct: 235 RAENSNTSRHLAEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERSDDMDFFNQFVA 294
Query: 461 MTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYKR 520
CI+R++ + S FE +TYT+A+KALE +E+ FE + WG+ L +EH YLA+ + K+
Sbjct: 295 PGCIERMEHIADSEFEIMTYTDAIKALE-ASEQKFEFPVSWGLDLQSEHERYLAEVLCKK 353
Query: 521 PVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELGL 580
PVIV NYP+ +K FY+RLNDDG TVAA D++ P G +I GSQ EER+++L+ R+ E L
Sbjct: 354 PVIVTNYPQEIKGFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEILDRRMDECNL 413
Query: 581 PREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRSLGKA 632
+E Y+WY DLRR+GTV H+GF GF+ ++ + TG+++VRD IPFPR+ G A
Sbjct: 414 NKEHYQWYRDLRRYGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRTPGHA 465
>sp|A1JMN8|SYN_YERE8 Asparagine--tRNA ligase OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=asnS PE=3 SV=1
Length = 466
Score = 345 bits (885), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 197/529 (37%), Positives = 292/529 (55%), Gaps = 80/529 (15%)
Query: 106 IIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVSPSK 165
++ VL G A + + V +R + + F+ V DGSC LQ VV +TL P+
Sbjct: 6 VVDVLQGRAAVDSEVTVRGWVR--TRRDSKAGISFVAVYDGSCFDPLQAVVNNTL--PNY 61
Query: 166 IRPI-----GTCLMVEGVLKQPSVQGKHAVELKVEKILHIGTVDH-DKYPLSRKRLPMDM 219
+ G + V G + +G+ + E++ I +G VD D YP++ KR ++
Sbjct: 62 QDEVLHLTTGCSVEVTGTVVASPGEGQ-SFEIQATAIKVVGWVDDPDTYPMAAKRHSIEY 120
Query: 220 LRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVT 279
LR+ AH RPRT + +V R+R +L A H FF D G+ F V+
Sbjct: 121 LREVAHLRPRTNLIGAVARVRHTLAQAIHRFF----------------DENGY---FWVS 161
Query: 280 TLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTN 339
T TA D EG E+ R
Sbjct: 162 TPL--------ITASDTEGAG----------------EMFR------------------- 178
Query: 340 ELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPR 399
VS L+ L P T V+FSEDFF ++ +LTVSG+L+ E+YACAL VY+FGP
Sbjct: 179 --VSTLD----LENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPT 232
Query: 400 FRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRI 459
FRAE +S+H AE MVE E+AF+ L+D A+ K++ + +L + + D++F ++R+
Sbjct: 233 FRAENSNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERV 292
Query: 460 DMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYK 519
D +DRLQ ++S F ++ YT+A++ L +K FE + WG+ L++EH YLA++ +K
Sbjct: 293 DKDAVDRLQRFVTSDFAQVDYTDAIEILLASGQK-FENDVSWGIDLSSEHERYLAEQHFK 351
Query: 520 RPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELG 579
PV+V NYPK +K FY+R+N+DG TVAA D++ P G +I GSQ EER+D+L+ R+ E+G
Sbjct: 352 APVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMG 411
Query: 580 LPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
L +E Y WY DLRR+GTV HSGF GF+ ++ + TG+ +VRD IPFPR+
Sbjct: 412 LNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRT 460
>sp|A3QE68|SYN_SHELP Asparagine--tRNA ligase OS=Shewanella loihica (strain ATCC BAA-1088
/ PV-4) GN=asnS PE=3 SV=1
Length = 466
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/493 (39%), Positives = 286/493 (58%), Gaps = 74/493 (15%)
Query: 140 FLQVSDGSCVASLQVVVESTL--VSPSKIRPIGTC-LMVEGVLKQPSVQGKHAVELKVEK 196
FL V DGSC +Q VV ++L + +R C +++ G L + +G+ A E++V K
Sbjct: 38 FLAVYDGSCFDPIQGVVPNSLDNYNDEILRLTAGCSVVMTGELVESPGKGQ-AFEMQVTK 96
Query: 197 ILHIGTV-DHDKYPLSRKRLPMDMLRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHG 255
+ G V D D YP++ KR ++ LR+ AH RPRT + +V R+R+ L+HA H
Sbjct: 97 VEVTGWVEDPDTYPMAAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSHAI------HN 150
Query: 256 FLYVQVPVITTTDSEGFSEKFQVTTLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKV 315
F + EGF V+T TA D EG
Sbjct: 151 FY----------NEEGF---IWVSTPL--------ITASDCEGAG--------------- 174
Query: 316 EELKRSESNREALIAAVQDLRKTNELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYL 375
E+ R VS L+ L P KV+FSEDFF ++++L
Sbjct: 175 -EMFR---------------------VSTLD----LENLPRTDDGKVDFSEDFFGKESFL 208
Query: 376 TVSGRLHLESYACALGNVYSFGPRFRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADD 435
TVSG+L+ E+YACAL +Y+FGP FRAE +S+H AE MVE E+AF+ L D A+
Sbjct: 209 TVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMVEPEVAFADLNDVAGLAER 268
Query: 436 YFKFLCKWILEDCSKDLEFVSKRIDMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIF 495
K+ + +L + DLEF ++R+D T I+RL+S ++S F ++ YT+A++ L+ +K F
Sbjct: 269 MLKYCFRAVLNERRDDLEFFAQRVDKTVIERLESFVNSDFAQVDYTDAIEILKSCGKK-F 327
Query: 496 ETKLEWGVALTAEHLSYLADEIYKRPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKG 555
E +EWG+ L +EH YLA+E +K PV+V NYPK +K FY+RLN+DG TVAA D++ P
Sbjct: 328 EFDVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGI 387
Query: 556 GTVITGSQNEERIDMLNTRIKELGLPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTG 615
G +I G+Q EER+D+L+TR+ E+GL +E Y WY DLRR+GTV HSGF GF+ +V + TG
Sbjct: 388 GEIIGGAQREERLDVLDTRLDEMGLSKEDYWWYRDLRRYGTVPHSGFGLGFERLVSYVTG 447
Query: 616 LTDVRDAIPFPRS 628
++++RD IPFPR+
Sbjct: 448 VSNIRDVIPFPRA 460
>sp|Q66CG7|SYN_YERPS Asparagine--tRNA ligase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=asnS PE=3 SV=1
Length = 466
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/529 (37%), Positives = 292/529 (55%), Gaps = 80/529 (15%)
Query: 106 IIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVSPSK 165
++ VL G A + + V +R + + F+ V DGSC LQ VV +TL P+
Sbjct: 6 VVDVLQGRAAVGSEVTVRGWVR--TRRDSKAGISFVAVYDGSCFDPLQAVVNNTL--PNY 61
Query: 166 IRPI-----GTCLMVEGVLKQPSVQGKHAVELKVEKILHIGTVDH-DKYPLSRKRLPMDM 219
+ G + V G + +G+ + E++ I +G VD D YP++ KR ++
Sbjct: 62 QDEVLHLTTGCSVEVTGTVVASPGEGQ-SFEIQATAINVVGWVDDPDTYPMAAKRHSIEY 120
Query: 220 LRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVT 279
LR+ AH RPRT + +V R+R +L A H FF D G+ F V+
Sbjct: 121 LREVAHLRPRTNLIGAVARVRHTLAQAIHRFF----------------DENGY---FWVS 161
Query: 280 TLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTN 339
T TA D EG E+ R
Sbjct: 162 TPL--------ITASDTEGAG----------------EMFR------------------- 178
Query: 340 ELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPR 399
VS L+ L P T V+FSEDFF ++ +LTVSG+L+ E+YACAL VY+FGP
Sbjct: 179 --VSTLD----LENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPT 232
Query: 400 FRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRI 459
FRAE +S+H AE MVE E+AF+ L+D A+ K++ + +L + + D++F ++R+
Sbjct: 233 FRAENSNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERV 292
Query: 460 DMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYK 519
D +DRLQ ++S F ++ YT+A++ L +K FE + WG+ L++EH YLA++ +K
Sbjct: 293 DKDAVDRLQRFVTSDFAQVDYTDAIEILLASGQK-FENDVSWGIDLSSEHERYLAEKHFK 351
Query: 520 RPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELG 579
PV+V NYPK +K FY+R+N+DG TVAA D++ P G +I GSQ EER+D+L+ R+ E+G
Sbjct: 352 APVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMG 411
Query: 580 LPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
L +E Y WY DLRR+GTV HSGF GF+ ++ + TG+ +VRD IPFPR+
Sbjct: 412 LNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRT 460
>sp|A4TMZ6|SYN_YERPP Asparagine--tRNA ligase OS=Yersinia pestis (strain Pestoides F)
GN=asnS PE=3 SV=1
Length = 466
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/529 (37%), Positives = 292/529 (55%), Gaps = 80/529 (15%)
Query: 106 IIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVSPSK 165
++ VL G A + + V +R + + F+ V DGSC LQ VV +TL P+
Sbjct: 6 VVDVLQGRAAVGSEVTVRGWVR--TRRDSKAGISFVAVYDGSCFDPLQAVVNNTL--PNY 61
Query: 166 IRPI-----GTCLMVEGVLKQPSVQGKHAVELKVEKILHIGTVDH-DKYPLSRKRLPMDM 219
+ G + V G + +G+ + E++ I +G VD D YP++ KR ++
Sbjct: 62 QDEVLHLTTGCSVEVTGTVVASPGEGQ-SFEIQATAINVVGWVDDPDTYPMAAKRHSIEY 120
Query: 220 LRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVT 279
LR+ AH RPRT + +V R+R +L A H FF D G+ F V+
Sbjct: 121 LREVAHLRPRTNLIGAVARVRHTLAQAIHRFF----------------DENGY---FWVS 161
Query: 280 TLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTN 339
T TA D EG E+ R
Sbjct: 162 TPL--------ITASDTEGAG----------------EMFR------------------- 178
Query: 340 ELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPR 399
VS L+ L P T V+FSEDFF ++ +LTVSG+L+ E+YACAL VY+FGP
Sbjct: 179 --VSTLD----LENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPT 232
Query: 400 FRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRI 459
FRAE +S+H AE MVE E+AF+ L+D A+ K++ + +L + + D++F ++R+
Sbjct: 233 FRAENSNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERV 292
Query: 460 DMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYK 519
D +DRLQ ++S F ++ YT+A++ L +K FE + WG+ L++EH YLA++ +K
Sbjct: 293 DKDAVDRLQRFVTSDFAQVDYTDAIEILLASGQK-FENDVSWGIDLSSEHERYLAEKHFK 351
Query: 520 RPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELG 579
PV+V NYPK +K FY+R+N+DG TVAA D++ P G +I GSQ EER+D+L+ R+ E+G
Sbjct: 352 APVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMG 411
Query: 580 LPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
L +E Y WY DLRR+GTV HSGF GF+ ++ + TG+ +VRD IPFPR+
Sbjct: 412 LNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRT 460
>sp|Q1CGI7|SYN_YERPN Asparagine--tRNA ligase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=asnS PE=3 SV=1
Length = 466
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/529 (37%), Positives = 292/529 (55%), Gaps = 80/529 (15%)
Query: 106 IIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVSPSK 165
++ VL G A + + V +R + + F+ V DGSC LQ VV +TL P+
Sbjct: 6 VVDVLQGRAAVGSEVTVRGWVR--TRRDSKAGISFVAVYDGSCFDPLQAVVNNTL--PNY 61
Query: 166 IRPI-----GTCLMVEGVLKQPSVQGKHAVELKVEKILHIGTVDH-DKYPLSRKRLPMDM 219
+ G + V G + +G+ + E++ I +G VD D YP++ KR ++
Sbjct: 62 QDEVLHLTTGCSVEVTGTVVASPGEGQ-SFEIQATAINVVGWVDDPDTYPMAAKRHSIEY 120
Query: 220 LRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVT 279
LR+ AH RPRT + +V R+R +L A H FF D G+ F V+
Sbjct: 121 LREVAHLRPRTNLIGAVARVRHTLAQAIHRFF----------------DENGY---FWVS 161
Query: 280 TLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTN 339
T TA D EG E+ R
Sbjct: 162 TPL--------ITASDTEGAG----------------EMFR------------------- 178
Query: 340 ELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPR 399
VS L+ L P T V+FSEDFF ++ +LTVSG+L+ E+YACAL VY+FGP
Sbjct: 179 --VSTLD----LENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPT 232
Query: 400 FRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRI 459
FRAE +S+H AE MVE E+AF+ L+D A+ K++ + +L + + D++F ++R+
Sbjct: 233 FRAENSNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERV 292
Query: 460 DMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYK 519
D +DRLQ ++S F ++ YT+A++ L +K FE + WG+ L++EH YLA++ +K
Sbjct: 293 DKDAVDRLQRFVTSDFAQVDYTDAIEILLASGQK-FENDVSWGIDLSSEHERYLAEKHFK 351
Query: 520 RPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELG 579
PV+V NYPK +K FY+R+N+DG TVAA D++ P G +I GSQ EER+D+L+ R+ E+G
Sbjct: 352 APVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMG 411
Query: 580 LPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
L +E Y WY DLRR+GTV HSGF GF+ ++ + TG+ +VRD IPFPR+
Sbjct: 412 LNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRT 460
>sp|P58697|SYN_YERPE Asparagine--tRNA ligase OS=Yersinia pestis GN=asnS PE=3 SV=1
Length = 466
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/529 (37%), Positives = 292/529 (55%), Gaps = 80/529 (15%)
Query: 106 IIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVSPSK 165
++ VL G A + + V +R + + F+ V DGSC LQ VV +TL P+
Sbjct: 6 VVDVLQGRAAVGSEVTVRGWVR--TRRDSKAGISFVAVYDGSCFDPLQAVVNNTL--PNY 61
Query: 166 IRPI-----GTCLMVEGVLKQPSVQGKHAVELKVEKILHIGTVDH-DKYPLSRKRLPMDM 219
+ G + V G + +G+ + E++ I +G VD D YP++ KR ++
Sbjct: 62 QDEVLHLTTGCSVEVTGTVVASPGEGQ-SFEIQATAINVVGWVDDPDTYPMAAKRHSIEY 120
Query: 220 LRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVT 279
LR+ AH RPRT + +V R+R +L A H FF D G+ F V+
Sbjct: 121 LREVAHLRPRTNLIGAVARVRHTLAQAIHRFF----------------DENGY---FWVS 161
Query: 280 TLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTN 339
T TA D EG E+ R
Sbjct: 162 TPL--------ITASDTEGAG----------------EMFR------------------- 178
Query: 340 ELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPR 399
VS L+ L P T V+FSEDFF ++ +LTVSG+L+ E+YACAL VY+FGP
Sbjct: 179 --VSTLD----LENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPT 232
Query: 400 FRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRI 459
FRAE +S+H AE MVE E+AF+ L+D A+ K++ + +L + + D++F ++R+
Sbjct: 233 FRAENSNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERV 292
Query: 460 DMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYK 519
D +DRLQ ++S F ++ YT+A++ L +K FE + WG+ L++EH YLA++ +K
Sbjct: 293 DKDAVDRLQRFVTSDFAQVDYTDAIEILLASGQK-FENDVSWGIDLSSEHERYLAEKHFK 351
Query: 520 RPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELG 579
PV+V NYPK +K FY+R+N+DG TVAA D++ P G +I GSQ EER+D+L+ R+ E+G
Sbjct: 352 APVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMG 411
Query: 580 LPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
L +E Y WY DLRR+GTV HSGF GF+ ++ + TG+ +VRD IPFPR+
Sbjct: 412 LNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRT 460
>sp|Q1CA47|SYN_YERPA Asparagine--tRNA ligase OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=asnS PE=3 SV=1
Length = 466
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/529 (37%), Positives = 292/529 (55%), Gaps = 80/529 (15%)
Query: 106 IIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVSPSK 165
++ VL G A + + V +R + + F+ V DGSC LQ VV +TL P+
Sbjct: 6 VVDVLQGRAAVGSEVTVRGWVR--TRRDSKAGISFVAVYDGSCFDPLQAVVNNTL--PNY 61
Query: 166 IRPI-----GTCLMVEGVLKQPSVQGKHAVELKVEKILHIGTVDH-DKYPLSRKRLPMDM 219
+ G + V G + +G+ + E++ I +G VD D YP++ KR ++
Sbjct: 62 QDEVLHLTTGCSVEVTGTVVASPGEGQ-SFEIQATAINVVGWVDDPDTYPMAAKRHSIEY 120
Query: 220 LRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVT 279
LR+ AH RPRT + +V R+R +L A H FF D G+ F V+
Sbjct: 121 LREVAHLRPRTNLIGAVARVRHTLAQAIHRFF----------------DENGY---FWVS 161
Query: 280 TLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTN 339
T TA D EG E+ R
Sbjct: 162 TPL--------ITASDTEGAG----------------EMFR------------------- 178
Query: 340 ELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPR 399
VS L+ L P T V+FSEDFF ++ +LTVSG+L+ E+YACAL VY+FGP
Sbjct: 179 --VSTLD----LENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPT 232
Query: 400 FRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRI 459
FRAE +S+H AE MVE E+AF+ L+D A+ K++ + +L + + D++F ++R+
Sbjct: 233 FRAENSNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERV 292
Query: 460 DMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYK 519
D +DRLQ ++S F ++ YT+A++ L +K FE + WG+ L++EH YLA++ +K
Sbjct: 293 DKDAVDRLQRFVTSDFAQVDYTDAIEILLASGQK-FENDVSWGIDLSSEHERYLAEKHFK 351
Query: 520 RPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELG 579
PV+V NYPK +K FY+R+N+DG TVAA D++ P G +I GSQ EER+D+L+ R+ E+G
Sbjct: 352 APVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMG 411
Query: 580 LPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
L +E Y WY DLRR+GTV HSGF GF+ ++ + TG+ +VRD IPFPR+
Sbjct: 412 LNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRT 460
>sp|A7FJU5|SYN_YERP3 Asparagine--tRNA ligase OS=Yersinia pseudotuberculosis serotype
O:1b (strain IP 31758) GN=asnS PE=3 SV=1
Length = 466
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/529 (37%), Positives = 292/529 (55%), Gaps = 80/529 (15%)
Query: 106 IIRVLGGSAGISNNVPLREKLEALVPKPPPPSTVFLQVSDGSCVASLQVVVESTLVSPSK 165
++ VL G A + + V +R + + F+ V DGSC LQ VV +TL P+
Sbjct: 6 VVDVLQGRAAVGSEVTVRGWVR--TRRDSKAGISFVAVYDGSCFDPLQAVVNNTL--PNY 61
Query: 166 IRPI-----GTCLMVEGVLKQPSVQGKHAVELKVEKILHIGTVDH-DKYPLSRKRLPMDM 219
+ G + V G + +G+ + E++ I +G VD D YP++ KR ++
Sbjct: 62 QDEVLHLTTGCSVEVTGTVVASPGEGQ-SFEIQATAINVVGWVDDPDTYPMAAKRHSIEY 120
Query: 220 LRDSAHFRPRTTTVASVMRIRSSLTHATHTFFQNHGFLYVQVPVITTTDSEGFSEKFQVT 279
LR+ AH RPRT + +V R+R +L A H FF D G+ F V+
Sbjct: 121 LREVAHLRPRTNLIGAVARVRHTLAQAIHRFF----------------DENGY---FWVS 161
Query: 280 TLFDKREKEGPKTAKDIEGVNLDILKASIKEKSNKVEELKRSESNREALIAAVQDLRKTN 339
T TA D EG E+ R
Sbjct: 162 TPL--------ITASDTEGAG----------------EMFR------------------- 178
Query: 340 ELVSHLESRDKLLQAPSVKTDKVNFSEDFFSRQTYLTVSGRLHLESYACALGNVYSFGPR 399
VS L+ L P T V+FSEDFF ++ +LTVSG+L+ E+YACAL VY+FGP
Sbjct: 179 --VSTLD----LENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPT 232
Query: 400 FRAEKKESSKHAAEMLMVETEIAFSQLEDAMKCADDYFKFLCKWILEDCSKDLEFVSKRI 459
FRAE +S+H AE MVE E+AF+ L+D A+ K++ + +L + + D++F ++R+
Sbjct: 233 FRAENSNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERV 292
Query: 460 DMTCIDRLQSVISSSFEKITYTEAVKALEKVTEKIFETKLEWGVALTAEHLSYLADEIYK 519
D +DRLQ ++S F ++ YT+A++ L +K FE + WG+ L++EH YLA++ +K
Sbjct: 293 DKDAVDRLQRFVTSDFAQVDYTDAIEILLASGQK-FENDVSWGIDLSSEHERYLAEKHFK 351
Query: 520 RPVIVYNYPKAVKPFYVRLNDDGNTVAAFDMVVPKGGTVITGSQNEERIDMLNTRIKELG 579
PV+V NYPK +K FY+R+N+DG TVAA D++ P G +I GSQ EER+D+L+ R+ E+G
Sbjct: 352 APVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMG 411
Query: 580 LPREQYEWYLDLRRHGTVKHSGFSFGFDLMVLFTTGLTDVRDAIPFPRS 628
L +E Y WY DLRR+GTV HSGF GF+ ++ + TG+ +VRD IPFPR+
Sbjct: 412 LNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRT 460
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,935,474
Number of Sequences: 539616
Number of extensions: 9807253
Number of successful extensions: 36309
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 468
Number of HSP's that attempted gapping in prelim test: 33637
Number of HSP's gapped (non-prelim): 2378
length of query: 634
length of database: 191,569,459
effective HSP length: 124
effective length of query: 510
effective length of database: 124,657,075
effective search space: 63575108250
effective search space used: 63575108250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)