Your job contains 1 sequence.
>006718
MVVNNSVFCSTPELVEEELATMEGLNVEKTEGIEEIKHEEFRENVSRVETFGESIEEKGR
ESSSSSDFLTSETTGHEEQSHSSSEESSSPPLGWPVQKAEAQDSSSVDGNEKIEKSRLDL
EKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPL
PLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLD
NMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENT
RKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQF
SPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFVV
DTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFN
IVARIDDLLYVDDLTKHSDSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPA
LVSPAKGDISPFRTSSKIPQRGMGVKKALTDYLSIENKGKDYSNSIDEADSTLNIIREAS
PSQTETESFECTKKAVSSPTKNRVVEEGILRMGL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006718
(634 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2185153 - symbol:ROPGEF7 "ROP (rho of plants) ... 1654 4.0e-170 1
TAIR|locus:2153684 - symbol:ROPGEF5 "ROP (rho of plants) ... 1591 1.9e-163 1
TAIR|locus:2121828 - symbol:ROPGEF1 "ROP (rho of plants) ... 1260 2.2e-128 1
TAIR|locus:2078976 - symbol:ROPGEF6 "ROP (rho of plants) ... 1243 1.4e-126 1
TAIR|locus:2126071 - symbol:ROPGEF3 "ROP (rho of plants) ... 1132 8.2e-115 1
TAIR|locus:2198220 - symbol:ROPGEF2 "ROP (rho of plants) ... 1066 8.1e-108 1
TAIR|locus:2050699 - symbol:ROPGEF4 "ROP (rho of plants) ... 992 5.6e-100 1
TAIR|locus:2180781 - symbol:ROPGEF10 "ROP (rho of plants)... 907 5.7e-91 1
TAIR|locus:2093467 - symbol:ROPGEF13 "ROP (rho of plants)... 890 3.6e-89 1
TAIR|locus:2028701 - symbol:ROPGEF14 "ROP (rho of plants)... 802 7.6e-80 1
TAIR|locus:2017844 - symbol:ROPGEF12 "ROP (rho of plants)... 744 1.1e-73 1
TAIR|locus:2091742 - symbol:ROPGEF8 "ROP (rho of plants) ... 742 1.7e-73 1
TAIR|locus:2119320 - symbol:ROPGEF9 "ROP (rho of plants) ... 723 1.8e-71 1
TAIR|locus:2018169 - symbol:ROPGEF11 "ROP (rho of plants)... 719 4.8e-71 1
>TAIR|locus:2185153 [details] [associations]
symbol:ROPGEF7 "ROP (rho of plants) guanine nucleotide
exchange factor 7" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR005512 Pfam:PF03759 PROSITE:PS51334 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005089 EMBL:AL162508
HOGENOM:HOG000238290 EMBL:BT015831 EMBL:BT020213 IPI:IPI00547496
PIR:T48222 RefSeq:NP_195821.1 UniGene:At.50417
ProteinModelPortal:Q9LZN0 SMR:Q9LZN0 DIP:DIP-59396N PaxDb:Q9LZN0
PRIDE:Q9LZN0 EnsemblPlants:AT5G02010.1 GeneID:831858
KEGG:ath:AT5G02010 TAIR:At5g02010 eggNOG:NOG294244
InParanoid:Q9LZN0 OMA:PTWQTFP PhylomeDB:Q9LZN0
ProtClustDB:CLSN2916745 Genevestigator:Q9LZN0 Uniprot:Q9LZN0
Length = 546
Score = 1654 (587.3 bits), Expect = 4.0e-170, P = 4.0e-170
Identities = 340/473 (71%), Positives = 378/473 (79%)
Query: 106 SVDGNEKIEKSRLDLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITN 165
++DG +K K R D S + +VEMMKERF+KLLLGEDMSG GNGV TALAISNAITN
Sbjct: 54 NIDGEKK--KIRSD-----SRVSEVEMMKERFSKLLLGEDMSGSGNGVCTALAISNAITN 106
Query: 166 LCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRP 225
LCATLFGQLWRLEPLP EKK MWRREMEW LCVSDHIVE+TP+WQTFPDG+KLE+MTCRP
Sbjct: 107 LCATLFGQLWRLEPLPTEKKEMWRREMEWLLCVSDHIVEMTPTWQTFPDGTKLEIMTCRP 166
Query: 226 RSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASE--ADGSTSFRRALQRQEEK 283
RSDLY+NLPALRKLDNMLLEILDSFE TEFWYVDQGI+A E ADGS+SFR++ QRQE+K
Sbjct: 167 RSDLYVNLPALRKLDNMLLEILDSFEETEFWYVDQGIMAHESAADGSSSFRKSFQRQEDK 226
Query: 284 WWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNG 343
WWLPVPRV GGL EN+RKQLQHKRDCTNQILKAAMAINSITLADME+PESY ESLP+ G
Sbjct: 227 WWLPVPRVSPGGLQENSRKQLQHKRDCTNQILKAAMAINSITLADMEIPESYLESLPRKG 286
Query: 344 RVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANXX 403
R LGDLIYRYISSDQFSPE LL+CLDLSSEHQA EIANRVE+++Y+W KRTNSKPA
Sbjct: 287 RSCLGDLIYRYISSDQFSPECLLDCLDLSSEHQAIEIANRVESSIYLWHKRTNSKPATNT 346
Query: 404 XXXXXXXXWGLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVG 463
W +VKE +VD +K EL+ADRAESLLL LKQ FPGLPQT LDMSKIQYNKD+G
Sbjct: 347 KTS-----WEMVKELMVDADKLELMADRAESLLLSLKQRFPGLPQTALDMSKIQYNKDIG 401
Query: 464 KSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSDSFSPMSKG--GMIAHKSISIPYSV 521
KSILESYSRVLESLAFNIVARIDDLL+VDDLT+HS P + G G A KSI++P S
Sbjct: 402 KSILESYSRVLESLAFNIVARIDDLLFVDDLTRHSSDQIPTTLGNNGNDAPKSIAVPVSN 461
Query: 522 PFSSTPYKSAFATPTLSPALVSPAKGDISPFRTSSKIPQRGMGVKKALTDYLS 574
+TP S S V P SP R KIP VK+ LT Y++
Sbjct: 462 --YTTPSYSPSKQELRSSITVPP-----SPSRF--KIPHSS-SVKRVLTAYVT 504
>TAIR|locus:2153684 [details] [associations]
symbol:ROPGEF5 "ROP (rho of plants) guanine nucleotide
exchange factor 5" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002688 GO:GO:0005089 IPI:IPI00529677
RefSeq:NP_196213.2 UniGene:At.50436 ProteinModelPortal:F4K295
SMR:F4K295 EnsemblPlants:AT5G05940.1 GeneID:830479
KEGG:ath:AT5G05940 OMA:DSKPKIC Uniprot:F4K295
Length = 611
Score = 1591 (565.1 bits), Expect = 1.9e-163, P = 1.9e-163
Identities = 329/557 (59%), Positives = 400/557 (71%)
Query: 90 PP---LGWPVQKAEAQDSSSVDGNEKIEKSRLD----LEKKGSTLPDVEMMKERFAKLLL 142
PP LGWP++KA + +S N +K L + K DVEMMKERFAKLLL
Sbjct: 56 PPSQILGWPIRKASFRKNSKESVNFDHKKLTLHDDSGFKAKEMNSADVEMMKERFAKLLL 115
Query: 143 GEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHI 202
GEDMSG G GV TALAISNAITNLCAT+FGQLWRLEPL EKK MWRREMEW L VSDHI
Sbjct: 116 GEDMSGSGKGVCTALAISNAITNLCATIFGQLWRLEPLSSEKKEMWRREMEWILSVSDHI 175
Query: 203 VELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGI 262
VELTPS QT+PDG+K EVMTCRPR DL+INLPALRKLDNMLL+IL SF+ TEFWYVDQGI
Sbjct: 176 VELTPSTQTYPDGNKFEVMTCRPRFDLFINLPALRKLDNMLLDILASFKKTEFWYVDQGI 235
Query: 263 LASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAIN 322
+ASE DGS SFRR +QRQEEKWWLPVPR+ GL E R +L HKR+C QILKAAMAIN
Sbjct: 236 VASENDGSASFRRKIQRQEEKWWLPVPRLAPNGLTEEARTELNHKRECATQILKAAMAIN 295
Query: 323 SITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIAN 382
S+ L +M+VP+SY E+LPKNGR LGD+IYRY++SD+FS E LL+CLDLSSEH A +IAN
Sbjct: 296 SLALTEMDVPKSYLETLPKNGRSCLGDVIYRYVTSDKFSAESLLDCLDLSSEHIALDIAN 355
Query: 383 RVEAAMYVWRKRTNSKPA--NXXXXXXXXXXWGLVKEFVVDTEKRELLADRAESLLLCLK 440
RVEA++YVWR+R +K N W +VKE + +KR LL +R+E+LL CLK
Sbjct: 356 RVEASIYVWRRRVQTKLGVNNNTSSTTPKLTWEMVKELMAAGDKRGLLVERSETLLRCLK 415
Query: 441 QWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSDS 500
Q FP L QT+LD+SKIQ+NKD+GKSILESYSR LESLA NI+ARIDDLLYVDDLTK SD
Sbjct: 416 QRFPSLTQTSLDISKIQWNKDIGKSILESYSRALESLASNIIARIDDLLYVDDLTKQSDD 475
Query: 501 FSPMSK---GGMIAHKSI-SIPYSVPFSSTPYKSAFAT-PTLSPALVSPAKGDI-SPF-- 552
+ +S +IAHK + +PY + S TPY+++F+T P SP+++SP KG+ +P+
Sbjct: 476 NNLLSSPAVSSIIAHKKVVPLPYLISASGTPYRTSFSTTPGFSPSMISPKKGERRTPYSS 535
Query: 553 RTSSKI-----PQRGMGVKKALTDYLSIENKGKDYSNSIDEADSTLNIIREASPSQTETE 607
+ ++KI P RG GV++ L +YL +E+K K N D AD+ +I + S E +
Sbjct: 536 KDTNKIIEKGLPSRGYGVRRVLNNYLGMESKLKICVNPSDNADTA--VINQISKDVEEEK 593
Query: 608 SFECTKKAVSSPTKNRV 624
T P K V
Sbjct: 594 KRNSTSVHQKGPPKYTV 610
>TAIR|locus:2121828 [details] [associations]
symbol:ROPGEF1 "ROP (rho of plants) guanine nucleotide
exchange factor 1" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0009860 "pollen tube
growth" evidence=IMP] [GO:0016324 "apical plasma membrane"
evidence=IDA] [GO:0000271 "polysaccharide biosynthetic process"
evidence=RCA] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0008356 "asymmetric cell division" evidence=RCA]
[GO:0008361 "regulation of cell size" evidence=RCA] [GO:0009825
"multidimensional cell growth" evidence=RCA] [GO:0009926 "auxin
polar transport" evidence=RCA] [GO:0009932 "cell tip growth"
evidence=RCA] [GO:0010015 "root morphogenesis" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010817 "regulation of hormone levels" evidence=RCA]
[GO:0040007 "growth" evidence=RCA] [GO:0043481 "anthocyanin
accumulation in tissues in response to UV light" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] [GO:0071555 "cell
wall organization" evidence=RCA] [GO:0080092 "regulation of pollen
tube growth" evidence=IGI] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016324 GO:GO:0009860 GO:GO:0005089 EMBL:AL161593
GO:GO:0080092 EMBL:AL035539 EMBL:AY056193 EMBL:AY056375
EMBL:AY133649 EMBL:BT000462 EMBL:BT000975 EMBL:AY084995
IPI:IPI00542345 PIR:T05671 RefSeq:NP_195556.1 UniGene:At.2769
ProteinModelPortal:Q93ZY2 SMR:Q93ZY2 DIP:DIP-59393N IntAct:Q93ZY2
STRING:Q93ZY2 PRIDE:Q93ZY2 EnsemblPlants:AT4G38430.1 GeneID:830000
KEGG:ath:AT4G38430 TAIR:At4g38430 eggNOG:NOG263269
HOGENOM:HOG000238290 InParanoid:Q93ZY2 OMA:IEAAVHV PhylomeDB:Q93ZY2
ProtClustDB:CLSN2685422 Genevestigator:Q93ZY2 GermOnline:AT4G38430
Uniprot:Q93ZY2
Length = 548
Score = 1260 (448.6 bits), Expect = 2.2e-128, P = 2.2e-128
Identities = 254/433 (58%), Positives = 317/433 (73%)
Query: 119 DLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLE 178
D ++ + L ++EMMKERFAKLLLGEDMSG G GV TALAISNAITNL AT+FG+LWRLE
Sbjct: 80 DDKQPDNDLSEIEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLE 139
Query: 179 PLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRK 238
PL +KKAMWRRE+EW LCVSD IVEL PS Q FP G E+M RPRSDLY NLPAL+K
Sbjct: 140 PLAPQKKAMWRRELEWLLCVSDSIVELIPSIQQFPGGGTYEIMETRPRSDLYANLPALKK 199
Query: 239 LDNMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHE 298
LD ML+++LD+F +TEFWY D+GI+ + D + A RQE+KWWLP P+VP GL E
Sbjct: 200 LDAMLIDMLDAFSDTEFWYTDRGIVLGDCDKDSYNSPASVRQEDKWWLPCPKVPPNGLSE 259
Query: 299 NTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSD 358
RK+LQ RD NQILKAA+AINS LA+ME+P+ Y E+LPK+G+ LG++IY+Y++++
Sbjct: 260 EARKKLQQCRDFANQILKAALAINSGVLAEMEIPDPYLETLPKSGKECLGEIIYQYLTAN 319
Query: 359 QFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANXXXXXXXXXXWG-LVKE 417
+FSPE LL+CLDLSSEHQ EIANR+EAA++VWR++ + + WG VK
Sbjct: 320 KFSPECLLDCLDLSSEHQTLEIANRIEAAVHVWRQKNGRR--HKKQAKLKLSSWGGKVKG 377
Query: 418 FVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESL 477
V D E+ + L RAE+LL L+ FPGLPQTTLDM+KIQYNKDVG+SILESYSRV+ES+
Sbjct: 378 LVNDNERNDFLVQRAETLLQSLRIRFPGLPQTTLDMNKIQYNKDVGQSILESYSRVMESM 437
Query: 478 AFNIVARIDDLLYVDDLTKHS----DSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFA 533
AFNI ARIDD+LYVDD + S +S S S G+ K+ S+ S+P+ S FA
Sbjct: 438 AFNITARIDDVLYVDDAMRRSISVTESLSLFSINGLNPQKAFSV------QSSPHGSPFA 491
Query: 534 TPTLSPALVSPAK 546
TP LS A SP +
Sbjct: 492 TPALSVASRSPRR 504
>TAIR|locus:2078976 [details] [associations]
symbol:ROPGEF6 "ROP (rho of plants) guanine nucleotide
exchange factor 6" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005089 EMBL:AL161667 HOGENOM:HOG000238290 EMBL:BT020279
EMBL:BT021117 IPI:IPI00546656 PIR:T47705 RefSeq:NP_191125.1
UniGene:At.50282 ProteinModelPortal:Q9M056 SMR:Q9M056 STRING:Q9M056
EnsemblPlants:AT3G55660.1 GeneID:824732 KEGG:ath:AT3G55660
TAIR:At3g55660 eggNOG:NOG267745 InParanoid:Q9M056 OMA:GRNIRER
PhylomeDB:Q9M056 ProtClustDB:CLSN2913345 Genevestigator:Q9M056
Uniprot:Q9M056
Length = 579
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 280/511 (54%), Positives = 352/511 (68%)
Query: 92 LGWPVQKAEAQDSSSVDGNEKIEKSRLD---LEKKGSTLPDVEMMKERFAKLLLGEDMSG 148
LGWP+ + + SS +K +++D ++ G+ ++E++KER AKLLLGEDMSG
Sbjct: 69 LGWPLGQGSWRKSSGK--MKKKTPTKIDDFGFKRVGTETSEIELLKERMAKLLLGEDMSG 126
Query: 149 CGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPS 208
G GV ALAISNAITNL A + GQ WRLEP+P EKK MWRRE+E L VSDHIVEL PS
Sbjct: 127 SGEGVCPALAISNAITNLYAAILGQQWRLEPIPSEKKLMWRREIEVLLSVSDHIVELVPS 186
Query: 209 WQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASEAD 268
+Q FP+G+K+EVM CRPRSDL+ LPALRKLDNML+EILDSF TEFWYVDQGI+A+E+
Sbjct: 187 FQNFPNGNKIEVMNCRPRSDLFTCLPALRKLDNMLIEILDSFGETEFWYVDQGIVAAESA 246
Query: 269 GSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLAD 328
S SFR +KWWLP+PRVP GL E TRK+L H R+ TNQILKA M+INSI LA+
Sbjct: 247 RSNSFRE----DGDKWWLPLPRVPSDGLTEQTRKKLDHTREFTNQILKACMSINSIALAE 302
Query: 329 MEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAM 388
MEVP+SY E+LPKNGR LGD +YR I+SD FS ++LLE +DLSSE E+ANRVEA+M
Sbjct: 303 MEVPQSYLEALPKNGRSCLGDFLYRNITSDNFSADHLLESIDLSSELAVVEMANRVEASM 362
Query: 389 YVWRKRTNSKPANXXXXXXXXXXWGL-VKEFVV---DTEKRELLADRAESLLLCLKQWFP 444
YVWR+R +S+ WG+ VKE ++ D +KRE+ A+RAESLL+ LKQ FP
Sbjct: 363 YVWRRRAHSRHL-ISLYRSTSTRWGMIVKEMMMHQTDGDKREIFAERAESLLIRLKQRFP 421
Query: 445 GLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKH------- 497
GL QT LD SKIQYNKDVGKSILESYSRVLESLA++I RI+++L++DD++K
Sbjct: 422 GLRQTALDTSKIQYNKDVGKSILESYSRVLESLAYSIGVRIEEVLFMDDISKDDGDGDDD 481
Query: 498 --SDSFSPMSK----GGMIA-HKSISIP--YSVPFSSTPYKSAFATP--TLSPALVSPAK 546
SD +SK GG + + +S P +SV FS T +TP TLS + +P+
Sbjct: 482 SCSDKLRLLSKEAASGGSGSLREKLSAPSLFSVSFSGT------STPYRTLSFSASTPS- 534
Query: 547 GDISPFRTSSKIPQRGMGVKKALTDYLSIEN 577
SP S I G G ++A +LS N
Sbjct: 535 --YSPMPLISPI-NGGRGGERA--PFLSGRN 560
>TAIR|locus:2126071 [details] [associations]
symbol:ROPGEF3 "ROP (rho of plants) guanine nucleotide
exchange factor 3" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002687 GO:GO:0005089 HOGENOM:HOG000238290
eggNOG:NOG241756 ProtClustDB:CLSN2682874 EMBL:BT030385
IPI:IPI00891780 RefSeq:NP_001118903.1 UniGene:At.50311
ProteinModelPortal:A4IJ27 SMR:A4IJ27 DNASU:827967
EnsemblPlants:AT4G00460.2 GeneID:827967 KEGG:ath:AT4G00460
TAIR:At4g00460 InParanoid:A4IJ27 OMA:PRSDIYI PhylomeDB:A4IJ27
Genevestigator:A4IJ27 Uniprot:A4IJ27
Length = 473
Score = 1132 (403.5 bits), Expect = 8.2e-115, P = 8.2e-115
Identities = 236/419 (56%), Positives = 307/419 (73%)
Query: 91 PLGWPVQKAEAQDSSSVDGNEKIEKSRLDLEKKGSTLPDVEMMKERFAKLLLGEDMSGCG 150
P WPV E++ S + G E L +++ P++E MKERFAKLLLGEDMSG G
Sbjct: 69 PCNWPVL-TESKSSKCLSGLEMQSNECLVVQEISE--PELETMKERFAKLLLGEDMSGSG 125
Query: 151 NGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQ 210
GV TA+ ISNAITNL AT+FGQ RLEPL EK+A+W+REM L V D+IVE P Q
Sbjct: 126 KGVCTAVTISNAITNLYATVFGQNLRLEPLETEKRALWKREMNCLLSVCDYIVEFIPRCQ 185
Query: 211 TFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASE-ADG 269
+G+ +EVM RPR+D+YINLPALRKLD+ML+E LDSF+NTEFWY ++G L+ + A
Sbjct: 186 NLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALDSFQNTEFWYAEEGSLSMKSARS 245
Query: 270 ST-SFRRAL-QRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLA 327
ST SFR+ + QR+EEKWWLPVP VP GL + RKQL++KR+ TNQI KAAMAINS L+
Sbjct: 246 STGSFRKVIVQRKEEKWWLPVPLVPSEGLSDKARKQLKNKRESTNQIHKAAMAINSSILS 305
Query: 328 DMEVPESYFESLPKNGRVSLGDLIYRYIS-SDQFSPEYLLECLDLSSEHQATEIANRVEA 386
+ME+P+SY +LPK G+ S+GD IYRY+S S +F PE LL+CL++SSEH+A ++A+RVEA
Sbjct: 306 EMEIPDSYMTTLPKCGKSSVGDSIYRYMSGSGRFFPEQLLDCLNISSEHEAVQLADRVEA 365
Query: 387 AMYVWRKRT---NSKPANXXXXXXXXXXWGLVKEFVVDTEKRE---LLADRAESLLLCLK 440
+MY WR+++ NSK + W +VK+ + TE+ + ++A+RAE+LL CLK
Sbjct: 366 SMYTWRRKSCLSNSKNS-----------WNMVKDLMSTTERTDKNYVMAERAETLLFCLK 414
Query: 441 QWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSD 499
Q +P L QT+LD+ KIQYNKDVGK++LESYSRVLE LAFNIVA IDD+LYVD + S+
Sbjct: 415 QRYPELSQTSLDICKIQYNKDVGKAVLESYSRVLEGLAFNIVAWIDDVLYVDKTMRGSE 473
>TAIR|locus:2198220 [details] [associations]
symbol:ROPGEF2 "ROP (rho of plants) guanine nucleotide
exchange factor 2" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005089 EMBL:AC009273 HOGENOM:HOG000238290 IPI:IPI00543460
PIR:A86148 RefSeq:NP_171676.1 UniGene:At.51450
ProteinModelPortal:Q9LQ89 SMR:Q9LQ89 EnsemblPlants:AT1G01700.1
GeneID:839250 KEGG:ath:AT1G01700 TAIR:At1g01700 eggNOG:NOG241756
OMA:ICEYIVE PhylomeDB:Q9LQ89 ProtClustDB:CLSN2682874
Genevestigator:Q9LQ89 GermOnline:AT1G01700 Uniprot:Q9LQ89
Length = 485
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 228/419 (54%), Positives = 297/419 (70%)
Query: 91 PLGWPVQKAEAQDSSSVD-------GNEKIEKSRLDLEKKGSTLPDVEMMKERFAKLLLG 143
P WPV E+ +S+S + + +IE L + + P++E MKERF+KLLLG
Sbjct: 73 PSDWPVL-TESNNSASSNFPTVFDLKHNQIETDE-HLAVQEISEPELETMKERFSKLLLG 130
Query: 144 EDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIV 203
EDMSG G GV TA+ ISNAITNL AT+FGQ RLEPL +E+K W+REM L V D+I
Sbjct: 131 EDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLEIEQKTTWKREMNCLLSVCDYIF 190
Query: 204 ELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGIL 263
E P Q +G+ +EVM RPR+D+YINLPALRKLD+ML+E LDSF+ TEFWY ++G L
Sbjct: 191 EFIPKSQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALDSFQKTEFWYAEEGSL 250
Query: 264 ASEADGST--SFRRAL-QRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMA 320
+ ++ S SFR+ + QR+EEKWWLP+P VPL GL E RKQL+ KR+ TNQI KAAMA
Sbjct: 251 SMKSTRSATGSFRKVIVQRKEEKWWLPIPLVPLQGLSEKARKQLKSKRESTNQIHKAAMA 310
Query: 321 INSITLADMEVPESYFESLPKNGRVSLGDLIYRYI-SSDQFSPEYLLECLDLSSEHQATE 379
INS L +M++P+SY +LPK+G+ S GD IYR++ SS +FSPE LL+ L + SEH+A +
Sbjct: 311 INSSILGEMDIPDSYMATLPKSGKASTGDAIYRHMTSSGRFSPEKLLDRLKIVSEHEALQ 370
Query: 380 IANRVEAAMYVWRKRT---NSKPANXXXXXXXXXXWGLVKEFVVDTEKRE---LLADRAE 433
+A+RVEA+MY WR++ NSK + W +VK+ + TE+ + +LA+RAE
Sbjct: 371 LADRVEASMYTWRRKACLNNSKSS-----------WNMVKDLMSITERSDKNYVLAERAE 419
Query: 434 SLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVD 492
SLL CLKQ +P L QT+LD+ KI NKDVGK++LESYSRVLE LAFNIVA IDD+LYVD
Sbjct: 420 SLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLESYSRVLEGLAFNIVAWIDDVLYVD 478
>TAIR|locus:2050699 [details] [associations]
symbol:ROPGEF4 "ROP (rho of plants) guanine nucleotide
exchange factor 4" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0048767 "root hair elongation" evidence=IMP]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA] [GO:0009531
"secondary cell wall" evidence=IDA] [GO:0009664 "plant-type cell
wall organization" evidence=IMP] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0048767 GO:GO:0005089 GO:GO:0009531
GO:GO:0009664 HOGENOM:HOG000238290 EMBL:AK229390 IPI:IPI00536205
RefSeq:NP_182113.2 UniGene:At.36575 ProteinModelPortal:Q0WNP7
SMR:Q0WNP7 DIP:DIP-59395N PRIDE:Q0WNP7 EnsemblPlants:AT2G45890.1
GeneID:819197 KEGG:ath:AT2G45890 TAIR:At2g45890 InParanoid:Q0WNP7
OMA:LEISSEH PhylomeDB:Q0WNP7 ProtClustDB:CLSN2918276
Genevestigator:Q0WNP7 Uniprot:Q0WNP7
Length = 463
Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
Identities = 202/402 (50%), Positives = 285/402 (70%)
Query: 108 DGNEKIEKSRLDLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLC 167
DG+E E S +D + ++EMM+ERFAKLLLGEDMSG G GV TA+ +SN+ITNL
Sbjct: 78 DGDE--EDSDIDSAEDA----ELEMMRERFAKLLLGEDMSGSGKGVCTAVTVSNSITNLY 131
Query: 168 ATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRS 227
AT+FGQ RL+PL EKK +W+REM F+ + D+IVE+ P ++ G+ +E+ + RS
Sbjct: 132 ATVFGQSLRLQPLSTEKKDLWKREMNCFMSICDYIVEVIP--RSL--GTNVEITETKLRS 187
Query: 228 DLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASEADG----STSFRRAL-QRQEE 282
D+ ++LPALRKLDNML+EILDSF EFWYV++G + + G S +FR+ + QR++E
Sbjct: 188 DILMSLPALRKLDNMLMEILDSFTENEFWYVERGSSSMNSGGGGRDSGTFRKVVVQRKDE 247
Query: 283 KWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKN 342
KWWLPVP VP GL E RK L+HKRDC +QI KAA+AIN TL DM++P+SY +LPK+
Sbjct: 248 KWWLPVPCVPAEGLSEEERKHLRHKRDCASQIHKAALAINDSTLNDMDIPDSYLTTLPKS 307
Query: 343 GRVSLGDLIYRYI-SSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPAN 401
G+ S+GD+IY+ + ++++F P+ LL+ L ++SEH+A E+A++VEA++ WR++T
Sbjct: 308 GKASVGDVIYKQLCTAEKFYPDQLLDILKITSEHEALELADKVEASLVTWRRKTGG---- 363
Query: 402 XXXXXXXXXXWGLVKEFVVDTE----KRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQ 457
W ++K+ D + K +LA RA SLL CLKQ +P L QT+LD+ KIQ
Sbjct: 364 ---LTHSKSSWDMMKDISGDADRGNDKNHILAARARSLLFCLKQRYPELSQTSLDICKIQ 420
Query: 458 YNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSD 499
+N+DVGK++LESYSRVLE LA+N+V+ IDD+LYVD ++ D
Sbjct: 421 FNRDVGKAVLESYSRVLEGLAYNVVSWIDDVLYVDRTVRNRD 462
>TAIR|locus:2180781 [details] [associations]
symbol:ROPGEF10 "ROP (rho of plants) guanine nucleotide
exchange factor 10" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002688 GO:GO:0005089 EMBL:DQ459196
IPI:IPI00518311 RefSeq:NP_197457.1 UniGene:At.54917
ProteinModelPortal:Q1KS66 SMR:Q1KS66 DIP:DIP-59397N
EnsemblPlants:AT5G19560.1 GeneID:832076 KEGG:ath:AT5G19560
TAIR:At5g19560 OMA:HTPEHEL PhylomeDB:Q1KS66 ArrayExpress:Q1KS66
Genevestigator:Q3E7S8 Uniprot:Q1KS66
Length = 493
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 183/369 (49%), Positives = 258/369 (69%)
Query: 129 DVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMW 188
D+E+MKERFAKLLLGEDMSG G G ++ALA+SNAIT L ++FG+ +L+P+ E K W
Sbjct: 44 DMEVMKERFAKLLLGEDMSGGGTGETSALALSNAITKLADSMFGEQMKLQPMYPETKENW 103
Query: 189 RREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 248
R+EM W L V DHIV+ PS Q +G E+M + R DL N+PALRKLD++LLE LD
Sbjct: 104 RKEMGWLLSVIDHIVQFVPSRQMGKNGQFTEIMVTKQRDDLLTNIPALRKLDSVLLETLD 163
Query: 249 SFENT-EFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHK 307
+F++ +FWYV + + +AD + +RR +E WWLPV +VP GL E +R+ LQ++
Sbjct: 164 NFKDQKDFWYVPRDM--EDADHNGDWRR-----DENWWLPVVKVPTDGLSEESRRWLQNQ 216
Query: 308 RDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLE 367
+D Q+LKAA AIN+ L++M VPE+Y +SLPKNG+ SLGD +Y+ I+ + F P+Y +
Sbjct: 217 KDSVAQVLKAATAINAHVLSEMHVPENYIDSLPKNGKTSLGDFLYKSITEESFDPDYFVS 276
Query: 368 CLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANXXXXXXXXXXWGLVKEFVVDTEKREL 427
LDLS+EH+ ++ NR+EA+M +W+++ K + WG V EKREL
Sbjct: 277 FLDLSTEHKVLDLKNRIEASMVIWKRKMCQKEKDGKSQ------WGST----VSLEKREL 326
Query: 428 LADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDD 487
RAE++L+ LKQ FPG+PQ++L++SKI+ NKDVG++ILESYSRVLESLA I++RI+D
Sbjct: 327 FEVRAETILVMLKQQFPGIPQSSLEVSKIKNNKDVGQAILESYSRVLESLASKIMSRIED 386
Query: 488 LLYVDDLTK 496
+L D L +
Sbjct: 387 VLEADRLVQ 395
>TAIR|locus:2093467 [details] [associations]
symbol:ROPGEF13 "ROP (rho of plants) guanine nucleotide
exchange factor 13" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002686 GO:GO:0005089 UniGene:At.25110
UniGene:At.25220 UniGene:At.72250 IPI:IPI00526643
RefSeq:NP_188234.1 ProteinModelPortal:F4J1G1 SMR:F4J1G1
PRIDE:F4J1G1 EnsemblPlants:AT3G16130.1 GeneID:820858
KEGG:ath:AT3G16130 OMA:NSAMAIN ArrayExpress:F4J1G1 Uniprot:F4J1G1
Length = 576
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 186/400 (46%), Positives = 269/400 (67%)
Query: 110 NEKIEKSRLDLEKKG--------STLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISN 161
NEK + ++ L +G + + ++E MK++FAKLLLGEDMSG GVS+ALA+SN
Sbjct: 101 NEKFTRDQVILRFRGLQAKSCYFAYVTELEQMKDKFAKLLLGEDMSGGSKGVSSALALSN 160
Query: 162 AITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVM 221
AITNL A+ FG++ RLE + +KK WRRE+ W L V+DHIVE +P+ QT DGS +EVM
Sbjct: 161 AITNLAASAFGEIRRLEAISEDKKERWRREIGWLLSVTDHIVEFSPTHQTNEDGSSMEVM 220
Query: 222 TCRPRSDLYINLPALRKLDNMLLEILDSFENT-EFWYVDQGILASEADGSTSFRRALQRQ 280
T + R+DL N+P+L+KLD MLL+ LD F++ EF+YV G SE ST R
Sbjct: 221 TTKQRTDLVSNIPSLKKLDEMLLDCLDKFKDQDEFYYVTPGSPESENSNST-------RN 273
Query: 281 EEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLP 340
++KWWLP+ +VP GL E ++ L +R+C Q+L +AMAINS L +ME+PESY +SLP
Sbjct: 274 DDKWWLPIVKVPPKGLSETLKRFLLSQRECVCQVLNSAMAINSQVLTEMEIPESYIDSLP 333
Query: 341 KNGRVSLGDLIYRYISSDQFSPE-YLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKP 399
K GR SLGD+IYR I+ + F E +LLE +DLSSEH+ ++ N+ EA++ +W+++
Sbjct: 334 KKGRASLGDMIYRMITLEMFDAEQFLLE-MDLSSEHKILDLKNKFEASVVIWQRKI---- 388
Query: 400 ANXXXXXXXXXXWGLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYN 459
W + +KR+ L +RA ++L +KQ FPG+ Q+TLD+SKIQ+N
Sbjct: 389 --VQIDNKSSSPWSTN----LSMDKRQQLEERAATILQLIKQEFPGISQSTLDISKIQFN 442
Query: 460 KDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSD 499
+D+G +I+ESYSR+LESLA +++RI+D+L D LT++ +
Sbjct: 443 RDIGLAIVESYSRILESLAHTVMSRIEDVLEADQLTQNPE 482
>TAIR|locus:2028701 [details] [associations]
symbol:ROPGEF14 "ROP (rho of plants) guanine nucleotide
exchange factor 14" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0019344 "cysteine
biosynthetic process" evidence=RCA] [GO:0080092 "regulation of
pollen tube growth" evidence=IGI] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005089 GO:GO:0080092 HOGENOM:HOG000238290 EMBL:AK222010
IPI:IPI00548250 RefSeq:NP_174446.2 UniGene:At.40302
ProteinModelPortal:Q56WM6 SMR:Q56WM6 DIP:DIP-59398N PRIDE:Q56WM6
EnsemblPlants:AT1G31650.1 GeneID:840052 KEGG:ath:AT1G31650
TAIR:At1g31650 eggNOG:NOG282811 InParanoid:Q56WM6 OMA:HIRRSLM
PhylomeDB:Q56WM6 ProtClustDB:CLSN2680344 Genevestigator:Q56WM6
Uniprot:Q56WM6
Length = 576
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 161/375 (42%), Positives = 242/375 (64%)
Query: 129 DVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMW 188
DVE MKE+F+KLLLGED++G GV ALA+SNA+T+L ++FG+LW+LEPL EKK W
Sbjct: 136 DVEAMKEKFSKLLLGEDVTGGCKGVQVALALSNAVTHLATSIFGELWKLEPLCEEKKQKW 195
Query: 189 RREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 248
RREM+W L +++++EL PS Q +G LE+MT + R+D+++NLPAL+KLD+ML+E LD
Sbjct: 196 RREMDWLLSPTNYMIELVPSKQNDANGRSLEIMTPKARADIHMNLPALQKLDSMLIETLD 255
Query: 249 SFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKR 308
S NTEFWY + G A + STS + ++WWLP P+VP GL + RK+L K
Sbjct: 256 SMVNTEFWYSEIGSRAEGKNKSTS-------ESKRWWLPSPQVPKPGLSNSGRKKLLDKG 308
Query: 309 DCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLEC 368
Q+ KA AIN L +M VP E++PK+G+ SLGD +Y+ ++ + + + +
Sbjct: 309 KVVYQVFKATKAINENILLEMPVPIVIKEAIPKSGKNSLGDELYKMLAVESATVDEIFIS 368
Query: 369 LDLSSEHQATEIANRVEAAMYVWRKRTNSKPANXXXXXXXXXXWGLVKEFVVDTEKRELL 428
L+L +EH A E N++E+AM+ W++R + +N W K+ + + + E L
Sbjct: 369 LNLGTEHAALETVNKLESAMFAWKERITEQGSNGKSPVRAS--WSFAKDPLSEIGRNESL 426
Query: 429 ADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDL 488
+RAE+L +K P LP + LD +KIQY+KD+G ++LE+YSR L +LAF I++R+ ++
Sbjct: 427 LNRAEALRTQIKSKHPNLPHSFLDATKIQYDKDIGHAVLEAYSRTLANLAFRILSRMGEI 486
Query: 489 LYVDDLTKHSDSFSP 503
L D L+ + P
Sbjct: 487 LKEDSLSNPNSPAPP 501
>TAIR|locus:2017844 [details] [associations]
symbol:ROPGEF12 "ROP (rho of plants) guanine nucleotide
exchange factor 12" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009860 "pollen tube growth"
evidence=IEP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0080092
"regulation of pollen tube growth" evidence=IGI] InterPro:IPR005512
Pfam:PF03759 PROSITE:PS51334 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009793 GO:GO:0009860
GO:GO:0005089 EMBL:AC011717 GO:GO:0080092 GO:GO:0090406
HOGENOM:HOG000238290 EMBL:BT033042 IPI:IPI00519583 PIR:F96829
RefSeq:NP_178104.1 UniGene:At.50054 ProteinModelPortal:Q9CA89
SMR:Q9CA89 DIP:DIP-46186N STRING:Q9CA89 PaxDb:Q9CA89 PRIDE:Q9CA89
EnsemblPlants:AT1G79860.1 GeneID:844325 KEGG:ath:AT1G79860
TAIR:At1g79860 eggNOG:NOG256984 InParanoid:Q9CA89 OMA:INANILM
PhylomeDB:Q9CA89 ProtClustDB:CLSN2681866 Genevestigator:Q9CA89
Uniprot:Q9CA89
Length = 515
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 138/269 (51%), Positives = 203/269 (75%)
Query: 127 LPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKA 186
L D+E MKERF+KLLLGED SG G GVS+ALA+SNAITNL A++FG+ RLEP+P E++A
Sbjct: 90 LADMEQMKERFSKLLLGEDNSGGGKGVSSALALSNAITNLAASVFGEQRRLEPMPAERRA 149
Query: 187 MWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEI 246
WR+E++W L V+D++VE PS Q DG+ +E+MT R R+DL++N+PAL+KLD ML++
Sbjct: 150 RWRKEIDWLLSVTDYVVEFAPSQQKNKDGTNMEIMTTRQRTDLHMNIPALKKLDAMLIDC 209
Query: 247 LDSFEN-TEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQ 305
L++F++ +EF Y+ + + + DG +R +EKWW+P +VP GL E +R+ LQ
Sbjct: 210 LENFKDQSEFSYISKD--SPDLDG--------KRNDEKWWIPTVKVPPDGLSEASRRFLQ 259
Query: 306 HKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYL 365
+++DC NQ+LKAAMAIN+ L +ME+PESY +SLPKNGR SLGD +Y+ I+ D F P+
Sbjct: 260 YQKDCVNQVLKAAMAINAQVLFEMEIPESYIDSLPKNGRASLGDQMYKNITVDFFDPDQF 319
Query: 366 LECLDLSSEHQATEIANRVEAAMYVWRKR 394
L +D+SSEH+ ++ NR+EA++ +W+++
Sbjct: 320 LSSMDMSSEHKIVDLKNRIEASIIIWKRK 348
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 105/215 (48%), Positives = 155/215 (72%)
Query: 278 QRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFE 337
+R +EKWW+P +VP GL E +R+ LQ+++DC NQ+LKAAMAIN+ L +ME+PESY +
Sbjct: 232 KRNDEKWWIPTVKVPPDGLSEASRRFLQYQKDCVNQVLKAAMAINAQVLFEMEIPESYID 291
Query: 338 SLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNS 397
SLPKNGR SLGD +Y+ I+ D F P+ L +D+SSEH+ ++ NR+EA++ +W+++
Sbjct: 292 SLPKNGRASLGDQMYKNITVDFFDPDQFLSSMDMSSEHKIVDLKNRIEASIIIWKRKMVY 351
Query: 398 KPANXXXXXXXXXXWGLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQ 457
K W V EKRE+ +RAE++LL LKQ +PG+ Q++LD+SKIQ
Sbjct: 352 KDNKSSAP------WASG----VSLEKREVFEERAETILLILKQRYPGISQSSLDISKIQ 401
Query: 458 YNKDVGKSILESYSRVLESLAFNIVARIDDLLYVD 492
+N+DVG+++LESYSR+LESLA+ +++RIDD+L D
Sbjct: 402 FNEDVGQAVLESYSRILESLAYTVLSRIDDVLEAD 436
>TAIR|locus:2091742 [details] [associations]
symbol:ROPGEF8 "ROP (rho of plants) guanine nucleotide
exchange factor 8" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0006944
"cellular membrane fusion" evidence=RCA] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR005512 Pfam:PF03759 PROSITE:PS51334
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005089 EMBL:AB020746
PDB:2WBL PDBsum:2WBL PDB:2NTY PDBsum:2NTY HOGENOM:HOG000238290
EMBL:DQ446693 IPI:IPI00534717 RefSeq:NP_189105.1 UniGene:At.53476
PDB:2NTX PDBsum:2NTX ProteinModelPortal:Q9LV40 SMR:Q9LV40
MINT:MINT-6803377 STRING:Q9LV40 PaxDb:Q9LV40 PRIDE:Q9LV40
EnsemblPlants:AT3G24620.1 GeneID:822058 KEGG:ath:AT3G24620
TAIR:At3g24620 eggNOG:NOG300850 InParanoid:Q9LV40 OMA:MAINADV
PhylomeDB:Q9LV40 ProtClustDB:CLSN2684515 EvolutionaryTrace:Q9LV40
Genevestigator:Q9LV40 Uniprot:Q9LV40
Length = 523
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 142/271 (52%), Positives = 199/271 (73%)
Query: 129 DVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMW 188
D+EMMK+RFAKLLLGEDMSG G GVS+ALA+SNAITNL A++FG+ +L+P+P +++A W
Sbjct: 85 DMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQARW 144
Query: 189 RREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 248
++E++W L V+DHIVE PS QT DG E+M R R DL +N+PALRKLD ML++ LD
Sbjct: 145 KKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLD 204
Query: 249 SFE-NTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHK 307
+F + EFWYV + SE +G + R R +KWWLP +VP GGL E +R+ L +
Sbjct: 205 NFRGHNEFWYVSRD---SE-EGQQA-RN--DRTNDKWWLPPVKVPPGGLSEPSRRMLYFQ 257
Query: 308 RDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLE 367
+D Q+ KAAMAIN+ L++ME+PESY +SLPKNGR SLGD IY+ I+ + F PE L
Sbjct: 258 KDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEWFDPEQFLA 317
Query: 368 CLDLSSEHQATEIANRVEAAMYVWRKRTNSK 398
LD+S+EH+ ++ NR+EA++ +W+++ ++K
Sbjct: 318 MLDMSTEHKVLDLKNRIEASVVIWKRKLHTK 348
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 113/231 (48%), Positives = 161/231 (69%)
Query: 279 RQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFES 338
R +KWWLP +VP GGL E +R+ L ++D Q+ KAAMAIN+ L++ME+PESY +S
Sbjct: 229 RTNDKWWLPPVKVPPGGLSEPSRRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDS 288
Query: 339 LPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSK 398
LPKNGR SLGD IY+ I+ + F PE L LD+S+EH+ ++ NR+EA++ +W+++ ++K
Sbjct: 289 LPKNGRASLGDSIYKSITEEWFDPEQFLAMLDMSTEHKVLDLKNRIEASVVIWKRKLHTK 348
Query: 399 PANXXXXXXXXXXWGLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQY 458
WG V EKREL +RAE++L+ LKQ FPGLPQ++LD+SKIQ+
Sbjct: 349 DTKSS--------WGSA----VSLEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQF 396
Query: 459 NKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLT-KHSDSFSPMSKGG 508
NKDVG+++LESYSR+LESLA+ +++RI+D+LY D L K + S GG
Sbjct: 397 NKDVGQAVLESYSRILESLAYTVMSRIEDVLYTDTLALKQTLLAEETSDGG 447
>TAIR|locus:2119320 [details] [associations]
symbol:ROPGEF9 "ROP (rho of plants) guanine nucleotide
exchange factor 9" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0048610 "cellular process involved in reproduction"
evidence=RCA] [GO:0048868 "pollen tube development" evidence=RCA]
[GO:0080092 "regulation of pollen tube growth" evidence=IGI]
InterPro:IPR005512 Pfam:PF03759 PROSITE:PS51334 EMBL:CP002687
GO:GO:0005089 GO:GO:0080092 EMBL:AL049751 EMBL:AL161535
ProtClustDB:CLSN2684515 EMBL:DQ446830 IPI:IPI00524431 PIR:T07704
RefSeq:NP_193060.1 UniGene:At.54299 ProteinModelPortal:Q9SVQ3
SMR:Q9SVQ3 PRIDE:Q9SVQ3 EnsemblPlants:AT4G13240.1 GeneID:826941
KEGG:ath:AT4G13240 TAIR:At4g13240 InParanoid:Q9SVQ3 OMA:HAVLESY
PhylomeDB:Q9SVQ3 ArrayExpress:Q9SVQ3 Genevestigator:Q9SVQ3
Uniprot:Q9SVQ3
Length = 517
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 144/305 (47%), Positives = 212/305 (69%)
Query: 98 KAEAQDS---SSVDGNEKIEKSRLDLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVS 154
+++ QDS S V+ + + SRL ++ + EMMK+RF KLLLGEDMSG G GVS
Sbjct: 41 ESQTQDSLGGSPVETSRPMT-SRLISRRQDKQQSETEMMKDRFTKLLLGEDMSGGGKGVS 99
Query: 155 TALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPD 214
+ALA+SNAITNL A++FG+ +L+P+ +++A W++E++W L V+DHIVE PS Q +
Sbjct: 100 SALALSNAITNLAASIFGEQTKLQPMAPDRRARWKKEIDWLLSVTDHIVEFVPSQQISKE 159
Query: 215 GSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFE-NTEFWYVDQGILASEADGSTSF 273
G E+M R R DL +N+PALRKLD ML++ LD+F + EFWYV + SE +G +
Sbjct: 160 GVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLDNFRGHNEFWYVSRD---SE-EGKQA- 214
Query: 274 RRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPE 333
R +R ++KWWLP +VP GL E+ R+ L ++D +Q+ KAAMAIN+ L++M +P+
Sbjct: 215 RN--ERTKDKWWLPPVKVPPNGLSESARRMLHFQKDSVSQVQKAAMAINAQVLSEMAIPD 272
Query: 334 SYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRK 393
SY ESLPKNGRVSLGD +Y+ I+ + F PE L LDLS+EH+ ++ NR+EA++ +W++
Sbjct: 273 SYIESLPKNGRVSLGDSLYKSITEEWFDPEQFLSTLDLSTEHKVLDVKNRIEASIVIWKR 332
Query: 394 RTNSK 398
+ + K
Sbjct: 333 KLHLK 337
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 115/239 (48%), Positives = 164/239 (68%)
Query: 278 QRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFE 337
+R ++KWWLP +VP GL E+ R+ L ++D +Q+ KAAMAIN+ L++M +P+SY E
Sbjct: 217 ERTKDKWWLPPVKVPPNGLSESARRMLHFQKDSVSQVQKAAMAINAQVLSEMAIPDSYIE 276
Query: 338 SLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNS 397
SLPKNGRVSLGD +Y+ I+ + F PE L LDLS+EH+ ++ NR+EA++ +W+++ +
Sbjct: 277 SLPKNGRVSLGDSLYKSITEEWFDPEQFLSTLDLSTEHKVLDVKNRIEASIVIWKRKLHL 336
Query: 398 KPANXXXXXXXXXXWGLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQ 457
K WG V EKREL +RAE++L+ LKQ FPGLPQ++LD+SKIQ
Sbjct: 337 KDNKSS--------WGSA----VSLEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQ 384
Query: 458 YNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSDSFSPMSKGGMIAHKSIS 516
YNKDVG ++LESYSR+LESL + ++RIDD+LY D L + + S GG IA ++ S
Sbjct: 385 YNKDVGHAVLESYSRILESLGYTEMSRIDDVLYADSLARKQCTGEETSDGGKIATETDS 443
>TAIR|locus:2018169 [details] [associations]
symbol:ROPGEF11 "ROP (rho of plants) guanine nucleotide
exchange factor 11" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0007017 "microtubule-based
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0080147 "root hair
cell development" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] InterPro:IPR001372 InterPro:IPR005512
Pfam:PF01221 Pfam:PF03759 PROSITE:PS51334 EMBL:CP002684
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 GO:GO:0005089
GO:GO:0007017 GO:GO:0080147 Gene3D:3.30.740.10 SUPFAM:SSF54648
KO:K10418 UniGene:At.25110 IPI:IPI00517707 RefSeq:NP_175634.5
UniGene:At.16831 ProteinModelPortal:F4ICV0 SMR:F4ICV0 PRIDE:F4ICV0
EnsemblPlants:AT1G52240.1 GeneID:841654 KEGG:ath:AT1G52240
OMA:NENSASR ArrayExpress:F4ICV0 Uniprot:F4ICV0
Length = 607
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 142/271 (52%), Positives = 199/271 (73%)
Query: 130 VEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWR 189
+E MKE+F+KLLLGEDMSG G GVS+ALA+SNAITNL A+ FG+ RLEP+ +++K WR
Sbjct: 169 MEQMKEKFSKLLLGEDMSGGGKGVSSALALSNAITNLAASAFGEQRRLEPMAVDRKTRWR 228
Query: 190 REMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDS 249
RE+ W + V+D+IVE P+ QT DG+ +EVM+ R R+DL N+PAL+KLD MLL+ LD
Sbjct: 229 REIGWLISVADYIVEFAPTQQTNKDGTSMEVMSTRQRTDLLCNIPALKKLDAMLLDCLDK 288
Query: 250 FENT-EFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKR 308
F++ EF+YV + D S R +EKWWLP +VP GL E +R+ LQ ++
Sbjct: 289 FKDQDEFYYVKK-------DSPDSCET---RNDEKWWLPAVKVPPNGLSEISRRFLQSQK 338
Query: 309 DCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQF-SPEYLLE 367
+C NQ+LKAAMAIN+ L++ME+PESY ESLPKNGR SLGD+IYR I+ + F + ++L+E
Sbjct: 339 ECVNQVLKAAMAINAQVLSEMEIPESYLESLPKNGRASLGDVIYRMITVEMFDADQFLIE 398
Query: 368 CLDLSSEHQATEIANRVEAAMYVWRKRTNSK 398
+DLSSEH+ ++ NR+EA++ +W+++ K
Sbjct: 399 -MDLSSEHKILDLKNRIEASIVIWKRKMVQK 428
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 115/226 (50%), Positives = 163/226 (72%)
Query: 279 RQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFES 338
R +EKWWLP +VP GL E +R+ LQ +++C NQ+LKAAMAIN+ L++ME+PESY ES
Sbjct: 309 RNDEKWWLPAVKVPPNGLSEISRRFLQSQKECVNQVLKAAMAINAQVLSEMEIPESYLES 368
Query: 339 LPKNGRVSLGDLIYRYISSDQF-SPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNS 397
LPKNGR SLGD+IYR I+ + F + ++L+E +DLSSEH+ ++ NR+EA++ +W+++
Sbjct: 369 LPKNGRASLGDVIYRMITVEMFDADQFLIE-MDLSSEHKILDLKNRIEASIVIWKRKMVQ 427
Query: 398 KPANXXXXXXXXXXWGLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQ 457
K WG V EKRE +RAE++LL LKQ FPG+ Q++LD+SKIQ
Sbjct: 428 KDTKSP--------WGST----VSIEKREQFEERAETILLLLKQGFPGISQSSLDISKIQ 475
Query: 458 YNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSDSFSP 503
+N+DVG +ILESYSRVLESLA +++RI+D+LY D LT+ + +P
Sbjct: 476 FNRDVGLAILESYSRVLESLAHTVMSRIEDVLYADQLTQEPTNNAP 521
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 634 599 0.00085 120 3 11 23 0.44 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 625 (66 KB)
Total size of DFA: 327 KB (2165 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 55.53u 0.12s 55.65t Elapsed: 00:00:02
Total cpu time: 55.53u 0.12s 55.65t Elapsed: 00:00:02
Start: Fri May 10 04:52:35 2013 End: Fri May 10 04:52:37 2013