BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006718
(634 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93ZY2|ROGF1_ARATH Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana
GN=ROPGEF1 PE=1 SV=2
Length = 548
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/434 (58%), Positives = 319/434 (73%), Gaps = 13/434 (2%)
Query: 119 DLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLE 178
D ++ + L ++EMMKERFAKLLLGEDMSG G GV TALAISNAITNL AT+FG+LWRLE
Sbjct: 80 DDKQPDNDLSEIEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLE 139
Query: 179 PLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRK 238
PL +KKAMWRRE+EW LCVSD IVEL PS Q FP G E+M RPRSDLY NLPAL+K
Sbjct: 140 PLAPQKKAMWRRELEWLLCVSDSIVELIPSIQQFPGGGTYEIMETRPRSDLYANLPALKK 199
Query: 239 LDNMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHE 298
LD ML+++LD+F +TEFWY D+GI+ + D + A RQE+KWWLP P+VP GL E
Sbjct: 200 LDAMLIDMLDAFSDTEFWYTDRGIVLGDCDKDSYNSPASVRQEDKWWLPCPKVPPNGLSE 259
Query: 299 NTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSD 358
RK+LQ RD NQILKAA+AINS LA+ME+P+ Y E+LPK+G+ LG++IY+Y++++
Sbjct: 260 EARKKLQQCRDFANQILKAALAINSGVLAEMEIPDPYLETLPKSGKECLGEIIYQYLTAN 319
Query: 359 QFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSW-GLVKE 417
+FSPE LL+CLDLSSEHQ EIANR+EAA++VWR++ + + SSW G VK
Sbjct: 320 KFSPECLLDCLDLSSEHQTLEIANRIEAAVHVWRQKNGRR--HKKQAKLKLSSWGGKVKG 377
Query: 418 FVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESL 477
V D E+ + L RAE+LL L+ FPGLPQTTLDM+KIQYNKDVG+SILESYSRV+ES+
Sbjct: 378 LVNDNERNDFLVQRAETLLQSLRIRFPGLPQTTLDMNKIQYNKDVGQSILESYSRVMESM 437
Query: 478 AFNIVARIDDLLYVDDLTKHS----DSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFA 533
AFNI ARIDD+LYVDD + S +S S S G+ K+ S+ S+P+ S FA
Sbjct: 438 AFNITARIDDVLYVDDAMRRSISVTESLSLFSINGLNPQKAFSV------QSSPHGSPFA 491
Query: 534 TPTLSPALVSPAKG 547
TP LS A SP +
Sbjct: 492 TPALSVASRSPRRA 505
>sp|Q9LQ89|ROGF2_ARATH Rop guanine nucleotide exchange factor 2 OS=Arabidopsis thaliana
GN=ROPGEF2 PE=1 SV=2
Length = 485
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/439 (53%), Positives = 309/439 (70%), Gaps = 27/439 (6%)
Query: 71 SETTG---HEEQSHSSSEESSSPPLGWPVQKAEAQDSSSVD-------GNEKIEKSRLDL 120
SET+G ++ +SS + + P WPV E+ +S+S + + +IE L
Sbjct: 50 SETSGGGFSDQIDETSSFCTEASPSDWPVL-TESNNSASSNFPTVFDLKHNQIETDE-HL 107
Query: 121 EKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPL 180
+ + P++E MKERF+KLLLGEDMSG G GV TA+ ISNAITNL AT+FGQ RLEPL
Sbjct: 108 AVQEISEPELETMKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPL 167
Query: 181 PLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLD 240
+E+K W+REM L V D+I E P Q +G+ +EVM RPR+D+YINLPALRKLD
Sbjct: 168 EIEQKTTWKREMNCLLSVCDYIFEFIPKSQNLSNGATVEVMESRPRADIYINLPALRKLD 227
Query: 241 NMLLEILDSFENTEFWYVDQGILA--SEADGSTSFRRAL-QRQEEKWWLPVPRVPLGGLH 297
+ML+E LDSF+ TEFWY ++G L+ S + SFR+ + QR+EEKWWLP+P VPL GL
Sbjct: 228 SMLMEALDSFQKTEFWYAEEGSLSMKSTRSATGSFRKVIVQRKEEKWWLPIPLVPLQGLS 287
Query: 298 ENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYI-S 356
E RKQL+ KR+ TNQI KAAMAINS L +M++P+SY +LPK+G+ S GD IYR++ S
Sbjct: 288 EKARKQLKSKRESTNQIHKAAMAINSSILGEMDIPDSYMATLPKSGKASTGDAIYRHMTS 347
Query: 357 SDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVK 416
S +FSPE LL+ L + SEH+A ++A+RVEA+MY WR++ ++SKSSW +VK
Sbjct: 348 SGRFSPEKLLDRLKIVSEHEALQLADRVEASMYTWRRK--------ACLNNSKSSWNMVK 399
Query: 417 EFVVDTE---KRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRV 473
+ + TE K +LA+RAESLL CLKQ +P L QT+LD+ KI NKDVGK++LESYSRV
Sbjct: 400 DLMSITERSDKNYVLAERAESLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLESYSRV 459
Query: 474 LESLAFNIVARIDDLLYVD 492
LE LAFNIVA IDD+LYVD
Sbjct: 460 LEGLAFNIVAWIDDVLYVD 478
>sp|Q9LV40|ROGF8_ARATH Rho guanine nucleotide exchange factor 8 OS=Arabidopsis thaliana
GN=ROPGEF8 PE=1 SV=1
Length = 523
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/367 (52%), Positives = 267/367 (72%), Gaps = 20/367 (5%)
Query: 129 DVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMW 188
D+EMMK+RFAKLLLGEDMSG G GVS+ALA+SNAITNL A++FG+ +L+P+P +++A W
Sbjct: 85 DMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQARW 144
Query: 189 RREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 248
++E++W L V+DHIVE PS QT DG E+M R R DL +N+PALRKLD ML++ LD
Sbjct: 145 KKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLD 204
Query: 249 SFE-NTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHK 307
+F + EFWYV + D + R +KWWLP +VP GGL E +R+ L +
Sbjct: 205 NFRGHNEFWYVSR-------DSEEGQQARNDRTNDKWWLPPVKVPPGGLSEPSRRMLYFQ 257
Query: 308 RDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLE 367
+D Q+ KAAMAIN+ L++ME+PESY +SLPKNGR SLGD IY+ I+ + F PE L
Sbjct: 258 KDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEWFDPEQFLA 317
Query: 368 CLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFVVDTEKREL 427
LD+S+EH+ ++ NR+EA++ +W+++ ++K +KSSWG V EKREL
Sbjct: 318 MLDMSTEHKVLDLKNRIEASVVIWKRKLHTK--------DTKSSWG----SAVSLEKREL 365
Query: 428 LADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDD 487
+RAE++L+ LKQ FPGLPQ++LD+SKIQ+NKDVG+++LESYSR+LESLA+ +++RI+D
Sbjct: 366 FEERAETILVLLKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYTVMSRIED 425
Query: 488 LLYVDDL 494
+LY D L
Sbjct: 426 VLYTDTL 432
>sp|Q9VYY4|C4G15_DROME Cytochrome P450 4g15 OS=Drosophila melanogaster GN=Cyp4g15 PE=2
SV=1
Length = 574
Score = 32.7 bits (73), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 57 EKGRESSSSSDFLTSETTGHEEQSHSSSEESSSPPLGWPV-QKAEAQDSSSVDGNEKIEK 115
E+ RE + D T T G +E+ +E +SP G Q A +D V+ N+ EK
Sbjct: 287 EREREQNGGVD-QTPSTAGSDEKDREKDKEKASPVAGLSYGQSAGLKDDLDVEDNDIGEK 345
Query: 116 SR---LDL----EKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTAL 157
R LDL + G+ + D E+ ++ + G D + G+ +L
Sbjct: 346 KRLAFLDLMLESAQNGALITDTEIKEQVDTIMFEGHDTTAAGSSFFLSL 394
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 228,642,382
Number of Sequences: 539616
Number of extensions: 9559381
Number of successful extensions: 28032
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 27432
Number of HSP's gapped (non-prelim): 468
length of query: 634
length of database: 191,569,459
effective HSP length: 124
effective length of query: 510
effective length of database: 124,657,075
effective search space: 63575108250
effective search space used: 63575108250
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)