Query 006722
Match_columns 633
No_of_seqs 342 out of 1513
Neff 5.4
Searched_HMMs 46136
Date Thu Mar 28 13:33:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006722.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006722hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02869 fatty aldehyde decarb 100.0 4E-200 8E-205 1629.2 48.6 616 1-624 1-618 (620)
2 PF12076 Wax2_C: WAX2 C-termin 100.0 1.2E-66 2.6E-71 490.1 11.5 163 455-621 1-164 (164)
3 PRK14982 acyl-ACP reductase; P 100.0 1.1E-39 2.5E-44 345.8 22.2 297 294-623 2-338 (340)
4 COG5322 Predicted dehydrogenas 100.0 2.6E-37 5.6E-42 312.2 14.2 243 369-622 78-350 (351)
5 KOG0873 C-4 sterol methyl oxid 100.0 1.3E-33 2.9E-38 288.1 14.3 205 60-275 45-259 (283)
6 COG3000 ERG3 Sterol desaturase 99.9 3.3E-27 7.1E-32 244.4 17.9 159 126-293 94-254 (271)
7 KOG0872 Sterol C5 desaturase [ 99.9 1.4E-22 3.1E-27 204.9 12.1 142 127-282 128-269 (312)
8 KOG0874 Sphingolipid hydroxyla 99.8 8.1E-21 1.7E-25 187.0 0.7 147 127-283 122-273 (287)
9 PF04116 FA_hydroxylase: Fatty 99.7 4.4E-17 9.5E-22 145.2 8.0 111 133-253 3-114 (114)
10 cd01078 NAD_bind_H4MPT_DH NADP 99.3 5.7E-12 1.2E-16 123.7 11.1 166 434-617 1-194 (194)
11 PLN02434 fatty acid hydroxylas 98.9 4.8E-08 1E-12 99.9 15.4 134 127-276 83-230 (237)
12 COG0300 DltE Short-chain dehyd 97.8 3.5E-05 7.5E-10 80.5 5.8 43 452-494 6-50 (265)
13 COG4221 Short-chain alcohol de 97.7 3.9E-05 8.5E-10 78.8 5.7 43 453-495 7-51 (246)
14 PLN02601 beta-carotene hydroxy 97.6 0.00051 1.1E-08 71.1 10.9 132 117-264 126-272 (303)
15 KOG1014 17 beta-hydroxysteroid 97.5 9.7E-05 2.1E-09 78.2 5.3 42 453-494 50-93 (312)
16 PF01488 Shikimate_DH: Shikima 97.4 0.00024 5.1E-09 66.6 6.1 88 452-544 12-114 (135)
17 TIGR00507 aroE shikimate 5-deh 97.4 0.00052 1.1E-08 71.3 9.2 138 434-575 99-252 (270)
18 KOG0539 Sphingolipid fatty aci 97.2 0.0013 2.9E-08 66.0 8.0 135 130-277 86-234 (240)
19 PRK00258 aroE shikimate 5-dehy 97.1 0.0014 3.1E-08 68.5 8.0 127 433-561 103-248 (278)
20 TIGR02853 spore_dpaA dipicolin 97.1 0.0032 7E-08 66.5 10.3 128 395-541 108-243 (287)
21 PLN02780 ketoreductase/ oxidor 96.9 0.0013 2.8E-08 69.9 5.5 42 453-494 54-97 (320)
22 PRK07424 bifunctional sterol d 96.9 0.0034 7.3E-08 69.5 8.7 135 136-274 17-174 (406)
23 PRK09186 flagellin modificatio 96.8 0.0029 6.4E-08 63.4 7.5 42 453-494 5-48 (256)
24 KOG1205 Predicted dehydrogenas 96.8 0.0022 4.7E-08 67.8 6.7 42 453-494 13-56 (282)
25 PRK06196 oxidoreductase; Provi 96.8 0.0025 5.3E-08 67.0 7.1 55 440-494 14-70 (315)
26 PRK00045 hemA glutamyl-tRNA re 96.8 0.0019 4.1E-08 71.6 6.1 152 451-615 181-360 (423)
27 PF13460 NAD_binding_10: NADH( 96.8 0.0021 4.5E-08 61.5 5.4 35 455-489 1-37 (183)
28 PRK05854 short chain dehydroge 96.7 0.0023 4.9E-08 67.5 5.9 42 453-494 15-58 (313)
29 PRK06101 short chain dehydroge 96.7 0.0023 5E-08 64.2 5.6 41 453-493 2-44 (240)
30 cd01065 NAD_bind_Shikimate_DH 96.7 0.0072 1.6E-07 56.6 8.3 126 435-562 2-144 (155)
31 PRK07063 short chain dehydroge 96.7 0.0028 6.2E-08 64.0 5.9 42 453-494 8-51 (260)
32 PRK08265 short chain dehydroge 96.6 0.0029 6.3E-08 64.4 5.8 43 453-495 7-51 (261)
33 PRK06949 short chain dehydroge 96.6 0.0036 7.8E-08 62.8 6.3 44 451-494 8-53 (258)
34 PRK07890 short chain dehydroge 96.6 0.0032 6.9E-08 63.2 5.9 42 453-494 6-49 (258)
35 PLN03209 translocon at the inn 96.6 0.0035 7.5E-08 72.0 6.6 60 435-494 58-124 (576)
36 PRK06924 short chain dehydroge 96.6 0.0043 9.3E-08 62.1 6.7 41 453-493 2-45 (251)
37 PRK08339 short chain dehydroge 96.6 0.0034 7.5E-08 64.2 5.9 42 453-494 9-52 (263)
38 PRK07825 short chain dehydroge 96.6 0.0035 7.5E-08 63.9 5.8 43 453-495 6-50 (273)
39 PRK05867 short chain dehydroge 96.6 0.0035 7.7E-08 63.1 5.8 43 452-494 9-53 (253)
40 PRK07478 short chain dehydroge 96.5 0.0038 8.3E-08 62.8 5.9 42 453-494 7-50 (254)
41 KOG1208 Dehydrogenases with di 96.5 0.0029 6.4E-08 67.7 5.3 49 447-495 30-80 (314)
42 cd05213 NAD_bind_Glutamyl_tRNA 96.5 0.0058 1.2E-07 65.1 7.3 151 384-544 112-278 (311)
43 PRK05866 short chain dehydroge 96.5 0.0039 8.5E-08 65.1 5.8 42 453-494 41-84 (293)
44 PRK06139 short chain dehydroge 96.5 0.0037 8.1E-08 66.9 5.7 42 453-494 8-51 (330)
45 PRK12548 shikimate 5-dehydroge 96.5 0.0047 1E-07 65.1 6.4 60 434-494 108-173 (289)
46 PRK05872 short chain dehydroge 96.5 0.0043 9.3E-08 64.7 5.9 43 453-495 10-54 (296)
47 PRK08340 glucose-1-dehydrogena 96.5 0.0041 9E-08 63.0 5.6 41 454-494 2-44 (259)
48 PF00106 adh_short: short chai 96.5 0.0049 1.1E-07 57.7 5.7 42 453-494 1-47 (167)
49 PRK07523 gluconate 5-dehydroge 96.4 0.005 1.1E-07 62.0 5.8 42 453-494 11-54 (255)
50 PRK08862 short chain dehydroge 96.4 0.0049 1.1E-07 62.1 5.7 42 453-494 6-49 (227)
51 PRK07454 short chain dehydroge 96.4 0.0093 2E-07 59.5 7.6 42 453-494 7-50 (241)
52 PRK06500 short chain dehydroge 96.4 0.0055 1.2E-07 61.0 5.9 43 453-495 7-51 (249)
53 PRK08085 gluconate 5-dehydroge 96.4 0.0053 1.2E-07 61.8 5.8 43 452-494 9-53 (254)
54 PRK05884 short chain dehydroge 96.4 0.0049 1.1E-07 61.6 5.5 41 454-494 2-44 (223)
55 PRK07024 short chain dehydroge 96.4 0.0051 1.1E-07 62.3 5.7 42 453-494 3-46 (257)
56 PRK06200 2,3-dihydroxy-2,3-dih 96.4 0.0053 1.2E-07 62.2 5.8 42 453-494 7-50 (263)
57 PRK08267 short chain dehydroge 96.4 0.0053 1.1E-07 62.0 5.8 42 453-494 2-45 (260)
58 PRK05876 short chain dehydroge 96.4 0.0052 1.1E-07 63.5 5.8 42 453-494 7-50 (275)
59 TIGR01963 PHB_DH 3-hydroxybuty 96.4 0.0055 1.2E-07 61.1 5.7 42 453-494 2-45 (255)
60 PRK08063 enoyl-(acyl carrier p 96.4 0.0058 1.3E-07 61.0 5.9 42 453-494 5-49 (250)
61 TIGR03325 BphB_TodD cis-2,3-di 96.4 0.0053 1.1E-07 62.3 5.7 42 453-494 6-49 (262)
62 PRK07067 sorbitol dehydrogenas 96.4 0.0056 1.2E-07 61.7 5.8 42 453-494 7-50 (257)
63 PRK12429 3-hydroxybutyrate deh 96.4 0.0058 1.3E-07 61.1 5.8 42 453-494 5-48 (258)
64 PRK05993 short chain dehydroge 96.4 0.0049 1.1E-07 63.4 5.4 41 453-493 5-47 (277)
65 PRK07231 fabG 3-ketoacyl-(acyl 96.3 0.006 1.3E-07 60.7 5.8 42 453-494 6-49 (251)
66 PRK07062 short chain dehydroge 96.3 0.0058 1.3E-07 61.9 5.8 42 453-494 9-52 (265)
67 cd01080 NAD_bind_m-THF_DH_Cycl 96.3 0.022 4.9E-07 55.8 9.6 88 437-543 27-120 (168)
68 PRK06482 short chain dehydroge 96.3 0.0057 1.2E-07 62.4 5.7 42 453-494 3-46 (276)
69 PRK08643 acetoin reductase; Va 96.3 0.0061 1.3E-07 61.3 5.8 42 453-494 3-46 (256)
70 PRK08703 short chain dehydroge 96.3 0.0064 1.4E-07 60.6 5.9 42 453-494 7-50 (239)
71 COG1086 Predicted nucleoside-d 96.3 0.013 2.9E-07 66.7 8.9 118 394-528 171-320 (588)
72 PRK07453 protochlorophyllide o 96.3 0.0062 1.3E-07 64.1 5.8 43 453-495 7-51 (322)
73 PRK06194 hypothetical protein; 96.3 0.0063 1.4E-07 62.4 5.7 42 453-494 7-50 (287)
74 PRK07326 short chain dehydroge 96.3 0.0071 1.5E-07 59.9 5.9 42 453-494 7-50 (237)
75 PRK12742 oxidoreductase; Provi 96.3 0.0076 1.7E-07 59.7 6.1 43 453-495 7-52 (237)
76 PRK08251 short chain dehydroge 96.3 0.007 1.5E-07 60.5 5.8 42 453-494 3-46 (248)
77 PRK07109 short chain dehydroge 96.3 0.0064 1.4E-07 64.9 5.8 42 453-494 9-52 (334)
78 PLN00203 glutamyl-tRNA reducta 96.3 0.012 2.7E-07 67.0 8.4 212 385-614 199-448 (519)
79 PRK05476 S-adenosyl-L-homocyst 96.3 0.042 9E-07 61.4 12.3 139 451-595 211-372 (425)
80 PRK08306 dipicolinate synthase 96.2 0.021 4.5E-07 60.6 9.5 87 452-542 152-244 (296)
81 PRK08017 oxidoreductase; Provi 96.2 0.0067 1.5E-07 60.8 5.5 40 453-492 3-44 (256)
82 PRK06057 short chain dehydroge 96.2 0.0074 1.6E-07 60.9 5.8 42 453-494 8-51 (255)
83 PRK06197 short chain dehydroge 96.2 0.0073 1.6E-07 63.0 5.8 42 453-494 17-60 (306)
84 PRK05599 hypothetical protein; 96.2 0.0072 1.6E-07 61.1 5.6 40 454-494 2-43 (246)
85 PRK06124 gluconate 5-dehydroge 96.2 0.008 1.7E-07 60.5 5.9 44 451-494 10-55 (256)
86 PRK06180 short chain dehydroge 96.2 0.0071 1.5E-07 62.1 5.6 42 453-494 5-48 (277)
87 PRK08416 7-alpha-hydroxysteroi 96.2 0.008 1.7E-07 61.0 5.8 42 453-494 9-53 (260)
88 PRK08213 gluconate 5-dehydroge 96.2 0.0083 1.8E-07 60.6 5.9 42 453-494 13-56 (259)
89 PRK08589 short chain dehydroge 96.2 0.008 1.7E-07 61.7 5.7 41 453-494 7-49 (272)
90 PRK10538 malonic semialdehyde 96.2 0.0088 1.9E-07 60.2 5.9 41 454-494 2-44 (248)
91 PRK07677 short chain dehydroge 96.2 0.0087 1.9E-07 60.3 5.8 42 453-494 2-45 (252)
92 PRK07102 short chain dehydroge 96.1 0.0086 1.9E-07 59.9 5.7 42 453-494 2-45 (243)
93 PRK09072 short chain dehydroge 96.1 0.0089 1.9E-07 60.6 5.9 42 453-494 6-49 (263)
94 PRK07035 short chain dehydroge 96.1 0.0089 1.9E-07 60.0 5.8 42 453-494 9-52 (252)
95 PRK07832 short chain dehydroge 96.1 0.0087 1.9E-07 61.2 5.8 42 453-494 1-44 (272)
96 TIGR01035 hemA glutamyl-tRNA r 96.1 0.01 2.3E-07 65.7 6.9 157 452-616 180-358 (417)
97 PRK12549 shikimate 5-dehydroge 96.1 0.018 3.8E-07 60.8 8.1 137 434-575 109-265 (284)
98 TIGR01289 LPOR light-dependent 96.1 0.0087 1.9E-07 63.2 5.8 43 453-495 4-49 (314)
99 PRK06182 short chain dehydroge 96.1 0.0083 1.8E-07 61.3 5.5 40 453-492 4-45 (273)
100 PRK06172 short chain dehydroge 96.1 0.0097 2.1E-07 59.8 5.8 42 453-494 8-51 (253)
101 PRK08277 D-mannonate oxidoredu 96.1 0.0095 2.1E-07 60.9 5.8 42 453-494 11-54 (278)
102 PRK09291 short chain dehydroge 96.1 0.0098 2.1E-07 59.7 5.8 41 453-493 3-45 (257)
103 PRK07814 short chain dehydroge 96.1 0.01 2.2E-07 60.3 5.9 42 453-494 11-54 (263)
104 PRK07774 short chain dehydroge 96.1 0.01 2.3E-07 59.2 5.8 42 453-494 7-50 (250)
105 PRK12939 short chain dehydroge 96.1 0.011 2.3E-07 58.9 5.8 42 453-494 8-51 (250)
106 PRK05650 short chain dehydroge 96.0 0.01 2.2E-07 60.5 5.8 42 453-494 1-44 (270)
107 PRK07074 short chain dehydroge 96.0 0.01 2.3E-07 59.7 5.8 42 453-494 3-46 (257)
108 PRK13394 3-hydroxybutyrate deh 96.0 0.01 2.2E-07 59.5 5.8 42 453-494 8-51 (262)
109 PRK07904 short chain dehydroge 96.0 0.009 1.9E-07 60.9 5.4 42 453-494 9-54 (253)
110 PRK05717 oxidoreductase; Valid 96.0 0.011 2.3E-07 59.7 5.8 42 453-494 11-54 (255)
111 PRK06947 glucose-1-dehydrogena 96.0 0.011 2.4E-07 59.0 5.9 42 453-494 3-47 (248)
112 PRK09242 tropinone reductase; 96.0 0.011 2.4E-07 59.6 5.8 42 453-494 10-53 (257)
113 PRK12829 short chain dehydroge 96.0 0.011 2.4E-07 59.4 5.8 42 453-494 12-55 (264)
114 TIGR01500 sepiapter_red sepiap 96.0 0.011 2.4E-07 59.9 5.8 41 454-494 2-48 (256)
115 PRK12826 3-ketoacyl-(acyl-carr 96.0 0.012 2.5E-07 58.6 5.8 42 453-494 7-50 (251)
116 PRK05875 short chain dehydroge 96.0 0.011 2.4E-07 60.2 5.8 42 453-494 8-51 (276)
117 PRK06141 ornithine cyclodeamin 96.0 0.1 2.2E-06 55.8 13.2 136 399-539 62-220 (314)
118 PRK12828 short chain dehydroge 96.0 0.012 2.6E-07 57.9 5.7 41 453-493 8-50 (239)
119 PRK06125 short chain dehydroge 96.0 0.012 2.6E-07 59.6 5.9 42 453-494 8-51 (259)
120 PRK05693 short chain dehydroge 96.0 0.01 2.2E-07 60.6 5.5 41 453-493 2-44 (274)
121 PRK12384 sorbitol-6-phosphate 96.0 0.012 2.5E-07 59.4 5.8 42 453-494 3-46 (259)
122 PRK06935 2-deoxy-D-gluconate 3 95.9 0.011 2.4E-07 59.7 5.5 42 452-494 15-58 (258)
123 PRK05786 fabG 3-ketoacyl-(acyl 95.9 0.013 2.7E-07 58.2 5.8 42 453-494 6-49 (238)
124 PRK06914 short chain dehydroge 95.9 0.013 2.8E-07 59.9 5.8 42 453-494 4-47 (280)
125 TIGR02415 23BDH acetoin reduct 95.9 0.013 2.9E-07 58.6 5.8 42 453-494 1-44 (254)
126 PRK12746 short chain dehydroge 95.9 0.014 3E-07 58.6 5.9 42 453-494 7-51 (254)
127 COG0702 Predicted nucleoside-d 95.9 0.014 3E-07 58.8 5.9 38 454-491 2-41 (275)
128 PRK12936 3-ketoacyl-(acyl-carr 95.9 0.014 3E-07 57.9 5.8 42 453-494 7-50 (245)
129 PLN02253 xanthoxin dehydrogena 95.9 0.013 2.9E-07 59.9 5.8 42 453-494 19-62 (280)
130 PRK08945 putative oxoacyl-(acy 95.9 0.014 2.9E-07 58.6 5.6 42 453-494 13-56 (247)
131 PRK08263 short chain dehydroge 95.8 0.014 3E-07 59.8 5.7 42 453-494 4-47 (275)
132 PRK07666 fabG 3-ketoacyl-(acyl 95.8 0.015 3.2E-07 57.9 5.8 42 453-494 8-51 (239)
133 PRK08177 short chain dehydroge 95.8 0.011 2.4E-07 58.6 4.9 39 453-491 2-42 (225)
134 PRK06138 short chain dehydroge 95.8 0.015 3.2E-07 58.1 5.8 42 453-494 6-49 (252)
135 PRK05653 fabG 3-ketoacyl-(acyl 95.8 0.015 3.2E-07 57.4 5.7 42 453-494 6-49 (246)
136 COG0169 AroE Shikimate 5-dehyd 95.8 0.026 5.7E-07 59.7 7.9 139 433-578 105-267 (283)
137 PRK07097 gluconate 5-dehydroge 95.8 0.017 3.6E-07 58.8 6.3 46 449-494 7-54 (265)
138 TIGR03206 benzo_BadH 2-hydroxy 95.8 0.016 3.4E-07 57.8 5.9 42 453-494 4-47 (250)
139 PRK08303 short chain dehydroge 95.8 0.013 2.8E-07 61.9 5.4 42 453-494 9-62 (305)
140 PRK06113 7-alpha-hydroxysteroi 95.8 0.016 3.4E-07 58.5 5.8 42 453-494 12-55 (255)
141 PRK09135 pteridine reductase; 95.8 0.017 3.6E-07 57.4 5.8 42 453-494 7-51 (249)
142 PRK08642 fabG 3-ketoacyl-(acyl 95.7 0.017 3.8E-07 57.6 5.9 42 453-494 6-50 (253)
143 PRK06953 short chain dehydroge 95.7 0.015 3.3E-07 57.5 5.4 40 453-492 2-43 (222)
144 PRK12747 short chain dehydroge 95.7 0.017 3.7E-07 58.0 5.8 42 453-494 5-49 (252)
145 PRK07831 short chain dehydroge 95.7 0.017 3.8E-07 58.4 5.9 42 453-494 18-62 (262)
146 PLN02730 enoyl-[acyl-carrier-p 95.7 0.014 2.9E-07 62.2 5.2 42 453-494 10-54 (303)
147 PRK12825 fabG 3-ketoacyl-(acyl 95.7 0.018 3.9E-07 56.8 5.7 42 453-494 7-51 (249)
148 TIGR02685 pter_reduc_Leis pter 95.7 0.017 3.7E-07 58.9 5.7 42 453-494 2-46 (267)
149 PRK07340 ornithine cyclodeamin 95.7 0.12 2.6E-06 55.0 12.3 141 399-544 62-223 (304)
150 PRK12743 oxidoreductase; Provi 95.7 0.019 4.1E-07 58.1 5.8 42 453-494 3-47 (256)
151 PRK06484 short chain dehydroge 95.7 0.016 3.5E-07 64.9 5.9 44 452-495 269-314 (520)
152 PRK07576 short chain dehydroge 95.7 0.019 4.1E-07 58.7 5.9 43 452-494 9-53 (264)
153 PRK07775 short chain dehydroge 95.7 0.019 4.1E-07 59.0 5.9 42 453-494 11-54 (274)
154 CHL00194 ycf39 Ycf39; Provisio 95.6 0.025 5.4E-07 59.6 6.8 38 454-491 2-41 (317)
155 KOG0725 Reductases with broad 95.6 0.019 4.1E-07 60.2 5.8 42 453-494 9-52 (270)
156 PRK06181 short chain dehydroge 95.6 0.02 4.2E-07 57.9 5.8 42 453-494 2-45 (263)
157 TIGR00518 alaDH alanine dehydr 95.6 0.046 1E-06 59.8 9.0 89 453-544 168-272 (370)
158 PRK07060 short chain dehydroge 95.6 0.022 4.9E-07 56.5 6.0 42 453-494 10-53 (245)
159 PRK13940 glutamyl-tRNA reducta 95.6 0.015 3.2E-07 64.7 5.1 214 384-616 115-354 (414)
160 PRK05557 fabG 3-ketoacyl-(acyl 95.5 0.022 4.8E-07 56.2 5.7 42 453-494 6-50 (248)
161 PRK12937 short chain dehydroge 95.5 0.023 4.9E-07 56.5 5.8 42 453-494 6-50 (245)
162 PRK07069 short chain dehydroge 95.5 0.019 4.1E-07 57.3 5.2 40 455-494 2-44 (251)
163 PRK08618 ornithine cyclodeamin 95.5 0.14 3.1E-06 54.8 12.3 137 399-538 64-221 (325)
164 TIGR01832 kduD 2-deoxy-D-gluco 95.5 0.019 4.2E-07 57.3 5.3 29 453-481 6-34 (248)
165 PRK08594 enoyl-(acyl carrier p 95.5 0.021 4.6E-07 58.3 5.7 42 453-494 8-56 (257)
166 PLN02986 cinnamyl-alcohol dehy 95.5 0.027 5.9E-07 59.0 6.5 38 453-490 6-45 (322)
167 PRK07985 oxidoreductase; Provi 95.5 0.021 4.7E-07 59.6 5.7 41 453-493 50-94 (294)
168 PRK14175 bifunctional 5,10-met 95.5 0.052 1.1E-06 57.6 8.5 165 382-566 43-263 (286)
169 PRK06720 hypothetical protein; 95.5 0.026 5.6E-07 55.0 5.8 42 453-494 17-60 (169)
170 PRK06463 fabG 3-ketoacyl-(acyl 95.5 0.022 4.7E-07 57.5 5.4 40 453-492 8-50 (255)
171 PRK08628 short chain dehydroge 95.4 0.021 4.6E-07 57.5 5.3 40 453-493 8-49 (258)
172 PRK08264 short chain dehydroge 95.4 0.018 3.8E-07 57.2 4.6 37 453-489 7-46 (238)
173 PLN02520 bifunctional 3-dehydr 95.4 0.056 1.2E-06 61.9 9.1 42 453-495 380-423 (529)
174 PRK08278 short chain dehydroge 95.4 0.023 4.9E-07 58.4 5.5 33 453-485 7-41 (273)
175 PRK12481 2-deoxy-D-gluconate 3 95.4 0.023 4.9E-07 57.6 5.4 29 453-481 9-37 (251)
176 PRK08217 fabG 3-ketoacyl-(acyl 95.4 0.027 5.9E-07 56.0 5.8 42 453-494 6-49 (253)
177 PRK06123 short chain dehydroge 95.4 0.027 5.8E-07 56.2 5.8 42 453-494 3-47 (248)
178 PRK08936 glucose-1-dehydrogena 95.4 0.028 6E-07 56.9 5.8 42 453-494 8-52 (261)
179 PRK07806 short chain dehydroge 95.3 0.028 6.1E-07 56.1 5.8 42 453-494 7-51 (248)
180 PRK06841 short chain dehydroge 95.3 0.027 5.9E-07 56.5 5.7 34 453-486 16-51 (255)
181 PRK06114 short chain dehydroge 95.3 0.027 5.9E-07 56.8 5.7 42 453-494 9-53 (254)
182 PRK12823 benD 1,6-dihydroxycyc 95.3 0.028 6.1E-07 56.7 5.6 41 453-494 9-51 (260)
183 cd01075 NAD_bind_Leu_Phe_Val_D 95.3 0.084 1.8E-06 52.9 9.0 82 453-538 29-115 (200)
184 PTZ00075 Adenosylhomocysteinas 95.3 0.075 1.6E-06 60.0 9.4 193 384-599 201-419 (476)
185 PLN02662 cinnamyl-alcohol dehy 95.3 0.033 7.2E-07 58.0 6.3 34 453-486 5-40 (322)
186 PRK09730 putative NAD(P)-bindi 95.3 0.031 6.7E-07 55.5 5.8 42 453-494 2-46 (247)
187 PRK12935 acetoacetyl-CoA reduc 95.3 0.031 6.7E-07 55.8 5.8 42 453-494 7-51 (247)
188 PRK08159 enoyl-(acyl carrier p 95.2 0.031 6.7E-07 57.7 5.8 43 453-495 11-60 (272)
189 PRK12745 3-ketoacyl-(acyl-carr 95.2 0.032 6.9E-07 55.9 5.7 41 453-493 3-46 (256)
190 PRK06483 dihydromonapterin red 95.2 0.031 6.6E-07 55.7 5.5 34 453-486 3-38 (236)
191 PRK14192 bifunctional 5,10-met 95.2 0.085 1.8E-06 55.9 9.1 119 388-542 109-234 (283)
192 PRK08415 enoyl-(acyl carrier p 95.2 0.033 7.1E-07 57.8 5.9 43 453-495 6-55 (274)
193 PF05368 NmrA: NmrA-like famil 95.2 0.042 9.1E-07 54.9 6.5 39 455-493 1-43 (233)
194 PRK06179 short chain dehydroge 95.2 0.02 4.4E-07 58.1 4.3 35 453-487 5-41 (270)
195 PRK09134 short chain dehydroge 95.2 0.033 7.2E-07 56.3 5.8 42 453-494 10-54 (258)
196 TIGR01831 fabG_rel 3-oxoacyl-( 95.2 0.027 5.8E-07 56.0 5.0 40 455-494 1-43 (239)
197 PRK06079 enoyl-(acyl carrier p 95.2 0.032 7E-07 56.6 5.7 40 453-493 8-51 (252)
198 PRK07041 short chain dehydroge 95.2 0.025 5.3E-07 55.9 4.7 39 456-494 1-41 (230)
199 PRK06484 short chain dehydroge 95.2 0.03 6.4E-07 62.8 5.8 43 453-495 6-50 (520)
200 PRK06505 enoyl-(acyl carrier p 95.1 0.032 7E-07 57.6 5.6 43 453-495 8-57 (271)
201 PRK05565 fabG 3-ketoacyl-(acyl 95.1 0.036 7.9E-07 54.9 5.7 42 453-494 6-50 (247)
202 PRK08219 short chain dehydroge 95.1 0.031 6.8E-07 54.7 5.2 41 453-494 4-46 (227)
203 PRK06128 oxidoreductase; Provi 95.1 0.035 7.7E-07 57.9 5.7 29 453-481 56-84 (300)
204 cd05212 NAD_bind_m-THF_DH_Cycl 95.1 0.093 2E-06 50.1 8.0 72 449-538 25-100 (140)
205 PLN00141 Tic62-NAD(P)-related 95.0 0.027 5.8E-07 57.2 4.6 38 453-490 18-57 (251)
206 PRK07889 enoyl-(acyl carrier p 95.0 0.036 7.8E-07 56.5 5.5 42 453-494 8-55 (256)
207 PRK07791 short chain dehydroge 95.0 0.037 8E-07 57.5 5.7 42 453-494 7-59 (286)
208 PRK12827 short chain dehydroge 95.0 0.041 9E-07 54.5 5.8 42 453-494 7-54 (249)
209 PRK05855 short chain dehydroge 95.0 0.035 7.6E-07 62.2 5.8 42 453-494 316-359 (582)
210 PRK06198 short chain dehydroge 95.0 0.038 8.2E-07 55.6 5.5 42 453-494 7-51 (260)
211 PLN02896 cinnamyl-alcohol dehy 95.0 0.041 8.9E-07 58.7 6.0 47 447-493 5-53 (353)
212 PRK07856 short chain dehydroge 94.9 0.029 6.3E-07 56.5 4.5 34 453-486 7-42 (252)
213 PRK06046 alanine dehydrogenase 94.9 0.34 7.3E-06 52.1 12.9 140 398-543 65-228 (326)
214 PRK00676 hemA glutamyl-tRNA re 94.9 0.04 8.7E-07 59.7 5.7 139 384-544 109-266 (338)
215 PRK08690 enoyl-(acyl carrier p 94.9 0.037 8E-07 56.6 5.2 42 453-494 7-55 (261)
216 PRK12550 shikimate 5-dehydroge 94.9 0.053 1.2E-06 57.0 6.4 119 434-561 105-243 (272)
217 PRK07201 short chain dehydroge 94.9 0.038 8.2E-07 63.7 5.8 42 453-494 372-415 (657)
218 PRK06603 enoyl-(acyl carrier p 94.9 0.046 9.9E-07 55.9 5.8 42 453-494 9-57 (260)
219 PF03446 NAD_binding_2: NAD bi 94.8 0.03 6.5E-07 53.8 4.1 107 453-563 2-125 (163)
220 PRK12938 acetyacetyl-CoA reduc 94.8 0.05 1.1E-06 54.3 5.8 29 453-481 4-32 (246)
221 PF02719 Polysacc_synt_2: Poly 94.8 0.032 7E-07 59.3 4.6 40 455-494 1-43 (293)
222 PRK08226 short chain dehydroge 94.8 0.046 1E-06 55.2 5.6 33 453-485 7-41 (263)
223 PRK07792 fabG 3-ketoacyl-(acyl 94.8 0.055 1.2E-06 56.9 6.3 42 453-494 13-57 (306)
224 PLN02968 Probable N-acetyl-gam 94.8 0.039 8.4E-07 60.7 5.2 133 451-594 37-196 (381)
225 COG0373 HemA Glutamyl-tRNA red 94.8 0.11 2.3E-06 57.8 8.6 91 451-544 177-279 (414)
226 PRK12744 short chain dehydroge 94.7 0.048 1E-06 55.1 5.6 29 453-481 9-37 (257)
227 PLN02989 cinnamyl-alcohol dehy 94.7 0.069 1.5E-06 55.9 6.9 38 453-490 6-45 (325)
228 TIGR01829 AcAcCoA_reduct aceto 94.7 0.057 1.2E-06 53.4 5.9 42 453-494 1-45 (242)
229 PRK06997 enoyl-(acyl carrier p 94.7 0.049 1.1E-06 55.7 5.5 42 453-494 7-55 (260)
230 PRK07023 short chain dehydroge 94.7 0.033 7.3E-07 55.6 4.2 33 453-485 2-36 (243)
231 PRK06523 short chain dehydroge 94.7 0.037 7.9E-07 55.8 4.4 33 453-485 10-44 (260)
232 TIGR01809 Shik-DH-AROM shikima 94.6 0.074 1.6E-06 56.0 6.7 129 434-563 105-260 (282)
233 PRK07577 short chain dehydroge 94.6 0.036 7.9E-07 54.7 4.2 33 453-485 4-38 (234)
234 PF01118 Semialdhyde_dh: Semia 94.6 0.031 6.6E-07 51.2 3.3 95 454-554 1-109 (121)
235 PRK07424 bifunctional sterol d 94.6 0.05 1.1E-06 60.3 5.6 37 453-489 179-217 (406)
236 PRK06077 fabG 3-ketoacyl-(acyl 94.6 0.064 1.4E-06 53.5 5.9 29 453-481 7-35 (252)
237 PRK09310 aroDE bifunctional 3- 94.6 0.12 2.7E-06 58.4 8.8 60 434-494 314-375 (477)
238 PLN00015 protochlorophyllide r 94.4 0.046 9.9E-07 57.4 4.7 40 456-495 1-43 (308)
239 TIGR02622 CDP_4_6_dhtase CDP-g 94.4 0.079 1.7E-06 56.4 6.5 38 453-490 5-44 (349)
240 PF10727 Rossmann-like: Rossma 94.4 0.05 1.1E-06 51.1 4.4 69 453-524 11-85 (127)
241 PRK06398 aldose dehydrogenase; 94.4 0.04 8.6E-07 56.1 4.1 34 453-486 7-42 (258)
242 TIGR03649 ergot_EASG ergot alk 94.3 0.033 7.1E-07 57.3 3.3 34 454-487 1-36 (285)
243 PRK08993 2-deoxy-D-gluconate 3 94.3 0.063 1.4E-06 54.3 5.3 29 453-481 11-39 (253)
244 PRK07533 enoyl-(acyl carrier p 94.3 0.068 1.5E-06 54.5 5.5 42 453-494 11-59 (258)
245 PRK06701 short chain dehydroge 94.3 0.07 1.5E-06 55.7 5.7 41 453-493 47-90 (290)
246 TIGR02632 RhaD_aldol-ADH rhamn 94.3 0.063 1.4E-06 63.2 5.8 42 453-494 415-458 (676)
247 PLN02686 cinnamoyl-CoA reducta 94.2 0.063 1.4E-06 58.2 5.4 40 452-491 53-94 (367)
248 PRK14027 quinate/shikimate deh 94.2 0.12 2.6E-06 54.6 7.3 61 433-494 108-171 (283)
249 COG3967 DltE Short-chain dehyd 94.2 0.074 1.6E-06 54.2 5.3 44 453-498 6-51 (245)
250 PRK07984 enoyl-(acyl carrier p 94.2 0.074 1.6E-06 54.8 5.6 41 453-493 7-54 (262)
251 PLN02583 cinnamoyl-CoA reducta 94.2 0.072 1.6E-06 55.6 5.5 31 453-483 7-39 (297)
252 TIGR01472 gmd GDP-mannose 4,6- 94.2 0.097 2.1E-06 55.5 6.5 29 453-481 1-29 (343)
253 TIGR03589 PseB UDP-N-acetylglu 94.2 0.073 1.6E-06 56.5 5.6 42 453-494 5-50 (324)
254 TIGR02992 ectoine_eutC ectoine 94.1 0.11 2.4E-06 55.7 6.9 114 420-538 86-224 (326)
255 PRK14194 bifunctional 5,10-met 94.1 0.11 2.3E-06 55.7 6.5 167 382-566 44-267 (301)
256 PRK12749 quinate/shikimate deh 94.1 0.11 2.4E-06 55.0 6.7 60 434-494 106-171 (288)
257 PRK07370 enoyl-(acyl carrier p 94.1 0.079 1.7E-06 54.1 5.4 29 453-481 7-37 (258)
258 COG0451 WcaG Nucleoside-diphos 94.0 0.032 7E-07 57.3 2.5 101 454-588 2-108 (314)
259 PRK06940 short chain dehydroge 94.0 0.09 1.9E-06 54.3 5.7 40 453-494 3-44 (275)
260 PRK06171 sorbitol-6-phosphate 94.0 0.056 1.2E-06 54.8 4.1 34 453-486 10-45 (266)
261 PLN02650 dihydroflavonol-4-red 94.0 0.065 1.4E-06 57.0 4.7 40 453-492 6-47 (351)
262 COG2085 Predicted dinucleotide 93.9 0.22 4.7E-06 50.7 8.0 161 455-630 3-184 (211)
263 TIGR02371 ala_DH_arch alanine 93.8 0.92 2E-05 48.8 13.2 141 398-542 64-226 (325)
264 COG1028 FabG Dehydrogenases wi 93.7 0.1 2.2E-06 52.3 5.3 43 452-494 5-51 (251)
265 PRK12367 short chain dehydroge 93.7 0.081 1.8E-06 54.2 4.7 32 453-484 15-48 (245)
266 PF00670 AdoHcyase_NAD: S-aden 93.6 0.25 5.4E-06 48.4 7.6 89 453-543 24-115 (162)
267 PRK08655 prephenate dehydrogen 93.6 0.22 4.9E-06 55.7 8.3 84 454-539 2-93 (437)
268 PRK08324 short chain dehydroge 93.6 0.1 2.2E-06 61.3 5.9 43 453-495 423-467 (681)
269 KOG1200 Mitochondrial/plastidi 93.5 0.13 2.8E-06 52.1 5.5 45 453-497 15-61 (256)
270 TIGR01830 3oxo_ACP_reduc 3-oxo 93.5 0.1 2.3E-06 51.3 4.9 40 455-494 1-43 (239)
271 PLN02214 cinnamoyl-CoA reducta 93.5 0.2 4.3E-06 53.6 7.4 34 453-486 11-46 (342)
272 PLN00198 anthocyanidin reducta 93.4 0.1 2.2E-06 55.2 5.1 40 449-488 6-47 (338)
273 COG2910 Putative NADH-flavin r 93.4 0.24 5.1E-06 49.8 7.1 142 454-596 2-201 (211)
274 PRK12824 acetoacetyl-CoA reduc 93.4 0.15 3.2E-06 50.6 5.8 31 453-483 3-35 (245)
275 PRK07589 ornithine cyclodeamin 93.3 0.99 2.1E-05 49.3 12.3 140 399-543 66-230 (346)
276 KOG1370 S-adenosylhomocysteine 93.3 0.22 4.7E-06 53.4 7.0 155 453-610 214-395 (434)
277 PRK06823 ornithine cyclodeamin 93.2 1.1 2.5E-05 48.1 12.6 140 399-543 64-227 (315)
278 PRK08261 fabG 3-ketoacyl-(acyl 93.2 0.15 3.2E-06 56.5 5.9 43 453-495 211-257 (450)
279 PRK14193 bifunctional 5,10-met 93.1 0.22 4.8E-06 52.9 6.9 166 382-566 43-264 (284)
280 PRK06407 ornithine cyclodeamin 93.1 0.62 1.3E-05 49.7 10.3 133 399-543 62-217 (301)
281 PLN02778 3,5-epimerase/4-reduc 93.1 0.15 3.2E-06 53.7 5.6 48 446-493 2-52 (298)
282 PRK14178 bifunctional 5,10-met 93.0 0.37 8.1E-06 51.1 8.4 151 382-552 37-237 (279)
283 PRK06199 ornithine cyclodeamin 93.0 0.78 1.7E-05 50.6 11.2 149 399-556 92-278 (379)
284 PRK06550 fabG 3-ketoacyl-(acyl 93.0 0.1 2.2E-06 51.7 3.9 29 453-481 6-34 (235)
285 PRK08291 ectoine utilization p 92.9 0.25 5.4E-06 53.1 7.0 45 449-494 129-177 (330)
286 PRK14185 bifunctional 5,10-met 92.9 0.92 2E-05 48.5 11.1 142 382-542 42-236 (293)
287 PF10520 Kua-UEV1_localn: Kua- 92.8 0.2 4.2E-06 49.8 5.6 51 217-272 102-155 (178)
288 PRK09496 trkA potassium transp 92.8 0.42 9.1E-06 52.7 8.9 85 397-494 178-274 (453)
289 PF13561 adh_short_C2: Enoyl-( 92.7 0.15 3.3E-06 51.1 4.8 36 459-494 1-44 (241)
290 PRK14189 bifunctional 5,10-met 92.7 0.27 5.8E-06 52.3 6.8 152 384-553 45-245 (285)
291 TIGR00561 pntA NAD(P) transhyd 92.7 0.37 8E-06 55.1 8.3 132 453-594 165-336 (511)
292 TIGR01746 Thioester-redct thio 92.6 0.14 3.1E-06 53.4 4.7 32 454-485 1-36 (367)
293 PRK14187 bifunctional 5,10-met 92.6 0.27 5.8E-06 52.5 6.6 164 384-566 45-268 (294)
294 PRK08220 2,3-dihydroxybenzoate 92.5 0.14 3.1E-06 51.1 4.3 29 453-481 9-37 (252)
295 PF02826 2-Hacid_dh_C: D-isome 92.5 0.45 9.8E-06 46.5 7.7 82 453-539 37-128 (178)
296 PRK14173 bifunctional 5,10-met 92.5 0.31 6.7E-06 51.9 6.9 143 382-542 40-230 (287)
297 TIGR01505 tartro_sem_red 2-hyd 92.2 0.36 7.9E-06 50.5 7.1 85 455-543 2-98 (291)
298 KOG1209 1-Acyl dihydroxyaceton 92.2 0.2 4.3E-06 51.4 4.8 44 452-495 7-53 (289)
299 PRK12859 3-ketoacyl-(acyl-carr 92.2 0.25 5.4E-06 50.1 5.7 29 453-481 7-37 (256)
300 PRK12490 6-phosphogluconate de 92.2 0.5 1.1E-05 49.9 8.1 108 454-564 2-126 (299)
301 PF02737 3HCDH_N: 3-hydroxyacy 92.2 0.28 6E-06 48.3 5.8 40 454-494 1-42 (180)
302 PRK14180 bifunctional 5,10-met 92.1 0.41 8.9E-06 50.8 7.3 165 383-566 43-262 (282)
303 PRK12748 3-ketoacyl-(acyl-carr 92.1 0.25 5.4E-06 49.9 5.5 29 453-481 6-36 (256)
304 COG1090 Predicted nucleoside-d 92.0 0.14 2.9E-06 54.2 3.5 66 455-523 1-71 (297)
305 PRK08309 short chain dehydroge 91.9 0.3 6.4E-06 48.1 5.6 40 454-494 2-43 (177)
306 PRK14190 bifunctional 5,10-met 91.8 0.41 8.8E-06 50.9 6.9 153 382-553 43-245 (284)
307 PLN02695 GDP-D-mannose-3',5'-e 91.8 0.19 4E-06 54.6 4.5 29 453-481 22-50 (370)
308 TIGR01915 npdG NADPH-dependent 91.8 0.3 6.5E-06 49.2 5.7 40 454-493 2-43 (219)
309 PRK14171 bifunctional 5,10-met 91.8 0.39 8.4E-06 51.2 6.7 165 383-566 44-264 (288)
310 PF03807 F420_oxidored: NADP o 91.8 0.49 1.1E-05 40.8 6.3 41 454-495 1-47 (96)
311 cd05311 NAD_bind_2_malic_enz N 91.7 0.5 1.1E-05 48.3 7.2 112 453-568 26-161 (226)
312 cd08295 double_bond_reductase_ 91.7 0.47 1E-05 50.1 7.3 59 439-497 137-199 (338)
313 TIGR00872 gnd_rel 6-phosphoglu 91.7 0.8 1.7E-05 48.4 9.0 104 454-560 2-121 (298)
314 smart00822 PKS_KR This enzymat 91.7 0.17 3.7E-06 46.5 3.5 34 453-486 1-37 (180)
315 PRK14176 bifunctional 5,10-met 91.6 0.54 1.2E-05 50.1 7.5 150 385-552 52-249 (287)
316 PRK07417 arogenate dehydrogena 91.6 0.51 1.1E-05 49.3 7.3 86 454-543 2-96 (279)
317 PRK09009 C factor cell-cell si 91.6 0.19 4.1E-06 49.9 3.9 28 454-481 2-31 (235)
318 KOG4169 15-hydroxyprostaglandi 91.6 0.27 5.9E-06 50.8 5.0 41 453-493 6-51 (261)
319 cd08270 MDR4 Medium chain dehy 91.5 0.76 1.6E-05 47.1 8.4 87 452-539 133-223 (305)
320 PRK14179 bifunctional 5,10-met 91.5 0.32 6.9E-06 51.7 5.7 165 383-566 44-263 (284)
321 PRK14170 bifunctional 5,10-met 91.4 0.45 9.8E-06 50.6 6.7 152 382-552 42-243 (284)
322 PLN02494 adenosylhomocysteinas 91.4 1.6 3.4E-05 49.6 11.3 191 384-597 201-418 (477)
323 PLN02657 3,8-divinyl protochlo 91.3 0.25 5.4E-06 54.2 4.8 36 451-486 59-96 (390)
324 PRK15461 NADH-dependent gamma- 91.3 0.52 1.1E-05 49.8 7.0 161 454-621 3-199 (296)
325 PRK11559 garR tartronate semia 91.2 0.65 1.4E-05 48.6 7.7 86 454-543 4-101 (296)
326 PRK15181 Vi polysaccharide bio 91.2 0.5 1.1E-05 50.5 7.0 29 453-481 16-44 (348)
327 PLN03154 putative allyl alcoho 91.1 0.58 1.3E-05 50.2 7.3 61 437-497 142-206 (348)
328 PRK14172 bifunctional 5,10-met 91.1 0.51 1.1E-05 50.0 6.7 151 384-553 45-244 (278)
329 cd08294 leukotriene_B4_DH_like 91.1 0.74 1.6E-05 47.8 7.9 44 453-497 145-190 (329)
330 PLN02516 methylenetetrahydrofo 91.0 0.51 1.1E-05 50.5 6.6 141 383-542 51-242 (299)
331 PRK14177 bifunctional 5,10-met 91.0 0.52 1.1E-05 50.1 6.7 146 384-552 46-241 (284)
332 cd08293 PTGR2 Prostaglandin re 91.0 0.65 1.4E-05 48.8 7.5 86 453-538 156-254 (345)
333 TIGR03466 HpnA hopanoid-associ 91.0 0.17 3.7E-06 52.4 3.1 34 454-487 2-37 (328)
334 TIGR01777 yfcH conserved hypot 90.9 0.17 3.6E-06 51.5 2.9 33 455-487 1-35 (292)
335 PRK14186 bifunctional 5,10-met 90.9 0.54 1.2E-05 50.3 6.7 141 383-542 44-233 (297)
336 PLN02653 GDP-mannose 4,6-dehyd 90.8 0.23 5E-06 52.6 3.9 29 453-481 7-35 (340)
337 PRK14169 bifunctional 5,10-met 90.8 0.57 1.2E-05 49.8 6.7 167 382-566 41-261 (282)
338 PRK14191 bifunctional 5,10-met 90.8 0.57 1.2E-05 49.8 6.7 165 383-566 43-262 (285)
339 PRK10675 UDP-galactose-4-epime 90.7 0.31 6.8E-06 51.2 4.8 28 454-481 2-29 (338)
340 PRK14188 bifunctional 5,10-met 90.7 0.49 1.1E-05 50.6 6.2 144 382-542 43-233 (296)
341 PRK14166 bifunctional 5,10-met 90.7 0.59 1.3E-05 49.7 6.7 166 382-566 41-262 (282)
342 PF02882 THF_DHG_CYH_C: Tetrah 90.4 0.54 1.2E-05 45.9 5.7 94 440-553 19-124 (160)
343 COG0287 TyrA Prephenate dehydr 90.4 0.41 8.9E-06 50.7 5.3 63 453-516 4-70 (279)
344 PRK14184 bifunctional 5,10-met 90.3 0.71 1.5E-05 49.2 7.0 164 384-566 44-265 (286)
345 cd08289 MDR_yhfp_like Yhfp put 90.3 0.72 1.6E-05 47.8 7.0 99 439-538 129-243 (326)
346 PLN02427 UDP-apiose/xylose syn 90.3 0.35 7.7E-06 52.3 4.8 43 449-491 11-56 (386)
347 TIGR00936 ahcY adenosylhomocys 90.2 1.5 3.2E-05 49.0 9.6 160 430-596 172-356 (406)
348 PRK14183 bifunctional 5,10-met 90.2 0.71 1.5E-05 49.0 6.8 166 382-566 42-262 (281)
349 PRK06300 enoyl-(acyl carrier p 90.1 0.4 8.6E-06 51.0 4.9 29 453-481 9-39 (299)
350 COG1748 LYS9 Saccharopine dehy 90.1 0.41 8.9E-06 53.0 5.1 87 453-541 2-102 (389)
351 PF02423 OCD_Mu_crystall: Orni 90.1 1.6 3.4E-05 46.8 9.4 141 398-544 64-230 (313)
352 PRK14182 bifunctional 5,10-met 89.9 0.75 1.6E-05 48.9 6.7 165 383-566 42-262 (282)
353 PRK14168 bifunctional 5,10-met 89.9 0.73 1.6E-05 49.3 6.6 142 382-542 44-240 (297)
354 KOG1502 Flavonol reductase/cin 89.8 0.36 7.7E-06 52.2 4.3 39 451-489 5-45 (327)
355 PLN02572 UDP-sulfoquinovose sy 89.8 0.31 6.8E-06 54.4 4.0 29 453-481 48-76 (442)
356 PF01210 NAD_Gly3P_dh_N: NAD-d 89.7 0.64 1.4E-05 44.5 5.6 39 454-493 1-41 (157)
357 PRK10217 dTDP-glucose 4,6-dehy 89.7 0.3 6.4E-06 51.9 3.6 29 453-481 2-30 (355)
358 PF03435 Saccharop_dh: Sacchar 89.6 0.39 8.4E-06 52.3 4.5 39 455-494 1-43 (386)
359 PLN02616 tetrahydrofolate dehy 89.6 0.69 1.5E-05 50.7 6.3 142 382-542 114-306 (364)
360 PF01370 Epimerase: NAD depend 89.6 0.47 1E-05 46.6 4.7 27 455-481 1-27 (236)
361 PRK09599 6-phosphogluconate de 89.6 1 2.3E-05 47.5 7.6 107 454-563 2-125 (301)
362 TIGR01179 galE UDP-glucose-4-e 89.5 0.38 8.2E-06 49.6 4.1 28 454-481 1-28 (328)
363 PRK10792 bifunctional 5,10-met 89.5 0.95 2.1E-05 48.2 7.1 142 382-542 44-234 (285)
364 PRK07578 short chain dehydroge 89.5 0.35 7.6E-06 47.0 3.6 30 454-484 2-33 (199)
365 smart00859 Semialdhyde_dh Semi 89.4 0.94 2E-05 41.1 6.2 83 454-538 1-99 (122)
366 PRK14167 bifunctional 5,10-met 89.4 0.84 1.8E-05 48.9 6.6 140 384-542 44-236 (297)
367 PRK14874 aspartate-semialdehyd 89.4 0.24 5.2E-06 53.4 2.7 127 454-597 3-143 (334)
368 cd05288 PGDH Prostaglandin deh 89.4 1 2.3E-05 46.7 7.3 44 453-496 147-192 (329)
369 KOG1203 Predicted dehydrogenas 89.3 0.49 1.1E-05 52.7 5.0 42 451-492 78-121 (411)
370 PRK14181 bifunctional 5,10-met 89.1 1.4 3E-05 47.1 8.0 143 382-542 37-232 (287)
371 KOG1201 Hydroxysteroid 17-beta 89.1 0.86 1.9E-05 48.7 6.4 42 453-494 39-82 (300)
372 PLN02240 UDP-glucose 4-epimera 88.9 0.44 9.5E-06 50.4 4.1 29 453-481 6-34 (352)
373 PRK00141 murD UDP-N-acetylmura 88.9 1.1 2.3E-05 50.6 7.4 75 445-522 7-86 (473)
374 KOG1210 Predicted 3-ketosphing 88.8 0.66 1.4E-05 49.9 5.3 53 442-494 23-77 (331)
375 COG0604 Qor NADPH:quinone redu 88.6 1.1 2.4E-05 48.2 7.0 58 440-498 129-190 (326)
376 PRK11199 tyrA bifunctional cho 88.5 0.43 9.4E-06 52.3 3.9 37 446-482 92-128 (374)
377 cd08259 Zn_ADH5 Alcohol dehydr 88.3 1.3 2.8E-05 45.8 7.1 40 453-492 164-205 (332)
378 PLN00016 RNA-binding protein; 88.2 0.47 1E-05 51.4 3.9 36 451-486 51-92 (378)
379 TIGR01181 dTDP_gluc_dehyt dTDP 88.2 0.44 9.5E-06 48.9 3.5 28 454-481 1-30 (317)
380 PF08659 KR: KR domain; Inter 88.2 0.91 2E-05 44.2 5.6 30 454-483 2-34 (181)
381 PLN02383 aspartate semialdehyd 88.1 0.4 8.6E-06 52.2 3.3 127 453-597 8-153 (344)
382 cd08243 quinone_oxidoreductase 88.1 1.4 3E-05 45.1 7.1 99 439-538 128-238 (320)
383 PRK08125 bifunctional UDP-gluc 88.0 1.2 2.5E-05 52.4 7.2 54 433-486 281-352 (660)
384 cd05280 MDR_yhdh_yhfp Yhdh and 87.9 1.4 3E-05 45.5 7.1 44 452-496 147-192 (325)
385 PLN02897 tetrahydrofolate dehy 87.9 1 2.2E-05 49.1 6.2 138 386-542 101-289 (345)
386 PRK00436 argC N-acetyl-gamma-g 87.8 0.73 1.6E-05 50.0 5.1 90 453-548 3-103 (343)
387 PLN02166 dTDP-glucose 4,6-dehy 87.7 0.6 1.3E-05 52.2 4.4 36 446-481 110-149 (436)
388 TIGR02825 B4_12hDH leukotriene 87.6 1.4 3E-05 46.2 6.9 86 453-539 140-238 (325)
389 TIGR01214 rmlD dTDP-4-dehydror 87.5 0.54 1.2E-05 48.1 3.7 28 454-481 1-28 (287)
390 COG2130 Putative NADP-dependen 87.5 1.4 3E-05 47.4 6.7 97 430-526 127-238 (340)
391 PRK09260 3-hydroxybutyryl-CoA 87.4 0.92 2E-05 47.5 5.4 40 453-493 2-43 (288)
392 PRK11150 rfaD ADP-L-glycero-D- 87.1 0.5 1.1E-05 49.1 3.2 27 455-481 2-28 (308)
393 PRK07502 cyclohexadienyl dehyd 87.1 2.3 5E-05 44.9 8.2 86 453-541 7-103 (307)
394 PLN02206 UDP-glucuronate decar 87.0 0.66 1.4E-05 52.0 4.3 29 453-481 120-148 (442)
395 cd08253 zeta_crystallin Zeta-c 87.0 2.5 5.3E-05 43.0 8.1 43 453-496 146-190 (325)
396 cd08249 enoyl_reductase_like e 86.9 5.2 0.00011 42.3 10.8 86 452-538 155-254 (339)
397 PRK07819 3-hydroxybutyryl-CoA 86.9 0.97 2.1E-05 47.7 5.2 42 451-493 4-47 (286)
398 COG3268 Uncharacterized conser 86.8 0.72 1.6E-05 50.1 4.2 43 453-495 7-51 (382)
399 PRK13243 glyoxylate reductase; 86.6 1.7 3.7E-05 47.0 7.0 81 453-539 151-241 (333)
400 COG4693 PchG Oxidoreductase (N 86.6 0.53 1.2E-05 49.9 3.0 52 445-496 57-117 (361)
401 TIGR01850 argC N-acetyl-gamma- 86.5 0.91 2E-05 49.3 4.9 88 454-548 2-103 (346)
402 PRK11908 NAD-dependent epimera 86.5 0.96 2.1E-05 48.1 5.0 38 453-490 2-42 (347)
403 cd08255 2-desacetyl-2-hydroxye 86.3 3.3 7.2E-05 42.0 8.6 84 453-538 99-190 (277)
404 COG2423 Predicted ornithine cy 86.0 4.3 9.3E-05 44.2 9.7 153 398-558 66-251 (330)
405 PLN02996 fatty acyl-CoA reduct 86.0 1.5 3.3E-05 49.7 6.6 23 453-475 12-34 (491)
406 cd00401 AdoHcyase S-adenosyl-L 86.0 4.1 8.9E-05 45.6 9.7 104 431-540 180-291 (413)
407 PRK06522 2-dehydropantoate 2-r 85.9 1.2 2.5E-05 46.4 5.2 39 454-493 2-42 (304)
408 PRK12480 D-lactate dehydrogena 85.9 2.5 5.5E-05 45.7 7.9 79 453-539 147-235 (330)
409 TIGR01296 asd_B aspartate-semi 85.9 0.34 7.4E-06 52.5 1.2 128 454-597 1-141 (339)
410 PF00056 Ldh_1_N: lactate/mala 85.8 1.8 3.9E-05 41.0 5.9 41 454-494 2-46 (141)
411 PLN03139 formate dehydrogenase 85.7 2.1 4.5E-05 47.5 7.2 100 453-556 200-322 (386)
412 PRK08293 3-hydroxybutyryl-CoA 85.7 1.4 3E-05 46.2 5.6 41 452-493 3-45 (287)
413 cd03514 CrtR_beta-carotene-hyd 85.7 8.9 0.00019 38.7 11.2 45 215-259 141-188 (207)
414 KOG1207 Diacetyl reductase/L-x 85.6 1.3 2.8E-05 44.4 4.9 42 453-494 8-51 (245)
415 PRK09496 trkA potassium transp 85.6 1.1 2.4E-05 49.4 5.1 41 454-495 2-44 (453)
416 PRK14174 bifunctional 5,10-met 85.6 2.2 4.8E-05 45.7 7.1 142 382-542 42-238 (295)
417 TIGR03026 NDP-sugDHase nucleot 85.5 3.3 7.1E-05 45.8 8.7 109 454-564 2-160 (411)
418 PRK07688 thiamine/molybdopteri 85.5 1.2 2.7E-05 48.3 5.3 40 452-492 24-66 (339)
419 PRK06035 3-hydroxyacyl-CoA deh 85.3 1.5 3.2E-05 46.0 5.6 41 452-493 3-45 (291)
420 PLN02503 fatty acyl-CoA reduct 85.3 1.8 4E-05 50.6 6.8 24 452-475 119-142 (605)
421 PRK07530 3-hydroxybutyryl-CoA 85.1 1.5 3.3E-05 45.9 5.6 40 453-493 5-46 (292)
422 TIGR02197 heptose_epim ADP-L-g 85.0 0.87 1.9E-05 47.0 3.7 27 455-481 1-28 (314)
423 TIGR02823 oxido_YhdH putative 84.8 2.5 5.4E-05 43.8 7.0 84 454-538 148-241 (323)
424 PTZ00354 alcohol dehydrogenase 84.8 1.9 4.1E-05 44.6 6.1 43 453-496 142-186 (334)
425 cd08288 MDR_yhdh Yhdh putative 84.7 2.8 6.2E-05 43.4 7.4 44 452-496 147-192 (324)
426 cd01079 NAD_bind_m-THF_DH NAD 84.4 2.1 4.5E-05 43.3 5.9 84 451-538 61-156 (197)
427 cd05191 NAD_bind_amino_acid_DH 84.4 2.1 4.5E-05 36.8 5.2 30 451-481 22-52 (86)
428 PRK12491 pyrroline-5-carboxyla 84.3 3.3 7.1E-05 43.5 7.7 82 454-539 4-98 (272)
429 PF01262 AlaDh_PNT_C: Alanine 84.3 2.7 5.8E-05 40.7 6.5 87 453-543 21-143 (168)
430 PF01113 DapB_N: Dihydrodipico 84.2 1.3 2.8E-05 41.0 4.1 28 454-481 2-30 (124)
431 PRK01438 murD UDP-N-acetylmura 83.9 2.6 5.7E-05 47.2 7.2 69 453-523 17-91 (480)
432 PRK14618 NAD(P)H-dependent gly 83.8 3.7 8E-05 43.8 7.9 89 453-543 5-110 (328)
433 TIGR01692 HIBADH 3-hydroxyisob 83.8 2.8 6.1E-05 44.0 6.9 102 460-563 3-121 (288)
434 PRK10084 dTDP-glucose 4,6 dehy 83.8 0.96 2.1E-05 48.0 3.4 27 454-480 2-28 (352)
435 PRK13771 putative alcohol dehy 83.7 3.9 8.4E-05 42.7 7.9 54 439-492 149-205 (334)
436 PLN02928 oxidoreductase family 83.7 3.1 6.7E-05 45.3 7.4 83 453-539 160-263 (347)
437 PRK08664 aspartate-semialdehyd 83.5 1.7 3.6E-05 47.3 5.2 34 453-486 4-40 (349)
438 PRK11880 pyrroline-5-carboxyla 83.5 2.6 5.7E-05 43.3 6.5 41 454-495 4-49 (267)
439 PRK06476 pyrroline-5-carboxyla 83.5 2.9 6.3E-05 43.0 6.7 83 454-538 2-93 (258)
440 cd01076 NAD_bind_1_Glu_DH NAD( 83.5 6.7 0.00015 40.3 9.3 75 453-528 32-127 (227)
441 PRK05671 aspartate-semialdehyd 83.5 0.69 1.5E-05 50.2 2.3 123 453-596 5-144 (336)
442 cd05286 QOR2 Quinone oxidoredu 83.5 5.2 0.00011 40.4 8.5 43 453-496 138-182 (320)
443 PRK06129 3-hydroxyacyl-CoA deh 83.4 1.9 4.1E-05 45.7 5.5 39 453-492 3-43 (308)
444 cd08292 ETR_like_2 2-enoyl thi 83.3 2.9 6.3E-05 43.2 6.8 85 453-538 141-238 (324)
445 PRK00066 ldh L-lactate dehydro 83.2 2 4.2E-05 46.2 5.6 43 451-494 5-51 (315)
446 cd08250 Mgc45594_like Mgc45594 83.1 3.3 7.1E-05 43.1 7.1 86 453-539 141-238 (329)
447 PF02254 TrkA_N: TrkA-N domain 83.1 2.4 5.3E-05 37.6 5.3 38 455-493 1-40 (116)
448 cd08268 MDR2 Medium chain dehy 83.0 2.6 5.6E-05 43.0 6.1 86 453-539 146-244 (328)
449 smart00829 PKS_ER Enoylreducta 82.8 3.6 7.7E-05 40.9 6.9 43 453-496 106-150 (288)
450 PRK13656 trans-2-enoyl-CoA red 82.7 2.5 5.3E-05 47.1 6.1 40 441-481 21-71 (398)
451 PRK09987 dTDP-4-dehydrorhamnos 82.6 1.2 2.5E-05 46.8 3.5 27 454-481 2-28 (299)
452 PRK06130 3-hydroxybutyryl-CoA 82.3 2.3 5E-05 44.8 5.6 40 453-493 5-46 (311)
453 COG0686 Ald Alanine dehydrogen 82.3 4.2 9.1E-05 44.1 7.4 90 453-544 169-273 (371)
454 cd08296 CAD_like Cinnamyl alco 82.1 3.9 8.4E-05 43.1 7.2 42 453-496 165-208 (333)
455 cd05276 p53_inducible_oxidored 82.0 3.9 8.5E-05 41.4 7.0 43 453-496 141-185 (323)
456 PF01073 3Beta_HSD: 3-beta hyd 82.0 1.6 3.5E-05 45.8 4.3 26 456-481 1-28 (280)
457 PRK05579 bifunctional phosphop 81.9 1.5 3.2E-05 48.9 4.1 96 363-481 116-233 (399)
458 cd05282 ETR_like 2-enoyl thioe 81.7 3.6 7.8E-05 42.4 6.7 43 453-496 140-184 (323)
459 cd05291 HicDH_like L-2-hydroxy 81.6 2.1 4.6E-05 45.4 5.1 41 453-494 1-45 (306)
460 TIGR03201 dearomat_had 6-hydro 81.6 4.1 8.8E-05 43.4 7.2 43 453-497 168-212 (349)
461 cd08244 MDR_enoyl_red Possible 81.5 4.6 0.0001 41.6 7.4 86 453-539 144-242 (324)
462 cd08297 CAD3 Cinnamyl alcohol 81.1 4.6 0.0001 42.3 7.4 99 439-538 152-265 (341)
463 KOG1478 3-keto sterol reductas 81.0 2.5 5.5E-05 44.6 5.1 92 453-563 4-104 (341)
464 cd03510 Rhizobitoxine-FADS-lik 81.0 8.6 0.00019 37.8 8.7 85 153-257 71-163 (175)
465 PLN02545 3-hydroxybutyryl-CoA 80.9 2.9 6.3E-05 43.9 5.7 39 452-491 4-44 (295)
466 COG1484 DnaC DNA replication p 80.9 5.2 0.00011 41.7 7.5 86 431-519 81-176 (254)
467 TIGR02817 adh_fam_1 zinc-bindi 80.8 3.6 7.9E-05 42.9 6.4 44 452-496 149-195 (336)
468 PRK09424 pntA NAD(P) transhydr 80.7 4.9 0.00011 46.2 7.8 88 452-542 165-288 (509)
469 PRK09880 L-idonate 5-dehydroge 80.7 4.5 9.7E-05 43.0 7.2 44 453-498 171-217 (343)
470 cd05195 enoyl_red enoyl reduct 80.7 5.7 0.00012 39.4 7.5 41 453-493 110-152 (293)
471 PRK07574 formate dehydrogenase 80.6 5.2 0.00011 44.4 7.8 83 453-539 193-285 (385)
472 cd08239 THR_DH_like L-threonin 80.6 4.4 9.5E-05 42.6 7.0 56 440-497 151-210 (339)
473 TIGR02354 thiF_fam2 thiamine b 80.4 1.9 4.1E-05 43.3 4.0 28 453-481 22-50 (200)
474 cd08246 crotonyl_coA_red croto 80.2 4.8 0.0001 43.5 7.3 43 453-496 195-239 (393)
475 TIGR02824 quinone_pig3 putativ 80.2 4.7 0.0001 41.0 6.9 43 453-496 141-185 (325)
476 cd08242 MDR_like Medium chain 79.9 5.3 0.00011 41.5 7.2 44 453-498 157-202 (319)
477 PRK07877 hypothetical protein; 79.8 1.7 3.6E-05 51.9 3.9 39 453-493 108-150 (722)
478 TIGR01751 crot-CoA-red crotony 79.8 4 8.7E-05 44.4 6.6 43 453-496 191-235 (398)
479 PRK05690 molybdopterin biosynt 79.8 2.4 5.2E-05 43.9 4.6 41 452-493 32-75 (245)
480 PRK08268 3-hydroxy-acyl-CoA de 79.7 3.4 7.4E-05 47.3 6.2 41 450-491 5-47 (507)
481 PF02670 DXP_reductoisom: 1-de 79.7 4.1 8.9E-05 38.6 5.7 40 455-494 1-46 (129)
482 PRK08507 prephenate dehydrogen 79.7 5.5 0.00012 41.4 7.3 82 454-539 2-92 (275)
483 PRK11863 N-acetyl-gamma-glutam 79.7 1.9 4.2E-05 46.4 4.0 116 454-595 4-128 (313)
484 KOG1371 UDP-glucose 4-epimeras 79.6 1.9 4.2E-05 46.7 3.9 29 453-481 3-31 (343)
485 PRK15438 erythronate-4-phospha 79.6 5.7 0.00012 44.0 7.6 80 453-539 117-208 (378)
486 cd05188 MDR Medium chain reduc 79.5 5.5 0.00012 39.4 7.0 42 452-495 135-178 (271)
487 PRK01713 ornithine carbamoyltr 79.5 13 0.00027 40.6 10.1 176 377-558 53-277 (334)
488 COG2084 MmsB 3-hydroxyisobutyr 79.4 5.4 0.00012 42.6 7.1 107 454-563 2-126 (286)
489 PRK07680 late competence prote 79.4 4.2 9.1E-05 42.2 6.3 40 454-494 2-47 (273)
490 PRK14620 NAD(P)H-dependent gly 79.4 3 6.5E-05 44.4 5.3 39 454-493 2-42 (326)
491 KOG1196 Predicted NAD-dependen 79.1 4.6 9.9E-05 43.5 6.4 130 431-564 131-276 (343)
492 PLN02256 arogenate dehydrogena 79.0 3.1 6.7E-05 44.5 5.3 108 428-539 9-128 (304)
493 KOG1198 Zinc-binding oxidoredu 78.8 4.3 9.3E-05 44.4 6.3 59 439-498 137-205 (347)
494 cd08266 Zn_ADH_like1 Alcohol d 78.8 5.8 0.00013 40.7 7.1 40 453-492 168-209 (342)
495 cd05284 arabinose_DH_like D-ar 78.7 5.1 0.00011 41.9 6.8 85 452-538 168-266 (340)
496 PRK00094 gpsA NAD(P)H-dependen 78.7 3.3 7.2E-05 43.5 5.3 39 454-493 3-43 (325)
497 PRK02472 murD UDP-N-acetylmura 78.6 3.5 7.7E-05 45.6 5.7 28 453-481 6-33 (447)
498 cd08241 QOR1 Quinone oxidoredu 78.5 7.9 0.00017 39.3 7.9 43 453-496 141-185 (323)
499 PRK07066 3-hydroxybutyryl-CoA 78.4 4.3 9.2E-05 43.9 6.1 43 450-493 5-49 (321)
500 cd08245 CAD Cinnamyl alcohol d 78.3 5.7 0.00012 41.4 6.9 98 439-538 149-256 (330)
No 1
>PLN02869 fatty aldehyde decarbonylase
Probab=100.00 E-value=3.5e-200 Score=1629.24 Aligned_cols=616 Identities=77% Similarity=1.352 Sum_probs=593.7
Q ss_pred CCCCCCCCCCCCCCCCCCceehhhHHHHHHHHhhhhhccccccccceehhHHHHHHHHHhHhHHhhhhcchhhhcCCCCC
Q 006722 1 MASKPGFLTDWPWTPLGNFKYVVLAPWIIHSTYSFIVKDEKERELAYFVIFPLMLWRMLHNQIWISFSRYRTAKGSNRIV 80 (633)
Q Consensus 1 ~~~~~~~l~~wpw~~lg~~ky~~~~p~~~~~~~~~~~~~~~~~~~~~l~i~~~~llryl~~~~wi~~~~~~~~~~k~KIq 80 (633)
||++||+||+|||++||||||+||||||+|++|+++++++++.|+.|++|++++++|++++|+|++++|++++++|+||+
T Consensus 1 ma~~pg~lt~wpW~~lG~~Ky~~~~p~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~l~~q~W~s~sr~~~~~~~~ri~ 80 (620)
T PLN02869 1 MASKPGILTDWPWKPLGSFKYVVLAPWVIHSIYSFVVKDEKERDLSYFLIFPFLLWRMLHNQLWISLSRYRTAKGNNRIV 80 (620)
T ss_pred CCCCCcccccCcccccCCeeeeeehHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhceeee
Confidence 99999999999999999999999999999999999998766777789999999999999999999999999999999999
Q ss_pred CCCcchhhhhhhhhchhhHHHHHHHHHHHHhhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhh
Q 006722 81 DKAIEFEQVDRERNWDDQIIFNGVLFYVFVKILPGASQMPIWRLDGVILTALLHAGPVEFLYYWLHRALHHHYLYSRYHS 160 (633)
Q Consensus 81 ~~~~~~~qidrE~~~~n~iil~~li~~l~~~~~p~~~~lP~w~~~g~i~~lll~~l~~Df~fYw~HRllH~~~Ly~r~Hk 160 (633)
+++++|+|+|||++||||+|+|+++++++++++|+.+.+|.|++.|+++.+++|+++.|++|||+||++|++++||++|+
T Consensus 81 ~~~i~f~QvDre~~wDd~iil~~l~~~~~~~~~p~~~~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~Hk 160 (620)
T PLN02869 81 DKGIEFEQVDRERNWDDQILFNGILFYVGYMILPGASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYHS 160 (620)
T ss_pred ccCCCceeeccccccchHHHHHHHHHHHHHHhhhhhhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHh
Confidence 99999999999999999999999999999989999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcchhccchhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhcccccceeccccccccCCCccc
Q 006722 161 HHHSSIVTEPITSVIHPFAEHIAYFALFAIPLITPLLSGMGSIASVLGYVTYIDFMNNMGHCNFELMPSCLLTNFPPLKY 240 (633)
Q Consensus 161 ~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~~lg~~~~~~~~~y~~~~~~~~~~~Hsg~e~~P~~~~~~~p~Lk~ 240 (633)
+||++.+|+|+|+..+++.|++.+.+++.+|+++..++|..|+.++++|+++.++.++++|||+|++|+++++.+|+++|
T Consensus 161 vHHss~~~~P~Ts~~HP~~E~L~y~ll~~IPLllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLky 240 (620)
T PLN02869 161 HHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLKY 240 (620)
T ss_pred hccCCCCCCchhhhcCcHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcchh
Confidence 99999999999987544458888777788999887777777899999999999999999999999999998888899999
Q ss_pred ccCCchhHHHhhcCCCCCccCCCchhhhhcCCCCCCCchHHHHhccCCCCCCCeEEeeccCCcccccccccccccccCCC
Q 006722 241 LAYTASFHSLHHTQFRTNYSLFMPVYDYIYGTVDKTSDTLYETSLKRQEDSPDVVHLTHLTTPESIYHMRLGFASMASKP 320 (633)
Q Consensus 241 li~tp~~H~lHH~~~~~NYG~~f~lWDrLFGT~~~~~~~~~~~~~~g~~~~pd~v~L~H~~~~~s~~h~~~~~~~~as~p 320 (633)
+++||++|++||+++++|||.+|++|||+|||+++++++++++..++.+++||||||||+||++|+||+||||||+||+|
T Consensus 241 ll~TPsfHdlHHs~fd~NYGlfF~~WDrLFGT~d~~s~~l~e~~~~~~~~~pd~V~l~H~t~~~s~~h~~~~~~s~as~p 320 (620)
T PLN02869 241 LMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLKRPEEIPDVVHLTHLTTPDSIYHLRLGFASLASKP 320 (620)
T ss_pred eecCchHHhHHhccCCcCcccchHHHHhccCCCCCCchhHHHHhhcCcccCCCEEEEeccCCHHHhhccchHHHHhccCC
Confidence 99999999999999999999999999999999999999999998887777999999999999999999999999999999
Q ss_pred CCCCCCCchhhhhhhHHHHHHHHHHHHhcceEEEEeeecCcceeeeEEeecccccccccchhhHHHHHHHHHHHHHHHcC
Q 006722 321 HDHHTSSKWYMWLMWPVTLWSMMFTWIYGRTFVVERNHLNKFRLQTWAIPRYNFQYLFQRQNESINRLIEEAILEAEEKG 400 (633)
Q Consensus 321 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~w~~p~~~~qy~~~~~~~~in~~i~~Ai~~A~k~G 400 (633)
|+ ++||||||||+|+++|+++|+|||||++|+|+|||+++|||+||||+|||++++++++||++||+||++|||+|
T Consensus 321 ~~----~~~~l~~~wp~~~~~m~~~w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie~ail~ad~~G 396 (620)
T PLN02869 321 YI----SKWYLRLMWPVTSWSMMLTWIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRG 396 (620)
T ss_pred cc----chhHHHHHHHHHHHHHHHHHHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHHHHHHHHHhcC
Confidence 99 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccccCCceEEeeCCCCcceeecCChhHHHHHHhcCCCCccEEEEeccCccHHHHHHHHHhhcCcEEE
Q 006722 401 AKVISLGLMNQGEELNRYGGVFVHKHPQLKMKVVDGSSLAVAVVINSIPKGTTQVVLRGALTKVAYAIAFALCQKGIQVV 480 (633)
Q Consensus 401 ~kv~~LG~ln~~e~ln~~g~~~~~k~p~L~irvv~Gnsltaavv~~~i~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~ 480 (633)
+||+|||+|||+|+|||+|++||+|||+||||||||||||||||+|+||+|++|||++|||||||||||.+|||||||++
T Consensus 397 vkv~sLg~LNk~~~LN~~G~l~v~k~p~L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~sK~~raia~~lc~r~i~~~ 476 (620)
T PLN02869 397 VKVLSLGLLNQGEELNRYGELYIHRNPKLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLSKVAYFIASALCQRGIQVA 476 (620)
T ss_pred CEEEechhcchhhhhcCCceEeeecCCCcceEEEeCCchHHHHHHHhcCCCCceEEEecCccHHHHHHHHHHHhcCCeEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999965
Q ss_pred ecChhHHHHHHHHhCCcc-cc-chhhhcccCcceEEEEcCcCCHHHHhhCCCCceeecccccCCCcccCCCCceeecCcc
Q 006722 481 TLREDEHEKLRKSFGAKS-EC-NNLLLSRSYSQKIWLVGKGLTEEEQSKAKKGTIFIPFSQFPPNDKKIRKDCMYHLTPA 558 (633)
Q Consensus 481 l~~~~~~~~l~~~l~~~~-~~-~~l~~~~~~~~~vw~vg~~~~~~~q~~a~~G~~f~~~~~~~~~~~~~R~dc~y~~~~a 558 (633)
..++|||++||+|+ |+ ++ ++|+++|+++||+|+|||+++++||+||||||+||||||+|+++ .||||+|.++||
T Consensus 477 t~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~k~w~vg~~~~~~eq~~A~~gt~f~~~~~~p~~~--~R~dC~Y~~~pa 552 (620)
T PLN02869 477 TFREDEYEKLNKKL--PNTECGSKLLLSKNYSEKIWLVGDGLTEEEQKKASKGTLFIPFSQFPPKR--LRKDCFYHTTPA 552 (620)
T ss_pred ecCHHHHHHHHHhc--cchhhhhhEEEeeccCceeEEecCCCCHHHHhhCCCCCeecccccCCchh--hhccccccCCcc
Confidence 58999999999997 77 66 89999999999999999999999999999999999999999987 999999999999
Q ss_pred cccCCccccccccccCCCcchhhhHhhhhhhhhccCCCccccCcccccHHHHHHHHHhcCCcccch
Q 006722 559 MAVPAAFENVDSCENWLPRRVMSAWRIGGIVHALEGWNEHECGYAISNIHNVWEAALRHGFHPLTA 624 (633)
Q Consensus 559 ~~~p~~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~~e~G~~i~~i~~i~~aa~kHGF~p~~~ 624 (633)
|++|+++||+++||||||||+|+||||||||||||||++||||.++++||++|+||+||||+|++.
T Consensus 553 m~~p~~~~~~~sce~~l~r~v~~a~~~~givh~legw~~he~g~~v~~id~~W~aal~hgf~p~~~ 618 (620)
T PLN02869 553 MMSPKSFENVDSCENWLPRRAMSAWRVAGILHALEGWNVHECGYTMFDIEKIWEASLQHGFRPLLI 618 (620)
T ss_pred ccCChhhcccchhhccccchhhhHhhhcceeeeecCccccccccccccHHHHHHHHHHcCCccCCC
Confidence 999999999999999999999999999999999999999999955699999999999999999874
No 2
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=100.00 E-value=1.2e-66 Score=490.13 Aligned_cols=163 Identities=64% Similarity=1.137 Sum_probs=159.8
Q ss_pred EEEeccCccHHHHHHHHHhhcCcEEEecChhHHHHHHHHhCCcccc-chhhhcccCcceEEEEcCcCCHHHHhhCCCCce
Q 006722 455 VVLRGALTKVAYAIAFALCQKGIQVVTLREDEHEKLRKSFGAKSEC-NNLLLSRSYSQKIWLVGKGLTEEEQSKAKKGTI 533 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~~v~l~~~~~~~~l~~~l~~~~~~-~~l~~~~~~~~~vw~vg~~~~~~~q~~a~~G~~ 533 (633)
|||+|+++|||||||.+||+||+||+|.++|+|++||+++ ++++ +||++++++++|+|+|||+||++||++|||||+
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~~~~~y~~lk~~~--~~~~~~~Lv~~~~~~~K~WlVGd~l~~~EQ~~Ap~Gt~ 78 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVMLSKERYESLKSEA--PEECQSNLVQSTSYQAKTWLVGDGLTEEEQKWAPKGTH 78 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEecHHHHHHHHHHc--CHHhhccEEeecCCCceeEEeCCCCCHHHHhcCCCCCE
Confidence 7999999999999999999999999999999999999997 8888 999999999999999999999999999999999
Q ss_pred eecccccCCCcccCCCCceeecCcccccCCccccccccccCCCcchhhhHhhhhhhhhccCCCccccCcccccHHHHHHH
Q 006722 534 FIPFSQFPPNDKKIRKDCMYHLTPAMAVPAAFENVDSCENWLPRRVMSAWRIGGIVHALEGWNEHECGYAISNIHNVWEA 613 (633)
Q Consensus 534 f~~~~~~~~~~~~~R~dc~y~~~~a~~~p~~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~~e~G~~i~~i~~i~~a 613 (633)
|||||||||++ +||||+|++||||++|++++|+|+||||||||+|+||||||||||||||++||||.++++||++|+|
T Consensus 79 FipfsqfP~~~--~RkDC~Y~~tPAM~~P~~~~nl~sCEnwlpRrVmsAwr~aGivHaLEgW~~HEcG~~v~~idkvW~A 156 (164)
T PF12076_consen 79 FIPFSQFPPKK--VRKDCTYHSTPAMKVPKSMENLHSCENWLPRRVMSAWRAAGIVHALEGWNHHECGDDVDRIDKVWEA 156 (164)
T ss_pred EeeccCCCcHH--HhCCCcccCcccccCChhhhhhhhhhccchhhHHHHHhhhhhhhhhcCCcccccCcccccHHHHHHH
Confidence 99999999998 9999999999999999999999999999999999999999999999999999999778999999999
Q ss_pred HHhcCCcc
Q 006722 614 ALRHGFHP 621 (633)
Q Consensus 614 a~kHGF~p 621 (633)
|++|||+|
T Consensus 157 Al~HGF~P 164 (164)
T PF12076_consen 157 ALKHGFRP 164 (164)
T ss_pred HHHcCCCC
Confidence 99999998
No 3
>PRK14982 acyl-ACP reductase; Provisional
Probab=100.00 E-value=1.1e-39 Score=345.78 Aligned_cols=297 Identities=18% Similarity=0.220 Sum_probs=226.9
Q ss_pred eEEeeccCCccccc--ccccccccccCCCCCCCCCCchhhhhhhHHHHHHHHHHHHhcceEEEEeeecCcc---eeeeEE
Q 006722 294 VVHLTHLTTPESIY--HMRLGFASMASKPHDHHTSSKWYMWLMWPVTLWSMMFTWIYGRTFVVERNHLNKF---RLQTWA 368 (633)
Q Consensus 294 ~v~L~H~~~~~s~~--h~~~~~~~~as~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~f~~~~~~~~~~---~~~~w~ 368 (633)
|.|+.|.+++++.= -..++|+. |. |-.+.. |....+|++++-.++-- ..+-|.
T Consensus 2 f~fi~H~~~~~~~~~~~~~~~~~~-----~~-------------~~~l~~----~~~~~p~~~~~~~v~S~~g~~~eg~~ 59 (340)
T PRK14982 2 FGLIGHLTSLEHAQRVARELGYDE-----YA-------------DQDLDF----WCSAPPQLVDHIEVTSATGQTIEGKY 59 (340)
T ss_pred EEEEeccCCHHHhHHHHhcCCccc-----cC-------------hHhHHH----HhhCCCeEeeeEEEEeCCCCEEEEEE
Confidence 78999999998754 23444422 22 111111 44457999999988544 446777
Q ss_pred e--ecccccccccchhhHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceEEeeC---CCCcc---eeecCChhH
Q 006722 369 I--PRYNFQYLFQRQNESINRLIEEAILEAEEKGAKVISLGLMNQGEELNRYGGVFVHKH---PQLKM---KVVDGSSLA 440 (633)
Q Consensus 369 ~--p~~~~qy~~~~~~~~in~~i~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~---p~L~i---rvv~Gnslt 440 (633)
| |.++.|+ ...+.+.+.|+|++|+..|+|.|++|++||++++ +.+++ ..+.++ .++++ +||||||||
T Consensus 60 i~~~~~pe~l-~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~ts---iv~~~-~~~~~~~~~r~i~ie~~~~TtGNs~T 134 (340)
T PRK14982 60 IESCFLPEML-SNRRFKTARRKVLNAMALAQKKGINITALGGFSS---IIFEN-FNLLQHKQVRNTTLEWERFTTGNTHT 134 (340)
T ss_pred EeCCCCHHHH-hccChHHHHHHHHHHHHHHHHCCCeEEEcCChHH---HhcCC-cccccccccccceeccccccCCchhH
Confidence 5 9999777 5445555556779999999999999999999999 66553 333221 24445 899999999
Q ss_pred HHHHHhcCCCCc---------cEEEEeccCccHHHHHHHHHhhc-Cc-EEEe--cChhHHHHHHHHhCCccccchhhhcc
Q 006722 441 VAVVINSIPKGT---------TQVVLRGALTKVAYAIAFALCQK-GI-QVVT--LREDEHEKLRKSFGAKSECNNLLLSR 507 (633)
Q Consensus 441 aavv~~~i~~~~---------~~V~~~Gatgkig~ava~~L~~~-~~-~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~ 507 (633)
|++.+++++.+. ++|+|+||||+||+.+|+.|+++ |+ ++++ |++++++.++++++.... ..+.+..
T Consensus 135 ~~ll~~~V~la~~~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i-~~l~~~l 213 (340)
T PRK14982 135 AYVICRQVEQNAPRLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI-LSLEEAL 213 (340)
T ss_pred HHHHHHHHHHhHHHhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH-HhHHHHH
Confidence 999999887522 89999999999999999999865 54 6666 889999999999732222 2333333
Q ss_pred -cCcceEEEEcC----cCCHHHHhhCCCCceeecccc---cCCCcccCCCCceeecCcccccCCccc-cc-cccccCCCc
Q 006722 508 -SYSQKIWLVGK----GLTEEEQSKAKKGTIFIPFSQ---FPPNDKKIRKDCMYHLTPAMAVPAAFE-NV-DSCENWLPR 577 (633)
Q Consensus 508 -~~~~~vw~vg~----~~~~~~q~~a~~G~~f~~~~~---~~~~~~~~R~dc~y~~~~a~~~p~~~~-~~-~~~e~~~p~ 577 (633)
..+..+++.+. .+++++ +++|.++||.+. |+|.+ -|+|+.+.+++.+++|.+++ ++ ...|+++|+
T Consensus 214 ~~aDiVv~~ts~~~~~~I~~~~---l~~~~~viDiAvPRDVd~~v--~~~~V~v~~gG~V~~p~~vd~~l~~~v~~~~~~ 288 (340)
T PRK14982 214 PEADIVVWVASMPKGVEIDPET---LKKPCLMIDGGYPKNLDTKV--QGPGIHVLKGGIVEHSLDIDWKIMEIAEMDNPQ 288 (340)
T ss_pred ccCCEEEECCcCCcCCcCCHHH---hCCCeEEEEecCCCCCCccc--CCCCEEEEeCCccccCCCcCccHHHHHhccchh
Confidence 33444455544 488877 799999999994 55554 45999999999999999977 33 447899999
Q ss_pred chhhhHhhhhhhhhccCCCcccc-Ccc-c--ccHHHHHHHHHhcCCcccc
Q 006722 578 RVMSAWRIGGIVHALEGWNEHEC-GYA-I--SNIHNVWEAALRHGFHPLT 623 (633)
Q Consensus 578 ~~~~Ac~a~~~v~alEgw~~~e~-G~~-i--~~i~~i~~aa~kHGF~p~~ 623 (633)
|+++||+||+||++||||++|++ ||| | |||++|.++|.||||+|++
T Consensus 289 r~~~Ac~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kHGf~~~~ 338 (340)
T PRK14982 289 RQMFACFAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKHGFSPLL 338 (340)
T ss_pred hHHHHHHHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHcCCcccc
Confidence 99999999999999999999955 999 8 9999999999999999975
No 4
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=100.00 E-value=2.6e-37 Score=312.15 Aligned_cols=243 Identities=19% Similarity=0.215 Sum_probs=195.1
Q ss_pred eecccccccccchhhHHHHHHHHHHHHHHHcCCcEEEecccccccccccC-CceEEeeCCCCc-ceeecCChhHHHHHHh
Q 006722 369 IPRYNFQYLFQRQNESINRLIEEAILEAEEKGAKVISLGLMNQGEELNRY-GGVFVHKHPQLK-MKVVDGSSLAVAVVIN 446 (633)
Q Consensus 369 ~p~~~~qy~~~~~~~~in~~i~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~-g~~~~~k~p~L~-irvv~Gnsltaavv~~ 446 (633)
-|..+..+.+ +.+++.|.+.+|++.|+|.|++|++||+|+| +.++ |...+.++|.+. +|+|||||+||+++|.
T Consensus 78 ~pllpe~~~s--~pkaatrrvl~a~~~a~~~Ga~V~gLGgFss---IVgn~~~n~q~~~~e~t~~~~ttgns~Tayaa~r 152 (351)
T COG5322 78 SPLLPEMLRS--RPKAATRRVLNAMALAQKLGADVTGLGGFSS---IVGNLGQNVQVRNVELTFTRFTTGNSHTAYAACR 152 (351)
T ss_pred cccCHHHHhh--CHHHHHHHHHHHHHHHHHcCCeEEeecchhh---hhccccccccccceEEEEEecccCCccchHHHHH
Confidence 3666665554 5889999999999999999999999999999 5552 356668989998 9999999999999999
Q ss_pred cCCC-------Cc--cEEEEeccCccHHHHHHHHHhhc-CcEEEe------cChhHHHHHHHHhCCccccchhhhcccCc
Q 006722 447 SIPK-------GT--TQVVLRGALTKVAYAIAFALCQK-GIQVVT------LREDEHEKLRKSFGAKSECNNLLLSRSYS 510 (633)
Q Consensus 447 ~i~~-------~~--~~V~~~Gatgkig~ava~~L~~~-~~~v~l------~~~~~~~~l~~~l~~~~~~~~l~~~~~~~ 510 (633)
++.+ +. ++|.+|||||+||++||+||+.+ ++++++ |++++++.||+++|+...+++-.+....+
T Consensus 153 ~Vl~~~~~lGidlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d~~~~~e~ 232 (351)
T COG5322 153 QVLKHFAQLGIDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLDYALPQED 232 (351)
T ss_pred HHHHHHHHhCcCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeeccccccccc
Confidence 9987 22 89999999999999999999988 777777 78889999999998888873333444445
Q ss_pred ceEEEE----cCcCCHHHHhhCCCCceeecccccCCCccc---CCCCceeecCcccccCCc--cccccccccCCCcchhh
Q 006722 511 QKIWLV----GKGLTEEEQSKAKKGTIFIPFSQFPPNDKK---IRKDCMYHLTPAMAVPAA--FENVDSCENWLPRRVMS 581 (633)
Q Consensus 511 ~~vw~v----g~~~~~~~q~~a~~G~~f~~~~~~~~~~~~---~R~dc~y~~~~a~~~p~~--~~~~~~~e~~~p~~~~~ 581 (633)
..+|++ |-.|.|+. ++||...+|=. -|..+.+ -|.|+..++++.+.-|.+ |..+...+| |.|+++
T Consensus 233 i~v~vAs~~~g~~I~pq~---lkpg~~ivD~g-~P~dvd~~vk~~~~V~Ii~GGlV~~s~~it~gi~~~~~~--p~~~l~ 306 (351)
T COG5322 233 ILVWVASMPKGVEIFPQH---LKPGCLIVDGG-YPKDVDTSVKNVGGVRIIPGGLVEHSLDITWGIMKIVGM--PVRQLF 306 (351)
T ss_pred eEEEEeecCCCceechhh---ccCCeEEEcCC-cCcccccccccCCCeEEecCccccCccccchhHHHHccc--chhhHH
Confidence 677865 34456655 77777777766 4444322 225566777777777765 665545554 999999
Q ss_pred hHhhhhhhhhccCCCcccc-Cccc--ccHHHHHHHHHhcCCccc
Q 006722 582 AWRIGGIVHALEGWNEHEC-GYAI--SNIHNVWEAALRHGFHPL 622 (633)
Q Consensus 582 Ac~a~~~v~alEgw~~~e~-G~~i--~~i~~i~~aa~kHGF~p~ 622 (633)
||.||++|+++|||++|++ ||.| |||++|.++|.||||+|+
T Consensus 307 aClAEtlil~~eg~~~~fS~Grq~~~dk~~~ig~~aekhGF~p~ 350 (351)
T COG5322 307 ACLAETLILEFEGEHTNFSWGRQILVDKMEFIGDAAEKHGFKPL 350 (351)
T ss_pred HHHHHHHHHHhcchhhhccccccccHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999966 9987 999999999999999996
No 5
>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-33 Score=288.09 Aligned_cols=205 Identities=18% Similarity=0.231 Sum_probs=168.3
Q ss_pred hHhHHhhhh--cchhhhcCCCCCCCCcc-hhhhhhhhhc--hhhHHHHHHHHHHHHhhc-----cCCCCCCCchhHHHHH
Q 006722 60 HNQIWISFS--RYRTAKGSNRIVDKAIE-FEQVDRERNW--DDQIIFNGVLFYVFVKIL-----PGASQMPIWRLDGVIL 129 (633)
Q Consensus 60 ~~~~wi~~~--~~~~~~~k~KIq~~~~~-~~qidrE~~~--~n~iil~~li~~l~~~~~-----p~~~~lP~w~~~g~i~ 129 (633)
.++.|++++ +++++.+|||||+++++ ++++..-++. .||++++.++..+.+... |....+|.|.+ ++.
T Consensus 45 ~~lpf~~iD~t~~~~~~~rYKIQp~k~~s~~~~~kc~k~vl~n~~~v~~p~~~~~y~~~~~~~~~~~~plPt~~~--~l~ 122 (283)
T KOG0873|consen 45 FCLPFIFIDVTNRPPFLRRYKIQPKKNPSLSKQLKCLKVVLLNHFLVVLPLTLVSYPFVEWFGLPSGAPLPSWKE--MLA 122 (283)
T ss_pred hcchheEeecccCcchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHhHHHHHHhCCCcCCCCCcHHH--HHH
Confidence 367777754 46889999999998764 3333322221 288888888777666543 33355777765 899
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhhhhcCCCCCCCCcchhccchhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 006722 130 TALLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFALFAIPLITPLLSGMGSIASVLGY 209 (633)
Q Consensus 130 ~lll~~l~~Df~fYw~HRllH~~~Ly~r~Hk~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~~lg~~~~~~~~~y 209 (633)
++++++++.|+.|||.||++|++++||.+||+||++++|.+.+|.|+||+|+++.++ .|++++.+++. |+.+.++|
T Consensus 123 ~l~i~~liEd~~fY~~HRL~H~~~~Yk~iHKvHHe~taPf~~sa~YaHp~E~~~lg~---~~~~~p~~~~~-H~~t~wiw 198 (283)
T KOG0873|consen 123 QLVVFFLIEDIGFYWSHRLFHHKWLYKYIHKVHHEYTAPFGLSAEYAHPLEHLFLGL---GTVMGPALLCG-HVITLWIW 198 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHhhhhcccCchhHhhhhcCHHHHHHcCC---hhhhhhHHhhh-HHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998875 24444444443 99999999
Q ss_pred HHHHHHHhhcccccceeccccccccCCCcccccCCchhHHHhhcCCCCCccCCCchhhhhcCCCCC
Q 006722 210 VTYIDFMNNMGHCNFELMPSCLLTNFPPLKYLAYTASFHSLHHTQFRTNYSLFMPVYDYIYGTVDK 275 (633)
Q Consensus 210 ~~~~~~~~~~~Hsg~e~~P~~~~~~~p~Lk~li~tp~~H~lHH~~~~~NYG~~f~lWDrLFGT~~~ 275 (633)
+++..+.++..||||++ |+++.+.+|+ ..+.++||+||..+.+||+..|++|||++||...
T Consensus 199 ~~l~i~~t~~~HsGY~f-Pwsl~~~~pf----y~ga~~HD~HH~~f~~n~~~~f~~~D~i~GTd~~ 259 (283)
T KOG0873|consen 199 IALRILETVESHSGYDF-PWSLSKLIPF----YGGAEHHDYHHLVFIGNFASVFGYLDRIHGTDST 259 (283)
T ss_pred HHHHHHHHhhccCCCCC-CccccccCcc----cCCCcccchhhhhccccccchhHHHHHHhccCcc
Confidence 99999999999999998 9998888786 3689999999999999999999999999999654
No 6
>COG3000 ERG3 Sterol desaturase [Lipid metabolism]
Probab=99.95 E-value=3.3e-27 Score=244.35 Aligned_cols=159 Identities=28% Similarity=0.383 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhcCCCCCCCCcchhccchhhhHHHHHHHHHHHHHHHHhhhhhHHHH
Q 006722 126 GVILTALLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFALFAIPLITPLLSGMGSIAS 205 (633)
Q Consensus 126 g~i~~lll~~l~~Df~fYw~HRllH~~~Ly~r~Hk~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~~lg~~~~~~ 205 (633)
.+++++++.+++.|+++||.||+.|..++||++|++||++.+|+++|+.+.||+|.++......+|++++ | .+..+
T Consensus 94 ~~~l~~~~~~~~~D~~~Y~~HR~~H~~~~~w~~H~~HH~~~~~~~~t~~~~hp~e~ll~~~~~~~~~~l~---~-~~~~~ 169 (271)
T COG3000 94 PFALQLLLAFLFLDLGYYWAHRLLHRVPLLWAFHKVHHSSEVPDPLTALRFHPLEILLLAFLGLLPLLLL---G-LSPVA 169 (271)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCcccCCchhhhhcChHHHHHHHHHHHHHHHHh---c-CCHHH
Confidence 3577888888999999999999999999999999999999999999999999999999877666666553 3 45666
Q ss_pred HHHHHHHHHHHhhcccccceeccccccccCCCcccccCCchhHHHhhcCC--CCCccCCCchhhhhcCCCCCCCchHHHH
Q 006722 206 VLGYVTYIDFMNNMGHCNFELMPSCLLTNFPPLKYLAYTASFHSLHHTQF--RTNYSLFMPVYDYIYGTVDKTSDTLYET 283 (633)
Q Consensus 206 ~~~y~~~~~~~~~~~Hsg~e~~P~~~~~~~p~Lk~li~tp~~H~lHH~~~--~~NYG~~f~lWDrLFGT~~~~~~~~~~~ 283 (633)
+..+.++..+.+.++|||++. | . ..+++++++.+|++|++||+++ ++|||.++++|||+|||+.++.++.+++
T Consensus 170 ~~~~~~~~~~~~~~~H~~~~~-~-~---~~~~~~~v~~~p~~H~lHH~~~~~~~Nyg~~~~~WDrlFGT~~~~~~~~~~~ 244 (271)
T COG3000 170 VALLFIFLLFWAVLIHSNLDL-P-L---PLGWLRYVFNTPRHHRLHHSKDPYDKNYGVTLTFWDRLFGTYHPPDEREPDK 244 (271)
T ss_pred HHHHHHHHHHHHHHHhcCccc-c-C---CcccceeeecCchHHHHhccCCCCCCcchhhhHHHHHHcccCCCCcccCccc
Confidence 677778888999999999996 4 2 1345666789999999999998 4999999999999999999999888888
Q ss_pred hccCCCCCCC
Q 006722 284 SLKRQEDSPD 293 (633)
Q Consensus 284 ~~~g~~~~pd 293 (633)
++.+.++.+|
T Consensus 245 ~~~~~~~~~~ 254 (271)
T COG3000 245 IGVKAKIALD 254 (271)
T ss_pred cccccccccc
Confidence 7655555555
No 7
>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]
Probab=99.88 E-value=1.4e-22 Score=204.89 Aligned_cols=142 Identities=22% Similarity=0.326 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhcCCCCCCCCcchhccchhhhHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 006722 127 VILTALLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFALFAIPLITPLLSGMGSIASV 206 (633)
Q Consensus 127 ~i~~lll~~l~~Df~fYw~HRllH~~~Ly~r~Hk~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~~lg~~~~~~~ 206 (633)
.+..++++++..||.+||.||.+|++.+||+.|+.||++...+|+++.++||++.+++++ |-.+.++.-+.|..+.
T Consensus 128 ~~~~i~~flfF~Df~iYw~HR~lH~~~vy~~LH~~HH~~~~~tpfAslafhpidg~lqai----p~~I~~Fi~Plh~~t~ 203 (312)
T KOG0872|consen 128 LFVSIFLFLFFTDFGIYWAHRELHHRGVYKRLHKPHHIWNICTPFASLAFHPIDGFLQAI----PYHIYPFIFPLHKVTY 203 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhcchhhhhhccCchhhhhcCcchhHhhhc----hhHheeeeecchHHHH
Confidence 677777888899999999999999999999999999999999999999999999998774 4443333333456666
Q ss_pred HHHHHHHHHHhhcccccceeccccccccCCCcccccCCchhHHHhhcCCCCCccCCCchhhhhcCCCCCCCchHHH
Q 006722 207 LGYVTYIDFMNNMGHCNFELMPSCLLTNFPPLKYLAYTASFHSLHHTQFRTNYSLFMPVYDYIYGTVDKTSDTLYE 282 (633)
Q Consensus 207 ~~y~~~~~~~~~~~Hsg~e~~P~~~~~~~p~Lk~li~tp~~H~lHH~~~~~NYG~~f~lWDrLFGT~~~~~~~~~~ 282 (633)
+....+..+++++.|.|.-. -+.+.+++|.+|..||..++.|||.++.+|||+|||++.+.++.++
T Consensus 204 L~l~~f~~iwt~~IHd~~~~----------~l~~~ingaahHtvHH~~f~~NYG~~tilwDrmfgSfr~p~~~~~d 269 (312)
T KOG0872|consen 204 LSLFTFVNIWTISIHDGIYG----------SLNPPINGAAHHTVHHTYFDYNYGQYTILWDRMFGSFRAPDHEDFD 269 (312)
T ss_pred HHHHHHHHhHheeeeccccc----------cccCccccccccceeeeeEecCCCcEEEeHHhccCcccCccccccc
Confidence 66666678889999998643 1334578999999999999999999999999999999988876555
No 8
>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]
Probab=99.80 E-value=8.1e-21 Score=186.99 Aligned_cols=147 Identities=24% Similarity=0.389 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhhcCCCCCCCCcchhccchhhhHHHHHHH-HHHHHHHHHhhhhhHHH
Q 006722 127 VILTALLHAGPVEFLYYWLHRALH-HHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFAL-FAIPLITPLLSGMGSIA 204 (633)
Q Consensus 127 ~i~~lll~~l~~Df~fYw~HRllH-~~~Ly~r~Hk~HHss~~p~p~ta~~~hplE~ll~~~l-~~iPll~~~~lg~~~~~ 204 (633)
...+++..+++.|.|+|++||.|| .+.||+.+|++||+-.+|.+..|.|.||+|.++...+ -++..+ +.|.++--
T Consensus 122 ~A~q~f~aflviDtWQYF~HRymH~NK~LYk~iHs~HHrL~VPYayGALyNhP~EGllLDT~G~gla~l---~sglspr~ 198 (287)
T KOG0874|consen 122 LARQFFAAFLVIDTWQYFLHRYMHMNKFLYKHIHSQHHRLIVPYAYGALYNHPVEGLLLDTIGGGLAFL---LSGLSPRT 198 (287)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhceeEecchhhhhhhcCcchhhhhhhhchHHHHH---HcCCCccc
Confidence 456777888899999999999999 6889999999999999999999999999999987654 112222 23433322
Q ss_pred HHHHHHHHHHHHhhcccccceeccccccccCCCcccccCCchhHHHhhcC--CCCCcc-CCCchhhhhcCCCCCCCchHH
Q 006722 205 SVLGYVTYIDFMNNMGHCNFELMPSCLLTNFPPLKYLAYTASFHSLHHTQ--FRTNYS-LFMPVYDYIYGTVDKTSDTLY 281 (633)
Q Consensus 205 ~~~~y~~~~~~~~~~~Hsg~e~~P~~~~~~~p~Lk~li~tp~~H~lHH~~--~~~NYG-~~f~lWDrLFGT~~~~~~~~~ 281 (633)
. .++..+.++-++.+||||-+ |..+++.+ +-+.+.+||+||+. ...||+ .||++||+++||+.+.+.|..
T Consensus 199 a-iifFtfaTiKTVDDHCGy~l-P~dpfqm~-----F~NNa~YHDiHHQ~yG~k~NFsQPFFtfWD~ilgTYmp~~~E~~ 271 (287)
T KOG0874|consen 199 A-IIFFTFATIKTVDDHCGYWL-PGDPFQMF-----FPNNAAYHDIHHQLYGTKYNFSQPFFTFWDRILGTYMPYSLEKR 271 (287)
T ss_pred e-EEEEEeeeeeeecccccccc-CCCceeEe-----ccCCchhhhhhhhhhccccccCCcHHHHHHHHHhhcCCchhccc
Confidence 2 23334556778899999976 88766532 23689999999998 578997 789999999999988775544
Q ss_pred HH
Q 006722 282 ET 283 (633)
Q Consensus 282 ~~ 283 (633)
.+
T Consensus 272 ~e 273 (287)
T KOG0874|consen 272 LE 273 (287)
T ss_pred cc
Confidence 43
No 9
>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.69 E-value=4.4e-17 Score=145.22 Aligned_cols=111 Identities=30% Similarity=0.406 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHHhhc-hhhhhhhhhhcCCCCCCCCcchhccchhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 006722 133 LHAGPVEFLYYWLHRALH-HHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFALFAIPLITPLLSGMGSIASVLGYVT 211 (633)
Q Consensus 133 l~~l~~Df~fYw~HRllH-~~~Ly~r~Hk~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~~lg~~~~~~~~~y~~ 211 (633)
+.+++.|+.+||+||++| .+++| ++|+.||++++|+++++.+.+|+|.++...+ +++++.+++..+..++.++.+
T Consensus 3 ~~~l~~d~~~Y~~HRl~H~~~~l~-~~H~~HH~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 78 (114)
T PF04116_consen 3 LGFLLWDFWEYWMHRLLHKIPFLW-RIHKVHHSPKNPTPLSAFRFHPLEALLLALL---PLLLPLLLLPFHALAFLLGIA 78 (114)
T ss_pred eeHHHHHHHHHHHHHHHhcCchHH-HHHHHHhCCcccCchHHHHcChHHHHHHHHH---HHHHHHHHHhHhHHHHHHHHH
Confidence 446778999999999999 56666 9999999999999999999999999987654 332222234456777777888
Q ss_pred HHHHHhhcccccceeccccccccCCCcccccCCchhHHHhhc
Q 006722 212 YIDFMNNMGHCNFELMPSCLLTNFPPLKYLAYTASFHSLHHT 253 (633)
Q Consensus 212 ~~~~~~~~~Hsg~e~~P~~~~~~~p~Lk~li~tp~~H~lHH~ 253 (633)
+..+.+.++|||+.. + ..+.++++..+|++|+.||+
T Consensus 79 ~~~~~~~~~H~~~~~-~-----~~~~~~~~~~~~~~H~~HH~ 114 (114)
T PF04116_consen 79 LFYLWYIFIHSGYHH-R-----FPPRLRYLFVTPRHHDLHHS 114 (114)
T ss_pred HHHHHHHHhhcCccC-C-----CCCcchhHhcCHHHHHhhCc
Confidence 888999999999921 1 12456777889999999996
No 10
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.34 E-value=5.7e-12 Score=123.68 Aligned_cols=166 Identities=14% Similarity=0.085 Sum_probs=113.9
Q ss_pred ecCChhHHHHHHhcCCCCc---------cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCc--ccc
Q 006722 434 VDGSSLAVAVVINSIPKGT---------TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAK--SEC 500 (633)
Q Consensus 434 v~Gnsltaavv~~~i~~~~---------~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~--~~~ 500 (633)
|+||++|||++++.+.+.. ++|+++|+||.+|+++++.|+++|.+|.+ |+.++.+++.++++.. .+.
T Consensus 1 ~~G~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~ 80 (194)
T cd01078 1 SNGSNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGV 80 (194)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcE
Confidence 6899999999999887632 69999999999999999999999999988 9999999988876210 000
Q ss_pred --------chhhhcccCcceEEE----EcCcCCHHHHhhCCCCceeecccccCCCc---ccCCCCceeecCcccccCCcc
Q 006722 501 --------NNLLLSRSYSQKIWL----VGKGLTEEEQSKAKKGTIFIPFSQFPPND---KKIRKDCMYHLTPAMAVPAAF 565 (633)
Q Consensus 501 --------~~l~~~~~~~~~vw~----vg~~~~~~~q~~a~~G~~f~~~~~~~~~~---~~~R~dc~y~~~~a~~~p~~~ 565 (633)
..+.+.. .++++++ .|.......+....+|.+++|+...|+.. .+.|+|.++.+++...-+
T Consensus 81 ~~~~~~~~~~~~~~~-~~~diVi~at~~g~~~~~~~~~~~~~~~vv~D~~~~~~~~~~~~~~~~~~~~~~g~~~~g~--- 156 (194)
T cd01078 81 GAVETSDDAARAAAI-KGADVVFAAGAAGVELLEKLAWAPKPLAVAADVNAVPPVGIEGIDVPDKGVDREGKVPYGA--- 156 (194)
T ss_pred EEeeCCCHHHHHHHH-hcCCEEEECCCCCceechhhhcccCceeEEEEccCCCCCCcccccccCCceecCCCeEEEe---
Confidence 0111111 1445542 22211122222334589999999544322 346789999997732212
Q ss_pred ccccccccCCCcchhhhHhhhhhhhhccCCCccccCcccccHHHHHHHHHhc
Q 006722 566 ENVDSCENWLPRRVMSAWRIGGIVHALEGWNEHECGYAISNIHNVWEAALRH 617 (633)
Q Consensus 566 ~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~~e~G~~i~~i~~i~~aa~kH 617 (633)
...+++|+++.+||++|.|. +|+... +.++|-+.|+||
T Consensus 157 ----~~~~g~~~~~~~~~~ae~~~--~~~~~~--------~~~~~~~~~~~~ 194 (194)
T cd01078 157 ----IGVGGLKMKTHRACIAKLFE--SNPLVL--------DAEEIYDLAKEM 194 (194)
T ss_pred ----eccchhHHHHHHHHHHHHhh--cCCeee--------chHHHHHHHhcC
Confidence 24488999999999999998 366443 356777777776
No 11
>PLN02434 fatty acid hydroxylase
Probab=98.87 E-value=4.8e-08 Score=99.89 Aligned_cols=134 Identities=22% Similarity=0.285 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-hchh-------hhhhhhhhcCCCCCCCCcchhccchhhhHHHHHHHHHHHHHHHHhh
Q 006722 127 VILTALLHAGPVEFLYYWLHRA-LHHH-------YLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFALFAIPLITPLLS 198 (633)
Q Consensus 127 ~i~~lll~~l~~Df~fYw~HRl-lH~~-------~Ly~r~Hk~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~~l 198 (633)
.+..+++.+++.-+..|.+||. +|.+ .+....|..||..+ .-.....++|.-.++....+...+.. ++
T Consensus 83 ~~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~P--~D~~rLv~PP~~~~~l~~~~~~l~~~--~~ 158 (237)
T PLN02434 83 VVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKHP--MDGLRLVFPPAATAILCVPFWNLIAL--FA 158 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcCC--CCCCCeecCcHHHHHHHHHHHHHHHH--Hc
Confidence 4555667778899999999997 5841 23346788999764 32233446665544433221111111 11
Q ss_pred hh-----hHHHHHHHHHHHHHHHhhcccccceeccccccccCCCcccccCCchhHHHhhcC-CCCCccCCCchhhhhcCC
Q 006722 199 GM-----GSIASVLGYVTYIDFMNNMGHCNFELMPSCLLTNFPPLKYLAYTASFHSLHHTQ-FRTNYSLFMPVYDYIYGT 272 (633)
Q Consensus 199 g~-----~~~~~~~~y~~~~~~~~~~~Hsg~e~~P~~~~~~~p~Lk~li~tp~~H~lHH~~-~~~NYG~~f~lWDrLFGT 272 (633)
+. .-...+.+|+.| +......|.+ + |.. ++++. --++|..||-+ .+.|||...++||++|||
T Consensus 159 ~~~~a~~~~~G~l~gYl~Y-d~~Hy~lH~~-~--p~~-----~~~r~---lkr~H~~HHfk~~~~~fGVTs~~wD~vFGT 226 (237)
T PLN02434 159 TPATAPALFGGGLLGYVMY-DCTHYFLHHG-Q--PST-----DVLRN---LKKYHLNHHFRDQDKGFGITSSLWDRVFGT 226 (237)
T ss_pred chhHHHHHHHHHHHHHHHH-HHHHHHHHhc-C--cch-----HHHHH---HHHHHHHHcCCCCCCCCCcCchHHHHhcCC
Confidence 10 011234455554 4555666653 2 421 23333 36899999987 589999999999999999
Q ss_pred CCCC
Q 006722 273 VDKT 276 (633)
Q Consensus 273 ~~~~ 276 (633)
..++
T Consensus 227 ~~~~ 230 (237)
T PLN02434 227 LPPS 230 (237)
T ss_pred CCCc
Confidence 8544
No 12
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.76 E-value=3.5e-05 Score=80.46 Aligned_cols=43 Identities=26% Similarity=0.427 Sum_probs=41.3
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
-+.++++||||+||+++|+.|++||.+|++ |++||+++|+++|
T Consensus 6 ~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l 50 (265)
T COG0300 6 GKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKEL 50 (265)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHH
Confidence 368999999999999999999999999999 9999999999998
No 13
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.74 E-value=3.9e-05 Score=78.85 Aligned_cols=43 Identities=33% Similarity=0.431 Sum_probs=41.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
+-|+++||+|+||.|+|+.|++.|.+|++ |++||+++|+.+++
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~ 51 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIG 51 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhc
Confidence 56899999999999999999999999999 99999999999994
No 14
>PLN02601 beta-carotene hydroxylase
Probab=97.57 E-value=0.00051 Score=71.11 Aligned_cols=132 Identities=25% Similarity=0.414 Sum_probs=71.6
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-hchhhhhhhhhhcCCCCCCCCcchhccchhhhHHHHHHHHHHHHHHH
Q 006722 117 SQMPIWRLDGVILTALLHAGPVEFLYYWLHRA-LHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFALFAIPLITP 195 (633)
Q Consensus 117 ~~lP~w~~~g~i~~lll~~l~~Df~fYw~HRl-lH~~~Ly~r~Hk~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~ 195 (633)
.+.|.-.-.+.+..++.-++..|++-+|.||. ||- +.|..|+-||+... .++- .++ + +++++++|-+.+
T Consensus 126 g~~p~~em~~~~al~lgtfvgMEf~Aw~aHKYvMHG--~LW~lH~sHH~Pr~-g~FE--~ND-l----FaVifAvpAIaL 195 (303)
T PLN02601 126 GEVSMLEMFGTFALSVGAAVGMEFWARWAHRALWHD--SLWNMHESHHKPRE-GAFE--LND-V----FAIVNAVPAIGL 195 (303)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cchhhhhhcCCCCC-CCcc--ccc-c----hhhhhHHHHHHH
Confidence 46664332223333344556679999999996 575 35788999998764 2221 111 1 112233344333
Q ss_pred HhhhhhH--H---------HHHHHH-HHHHHHHhhcccccceeccccccccCCCcccccCCchhHHHhhcC--CCCCccC
Q 006722 196 LLSGMGS--I---------ASVLGY-VTYIDFMNNMGHCNFELMPSCLLTNFPPLKYLAYTASFHSLHHTQ--FRTNYSL 261 (633)
Q Consensus 196 ~~lg~~~--~---------~~~~~y-~~~~~~~~~~~Hsg~e~~P~~~~~~~p~Lk~li~tp~~H~lHH~~--~~~NYG~ 261 (633)
+..|..+ . ..+.+| +.|+.+...+.|--+ |.....+.|+++.+ ...|.+||+. ...+||.
T Consensus 196 ~~~G~~~~g~~p~~~fgiGlGITlYGiaYffVHDgLVHqRf---p~~~~a~~~Y~rrl---~~AHklHHa~Ke~Gv~FGf 269 (303)
T PLN02601 196 LYYGFFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRF---PVGPIANVPYLRKV---AAAHQLHHTDKFKGVPYGL 269 (303)
T ss_pred HHHhhccccccHHHHHHHHHhHHHHHHHHHHHhhhhhcccc---ccCCCCCCHHHHHH---HHHHHhhccCCcCCccceE
Confidence 3333210 0 111223 245566666777543 33222233556554 6899999983 4679998
Q ss_pred CCc
Q 006722 262 FMP 264 (633)
Q Consensus 262 ~f~ 264 (633)
++.
T Consensus 270 ll~ 272 (303)
T PLN02601 270 FLG 272 (303)
T ss_pred Eec
Confidence 755
No 15
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.54 E-value=9.7e-05 Score=78.18 Aligned_cols=42 Identities=26% Similarity=0.362 Sum_probs=39.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
.=.+|+|||+|||++.|+-||+||.+|.| |+++||+.+++||
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI 93 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEI 93 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 45688999999999999999999999999 9999999999998
No 16
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.45 E-value=0.00024 Score=66.55 Aligned_cols=88 Identities=26% Similarity=0.280 Sum_probs=58.9
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcE-EEe--cChhHHHHHHHHhCCcccc-chhhhccc--CcceEEE----Ec-CcC
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQ-VVT--LREDEHEKLRKSFGAKSEC-NNLLLSRS--YSQKIWL----VG-KGL 520 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~l~~~~~~-~~l~~~~~--~~~~vw~----vg-~~~ 520 (633)
-++|+++|| |++|+++|.+|+++|.+ +++ |+.+|.++|.++++..... ..+.+..+ ..+++++ +| ..+
T Consensus 12 ~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~~~~i 90 (135)
T PF01488_consen 12 GKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSGMPII 90 (135)
T ss_dssp TSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTTSTSS
T ss_pred CCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCCCccc
Confidence 479999998 88999999999999888 777 9999999999998322211 22222221 1445542 22 245
Q ss_pred CHHHHhhCCCC----ceeecccccCCCc
Q 006722 521 TEEEQSKAKKG----TIFIPFSQFPPND 544 (633)
Q Consensus 521 ~~~~q~~a~~G----~~f~~~~~~~~~~ 544 (633)
+++. ++++ .+++|.+ +|+..
T Consensus 91 ~~~~---~~~~~~~~~~v~Dla-~Pr~i 114 (135)
T PF01488_consen 91 TEEM---LKKASKKLRLVIDLA-VPRDI 114 (135)
T ss_dssp THHH---HTTTCHHCSEEEES--SS-SB
T ss_pred CHHH---HHHHHhhhhceeccc-cCCCC
Confidence 5555 4444 4999998 77774
No 17
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.44 E-value=0.00052 Score=71.29 Aligned_cols=138 Identities=17% Similarity=0.134 Sum_probs=84.1
Q ss_pred ecCChhHHHHHHhcCCCCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcc-cc-chhhhcccC
Q 006722 434 VDGSSLAVAVVINSIPKGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKS-EC-NNLLLSRSY 509 (633)
Q Consensus 434 v~Gnsltaavv~~~i~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~-~~-~~l~~~~~~ 509 (633)
|||-....+.--.......+.|+++|+ |++|+++|..|++.|.+|++ |+.++.+++.++++... .. ..+.+....
T Consensus 99 TD~~G~~~~l~~~~~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~ 177 (270)
T TIGR00507 99 TDGIGLVSDLERLIPLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDELPLH 177 (270)
T ss_pred CCHHHHHHHHHhcCCCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhhhccc
Confidence 777777766321122233478999998 89999999999999999888 88899999988863211 11 111111111
Q ss_pred cceEEEE--cCc----CC--HHHHhhCCCCceeecccccCCCc---ccCC-CCceeecCcccccCCccccccccccCC
Q 006722 510 SQKIWLV--GKG----LT--EEEQSKAKKGTIFIPFSQFPPND---KKIR-KDCMYHLTPAMAVPAAFENVDSCENWL 575 (633)
Q Consensus 510 ~~~vw~v--g~~----~~--~~~q~~a~~G~~f~~~~~~~~~~---~~~R-~dc~y~~~~a~~~p~~~~~~~~~e~~~ 575 (633)
++++++- +.+ ++ +-+-..+++|.+++|.+=.|+.. .+.| +.|.+.++..|-+=. ...++|.|.
T Consensus 178 ~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T~ll~~A~~~G~~~vdG~~Ml~~Q---a~~~f~~w~ 252 (270)
T TIGR00507 178 RVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGETPFLAEAKSLGTKTIDGLGMLVAQ---AALAFELWT 252 (270)
T ss_pred CccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeeeCCHHHHHHH---HHHHHHHHc
Confidence 4455422 111 11 10112478899999998666543 1123 678888888886633 333555554
No 18
>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]
Probab=97.16 E-value=0.0013 Score=65.96 Aligned_cols=135 Identities=24% Similarity=0.286 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHHHHHhh-chh---hhhh------hhhhcCCCCCCCCcchhccchhhhHHHHHHHHHHHHHHHH--h
Q 006722 130 TALLHAGPVEFLYYWLHRAL-HHH---YLYS------RYHSHHHSSIVTEPITSVIHPFAEHIAYFALFAIPLITPL--L 197 (633)
Q Consensus 130 ~lll~~l~~Df~fYw~HRll-H~~---~Ly~------r~Hk~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~--~ 197 (633)
.+++.++...+..|-.||++ |.+ .=|| -+|..||.... --.-..++|.-..+....+..++-..+ .
T Consensus 86 ~f~~Gvf~WTl~EY~lHRflFH~k~~~~s~~~~t~Hfl~HGcHHk~P~--D~~RLVfPP~~~~il~~pfy~~~~~vl~~~ 163 (240)
T KOG0539|consen 86 LFVIGVFTWTLIEYTLHRFLFHIKPNPDSYWLITLHFLIHGCHHKLPM--DGYRLVFPPTPFAILAAPFYLILSLVLPHP 163 (240)
T ss_pred HHHHHHHHHHHHHHHHHheEEEecCCCCchHHHHHHHHHhcccccCCC--CCceEecCCchHHHHHHHHHHHHHHhcCcc
Confidence 34555667899999999975 754 1122 36889998642 222345666665554433222221110 0
Q ss_pred hhhh-HHHHHHHHHHHHHHHhhcccccceeccccccccCCCcccccCCchhHHHhhcC-CCCCccCCCchhhhhcCCCCC
Q 006722 198 SGMG-SIASVLGYVTYIDFMNNMGHCNFELMPSCLLTNFPPLKYLAYTASFHSLHHTQ-FRTNYSLFMPVYDYIYGTVDK 275 (633)
Q Consensus 198 lg~~-~~~~~~~y~~~~~~~~~~~Hsg~e~~P~~~~~~~p~Lk~li~tp~~H~lHH~~-~~~NYG~~f~lWDrLFGT~~~ 275 (633)
.+.+ -...+++|+.|-...=.+.|.+- |+ .|.++. --.+|.-||-+ .+.-||....+||++|||.-.
T Consensus 164 ~~~a~faG~l~GYV~YDmtHYyLHhg~p---~~-----~~~~~~---lK~yHl~HHfk~q~~GfGItS~lWD~VFgTl~~ 232 (240)
T KOG0539|consen 164 VAPAGFAGGLLGYVCYDMTHYYLHHGSP---PK-----RPYLKH---LKKYHLNHHFKHQDLGFGITSSLWDYVFGTLGP 232 (240)
T ss_pred hhhhhhccchhhhhhhhhhhhhhhcCCC---CC-----chHHHH---HHHHHhhhhhhccccCccccHHHHHHHhccCCC
Confidence 0100 01245577665433333444431 12 133332 36788889887 789999999999999999765
Q ss_pred CC
Q 006722 276 TS 277 (633)
Q Consensus 276 ~~ 277 (633)
..
T Consensus 233 ~~ 234 (240)
T KOG0539|consen 233 LK 234 (240)
T ss_pred Cc
Confidence 54
No 19
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.10 E-value=0.0014 Score=68.49 Aligned_cols=127 Identities=20% Similarity=0.162 Sum_probs=75.7
Q ss_pred eecCChhHHHHHH-hcCCCCccEEEEeccCccHHHHHHHHHhhcC-cEEEe--cChhHHHHHHHHhCCccccch---hhh
Q 006722 433 VVDGSSLAVAVVI-NSIPKGTTQVVLRGALTKVAYAIAFALCQKG-IQVVT--LREDEHEKLRKSFGAKSECNN---LLL 505 (633)
Q Consensus 433 vv~Gnsltaavv~-~~i~~~~~~V~~~Gatgkig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~l~~~~~~~~---l~~ 505 (633)
=|||-...++.-- ......-++|+|+|+ |++|++++.+|+++| .+|++ |+.++.++++++++....... +.+
T Consensus 103 NTD~~G~~~~l~~~~~~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~ 181 (278)
T PRK00258 103 NTDGIGFVRALEERLGVDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDLELQE 181 (278)
T ss_pred cccHHHHHHHHHhccCCCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecccchh
Confidence 3666666665542 122233478999998 999999999999999 68888 999999999998732110000 111
Q ss_pred cccCcceEEE----EcC----cCCHHHHhhCCCCceeecccccCCCc---ccCC-CCceeecCccccc
Q 006722 506 SRSYSQKIWL----VGK----GLTEEEQSKAKKGTIFIPFSQFPPND---KKIR-KDCMYHLTPAMAV 561 (633)
Q Consensus 506 ~~~~~~~vw~----vg~----~~~~~~q~~a~~G~~f~~~~~~~~~~---~~~R-~dc~y~~~~a~~~ 561 (633)
.. ..+|+++ +|- ..+|-+-..+++++.++|++--|... .+.| +-|.+..+..|-+
T Consensus 182 ~~-~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~Ml~ 248 (278)
T PRK00258 182 EL-ADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPTPFLAWAKAQGARTIDGLGMLV 248 (278)
T ss_pred cc-ccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHHHCcCeecCCHHHHH
Confidence 11 1344542 221 11222233578888888887433321 1112 5677777776655
No 20
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.06 E-value=0.0032 Score=66.48 Aligned_cols=128 Identities=20% Similarity=0.205 Sum_probs=77.7
Q ss_pred HHHHcCCcEEEecccccccccccCCceEEeeCCCCcceeecCChhHHHHHHhcCCCCc--cEEEEeccCccHHHHHHHHH
Q 006722 395 EAEEKGAKVISLGLMNQGEELNRYGGVFVHKHPQLKMKVVDGSSLAVAVVINSIPKGT--TQVVLRGALTKVAYAIAFAL 472 (633)
Q Consensus 395 ~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~L~irvv~Gnsltaavv~~~i~~~~--~~V~~~Gatgkig~ava~~L 472 (633)
.|+++|++|+.+-..+ ++.......++ ..+.+.+++..+.+. ++|.++|+ |.+|+++|+.|
T Consensus 108 ~a~~~gi~v~~~~~~~---~va~~n~~~~A-------------e~ai~~al~~~~~~l~gk~v~IiG~-G~iG~avA~~L 170 (287)
T TIGR02853 108 LAADAGVKLIELFERD---DVAIYNSIPTA-------------EGAIMMAIEHTDFTIHGSNVMVLGF-GRTGMTIARTF 170 (287)
T ss_pred HHHHCCCeEEEEEecc---ceEEEccHhHH-------------HHHHHHHHHhcCCCCCCCEEEEEcC-hHHHHHHHHHH
Confidence 6778888888766522 22111111111 123334454443333 79999999 78999999999
Q ss_pred hhcCcEEEe--cChhHHHHHHHHhCCcccc-chhhhcccCcceEEEEc---CcCCHHHHhhCCCCceeecccccC
Q 006722 473 CQKGIQVVT--LREDEHEKLRKSFGAKSEC-NNLLLSRSYSQKIWLVG---KGLTEEEQSKAKKGTIFIPFSQFP 541 (633)
Q Consensus 473 ~~~~~~v~l--~~~~~~~~l~~~l~~~~~~-~~l~~~~~~~~~vw~vg---~~~~~~~q~~a~~G~~f~~~~~~~ 541 (633)
...|.+|++ |++++.+++++ .|..... ..+.+..+ ++|+++.- ..++.+.-.++++|++++|.+--|
T Consensus 171 ~~~G~~V~v~~R~~~~~~~~~~-~g~~~~~~~~l~~~l~-~aDiVint~P~~ii~~~~l~~~k~~aliIDlas~P 243 (287)
T TIGR02853 171 SALGARVFVGARSSADLARITE-MGLIPFPLNKLEEKVA-EIDIVINTIPALVLTADVLSKLPKHAVIIDLASKP 243 (287)
T ss_pred HHCCCEEEEEeCCHHHHHHHHH-CCCeeecHHHHHHHhc-cCCEEEECCChHHhCHHHHhcCCCCeEEEEeCcCC
Confidence 999999998 88777766543 3332222 23333332 44554322 124666667789999999999433
No 21
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.88 E-value=0.0013 Score=69.94 Aligned_cols=42 Identities=21% Similarity=0.404 Sum_probs=39.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||||+||+++|+.|+++|.+|.+ |++++++++++++
T Consensus 54 ~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l 97 (320)
T PLN02780 54 SWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSI 97 (320)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
Confidence 57899999999999999999999999998 9999999988876
No 22
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.86 E-value=0.0034 Score=69.52 Aligned_cols=135 Identities=16% Similarity=0.163 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHhhchhhhhhhhhhcCCCCCCCCcc---------hhccchhhhHHHHHHHHHHHHHHHH-hh-hh----
Q 006722 136 GPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPI---------TSVIHPFAEHIAYFALFAIPLITPL-LS-GM---- 200 (633)
Q Consensus 136 l~~Df~fYw~HRllH~~~Ly~r~Hk~HHss~~p~p~---------ta~~~hplE~ll~~~l~~iPll~~~-~l-g~---- 200 (633)
++.|..+=.+|-+.|....+.|.|..||..-.++-- +..|+.|+|+++..++-.+|.++.. .. +.
T Consensus 17 ~~~~~~~d~~h~~~h~~~~l~~~h~~hh~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (406)
T PRK07424 17 LWVEIVRDSYHALAHQWNPLYRLHNWHHRVFRPDLSVVSEEIYRKAHWYNDVPEALVMLLFGTLPVLLLQQWNVPYGWLA 96 (406)
T ss_pred HHHHHHHHHHHHHHhhchHHHHHHHhHHhhcCCcCCcccHHHHhhhhhhcCCHHHHHHHHHhhHHHHHHhhhcccccchh
Confidence 345666666677777555566899999998776532 3568899997765443222222221 10 00
Q ss_pred -hHHHHHHHHH---HHHHHHhhccc-cccee--ccccccccCCCcccccCCchhHHHhhcCCC-CCccCCCchhhhhcCC
Q 006722 201 -GSIASVLGYV---TYIDFMNNMGH-CNFEL--MPSCLLTNFPPLKYLAYTASFHSLHHTQFR-TNYSLFMPVYDYIYGT 272 (633)
Q Consensus 201 -~~~~~~~~y~---~~~~~~~~~~H-sg~e~--~P~~~~~~~p~Lk~li~tp~~H~lHH~~~~-~NYG~~f~lWDrLFGT 272 (633)
.+......+. +.... .+... ++-|. .|.. +.. ++-.| +..+.||-.||-..+ .-||..+++.|+..||
T Consensus 97 ~~~~~~~~~~~~~~~~r~~-~~~~~~~~~d~~h~~~~-~~~-~~~~~-~v~~~~h~rh~~~~~~~~~~~~~~~~d~~~~t 172 (406)
T PRK07424 97 WLGVLYTLTFLFGAIARGL-GLPNADELTDLTHLPGP-FET-LPSQW-FVNRPYHWRHHFDNQNAYYCGTFTLVDKLMGT 172 (406)
T ss_pred hhhhHHHHHHHHHHHHHhc-ccccccccccccCCCCc-ccC-CCccC-eecCceeEEEEeccccceeeeeEEEeehhcCc
Confidence 0111111111 11111 11122 11111 1321 111 22334 467899999998865 7779889999999999
Q ss_pred CC
Q 006722 273 VD 274 (633)
Q Consensus 273 ~~ 274 (633)
..
T Consensus 173 a~ 174 (406)
T PRK07424 173 AL 174 (406)
T ss_pred cc
Confidence 64
No 23
>PRK09186 flagellin modification protein A; Provisional
Probab=96.84 E-value=0.0029 Score=63.39 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=38.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 5 k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l 48 (256)
T PRK09186 5 KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESL 48 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHH
Confidence 67999999999999999999999999998 8888888777765
No 24
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.84 E-value=0.0022 Score=67.77 Aligned_cols=42 Identities=24% Similarity=0.468 Sum_probs=38.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+++||.++|..|+++|.++.+ |+.+|++++++++
T Consensus 13 kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l 56 (282)
T KOG1205|consen 13 KVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEEL 56 (282)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHH
Confidence 67899999999999999999999999777 8899999887775
No 25
>PRK06196 oxidoreductase; Provisional
Probab=96.84 E-value=0.0025 Score=67.01 Aligned_cols=55 Identities=16% Similarity=0.225 Sum_probs=45.5
Q ss_pred HHHHHHhcCCCCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 440 AVAVVINSIPKGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 440 taavv~~~i~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
++..+++.++..-+.|+++||||+||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 14 ~~~~~~~~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l 70 (315)
T PRK06196 14 TAEEVLAGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI 70 (315)
T ss_pred cHHHHhcCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 355556665544478999999999999999999999999998 8888888877665
No 26
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.79 E-value=0.0019 Score=71.60 Aligned_cols=152 Identities=18% Similarity=0.296 Sum_probs=91.5
Q ss_pred CccEEEEeccCccHHHHHHHHHhhcCc-EEEe--cChhHHHHHHHHhCCcccc-chhhhcccCcceEE--EEc---CcCC
Q 006722 451 GTTQVVLRGALTKVAYAIAFALCQKGI-QVVT--LREDEHEKLRKSFGAKSEC-NNLLLSRSYSQKIW--LVG---KGLT 521 (633)
Q Consensus 451 ~~~~V~~~Gatgkig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~l~~~~~~-~~l~~~~~~~~~vw--~vg---~~~~ 521 (633)
.-++|+++|+ |.+|+.++++|..+|. +|++ |+.++.+.+++++|..... ..+.+... .+|++ ..| -.++
T Consensus 181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~-~aDvVI~aT~s~~~~i~ 258 (423)
T PRK00045 181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALA-EADIVISSTGAPHPIIG 258 (423)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhc-cCCEEEECCCCCCcEEc
Confidence 3379999998 9999999999999997 6777 8889999999998542211 22222221 33443 222 1344
Q ss_pred HHHHhhC-----CCCceeecccccCCCcccCCCCceeecCcccccCC----ccccccc-cccCCCcchhhhHhhhhhhh-
Q 006722 522 EEEQSKA-----KKGTIFIPFSQFPPNDKKIRKDCMYHLTPAMAVPA----AFENVDS-CENWLPRRVMSAWRIGGIVH- 590 (633)
Q Consensus 522 ~~~q~~a-----~~G~~f~~~~~~~~~~~~~R~dc~y~~~~a~~~p~----~~~~~~~-~e~~~p~~~~~Ac~a~~~v~- 590 (633)
+++-..+ .++.+++|.+ +|+.. -+++ -.+|+ +++.+.. ++.....|.-.+-.|+.||-
T Consensus 259 ~~~l~~~~~~~~~~~~vviDla-~Prdi---d~~v-------~~l~~v~l~~vDdl~~~~~~n~~~r~~~~~~a~~ii~~ 327 (423)
T PRK00045 259 KGMVERALKARRHRPLLLVDLA-VPRDI---EPEV-------GELPGVYLYDVDDLQEIVEENLAQRQEAAEKAEAIVEE 327 (423)
T ss_pred HHHHHHHHhhccCCCeEEEEeC-CCCCC---cccc-------cccCCeEEEEHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 4432222 3568899998 77763 1111 11222 1222222 44566778888889998874
Q ss_pred ---hccCCCcc-ccCccc----ccHHHHHHHHH
Q 006722 591 ---ALEGWNEH-ECGYAI----SNIHNVWEAAL 615 (633)
Q Consensus 591 ---alEgw~~~-e~G~~i----~~i~~i~~aa~ 615 (633)
.++.|... .....| ++.++|-+.-+
T Consensus 328 ~~~~f~~~~~~~~~~p~I~~lr~~~~~i~~~el 360 (423)
T PRK00045 328 EVAEFMEWLRSLEVVPTIRALREQAEEIREEEL 360 (423)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 57777555 555544 55655544443
No 27
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.76 E-value=0.0021 Score=61.49 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=32.0
Q ss_pred EEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHH
Q 006722 455 VVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEK 489 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~ 489 (633)
|+|+||||.+|+.+++.|.++|.+|.. |++++.++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~ 37 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED 37 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc
Confidence 789999999999999999999999998 88887665
No 28
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.0023 Score=67.52 Aligned_cols=42 Identities=19% Similarity=0.264 Sum_probs=38.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||||+||+++|+.|+++|.+|.+ |++++.++..+++
T Consensus 15 k~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l 58 (313)
T PRK05854 15 KRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAI 58 (313)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 67999999999999999999999999998 9988888777665
No 29
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.0023 Score=64.18 Aligned_cols=41 Identities=22% Similarity=0.406 Sum_probs=37.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+.|+++||||+||+++|+.|+++|.+|.+ |++++.++++++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence 46899999999999999999999999988 999998888765
No 30
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.68 E-value=0.0072 Score=56.61 Aligned_cols=126 Identities=22% Similarity=0.199 Sum_probs=73.5
Q ss_pred cCChhHHHHHHhcCCCCccEEEEeccCccHHHHHHHHHhhcC-cEEEe--cChhHHHHHHHHhCCc---cccchhhhccc
Q 006722 435 DGSSLAVAVVINSIPKGTTQVVLRGALTKVAYAIAFALCQKG-IQVVT--LREDEHEKLRKSFGAK---SECNNLLLSRS 508 (633)
Q Consensus 435 ~Gnsltaavv~~~i~~~~~~V~~~Gatgkig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~l~~~---~~~~~l~~~~~ 508 (633)
||-.+..|.--..+....++|.++|+ |.+|+++|+.|++.| .+|.+ |+.++.+++.++++.. .......+..
T Consensus 2 d~~g~~~a~~~~~~~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (155)
T cd01065 2 DGLGFVRALEEAGIELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELL- 79 (155)
T ss_pred CHHHHHHHHHhhCCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhcc-
Confidence 34344444433333345578999998 999999999999985 67777 8899999998887432 1112222221
Q ss_pred CcceEEEE--cCcC---CH--HHHhhCCCCceeecccccCCCc---ccCC-CCceeecCcccccC
Q 006722 509 YSQKIWLV--GKGL---TE--EEQSKAKKGTIFIPFSQFPPND---KKIR-KDCMYHLTPAMAVP 562 (633)
Q Consensus 509 ~~~~vw~v--g~~~---~~--~~q~~a~~G~~f~~~~~~~~~~---~~~R-~dc~y~~~~a~~~p 562 (633)
.++++++. .... ++ ..-..+++|+.++|.+-+|+.. .+.| ..|.+..+..|-+.
T Consensus 80 ~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~~l~~~~~~~g~~~v~g~~~~~~ 144 (155)
T cd01065 80 AEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLETPLLKEARALGAKTIDGLEMLVY 144 (155)
T ss_pred ccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCCHHHHHHHHCCCceeCCHHHHHH
Confidence 14445422 1111 00 0012367888888888666521 1223 56666666655443
No 31
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.0028 Score=63.99 Aligned_cols=42 Identities=24% Similarity=0.297 Sum_probs=38.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 8 k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~ 51 (260)
T PRK07063 8 KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAI 51 (260)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 67999999999999999999999999988 8999999888876
No 32
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.0029 Score=64.40 Aligned_cols=43 Identities=26% Similarity=0.387 Sum_probs=39.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
+.|+++||+|+||+++|+.|+++|.+|++ |+.++.+++.+++|
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG 51 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 68999999999999999999999999998 88888888888863
No 33
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.0036 Score=62.83 Aligned_cols=44 Identities=25% Similarity=0.314 Sum_probs=39.6
Q ss_pred CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 451 GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 451 ~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
.-+.|+++||+|.||+++|+.|+++|.+|++ |++++++++++++
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 53 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEI 53 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 3478999999999999999999999999988 8999988887775
No 34
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.0032 Score=63.21 Aligned_cols=42 Identities=17% Similarity=0.251 Sum_probs=38.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||||.||+++|+.|+++|.+|++ |++++.+++.+++
T Consensus 6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (258)
T PRK07890 6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEI 49 (258)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 57999999999999999999999999998 8888888887776
No 35
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.61 E-value=0.0035 Score=72.04 Aligned_cols=60 Identities=25% Similarity=0.292 Sum_probs=50.3
Q ss_pred cCChhHHHHHHhcCCCCc-----cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 435 DGSSLAVAVVINSIPKGT-----TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 435 ~Gnsltaavv~~~i~~~~-----~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
.|.+.....+.+.+|+.. +.|+|+||+|+||+++++.|+++|.+|.+ |+.++.+.+.+++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l 124 (576)
T PLN03209 58 SGATKFSSAAIEAIPKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSV 124 (576)
T ss_pred ccchhhhhhhhhccccccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence 366666777888888633 68999999999999999999999999987 9999988876654
No 36
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.0043 Score=62.12 Aligned_cols=41 Identities=32% Similarity=0.409 Sum_probs=33.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cCh-hHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LRE-DEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~ 493 (633)
+.|+++||+|.||+++|+.|+++|.+|++ |++ ++++++.++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~ 45 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ 45 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc
Confidence 47999999999999999999999999988 655 555554443
No 37
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.0034 Score=64.20 Aligned_cols=42 Identities=17% Similarity=0.306 Sum_probs=38.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||+|+||+++|+.|+++|.+|.+ |++++++++++++
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 52 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKI 52 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57899999999999999999999999998 8999988888776
No 38
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.0035 Score=63.94 Aligned_cols=43 Identities=26% Similarity=0.319 Sum_probs=39.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
+.|+|+||||+||+++|+.|+++|.+|.+ |++++.+++.++++
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG 50 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 57999999999999999999999999988 99999988887763
No 39
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.0035 Score=63.14 Aligned_cols=43 Identities=28% Similarity=0.366 Sum_probs=39.0
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
-+.|+++||+|+||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 53 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEI 53 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 368999999999999999999999999998 8888888887775
No 40
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.0038 Score=62.83 Aligned_cols=42 Identities=24% Similarity=0.358 Sum_probs=38.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||+|+||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 50 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEI 50 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57999999999999999999999999998 8899988887775
No 41
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.55 E-value=0.0029 Score=67.72 Aligned_cols=49 Identities=20% Similarity=0.325 Sum_probs=42.9
Q ss_pred cCCCCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 447 SIPKGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 447 ~i~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
.++-.-+.++|+|||++||+++|+.|+++|.+|.| ||.++-++.+++|.
T Consensus 30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~ 80 (314)
T KOG1208|consen 30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQ 80 (314)
T ss_pred cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH
Confidence 33333378899999999999999999999999999 99999999999983
No 42
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.53 E-value=0.0058 Score=65.07 Aligned_cols=151 Identities=19% Similarity=0.222 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceEEeeCCCCcceeecCChhHHHHHHhcCCC-----CccEEEEe
Q 006722 384 SINRLIEEAILEAEEKGAKVISLGLMNQGEELNRYGGVFVHKHPQLKMKVVDGSSLAVAVVINSIPK-----GTTQVVLR 458 (633)
Q Consensus 384 ~in~~i~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~L~irvv~Gnsltaavv~~~i~~-----~~~~V~~~ 458 (633)
-|=.++.+|...|++.|.-=-- ||. |=.. -+.+.|.-.-+..+-.|..=++..+++...+ .-++|+++
T Consensus 112 qIlgQvk~A~~~a~~~g~~~~~---L~~---lf~~-a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~Vi 184 (311)
T cd05213 112 QILGQVKNAYKLAKEAGTSGKL---LNR---LFQK-AIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVI 184 (311)
T ss_pred HHHHHHHHHHHHHHHcCCchHH---HHH---HHHH-HHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEE
Confidence 3445568999999988762111 111 1111 2333342222344444443333334444433 34899999
Q ss_pred ccCccHHHHHHHHHhhcC-cEEEe--cChhHHHHHHHHhCCcccc-chhhhcccCcceEE--EEcCcCCHH--HH--hhC
Q 006722 459 GALTKVAYAIAFALCQKG-IQVVT--LREDEHEKLRKSFGAKSEC-NNLLLSRSYSQKIW--LVGKGLTEE--EQ--SKA 528 (633)
Q Consensus 459 Gatgkig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~l~~~~~~-~~l~~~~~~~~~vw--~vg~~~~~~--~q--~~a 528 (633)
|+ |.+|+.+++.|+++| .+|++ |+.++.+++++++|..... +.+.+... .+|++ .+|..-..+ ++ ...
T Consensus 185 Ga-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~-~aDvVi~at~~~~~~~~~~~~~~~~ 262 (311)
T cd05213 185 GA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLN-EADVVISATGAPHYAKIVERAMKKR 262 (311)
T ss_pred Cc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHh-cCCEEEECCCCCchHHHHHHHHhhC
Confidence 98 999999999999875 56766 8899999999998653222 22333221 34554 333222101 11 112
Q ss_pred -CCCceeecccccCCCc
Q 006722 529 -KKGTIFIPFSQFPPND 544 (633)
Q Consensus 529 -~~G~~f~~~~~~~~~~ 544 (633)
.+|.+++|.+ +|+..
T Consensus 263 ~~~~~~viDla-vPrdi 278 (311)
T cd05213 263 SGKPRLIVDLA-VPRDI 278 (311)
T ss_pred CCCCeEEEEeC-CCCCC
Confidence 2688999999 77664
No 43
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.0039 Score=65.15 Aligned_cols=42 Identities=26% Similarity=0.392 Sum_probs=38.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ |+.++++++.+++
T Consensus 41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l 84 (293)
T PRK05866 41 KRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRI 84 (293)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 68999999999999999999999999998 9999988887775
No 44
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.0037 Score=66.88 Aligned_cols=42 Identities=24% Similarity=0.345 Sum_probs=39.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~ 51 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEEC 51 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 68999999999999999999999999999 9999999888775
No 45
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.50 E-value=0.0047 Score=65.11 Aligned_cols=60 Identities=15% Similarity=0.261 Sum_probs=43.3
Q ss_pred ecCChhHHHHHHhcCCCCccEEEEeccCccHHHHHHHHHhhcCcE-EEe--cCh---hHHHHHHHHh
Q 006722 434 VDGSSLAVAVVINSIPKGTTQVVLRGALTKVAYAIAFALCQKGIQ-VVT--LRE---DEHEKLRKSF 494 (633)
Q Consensus 434 v~Gnsltaavv~~~i~~~~~~V~~~Gatgkig~ava~~L~~~~~~-v~l--~~~---~~~~~l~~~l 494 (633)
|||.-...+.--......-+.|+++|| |++|+|+|..|++.|.+ |.+ |+. ++.+++.+++
T Consensus 108 TD~~G~~~~l~~~~~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l 173 (289)
T PRK12548 108 TDGLGFVRNLREHGVDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI 173 (289)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence 555555444432222223378999999 89999999999999986 877 775 7788887776
No 46
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.0043 Score=64.69 Aligned_cols=43 Identities=28% Similarity=0.390 Sum_probs=40.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ |++++++++.++++
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~ 54 (296)
T PRK05872 10 KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELG 54 (296)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 68999999999999999999999999988 99999999999884
No 47
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.48 E-value=0.0041 Score=62.99 Aligned_cols=41 Identities=27% Similarity=0.402 Sum_probs=37.6
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+|+++||+|+||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 44 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKEL 44 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 6899999999999999999999999998 8888888887776
No 48
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.46 E-value=0.0049 Score=57.66 Aligned_cols=42 Identities=21% Similarity=0.330 Sum_probs=35.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhc-CcEEEe--cC--hhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQK-GIQVVT--LR--EDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~-~~~v~l--~~--~~~~~~l~~~l 494 (633)
|.|+++||+|.||+++|+.|+++ +.+|.+ |+ .++.+++.+++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l 47 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQEL 47 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccc
Confidence 57899999999999999999999 556666 77 77888777776
No 49
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.43 E-value=0.005 Score=62.03 Aligned_cols=42 Identities=21% Similarity=0.347 Sum_probs=37.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
++|+++||+|.||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i 54 (255)
T PRK07523 11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESL 54 (255)
T ss_pred CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 68999999999999999999999999998 8888887776665
No 50
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.0049 Score=62.11 Aligned_cols=42 Identities=7% Similarity=0.151 Sum_probs=38.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||+++||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i 49 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQC 49 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 67999999999999999999999999999 9999988887665
No 51
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.0093 Score=59.46 Aligned_cols=42 Identities=21% Similarity=0.350 Sum_probs=37.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++|++|+||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 7 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (241)
T PRK07454 7 PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAEL 50 (241)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 67999999999999999999999999998 8888877776664
No 52
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.0055 Score=61.03 Aligned_cols=43 Identities=16% Similarity=0.270 Sum_probs=38.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |++++.+++++++|
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELG 51 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC
Confidence 57999999999999999999999999988 88888888888864
No 53
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.40 E-value=0.0053 Score=61.78 Aligned_cols=43 Identities=12% Similarity=0.356 Sum_probs=38.4
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
-+.++++||+|+||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l 53 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKL 53 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHH
Confidence 367999999999999999999999999999 8888888777765
No 54
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.0049 Score=61.62 Aligned_cols=41 Identities=27% Similarity=0.348 Sum_probs=37.6
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+|+++||+|+||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~ 44 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL 44 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 5899999999999999999999999988 8999998887775
No 55
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.0051 Score=62.26 Aligned_cols=42 Identities=19% Similarity=0.285 Sum_probs=38.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |+.++.+++++++
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 46 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARL 46 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 57999999999999999999999999998 8888888887775
No 56
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.39 E-value=0.0053 Score=62.22 Aligned_cols=42 Identities=17% Similarity=0.301 Sum_probs=39.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 7 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (263)
T PRK06200 7 QVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF 50 (263)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 57999999999999999999999999988 9999999998876
No 57
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.0053 Score=62.04 Aligned_cols=42 Identities=19% Similarity=0.320 Sum_probs=38.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||||.||+++|+.|+++|.+|.+ |++++.+++++++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 45 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL 45 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence 46899999999999999999999999998 9999999988876
No 58
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.0052 Score=63.48 Aligned_cols=42 Identities=14% Similarity=0.279 Sum_probs=37.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+|+||+|.||+++|+.|+++|.+|++ |++++++++.+++
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l 50 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHL 50 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57999999999999999999999999998 8888888777665
No 59
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.37 E-value=0.0055 Score=61.14 Aligned_cols=42 Identities=33% Similarity=0.412 Sum_probs=37.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||||.||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 45 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVA 45 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999999999999999999999988 8888888877765
No 60
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.37 E-value=0.0058 Score=61.02 Aligned_cols=42 Identities=17% Similarity=0.307 Sum_probs=36.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|+++|.+|++ |++++.+++.+++
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 49 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI 49 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 57999999999999999999999999765 7787777766654
No 61
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.37 E-value=0.0053 Score=62.31 Aligned_cols=42 Identities=17% Similarity=0.238 Sum_probs=38.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ |++++.++++++.
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~ 49 (262)
T TIGR03325 6 EVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH 49 (262)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc
Confidence 68999999999999999999999999998 8888888887764
No 62
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.36 E-value=0.0056 Score=61.72 Aligned_cols=42 Identities=19% Similarity=0.237 Sum_probs=38.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 50 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI 50 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh
Confidence 57999999999999999999999999988 9999998888876
No 63
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.36 E-value=0.0058 Score=61.11 Aligned_cols=42 Identities=24% Similarity=0.449 Sum_probs=38.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|.++|.+|.+ |++++.+++++++
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 48 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEAL 48 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 57999999999999999999999999988 8888888877765
No 64
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.0049 Score=63.40 Aligned_cols=41 Identities=20% Similarity=0.299 Sum_probs=37.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ |+.+++++++++
T Consensus 5 k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~ 47 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE 47 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC
Confidence 57999999999999999999999999998 888988888764
No 65
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.34 E-value=0.006 Score=60.71 Aligned_cols=42 Identities=21% Similarity=0.352 Sum_probs=38.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||||.||+++|+.|.++|.+|++ |+.++.+++.+++
T Consensus 6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (251)
T PRK07231 6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEI 49 (251)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57999999999999999999999999988 8888888877776
No 66
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.0058 Score=61.91 Aligned_cols=42 Identities=17% Similarity=0.199 Sum_probs=38.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||+|+||+++|+.|+++|.+|.+ |+.++++++.+++
T Consensus 9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 52 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARL 52 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 67999999999999999999999999988 8888888777665
No 67
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.34 E-value=0.022 Score=55.75 Aligned_cols=88 Identities=16% Similarity=0.197 Sum_probs=58.7
Q ss_pred ChhHHHHHHhcCCCCc--cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcce
Q 006722 437 SSLAVAVVINSIPKGT--TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQK 512 (633)
Q Consensus 437 nsltaavv~~~i~~~~--~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~ 512 (633)
-++++.-.++++..+. ++|+|+|+..-+|..+|.+|.++|.+|++ |+. +++++.+ ++. |..
T Consensus 27 ~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---~~l~~~l---~~a---------DiV 91 (168)
T cd01080 27 TPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---KNLKEHT---KQA---------DIV 91 (168)
T ss_pred hHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---hhHHHHH---hhC---------CEE
Confidence 3455555566665444 89999999555799999999999999888 443 3333333 111 222
Q ss_pred EEEEc--CcCCHHHHhhCCCCceeecccccCCC
Q 006722 513 IWLVG--KGLTEEEQSKAKKGTIFIPFSQFPPN 543 (633)
Q Consensus 513 vw~vg--~~~~~~~q~~a~~G~~f~~~~~~~~~ 543 (633)
|-.+| +.+++++ +++|++++|++ +|+.
T Consensus 92 Isat~~~~ii~~~~---~~~~~viIDla-~prd 120 (168)
T cd01080 92 IVAVGKPGLVKGDM---VKPGAVVIDVG-INRV 120 (168)
T ss_pred EEcCCCCceecHHH---ccCCeEEEEcc-CCCc
Confidence 22221 2456665 88899999999 8886
No 68
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.0057 Score=62.44 Aligned_cols=42 Identities=19% Similarity=0.303 Sum_probs=38.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
++|+|+||+|.||+++|+.|+++|.+|.+ |++++.++++++.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~ 46 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY 46 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 57999999999999999999999999988 8888888888765
No 69
>PRK08643 acetoin reductase; Validated
Probab=96.33 E-value=0.0061 Score=61.32 Aligned_cols=42 Identities=21% Similarity=0.360 Sum_probs=37.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||+|.||+++|+.|+++|.+|.+ |+.++.+++++++
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 46 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKL 46 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999999999999999999999988 8888888887776
No 70
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.0064 Score=60.64 Aligned_cols=42 Identities=19% Similarity=0.292 Sum_probs=38.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++|++|.||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 7 k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (239)
T PRK08703 7 KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAI 50 (239)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH
Confidence 68999999999999999999999999998 9998888887775
No 71
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.32 E-value=0.013 Score=66.71 Aligned_cols=118 Identities=18% Similarity=0.198 Sum_probs=74.9
Q ss_pred HHHHHcCCc--EEEecccccc------cccccCCceEEeeCCCCcceeecCChhHHHHHHhcCCC-----------Cc--
Q 006722 394 LEAEEKGAK--VISLGLMNQG------EELNRYGGVFVHKHPQLKMKVVDGSSLAVAVVINSIPK-----------GT-- 452 (633)
Q Consensus 394 ~~A~k~G~k--v~~LG~ln~~------e~ln~~g~~~~~k~p~L~irvv~Gnsltaavv~~~i~~-----------~~-- 452 (633)
..+++.+++ +++...+++. +.+|..| +.++.-|++..= ++ . +.-+++|.- |.
T Consensus 171 ~~v~~~~~~~iiiAips~~~~~~~~i~~~l~~~~-~~v~~lP~~~~l-~~----~-~~~lreI~ieDLLgR~pV~~d~~~ 243 (588)
T COG1086 171 RVVEELGIQLILIAIPSASQEERRRILLRLARTG-IAVRILPQLTDL-KD----L-NGQLREIEIEDLLGRPPVALDTEL 243 (588)
T ss_pred HHHHHcCCceEEEecCCCCHHHHHHHHHHHHhcC-CcEEecCcHHHH-HH----h-ccccccCCHHHHhCCCCCCCCHHH
Confidence 346677777 6666666665 5677775 777777776511 11 1 111444421 11
Q ss_pred -------cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHhCCccccchhhhcccCcceE-EEEcCcCC
Q 006722 453 -------TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSFGAKSECNNLLLSRSYSQKI-WLVGKGLT 521 (633)
Q Consensus 453 -------~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~v-w~vg~~~~ 521 (633)
++|+++||||+||+.+|+-+++.+.+.++ +++-....+++++ .+... +.++ -..||.-|
T Consensus 244 i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el--~~~~~--------~~~~~~~igdVrD 313 (588)
T COG1086 244 IGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMEL--REKFP--------ELKLRFYIGDVRD 313 (588)
T ss_pred HHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHH--HhhCC--------CcceEEEeccccc
Confidence 89999999999999999999998766665 7777777777776 21111 2334 46677776
Q ss_pred HHHHhhC
Q 006722 522 EEEQSKA 528 (633)
Q Consensus 522 ~~~q~~a 528 (633)
.+--..+
T Consensus 314 ~~~~~~~ 320 (588)
T COG1086 314 RDRVERA 320 (588)
T ss_pred HHHHHHH
Confidence 6553333
No 72
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.29 E-value=0.0062 Score=64.11 Aligned_cols=43 Identities=26% Similarity=0.359 Sum_probs=39.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
+.|+++||+|+||+++|+.|+++|.+|++ |++++.+++.++++
T Consensus 7 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~ 51 (322)
T PRK07453 7 GTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELG 51 (322)
T ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh
Confidence 57999999999999999999999999988 89999988888773
No 73
>PRK06194 hypothetical protein; Provisional
Probab=96.28 E-value=0.0063 Score=62.39 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=37.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+|+||+|.||+++|+.|+++|.+|++ |+.++++++.+++
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAEL 50 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Confidence 57999999999999999999999999988 8888887777665
No 74
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.0071 Score=59.91 Aligned_cols=42 Identities=24% Similarity=0.343 Sum_probs=38.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||||.||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAEL 50 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHH
Confidence 57999999999999999999999999988 8888888887776
No 75
>PRK12742 oxidoreductase; Provisional
Probab=96.28 E-value=0.0076 Score=59.69 Aligned_cols=43 Identities=23% Similarity=0.302 Sum_probs=37.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l~ 495 (633)
+.|+++||+|+||+++|+.|.++|.+|.+ +++++.+++.++++
T Consensus 7 k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~ 52 (237)
T PRK12742 7 KKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG 52 (237)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC
Confidence 68999999999999999999999999876 46778888877753
No 76
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.007 Score=60.50 Aligned_cols=42 Identities=21% Similarity=0.388 Sum_probs=37.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 46 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAEL 46 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999999999999999999999988 8889888887665
No 77
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.0064 Score=64.95 Aligned_cols=42 Identities=33% Similarity=0.375 Sum_probs=38.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 9 k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l 52 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEI 52 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 67999999999999999999999999988 9999998887775
No 78
>PLN00203 glutamyl-tRNA reductase
Probab=96.26 E-value=0.012 Score=67.01 Aligned_cols=212 Identities=17% Similarity=0.237 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHHcCCcEEEec-ccccccccccCCceEEeeCCCCcceeecCChhHHHHHHhcC----CC---CccEEE
Q 006722 385 INRLIEEAILEAEEKGAKVISLG-LMNQGEELNRYGGVFVHKHPQLKMKVVDGSSLAVAVVINSI----PK---GTTQVV 456 (633)
Q Consensus 385 in~~i~~Ai~~A~k~G~kv~~LG-~ln~~e~ln~~g~~~~~k~p~L~irvv~Gnsltaavv~~~i----~~---~~~~V~ 456 (633)
|=.+|-+|...|++.|.- | .||. |=.. .+.+.|.-.-+..+-.|..=.+.++++-. +. ..++|+
T Consensus 199 IlgQVK~A~~~A~~~g~~----g~~L~~---LF~~-Ai~~~KrVRteT~I~~~~vSv~s~Av~la~~~~~~~~l~~kkVl 270 (519)
T PLN00203 199 ILAQVKQVVKVGQGVDGF----GRNLSG---LFKH-AITAGKRVRTETNIASGAVSVSSAAVELALMKLPESSHASARVL 270 (519)
T ss_pred HHHHHHHHHHHHHHcCCc----cHHHHH---HHHH-HHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhcCCCCCCCCEEE
Confidence 334567888888887742 2 1111 1111 44445533333555555543333333332 32 248999
Q ss_pred EeccCccHHHHHHHHHhhcCc-EEEe--cChhHHHHHHHHhCCccc---c-chhhhcccCcceEEEEc----C-cCCHHH
Q 006722 457 LRGALTKVAYAIAFALCQKGI-QVVT--LREDEHEKLRKSFGAKSE---C-NNLLLSRSYSQKIWLVG----K-GLTEEE 524 (633)
Q Consensus 457 ~~Gatgkig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~l~~~~~---~-~~l~~~~~~~~~vw~vg----~-~~~~~~ 524 (633)
|+|| |++|+++++.|+.+|. +|++ |+.++.+.++++++.... . ..+.+.. .++|+++.- + .++++.
T Consensus 271 VIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al-~~aDVVIsAT~s~~pvI~~e~ 348 (519)
T PLN00203 271 VIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACA-AEADVVFTSTSSETPLFLKEH 348 (519)
T ss_pred EEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHH-hcCCEEEEccCCCCCeeCHHH
Confidence 9999 9999999999999986 5777 999999999998731111 1 1222222 144554221 2 456665
Q ss_pred HhhCCC-------CceeecccccCCCcccCCCCceeecCcccc--cCCccccccccccCCCcchhhhHhhhhhh----hh
Q 006722 525 QSKAKK-------GTIFIPFSQFPPNDKKIRKDCMYHLTPAMA--VPAAFENVDSCENWLPRRVMSAWRIGGIV----HA 591 (633)
Q Consensus 525 q~~a~~-------G~~f~~~~~~~~~~~~~R~dc~y~~~~a~~--~p~~~~~~~~~e~~~p~~~~~Ac~a~~~v----~a 591 (633)
-+.+++ ..+|+|.+ +|+.+ ++|. .+.+.+. =-+|++.+ ++-.+..|.-.+=.|+.|| ..
T Consensus 349 l~~~~~~~~~~~~~~~~IDLA-vPRdI----dp~v-~~l~~v~lydiDdL~~i--~~~n~~~R~~~~~~Ae~II~ee~~~ 420 (519)
T PLN00203 349 VEALPPASDTVGGKRLFVDIS-VPRNV----GACV-SELESARVYNVDDLKEV--VAANKEDRLRKAMEAQTIIREESKN 420 (519)
T ss_pred HHHhhhcccccCCCeEEEEeC-CCCCC----cccc-ccCCCCeEEEeccHHHH--HHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 455543 25899999 98875 1111 1111111 11134432 5556777776666677765 56
Q ss_pred ccCCCcc-ccCccc----ccHHHHHHHH
Q 006722 592 LEGWNEH-ECGYAI----SNIHNVWEAA 614 (633)
Q Consensus 592 lEgw~~~-e~G~~i----~~i~~i~~aa 614 (633)
++.|... +....| ++.+.|-+.-
T Consensus 421 F~~w~~~~~~~p~I~~lr~~~~~i~~~E 448 (519)
T PLN00203 421 FEAWRDSLETVPTIKKLRSYAERIRAAE 448 (519)
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 8888766 666555 5665555443
No 79
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.25 E-value=0.042 Score=61.36 Aligned_cols=139 Identities=17% Similarity=0.179 Sum_probs=85.5
Q ss_pred CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEE--EEc--CcCCHHH
Q 006722 451 GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIW--LVG--KGLTEEE 524 (633)
Q Consensus 451 ~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw--~vg--~~~~~~~ 524 (633)
.-++|+|+|. |.||+.+|+.|...|.+|++ +++.+....... |.. ...+.+..+ .+|++ ..| +.++.+.
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~-G~~--v~~l~eal~-~aDVVI~aTG~~~vI~~~~ 285 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMD-GFR--VMTMEEAAE-LGDIFVTATGNKDVITAEH 285 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc-CCE--ecCHHHHHh-CCCEEEECCCCHHHHHHHH
Confidence 3478999996 89999999999999999999 555554332222 322 212333332 44554 334 2466677
Q ss_pred HhhCCCCceeecccccCCC------------cccCCCCceeecCcc---ccc--CCccccccccccCCCcchhhhHhhhh
Q 006722 525 QSKAKKGTIFIPFSQFPPN------------DKKIRKDCMYHLTPA---MAV--PAAFENVDSCENWLPRRVMSAWRIGG 587 (633)
Q Consensus 525 q~~a~~G~~f~~~~~~~~~------------~~~~R~dc~y~~~~a---~~~--p~~~~~~~~~e~~~p~~~~~Ac~a~~ 587 (633)
...+++|++++-+..++.+ +.+.|+.+.-...|. +.| -+.+-|+ .|..+.|..+|.--+|.=
T Consensus 286 ~~~mK~GailiNvG~~d~Eid~~~L~~~~~~~~~v~~~v~~y~~~~g~~i~lLa~GrlvNl-~~~~ghp~~vmd~sfa~q 364 (425)
T PRK05476 286 MEAMKDGAILANIGHFDNEIDVAALEELAVKWREIKPQVDEYTLPDGKRIILLAEGRLVNL-GAATGHPSEVMDMSFANQ 364 (425)
T ss_pred HhcCCCCCEEEEcCCCCCccChHHHhhcCcceeecCCCceEEEeCCCCEEEEEeCCccccc-CCCCCCcceeeCHHHHHH
Confidence 7889999999998876642 122343333222221 221 1236668 899999999997766554
Q ss_pred hhhhccCC
Q 006722 588 IVHALEGW 595 (633)
Q Consensus 588 ~v~alEgw 595 (633)
.+-+++=|
T Consensus 365 ~l~~~~l~ 372 (425)
T PRK05476 365 ALAQIELF 372 (425)
T ss_pred HHHHHHHH
Confidence 44444444
No 80
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.24 E-value=0.021 Score=60.62 Aligned_cols=87 Identities=18% Similarity=0.215 Sum_probs=59.2
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc-chhhhcccCcceEEE--Ec-CcCCHHHH
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC-NNLLLSRSYSQKIWL--VG-KGLTEEEQ 525 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~-~~l~~~~~~~~~vw~--vg-~~~~~~~q 525 (633)
-++|+++|+ |.+|++++..|.+.|.+|++ |+.++.+..+ ++|..... ..+.+..+ ++|+++ +. ..++++.-
T Consensus 152 g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~~~~~~l~~~l~-~aDiVI~t~p~~~i~~~~l 228 (296)
T PRK08306 152 GSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSPFHLSELAEEVG-KIDIIFNTIPALVLTKEVL 228 (296)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeeecHHHHHHHhC-CCCEEEECCChhhhhHHHH
Confidence 389999997 88999999999999999998 7777765554 45433222 23333331 344542 22 23566666
Q ss_pred hhCCCCceeecccccCC
Q 006722 526 SKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 526 ~~a~~G~~f~~~~~~~~ 542 (633)
..+++|++++|++ ..|
T Consensus 229 ~~~~~g~vIIDla-~~p 244 (296)
T PRK08306 229 SKMPPEALIIDLA-SKP 244 (296)
T ss_pred HcCCCCcEEEEEc-cCC
Confidence 6799999999999 444
No 81
>PRK08017 oxidoreductase; Provisional
Probab=96.24 E-value=0.0067 Score=60.80 Aligned_cols=40 Identities=18% Similarity=0.423 Sum_probs=35.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRK 492 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 492 (633)
+.|+|+||+|.||+++|+.|+++|.+|.+ |+.++++.+++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~ 44 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS 44 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh
Confidence 47999999999999999999999999988 88888877654
No 82
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.0074 Score=60.90 Aligned_cols=42 Identities=19% Similarity=0.261 Sum_probs=38.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |++++.+++++++
T Consensus 8 ~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (255)
T PRK06057 8 RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV 51 (255)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc
Confidence 68999999999999999999999999988 8888888887776
No 83
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.0073 Score=63.03 Aligned_cols=42 Identities=31% Similarity=0.335 Sum_probs=36.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|+++|.+|++ |+.++.++..+++
T Consensus 17 k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l 60 (306)
T PRK06197 17 RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARI 60 (306)
T ss_pred CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 78999999999999999999999999877 8888776655444
No 84
>PRK05599 hypothetical protein; Provisional
Probab=96.21 E-value=0.0072 Score=61.15 Aligned_cols=40 Identities=28% Similarity=0.458 Sum_probs=36.5
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
.|+++||+++||+++|+.|+ +|.+|++ |++++++++.+++
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l 43 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDL 43 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHH
Confidence 58999999999999999999 5999999 9999999888776
No 85
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.20 E-value=0.008 Score=60.49 Aligned_cols=44 Identities=18% Similarity=0.255 Sum_probs=38.8
Q ss_pred CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 451 GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 451 ~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
.-+.|+++||+|.||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 55 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAAL 55 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Confidence 3478999999999999999999999999999 8888887777665
No 86
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.0071 Score=62.09 Aligned_cols=42 Identities=19% Similarity=0.186 Sum_probs=38.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+|+||+|+||+++|+.|.++|.+|.+ |+.++.+.+++..
T Consensus 5 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~ 48 (277)
T PRK06180 5 KTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH 48 (277)
T ss_pred CEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc
Confidence 57999999999999999999999999998 8899888887763
No 87
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.18 E-value=0.008 Score=61.02 Aligned_cols=42 Identities=19% Similarity=0.430 Sum_probs=36.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ +++++.+++.+++
T Consensus 9 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 53 (260)
T PRK08416 9 KTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDL 53 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 68999999999999999999999999987 5677777766554
No 88
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.18 E-value=0.0083 Score=60.58 Aligned_cols=42 Identities=24% Similarity=0.317 Sum_probs=38.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i 56 (259)
T PRK08213 13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHL 56 (259)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 68999999999999999999999999988 8888888777665
No 89
>PRK08589 short chain dehydrogenase; Validated
Probab=96.16 E-value=0.008 Score=61.66 Aligned_cols=41 Identities=27% Similarity=0.344 Sum_probs=36.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ |+ ++.+++.+++
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~ 49 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKI 49 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHH
Confidence 57999999999999999999999999998 77 7777776665
No 90
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.15 E-value=0.0088 Score=60.19 Aligned_cols=41 Identities=22% Similarity=0.384 Sum_probs=37.7
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
.|+++||||.||+++|+.|+++|.+|.+ |++++.+++++++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 44 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL 44 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence 5899999999999999999999999998 8899988887776
No 91
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.0087 Score=60.30 Aligned_cols=42 Identities=19% Similarity=0.325 Sum_probs=37.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||+|+||+++|+.|+++|.+|.+ |+.++.+++++++
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~ 45 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI 45 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57899999999999999999999999988 8888888887765
No 92
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.0086 Score=59.86 Aligned_cols=42 Identities=19% Similarity=0.290 Sum_probs=36.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
++|+++||||.||+++|+.|+++|.+|++ |++++.+.+.+++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~ 45 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDL 45 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence 47899999999999999999999999988 8888877666554
No 93
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.0089 Score=60.61 Aligned_cols=42 Identities=26% Similarity=0.358 Sum_probs=38.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|++ |++++.+++++++
T Consensus 6 ~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (263)
T PRK09072 6 KRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL 49 (263)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 56999999999999999999999999998 8999998888875
No 94
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.0089 Score=59.98 Aligned_cols=42 Identities=24% Similarity=0.320 Sum_probs=38.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~ 52 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAI 52 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 67999999999999999999999999998 8888888877775
No 95
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.0087 Score=61.20 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=36.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||||+||+++|+.|+++|.+|++ |+++..+++.+++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~ 44 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADA 44 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 36899999999999999999999999888 8888877776654
No 96
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.13 E-value=0.01 Score=65.71 Aligned_cols=157 Identities=20% Similarity=0.210 Sum_probs=88.0
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcC-cEEEe--cChhHHHHHHHHhCCcccc-chhhhcccCcceEEEE--c---CcCCH
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKG-IQVVT--LREDEHEKLRKSFGAKSEC-NNLLLSRSYSQKIWLV--G---KGLTE 522 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~l~~~~~~-~~l~~~~~~~~~vw~v--g---~~~~~ 522 (633)
-++|+++|+ |.+|+.++++|.+.| .+|++ |+.++.+++.+++|..... +.+.+... .+|+++. | -.+++
T Consensus 180 ~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~-~aDvVi~aT~s~~~ii~~ 257 (417)
T TIGR01035 180 GKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLA-EADIVISSTGAPHPIVSK 257 (417)
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHh-hCCEEEECCCCCCceEcH
Confidence 378999997 999999999999998 66777 8889989899988543222 23332221 3444322 1 12444
Q ss_pred HHHhhC----CCCceeecccccCCCcccCCCCceeecCcccccCCccccccccccCCCcchhhhHhhhhhhh----hccC
Q 006722 523 EEQSKA----KKGTIFIPFSQFPPNDKKIRKDCMYHLTPAMAVPAAFENVDSCENWLPRRVMSAWRIGGIVH----ALEG 594 (633)
Q Consensus 523 ~~q~~a----~~G~~f~~~~~~~~~~~~~R~dc~y~~~~a~~~p~~~~~~~~~e~~~p~~~~~Ac~a~~~v~----alEg 594 (633)
++-..+ +.+.+++|.+ +|+.. =++|.-.++--.-.-++++.+ ++-....|.-.+=.|+.||- +++.
T Consensus 258 e~l~~~~~~~~~~~~viDla-~Prdi---d~~v~~l~~v~l~~vDdl~~~--~~~n~~~r~~~~~~a~~ii~~~~~~f~~ 331 (417)
T TIGR01035 258 EDVERALRERTRPLFIIDIA-VPRDV---DPAVARLEGVFLYDVDDLQPV--VEENLAERREEAEKAEEIVEEETAEFKQ 331 (417)
T ss_pred HHHHHHHhcCCCCeEEEEeC-CCCCC---ChhhcCcCCeEEEEHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443222 2456899998 77664 011100000000111123221 33355556656667888765 6777
Q ss_pred CCcc-ccCccc----ccHHHHHHHHHh
Q 006722 595 WNEH-ECGYAI----SNIHNVWEAALR 616 (633)
Q Consensus 595 w~~~-e~G~~i----~~i~~i~~aa~k 616 (633)
|... .+-..| +++++|-+.-++
T Consensus 332 w~~~~~~~p~I~~lr~~~~~i~~~el~ 358 (417)
T TIGR01035 332 WLRSLEVEPTIKALRSLAEIVREKELE 358 (417)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 7665 444434 555555444333
No 97
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.12 E-value=0.018 Score=60.80 Aligned_cols=137 Identities=20% Similarity=0.162 Sum_probs=77.2
Q ss_pred ecCChhHHHHHHhcCCCCccEEEEeccCccHHHHHHHHHhhcCc-EEEe--cChhHHHHHHHHhCCccc--c----chhh
Q 006722 434 VDGSSLAVAVVINSIPKGTTQVVLRGALTKVAYAIAFALCQKGI-QVVT--LREDEHEKLRKSFGAKSE--C----NNLL 504 (633)
Q Consensus 434 v~Gnsltaavv~~~i~~~~~~V~~~Gatgkig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~l~~~~~--~----~~l~ 504 (633)
|||-....+.--+.....-++|++.|| |++|+|+|..|++.|+ ++++ |+.+|-++|.++++.... . +.+.
T Consensus 109 TD~~G~~~~l~~~~~~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~ 187 (284)
T PRK12549 109 TDWSGFAESFRRGLPDASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLA 187 (284)
T ss_pred CCHHHHHHHHHhhccCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchH
Confidence 565555544421111223378999998 6699999999999987 6777 999999999988722111 0 1111
Q ss_pred hcccCcceEEE----EcCc---CCHHHHhhCCCCceeecccccCCCc---ccCC-CCceeecCcccccCCcccccccccc
Q 006722 505 LSRSYSQKIWL----VGKG---LTEEEQSKAKKGTIFIPFSQFPPND---KKIR-KDCMYHLTPAMAVPAAFENVDSCEN 573 (633)
Q Consensus 505 ~~~~~~~~vw~----vg~~---~~~~~q~~a~~G~~f~~~~~~~~~~---~~~R-~dc~y~~~~a~~~p~~~~~~~~~e~ 573 (633)
+.. .+++++| +|-. -.|-+...++++..+.|++--|+.. .+.| +-|....+..|-+= |+..++|.
T Consensus 188 ~~~-~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~ML~~---Qa~~~f~~ 263 (284)
T PRK12549 188 AAL-AAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLETELLRAARALGCRTLDGGGMAVF---QAVDAFEL 263 (284)
T ss_pred hhh-CCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCCHHHHHHHHCCCeEecCHHHHHH---HHHHHHHH
Confidence 111 1455543 2310 0111223577788888887433322 1112 55777777777653 33335555
Q ss_pred CC
Q 006722 574 WL 575 (633)
Q Consensus 574 ~~ 575 (633)
|.
T Consensus 264 wt 265 (284)
T PRK12549 264 FT 265 (284)
T ss_pred hc
Confidence 53
No 98
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.11 E-value=0.0087 Score=63.17 Aligned_cols=43 Identities=28% Similarity=0.318 Sum_probs=39.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcC-cEEEe--cChhHHHHHHHHhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKG-IQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~l~ 495 (633)
+.|+++||+|+||+++|+.|+++| .+|++ |++++.++++++++
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~ 49 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG 49 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence 478999999999999999999999 99988 89999988888874
No 99
>PRK06182 short chain dehydrogenase; Validated
Probab=96.11 E-value=0.0083 Score=61.28 Aligned_cols=40 Identities=28% Similarity=0.310 Sum_probs=36.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRK 492 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 492 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ |+.++++++.+
T Consensus 4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~ 45 (273)
T PRK06182 4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS 45 (273)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 57999999999999999999999999998 88888877654
No 100
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.0097 Score=59.78 Aligned_cols=42 Identities=19% Similarity=0.257 Sum_probs=37.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 8 k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (253)
T PRK06172 8 KVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALI 51 (253)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 68999999999999999999999999988 8888877776664
No 101
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.08 E-value=0.0095 Score=60.88 Aligned_cols=42 Identities=19% Similarity=0.235 Sum_probs=38.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||+|.||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 54 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEI 54 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 67999999999999999999999999998 8888888877765
No 102
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.0098 Score=59.66 Aligned_cols=41 Identities=22% Similarity=0.349 Sum_probs=35.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+.|+|+||||.||+++++.|+++|.+|+. |+.++.+++++.
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 45 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAE 45 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 46899999999999999999999999988 777777666554
No 103
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.01 Score=60.35 Aligned_cols=42 Identities=24% Similarity=0.353 Sum_probs=37.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 11 ~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 54 (263)
T PRK07814 11 QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQI 54 (263)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 67999999999999999999999999988 8888888777665
No 104
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.01 Score=59.22 Aligned_cols=42 Identities=26% Similarity=0.395 Sum_probs=37.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|.++|.+|.+ |+++..+++++++
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~ 50 (250)
T PRK07774 7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQI 50 (250)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 67999999999999999999999999998 7777777776665
No 105
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.011 Score=58.94 Aligned_cols=42 Identities=24% Similarity=0.260 Sum_probs=37.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 8 ~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (250)
T PRK12939 8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAAL 51 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 68999999999999999999999999888 8888777776664
No 106
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.01 Score=60.51 Aligned_cols=42 Identities=24% Similarity=0.386 Sum_probs=36.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
++|+++||||.||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 44 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLL 44 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 36899999999999999999999999988 8888887766654
No 107
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.01 Score=59.68 Aligned_cols=42 Identities=14% Similarity=0.236 Sum_probs=37.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||||.||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~ 46 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL 46 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 46899999999999999999999999988 8888888887765
No 108
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.04 E-value=0.01 Score=59.54 Aligned_cols=42 Identities=24% Similarity=0.397 Sum_probs=37.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 8 ~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (262)
T PRK13394 8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEI 51 (262)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Confidence 67999999999999999999999999988 8888887777665
No 109
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.009 Score=60.88 Aligned_cols=42 Identities=19% Similarity=0.301 Sum_probs=36.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhc-CcEEEe--cChhH-HHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQK-GIQVVT--LREDE-HEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~-~~~v~l--~~~~~-~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|+++ |.+|.+ |+.++ ++++.+++
T Consensus 9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l 54 (253)
T PRK07904 9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQM 54 (253)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHH
Confidence 57999999999999999999999 489988 87775 77776665
No 110
>PRK05717 oxidoreductase; Validated
Probab=96.03 E-value=0.011 Score=59.71 Aligned_cols=42 Identities=29% Similarity=0.370 Sum_probs=37.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~ 54 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL 54 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc
Confidence 68999999999999999999999999988 7777777776665
No 111
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.02 E-value=0.011 Score=59.04 Aligned_cols=42 Identities=19% Similarity=0.194 Sum_probs=35.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 47 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAV 47 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 57899999999999999999999999876 6667777666554
No 112
>PRK09242 tropinone reductase; Provisional
Probab=96.01 E-value=0.011 Score=59.62 Aligned_cols=42 Identities=21% Similarity=0.290 Sum_probs=38.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||+|.||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 10 k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l 53 (257)
T PRK09242 10 QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDEL 53 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 68999999999999999999999999988 8888888887775
No 113
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.011 Score=59.38 Aligned_cols=42 Identities=21% Similarity=0.295 Sum_probs=38.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
++|+++||+|.||+++|+.|+++|.+|++ |++++.+++++++
T Consensus 12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~ 55 (264)
T PRK12829 12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARL 55 (264)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 78999999999999999999999999988 8888888887765
No 114
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=96.00 E-value=0.011 Score=59.92 Aligned_cols=41 Identities=20% Similarity=0.280 Sum_probs=37.2
Q ss_pred EEEEeccCccHHHHHHHHHhh----cCcEEEe--cChhHHHHHHHHh
Q 006722 454 QVVLRGALTKVAYAIAFALCQ----KGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~----~~~~v~l--~~~~~~~~l~~~l 494 (633)
.|+++||+|+||+++|+.|++ +|.+|.+ |++++.+++++++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l 48 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI 48 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence 588999999999999999997 6999888 9999999888876
No 115
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.99 E-value=0.012 Score=58.58 Aligned_cols=42 Identities=21% Similarity=0.323 Sum_probs=36.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (251)
T PRK12826 7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELV 50 (251)
T ss_pred CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57999999999999999999999999988 8877776666554
No 116
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.011 Score=60.19 Aligned_cols=42 Identities=14% Similarity=0.209 Sum_probs=37.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (276)
T PRK05875 8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEI 51 (276)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 68999999999999999999999999998 8888877776665
No 117
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.98 E-value=0.1 Score=55.79 Aligned_cols=136 Identities=18% Similarity=0.188 Sum_probs=81.4
Q ss_pred cCCcEEEecccccccccccCCceEEeeCCC--CcceeecCChhHH-------HHHHhcC-CCCccEEEEeccCccHHHHH
Q 006722 399 KGAKVISLGLMNQGEELNRYGGVFVHKHPQ--LKMKVVDGSSLAV-------AVVINSI-PKGTTQVVLRGALTKVAYAI 468 (633)
Q Consensus 399 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~--L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatgkig~av 468 (633)
.|+|+++---=|....+-.--++.+.-+++ .-+.+.||+.+|+ |++.+-+ +++.++|.++| +|..|+.+
T Consensus 62 ~g~K~~~~~p~N~~~glp~~~g~v~l~d~~tG~p~ai~d~~~lT~~RTaa~sala~~~La~~~~~~v~iiG-~G~~a~~~ 140 (314)
T PRK06141 62 IGVKAVTVFPGNPARGLPGLHSTYLLFDGRTGEPLALVDGTELTARRTAAASALAASYLARKDASRLLVVG-TGRLASLL 140 (314)
T ss_pred eEEEEEeecCCCCcCCCCceEEEEEEEECCCCCEEEEEcCcchhcchhHHHHHHHHHHhCCCCCceEEEEC-CcHHHHHH
Confidence 588888743222212221111333444332 3489999999974 2333333 56889999999 59999999
Q ss_pred HHHHhh-c-CcEEEe--cChhHHHHHHHHhCCc---ccc-chhhhcccCcceEEEE--cCc---CCHHHHhhCCCCceee
Q 006722 469 AFALCQ-K-GIQVVT--LREDEHEKLRKSFGAK---SEC-NNLLLSRSYSQKIWLV--GKG---LTEEEQSKAKKGTIFI 535 (633)
Q Consensus 469 a~~L~~-~-~~~v~l--~~~~~~~~l~~~l~~~---~~~-~~l~~~~~~~~~vw~v--g~~---~~~~~q~~a~~G~~f~ 535 (633)
+++++. + ..+|.+ |++++.+++.++++.. -.. ..+.++.. ++||++. ... ++. .++++|+++.
T Consensus 141 ~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~-~aDIVi~aT~s~~pvl~~---~~l~~g~~i~ 216 (314)
T PRK06141 141 ALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVR-QADIISCATLSTEPLVRG---EWLKPGTHLD 216 (314)
T ss_pred HHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHh-cCCEEEEeeCCCCCEecH---HHcCCCCEEE
Confidence 998886 4 466777 9999999999987211 111 22222221 4555422 111 233 3589999776
Q ss_pred cccc
Q 006722 536 PFSQ 539 (633)
Q Consensus 536 ~~~~ 539 (633)
.+..
T Consensus 217 ~ig~ 220 (314)
T PRK06141 217 LVGN 220 (314)
T ss_pred eeCC
Confidence 5553
No 118
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.012 Score=57.94 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=34.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+.|+++||||.||+++|+.|+++|.+|++ |++++.++..++
T Consensus 8 k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~ 50 (239)
T PRK12828 8 KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPG 50 (239)
T ss_pred CEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHH
Confidence 57999999999999999999999999888 777665544444
No 119
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.012 Score=59.55 Aligned_cols=42 Identities=24% Similarity=0.294 Sum_probs=38.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++|++|+||+++|+.|+++|.+|.+ |++++.+++++++
T Consensus 8 k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (259)
T PRK06125 8 KRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADL 51 (259)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 68999999999999999999999999988 8888888877765
No 120
>PRK05693 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.01 Score=60.59 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=36.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+.|+++||+|.||+++|+.|+++|.+|++ |+.++.+.++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 44 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA 44 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC
Confidence 46899999999999999999999999988 888888777653
No 121
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.97 E-value=0.012 Score=59.38 Aligned_cols=42 Identities=12% Similarity=0.280 Sum_probs=36.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~ 46 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEI 46 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 47999999999999999999999999988 8887777776654
No 122
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.95 E-value=0.011 Score=59.72 Aligned_cols=42 Identities=17% Similarity=0.296 Sum_probs=35.0
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
-+.|+++||+|.||+++|+.|+++|.+|.+ |+ ++.+++++++
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~ 58 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLI 58 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHH
Confidence 378999999999999999999999999988 55 5556665554
No 123
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.94 E-value=0.013 Score=58.16 Aligned_cols=42 Identities=24% Similarity=0.479 Sum_probs=37.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL 49 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 58999999999999999999999999998 8888888776654
No 124
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.013 Score=59.91 Aligned_cols=42 Identities=19% Similarity=0.313 Sum_probs=37.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|.++|.+|.+ |+.++.+++++++
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 47 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQA 47 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999999999999999999999988 8888888776654
No 125
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.90 E-value=0.013 Score=58.57 Aligned_cols=42 Identities=21% Similarity=0.341 Sum_probs=36.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
++|+++|++|.||+++++.|+++|.+|++ |+.++.+++.+++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l 44 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEI 44 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 47899999999999999999999999988 8877777776665
No 126
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.014 Score=58.61 Aligned_cols=42 Identities=19% Similarity=0.284 Sum_probs=36.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~ 51 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREI 51 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 68999999999999999999999999865 7777777666554
No 127
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.89 E-value=0.014 Score=58.83 Aligned_cols=38 Identities=21% Similarity=0.258 Sum_probs=35.9
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLR 491 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~ 491 (633)
.|+|+||||+||+++|+.|.++|.+|.. |+.++...+.
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~ 41 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA 41 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence 6899999999999999999999999998 9999999887
No 128
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.89 E-value=0.014 Score=57.91 Aligned_cols=42 Identities=24% Similarity=0.248 Sum_probs=37.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||||.||+++|+.|+++|..|.+ |+.++.+++.+++
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~ 50 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL 50 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 58999999999999999999999999887 7888888877665
No 129
>PLN02253 xanthoxin dehydrogenase
Probab=95.87 E-value=0.013 Score=59.87 Aligned_cols=42 Identities=19% Similarity=0.315 Sum_probs=37.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |+.+..+++.+++
T Consensus 19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~ 62 (280)
T PLN02253 19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL 62 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Confidence 67999999999999999999999999988 7777777777776
No 130
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.85 E-value=0.014 Score=58.60 Aligned_cols=42 Identities=17% Similarity=0.284 Sum_probs=37.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++|++|.||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 13 k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l 56 (247)
T PRK08945 13 RIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEI 56 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Confidence 68999999999999999999999999988 8888877776665
No 131
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.014 Score=59.84 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=38.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|.++|.+|.+ |+.++.+++++++
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 47 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY 47 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc
Confidence 57999999999999999999999999988 8888888887765
No 132
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.84 E-value=0.015 Score=57.90 Aligned_cols=42 Identities=21% Similarity=0.355 Sum_probs=37.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+|+|++|.||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~ 51 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV 51 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57999999999999999999999999988 8888877776665
No 133
>PRK08177 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.011 Score=58.57 Aligned_cols=39 Identities=18% Similarity=0.267 Sum_probs=34.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLR 491 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~ 491 (633)
+.|+++||+|+||+++|+.|+++|.+|++ |+.++.++++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 42 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ 42 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH
Confidence 47999999999999999999999999998 7777666554
No 134
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.015 Score=58.09 Aligned_cols=42 Identities=19% Similarity=0.299 Sum_probs=37.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||+|.||+++|+.|.++|.+|++ |+.++.+...+++
T Consensus 6 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 49 (252)
T PRK06138 6 RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAI 49 (252)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHH
Confidence 57999999999999999999999999988 8888877777665
No 135
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.83 E-value=0.015 Score=57.38 Aligned_cols=42 Identities=29% Similarity=0.411 Sum_probs=36.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+.+|+.|.++|.+|.+ |++++.+.+..++
T Consensus 6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 49 (246)
T PRK05653 6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAEL 49 (246)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Confidence 57999999999999999999999999888 8888877666554
No 136
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.83 E-value=0.026 Score=59.72 Aligned_cols=139 Identities=22% Similarity=0.267 Sum_probs=88.0
Q ss_pred eecCChhHHHHHHhcCCCCc--cEEEEeccCccHHHHHHHHHhhcCc-EEEe--cChhHHHHHHHHhCCccc--c-chhh
Q 006722 433 VVDGSSLAVAVVINSIPKGT--TQVVLRGALTKVAYAIAFALCQKGI-QVVT--LREDEHEKLRKSFGAKSE--C-NNLL 504 (633)
Q Consensus 433 vv~Gnsltaavv~~~i~~~~--~~V~~~Gatgkig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~l~~~~~--~-~~l~ 504 (633)
=|||-.+.-+-.-+.++.+. ++|++.||. +.+|||+.+|.+.|+ ++++ |+.+|.++|++.++.... . ....
T Consensus 105 NTD~~G~~~~L~~~~~~~~~~~~~vlilGAG-GAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~ 183 (283)
T COG0169 105 NTDGIGFLRALKEFGLPVDVTGKRVLILGAG-GAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALA 183 (283)
T ss_pred cCCHHHHHHHHHhcCCCcccCCCEEEEECCc-HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccc
Confidence 37887777766666666664 889999985 568999999999995 6777 999999999999732211 0 0111
Q ss_pred hcccC-cceEE-------EEc---C-cCCHHHHhhCCCCceeecccccCCCcc---cCC-CCceeecCcccccCCccccc
Q 006722 505 LSRSY-SQKIW-------LVG---K-GLTEEEQSKAKKGTIFIPFSQFPPNDK---KIR-KDCMYHLTPAMAVPAAFENV 568 (633)
Q Consensus 505 ~~~~~-~~~vw-------~vg---~-~~~~~~q~~a~~G~~f~~~~~~~~~~~---~~R-~dc~y~~~~a~~~p~~~~~~ 568 (633)
+.... +.++. ..| + .++++ -+++++++.|+.=.|.+.. +.| +=|.+.++..|-+- |..
T Consensus 184 ~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~---~l~~~~~v~D~vY~P~~TplL~~A~~~G~~~idGl~Mlv~---Qaa 257 (283)
T COG0169 184 DLEGLEEADLLINATPVGMAGPEGDSPVPAE---LLPKGAIVYDVVYNPLETPLLREARAQGAKTIDGLGMLVH---QAA 257 (283)
T ss_pred ccccccccCEEEECCCCCCCCCCCCCCCcHH---hcCcCCEEEEeccCCCCCHHHHHHHHcCCeEECcHHHHHH---HHH
Confidence 11100 23443 111 1 23322 4889999999986665432 222 56778888888775 444
Q ss_pred cccccCCCcc
Q 006722 569 DSCENWLPRR 578 (633)
Q Consensus 569 ~~~e~~~p~~ 578 (633)
.++|.|.+.+
T Consensus 258 ~aF~lwtg~~ 267 (283)
T COG0169 258 EAFELWTGVE 267 (283)
T ss_pred HHHHHHhCCC
Confidence 4666666543
No 137
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.82 E-value=0.017 Score=58.76 Aligned_cols=46 Identities=20% Similarity=0.283 Sum_probs=39.6
Q ss_pred CCCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 449 PKGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 449 ~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+...+.++++||+|.||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~ 54 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAY 54 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 334478999999999999999999999999988 8888887777665
No 138
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.82 E-value=0.016 Score=57.83 Aligned_cols=42 Identities=17% Similarity=0.283 Sum_probs=37.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||+|.||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 4 ~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 47 (250)
T TIGR03206 4 KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI 47 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHH
Confidence 57899999999999999999999999988 8888877776664
No 139
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.013 Score=61.90 Aligned_cols=42 Identities=19% Similarity=0.185 Sum_probs=35.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cC----------hhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LR----------EDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~----------~~~~~~l~~~l 494 (633)
+.|+++||+++||+++|+.|+++|.+|++ |+ +++.+++.+++
T Consensus 9 k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l 62 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELV 62 (305)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHH
Confidence 68899999999999999999999999988 65 35666666554
No 140
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.77 E-value=0.016 Score=58.49 Aligned_cols=42 Identities=19% Similarity=0.335 Sum_probs=37.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.++.+ |++++.+++.+++
T Consensus 12 k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l 55 (255)
T PRK06113 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI 55 (255)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 78999999999999999999999999988 7888877776664
No 141
>PRK09135 pteridine reductase; Provisional
Probab=95.77 E-value=0.017 Score=57.37 Aligned_cols=42 Identities=21% Similarity=0.314 Sum_probs=35.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--c-ChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--L-REDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+.+|+.|+++|.+|.+ | ++++.+.+++++
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL 51 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 67999999999999999999999999988 4 455666665544
No 142
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.73 E-value=0.017 Score=57.61 Aligned_cols=42 Identities=31% Similarity=0.421 Sum_probs=36.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
+.++++||+|.||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~ 50 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL 50 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Confidence 57999999999999999999999999976 4667777776665
No 143
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.015 Score=57.45 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=35.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRK 492 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 492 (633)
+.|+|+|++|.||+++|+.|+++|.+|.+ |+.++.+++++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~ 43 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA 43 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence 46899999999999999999999999988 88777777654
No 144
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.017 Score=58.03 Aligned_cols=42 Identities=26% Similarity=0.289 Sum_probs=35.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
+.++++||+|.||+++|+.|+++|.+|.+ +++++.+++..++
T Consensus 5 k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 49 (252)
T PRK12747 5 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI 49 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence 57899999999999999999999999987 4567666665554
No 145
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.017 Score=58.44 Aligned_cols=42 Identities=19% Similarity=0.217 Sum_probs=36.2
Q ss_pred cEEEEeccCc-cHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALT-KVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatg-kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+| +||+++|+.|+++|.+|++ |+.+++++..+++
T Consensus 18 k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~ 62 (262)
T PRK07831 18 KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADEL 62 (262)
T ss_pred CEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 6899999996 8999999999999999998 7777777666554
No 146
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=95.71 E-value=0.014 Score=62.21 Aligned_cols=42 Identities=19% Similarity=0.255 Sum_probs=39.0
Q ss_pred cEEEEecc--CccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHh
Q 006722 453 TQVVLRGA--LTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Ga--tgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l 494 (633)
+.++++|| +++||+|+|+.|+++|-+|.+ |+.+++++++.++
T Consensus 10 k~alITGa~~s~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~~~~~ 54 (303)
T PLN02730 10 KRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSL 54 (303)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeCcchhhHHHHhh
Confidence 78999999 799999999999999999999 9999999888776
No 147
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.70 E-value=0.018 Score=56.76 Aligned_cols=42 Identities=29% Similarity=0.401 Sum_probs=34.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
++|+++||||.||+++|+.|+++|.+|++ ++.++.+.+.+++
T Consensus 7 ~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 51 (249)
T PRK12825 7 RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAV 51 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHH
Confidence 58999999999999999999999999776 4555555555543
No 148
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=95.69 E-value=0.017 Score=58.85 Aligned_cols=42 Identities=29% Similarity=0.389 Sum_probs=36.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
..|+++||+|+||+++|+.|+++|.+|.+ +++++++.+.+++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l 46 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAEL 46 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHH
Confidence 46899999999999999999999999988 4567887777766
No 149
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.69 E-value=0.12 Score=55.02 Aligned_cols=141 Identities=13% Similarity=0.118 Sum_probs=85.6
Q ss_pred cCCcEEEecccccccccccCCceEEeeCCC--CcceeecCChhHH-------HHHHhcC-CCCccEEEEeccCccHHHHH
Q 006722 399 KGAKVISLGLMNQGEELNRYGGVFVHKHPQ--LKMKVVDGSSLAV-------AVVINSI-PKGTTQVVLRGALTKVAYAI 468 (633)
Q Consensus 399 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~--L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatgkig~av 468 (633)
.|+|+++.--=|..+.|..--++.+--++. .-..+.||+.+|+ |++.+-+ +++.++|.++|+ |..|++.
T Consensus 62 ~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaA~sala~~~La~~~~~~v~IiGa-G~qa~~~ 140 (304)
T PRK07340 62 AITKLVTVCPGNAARGLPTIQGEVVVADAATGERLFLLDGPTVTGRRTAAVSLLAARTLAPAPPGDLLLIGT-GVQARAH 140 (304)
T ss_pred cEEEEEEeCCCCccCCCCcceEEEEEEECCCCcEEEEEcChhHHHHHHHHHHHHHHHHhCCCCCCEEEEECC-cHHHHHH
Confidence 578887743223322332222344444333 3389999999985 4445555 568899999998 9999999
Q ss_pred HHHHhh-cC-cEEEe--cChhHHHHHHHHhCCcc-c--cchhhhcccCcceEEEE----cCcCCHHHHhhCCCCceeecc
Q 006722 469 AFALCQ-KG-IQVVT--LREDEHEKLRKSFGAKS-E--CNNLLLSRSYSQKIWLV----GKGLTEEEQSKAKKGTIFIPF 537 (633)
Q Consensus 469 a~~L~~-~~-~~v~l--~~~~~~~~l~~~l~~~~-~--~~~l~~~~~~~~~vw~v----g~~~~~~~q~~a~~G~~f~~~ 537 (633)
+++||. ++ .++.+ |++++.+++.++++... . ...+.++.. ++||++. .+.+=+ .+.+||+++..+
T Consensus 141 ~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~-~aDiVitaT~s~~Pl~~---~~~~~g~hi~~i 216 (304)
T PRK07340 141 LEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPE-AVDLVVTATTSRTPVYP---EAARAGRLVVAV 216 (304)
T ss_pred HHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhh-cCCEEEEccCCCCceeC---ccCCCCCEEEec
Confidence 999985 55 45666 99999999999873110 0 112222221 4555422 111111 247899999988
Q ss_pred cccCCCc
Q 006722 538 SQFPPND 544 (633)
Q Consensus 538 ~~~~~~~ 544 (633)
....|.+
T Consensus 217 Gs~~p~~ 223 (304)
T PRK07340 217 GAFTPDM 223 (304)
T ss_pred CCCCCCc
Confidence 7544443
No 150
>PRK12743 oxidoreductase; Provisional
Probab=95.66 E-value=0.019 Score=58.11 Aligned_cols=42 Identities=14% Similarity=0.224 Sum_probs=35.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ +++++.+++.+++
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~ 47 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEV 47 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH
Confidence 57999999999999999999999999977 5667776666654
No 151
>PRK06484 short chain dehydrogenase; Validated
Probab=95.66 E-value=0.016 Score=64.86 Aligned_cols=44 Identities=18% Similarity=0.306 Sum_probs=40.4
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
-+.++++||+|+||+++|+.|+++|.+|.+ |++++++++++++|
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 314 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG 314 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 378999999999999999999999999998 89999999988873
No 152
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.019 Score=58.65 Aligned_cols=43 Identities=19% Similarity=0.294 Sum_probs=37.5
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
-+.|+++||+|.||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 53 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQL 53 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 368999999999999999999999999988 8888877776654
No 153
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.019 Score=59.00 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=36.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+|+||+|.||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 11 ~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~ 54 (274)
T PRK07775 11 RPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKI 54 (274)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 68999999999999999999999999877 7788777766554
No 154
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.63 E-value=0.025 Score=59.59 Aligned_cols=38 Identities=18% Similarity=0.167 Sum_probs=32.9
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLR 491 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~ 491 (633)
+|+|+||||-||+.+++.|.++|.+|.. |+.++.+.++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~ 41 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK 41 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh
Confidence 6999999999999999999999999887 7776655544
No 155
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.62 E-value=0.019 Score=60.19 Aligned_cols=42 Identities=24% Similarity=0.372 Sum_probs=39.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++|++++||+|+|+.|++.|-+|.+ |++++.++.++++
T Consensus 9 kvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~ 52 (270)
T KOG0725|consen 9 KVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQEL 52 (270)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 67899999999999999999999999999 9999998888775
No 156
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.02 Score=57.90 Aligned_cols=42 Identities=26% Similarity=0.380 Sum_probs=36.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+|+||+|.||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l 45 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQEL 45 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999999999999999999999998 8877777666654
No 157
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.60 E-value=0.046 Score=59.79 Aligned_cols=89 Identities=15% Similarity=0.191 Sum_probs=65.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccc----c-chhhhcccCcceEEEE-----cC--
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSE----C-NNLLLSRSYSQKIWLV-----GK-- 518 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~----~-~~l~~~~~~~~~vw~v-----g~-- 518 (633)
++|+|+|+ |.+|+.+|+.|.+.|.+|++ |+.++.+.+++++|..-. . +.+.+..+ .+|+++- |+
T Consensus 168 ~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~-~aDvVI~a~~~~g~~~ 245 (370)
T TIGR00518 168 GDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVK-RADLLIGAVLIPGAKA 245 (370)
T ss_pred ceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHc-cCCEEEEccccCCCCC
Confidence 56899988 89999999999999999888 888999999888744211 1 23333332 4455432 32
Q ss_pred --cCCHHHHhhCCCCceeecccccCCCc
Q 006722 519 --GLTEEEQSKAKKGTIFIPFSQFPPND 544 (633)
Q Consensus 519 --~~~~~~q~~a~~G~~f~~~~~~~~~~ 544 (633)
.++.+.-+.+++|.+++|++ +++-.
T Consensus 246 p~lit~~~l~~mk~g~vIvDva-~d~GG 272 (370)
T TIGR00518 246 PKLVSNSLVAQMKPGAVIVDVA-IDQGG 272 (370)
T ss_pred CcCcCHHHHhcCCCCCEEEEEe-cCCCC
Confidence 26788888899999999999 77654
No 158
>PRK07060 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.022 Score=56.52 Aligned_cols=42 Identities=29% Similarity=0.387 Sum_probs=38.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||+|.||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 10 ~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 53 (245)
T PRK07060 10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET 53 (245)
T ss_pred CEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 68999999999999999999999999988 8888888887775
No 159
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.58 E-value=0.015 Score=64.65 Aligned_cols=214 Identities=12% Similarity=0.072 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceEEeeCCCCcceeecCChhHHHHHHhcCCC-----CccEEEEe
Q 006722 384 SINRLIEEAILEAEEKGAKVISLGLMNQGEELNRYGGVFVHKHPQLKMKVVDGSSLAVAVVINSIPK-----GTTQVVLR 458 (633)
Q Consensus 384 ~in~~i~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~L~irvv~Gnsltaavv~~~i~~-----~~~~V~~~ 458 (633)
-|=.+|-+|...|.+.|.-=--|. . +=.. .+.+.|.-.-+.++-.|..=.+.++++-..+ .-++|+|+
T Consensus 115 QIlgQVK~A~~~A~~~g~~g~~L~---~---lf~~-A~~~aKrVrteT~I~~~~vSv~~~Av~la~~~~~~l~~kkvlvi 187 (414)
T PRK13940 115 QILGQVKDSYTLSKKNHAIGKELD---R---VFQK-VFATAKRVRSETRIGHCPVSVAFSAITLAKRQLDNISSKNVLII 187 (414)
T ss_pred HHHHHHHHHHHHHHHcCCchHHHH---H---HHHH-HHHHHHHHHhccCCCCCCcCHHHHHHHHHHHHhcCccCCEEEEE
Confidence 344556888888888886322121 1 1111 4445553334466666666555566555543 22789999
Q ss_pred ccCccHHHHHHHHHhhcCc-EEEe--cChhHHHHHHHHhC-Ccccc-chhhhcccCcceEEEEcC-----cCCHHHHhhC
Q 006722 459 GALTKVAYAIAFALCQKGI-QVVT--LREDEHEKLRKSFG-AKSEC-NNLLLSRSYSQKIWLVGK-----GLTEEEQSKA 528 (633)
Q Consensus 459 Gatgkig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~l~-~~~~~-~~l~~~~~~~~~vw~vg~-----~~~~~~q~~a 528 (633)
|| |++|+++|.+|+++|+ ++++ |+.++-++|.+++| ..... +.+.+... ++|+++... .|+.++ .+
T Consensus 188 Ga-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~-~aDiVI~aT~a~~~vi~~~~-~~- 263 (414)
T PRK13940 188 GA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIK-KADIIIAAVNVLEYIVTCKY-VG- 263 (414)
T ss_pred cC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhc-cCCEEEECcCCCCeeECHHH-hC-
Confidence 99 9999999999999986 5666 99999999999984 21111 23322221 344442211 234443 21
Q ss_pred CCCceeecccccCCCcccCCCCceeecCcccccC--CccccccccccCCCcchhhhHhhhhhh----hhccCCCcc-ccC
Q 006722 529 KKGTIFIPFSQFPPNDKKIRKDCMYHLTPAMAVP--AAFENVDSCENWLPRRVMSAWRIGGIV----HALEGWNEH-ECG 601 (633)
Q Consensus 529 ~~G~~f~~~~~~~~~~~~~R~dc~y~~~~a~~~p--~~~~~~~~~e~~~p~~~~~Ac~a~~~v----~alEgw~~~-e~G 601 (633)
.+..+++|.+ +|+.. + ++| .+.+.+.+= ++++. .++-.+..|...+=.|+.|| ..++.|... .+.
T Consensus 264 ~~~~~~iDLa-vPRdi-d--p~v--~~l~~v~l~~iDdl~~--i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~~~~~~~ 335 (414)
T PRK13940 264 DKPRVFIDIS-IPQAL-D--PKL--GELEQNVYYCVDDINA--VIEDNKDKRKYESSKAQKIIVKSLEEYLEKEKAIISN 335 (414)
T ss_pred CCCeEEEEeC-CCCCC-C--ccc--cCcCCeEEEeHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 3467999999 88885 1 111 111111110 02221 23434556665555666664 567777655 555
Q ss_pred ccc----ccHHHHHHHHHh
Q 006722 602 YAI----SNIHNVWEAALR 616 (633)
Q Consensus 602 ~~i----~~i~~i~~aa~k 616 (633)
..| ++.++|-+..++
T Consensus 336 p~I~~lr~~~~~i~~~el~ 354 (414)
T PRK13940 336 SAIKELFQKADGLVDLSLE 354 (414)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 544 666666544444
No 160
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.55 E-value=0.022 Score=56.23 Aligned_cols=42 Identities=29% Similarity=0.308 Sum_probs=33.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cC-hhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LR-EDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~-~~~~~~l~~~l 494 (633)
+.|+++||||.||+++|+.|+++|.+|++ |+ .++.+++.+++
T Consensus 6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 50 (248)
T PRK05557 6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEI 50 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 57999999999999999999999999966 43 33455554443
No 161
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.023 Score=56.48 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=33.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.++++ +++++.+++.+++
T Consensus 6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 50 (245)
T PRK12937 6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEI 50 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHH
Confidence 67999999999999999999999999877 3444455555443
No 162
>PRK07069 short chain dehydrogenase; Validated
Probab=95.54 E-value=0.019 Score=57.30 Aligned_cols=40 Identities=18% Similarity=0.289 Sum_probs=35.3
Q ss_pred EEEeccCccHHHHHHHHHhhcCcEEEe--cC-hhHHHHHHHHh
Q 006722 455 VVLRGALTKVAYAIAFALCQKGIQVVT--LR-EDEHEKLRKSF 494 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~~v~l--~~-~~~~~~l~~~l 494 (633)
|+++||+|.||+++|+.|+++|.+|.+ |+ .++++.+++++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 44 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEI 44 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence 799999999999999999999999988 66 77777777665
No 163
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.54 E-value=0.14 Score=54.83 Aligned_cols=137 Identities=16% Similarity=0.124 Sum_probs=79.6
Q ss_pred cCCcEEEecccccccccccCCceEEeeCC--CCcceeecCChhHH-------HHHHhcC-CCCccEEEEeccCccHHHHH
Q 006722 399 KGAKVISLGLMNQGEELNRYGGVFVHKHP--QLKMKVVDGSSLAV-------AVVINSI-PKGTTQVVLRGALTKVAYAI 468 (633)
Q Consensus 399 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p--~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatgkig~av 468 (633)
.|+|+++-=-=|....+-.--++.+.-++ ..-+.+.||+.+|+ |++.+-+ +++.++|.++|+ |.+|++.
T Consensus 64 ~g~K~~~~~p~n~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaa~sala~~~la~~~~~~v~iiGa-G~~a~~~ 142 (325)
T PRK08618 64 LGLKIVSVVPENKKKGKPTIPGTVILSDFETGEVLAILDGTYLTQIRTGALSGVATKYLAREDAKTLCLIGT-GGQAKGQ 142 (325)
T ss_pred EEEEEEeecCCCcccCCCcceEEEEEEeCCCCceEEEEccchhhhhhHHHHHHHHHHHhcCCCCcEEEEECC-cHHHHHH
Confidence 57887764222221111111123333333 23488999999985 3334555 568889999985 6889999
Q ss_pred HHHHhh-cCc-EEEe--cChhHHHHHHHHhC----Cccc-cchhhhcccCcceEEEEcCcC-CHH-HHhhCCCCceeecc
Q 006722 469 AFALCQ-KGI-QVVT--LREDEHEKLRKSFG----AKSE-CNNLLLSRSYSQKIWLVGKGL-TEE-EQSKAKKGTIFIPF 537 (633)
Q Consensus 469 a~~L~~-~~~-~v~l--~~~~~~~~l~~~l~----~~~~-~~~l~~~~~~~~~vw~vg~~~-~~~-~q~~a~~G~~f~~~ 537 (633)
+.+|++ +++ +|.+ |++++.+++.+++. .... ..++.++.. ++|+++....- +|. + .++++|++++.+
T Consensus 143 ~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~aDiVi~aT~s~~p~i~-~~l~~G~hV~~i 220 (325)
T PRK08618 143 LEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIE-EADIIVTVTNAKTPVFS-EKLKKGVHINAV 220 (325)
T ss_pred HHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHh-cCCEEEEccCCCCcchH-HhcCCCcEEEec
Confidence 988874 454 4444 99999998888761 1101 122222221 55665432221 121 2 579999999877
Q ss_pred c
Q 006722 538 S 538 (633)
Q Consensus 538 ~ 538 (633)
-
T Consensus 221 G 221 (325)
T PRK08618 221 G 221 (325)
T ss_pred C
Confidence 4
No 164
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.53 E-value=0.019 Score=57.32 Aligned_cols=29 Identities=28% Similarity=0.409 Sum_probs=27.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+.|+++||+|+||+++|+.|+++|.+|.+
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G~~vi~ 34 (248)
T TIGR01832 6 KVALVTGANTGLGQGIAVGLAEAGADIVG 34 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEE
Confidence 68999999999999999999999999998
No 165
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.53 E-value=0.021 Score=58.32 Aligned_cols=42 Identities=26% Similarity=0.373 Sum_probs=36.3
Q ss_pred cEEEEeccC--ccHHHHHHHHHhhcCcEEEe--c---ChhHHHHHHHHh
Q 006722 453 TQVVLRGAL--TKVAYAIAFALCQKGIQVVT--L---REDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gat--gkig~ava~~L~~~~~~v~l--~---~~~~~~~l~~~l 494 (633)
+.++++||+ ++||+++|+.|+++|.+|.+ | ++++++++++++
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~ 56 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL 56 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc
Confidence 678999998 89999999999999999998 3 346788888876
No 166
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.51 E-value=0.027 Score=59.02 Aligned_cols=38 Identities=24% Similarity=0.175 Sum_probs=32.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKL 490 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l 490 (633)
+.|+|+||||.||+++++.|.++|.+|.. |+.++.+++
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 45 (322)
T PLN02986 6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKT 45 (322)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHH
Confidence 68999999999999999999999999975 766554443
No 167
>PRK07985 oxidoreductase; Provisional
Probab=95.50 E-value=0.021 Score=59.59 Aligned_cols=41 Identities=22% Similarity=0.416 Sum_probs=33.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--c--ChhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--L--REDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~--~~~~~~~l~~~ 493 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ | ++++.+++++.
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~ 94 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKI 94 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHH
Confidence 68999999999999999999999999988 3 23455555544
No 168
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.48 E-value=0.052 Score=57.64 Aligned_cols=165 Identities=22% Similarity=0.281 Sum_probs=102.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKVIS--LG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn 437 (633)
+.+-+.-+..-.+.|++.|++..- |. +++.++++|.|- ++.++.= | +++ .+=|||=
T Consensus 43 ~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl 122 (286)
T PRK14175 43 DGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGF 122 (286)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence 334455556667789999998654 43 344447888874 4555431 1 232 1224443
Q ss_pred h----------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 438 S----------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 438 s----------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+ -|++.|++-+.. .-++|+|+|++.=+|+.+|..|.++|..|++ ++..
T Consensus 123 ~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~--------- 193 (286)
T PRK14175 123 HPINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK--------- 193 (286)
T ss_pred CccchHhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------
Confidence 2 366666665543 3389999999999999999999999999999 3221
Q ss_pred CCccccchhhhcc-cCcceEEEEcCc--CCHHHHhhCCCCceeecccccCCCc-ccCCCCceeec-----CcccccCCcc
Q 006722 495 GAKSECNNLLLSR-SYSQKIWLVGKG--LTEEEQSKAKKGTIFIPFSQFPPND-KKIRKDCMYHL-----TPAMAVPAAF 565 (633)
Q Consensus 495 ~~~~~~~~l~~~~-~~~~~vw~vg~~--~~~~~q~~a~~G~~f~~~~~~~~~~-~~~R~dc~y~~-----~~a~~~p~~~ 565 (633)
+|.+.+ ++|..|..+|+- ++++. .++|++++|+. +++.. .++--||-+.+ .....||+.+
T Consensus 194 -------~l~~~~~~ADIVIsAvg~p~~i~~~~---vk~gavVIDvG-i~~~~~gkl~GDvd~~~~~~~a~~iTPVPGGV 262 (286)
T PRK14175 194 -------DMASYLKDADVIVSAVGKPGLVTKDV---VKEGAVIIDVG-NTPDENGKLKGDVDYDAVKEIAGAITPVPGGV 262 (286)
T ss_pred -------hHHHHHhhCCEEEECCCCCcccCHHH---cCCCcEEEEcC-CCcCCCCCeecCccHHHHHhhccCcCCCCCCC
Confidence 223222 335555566665 77754 89999999999 77731 12446665332 2234466654
Q ss_pred c
Q 006722 566 E 566 (633)
Q Consensus 566 ~ 566 (633)
-
T Consensus 263 G 263 (286)
T PRK14175 263 G 263 (286)
T ss_pred H
Confidence 3
No 169
>PRK06720 hypothetical protein; Provisional
Probab=95.47 E-value=0.026 Score=55.01 Aligned_cols=42 Identities=12% Similarity=0.287 Sum_probs=36.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||+|+||+++|+.|+++|.+|.+ |+.++.++..+++
T Consensus 17 k~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l 60 (169)
T PRK06720 17 KVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI 60 (169)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 67899999999999999999999999988 7777766665554
No 170
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.46 E-value=0.022 Score=57.53 Aligned_cols=40 Identities=28% Similarity=0.409 Sum_probs=33.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRK 492 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~ 492 (633)
+.++++||+|.||+++|+.|+++|.+|.+ ++++..+++++
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~ 50 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE 50 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh
Confidence 67999999999999999999999999987 44555555554
No 171
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.021 Score=57.49 Aligned_cols=40 Identities=18% Similarity=0.331 Sum_probs=33.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+.++++||+|.||+++|+.|+++|.+|.+ |++++. ++.++
T Consensus 8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~ 49 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEE 49 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHH
Confidence 57999999999999999999999999888 766665 44343
No 172
>PRK08264 short chain dehydrogenase; Validated
Probab=95.42 E-value=0.018 Score=57.22 Aligned_cols=37 Identities=19% Similarity=0.225 Sum_probs=32.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCc-EEEe--cChhHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGI-QVVT--LREDEHEK 489 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~-~v~l--~~~~~~~~ 489 (633)
+.|+++||+|.||+++|+.|+++|. +|++ |+.++.++
T Consensus 7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~ 46 (238)
T PRK08264 7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD 46 (238)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh
Confidence 6799999999999999999999998 8888 77766543
No 173
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=95.41 E-value=0.056 Score=61.92 Aligned_cols=42 Identities=26% Similarity=0.363 Sum_probs=38.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
++|+++|| |++|+|+|..|.++|.+|.+ |+.++.+++.++++
T Consensus 380 k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~ 423 (529)
T PLN02520 380 KLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVG 423 (529)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence 78999999 89999999999999999888 88999999998873
No 174
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.023 Score=58.44 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=29.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LRED 485 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~ 485 (633)
+.++++||+|.||+++|+.|+++|.+|.+ |+.+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence 57999999999999999999999999988 5544
No 175
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.40 E-value=0.023 Score=57.63 Aligned_cols=29 Identities=21% Similarity=0.405 Sum_probs=27.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+.|+++||+|+||+++|+.|+++|.+|++
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~vv~ 37 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAGADIVG 37 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEE
Confidence 68999999999999999999999999998
No 176
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.40 E-value=0.027 Score=55.98 Aligned_cols=42 Identities=24% Similarity=0.328 Sum_probs=37.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++|++|.||+++|+.|+++|.+|++ |++++.+.+.+++
T Consensus 6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~ 49 (253)
T PRK08217 6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAEC 49 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57899999999999999999999999888 8888887776664
No 177
>PRK06123 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.027 Score=56.20 Aligned_cols=42 Identities=19% Similarity=0.306 Sum_probs=34.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
+.++++||+|.||+++|+.|+++|.+|.+ +++++.+.+.+++
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l 47 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAI 47 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999999988877 4556666555544
No 178
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=95.36 E-value=0.028 Score=56.95 Aligned_cols=42 Identities=24% Similarity=0.333 Sum_probs=34.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--c-ChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--L-REDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|++ | +++..+++.+++
T Consensus 8 k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l 52 (261)
T PRK08936 8 KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEI 52 (261)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 68999999999999999999999999887 4 445555555544
No 179
>PRK07806 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.028 Score=56.15 Aligned_cols=42 Identities=17% Similarity=0.222 Sum_probs=34.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cCh-hHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LRE-DEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|.++|.+|.+ |+. ++.+++.+++
T Consensus 7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l 51 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI 51 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHH
Confidence 67999999999999999999999999877 654 4556555554
No 180
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.027 Score=56.49 Aligned_cols=34 Identities=29% Similarity=0.336 Sum_probs=30.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDE 486 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~ 486 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ |+++.
T Consensus 16 k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~ 51 (255)
T PRK06841 16 KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV 51 (255)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 68999999999999999999999999998 66554
No 181
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.027 Score=56.84 Aligned_cols=42 Identities=26% Similarity=0.336 Sum_probs=34.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cCh-hHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LRE-DEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~l 494 (633)
+.++++|++|+||+++|+.|+++|.+|.+ |+. +.++++.+++
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l 53 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHI 53 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence 68999999999999999999999999998 543 3455555544
No 182
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.30 E-value=0.028 Score=56.69 Aligned_cols=41 Identities=22% Similarity=0.302 Sum_probs=33.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |++ ..+++.+++
T Consensus 9 k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~ 51 (260)
T PRK12823 9 KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAEL 51 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHH
Confidence 67999999999999999999999999988 553 344555544
No 183
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.30 E-value=0.084 Score=52.89 Aligned_cols=82 Identities=18% Similarity=0.294 Sum_probs=58.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEE---EEcCcCCHHHHhh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIW---LVGKGLTEEEQSK 527 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw---~vg~~~~~~~q~~ 527 (633)
++|.+.|. |++|+++|+.|.+.|.+|+. ++.++.+++++++|..... . .+....++||. ..|..|+++.-.+
T Consensus 29 k~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~-~-~~l~~~~~Dv~vp~A~~~~I~~~~~~~ 105 (200)
T cd01075 29 KTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVA-P-EEIYSVDADVFAPCALGGVINDDTIPQ 105 (200)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEc-c-hhhccccCCEEEecccccccCHHHHHH
Confidence 78999998 69999999999999999999 8888899998887432211 1 12222256664 4567888888777
Q ss_pred CCCCceeeccc
Q 006722 528 AKKGTIFIPFS 538 (633)
Q Consensus 528 a~~G~~f~~~~ 538 (633)
++.. .++.-+
T Consensus 106 l~~~-~v~~~A 115 (200)
T cd01075 106 LKAK-AIAGAA 115 (200)
T ss_pred cCCC-EEEECC
Confidence 7644 344444
No 184
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.29 E-value=0.075 Score=60.01 Aligned_cols=193 Identities=18% Similarity=0.142 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceEEeeCCCCcceeecCChhHHHHHHhcCCC--CccEEEEeccC
Q 006722 384 SINRLIEEAILEAEEKGAKVISLGLMNQGEELNRYGGVFVHKHPQLKMKVVDGSSLAVAVVINSIPK--GTTQVVLRGAL 461 (633)
Q Consensus 384 ~in~~i~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~L~irvv~Gnsltaavv~~~i~~--~~~~V~~~Gat 461 (633)
.++|+ +||.++.++|+-|+.--.-+.. .+ .+.++-+|-|.. -.+++.... .-++|.|+|.
T Consensus 201 Gv~rl--~~m~~~g~L~iPV~nv~d~~tk---------~~-----aD~~~G~~~s~~-d~~~R~~~~~LaGKtVgVIG~- 262 (476)
T PTZ00075 201 GVHRL--YKMLKKGELLFPAINVNDSVTK---------SK-----FDNIYGCRHSLI-DGIFRATDVMIAGKTVVVCGY- 262 (476)
T ss_pred HHHHH--HHHHHCCCCCceEEEeCCcchH---------HH-----HHHHHHHHHHHH-HHHHHhcCCCcCCCEEEEECC-
Confidence 45555 6777777888888764432221 00 112333333333 222233222 3389999995
Q ss_pred ccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEE--EEc--CcCCHHHHhhCCCCceee
Q 006722 462 TKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIW--LVG--KGLTEEEQSKAKKGTIFI 535 (633)
Q Consensus 462 gkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw--~vg--~~~~~~~q~~a~~G~~f~ 535 (633)
|.||+++|+.|...|.+|+. ++..+...... .|+.. ..+.+..+ .+|++ ..| ..++.+.-..+++|++++
T Consensus 263 G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-~G~~~--~~leell~-~ADIVI~atGt~~iI~~e~~~~MKpGAiLI 338 (476)
T PTZ00075 263 GDVGKGCAQALRGFGARVVVTEIDPICALQAAM-EGYQV--VTLEDVVE-TADIFVTATGNKDIITLEHMRRMKNNAIVG 338 (476)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-cCcee--ccHHHHHh-cCCEEEECCCcccccCHHHHhccCCCcEEE
Confidence 57999999999999999988 45444322222 23221 13333331 34453 334 367888888999999999
Q ss_pred cccccCCCc--ccCC--CCc--eee--cCcccccCC----------ccccccccccCCCcchhhhHhhhhhhhhccCCCc
Q 006722 536 PFSQFPPND--KKIR--KDC--MYH--LTPAMAVPA----------AFENVDSCENWLPRRVMSAWRIGGIVHALEGWNE 597 (633)
Q Consensus 536 ~~~~~~~~~--~~~R--~dc--~y~--~~~a~~~p~----------~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~ 597 (633)
.+++++.+. .+++ .|. .-. ......+|. .+-|+ .|-.+.|..+|+-.+|--.+-.+|=|.+
T Consensus 339 NvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~~i~llaeGrlvNl-~~~~GhP~~vMd~sfa~Q~la~~~l~~~ 417 (476)
T PTZ00075 339 NIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGKGIILLAEGRLVNL-GCATGHPSFVMSNSFTNQVLAQIELWEN 417 (476)
T ss_pred EcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCCEEEEEeCCCcccc-CCCCCCCeeEeeHHHHHHHHHHHHHHhc
Confidence 999976321 1122 111 100 111122332 36678 8889999999999888777777777665
Q ss_pred cc
Q 006722 598 HE 599 (633)
Q Consensus 598 ~e 599 (633)
+.
T Consensus 418 ~~ 419 (476)
T PTZ00075 418 RD 419 (476)
T ss_pred cC
Confidence 54
No 185
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.28 E-value=0.033 Score=57.96 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=30.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDE 486 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~ 486 (633)
++|+|+||||-||+.+++.|.++|.+|.. |+.++
T Consensus 5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 68999999999999999999999999876 66554
No 186
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=95.28 E-value=0.031 Score=55.47 Aligned_cols=42 Identities=17% Similarity=0.227 Sum_probs=34.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++++.|+++|.+|.+ |++++.+++.+++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 46 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLI 46 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH
Confidence 46899999999999999999999999865 6676666655553
No 187
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=95.28 E-value=0.031 Score=55.80 Aligned_cols=42 Identities=26% Similarity=0.409 Sum_probs=35.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
+.++++||+|.||+++|+.|+++|.+|++ |++++.+++.+++
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l 51 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNEL 51 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHH
Confidence 68999999999999999999999999987 4567766665554
No 188
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.24 E-value=0.031 Score=57.75 Aligned_cols=43 Identities=21% Similarity=0.288 Sum_probs=36.2
Q ss_pred cEEEEeccC--ccHHHHHHHHHhhcCcEEEe--cC---hhHHHHHHHHhC
Q 006722 453 TQVVLRGAL--TKVAYAIAFALCQKGIQVVT--LR---EDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gat--gkig~ava~~L~~~~~~v~l--~~---~~~~~~l~~~l~ 495 (633)
+.|+++||+ ++||+++|+.|+++|.+|.+ |+ +++.+++++++|
T Consensus 11 k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~ 60 (272)
T PRK08159 11 KRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG 60 (272)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC
Confidence 678999997 79999999999999999988 54 366777777764
No 189
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.22 E-value=0.032 Score=55.93 Aligned_cols=41 Identities=17% Similarity=0.283 Sum_probs=32.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cC-hhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LR-EDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~-~~~~~~l~~~ 493 (633)
+.|+++||+|.||+++|+.|+++|.+|++ |+ ++..+++.++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~ 46 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQE 46 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Confidence 46899999999999999999999999888 43 3444444333
No 190
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.21 E-value=0.031 Score=55.67 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=30.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDE 486 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~ 486 (633)
+.|+++||+|+||+++|+.|+++|.+|++ |++++
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP 38 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 57899999999999999999999999988 66554
No 191
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.21 E-value=0.085 Score=55.89 Aligned_cols=119 Identities=15% Similarity=0.190 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHcCCcEEEecccccccccccCCceEEeeCCCCcceeecCChhHHHHHHhcC-----CCCccEEEEeccCc
Q 006722 388 LIEEAILEAEEKGAKVISLGLMNQGEELNRYGGVFVHKHPQLKMKVVDGSSLAVAVVINSI-----PKGTTQVVLRGALT 462 (633)
Q Consensus 388 ~i~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~L~irvv~Gnsltaavv~~~i-----~~~~~~V~~~Gatg 462 (633)
.+.+++..|.. .|++|. +| +|.++..+ .+-..= |...+++.+ +-.-++|+++|++|
T Consensus 109 ~~ld~I~~aKD-------Vdg~n~---~n-~G~l~~~~--~~~~p~------T~~gii~~L~~~~i~l~Gk~vvViG~gg 169 (283)
T PRK14192 109 ACFDAISLAKD-------VDGVTC---LG-FGRMAMGE--AAYGSA------TPAGIMRLLKAYNIELAGKHAVVVGRSA 169 (283)
T ss_pred HHHhccCHHHh-------cCCCCc---cc-cCccccCC--CcccCC------cHHHHHHHHHHcCCCCCCCEEEEECCcH
Confidence 34666644444 356777 56 56666543 222222 224444433 33448999999999
Q ss_pred cHHHHHHHHHhhcCcEEEecChhHHHHHHHHhCCccccchhhhcccCcceEEEEc--CcCCHHHHhhCCCCceeeccccc
Q 006722 463 KVAYAIAFALCQKGIQVVTLREDEHEKLRKSFGAKSECNNLLLSRSYSQKIWLVG--KGLTEEEQSKAKKGTIFIPFSQF 540 (633)
Q Consensus 463 kig~ava~~L~~~~~~v~l~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw~vg--~~~~~~~q~~a~~G~~f~~~~~~ 540 (633)
-+|+++|..|.++|..|++-++ +-++|++.+ ..+|..|-.+| +.++++. +++|++++|+. .
T Consensus 170 ~vGkpia~~L~~~gatVtv~~~-~t~~L~~~~------------~~aDIvI~AtG~~~~v~~~~---lk~gavViDvg-~ 232 (283)
T PRK14192 170 ILGKPMAMMLLNANATVTICHS-RTQNLPELV------------KQADIIVGAVGKPELIKKDW---IKQGAVVVDAG-F 232 (283)
T ss_pred HHHHHHHHHHHhCCCEEEEEeC-CchhHHHHh------------ccCCEEEEccCCCCcCCHHH---cCCCCEEEEEE-E
Confidence 9999999999999999998111 222333332 11122222332 2455544 99999999998 5
Q ss_pred CC
Q 006722 541 PP 542 (633)
Q Consensus 541 ~~ 542 (633)
.|
T Consensus 233 n~ 234 (283)
T PRK14192 233 HP 234 (283)
T ss_pred ee
Confidence 55
No 192
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.20 E-value=0.033 Score=57.76 Aligned_cols=43 Identities=26% Similarity=0.437 Sum_probs=35.8
Q ss_pred cEEEEeccC--ccHHHHHHHHHhhcCcEEEe--cCh---hHHHHHHHHhC
Q 006722 453 TQVVLRGAL--TKVAYAIAFALCQKGIQVVT--LRE---DEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gat--gkig~ava~~L~~~~~~v~l--~~~---~~~~~l~~~l~ 495 (633)
+.|+++||+ ++||+|+|+.|+++|.+|.+ |++ ++.+++.+++|
T Consensus 6 k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~ 55 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG 55 (274)
T ss_pred cEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC
Confidence 678999997 79999999999999999998 663 56677766653
No 193
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.19 E-value=0.042 Score=54.95 Aligned_cols=39 Identities=21% Similarity=0.300 Sum_probs=32.8
Q ss_pred EEEeccCccHHHHHHHHHhhcCcEEEe--cC--hhHHHHHHHH
Q 006722 455 VVLRGALTKVAYAIAFALCQKGIQVVT--LR--EDEHEKLRKS 493 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~~v~l--~~--~~~~~~l~~~ 493 (633)
|+|+||||++|+.|+++|.+++.+|.. |+ +++.++|++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~ 43 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL 43 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc
Confidence 789999999999999999999888887 65 3556777664
No 194
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.02 Score=58.13 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=30.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEH 487 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~ 487 (633)
+.|+++||||.||+++|+.|+++|.+|++ |+.++.
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~ 41 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA 41 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc
Confidence 46999999999999999999999999998 665554
No 195
>PRK09134 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.033 Score=56.27 Aligned_cols=42 Identities=29% Similarity=0.442 Sum_probs=34.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ ++.++.+.+.+++
T Consensus 10 k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 54 (258)
T PRK09134 10 RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEI 54 (258)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 68999999999999999999999999976 4556666665554
No 196
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=95.19 E-value=0.027 Score=55.98 Aligned_cols=40 Identities=23% Similarity=0.351 Sum_probs=32.5
Q ss_pred EEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 455 VVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
|+++||+|.||+++|+.|+++|.+|.+ +++++.+.+.+++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l 43 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAI 43 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 589999999999999999999999877 3455666665554
No 197
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.18 E-value=0.032 Score=56.64 Aligned_cols=40 Identities=23% Similarity=0.350 Sum_probs=32.3
Q ss_pred cEEEEeccC--ccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 453 TQVVLRGAL--TKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gat--gkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+.|+++||+ ++||+++|+.|+++|.+|.+ |+ ++.++..++
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~ 51 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQK 51 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHh
Confidence 678999999 79999999999999999998 66 344433333
No 198
>PRK07041 short chain dehydrogenase; Provisional
Probab=95.18 E-value=0.025 Score=55.90 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=35.0
Q ss_pred EEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 456 VLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 456 ~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+++||+|.||+++|+.|+++|.+|++ |+.++.+.+.+++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~ 41 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARAL 41 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 47999999999999999999999988 8888888877765
No 199
>PRK06484 short chain dehydrogenase; Validated
Probab=95.16 E-value=0.03 Score=62.81 Aligned_cols=43 Identities=23% Similarity=0.280 Sum_probs=40.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
+.|+|+||+++||+++|+.|.++|.+|.+ |+.++++++.+++|
T Consensus 6 k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (520)
T PRK06484 6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG 50 (520)
T ss_pred eEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 67899999999999999999999999988 99999999988874
No 200
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.14 E-value=0.032 Score=57.56 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=34.1
Q ss_pred cEEEEeccCc--cHHHHHHHHHhhcCcEEEe--cCh---hHHHHHHHHhC
Q 006722 453 TQVVLRGALT--KVAYAIAFALCQKGIQVVT--LRE---DEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatg--kig~ava~~L~~~~~~v~l--~~~---~~~~~l~~~l~ 495 (633)
+.++++||++ +||+|+|+.|+++|.+|.+ |++ ++.+++++++|
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g 57 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG 57 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC
Confidence 6789999996 9999999999999999998 554 34455555543
No 201
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.12 E-value=0.036 Score=54.87 Aligned_cols=42 Identities=26% Similarity=0.398 Sum_probs=35.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l 494 (633)
+.++++||||.||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 6 ~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 50 (247)
T PRK05565 6 KVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEI 50 (247)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 57999999999999999999999999877 6667766665554
No 202
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.031 Score=54.69 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=35.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+|+||+|.||+++|+.|+++ .+|.. |+.++.+++++++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~ 46 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL 46 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh
Confidence 57999999999999999999999 88888 8888887776653
No 203
>PRK06128 oxidoreductase; Provisional
Probab=95.07 E-value=0.035 Score=57.90 Aligned_cols=29 Identities=21% Similarity=0.397 Sum_probs=27.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+.|+++||+|+||+++|+.|+++|.+|++
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G~~V~i 84 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREGADIAL 84 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcCCEEEE
Confidence 68999999999999999999999999988
No 204
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.06 E-value=0.093 Score=50.06 Aligned_cols=72 Identities=18% Similarity=0.079 Sum_probs=50.3
Q ss_pred CCCccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhCCccccchhhhcc-cCcceEEEEcCc--CCHHH
Q 006722 449 PKGTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFGAKSECNNLLLSR-SYSQKIWLVGKG--LTEEE 524 (633)
Q Consensus 449 ~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~~~~~~~~l~~~~-~~~~~vw~vg~~--~~~~~ 524 (633)
+-.-++|.++|.+..+|+.+|..|.++|..|++ .++. .++.+.. ++|..|-.+|+- ++++
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t---------------~~l~~~v~~ADIVvsAtg~~~~i~~~- 88 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT---------------IQLQSKVHDADVVVVGSPKPEKVPTE- 88 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC---------------cCHHHHHhhCCEEEEecCCCCccCHH-
Confidence 334589999999999999999999999999999 2111 1222222 334444455543 4444
Q ss_pred HhhCCCCceeeccc
Q 006722 525 QSKAKKGTIFIPFS 538 (633)
Q Consensus 525 q~~a~~G~~f~~~~ 538 (633)
|+++|++++|+.
T Consensus 89 --~ikpGa~Vidvg 100 (140)
T cd05212 89 --WIKPGATVINCS 100 (140)
T ss_pred --HcCCCCEEEEcC
Confidence 599999999987
No 205
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.04 E-value=0.027 Score=57.19 Aligned_cols=38 Identities=24% Similarity=0.239 Sum_probs=33.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKL 490 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l 490 (633)
++|+++||||.||+++++.|.++|.+|+. |+.++.+++
T Consensus 18 ~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~ 57 (251)
T PLN00141 18 KTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTS 57 (251)
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHh
Confidence 78999999999999999999999999876 887775543
No 206
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.03 E-value=0.036 Score=56.50 Aligned_cols=42 Identities=19% Similarity=0.362 Sum_probs=35.8
Q ss_pred cEEEEecc--CccHHHHHHHHHhhcCcEEEe--cC--hhHHHHHHHHh
Q 006722 453 TQVVLRGA--LTKVAYAIAFALCQKGIQVVT--LR--EDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Ga--tgkig~ava~~L~~~~~~v~l--~~--~~~~~~l~~~l 494 (633)
+.|+++|| +++||+++|+.|+++|.+|.+ |+ ++..+++++++
T Consensus 8 k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~ 55 (256)
T PRK07889 8 KRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL 55 (256)
T ss_pred CEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc
Confidence 57899999 899999999999999999998 44 35577887776
No 207
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.02 E-value=0.037 Score=57.53 Aligned_cols=42 Identities=21% Similarity=0.300 Sum_probs=35.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cCh---------hHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LRE---------DEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~---------~~~~~l~~~l 494 (633)
+.++++||+|+||+++|+.|+++|.+|.+ ++. ++.+++.+++
T Consensus 7 k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l 59 (286)
T PRK07791 7 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEI 59 (286)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHH
Confidence 67899999999999999999999999988 554 6677776665
No 208
>PRK12827 short chain dehydrogenase; Provisional
Probab=95.00 E-value=0.041 Score=54.54 Aligned_cols=42 Identities=21% Similarity=0.342 Sum_probs=34.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe------cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT------LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l------~~~~~~~~l~~~l 494 (633)
+.++++||+|.||+++|+.|+++|.+|++ ++++..+++.+++
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 54 (249)
T PRK12827 7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGI 54 (249)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHH
Confidence 67999999999999999999999999877 3555556555554
No 209
>PRK05855 short chain dehydrogenase; Validated
Probab=94.99 E-value=0.035 Score=62.19 Aligned_cols=42 Identities=26% Similarity=0.394 Sum_probs=38.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
..++|+||+|+||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 316 ~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~ 359 (582)
T PRK05855 316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELI 359 (582)
T ss_pred CEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 67899999999999999999999999988 9988888877765
No 210
>PRK06198 short chain dehydrogenase; Provisional
Probab=94.98 E-value=0.038 Score=55.63 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=35.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcE-EEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQ-VVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~l 494 (633)
+.|+++||+|.||+++|+.|+++|.+ |.+ |+.++.+.+.+++
T Consensus 7 k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l 51 (260)
T PRK06198 7 KVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL 51 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHH
Confidence 67999999999999999999999998 777 7777666555443
No 211
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=94.96 E-value=0.041 Score=58.68 Aligned_cols=47 Identities=17% Similarity=0.104 Sum_probs=37.4
Q ss_pred cCCCCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 447 SIPKGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 447 ~i~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+......+|+|+||+|-||+++|+.|.++|.+|.. |+.++.+.+.++
T Consensus 5 ~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~ 53 (353)
T PLN02896 5 GRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSK 53 (353)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh
Confidence 34445578999999999999999999999999987 766655555444
No 212
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.029 Score=56.49 Aligned_cols=34 Identities=29% Similarity=0.345 Sum_probs=30.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDE 486 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~ 486 (633)
+.++++||+|+||+++|+.|+++|.+|++ |++++
T Consensus 7 k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~ 42 (252)
T PRK07856 7 RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE 42 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 68999999999999999999999999988 66554
No 213
>PRK06046 alanine dehydrogenase; Validated
Probab=94.94 E-value=0.34 Score=52.07 Aligned_cols=140 Identities=18% Similarity=0.226 Sum_probs=83.3
Q ss_pred HcCCcEEEecccccccccccCCceEEeeCCC--CcceeecCChhHH-------HHHHhcC-CCCccEEEEeccCccHHHH
Q 006722 398 EKGAKVISLGLMNQGEELNRYGGVFVHKHPQ--LKMKVVDGSSLAV-------AVVINSI-PKGTTQVVLRGALTKVAYA 467 (633)
Q Consensus 398 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~--L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatgkig~a 467 (633)
..|+|+++.--=|..+.+..--++.+.-++. .-..+.||+.+|+ |++.+-+ +++.+.|.++| +|..|++
T Consensus 65 ~~g~K~~~~~p~N~~~glp~~~g~i~L~d~~tG~p~aild~~~lT~~RTaA~sala~~~La~~~~~~vgiiG-~G~qa~~ 143 (326)
T PRK06046 65 IAGVKIVNVHPGNPDRGLPTVMAVIILNSPETGFPLAIMDGTYLTDMRTGAAGGVAAKYLARKDSKVVGIIG-AGNQART 143 (326)
T ss_pred eEEEEEEeeCCCCcccCCCceeEEEEEEeCCCCceEEEEcCccHHHHHHHHHHHHHHHHhCCCCCCEEEEEC-CcHHHHH
Confidence 3678877754333323232222344433332 3488999999985 2333555 67889999996 5788999
Q ss_pred HHHHHhh-cCcEEEe---cChhHHHHHHHHhC----Ccccc-chhhhcccCcceEEEEcCc-----CCHHHHhhCCCCce
Q 006722 468 IAFALCQ-KGIQVVT---LREDEHEKLRKSFG----AKSEC-NNLLLSRSYSQKIWLVGKG-----LTEEEQSKAKKGTI 533 (633)
Q Consensus 468 va~~L~~-~~~~v~l---~~~~~~~~l~~~l~----~~~~~-~~l~~~~~~~~~vw~vg~~-----~~~~~q~~a~~G~~ 533 (633)
.++.|++ ++++.+. |++++.+++++++. ...+. .+..++. .+|+++.-.. ++. | ++++|++
T Consensus 144 h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l--~aDiVv~aTps~~P~~~~-~--~l~~g~h 218 (326)
T PRK06046 144 QLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEAC--DCDILVTTTPSRKPVVKA-E--WIKEGTH 218 (326)
T ss_pred HHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHh--hCCEEEEecCCCCcEecH-H--HcCCCCE
Confidence 9999984 3555554 99999999888862 11111 2222333 2555432111 222 2 5899999
Q ss_pred eecccccCCC
Q 006722 534 FIPFSQFPPN 543 (633)
Q Consensus 534 f~~~~~~~~~ 543 (633)
+..+.-..|.
T Consensus 219 V~~iGs~~p~ 228 (326)
T PRK06046 219 INAIGADAPG 228 (326)
T ss_pred EEecCCCCCc
Confidence 9888644443
No 214
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=94.91 E-value=0.04 Score=59.74 Aligned_cols=139 Identities=14% Similarity=0.167 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEec-ccccccccccCCceEEeeCCCCcceeecCChhHHHHHHhcCCC----CccEEEEe
Q 006722 384 SINRLIEEAILEAEEKGAKVISLG-LMNQGEELNRYGGVFVHKHPQLKMKVVDGSSLAVAVVINSIPK----GTTQVVLR 458 (633)
Q Consensus 384 ~in~~i~~Ai~~A~k~G~kv~~LG-~ln~~e~ln~~g~~~~~k~p~L~irvv~Gnsltaavv~~~i~~----~~~~V~~~ 458 (633)
-|=-+|.+|...|.+.|.-=--|. +|++ .+.+.|.-.-+.++-+|..=.++++.+...+ +-++|+|+
T Consensus 109 QIlGQVK~Ay~~A~~~g~~g~~L~~lf~~--------A~~~aKrVRteT~I~~~~vSv~s~av~~~~~~~~l~~k~vLvI 180 (338)
T PRK00676 109 EIQGQVKRAYLKAARERKLPFALHFLFQK--------ALKEGKVFRSKGGAPYAEVTIESVVQQELRRRQKSKKASLLFI 180 (338)
T ss_pred HHHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHhCCccCCEEEEE
Confidence 344556899999999885311111 2222 4444553333455544433333333332222 33899999
Q ss_pred ccCccHHHHHHHHHhhcCc-EEEe--cChhH--HHHHH-HHhCCccccchhhhcccCcceEEEEcC--------cCCHHH
Q 006722 459 GALTKVAYAIAFALCQKGI-QVVT--LREDE--HEKLR-KSFGAKSECNNLLLSRSYSQKIWLVGK--------GLTEEE 524 (633)
Q Consensus 459 Gatgkig~ava~~L~~~~~-~v~l--~~~~~--~~~l~-~~l~~~~~~~~l~~~~~~~~~vw~vg~--------~~~~~~ 524 (633)
|| |++|+-+|++|.++|+ ++++ |+.++ |+.+. +.+ +. ...+||++.+. .++.++
T Consensus 181 Ga-Gem~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~----------~~-~~~~DvVIs~t~~Tas~~p~i~~~~ 248 (338)
T PRK00676 181 GY-SEINRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREEL----------SF-QDPYDVIFFGSSESAYAFPHLSWES 248 (338)
T ss_pred cc-cHHHHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhh----------hc-ccCCCEEEEcCCcCCCCCceeeHHH
Confidence 99 9999999999999985 4666 55432 22110 110 11 12446665541 344444
Q ss_pred HhhCCCCceeecccccCCCc
Q 006722 525 QSKAKKGTIFIPFSQFPPND 544 (633)
Q Consensus 525 q~~a~~G~~f~~~~~~~~~~ 544 (633)
-...++ -.|+|.+ +|+..
T Consensus 249 ~~~~~~-r~~iDLA-vPRdI 266 (338)
T PRK00676 249 LADIPD-RIVFDFN-VPRTF 266 (338)
T ss_pred HhhccC-cEEEEec-CCCCC
Confidence 333333 4899999 99886
No 215
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.90 E-value=0.037 Score=56.59 Aligned_cols=42 Identities=21% Similarity=0.400 Sum_probs=32.7
Q ss_pred cEEEEecc--CccHHHHHHHHHhhcCcEEEe--cC---hhHHHHHHHHh
Q 006722 453 TQVVLRGA--LTKVAYAIAFALCQKGIQVVT--LR---EDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Ga--tgkig~ava~~L~~~~~~v~l--~~---~~~~~~l~~~l 494 (633)
+.|+++|| +++||+++|+.|+++|.+|.+ |+ +++.+++++++
T Consensus 7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~ 55 (261)
T PRK08690 7 KKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAEL 55 (261)
T ss_pred cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhcc
Confidence 57899997 579999999999999999988 33 34455555554
No 216
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.89 E-value=0.053 Score=57.01 Aligned_cols=119 Identities=18% Similarity=0.266 Sum_probs=71.6
Q ss_pred ecCChhHHHHHHhcCCCCccEEEEeccCccHHHHHHHHHhhcCcE-EEe--cChhHHHHHHHHhCCccccchhhhcccCc
Q 006722 434 VDGSSLAVAVVINSIPKGTTQVVLRGALTKVAYAIAFALCQKGIQ-VVT--LREDEHEKLRKSFGAKSECNNLLLSRSYS 510 (633)
Q Consensus 434 v~Gnsltaavv~~~i~~~~~~V~~~Gatgkig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~ 510 (633)
|||-....+.--..++. .++|++.|| |+.|||++.+|.+.|++ +.+ |+.++-++|.++++.... ..+ ....
T Consensus 105 TD~~Gf~~~L~~~~~~~-~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~~-~~~---~~~~ 178 (272)
T PRK12550 105 TDYIAIAKLLASYQVPP-DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEWR-PDL---GGIE 178 (272)
T ss_pred cCHHHHHHHHHhcCCCC-CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcch-hhc---cccc
Confidence 67766665543233432 258999997 88999999999999875 777 999999999988732211 011 1112
Q ss_pred ceEEE----EcC---------cCCHHHHhhCCCCceeecccccCCCc---ccCC-CCceeecCccccc
Q 006722 511 QKIWL----VGK---------GLTEEEQSKAKKGTIFIPFSQFPPND---KKIR-KDCMYHLTPAMAV 561 (633)
Q Consensus 511 ~~vw~----vg~---------~~~~~~q~~a~~G~~f~~~~~~~~~~---~~~R-~dc~y~~~~a~~~ 561 (633)
++++| +|- .+++ ..++++..+.|..--|+.. .+.| +-|.+..+..|-+
T Consensus 179 ~dlvINaTp~Gm~~~~~~~~~pi~~---~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~~~i~Gl~MLi 243 (272)
T PRK12550 179 ADILVNVTPIGMAGGPEADKLAFPE---AEIDAASVVFDVVALPAETPLIRYARARGKTVITGAEVIA 243 (272)
T ss_pred CCEEEECCccccCCCCccccCCCCH---HHcCCCCEEEEeecCCccCHHHHHHHHCcCeEeCCHHHHH
Confidence 34431 121 1222 2477777788877434332 1112 5577777776655
No 217
>PRK07201 short chain dehydrogenase; Provisional
Probab=94.87 E-value=0.038 Score=63.73 Aligned_cols=42 Identities=19% Similarity=0.293 Sum_probs=38.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.++++||+|+||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 372 k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 415 (657)
T PRK07201 372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEI 415 (657)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 68999999999999999999999999998 8999988887765
No 218
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.86 E-value=0.046 Score=55.86 Aligned_cols=42 Identities=17% Similarity=0.247 Sum_probs=33.4
Q ss_pred cEEEEeccCc--cHHHHHHHHHhhcCcEEEe--cCh---hHHHHHHHHh
Q 006722 453 TQVVLRGALT--KVAYAIAFALCQKGIQVVT--LRE---DEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatg--kig~ava~~L~~~~~~v~l--~~~---~~~~~l~~~l 494 (633)
+.++++||++ +||+|+|+.|+++|.+|.+ |++ +..+++++++
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~ 57 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEI 57 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhc
Confidence 5789999996 8999999999999999988 552 3455555554
No 219
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=94.84 E-value=0.03 Score=53.85 Aligned_cols=107 Identities=19% Similarity=0.249 Sum_probs=65.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEE--EEcC------cCCH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIW--LVGK------GLTE 522 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw--~vg~------~~~~ 522 (633)
++|-++|- |..|+++|+.|.++|.+|.. |++++.++++++- ......+.++.+ .++++ .+-+ .+..
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g--~~~~~s~~e~~~-~~dvvi~~v~~~~~v~~v~~~ 77 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG--AEVADSPAEAAE-QADVVILCVPDDDAVEAVLFG 77 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT--EEEESSHHHHHH-HBSEEEE-SSSHHHHHHHHHC
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh--hhhhhhhhhHhh-cccceEeecccchhhhhhhhh
Confidence 46788887 99999999999999999999 8999999999882 222234443332 23332 2211 1111
Q ss_pred HH-HhhCCCCceeecccccCCCc-----ccCC-CCceeecCcccccCC
Q 006722 523 EE-QSKAKKGTIFIPFSQFPPND-----KKIR-KDCMYHLTPAMAVPA 563 (633)
Q Consensus 523 ~~-q~~a~~G~~f~~~~~~~~~~-----~~~R-~dc~y~~~~a~~~p~ 563 (633)
++ -..+++|+++++.+-.+|+. .+++ +.+.|.+-|.+--|.
T Consensus 78 ~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapV~Gg~~ 125 (163)
T PF03446_consen 78 ENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVDAPVSGGPP 125 (163)
T ss_dssp TTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEEEEEESHHH
T ss_pred hHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeeeeeeecccc
Confidence 00 13468999999999988864 1222 677888888765443
No 220
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.83 E-value=0.05 Score=54.28 Aligned_cols=29 Identities=21% Similarity=0.363 Sum_probs=27.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+.|+|+|+||.||+++|+.|+++|.+|.+
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~ 32 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGFKVVA 32 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCEEEE
Confidence 57899999999999999999999999887
No 221
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=94.82 E-value=0.032 Score=59.34 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=34.1
Q ss_pred EEEeccCccHHHHHHHHHhhcCc-EEEe--cChhHHHHHHHHh
Q 006722 455 VVLRGALTKVAYAIAFALCQKGI-QVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~l 494 (633)
|+++||+|+||+.+|+.|++.+. ++.+ +++..+-.+++++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l 43 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELEREL 43 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHC
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHH
Confidence 78999999999999999999975 4555 9999999999996
No 222
>PRK08226 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.046 Score=55.20 Aligned_cols=33 Identities=18% Similarity=0.412 Sum_probs=29.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LRED 485 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~ 485 (633)
+.++++||+|.||+++|+.|+++|.+|.+ |+++
T Consensus 7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~ 41 (263)
T PRK08226 7 KTALITGALQGIGEGIARVFARHGANLILLDISPE 41 (263)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH
Confidence 68999999999999999999999999998 6543
No 223
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.80 E-value=0.055 Score=56.89 Aligned_cols=42 Identities=21% Similarity=0.272 Sum_probs=35.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--c-ChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--L-REDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~l 494 (633)
+.++|+||+|+||+++|+.|+++|.+|.+ + +.++.+++.+++
T Consensus 13 k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i 57 (306)
T PRK07792 13 KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEI 57 (306)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHH
Confidence 68999999999999999999999999998 3 445666666554
No 224
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=94.75 E-value=0.039 Score=60.74 Aligned_cols=133 Identities=14% Similarity=0.120 Sum_probs=75.3
Q ss_pred CccEEEEeccCccHHHHHHHHHhhc-CcEEEe--cChhHHHHHHHHhCCcccc-ch---hhhccc---CcceEE--EEcC
Q 006722 451 GTTQVVLRGALTKVAYAIAFALCQK-GIQVVT--LREDEHEKLRKSFGAKSEC-NN---LLLSRS---YSQKIW--LVGK 518 (633)
Q Consensus 451 ~~~~V~~~Gatgkig~ava~~L~~~-~~~v~l--~~~~~~~~l~~~l~~~~~~-~~---l~~~~~---~~~~vw--~vg~ 518 (633)
...+|+++||||-+|+.+.+.|.++ +.+++. ++++.-+.+...- +... .. ..+... .++|++ .+|.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~--~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~ 114 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVF--PHLITQDLPNLVAVKDADFSDVDAVFCCLPH 114 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhC--ccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence 3469999999999999999999988 888877 3322222222211 1100 01 111111 145664 4555
Q ss_pred cCCHHHHhhCCCCceeecccccCCCcccCC--CCceeecC--cccccCCccccccccccCCC---------cc-hhhh-H
Q 006722 519 GLTEEEQSKAKKGTIFIPFSQFPPNDKKIR--KDCMYHLT--PAMAVPAAFENVDSCENWLP---------RR-VMSA-W 583 (633)
Q Consensus 519 ~~~~~~q~~a~~G~~f~~~~~~~~~~~~~R--~dc~y~~~--~a~~~p~~~~~~~~~e~~~p---------~~-~~~A-c 583 (633)
..+.+-=..+.+|..+||.| ...| +|..|.+- -....|+-.+ .+-+++| ++ +.-+ |
T Consensus 115 ~~s~~i~~~~~~g~~VIDlS------s~fRl~~~~~y~~~y~~p~~~pe~~~---~~~yglpE~~r~~i~~~~iIAnPgC 185 (381)
T PLN02968 115 GTTQEIIKALPKDLKIVDLS------ADFRLRDIAEYEEWYGHPHRAPELQK---EAVYGLTELQREEIKSARLVANPGC 185 (381)
T ss_pred HHHHHHHHHHhCCCEEEEcC------chhccCCcccchhccCCCCCCcccch---hhhcccchhCHHHhcCCCEEECCCC
Confidence 44443333355899999999 6677 45666654 2233444222 2234443 22 2222 9
Q ss_pred hhhhhhhhccC
Q 006722 584 RIGGIVHALEG 594 (633)
Q Consensus 584 ~a~~~v~alEg 594 (633)
.+-+++++|--
T Consensus 186 ~~t~~~laL~P 196 (381)
T PLN02968 186 YPTGIQLPLVP 196 (381)
T ss_pred HHHHHHHHHHH
Confidence 99999988743
No 225
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=94.75 E-value=0.11 Score=57.85 Aligned_cols=91 Identities=22% Similarity=0.317 Sum_probs=62.9
Q ss_pred CccEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHhCCcccc-chhhhcccCcceEEEEc-----CcCC
Q 006722 451 GTTQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSFGAKSEC-NNLLLSRSYSQKIWLVG-----KGLT 521 (633)
Q Consensus 451 ~~~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l~~~~~~-~~l~~~~~~~~~vw~vg-----~~~~ 521 (633)
..++|+++|| |.+|.-+|.+|+++|++.++ |+.+|-++|.+++|+.... +.+.... .++||++.+ -+++
T Consensus 177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~l-~~~DvVissTsa~~~ii~ 254 (414)
T COG0373 177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEAL-AEADVVISSTSAPHPIIT 254 (414)
T ss_pred ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHhh-hhCCEEEEecCCCccccC
Confidence 3489999998 78999999999999966555 9999999999999633322 2222222 155665443 2344
Q ss_pred HHH---HhhCCCCceeecccccCCCc
Q 006722 522 EEE---QSKAKKGTIFIPFSQFPPND 544 (633)
Q Consensus 522 ~~~---q~~a~~G~~f~~~~~~~~~~ 544 (633)
.++ ..+.+++.+++|++ +|+..
T Consensus 255 ~~~ve~a~~~r~~~livDia-vPRdi 279 (414)
T COG0373 255 REMVERALKIRKRLLIVDIA-VPRDV 279 (414)
T ss_pred HHHHHHHHhcccCeEEEEec-CCCCC
Confidence 443 33345557899999 99885
No 226
>PRK12744 short chain dehydrogenase; Provisional
Probab=94.75 E-value=0.048 Score=55.06 Aligned_cols=29 Identities=24% Similarity=0.346 Sum_probs=26.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+.|+++||+|.||+++|+.|+++|.+|.+
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~G~~vv~ 37 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQGAKAVA 37 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCcEEE
Confidence 68999999999999999999999999554
No 227
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=94.75 E-value=0.069 Score=55.94 Aligned_cols=38 Identities=21% Similarity=0.184 Sum_probs=32.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKL 490 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l 490 (633)
+.|+|+||+|.||+++|+.|.++|.+|.+ |+.++.++.
T Consensus 6 k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 45 (325)
T PLN02989 6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKT 45 (325)
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhH
Confidence 68999999999999999999999999876 666554443
No 228
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=94.72 E-value=0.057 Score=53.43 Aligned_cols=42 Identities=19% Similarity=0.269 Sum_probs=34.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--c-ChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--L-REDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~l 494 (633)
+.++++||+|.||+++|+.|+++|.+|++ | ++++.+++.+++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 45 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQ 45 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 46899999999999999999999999877 4 666666555443
No 229
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.68 E-value=0.049 Score=55.74 Aligned_cols=42 Identities=21% Similarity=0.353 Sum_probs=35.0
Q ss_pred cEEEEecc--CccHHHHHHHHHhhcCcEEEe-----cChhHHHHHHHHh
Q 006722 453 TQVVLRGA--LTKVAYAIAFALCQKGIQVVT-----LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Ga--tgkig~ava~~L~~~~~~v~l-----~~~~~~~~l~~~l 494 (633)
+.|+++|| +++||+|+|+.|+++|.+|.+ |++++++++.+++
T Consensus 7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~ 55 (260)
T PRK06997 7 KRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF 55 (260)
T ss_pred cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc
Confidence 67999997 579999999999999999987 3457777777665
No 230
>PRK07023 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.033 Score=55.63 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=29.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LRED 485 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~ 485 (633)
..|+++||||.||+++|+.|+++|.+|++ |+.+
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~ 36 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRH 36 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcc
Confidence 36899999999999999999999999988 6544
No 231
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.67 E-value=0.037 Score=55.83 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=29.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LRED 485 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~ 485 (633)
+.|+++||+|+||+++|+.|+++|.+|.+ |+++
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh
Confidence 68999999999999999999999999988 5544
No 232
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.61 E-value=0.074 Score=56.00 Aligned_cols=129 Identities=12% Similarity=0.015 Sum_probs=75.4
Q ss_pred ecCChhHHHHHHhcC--CCCccEEEEeccCccHHHHHHHHHhhcCc-EEEe--cChhHHHHHHHHhCCcccc---chhhh
Q 006722 434 VDGSSLAVAVVINSI--PKGTTQVVLRGALTKVAYAIAFALCQKGI-QVVT--LREDEHEKLRKSFGAKSEC---NNLLL 505 (633)
Q Consensus 434 v~Gnsltaavv~~~i--~~~~~~V~~~Gatgkig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~l~~~~~~---~~l~~ 505 (633)
|||.-...+.--+.+ +..-++|+|.|| |+.|||++.+|.+.|+ ++++ |+.+|-++|.++++..... ..+.+
T Consensus 105 TD~~G~~~~l~~~~~~~~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~ 183 (282)
T TIGR01809 105 TDWDGIAGALANIGKFEPLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSG 183 (282)
T ss_pred CCHHHHHHHHHhhCCccccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhh
Confidence 677766666643332 123478999998 8999999999999987 5777 9999999999887321111 11111
Q ss_pred cc--cCcceEE----EEcCcCCHHHHh---------hCCCCceeecccccCCCc---ccCC-CCceeecCcccccCC
Q 006722 506 SR--SYSQKIW----LVGKGLTEEEQS---------KAKKGTIFIPFSQFPPND---KKIR-KDCMYHLTPAMAVPA 563 (633)
Q Consensus 506 ~~--~~~~~vw----~vg~~~~~~~q~---------~a~~G~~f~~~~~~~~~~---~~~R-~dc~y~~~~a~~~p~ 563 (633)
.. ..+++++ -+|..+++++.. ..+++..+.|..=-|... .+.| +-|....+..|-+-.
T Consensus 184 ~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Q 260 (282)
T TIGR01809 184 GLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDPWPTPLVAIVSAAGWRVISGLQMLLHQ 260 (282)
T ss_pred hhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCCCCCHHHHHHHHCCCEEECcHHHHHHH
Confidence 11 1134454 455555554422 124566777776333221 1112 447777777666533
No 233
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.60 E-value=0.036 Score=54.75 Aligned_cols=33 Identities=24% Similarity=0.345 Sum_probs=29.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LRED 485 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~ 485 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |+.+
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~ 38 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAI 38 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 57999999999999999999999999988 5544
No 234
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.58 E-value=0.031 Score=51.20 Aligned_cols=95 Identities=19% Similarity=0.236 Sum_probs=55.1
Q ss_pred EEEEeccCccHHHHHHHHHhhc-CcEEEe---cChhHHHHHHHHhCCccccchhh-hc-cc---CcceEE--EEcCcCCH
Q 006722 454 QVVLRGALTKVAYAIAFALCQK-GIQVVT---LREDEHEKLRKSFGAKSECNNLL-LS-RS---YSQKIW--LVGKGLTE 522 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~-~~~v~l---~~~~~~~~l~~~l~~~~~~~~l~-~~-~~---~~~~vw--~vg~~~~~ 522 (633)
+|+++||||-+|+.+++.|.+. ...++. ++++.-+.+....+.+....++. +. .. .++|++ ..++..+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~~~ 80 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGASK 80 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHHHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhHHH
Confidence 5899999999999999999987 666555 33313233333321111111111 11 10 155664 44443332
Q ss_pred H-HHhhCCCCceeecccccCCCcccCC--CCceee
Q 006722 523 E-EQSKAKKGTIFIPFSQFPPNDKKIR--KDCMYH 554 (633)
Q Consensus 523 ~-~q~~a~~G~~f~~~~~~~~~~~~~R--~dc~y~ 554 (633)
+ .+.-+++|..++|.| ..+| +||.|.
T Consensus 81 ~~~~~~~~~g~~ViD~s------~~~R~~~~~~~~ 109 (121)
T PF01118_consen 81 ELAPKLLKAGIKVIDLS------GDFRLDDDVPYG 109 (121)
T ss_dssp HHHHHHHHTTSEEEESS------STTTTSTTSEEE
T ss_pred HHHHHHhhCCcEEEeCC------HHHhCCCCCCEE
Confidence 2 334469999999999 7777 567664
No 235
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.56 E-value=0.05 Score=60.35 Aligned_cols=37 Identities=27% Similarity=0.307 Sum_probs=32.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEK 489 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~ 489 (633)
++|+++||+|+||+++|+.|+++|.+|.. |++++.++
T Consensus 179 K~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~ 217 (406)
T PRK07424 179 KTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITL 217 (406)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 57999999999999999999999999987 77666543
No 236
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.56 E-value=0.064 Score=53.51 Aligned_cols=29 Identities=34% Similarity=0.418 Sum_probs=27.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+.|+++||+|.||+++|+.|+++|.++.+
T Consensus 7 ~~vlitGasg~iG~~l~~~l~~~g~~v~~ 35 (252)
T PRK06077 7 KVVVVTGSGRGIGRAIAVRLAKEGSLVVV 35 (252)
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEE
Confidence 68999999999999999999999999876
No 237
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=94.55 E-value=0.12 Score=58.36 Aligned_cols=60 Identities=27% Similarity=0.343 Sum_probs=46.2
Q ss_pred ecCChhHHHHHHhcCCCCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 434 VDGSSLAVAVVINSIPKGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 434 v~Gnsltaavv~~~i~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
|||.....+.--+..+..-+.|+++|+ |++|++++..|.+.|.++.+ |+.++.+++.+++
T Consensus 314 TD~~G~~~~l~~~~~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~ 375 (477)
T PRK09310 314 TDGEGLFSLLKQKNIPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC 375 (477)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 666655555432233334478999996 89999999999999999888 8888999888876
No 238
>PLN00015 protochlorophyllide reductase
Probab=94.45 E-value=0.046 Score=57.45 Aligned_cols=40 Identities=33% Similarity=0.346 Sum_probs=36.1
Q ss_pred EEeccCccHHHHHHHHHhhcC-cEEEe--cChhHHHHHHHHhC
Q 006722 456 VLRGALTKVAYAIAFALCQKG-IQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 456 ~~~Gatgkig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~l~ 495 (633)
+++||+++||+++|+.|+++| .+|.+ |++++.+++.++++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~ 43 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG 43 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhc
Confidence 489999999999999999999 89988 89999888888873
No 239
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.44 E-value=0.079 Score=56.44 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=31.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKL 490 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l 490 (633)
++|+++||||-||+++|+.|+++|.+|+. |+++.....
T Consensus 5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 44 (349)
T TIGR02622 5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNL 44 (349)
T ss_pred CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhH
Confidence 57999999999999999999999999987 555543333
No 240
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.43 E-value=0.05 Score=51.08 Aligned_cols=69 Identities=22% Similarity=0.232 Sum_probs=44.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHhCCccccchhhhcccCcceEEEE---cCcCCHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIWLV---GKGLTEEE 524 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw~v---g~~~~~~~ 524 (633)
-+|-++|| |++|.+++++|.+.|..|.- |+.+.-++++.+++.... .++.+... ++|++++ ||-|.+--
T Consensus 11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~-~~~~~~~~-~aDlv~iavpDdaI~~va 85 (127)
T PF10727_consen 11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAI-LDLEEILR-DADLVFIAVPDDAIAEVA 85 (127)
T ss_dssp -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT------TTGGGC-C-SEEEE-S-CCHHHHHH
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccc-cccccccc-cCCEEEEEechHHHHHHH
Confidence 47889999 99999999999999998876 888888888888743333 24444442 5677654 55555543
No 241
>PRK06398 aldose dehydrogenase; Validated
Probab=94.42 E-value=0.04 Score=56.07 Aligned_cols=34 Identities=18% Similarity=0.353 Sum_probs=30.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDE 486 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~ 486 (633)
+.|+++||+|+||+++|+.|+++|.+|++ |++++
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~ 42 (258)
T PRK06398 7 KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS 42 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc
Confidence 68999999999999999999999999998 55443
No 242
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=94.35 E-value=0.033 Score=57.34 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=29.8
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEH 487 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~ 487 (633)
.|+|+||||.||+.+++.|.++|.+|.. |+.++.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~ 36 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS 36 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc
Confidence 3899999999999999999999988888 776643
No 243
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.34 E-value=0.063 Score=54.27 Aligned_cols=29 Identities=24% Similarity=0.395 Sum_probs=27.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+.++++|++|+||+++|+.|+++|.+|.+
T Consensus 11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~ 39 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLAEAGCDIVG 39 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEE
Confidence 68999999999999999999999999987
No 244
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.33 E-value=0.068 Score=54.47 Aligned_cols=42 Identities=19% Similarity=0.277 Sum_probs=34.2
Q ss_pred cEEEEeccC--ccHHHHHHHHHhhcCcEEEe--cChh---HHHHHHHHh
Q 006722 453 TQVVLRGAL--TKVAYAIAFALCQKGIQVVT--LRED---EHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gat--gkig~ava~~L~~~~~~v~l--~~~~---~~~~l~~~l 494 (633)
+.|+++||+ ++||+++|+.|+++|.+|.+ |+++ +.+++++++
T Consensus 11 k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~ 59 (258)
T PRK07533 11 KRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL 59 (258)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh
Confidence 688999999 49999999999999999988 6543 356666665
No 245
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.30 E-value=0.07 Score=55.65 Aligned_cols=41 Identities=15% Similarity=0.379 Sum_probs=33.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cCh-hHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LRE-DEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~ 493 (633)
+.|+++||+|.||+++|+.|+++|.+|.+ |++ ++.+.+.++
T Consensus 47 k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~ 90 (290)
T PRK06701 47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQR 90 (290)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH
Confidence 67999999999999999999999999988 543 344444444
No 246
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.28 E-value=0.063 Score=63.17 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=38.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+|+||+|+||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 415 kvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l 458 (676)
T TIGR02632 415 RVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEI 458 (676)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Confidence 78999999999999999999999999998 8888888777665
No 247
>PLN02686 cinnamoyl-CoA reductase
Probab=94.25 E-value=0.063 Score=58.15 Aligned_cols=40 Identities=28% Similarity=0.377 Sum_probs=34.2
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHH
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLR 491 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~ 491 (633)
-+.|+|+||||.||+++|+.|.++|.+|.+ |+.++.+.++
T Consensus 53 ~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 53 ARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 478999999999999999999999999875 7776665553
No 248
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.23 E-value=0.12 Score=54.64 Aligned_cols=61 Identities=23% Similarity=0.247 Sum_probs=45.3
Q ss_pred eecCChhHHHHHHhcCCCCccEEEEeccCccHHHHHHHHHhhcCc-EEEe--cChhHHHHHHHHh
Q 006722 433 VVDGSSLAVAVVINSIPKGTTQVVLRGALTKVAYAIAFALCQKGI-QVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 433 vv~Gnsltaavv~~~i~~~~~~V~~~Gatgkig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~l 494 (633)
=|||.-...+.--+..+..-++|++.|| |+.|||++.+|++.|+ ++.+ |+.+|-++|.+++
T Consensus 108 NTD~~Gf~~~L~~~~~~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~ 171 (283)
T PRK14027 108 NTDVSGFGRGMEEGLPNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_pred cCCHHHHHHHHHhcCcCcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 3666666655532112233478999998 8899999999999987 4556 9999999998876
No 249
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=94.23 E-value=0.074 Score=54.16 Aligned_cols=44 Identities=14% Similarity=0.254 Sum_probs=40.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcc
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKS 498 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~ 498 (633)
.+|+++|++++||++.|..+.+-|-+|++ |+++|+++.+.+. |.
T Consensus 6 nTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~--p~ 51 (245)
T COG3967 6 NTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN--PE 51 (245)
T ss_pred cEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC--cc
Confidence 46899999999999999999999999999 9999999999885 65
No 250
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.22 E-value=0.074 Score=54.78 Aligned_cols=41 Identities=20% Similarity=0.428 Sum_probs=32.4
Q ss_pred cEEEEeccCc--cHHHHHHHHHhhcCcEEEe--cCh---hHHHHHHHH
Q 006722 453 TQVVLRGALT--KVAYAIAFALCQKGIQVVT--LRE---DEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatg--kig~ava~~L~~~~~~v~l--~~~---~~~~~l~~~ 493 (633)
+.++++||+| +||+|+|+.|+++|.+|.+ |+. +..++++++
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~ 54 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ 54 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhc
Confidence 5789999995 9999999999999999988 552 344555444
No 251
>PLN02583 cinnamoyl-CoA reductase
Probab=94.18 E-value=0.072 Score=55.65 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=28.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LR 483 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~ 483 (633)
+.|+|+||||.||+++++.|.++|.+|.. |+
T Consensus 7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~ 39 (297)
T PLN02583 7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQK 39 (297)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 68999999999999999999999999987 64
No 252
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=94.17 E-value=0.097 Score=55.53 Aligned_cols=29 Identities=21% Similarity=0.179 Sum_probs=27.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
++|+|+||||-||+++++.|.++|.+|..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~ 29 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHG 29 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEE
Confidence 47999999999999999999999999987
No 253
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=94.16 E-value=0.073 Score=56.45 Aligned_cols=42 Identities=12% Similarity=0.205 Sum_probs=34.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcC--cEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKG--IQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~--~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+|+||+|.||+++|+.|+++| .+|.+ |+..+.+++++++
T Consensus 5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~ 50 (324)
T TIGR03589 5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF 50 (324)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh
Confidence 579999999999999999999986 67776 6666666666664
No 254
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=94.14 E-value=0.11 Score=55.73 Aligned_cols=114 Identities=18% Similarity=0.136 Sum_probs=69.2
Q ss_pred ceEEeeCCCCc--cee-ecCChhHH-------HHHHhcC-CCCccEEEEeccCccHHHHHHHHHh-hcCc-EEEe--cCh
Q 006722 420 GVFVHKHPQLK--MKV-VDGSSLAV-------AVVINSI-PKGTTQVVLRGALTKVAYAIAFALC-QKGI-QVVT--LRE 484 (633)
Q Consensus 420 ~~~~~k~p~L~--irv-v~Gnslta-------avv~~~i-~~~~~~V~~~Gatgkig~ava~~L~-~~~~-~v~l--~~~ 484 (633)
++.+--+|+-. ..+ .||+.+|+ ++....+ +++.++|.++|+ |..|++.+++|+ .+++ +|.+ |+.
T Consensus 86 g~i~l~d~~tG~~~ai~~d~~~lT~~RTaa~~~laa~~la~~~~~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~R~~ 164 (326)
T TIGR02992 86 GMMVLLSSRTGLLQALLLDNGYLTDVRTAAAGAVAARHLAREDSSVVAIFGA-GMQARLQLEALTLVRDIRSARIWARDS 164 (326)
T ss_pred EEEEEEECCCCCceEEEcCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECC-CHHHHHHHHHHHHhCCccEEEEECCCH
Confidence 34444445443 334 37776663 1222222 567789999998 899999999998 4664 4666 999
Q ss_pred hHHHHHHHHhC----Ccccc-chhhhcccCcceEEEEc-----CcCCHHHHhhCCCCceeeccc
Q 006722 485 DEHEKLRKSFG----AKSEC-NNLLLSRSYSQKIWLVG-----KGLTEEEQSKAKKGTIFIPFS 538 (633)
Q Consensus 485 ~~~~~l~~~l~----~~~~~-~~l~~~~~~~~~vw~vg-----~~~~~~~q~~a~~G~~f~~~~ 538 (633)
++.+++.+++. ..-.. .++.++.. ++||++.- -.++++ ++++|+++..+.
T Consensus 165 ~~a~~~a~~~~~~~g~~v~~~~~~~~av~-~aDiVvtaT~s~~p~i~~~---~l~~g~~i~~vg 224 (326)
T TIGR02992 165 AKAEALALQLSSLLGIDVTAATDPRAAMS-GADIIVTTTPSETPILHAE---WLEPGQHVTAMG 224 (326)
T ss_pred HHHHHHHHHHHhhcCceEEEeCCHHHHhc-cCCEEEEecCCCCcEecHH---HcCCCcEEEeeC
Confidence 99999988861 11111 22222221 55664321 123444 489999998775
No 255
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.10 E-value=0.11 Score=55.71 Aligned_cols=167 Identities=20% Similarity=0.243 Sum_probs=100.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKVI--SLG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn 437 (633)
+.+-+.-+..-++.|++.|++.. -|. +++.++++|.|- ++.++.= | .++ .+=|||=
T Consensus 44 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl 123 (301)
T PRK14194 44 DPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGF 123 (301)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCcc
Confidence 33445555666778999999864 443 334446788874 3555431 1 232 1224554
Q ss_pred h----------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 438 S----------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 438 s----------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+ -|++.|++=+.. .-++|.++|.++-+|+.+|..|.++|..|++ +..+
T Consensus 124 ~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~--------- 194 (301)
T PRK14194 124 HSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST--------- 194 (301)
T ss_pred ChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC---------
Confidence 3 356666655543 3389999999999999999999999999999 2211
Q ss_pred CCccccchhhhcc-cCcceEEEEcCcCCHHHHhhCCCCceeecccccCCCc--c--cCCCCceeec-----CcccccCCc
Q 006722 495 GAKSECNNLLLSR-SYSQKIWLVGKGLTEEEQSKAKKGTIFIPFSQFPPND--K--KIRKDCMYHL-----TPAMAVPAA 564 (633)
Q Consensus 495 ~~~~~~~~l~~~~-~~~~~vw~vg~~~~~~~q~~a~~G~~f~~~~~~~~~~--~--~~R~dc~y~~-----~~a~~~p~~ 564 (633)
++.+.+ ++|..+..+|+. ..-+..++++|+++||++ +.+.. . ++.-|+-+.+ .....||+.
T Consensus 195 -------~l~e~~~~ADIVIsavg~~-~~v~~~~ik~GaiVIDvg-in~~~~~g~~kl~GDvdf~~~~~~a~~iTPVPGG 265 (301)
T PRK14194 195 -------DAKALCRQADIVVAAVGRP-RLIDADWLKPGAVVIDVG-INRIDDDGRSRLVGDVDFDSALPVVSAITPVPGG 265 (301)
T ss_pred -------CHHHHHhcCCEEEEecCCh-hcccHhhccCCcEEEEec-ccccCCCCCcceecccchHHHHhhcceecCCCCc
Confidence 233333 335555555553 222233599999999999 55421 0 2456665432 222446765
Q ss_pred cc
Q 006722 565 FE 566 (633)
Q Consensus 565 ~~ 566 (633)
+-
T Consensus 266 VG 267 (301)
T PRK14194 266 VG 267 (301)
T ss_pred hh
Confidence 43
No 256
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.09 E-value=0.11 Score=55.03 Aligned_cols=60 Identities=20% Similarity=0.192 Sum_probs=42.5
Q ss_pred ecCChhHHHHHHhcCCCCccEEEEeccCccHHHHHHHHHhhcCc-EEEe--cC---hhHHHHHHHHh
Q 006722 434 VDGSSLAVAVVINSIPKGTTQVVLRGALTKVAYAIAFALCQKGI-QVVT--LR---EDEHEKLRKSF 494 (633)
Q Consensus 434 v~Gnsltaavv~~~i~~~~~~V~~~Gatgkig~ava~~L~~~~~-~v~l--~~---~~~~~~l~~~l 494 (633)
|||--...+.--..+...-++|+|.|| |+.||||+..|+++|+ ++++ |+ .+|.++|.+++
T Consensus 106 TD~~Gf~~~l~~~~~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~ 171 (288)
T PRK12749 106 TDGTGHIRAIKESGFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRV 171 (288)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHh
Confidence 566555555433333333378999998 5559999999999987 5666 77 35888888876
No 257
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.09 E-value=0.079 Score=54.07 Aligned_cols=29 Identities=21% Similarity=0.355 Sum_probs=26.8
Q ss_pred cEEEEeccC--ccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGAL--TKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gat--gkig~ava~~L~~~~~~v~l 481 (633)
+.|+++||+ ++||+++|+.|+++|.+|.+
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G~~v~~ 37 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAGAELGI 37 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCCCEEEE
Confidence 678999986 79999999999999999987
No 258
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=94.03 E-value=0.032 Score=57.29 Aligned_cols=101 Identities=18% Similarity=0.166 Sum_probs=59.3
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEEEEcCcCCHHHHhhCCCC
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIWLVGKGLTEEEQSKAKKG 531 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw~vg~~~~~~~q~~a~~G 531 (633)
.|+|+|+||-||+++++.|.++|.+|.. |+.+....+. .-..++.++..+.+....+..+
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------------~~~~~~~~d~~~~~~~~~~~~~ 63 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------------SGVEFVVLDLTDRDLVDELAKG 63 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------------cccceeeecccchHHHHHHHhc
Confidence 3899999999999999999999999998 3232211100 0112455555554332222222
Q ss_pred ceeecccccCCCcccCCCCceeecCcccccCCcccc----ccccccCCCcchhhhHhhhhh
Q 006722 532 TIFIPFSQFPPNDKKIRKDCMYHLTPAMAVPAAFEN----VDSCENWLPRRVMSAWRIGGI 588 (633)
Q Consensus 532 ~~f~~~~~~~~~~~~~R~dc~y~~~~a~~~p~~~~~----~~~~e~~~p~~~~~Ac~a~~~ 588 (633)
. + |+.++--.....+....+ +..-|....+++..||.++++
T Consensus 64 ~---------------~-d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~ 108 (314)
T COG0451 64 V---------------P-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV 108 (314)
T ss_pred C---------------C-CEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1 1 566665555554444321 335566666777777777444
No 259
>PRK06940 short chain dehydrogenase; Provisional
Probab=93.99 E-value=0.09 Score=54.26 Aligned_cols=40 Identities=30% Similarity=0.346 Sum_probs=33.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++|| |+||+++|+.|+ +|.+|.+ |++++.+++.+++
T Consensus 3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l 44 (275)
T PRK06940 3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTL 44 (275)
T ss_pred CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHH
Confidence 35677887 799999999996 7999998 8888888777665
No 260
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=93.97 E-value=0.056 Score=54.81 Aligned_cols=34 Identities=21% Similarity=0.398 Sum_probs=30.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDE 486 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~ 486 (633)
+.|+++||+|+||+++|+.|.++|.+|++ +++++
T Consensus 10 k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~ 45 (266)
T PRK06171 10 KIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGD 45 (266)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 67999999999999999999999999998 55443
No 261
>PLN02650 dihydroflavonol-4-reductase
Probab=93.96 E-value=0.065 Score=57.04 Aligned_cols=40 Identities=18% Similarity=0.246 Sum_probs=33.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRK 492 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 492 (633)
++|+|+||||-||+++++.|.++|.+|.. |+.++.+.++.
T Consensus 6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~ 47 (351)
T PLN02650 6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKH 47 (351)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHH
Confidence 68999999999999999999999999986 76666555443
No 262
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=93.90 E-value=0.22 Score=50.75 Aligned_cols=161 Identities=18% Similarity=0.159 Sum_probs=88.6
Q ss_pred EEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHhCCcccc-chhhhcccCcceEEEEc----CcCC-HHHH
Q 006722 455 VVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSFGAKSEC-NNLLLSRSYSQKIWLVG----KGLT-EEEQ 525 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l~~~~~~-~~l~~~~~~~~~vw~vg----~~~~-~~~q 525 (633)
....|+||.||.++|+.|.+.|..|.+ |.++.++...++++-. .. ....++.+ .++|+++= ++.+ .+|-
T Consensus 3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~-i~~~~~~dA~~-~aDVVvLAVP~~a~~~v~~~l 80 (211)
T COG2085 3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL-ITGGSNEDAAA-LADVVVLAVPFEAIPDVLAEL 80 (211)
T ss_pred EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc-cccCChHHHHh-cCCEEEEeccHHHHHhHHHHH
Confidence 467899999999999999999999999 7888899998888322 22 22223332 45554220 0111 1222
Q ss_pred hhCCCCceeecccccCCCcccCCCCceee---cCccc-----ccCCccccccccccCCCcchhhhHhhhhhhhhccCC--
Q 006722 526 SKAKKGTIFIPFSQFPPNDKKIRKDCMYH---LTPAM-----AVPAAFENVDSCENWLPRRVMSAWRIGGIVHALEGW-- 595 (633)
Q Consensus 526 ~~a~~G~~f~~~~~~~~~~~~~R~dc~y~---~~~a~-----~~p~~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw-- 595 (633)
+.+-.|.+++|.. +|-.. ..++-=+|. ++.+. .+|++ +-+..||+ +| ++.+..+..-
T Consensus 81 ~~~~~~KIvID~t-np~~~-~~~~~~~~~~~~~~saae~va~~lp~a-kVVkAFn~-i~---------a~~l~~~~~~~~ 147 (211)
T COG2085 81 RDALGGKIVIDAT-NPIEV-NGEPGDLYLVPSEGSAAEIVAKLLPGA-KVVKAFNT-IP---------AAVLADLAKPGG 147 (211)
T ss_pred HHHhCCeEEEecC-CCccc-cCCccccccCCCCCcHHHHHHHHCCCc-chhhhhcc-cC---------HHHhccCCCcCC
Confidence 2234478888877 55321 144333332 22222 14443 11112221 11 1222222221
Q ss_pred --CccccCcccccHHHHHHHHHhcCCcccchhccccc
Q 006722 596 --NEHECGYAISNIHNVWEAALRHGFHPLTATILTQS 630 (633)
Q Consensus 596 --~~~e~G~~i~~i~~i~~aa~kHGF~p~~~~~~~~~ 630 (633)
..==||++-+-.+++.+++.+-||+|+..--|.++
T Consensus 148 ~~~v~vagDD~~Ak~~v~~L~~~iG~~~ld~G~L~~a 184 (211)
T COG2085 148 RRDVLVAGDDAEAKAVVAELAEDIGFRPLDAGPLENA 184 (211)
T ss_pred ceeEEEecCcHHHHHHHHHHHHhcCcceeeccccccc
Confidence 11134665467789999999999999655444443
No 263
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=93.83 E-value=0.92 Score=48.83 Aligned_cols=141 Identities=15% Similarity=0.167 Sum_probs=83.1
Q ss_pred HcCCcEEEecccccccccccCCceEEeeCCC--CcceeecCChhHH-------HHHHhcC-CCCccEEEEeccCccHHHH
Q 006722 398 EKGAKVISLGLMNQGEELNRYGGVFVHKHPQ--LKMKVVDGSSLAV-------AVVINSI-PKGTTQVVLRGALTKVAYA 467 (633)
Q Consensus 398 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~--L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatgkig~a 467 (633)
-.|+|+++.--=|....+-.--++.+--++. .-+.+.||+.+|+ |++.+-+ +++.++|.++| +|..|++
T Consensus 64 ~~g~K~v~~~p~N~~~glp~~~g~i~L~d~~tG~p~ai~d~~~lT~~RTaA~salaa~~La~~~~~~lgiiG-~G~qA~~ 142 (325)
T TIGR02371 64 MAGVKCVNVHPGNPDRHLPTVMALIILVSPETGFPIALMDGTYITDMRTGAAGGVAAKYLARKDSSVLGIIG-AGRQAWT 142 (325)
T ss_pred eEEEEEEeecCCchhcCCCcceEEEEEeeCCCCCeEEEEeCcchhhHHHHHHHHHHHHHhCCCCCCEEEEEC-CCHHHHH
Confidence 3678887753323222222222344444433 3488999999984 2333545 67889999996 5779999
Q ss_pred HHHHHhh--cCcEEEe--cChhHHHHHHHHhCCc---cc-cchhhhcccCcceEEEE-c---CcCCHHHHhhCCCCceee
Q 006722 468 IAFALCQ--KGIQVVT--LREDEHEKLRKSFGAK---SE-CNNLLLSRSYSQKIWLV-G---KGLTEEEQSKAKKGTIFI 535 (633)
Q Consensus 468 va~~L~~--~~~~v~l--~~~~~~~~l~~~l~~~---~~-~~~l~~~~~~~~~vw~v-g---~~~~~~~q~~a~~G~~f~ 535 (633)
-+++|+. +..+|.+ |++++.+.+.+++... -+ .....++.+ ++||++. - +.+-..| +++||++++
T Consensus 143 ~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~-~aDiVitaT~s~~P~~~~~--~l~~g~~v~ 219 (325)
T TIGR02371 143 QLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVE-GCDILVTTTPSRKPVVKAD--WVSEGTHIN 219 (325)
T ss_pred HHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhc-cCCEEEEecCCCCcEecHH--HcCCCCEEE
Confidence 7777764 3666666 9999999888875211 01 122222221 5565422 1 2221222 699999999
Q ss_pred cccccCC
Q 006722 536 PFSQFPP 542 (633)
Q Consensus 536 ~~~~~~~ 542 (633)
.+....|
T Consensus 220 ~vGs~~p 226 (325)
T TIGR02371 220 AIGADAP 226 (325)
T ss_pred ecCCCCc
Confidence 8874333
No 264
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=93.74 E-value=0.1 Score=52.29 Aligned_cols=43 Identities=33% Similarity=0.434 Sum_probs=33.8
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhH--HHHHHHHh
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDE--HEKLRKSF 494 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~--~~~l~~~l 494 (633)
-+.|+++||+++||+++|+.|+++|.+|++ ++.++ .+.+.++.
T Consensus 5 ~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~ 51 (251)
T COG1028 5 GKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAI 51 (251)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHH
Confidence 367999999999999999999999999776 54443 45555553
No 265
>PRK12367 short chain dehydrogenase; Provisional
Probab=93.73 E-value=0.081 Score=54.15 Aligned_cols=32 Identities=22% Similarity=0.305 Sum_probs=29.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cCh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LRE 484 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~ 484 (633)
+.++++||+|+||+++|+.|+++|.+|.+ |++
T Consensus 15 k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc
Confidence 68999999999999999999999999987 554
No 266
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=93.62 E-value=0.25 Score=48.41 Aligned_cols=89 Identities=25% Similarity=0.213 Sum_probs=60.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEecChhHHHHHHHHhCCccccchhhhccc-CcceEEEEc--CcCCHHHHhhCC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVTLREDEHEKLRKSFGAKSECNNLLLSRS-YSQKIWLVG--KGLTEEEQSKAK 529 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l~~~~~~~~l~~~l~~~~~~~~l~~~~~-~~~~vw~vg--~~~~~~~q~~a~ 529 (633)
++|+|+| =|++|+.||+.|...|.+|++...+....+|..+ -+-+...+.++.. .+.-+..-| +.|+.|+-..+|
T Consensus 24 k~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf~v~~~~~a~~~adi~vtaTG~~~vi~~e~~~~mk 101 (162)
T PF00670_consen 24 KRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGFEVMTLEEALRDADIFVTATGNKDVITGEHFRQMK 101 (162)
T ss_dssp SEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT-EEE-HHHHTTT-SEEEE-SSSSSSB-HHHHHHS-
T ss_pred CEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCcEecCHHHHHhhCCEEEECCCCccccCHHHHHHhc
Confidence 6777776 4899999999999999999996667777888776 2223234455442 233334566 458999999999
Q ss_pred CCceeecccccCCC
Q 006722 530 KGTIFIPFSQFPPN 543 (633)
Q Consensus 530 ~G~~f~~~~~~~~~ 543 (633)
.|++++....++-+
T Consensus 102 dgail~n~Gh~d~E 115 (162)
T PF00670_consen 102 DGAILANAGHFDVE 115 (162)
T ss_dssp TTEEEEESSSSTTS
T ss_pred CCeEEeccCcCcee
Confidence 99999999887766
No 267
>PRK08655 prephenate dehydrogenase; Provisional
Probab=93.61 E-value=0.22 Score=55.68 Aligned_cols=84 Identities=15% Similarity=0.277 Sum_probs=55.2
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEEEEcCcCCH------HHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIWLVGKGLTE------EEQ 525 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw~vg~~~~~------~~q 525 (633)
+|.++|++|.+|+++|+.|.++|.+|.+ |++++.+++.+++|... .....+... +++++++--..+. +-.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-~~~~~e~~~-~aDvVIlavp~~~~~~vl~~l~ 79 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-ANDNIDAAK-DADIVIISVPINVTEDVIKEVA 79 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-ccCHHHHhc-cCCEEEEecCHHHHHHHHHHHH
Confidence 5899999999999999999999999888 88888778888875421 123332221 4455432111111 112
Q ss_pred hhCCCCceeecccc
Q 006722 526 SKAKKGTIFIPFSQ 539 (633)
Q Consensus 526 ~~a~~G~~f~~~~~ 539 (633)
..+++|+++++++-
T Consensus 80 ~~l~~~~iViDvsS 93 (437)
T PRK08655 80 PHVKEGSLLMDVTS 93 (437)
T ss_pred hhCCCCCEEEEccc
Confidence 24578888888885
No 268
>PRK08324 short chain dehydrogenase; Validated
Probab=93.57 E-value=0.1 Score=61.29 Aligned_cols=43 Identities=28% Similarity=0.334 Sum_probs=39.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
+.|+|+||+|.||+++|+.|.++|.+|.+ |+.++.+++.++++
T Consensus 423 k~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~ 467 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG 467 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHh
Confidence 78999999999999999999999999988 89999988888763
No 269
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=93.51 E-value=0.13 Score=52.12 Aligned_cols=45 Identities=24% Similarity=0.321 Sum_probs=39.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCc
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAK 497 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~ 497 (633)
+-+.++|+.++||+|||..|+++|.+|.. ++++.-+.-...||.+
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~ 61 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY 61 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC
Confidence 56789999999999999999999999999 7777778888887553
No 270
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=93.49 E-value=0.1 Score=51.33 Aligned_cols=40 Identities=23% Similarity=0.406 Sum_probs=31.6
Q ss_pred EEEeccCccHHHHHHHHHhhcCcEEEe--cCh-hHHHHHHHHh
Q 006722 455 VVLRGALTKVAYAIAFALCQKGIQVVT--LRE-DEHEKLRKSF 494 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~l 494 (633)
|+++|++|.||+.+|+.|+++|.+|.+ |+. ++.+.+.+++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 43 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL 43 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 579999999999999999999999888 443 4555554443
No 271
>PLN02214 cinnamoyl-CoA reductase
Probab=93.48 E-value=0.2 Score=53.63 Aligned_cols=34 Identities=26% Similarity=0.246 Sum_probs=30.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDE 486 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~ 486 (633)
++|+|+||||-||+++++.|.++|.+|.. |+.++
T Consensus 11 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 67999999999999999999999999987 66554
No 272
>PLN00198 anthocyanidin reductase; Provisional
Probab=93.44 E-value=0.1 Score=55.15 Aligned_cols=40 Identities=25% Similarity=0.291 Sum_probs=32.9
Q ss_pred CCCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHH
Q 006722 449 PKGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHE 488 (633)
Q Consensus 449 ~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~ 488 (633)
|..-++|+++||||-||+.+|+.|.++|.+|.. |+.++..
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~ 47 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQK 47 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHH
Confidence 555578999999999999999999999999854 6654443
No 273
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=93.42 E-value=0.24 Score=49.78 Aligned_cols=142 Identities=15% Similarity=0.121 Sum_probs=88.6
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcc-ccchhhhcccC----cceEEEEcCcCCHHHH-
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKS-ECNNLLLSRSY----SQKIWLVGKGLTEEEQ- 525 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~-~~~~l~~~~~~----~~~vw~vg~~~~~~~q- 525 (633)
+|++.||||++|+.++.-..+||.+|+- ||..+...+|..- ..+ +--.+..+.++ |+.|=.+|.+.+.+++
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~-i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~~~ 80 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVT-ILQKDIFDLTSLASDLAGHDAVISAFGAGASDNDEL 80 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccce-eecccccChhhhHhhhcCCceEEEeccCCCCChhHH
Confidence 6899999999999999999999999998 9998875532220 000 00011111111 3333355555444443
Q ss_pred ----------------------------hhCCCCceeecccccCCCc---------------ccCCCCceeecCcccccC
Q 006722 526 ----------------------------SKAKKGTIFIPFSQFPPND---------------KKIRKDCMYHLTPAMAVP 562 (633)
Q Consensus 526 ----------------------------~~a~~G~~f~~~~~~~~~~---------------~~~R~dc~y~~~~a~~~p 562 (633)
.-+-+|+...|.-.||..- .+-+-|-+|.+-+++-.|
T Consensus 81 ~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~P 160 (211)
T COG2910 81 HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEP 160 (211)
T ss_pred HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCC
Confidence 1134667777777777531 122367889999999999
Q ss_pred Ccccc-cc------ccccCCCcchhhhHhhhhhhhhccCCC
Q 006722 563 AAFEN-VD------SCENWLPRRVMSAWRIGGIVHALEGWN 596 (633)
Q Consensus 563 ~~~~~-~~------~~e~~~p~~~~~Ac~a~~~v~alEgw~ 596 (633)
++=.| ++ -.|-.=..|..+|=-|.+|+-++|.=.
T Consensus 161 GerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~ 201 (211)
T COG2910 161 GERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQ 201 (211)
T ss_pred ccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccc
Confidence 73111 00 122233467888899999999999733
No 274
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=93.37 E-value=0.15 Score=50.61 Aligned_cols=31 Identities=26% Similarity=0.373 Sum_probs=28.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LR 483 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~ 483 (633)
+.|+++|++|.||+++|+.|+++|.+|.+ |+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~ 35 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFS 35 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 47899999999999999999999999988 55
No 275
>PRK07589 ornithine cyclodeaminase; Validated
Probab=93.27 E-value=0.99 Score=49.27 Aligned_cols=140 Identities=12% Similarity=0.038 Sum_probs=82.9
Q ss_pred cCCcEEEecccccccccccCCceEEeeCCC--CcceeecCChhHH-------HHHHhcC-CCCccEEEEeccCccHHHHH
Q 006722 399 KGAKVISLGLMNQGEELNRYGGVFVHKHPQ--LKMKVVDGSSLAV-------AVVINSI-PKGTTQVVLRGALTKVAYAI 468 (633)
Q Consensus 399 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~--L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatgkig~av 468 (633)
.|+|+++.=-=|....+-.--+..+--++. .-+.+.||+.+|+ |+..+-+ +++.+++.++|+ |..|+.-
T Consensus 66 ~gvK~v~~~p~N~~~glP~i~g~v~L~D~~TG~p~Alldg~~lT~~RTaA~sala~~~Lar~da~~l~iiGa-G~QA~~~ 144 (346)
T PRK07589 66 YSFKYVNGHPKNTRRGLQTVMAFGVLADVDTGYPLLLSEMTLLTALRTAATSALAAKYLARPDSRTMALIGN-GAQSEFQ 144 (346)
T ss_pred eEEEEEeeCCCccccCCCceeEEEEEEECCCCCEEEEEcCccHHHHHHHHHHHHHHHHhccCCCcEEEEECC-cHHHHHH
Confidence 577877643223323332222333333332 3388999999974 3344555 678889999885 7888888
Q ss_pred HHHHh--hcCcEEEe--cChhHHHHHHHHhCCcc---cc-chhhhcccCcceEEEEcC-------cCCHHHHhhCCCCce
Q 006722 469 AFALC--QKGIQVVT--LREDEHEKLRKSFGAKS---EC-NNLLLSRSYSQKIWLVGK-------GLTEEEQSKAKKGTI 533 (633)
Q Consensus 469 a~~L~--~~~~~v~l--~~~~~~~~l~~~l~~~~---~~-~~l~~~~~~~~~vw~vg~-------~~~~~~q~~a~~G~~ 533 (633)
++++| ++-.+|.+ |++++.+++.+++.... +. .++.++.. ++||++-=. .++. +|+++|+|
T Consensus 145 l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~-~ADIIvtaT~S~~~~Pvl~~---~~lkpG~h 220 (346)
T PRK07589 145 ALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVE-GADIITTVTADKTNATILTD---DMVEPGMH 220 (346)
T ss_pred HHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHh-cCCEEEEecCCCCCCceecH---HHcCCCcE
Confidence 88887 33556666 99999999998873211 00 22222221 566653211 1233 36999999
Q ss_pred eecccccCCC
Q 006722 534 FIPFSQFPPN 543 (633)
Q Consensus 534 f~~~~~~~~~ 543 (633)
+.-+-..-|.
T Consensus 221 V~aIGs~~p~ 230 (346)
T PRK07589 221 INAVGGDCPG 230 (346)
T ss_pred EEecCCCCCC
Confidence 8887543333
No 276
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=93.26 E-value=0.22 Score=53.37 Aligned_cols=155 Identities=18% Similarity=0.201 Sum_probs=102.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEecChhHHHHHHHHhCCccccchhhhcccCcceEEEE----cCcCCHHHHhhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVTLREDEHEKLRKSFGAKSECNNLLLSRSYSQKIWLV----GKGLTEEEQSKA 528 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw~v----g~~~~~~~q~~a 528 (633)
-+|+|+-+-|+||.-||.+|--.|-+|.+..-|..-.||..+. +-+.-.+.++.+ ..+|.+- -|+|..+.-.++
T Consensus 214 GKv~Vv~GYGdVGKgCaqaLkg~g~~VivTEiDPI~ALQAaMe-G~~V~tm~ea~~-e~difVTtTGc~dii~~~H~~~m 291 (434)
T KOG1370|consen 214 GKVAVVCGYGDVGKGCAQALKGFGARVIVTEIDPICALQAAME-GYEVTTLEEAIR-EVDIFVTTTGCKDIITGEHFDQM 291 (434)
T ss_pred ccEEEEeccCccchhHHHHHhhcCcEEEEeccCchHHHHHHhh-ccEeeeHHHhhh-cCCEEEEccCCcchhhHHHHHhC
Confidence 3555655679999999999999999999977788888988862 112123334332 2233321 256677777889
Q ss_pred CCCceeecccccCCCc--ccCC-------------CCceeecCccccc--CCccccccccccCCCcchhhhHhhhhhhhh
Q 006722 529 KKGTIFIPFSQFPPND--KKIR-------------KDCMYHLTPAMAV--PAAFENVDSCENWLPRRVMSAWRIGGIVHA 591 (633)
Q Consensus 529 ~~G~~f~~~~~~~~~~--~~~R-------------~dc~y~~~~a~~~--p~~~~~~~~~e~~~p~~~~~Ac~a~~~v~a 591 (633)
|.++++|-.-.|+-+- .-+| +....+++-.+.+ -+-+-|+ +|..+.|.=+||-.+.--++.-
T Consensus 292 k~d~IvCN~Ghfd~EiDv~~L~~~~~~~~~vk~QvD~~~~~~gr~iIlLAeGRLvNL-~CatghpSFvmS~sftnQvlAq 370 (434)
T KOG1370|consen 292 KNDAIVCNIGHFDTEIDVKWLNTPALTWENVKPQVDRYILPNGKHIILLAEGRLVNL-GCATGHPSFVMSNSFTNQVLAQ 370 (434)
T ss_pred cCCcEEeccccccceeehhhccCCcceeeecccccceeeccCCcEEEEEecCceeec-ccccCCCceEEecchHHHHHHH
Confidence 9999999887654432 1111 1111222222221 1236778 9999999999999999999999
Q ss_pred ccCCCccc----cCcc-c-ccHHHH
Q 006722 592 LEGWNEHE----CGYA-I-SNIHNV 610 (633)
Q Consensus 592 lEgw~~~e----~G~~-i-~~i~~i 610 (633)
+|=|++.+ +|-- + .++|+-
T Consensus 371 IeLwt~p~~kY~~~V~~LPKklDE~ 395 (434)
T KOG1370|consen 371 IELWTAPEGKYKVGVYVLPKKLDEY 395 (434)
T ss_pred HHHhcCCCCccccceEecchhhHHH
Confidence 99999985 2321 1 677764
No 277
>PRK06823 ornithine cyclodeaminase; Validated
Probab=93.21 E-value=1.1 Score=48.06 Aligned_cols=140 Identities=15% Similarity=0.090 Sum_probs=80.2
Q ss_pred cCCcEEEecccccccccccCCceEEeeCCCC--cceee-cCChhHH-------HHHHhcC-CCCccEEEEeccCccHHHH
Q 006722 399 KGAKVISLGLMNQGEELNRYGGVFVHKHPQL--KMKVV-DGSSLAV-------AVVINSI-PKGTTQVVLRGALTKVAYA 467 (633)
Q Consensus 399 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~L--~irvv-~Gnslta-------avv~~~i-~~~~~~V~~~Gatgkig~a 467 (633)
.|+|+++.--=|....+-.--++.+.-+|.= -..+. ||+.+|+ |+..+-+ +++.+++.++|+ |..|+.
T Consensus 64 ~g~K~v~~~p~N~~~glP~~~g~v~l~d~~TG~p~Ail~d~~~lT~~RTaA~sala~~~La~~d~~~l~iiG~-G~qA~~ 142 (315)
T PRK06823 64 FVVKVSTGFYDNPAQGLPSNQGLMLAFSAKTGEPQALLLDEGWLTALRTALAGRIVARLLAPQHVSAIGIVGT-GIQARM 142 (315)
T ss_pred EEEEEEeecCCCccCCCCCeeEEEEEEECCCCceEEEEcCCChHHHHHHHHHHHHHHHHhcCCCCCEEEEECC-cHHHHH
Confidence 5677766432233222211122333334432 25665 9999975 3334445 678899999984 788999
Q ss_pred HHHHHh--hcCcEEEe--cChhHHHHHHHHhC---Cccc-cchhhhcccCcceEEEE----cCc-CCHHHHhhCCCCcee
Q 006722 468 IAFALC--QKGIQVVT--LREDEHEKLRKSFG---AKSE-CNNLLLSRSYSQKIWLV----GKG-LTEEEQSKAKKGTIF 534 (633)
Q Consensus 468 va~~L~--~~~~~v~l--~~~~~~~~l~~~l~---~~~~-~~~l~~~~~~~~~vw~v----g~~-~~~~~q~~a~~G~~f 534 (633)
-++++| +.-.+|.+ |++++-+++++++. .+-+ .....++. .++||++. .+. ++.+ |++||+++
T Consensus 143 ~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av-~~ADIV~taT~s~~P~~~~~---~l~~G~hi 218 (315)
T PRK06823 143 QLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAEVA-HAANLIVTTTPSREPLLQAE---DIQPGTHI 218 (315)
T ss_pred HHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHHHh-cCCCEEEEecCCCCceeCHH---HcCCCcEE
Confidence 999888 33556666 99999998887761 1111 01122221 15566421 112 2333 68999999
Q ss_pred ecccccCCC
Q 006722 535 IPFSQFPPN 543 (633)
Q Consensus 535 ~~~~~~~~~ 543 (633)
..+.-.-|.
T Consensus 219 ~~iGs~~p~ 227 (315)
T PRK06823 219 TAVGADSPG 227 (315)
T ss_pred EecCCCCcc
Confidence 988644443
No 278
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.15 E-value=0.15 Score=56.48 Aligned_cols=43 Identities=23% Similarity=0.343 Sum_probs=37.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--c--ChhHHHHHHHHhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--L--REDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~--~~~~~~~l~~~l~ 495 (633)
+.|+++|++|.||+++|+.|+++|.+|++ + +.++++++.++++
T Consensus 211 ~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~ 257 (450)
T PRK08261 211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG 257 (450)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC
Confidence 68999999999999999999999999988 3 4567777777763
No 279
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.10 E-value=0.22 Score=52.87 Aligned_cols=166 Identities=18% Similarity=0.180 Sum_probs=103.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKV--ISLG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn 437 (633)
+.+-+.-+..-++.|++.|++. .-|. .++.++++|.|- ++.++.= | +++ .+=|||=
T Consensus 43 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl 122 (284)
T PRK14193 43 DPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGL 122 (284)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCC
Confidence 3444555566778899999986 4454 333347788874 4455431 1 232 2234554
Q ss_pred h----------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhh--cCcEEEe-cChhHHHHHHHH
Q 006722 438 S----------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQ--KGIQVVT-LREDEHEKLRKS 493 (633)
Q Consensus 438 s----------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~--~~~~v~l-~~~~~~~~l~~~ 493 (633)
+ -|+..|++=+.. .-++|+|+|.+.-||+-+|..|.+ +|..|++ .++
T Consensus 123 ~~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~--------- 193 (284)
T PRK14193 123 HPTNLGRLVLNEPAPLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTG--------- 193 (284)
T ss_pred ChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCC---------
Confidence 3 366666654433 348999999999999999999998 7888988 211
Q ss_pred hCCccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCC-cccCCCCce----eecCcccccCCcc
Q 006722 494 FGAKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPN-DKKIRKDCM----YHLTPAMAVPAAF 565 (633)
Q Consensus 494 l~~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~-~~~~R~dc~----y~~~~a~~~p~~~ 565 (633)
+.+|.+.+ ++|..|.++|+ .++++. .++|+++||+. +.+. ..++.-|+- -.-...+.||+.+
T Consensus 194 ------T~~l~~~~k~ADIvV~AvGkp~~i~~~~---ik~GavVIDvG-in~~~~gkl~GDvd~~v~~~a~~iTPVPGGV 263 (284)
T PRK14193 194 ------TRDLAAHTRRADIIVAAAGVAHLVTADM---VKPGAAVLDVG-VSRAGDGKLVGDVHPDVWEVAGAVSPNPGGV 263 (284)
T ss_pred ------CCCHHHHHHhCCEEEEecCCcCccCHHH---cCCCCEEEEcc-ccccCCCcEEeecCHhHHhhCCEEeCCCCCh
Confidence 12444444 44555666775 477766 99999999998 6652 112334444 2223345577764
Q ss_pred c
Q 006722 566 E 566 (633)
Q Consensus 566 ~ 566 (633)
-
T Consensus 264 G 264 (284)
T PRK14193 264 G 264 (284)
T ss_pred h
Confidence 4
No 280
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=93.07 E-value=0.62 Score=49.70 Aligned_cols=133 Identities=11% Similarity=0.024 Sum_probs=80.3
Q ss_pred cCCcEEEecccccccccccCCceEEeeCCC-C-cceeecCChhHH-------HHHHhcCCCCccEEEEeccCccHHHHHH
Q 006722 399 KGAKVISLGLMNQGEELNRYGGVFVHKHPQ-L-KMKVVDGSSLAV-------AVVINSIPKGTTQVVLRGALTKVAYAIA 469 (633)
Q Consensus 399 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-L-~irvv~Gnslta-------avv~~~i~~~~~~V~~~Gatgkig~ava 469 (633)
.|+|+++-+ . + +.. ++.+.-++. = -..+.||+.+|+ |++.+-..++.+.+.++|+ |..|+.-+
T Consensus 62 ~g~K~~~~~---~-~--~~~-g~v~L~d~~TG~p~Almd~~~lT~~RTaA~salaa~~l~~da~~l~iiGa-G~QA~~~~ 133 (301)
T PRK06407 62 AGLKTYIAG---R-N--GAR-FVVLLFDVNNPELVAIFEANRLGQIRTGAVTAYATSILHKNVENFTIIGS-GFQAETQL 133 (301)
T ss_pred eEEEEEecC---C-C--Ccc-EEEEEEECCCCCEEEEEccchHHHHHHHHHHHHHHHHhhcCCcEEEEECC-cHHHHHHH
Confidence 577776642 1 1 122 233433333 2 388999999986 5555666778899999985 78899888
Q ss_pred HHHhh--cCcEEEe--cChhHHHHHHHHhCCc----ccc-chhhhcccCcceEEEE----cCc-CCHHHHhhCCCCceee
Q 006722 470 FALCQ--KGIQVVT--LREDEHEKLRKSFGAK----SEC-NNLLLSRSYSQKIWLV----GKG-LTEEEQSKAKKGTIFI 535 (633)
Q Consensus 470 ~~L~~--~~~~v~l--~~~~~~~~l~~~l~~~----~~~-~~l~~~~~~~~~vw~v----g~~-~~~~~q~~a~~G~~f~ 535 (633)
+++|+ .-.+|.+ |++++-+++.+++... -+- ++..++- .++||++- .+. ++. | |++||+|+.
T Consensus 134 ~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav-~~aDIV~taT~s~~P~~~~-~--~l~pg~hV~ 209 (301)
T PRK06407 134 EGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAAL-RDADTITSITNSDTPIFNR-K--YLGDEYHVN 209 (301)
T ss_pred HHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHH-hcCCEEEEecCCCCcEecH-H--HcCCCceEE
Confidence 88884 3445555 9999999988887210 111 1222222 15566421 122 223 2 688999998
Q ss_pred cccccCCC
Q 006722 536 PFSQFPPN 543 (633)
Q Consensus 536 ~~~~~~~~ 543 (633)
.+--.-|.
T Consensus 210 aiGs~~p~ 217 (301)
T PRK06407 210 LAGSNYPN 217 (301)
T ss_pred ecCCCCCC
Confidence 87543333
No 281
>PLN02778 3,5-epimerase/4-reductase
Probab=93.07 E-value=0.15 Score=53.67 Aligned_cols=48 Identities=13% Similarity=0.125 Sum_probs=36.0
Q ss_pred hcCCCCc-cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 446 NSIPKGT-TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 446 ~~i~~~~-~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+++|++. .+|+|+||||=||+.+++.|.++|.+|+. .+.++.+.++..
T Consensus 2 ~~~~~~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~ 52 (298)
T PLN02778 2 NGTAGSATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEAD 52 (298)
T ss_pred CCCCCCCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHH
Confidence 4566644 68999999999999999999999999975 233333444433
No 282
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.04 E-value=0.37 Score=51.07 Aligned_cols=151 Identities=18% Similarity=0.191 Sum_probs=93.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKVIS--LG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn 437 (633)
+.+-+.-+...++.|++.|++..- |- ++...+++|.|- ++.++.= | +++ .+=|||=
T Consensus 37 d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl 116 (279)
T PRK14178 37 DPASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGF 116 (279)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccC
Confidence 334455556667889999998744 42 334447788875 3555431 1 332 1123332
Q ss_pred ----------------hhHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 438 ----------------SLAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 438 ----------------sltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
.-|++.|++=+.. .-++|.|+|.+.-+|+.+|..|.++|-.|+. ++.
T Consensus 117 ~~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t---------- 186 (279)
T PRK14178 117 HPLNLGRLVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKT---------- 186 (279)
T ss_pred ChhhHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecCh----------
Confidence 2356666554433 2399999999999999999999999999988 222
Q ss_pred CCccccchhhhcc-cCcceEEEEc--CcCCHHHHhhCCCCceeecccccCCCcccCCCCce
Q 006722 495 GAKSECNNLLLSR-SYSQKIWLVG--KGLTEEEQSKAKKGTIFIPFSQFPPNDKKIRKDCM 552 (633)
Q Consensus 495 ~~~~~~~~l~~~~-~~~~~vw~vg--~~~~~~~q~~a~~G~~f~~~~~~~~~~~~~R~dc~ 552 (633)
.+|.+.+ ++|..|..+| +.++++. .++|++++|++ +.....++--|+-
T Consensus 187 ------~~L~~~~~~ADIvI~Avgk~~lv~~~~---vk~GavVIDVg-i~~~~gkl~GDvd 237 (279)
T PRK14178 187 ------ENLKAELRQADILVSAAGKAGFITPDM---VKPGATVIDVG-INQVNGKLCGDVD 237 (279)
T ss_pred ------hHHHHHHhhCCEEEECCCcccccCHHH---cCCCcEEEEee-ccccCCCCcCCcc
Confidence 1333333 3344445556 3466655 89999999999 6652112334443
No 283
>PRK06199 ornithine cyclodeaminase; Validated
Probab=92.99 E-value=0.78 Score=50.61 Aligned_cols=149 Identities=14% Similarity=0.088 Sum_probs=90.4
Q ss_pred cCCcEEEecccccccccccCCceEEeeCCC--CcceeecCChhHH-------HHHHhcC-CCCccEEEEeccCccHHHHH
Q 006722 399 KGAKVISLGLMNQGEELNRYGGVFVHKHPQ--LKMKVVDGSSLAV-------AVVINSI-PKGTTQVVLRGALTKVAYAI 468 (633)
Q Consensus 399 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~--L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatgkig~av 468 (633)
.|+|+++.=-=|....+..--++.+--+|+ .-..+.||+.+|+ |++.+-+ +++.+.+.++|+ |..|+.-
T Consensus 92 ~gvK~v~~~p~N~~~glp~~~g~v~L~D~~TG~p~Ai~dg~~lTa~RTaA~salaa~~LAr~da~~l~iiG~-G~QA~~~ 170 (379)
T PRK06199 92 AGVKWYGSNIANREKGLPRSILMFVLNDADTGAPLAIMSANLLSAYRTGAVPGVGARHLARKDSKVVGLLGP-GVMGKTI 170 (379)
T ss_pred eEEEEeccCCCccccCCCceeEEEEEeeCCCCceEEEEcCcchhhhHHHHHHHHHHHHhccCCCCEEEEECC-cHHHHHH
Confidence 567777643333323333333455444443 3388999999985 4455666 678899999884 7889999
Q ss_pred HHHHhh-c-C-cEEEe--cChhHHHHHHHHhCCcccc---------chhhhcccCcceEEEEcC-----------cCCHH
Q 006722 469 AFALCQ-K-G-IQVVT--LREDEHEKLRKSFGAKSEC---------NNLLLSRSYSQKIWLVGK-----------GLTEE 523 (633)
Q Consensus 469 a~~L~~-~-~-~~v~l--~~~~~~~~l~~~l~~~~~~---------~~l~~~~~~~~~vw~vg~-----------~~~~~ 523 (633)
++++|+ + + .+|.+ |++++.+++.+++ .+.. ....++. .++||++.=. .++.+
T Consensus 171 l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~--~~~~~~~~~v~~~~s~~eav-~~ADIVvtaT~s~~~~~s~~Pv~~~~ 247 (379)
T PRK06199 171 LAAFMAVCPGIDTIKIKGRGQKSLDSFATWV--AETYPQITNVEVVDSIEEVV-RGSDIVTYCNSGETGDPSTYPYVKRE 247 (379)
T ss_pred HHHHHHhcCCccEEEEECCCHHHHHHHHHHH--HHhcCCCceEEEeCCHHHHH-cCCCEEEEccCCCCCCCCcCcEecHH
Confidence 999986 3 3 46666 9999999988887 2221 1111111 1667765322 12333
Q ss_pred HHhhCCCCceeecccc--cCCCcccCCCC-ceeecC
Q 006722 524 EQSKAKKGTIFIPFSQ--FPPNDKKIRKD-CMYHLT 556 (633)
Q Consensus 524 ~q~~a~~G~~f~~~~~--~~~~~~~~R~d-c~y~~~ 556 (633)
|+++|+|+.-... +|+.. +++| ..|-+.
T Consensus 248 ---~lkpG~hv~~ig~~eld~~~--l~~~a~vvvD~ 278 (379)
T PRK06199 248 ---WVKPGAFLLMPAACRIDEGM--EQGDVRKVVDN 278 (379)
T ss_pred ---HcCCCcEEecCCcccCCHHH--HhCCCcEEEcC
Confidence 6999999875432 55554 6553 444443
No 284
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.97 E-value=0.1 Score=51.69 Aligned_cols=29 Identities=31% Similarity=0.384 Sum_probs=27.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+.++++||+|.||+++|+.|+++|.+|++
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~ 34 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQGAQVYG 34 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCCCEEEE
Confidence 57899999999999999999999999988
No 285
>PRK08291 ectoine utilization protein EutC; Validated
Probab=92.89 E-value=0.25 Score=53.13 Aligned_cols=45 Identities=16% Similarity=0.091 Sum_probs=37.6
Q ss_pred CCCccEEEEeccCccHHHHHHHHHhh-cC-cEEEe--cChhHHHHHHHHh
Q 006722 449 PKGTTQVVLRGALTKVAYAIAFALCQ-KG-IQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 449 ~~~~~~V~~~Gatgkig~ava~~L~~-~~-~~v~l--~~~~~~~~l~~~l 494 (633)
+++.++|.++|+ |..|++.+.+|++ ++ .+|.+ |++++.+++.+++
T Consensus 129 ~~~~~~v~IiGa-G~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~ 177 (330)
T PRK08291 129 REDASRAAVIGA-GEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADL 177 (330)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHH
Confidence 567789999998 7789999999985 55 45666 9999999999876
No 286
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.87 E-value=0.92 Score=48.48 Aligned_cols=142 Identities=20% Similarity=0.222 Sum_probs=91.9
Q ss_pred hhHHHHHHHHHHHHHHHcCCcE--EEecccccc-------cccccCC---ceEEeeC-C-CCc----------ceeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKV--ISLGLMNQG-------EELNRYG---GVFVHKH-P-QLK----------MKVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv--~~LG~ln~~-------e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn 437 (633)
..+-+.-+....+.|++.|++. .-|..-.+. +++|.|- ++.++.= | +++ .+=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl 121 (293)
T PRK14185 42 DGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF 121 (293)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCC
Confidence 3444555566778999999998 555543322 5788874 4555431 1 332 1223443
Q ss_pred h----------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhc----CcEEEe-cChhHHHHHH
Q 006722 438 S----------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQK----GIQVVT-LREDEHEKLR 491 (633)
Q Consensus 438 s----------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~----~~~v~l-~~~~~~~~l~ 491 (633)
+ -|++.|++=+.. .-++|+++|.+.=||+-+|..|.++ +..|++ -++
T Consensus 122 ~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~------- 194 (293)
T PRK14185 122 HPINVGRMSIGLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSR------- 194 (293)
T ss_pred CHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCC-------
Confidence 2 267777665543 3399999999999999999999988 678888 111
Q ss_pred HHhCCccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCC
Q 006722 492 KSFGAKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 492 ~~l~~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 542 (633)
+.+|.+.+ ++|..|..+|+ .++++. .++|+++||+. +.+
T Consensus 195 --------T~nl~~~~~~ADIvIsAvGkp~~i~~~~---vk~gavVIDvG-in~ 236 (293)
T PRK14185 195 --------SKNLKKECLEADIIIAALGQPEFVKADM---VKEGAVVIDVG-TTR 236 (293)
T ss_pred --------CCCHHHHHhhCCEEEEccCCcCccCHHH---cCCCCEEEEec-Ccc
Confidence 12444444 44555566665 466654 99999999998 654
No 287
>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1. UEV1 is an enzymatically inactive variant of the E2 ubiquitin-conjugating enzymes that regulate non-canonical elongation of ubiquitin chains, and Kua, an otherwise unknown gene. UEV1A is a nuclear protein, whereas both Kua and Kua-UEV localise to cytoplasmic structures, indicating that the addition of a Kua domain to UEV confers new biological properties. UEV1-Kua carries the B domain with its characteristic double histidine motif, and it is probably this domain which determines the cytoplasmic localisation. It is postulated that this hybrid transcript could preferentially direct the variant polyubiquitination of substrates closely associated with the cytoplasmic face of the endoplasmic reticulum, possibly, although not necessarily, in conjunction with membrane-bound ubiquitin-conjugating enzymes [].
Probab=92.80 E-value=0.2 Score=49.85 Aligned_cols=51 Identities=18% Similarity=0.300 Sum_probs=37.6
Q ss_pred hhcccccceecccc--ccccCCCcccccCCchhHHHhhcC-CCCCccCCCchhhhhcCC
Q 006722 217 NNMGHCNFELMPSC--LLTNFPPLKYLAYTASFHSLHHTQ-FRTNYSLFMPVYDYIYGT 272 (633)
Q Consensus 217 ~~~~Hsg~e~~P~~--~~~~~p~Lk~li~tp~~H~lHH~~-~~~NYG~~f~lWDrLFGT 272 (633)
.-..|.... .|.+ +.++.+ ++.+|..|..||.. +++|||...++|+.+...
T Consensus 102 HkWsH~~~~-~P~~V~~LQ~~g----illsr~~H~~HH~aPh~~~YCI~tGw~N~~Ld~ 155 (178)
T PF10520_consen 102 HKWSHTYKS-LPPWVRFLQDAG----ILLSRKHHRIHHVAPHDTNYCITTGWLNPPLDK 155 (178)
T ss_pred HHHHcCCCC-CCHHHHHHHHCC----cccCchhhhccccCcccCCeEeecccchHHHHH
Confidence 456787655 4643 122223 35699999999999 899999999999998765
No 288
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=92.80 E-value=0.42 Score=52.72 Aligned_cols=85 Identities=16% Similarity=0.277 Sum_probs=58.4
Q ss_pred HHcCCcEEEecccccccccccCCceEEeeCCCCcceeecCChhHHH----------HHHhcCCCCccEEEEeccCccHHH
Q 006722 397 EEKGAKVISLGLMNQGEELNRYGGVFVHKHPQLKMKVVDGSSLAVA----------VVINSIPKGTTQVVLRGALTKVAY 466 (633)
Q Consensus 397 ~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~L~irvv~Gnsltaa----------vv~~~i~~~~~~V~~~Gatgkig~ 466 (633)
.+.|+.|+++- . +|+. + .|+-+.++-.|..+.+. ..+.+.+...++|+++|+ |++|+
T Consensus 178 ~~~~~~vi~i~--r-------~~~~-~--~p~~~~~l~~gD~l~v~g~~~~l~~~~~~~~~~~~~~~~iiIiG~-G~~g~ 244 (453)
T PRK09496 178 PDIDVRVVAIF--R-------GGRL-I--IPRGDTVIEAGDEVYFIGAREHIRAVMSEFGRLEKPVKRVMIVGG-GNIGY 244 (453)
T ss_pred CCCceEEEEEE--E-------CCEE-E--cCCCCcEecCCCEEEEEeCHHHHHHHHHHhCccCCCCCEEEEECC-CHHHH
Confidence 35788888773 2 2231 1 34555555555554332 222222224489999999 99999
Q ss_pred HHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 467 AIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 467 ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
.+++.|.++|.+|++ +++++.++++++.
T Consensus 245 ~l~~~L~~~~~~v~vid~~~~~~~~~~~~~ 274 (453)
T PRK09496 245 YLAKLLEKEGYSVKLIERDPERAEELAEEL 274 (453)
T ss_pred HHHHHHHhCCCeEEEEECCHHHHHHHHHHC
Confidence 999999999999988 8999999998874
No 289
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=92.73 E-value=0.15 Score=51.13 Aligned_cols=36 Identities=36% Similarity=0.504 Sum_probs=30.8
Q ss_pred ccC--ccHHHHHHHHHhhcCcEEEe--cChhH----HHHHHHHh
Q 006722 459 GAL--TKVAYAIAFALCQKGIQVVT--LREDE----HEKLRKSF 494 (633)
Q Consensus 459 Gat--gkig~ava~~L~~~~~~v~l--~~~~~----~~~l~~~l 494 (633)
||+ ++||++||+.|+++|.+|++ |++++ ++++.++.
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~ 44 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEY 44 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHT
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHc
Confidence 666 99999999999999999999 88877 56666665
No 290
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.69 E-value=0.27 Score=52.30 Aligned_cols=152 Identities=22% Similarity=0.282 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCCh-
Q 006722 384 SINRLIEEAILEAEEKGAKVISL--G-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGSS- 438 (633)
Q Consensus 384 ~in~~i~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gns- 438 (633)
+-+.-+...++.|++.|++..-. . .++.++++|.|- ++.++.= | +++ .+=|||=+
T Consensus 45 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~ 124 (285)
T PRK14189 45 ASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHV 124 (285)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCCh
Confidence 44455566677899999987543 2 233347788874 3444431 1 332 23355543
Q ss_pred ---------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEecChhHHHHHHHHhCCcc
Q 006722 439 ---------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVTLREDEHEKLRKSFGAKS 498 (633)
Q Consensus 439 ---------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l~~~~~~~~l~~~l~~~~ 498 (633)
-|+..|++=+.. .-++|+|+|.++-||+-+|..|.++|..|++-+.
T Consensus 125 ~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs-------------- 190 (285)
T PRK14189 125 ANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHS-------------- 190 (285)
T ss_pred hhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecC--------------
Confidence 256666554433 3389999999999999999999999999998110
Q ss_pred ccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCC-cccCCCCcee
Q 006722 499 ECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPN-DKKIRKDCMY 553 (633)
Q Consensus 499 ~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~-~~~~R~dc~y 553 (633)
.+.+|.+.+ ++|..|.++|+ .++++ ++++|+++||+. +.+. ..++--|+-+
T Consensus 191 ~t~~l~~~~~~ADIVV~avG~~~~i~~~---~ik~gavVIDVG-in~~~~gkl~GDVd~ 245 (285)
T PRK14189 191 KTRDLAAHTRQADIVVAAVGKRNVLTAD---MVKPGATVIDVG-MNRDDAGKLCGDVDF 245 (285)
T ss_pred CCCCHHHHhhhCCEEEEcCCCcCccCHH---HcCCCCEEEEcc-ccccCCCCeeCCccH
Confidence 012333333 33555555553 35664 499999999998 6653 1124466553
No 291
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=92.66 E-value=0.37 Score=55.14 Aligned_cols=132 Identities=20% Similarity=0.189 Sum_probs=80.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc-ch----------hhhc-----------c-
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC-NN----------LLLS-----------R- 507 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~-~~----------l~~~-----------~- 507 (633)
++|+|.|+ |-+|.+.+..+...|.+|.. ++.++++..++ +|+.... +. ..+. .
T Consensus 165 akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~ 242 (511)
T TIGR00561 165 AKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFA 242 (511)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHHH
Confidence 79999996 99999999999999988887 88888887765 6554311 10 0000 1
Q ss_pred c--CcceEE-----EEcC----cCCHHHHhhCCCCceeecccccCCCcccCCCCceeecCcccccCC-ccccccccccCC
Q 006722 508 S--YSQKIW-----LVGK----GLTEEEQSKAKKGTIFIPFSQFPPNDKKIRKDCMYHLTPAMAVPA-AFENVDSCENWL 575 (633)
Q Consensus 508 ~--~~~~vw-----~vg~----~~~~~~q~~a~~G~~f~~~~~~~~~~~~~R~dc~y~~~~a~~~p~-~~~~~~~~e~~~ 575 (633)
+ .++||+ +-|+ .+++++.+.+++|.+++|++ .++- .+|-..+-.-+-+.+ .+. +.|--.+
T Consensus 243 e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA-~d~G-----Gn~E~t~p~~~~~~~~GV~--~~gv~nl 314 (511)
T TIGR00561 243 AQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLA-AEQG-----GNCEYTKPGEVYTTENQVK--VIGYTDL 314 (511)
T ss_pred HHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEee-eCCC-----CCEEEecCceEEEecCCEE--EEeeCCc
Confidence 0 145554 2243 38899999999999999999 5543 244333211122222 233 2466667
Q ss_pred Ccch---hhhHhhhhhhhhccC
Q 006722 576 PRRV---MSAWRIGGIVHALEG 594 (633)
Q Consensus 576 p~~~---~~Ac~a~~~v~alEg 594 (633)
|.+. .+--.+..++.-||.
T Consensus 315 Ps~~p~~AS~l~s~nl~~~l~~ 336 (511)
T TIGR00561 315 PSRLPTQSSQLYGTNLVNLLKL 336 (511)
T ss_pred cccCHHHHHHHHHHHHHHHHHH
Confidence 7653 333555556555554
No 292
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=92.62 E-value=0.14 Score=53.41 Aligned_cols=32 Identities=19% Similarity=0.204 Sum_probs=27.2
Q ss_pred EEEEeccCccHHHHHHHHHhhcC--cEEEe--cChh
Q 006722 454 QVVLRGALTKVAYAIAFALCQKG--IQVVT--LRED 485 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~--~~v~l--~~~~ 485 (633)
+|+|+||||.||+.+++.|.++| .+|.. |+.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 48999999999999999999998 56766 6554
No 293
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.55 E-value=0.27 Score=52.49 Aligned_cols=164 Identities=20% Similarity=0.216 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceEEeeC-C-CCcc------------------
Q 006722 384 SINRLIEEAILEAEEKGAKVIS--LG-------LMNQGEELNRYG---GVFVHKH-P-QLKM------------------ 431 (633)
Q Consensus 384 ~in~~i~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~i------------------ 431 (633)
+-+.-+...++.|++.|++.-- |. ++...++||.|- ++.++.= | +++.
T Consensus 45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~ 124 (294)
T PRK14187 45 ASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHN 124 (294)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCh
Confidence 4445556667889999998754 43 233346778884 4555431 1 3321
Q ss_pred ----eeecCC---hh---HHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhC
Q 006722 432 ----KVVDGS---SL---AVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFG 495 (633)
Q Consensus 432 ----rvv~Gn---sl---taavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~ 495 (633)
|+..|+ .+ |++.|++=+.. .-++|+|+|.+.=||+-+|..|.++|-.|++ -++
T Consensus 125 ~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~----------- 193 (294)
T PRK14187 125 ENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSA----------- 193 (294)
T ss_pred hhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCC-----------
Confidence 233443 22 77777665543 3489999999999999999999999999999 111
Q ss_pred Cccccchhhhcc-cCcceEEEEcCc--CCHHHHhhCCCCceeecccccCCCc-c---cCCCCceeec-----CcccccCC
Q 006722 496 AKSECNNLLLSR-SYSQKIWLVGKG--LTEEEQSKAKKGTIFIPFSQFPPND-K---KIRKDCMYHL-----TPAMAVPA 563 (633)
Q Consensus 496 ~~~~~~~l~~~~-~~~~~vw~vg~~--~~~~~q~~a~~G~~f~~~~~~~~~~-~---~~R~dc~y~~-----~~a~~~p~ 563 (633)
+.+|.+.+ ++|..|.++|+- ++++. .++|+++||+- +.+.. . ++.-|+-+.+ ...+.||+
T Consensus 194 ----T~~l~~~~~~ADIvVsAvGkp~~i~~~~---ik~gaiVIDVG-in~~~~~~~~kl~GDvd~e~v~~~a~~iTPVPG 265 (294)
T PRK14187 194 ----TRDLADYCSKADILVAAVGIPNFVKYSW---IKKGAIVIDVG-INSIEEGGVKKFVGDVDFAEVKKKASAITPVPG 265 (294)
T ss_pred ----CCCHHHHHhhCCEEEEccCCcCccCHHH---cCCCCEEEEec-ccccCCCCccceeCCccHHHHhhhccEecCCCC
Confidence 12344444 446666788875 78776 99999999996 54421 0 2445665332 22244676
Q ss_pred ccc
Q 006722 564 AFE 566 (633)
Q Consensus 564 ~~~ 566 (633)
.+-
T Consensus 266 GVG 268 (294)
T PRK14187 266 GVG 268 (294)
T ss_pred CCh
Confidence 543
No 294
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=92.54 E-value=0.14 Score=51.15 Aligned_cols=29 Identities=31% Similarity=0.563 Sum_probs=27.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+.++++||+|.||+++|+.|+++|.+|++
T Consensus 9 k~vlItGas~~iG~~la~~l~~~G~~v~~ 37 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEAGAKVIG 37 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEE
Confidence 68999999999999999999999999988
No 295
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=92.51 E-value=0.45 Score=46.48 Aligned_cols=82 Identities=21% Similarity=0.227 Sum_probs=54.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEE--EE------cCcCCH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIW--LV------GKGLTE 522 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw--~v------g~~~~~ 522 (633)
++|.++|. |.||+++|+.|..-|.+|.. |+.+.-+.. .+.+. ....+.+..+ .+|++ .+ -..|+.
T Consensus 37 ~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~--~~~~l~ell~-~aDiv~~~~plt~~T~~li~~ 111 (178)
T PF02826_consen 37 KTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGV--EYVSLDELLA-QADIVSLHLPLTPETRGLINA 111 (178)
T ss_dssp SEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTE--EESSHHHHHH-H-SEEEE-SSSSTTTTTSBSH
T ss_pred CEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhc-ccccc--eeeehhhhcc-hhhhhhhhhccccccceeeee
Confidence 78888875 99999999999988999999 444433312 22222 2234444431 23343 22 256778
Q ss_pred HHHhhCCCCceeecccc
Q 006722 523 EEQSKAKKGTIFIPFSQ 539 (633)
Q Consensus 523 ~~q~~a~~G~~f~~~~~ 539 (633)
++-.++|+|++|+-++|
T Consensus 112 ~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 112 EFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp HHHHTSTTTEEEEESSS
T ss_pred eeeeccccceEEEeccc
Confidence 88899999999999998
No 296
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.48 E-value=0.31 Score=51.86 Aligned_cols=143 Identities=20% Similarity=0.218 Sum_probs=92.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKVISL--G-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn 437 (633)
..+-+.-+..-++.|++.|+++.-. - +++..++||.|- ++.++.= | +++ .+=|||=
T Consensus 40 d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl 119 (287)
T PRK14173 40 DPASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGF 119 (287)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccc
Confidence 3344555566677899999987543 3 233347788874 4555431 1 332 2235554
Q ss_pred h----------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEecChhHHHHHHHHhCC
Q 006722 438 S----------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVTLREDEHEKLRKSFGA 496 (633)
Q Consensus 438 s----------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l~~~~~~~~l~~~l~~ 496 (633)
+ -|+..|++=+.. .-++|+|+|.+.-||+-+|..|.++|-.|++-+
T Consensus 120 ~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtich------------- 186 (287)
T PRK14173 120 HPLNVGRLWMGGEALEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAH------------- 186 (287)
T ss_pred ChhhhHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeC-------------
Confidence 3 256666655543 338999999999999999999999999999811
Q ss_pred ccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCC
Q 006722 497 KSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 497 ~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 542 (633)
..+.+|.+.+ ++|..|..+|+ -++++. .++|+++||+. +.+
T Consensus 187 -s~T~~l~~~~~~ADIvIsAvGkp~~i~~~~---vk~GavVIDVG-in~ 230 (287)
T PRK14173 187 -SKTQDLPAVTRRADVLVVAVGRPHLITPEM---VRPGAVVVDVG-INR 230 (287)
T ss_pred -CCCCCHHHHHhhCCEEEEecCCcCccCHHH---cCCCCEEEEcc-Ccc
Confidence 1112344443 44555666775 466655 99999999998 555
No 297
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=92.24 E-value=0.36 Score=50.47 Aligned_cols=85 Identities=20% Similarity=0.307 Sum_probs=55.9
Q ss_pred EEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEE--EEcCc--CCH----HH
Q 006722 455 VVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIW--LVGKG--LTE----EE 524 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw--~vg~~--~~~----~~ 524 (633)
|.++| +|.+|+++|+.|++.|.+|++ |++++.+.+++. |.... ....++.+ +++++ .+-+. +.. ++
T Consensus 2 IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~~-~~~~~~~~-~aDivi~~vp~~~~~~~v~~~~~ 77 (291)
T TIGR01505 2 VGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAA-GAVTA-ETARQVTE-QADVIFTMVPDSPQVEEVAFGEN 77 (291)
T ss_pred EEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCccc-CCHHHHHh-cCCEEEEecCCHHHHHHHHcCcc
Confidence 66777 599999999999999999998 899998888765 33221 22223221 34443 33221 110 01
Q ss_pred --HhhCCCCceeecccccCCC
Q 006722 525 --QSKAKKGTIFIPFSQFPPN 543 (633)
Q Consensus 525 --q~~a~~G~~f~~~~~~~~~ 543 (633)
...+++|+++++.|.++|.
T Consensus 78 ~~~~~~~~g~iivd~st~~~~ 98 (291)
T TIGR01505 78 GIIEGAKPGKTLVDMSSISPI 98 (291)
T ss_pred hHhhcCCCCCEEEECCCCCHH
Confidence 1246899999999988875
No 298
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.24 E-value=0.2 Score=51.45 Aligned_cols=44 Identities=25% Similarity=0.434 Sum_probs=39.2
Q ss_pred ccEEEEeccC-ccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 452 TTQVVLRGAL-TKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 452 ~~~V~~~Gat-gkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
.+.|+++|.+ |+||.|+|+-+.|+|.+|.- |+.|+..+|..+.|
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~g 53 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFG 53 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhC
Confidence 4788999988 99999999999999999998 99999999886653
No 299
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.24 E-value=0.25 Score=50.13 Aligned_cols=29 Identities=21% Similarity=0.297 Sum_probs=26.9
Q ss_pred cEEEEeccC--ccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGAL--TKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gat--gkig~ava~~L~~~~~~v~l 481 (633)
+.|+++||| ++||+++|+.|+++|.+|.+
T Consensus 7 k~vlVtGas~~~giG~~~a~~l~~~G~~vi~ 37 (256)
T PRK12859 7 KVAVVTGVSRLDGIGAAICKELAEAGADIFF 37 (256)
T ss_pred cEEEEECCCCCCChHHHHHHHHHHCCCeEEE
Confidence 689999999 49999999999999999987
No 300
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=92.18 E-value=0.5 Score=49.90 Aligned_cols=108 Identities=17% Similarity=0.138 Sum_probs=69.5
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcc-cC-cceEE--EEcCc--CC---H
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSR-SY-SQKIW--LVGKG--LT---E 522 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~-~~-~~~vw--~vg~~--~~---~ 522 (633)
+|-++| .|.+|+++|+.|.++|.+|+. |++++.+.+++. |.... ....++. .. .++++ .+-+. +. +
T Consensus 2 ~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~~-~s~~~~~~~~~~advVi~~vp~~~~~~~v~~ 78 (299)
T PRK12490 2 KLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKL-GITAR-HSLEELVSKLEAPRTIWVMVPAGEVTESVIK 78 (299)
T ss_pred EEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-CCeec-CCHHHHHHhCCCCCEEEEEecCchHHHHHHH
Confidence 467787 799999999999999999988 888999988654 43221 2333332 11 23443 33221 11 1
Q ss_pred HHHhhCCCCceeecccccCCCccc-----C-CCCceeecCcccccCCc
Q 006722 523 EEQSKAKKGTIFIPFSQFPPNDKK-----I-RKDCMYHLTPAMAVPAA 564 (633)
Q Consensus 523 ~~q~~a~~G~~f~~~~~~~~~~~~-----~-R~dc~y~~~~a~~~p~~ 564 (633)
+-...+++|.++++.|.++|...+ + ++.+.|.+-|.+--|..
T Consensus 79 ~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vdapV~G~~~~ 126 (299)
T PRK12490 79 DLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVDCGTSGGVWG 126 (299)
T ss_pred HHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEeCCCCCCHHH
Confidence 112236799999999988775411 1 25788998888766543
No 301
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=92.17 E-value=0.28 Score=48.33 Aligned_cols=40 Identities=25% Similarity=0.344 Sum_probs=34.6
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+|.|+|| |-+|+.||..+++.|.+|++ ++++.+++.++++
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i 42 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRI 42 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHH
Confidence 5899999 99999999999999999999 8888887766665
No 302
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.12 E-value=0.41 Score=50.84 Aligned_cols=165 Identities=18% Similarity=0.196 Sum_probs=101.1
Q ss_pred hHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceEEeeC-C-CCc----------c-------
Q 006722 383 ESINRLIEEAILEAEEKGAKVISL--G-------LMNQGEELNRYG---GVFVHKH-P-QLK----------M------- 431 (633)
Q Consensus 383 ~~in~~i~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------i------- 431 (633)
.+-+.-+..-++.|++.|++.--. . +++.++++|.|- ++.++.= | +++ .
T Consensus 43 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~ 122 (282)
T PRK14180 43 PASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFH 122 (282)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCccccccccC
Confidence 344445555667899999987543 3 233347788884 3444431 1 222 1
Q ss_pred -----eeecCC-----hhHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhC
Q 006722 432 -----KVVDGS-----SLAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFG 495 (633)
Q Consensus 432 -----rvv~Gn-----sltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~ 495 (633)
|+..|+ .-|+..|++=++. .-++|+++|.+.=||+-+|..|.++|..|++ .++
T Consensus 123 ~~n~g~l~~g~~~~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~----------- 191 (282)
T PRK14180 123 PTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF----------- 191 (282)
T ss_pred hhhHHHHhcCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCC-----------
Confidence 222332 3456666554443 3389999999999999999999999999999 111
Q ss_pred Cccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCCcccCCCCceeec-----CcccccCCccc
Q 006722 496 AKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPNDKKIRKDCMYHL-----TPAMAVPAAFE 566 (633)
Q Consensus 496 ~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~~~~~R~dc~y~~-----~~a~~~p~~~~ 566 (633)
+.+|.+.+ ++|..|.++|+ .++++. .++|++++|+. +.....++.-|+-+.. ....-||+.+-
T Consensus 192 ----T~dl~~~~k~ADIvIsAvGkp~~i~~~~---vk~gavVIDvG-in~~~gkl~GDvd~~~v~~~a~~iTPVPGGVG 262 (282)
T PRK14180 192 ----TTDLKSHTTKADILIVAVGKPNFITADM---VKEGAVVIDVG-INHVDGKIVGDVDFAAVKDKVAAITPVPGGVG 262 (282)
T ss_pred ----CCCHHHHhhhcCEEEEccCCcCcCCHHH---cCCCcEEEEec-ccccCCceeCCcCHHHHHhhccEeccCCCChh
Confidence 12344333 34555566765 467765 99999999998 6552123556665332 12344676543
No 303
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.10 E-value=0.25 Score=49.85 Aligned_cols=29 Identities=24% Similarity=0.364 Sum_probs=27.0
Q ss_pred cEEEEeccC--ccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGAL--TKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gat--gkig~ava~~L~~~~~~v~l 481 (633)
+.|+++||| |+||+++|+.|.++|.+|++
T Consensus 6 k~vlItGas~~~giG~~la~~l~~~G~~vi~ 36 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFF 36 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEE
Confidence 679999999 48999999999999999988
No 304
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=91.99 E-value=0.14 Score=54.24 Aligned_cols=66 Identities=17% Similarity=0.194 Sum_probs=44.3
Q ss_pred EEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc-chhhhcccCcceEE--EEcCcCCHH
Q 006722 455 VVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC-NNLLLSRSYSQKIW--LVGKGLTEE 523 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~-~~l~~~~~~~~~vw--~vg~~~~~~ 523 (633)
|+++|+||=||++++..|++.|-+|++ |+..+-+..... .... +.+.+...-++|+| ++|+.|-.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~---~v~~~~~~~~~~~~~~DavINLAG~~I~~r 71 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP---NVTLWEGLADALTLGIDAVINLAGEPIAER 71 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc---cccccchhhhcccCCCCEEEECCCCccccc
Confidence 579999999999999999999999999 777664432111 1111 22333332146665 788887766
No 305
>PRK08309 short chain dehydrogenase; Provisional
Probab=91.91 E-value=0.3 Score=48.12 Aligned_cols=40 Identities=23% Similarity=0.423 Sum_probs=33.8
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
.|+++|+|| +|.++++.|+++|.+|.+ |++++.+.++.++
T Consensus 2 ~vlVtGGtG-~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l 43 (177)
T PRK08309 2 HALVIGGTG-MLKRVSLWLCEKGFHVSVIARREVKLENVKRES 43 (177)
T ss_pred EEEEECcCH-HHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHh
Confidence 589999995 556699999999999988 8888888887765
No 306
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.83 E-value=0.41 Score=50.92 Aligned_cols=153 Identities=20% Similarity=0.219 Sum_probs=96.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKVIS--LG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn 437 (633)
+.+-+.-+....+.|++.|++..- |. +++.++++|.|- ++.++.= | +++ .+=|||=
T Consensus 43 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl 122 (284)
T PRK14190 43 DPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGF 122 (284)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccccccc
Confidence 334455556677889999998754 44 334447888885 3455431 1 332 1223443
Q ss_pred ----------------hhHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhC
Q 006722 438 ----------------SLAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFG 495 (633)
Q Consensus 438 ----------------sltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~ 495 (633)
.-|+..|++=+.. .-++|+|+|.+.=||+-+|..|.++|-.|++ .++.
T Consensus 123 ~~~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t---------- 192 (284)
T PRK14190 123 HPINVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT---------- 192 (284)
T ss_pred CHhhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc----------
Confidence 2366666654432 3389999999999999999999999999998 2111
Q ss_pred Cccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCC-cccCCCCcee
Q 006722 496 AKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPN-DKKIRKDCMY 553 (633)
Q Consensus 496 ~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~-~~~~R~dc~y 553 (633)
.+|.+.+ ++|..|.++|+ .++++. .++|+++||+. +++. ..++--|+-+
T Consensus 193 -----~~l~~~~~~ADIvI~AvG~p~~i~~~~---ik~gavVIDvG-i~~~~~gkl~GDvd~ 245 (284)
T PRK14190 193 -----KNLAELTKQADILIVAVGKPKLITADM---VKEGAVVIDVG-VNRLENGKLCGDVDF 245 (284)
T ss_pred -----hhHHHHHHhCCEEEEecCCCCcCCHHH---cCCCCEEEEee-ccccCCCCeeccCcH
Confidence 2333333 33555555664 467766 89999999998 6652 1124566653
No 307
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=91.81 E-value=0.19 Score=54.60 Aligned_cols=29 Identities=24% Similarity=0.268 Sum_probs=28.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
++|+|+||||-||+++|+.|.++|.+|+.
T Consensus 22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~ 50 (370)
T PLN02695 22 LRICITGAGGFIASHIARRLKAEGHYIIA 50 (370)
T ss_pred CEEEEECCccHHHHHHHHHHHhCCCEEEE
Confidence 78999999999999999999999999987
No 308
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=91.79 E-value=0.3 Score=49.22 Aligned_cols=40 Identities=13% Similarity=0.256 Sum_probs=36.4
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+|.++|++|.+|+++|+.|+++|.+|++ |++++.++++++
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 5889999999999999999999999988 899999888775
No 309
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.79 E-value=0.39 Score=51.15 Aligned_cols=165 Identities=19% Similarity=0.205 Sum_probs=102.7
Q ss_pred hHHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceEEeeC-C-CCc----------c-------
Q 006722 383 ESINRLIEEAILEAEEKGAKVISLG---------LMNQGEELNRYG---GVFVHKH-P-QLK----------M------- 431 (633)
Q Consensus 383 ~~in~~i~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p-~L~----------i------- 431 (633)
.+-+.-++.-++.|++.|++..-.= +++.+++||.|- ++.++.= | +++ .
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~ 123 (288)
T PRK14171 44 PASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFH 123 (288)
T ss_pred ccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCC
Confidence 3444455566788999999875432 344447788874 4444431 1 221 1
Q ss_pred -----eeecCC-----hhHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhC
Q 006722 432 -----KVVDGS-----SLAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFG 495 (633)
Q Consensus 432 -----rvv~Gn-----sltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~ 495 (633)
|+..|+ .-|++.|++=+.. .-++|+++|.+.=||+-+|..|.++|-.|++ .++
T Consensus 124 ~~N~g~l~~g~~~~~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~----------- 192 (288)
T PRK14171 124 PLNVGYLHSGISQGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSK----------- 192 (288)
T ss_pred ccchhhhhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC-----------
Confidence 233343 3466666654433 3389999999999999999999999999998 211
Q ss_pred Cccccchhhhcc-cCcceEEEEcCc--CCHHHHhhCCCCceeecccccCCC-cccCCCCceeec-----CcccccCCccc
Q 006722 496 AKSECNNLLLSR-SYSQKIWLVGKG--LTEEEQSKAKKGTIFIPFSQFPPN-DKKIRKDCMYHL-----TPAMAVPAAFE 566 (633)
Q Consensus 496 ~~~~~~~l~~~~-~~~~~vw~vg~~--~~~~~q~~a~~G~~f~~~~~~~~~-~~~~R~dc~y~~-----~~a~~~p~~~~ 566 (633)
+.+|.+.+ ++|..|..+|+- ++++. .++|+++||+. +... ..++.-|+-+.. ....-||+.+-
T Consensus 193 ----T~~L~~~~~~ADIvV~AvGkp~~i~~~~---vk~GavVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iTPVPGGVG 264 (288)
T PRK14171 193 ----THNLSSITSKADIVVAAIGSPLKLTAEY---FNPESIVIDVG-INRISGNKIIGDVDFENVKSKVKYITPVPGGIG 264 (288)
T ss_pred ----CCCHHHHHhhCCEEEEccCCCCccCHHH---cCCCCEEEEee-ccccCCCCeECCccHHHHHhhceEeCCCCCCcH
Confidence 12445444 445556677753 67666 99999999998 6653 112556665332 22245677544
No 310
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=91.78 E-value=0.49 Score=40.81 Aligned_cols=41 Identities=20% Similarity=0.327 Sum_probs=36.1
Q ss_pred EEEEeccCccHHHHHHHHHhhcC---cEEEe---cChhHHHHHHHHhC
Q 006722 454 QVVLRGALTKVAYAIAFALCQKG---IQVVT---LREDEHEKLRKSFG 495 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~---~~v~l---~~~~~~~~l~~~l~ 495 (633)
+|.++ ++|++|.|+++.|.+.| .+|.+ |++|+.++++++.+
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~ 47 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG 47 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence 35666 67999999999999999 89985 99999999999974
No 311
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=91.69 E-value=0.5 Score=48.33 Aligned_cols=112 Identities=18% Similarity=0.246 Sum_probs=62.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcE---EEe--cC----hhHH-------HHHHHHhCCccccchhhhcccCcceEEEE
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQ---VVT--LR----EDEH-------EKLRKSFGAKSECNNLLLSRSYSQKIWLV 516 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~---v~l--~~----~~~~-------~~l~~~l~~~~~~~~l~~~~~~~~~vw~v 516 (633)
.+|++.|| |+.|++||..|++.|++ +.+ |+ ++|- +++.++.+.......|.++.+ +++++|-
T Consensus 26 ~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~~~~l~~~l~-~~dvlIg 103 (226)
T cd05311 26 VKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKTGGTLKEALK-GADVFIG 103 (226)
T ss_pred CEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCcccCCHHHHHh-cCCEEEe
Confidence 68999999 99999999999999885 777 55 3442 445444321111113333332 3455321
Q ss_pred ---cCcCCHHHHhhCCCCceeecccccCCCc---cc-CCCCc-eeecCcccccCCccccc
Q 006722 517 ---GKGLTEEEQSKAKKGTIFIPFSQFPPND---KK-IRKDC-MYHLTPAMAVPAAFENV 568 (633)
Q Consensus 517 ---g~~~~~~~q~~a~~G~~f~~~~~~~~~~---~~-~R~dc-~y~~~~a~~~p~~~~~~ 568 (633)
.--++++.-+.+.++.++.|.+ -|... .+ .+..| ++.++..| +|.--+|+
T Consensus 104 aT~~G~~~~~~l~~m~~~~ivf~ls-nP~~e~~~~~A~~~ga~i~a~G~~~-~~~Q~nn~ 161 (226)
T cd05311 104 VSRPGVVKKEMIKKMAKDPIVFALA-NPVPEIWPEEAKEAGADIVATGRSD-FPNQVNNV 161 (226)
T ss_pred CCCCCCCCHHHHHhhCCCCEEEEeC-CCCCcCCHHHHHHcCCcEEEeCCCC-Ccccccee
Confidence 1235566666666776666887 33221 11 12457 36666444 55555555
No 312
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=91.67 E-value=0.47 Score=50.09 Aligned_cols=59 Identities=20% Similarity=0.217 Sum_probs=45.2
Q ss_pred hHHHHHHhcC--CCCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCc
Q 006722 439 LAVAVVINSI--PKGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAK 497 (633)
Q Consensus 439 ltaavv~~~i--~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~ 497 (633)
+||+..+... .+.-..|++.||+|.||.++++.+..+|.+|.. +++++.+.+++++|+.
T Consensus 137 ~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~ 199 (338)
T cd08295 137 LTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFD 199 (338)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCc
Confidence 4555555332 123378999999999999999988888999876 8899999998877663
No 313
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=91.67 E-value=0.8 Score=48.40 Aligned_cols=104 Identities=19% Similarity=0.189 Sum_probs=66.0
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc--chhhhcccCcceEE--EEcCc-CCH---H
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC--NNLLLSRSYSQKIW--LVGKG-LTE---E 523 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~--~~l~~~~~~~~~vw--~vg~~-~~~---~ 523 (633)
+|.++| .|.+|+++|+.|.++|.+|.+ |++++.++++++ |..... ..+++... +++++ .+-+. +++ +
T Consensus 2 ~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~-g~~~~~s~~~~~~~~~-~~dvIi~~vp~~~~~~v~~~ 78 (298)
T TIGR00872 2 QLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKED-RTTGVANLRELSQRLS-APRVVWVMVPHGIVDAVLEE 78 (298)
T ss_pred EEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-CCcccCCHHHHHhhcC-CCCEEEEEcCchHHHHHHHH
Confidence 578888 599999999999999999998 999999999876 222221 23333321 34443 22221 111 1
Q ss_pred HHhhCCCCceeecccccCCCcccC------CCCceeecCcccc
Q 006722 524 EQSKAKKGTIFIPFSQFPPNDKKI------RKDCMYHLTPAMA 560 (633)
Q Consensus 524 ~q~~a~~G~~f~~~~~~~~~~~~~------R~dc~y~~~~a~~ 560 (633)
-...+++|.++++.+-..|..... ++.+.|.+.|++-
T Consensus 79 l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vda~vsG 121 (298)
T TIGR00872 79 LAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLDCGTSG 121 (298)
T ss_pred HHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEecCCCC
Confidence 122468999999998765543222 1456677777654
No 314
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=91.67 E-value=0.17 Score=46.53 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=27.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCc-EEEe--cChhH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGI-QVVT--LREDE 486 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~-~v~l--~~~~~ 486 (633)
+.++++||+|.||+++++.|+++|. .|.+ |++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~ 37 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPD 37 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCC
Confidence 4689999999999999999999986 5655 55443
No 315
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.63 E-value=0.54 Score=50.09 Aligned_cols=150 Identities=17% Similarity=0.203 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCCh--
Q 006722 385 INRLIEEAILEAEEKGAKVI--SLG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGSS-- 438 (633)
Q Consensus 385 in~~i~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gns-- 438 (633)
-+.-+..-.+.|++.|++.. -|. +++.+++||.|- ++.++.= | +++ .+=|||=+
T Consensus 52 S~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~ 131 (287)
T PRK14176 52 SKMYVRLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPY 131 (287)
T ss_pred hHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChh
Confidence 34444556678999998764 443 344457788774 4455431 1 332 12245443
Q ss_pred --------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEecChhHHHHHHHHhCCccc
Q 006722 439 --------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVTLREDEHEKLRKSFGAKSE 499 (633)
Q Consensus 439 --------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l~~~~~~~~l~~~l~~~~~ 499 (633)
-|++.|++-+.. .-++|+|+|.+.=||+-+|..|.++|-.|++-+ ..
T Consensus 132 N~g~l~~g~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~h--------------s~ 197 (287)
T PRK14176 132 NMGKLMIGDEGLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCH--------------VF 197 (287)
T ss_pred hhhhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEe--------------cc
Confidence 266666655543 338999999999999999999999999999911 01
Q ss_pred cchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCCcccCCCCce
Q 006722 500 CNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPNDKKIRKDCM 552 (633)
Q Consensus 500 ~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~~~~~R~dc~ 552 (633)
+.+|.+.+ ++|..|.++|+ .++++ +.++|++++|+. +.....++.-||-
T Consensus 198 T~~l~~~~~~ADIvv~AvG~p~~i~~~---~vk~gavVIDvG-in~~~gkl~GDvd 249 (287)
T PRK14176 198 TDDLKKYTLDADILVVATGVKHLIKAD---MVKEGAVIFDVG-ITKEEDKVYGDVD 249 (287)
T ss_pred CCCHHHHHhhCCEEEEccCCccccCHH---HcCCCcEEEEec-ccccCCCccCCcC
Confidence 12334333 33444445564 45555 599999999998 5432112444543
No 316
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=91.59 E-value=0.51 Score=49.28 Aligned_cols=86 Identities=16% Similarity=0.193 Sum_probs=52.5
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc-chhhhcccCcceEEEEcCcCC------HHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC-NNLLLSRSYSQKIWLVGKGLT------EEE 524 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~-~~l~~~~~~~~~vw~vg~~~~------~~~ 524 (633)
+|.++| +|.+|.++|+.|.++|.+|.. ++++..++++++ |..... .....+. +++++++--..+ ++=
T Consensus 2 ~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~-g~~~~~~~~~~~~~--~aDlVilavp~~~~~~~~~~l 77 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIER-GLVDEASTDLSLLK--DCDLVILALPIGLLLPPSEQL 77 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CCcccccCCHhHhc--CCCEEEEcCCHHHHHHHHHHH
Confidence 578898 799999999999999999988 888888887765 332222 1221222 455543311111 111
Q ss_pred HhhCCCCceeecccccCCC
Q 006722 525 QSKAKKGTIFIPFSQFPPN 543 (633)
Q Consensus 525 q~~a~~G~~f~~~~~~~~~ 543 (633)
...+++|+++++++-+++.
T Consensus 78 ~~~l~~~~ii~d~~Svk~~ 96 (279)
T PRK07417 78 IPALPPEAIVTDVGSVKAP 96 (279)
T ss_pred HHhCCCCcEEEeCcchHHH
Confidence 1235667777777665543
No 317
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=91.57 E-value=0.19 Score=49.87 Aligned_cols=28 Identities=14% Similarity=0.245 Sum_probs=24.8
Q ss_pred EEEEeccCccHHHHHHHHHhhc--CcEEEe
Q 006722 454 QVVLRGALTKVAYAIAFALCQK--GIQVVT 481 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~--~~~v~l 481 (633)
+|+++||+|+||+++|+.|+++ ++++..
T Consensus 2 ~vlItGas~gIG~~ia~~l~~~~~~~~v~~ 31 (235)
T PRK09009 2 NILIVGGSGGIGKAMVKQLLERYPDATVHA 31 (235)
T ss_pred EEEEECCCChHHHHHHHHHHHhCCCCEEEE
Confidence 6899999999999999999998 466665
No 318
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=91.55 E-value=0.27 Score=50.80 Aligned_cols=41 Identities=24% Similarity=0.345 Sum_probs=33.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe-----cChhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT-----LREDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l-----~~~~~~~~l~~~ 493 (633)
+.|+++|+.|+||++.+..|.+||++++. .|.|...+||+.
T Consensus 6 Kna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai 51 (261)
T KOG4169|consen 6 KNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAI 51 (261)
T ss_pred ceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhcc
Confidence 67899999999999999999999999988 344444555555
No 319
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=91.49 E-value=0.76 Score=47.09 Aligned_cols=87 Identities=17% Similarity=0.112 Sum_probs=56.4
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEEE--EcCcCCHHHHhh
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIWL--VGKGLTEEEQSK 527 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw~--vg~~~~~~~q~~ 527 (633)
-..|++.|++|.+|.++++.+..+|.++.. +++++.+.+++ +|+........+.+....++++ +|....++-=+.
T Consensus 133 ~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~ 211 (305)
T cd08270 133 GRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAAEVVVGGSELSGAPVDLVVDSVGGPQLARALEL 211 (305)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEeccccccCCCceEEEECCCcHHHHHHHHH
Confidence 479999999999999999999888999877 78888888876 7654221110111211344542 222222333345
Q ss_pred CCCCceeecccc
Q 006722 528 AKKGTIFIPFSQ 539 (633)
Q Consensus 528 a~~G~~f~~~~~ 539 (633)
+++|-+++.+..
T Consensus 212 l~~~G~~v~~g~ 223 (305)
T cd08270 212 LAPGGTVVSVGS 223 (305)
T ss_pred hcCCCEEEEEec
Confidence 777777887763
No 320
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.47 E-value=0.32 Score=51.68 Aligned_cols=165 Identities=21% Similarity=0.223 Sum_probs=100.2
Q ss_pred hHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCCh
Q 006722 383 ESINRLIEEAILEAEEKGAKVI--SLG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGSS 438 (633)
Q Consensus 383 ~~in~~i~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gns 438 (633)
.+-+.-+...++.|++.|++.. -|. +++.+++||.|- ++.++.= | +++ .+=|||=|
T Consensus 44 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~ 123 (284)
T PRK14179 44 PASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFH 123 (284)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccC
Confidence 3444555566778999999865 344 233336788874 4444431 1 332 12244433
Q ss_pred ----------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhCC
Q 006722 439 ----------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFGA 496 (633)
Q Consensus 439 ----------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~~ 496 (633)
-|++.|++=+.. .-++|.++|.+|=+|+.+|..|.++|..|++ .++.
T Consensus 124 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t----------- 192 (284)
T PRK14179 124 PMNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRT----------- 192 (284)
T ss_pred HhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCC-----------
Confidence 366666665543 3389999999999999999999999999999 2111
Q ss_pred ccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCC-cccCCCCceeec-----CcccccCCccc
Q 006722 497 KSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPN-DKKIRKDCMYHL-----TPAMAVPAAFE 566 (633)
Q Consensus 497 ~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~-~~~~R~dc~y~~-----~~a~~~p~~~~ 566 (633)
.++.+.+ .+|..|..+|+ .++++ ++++|+++||++ +.+. ..++.-|+-+.+ ...+-||+.+-
T Consensus 193 ----~~l~~~~~~ADIVI~avg~~~~v~~~---~ik~GavVIDvg-in~~~~gkl~GDVdf~~v~~~a~~iTPVPGGVG 263 (284)
T PRK14179 193 ----RNLAEVARKADILVVAIGRGHFVTKE---FVKEGAVVIDVG-MNRDENGKLIGDVDFDEVAEVASYITPVPGGVG 263 (284)
T ss_pred ----CCHHHHHhhCCEEEEecCccccCCHH---HccCCcEEEEec-ceecCCCCeecCccHHHHHhhccEecCCCCCch
Confidence 2334333 33554555554 35544 499999999998 6653 122446665432 22244666544
No 321
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.43 E-value=0.45 Score=50.59 Aligned_cols=152 Identities=23% Similarity=0.255 Sum_probs=98.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKVIS--LG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn 437 (633)
..+-+.-+...++.|++.|++..- |. +++.+++||.|- ++.++.= | +++ .+=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl 121 (284)
T PRK14170 42 NQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGF 121 (284)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccC
Confidence 344455556677889999998754 44 334447788874 3555431 1 332 2234554
Q ss_pred h----------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhC
Q 006722 438 S----------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFG 495 (633)
Q Consensus 438 s----------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~ 495 (633)
| -|++.|++=+.. .-++|+++|.+.=||+-+|..|.++|..|++ .++
T Consensus 122 ~p~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~----------- 190 (284)
T PRK14170 122 HPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSR----------- 190 (284)
T ss_pred ChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC-----------
Confidence 3 366666665543 3389999999999999999999999999998 211
Q ss_pred Cccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCC-cccCCCCce
Q 006722 496 AKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPN-DKKIRKDCM 552 (633)
Q Consensus 496 ~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~-~~~~R~dc~ 552 (633)
+.+|.+.+ ++|..|..+|+ .++++. .++|+++||+. +... ..++--|+-
T Consensus 191 ----T~~l~~~~~~ADIvI~AvG~~~~i~~~~---vk~GavVIDvG-in~~~~gkl~GDvd 243 (284)
T PRK14170 191 ----TKDLPQVAKEADILVVATGLAKFVKKDY---IKPGAIVIDVG-MDRDENNKLCGDVD 243 (284)
T ss_pred ----CCCHHHHHhhCCEEEEecCCcCccCHHH---cCCCCEEEEcc-CcccCCCCeecccc
Confidence 12344433 33555566664 467666 99999999998 6652 112445655
No 322
>PLN02494 adenosylhomocysteinase
Probab=91.42 E-value=1.6 Score=49.63 Aligned_cols=191 Identities=20% Similarity=0.188 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceEEeeCCCCcceeecCChhHHHHHHhcCCC--CccEEEEeccC
Q 006722 384 SINRLIEEAILEAEEKGAKVISLGLMNQGEELNRYGGVFVHKHPQLKMKVVDGSSLAVAVVINSIPK--GTTQVVLRGAL 461 (633)
Q Consensus 384 ~in~~i~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~L~irvv~Gnsltaavv~~~i~~--~~~~V~~~Gat 461 (633)
.++|+ +||.++.++-.-|++ +|.. .-|+ ..+-|.=||.|. .-.+++.... .-++|.|+|.
T Consensus 201 Gv~Rl--~~m~~~g~L~~Pvi~---------vnds----~~K~-~fDn~yGtgqS~-~d~i~r~t~i~LaGKtVvViGy- 262 (477)
T PLN02494 201 GVKRL--YQMQKNGTLLFPAIN---------VNDS----VTKS-KFDNLYGCRHSL-PDGLMRATDVMIAGKVAVICGY- 262 (477)
T ss_pred HHHHH--HHHHHCCCCCCCEEE---------EcCh----hhhh-hhhccccccccH-HHHHHHhcCCccCCCEEEEECC-
Confidence 44555 566666556666654 3333 1110 223456667775 3344444433 2278888886
Q ss_pred ccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEEE--EcC--cCCHHHHhhCCCCceee
Q 006722 462 TKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIWL--VGK--GLTEEEQSKAKKGTIFI 535 (633)
Q Consensus 462 gkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw~--vg~--~~~~~~q~~a~~G~~f~ 535 (633)
|+||+.+|+.|...|.+|+. +++.+...- ...|.... .+.++.+ .+|+++ .|. .+..+.-..+++|++++
T Consensus 263 G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~vv--~leEal~-~ADVVI~tTGt~~vI~~e~L~~MK~GAiLi 338 (477)
T PLN02494 263 GDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQVL--TLEDVVS-EADIFVTTTGNKDIIMVDHMRKMKNNAIVC 338 (477)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCeec--cHHHHHh-hCCEEEECCCCccchHHHHHhcCCCCCEEE
Confidence 59999999999888999998 555543322 22233221 2333221 344543 332 25677888899999999
Q ss_pred cccccCCCc-------------ccCCCCceeecCc----cccc--CCccccccccccCCCcchhhhHhhhhhhhhccCCC
Q 006722 536 PFSQFPPND-------------KKIRKDCMYHLTP----AMAV--PAAFENVDSCENWLPRRVMSAWRIGGIVHALEGWN 596 (633)
Q Consensus 536 ~~~~~~~~~-------------~~~R~dc~y~~~~----a~~~--p~~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~ 596 (633)
-++++.+.. .+.|..+..-+.+ .+.+ -+.+-|+ .|-.+.|..+|.-.++--.+-..|-|.
T Consensus 339 NvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~~i~ll~eGrlvNl-~~~~GhP~evmd~sFa~Q~la~~~l~~ 417 (477)
T PLN02494 339 NIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGSGIIVLAEGRLMNL-GCATGHPSFVMSCSFTNQVIAQLELWN 417 (477)
T ss_pred EcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCCEEEEEeCCccccc-cCCCCCCcceeeHHHHHHHHHHHHHHh
Confidence 999854322 1223222222221 1222 2247778 899999999999988776655555554
Q ss_pred c
Q 006722 597 E 597 (633)
Q Consensus 597 ~ 597 (633)
.
T Consensus 418 ~ 418 (477)
T PLN02494 418 E 418 (477)
T ss_pred c
Confidence 4
No 323
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=91.27 E-value=0.25 Score=54.20 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=31.5
Q ss_pred CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhH
Q 006722 451 GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDE 486 (633)
Q Consensus 451 ~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~ 486 (633)
.-.+|+|+||||.||+++++.|.++|.+|.. |+.++
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~ 96 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSG 96 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhh
Confidence 3468999999999999999999999999988 66654
No 324
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=91.27 E-value=0.52 Score=49.80 Aligned_cols=161 Identities=12% Similarity=0.093 Sum_probs=91.5
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEE--EEcCc--CCHH----
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIW--LVGKG--LTEE---- 523 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw--~vg~~--~~~~---- 523 (633)
+|.++| .|.+|.++|+.|.+.|.+|.+ |++++.++++++ |.... ....++.+ +++++ .+-+. ++..
T Consensus 3 ~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~-g~~~~-~s~~~~~~-~aDvVi~~vp~~~~~~~vl~~~ 78 (296)
T PRK15461 3 AIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDK-GATPA-ASPAQAAA-GAEFVITMLPNGDLVRSVLFGE 78 (296)
T ss_pred eEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHc-CCccc-CCHHHHHh-cCCEEEEecCCHHHHHHHHcCc
Confidence 567776 789999999999999999988 899999988776 33222 22222221 33332 22221 1111
Q ss_pred H--HhhCCCCceeecccccCCCcc-----cCC-CCceeecCcccccCCcc-ccccccccCCCcchhhhHhhhhhhhhccC
Q 006722 524 E--QSKAKKGTIFIPFSQFPPNDK-----KIR-KDCMYHLTPAMAVPAAF-ENVDSCENWLPRRVMSAWRIGGIVHALEG 594 (633)
Q Consensus 524 ~--q~~a~~G~~f~~~~~~~~~~~-----~~R-~dc~y~~~~a~~~p~~~-~~~~~~e~~~p~~~~~Ac~a~~~v~alEg 594 (633)
+ -..+++|+++++.|.++|... .++ +.+.|.+-|.+..|... ++--.+=.+-++....+| .-++.++-+
T Consensus 79 ~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~ldapV~g~~~~a~~g~l~~~~gg~~~~~~~~--~p~l~~~g~ 156 (296)
T PRK15461 79 NGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSDNAITGTLLLLAGGTAEQVERA--TPILMAMGN 156 (296)
T ss_pred ccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEEccCCCCHHHHHhCcEEEEECCCHHHHHHH--HHHHHHHcC
Confidence 1 113689999999999888741 111 56778888887766532 111011122344444333 345555544
Q ss_pred CCccccCcc-------c----------ccHHHHHHHHHhcCCcc
Q 006722 595 WNEHECGYA-------I----------SNIHNVWEAALRHGFHP 621 (633)
Q Consensus 595 w~~~e~G~~-------i----------~~i~~i~~aa~kHGF~p 621 (633)
...-+|.. + .-+-+.-..+.|+|..+
T Consensus 157 -~~~~~g~~G~g~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~Gld~ 199 (296)
T PRK15461 157 -ELINAGGPGMGIRVKLINNYMSIALNALSAEAAVLCEALGLSF 199 (296)
T ss_pred -CeEeeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 33344432 0 12233445677888877
No 325
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=91.25 E-value=0.65 Score=48.57 Aligned_cols=86 Identities=19% Similarity=0.248 Sum_probs=56.0
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEE--EEcCcC--C----HH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIW--LVGKGL--T----EE 523 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw--~vg~~~--~----~~ 523 (633)
+|.++| +|.+|+++|+.|.+.|.+|.. |++++.+++++. |.... ....+..+ +++++ .+-+.- . .+
T Consensus 4 ~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-g~~~~-~~~~e~~~-~~d~vi~~vp~~~~~~~v~~~~ 79 (296)
T PRK11559 4 KVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-GAETA-STAKAVAE-QCDVIITMLPNSPHVKEVALGE 79 (296)
T ss_pred eEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCeec-CCHHHHHh-cCCEEEEeCCCHHHHHHHHcCc
Confidence 688898 599999999999999999988 888888887654 22211 22223221 34443 222111 1 00
Q ss_pred H--HhhCCCCceeecccccCCC
Q 006722 524 E--QSKAKKGTIFIPFSQFPPN 543 (633)
Q Consensus 524 ~--q~~a~~G~~f~~~~~~~~~ 543 (633)
+ ...+++|+++++.|.++|.
T Consensus 80 ~~~~~~~~~g~iiid~st~~~~ 101 (296)
T PRK11559 80 NGIIEGAKPGTVVIDMSSIAPL 101 (296)
T ss_pred chHhhcCCCCcEEEECCCCCHH
Confidence 1 2346899999999998875
No 326
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=91.21 E-value=0.5 Score=50.51 Aligned_cols=29 Identities=10% Similarity=0.072 Sum_probs=27.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
++|+|+||||=||+.+++.|.++|.+|+.
T Consensus 16 ~~vlVtGatGfiG~~lv~~L~~~g~~V~~ 44 (348)
T PRK15181 16 KRWLITGVAGFIGSGLLEELLFLNQTVIG 44 (348)
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEE
Confidence 78999999999999999999999999876
No 327
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=91.11 E-value=0.58 Score=50.17 Aligned_cols=61 Identities=16% Similarity=0.171 Sum_probs=45.6
Q ss_pred ChhHHHHHHhcC--CCCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCc
Q 006722 437 SSLAVAVVINSI--PKGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAK 497 (633)
Q Consensus 437 nsltaavv~~~i--~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~ 497 (633)
+.+||+..+... .+.-..|++.||+|.||.++++.+..+|.+|.. +++++.+.+++++|+.
T Consensus 142 ~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~ 206 (348)
T PLN03154 142 AGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD 206 (348)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCC
Confidence 334454444322 223378999999999999999988888999876 7888988888788764
No 328
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.08 E-value=0.51 Score=50.01 Aligned_cols=151 Identities=24% Similarity=0.253 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCCh-
Q 006722 384 SINRLIEEAILEAEEKGAKVIS--LG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGSS- 438 (633)
Q Consensus 384 ~in~~i~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gns- 438 (633)
+-+.-+..-.+.|++.|++..- |. .++.+++||.|- ++.++.= | +++ .+=|||=+
T Consensus 45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~ 124 (278)
T PRK14172 45 GSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTF 124 (278)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCH
Confidence 3344444556789999998754 33 344457788874 4555431 1 232 22345533
Q ss_pred ---------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhCCc
Q 006722 439 ---------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFGAK 497 (633)
Q Consensus 439 ---------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~~~ 497 (633)
-|++.|++=+.. .-++|+++|.+.=||+-+|..|-++|..|++ .++
T Consensus 125 ~n~g~l~~g~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~------------- 191 (278)
T PRK14172 125 ISVGKFYKGEKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSK------------- 191 (278)
T ss_pred hhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC-------------
Confidence 356666554433 3399999999999999999999999999999 211
Q ss_pred cccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCCcccCCCCcee
Q 006722 498 SECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPNDKKIRKDCMY 553 (633)
Q Consensus 498 ~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~~~~~R~dc~y 553 (633)
+.+|.+.+ ++|..|..+|+ .++++. .++|++++|+- +.+...++--|+-+
T Consensus 192 --T~~l~~~~~~ADIvIsAvGkp~~i~~~~---ik~gavVIDvG-in~~~gkl~GDvd~ 244 (278)
T PRK14172 192 --TKNLKEVCKKADILVVAIGRPKFIDEEY---VKEGAIVIDVG-TSSVNGKITGDVNF 244 (278)
T ss_pred --CCCHHHHHhhCCEEEEcCCCcCccCHHH---cCCCcEEEEee-ccccCCceeeeccH
Confidence 12444444 44555566664 477766 99999999995 44421125566654
No 329
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=91.07 E-value=0.74 Score=47.79 Aligned_cols=44 Identities=25% Similarity=0.297 Sum_probs=38.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCc
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAK 497 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~ 497 (633)
..|++.||+|.+|.++++.+...|.+|.. +++++.+.+++ +|+.
T Consensus 145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~ 190 (329)
T cd08294 145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFD 190 (329)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCC
Confidence 78999999999999999988888999876 78889888876 7663
No 330
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=91.02 E-value=0.51 Score=50.55 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=89.8
Q ss_pred hHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceEEeeC-C-CCcc-----------------
Q 006722 383 ESINRLIEEAILEAEEKGAKV--ISLG-------LMNQGEELNRYG---GVFVHKH-P-QLKM----------------- 431 (633)
Q Consensus 383 ~~in~~i~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~i----------------- 431 (633)
.+-+.-+...++.|++.|++. .-|. ++..++++|.|- ++.++.= | +++.
T Consensus 51 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~ 130 (299)
T PLN02516 51 KDSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFH 130 (299)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccC
Confidence 344455556677899999986 4454 233336788774 4444431 1 2221
Q ss_pred -----eeecC--C----hhHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHh
Q 006722 432 -----KVVDG--S----SLAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSF 494 (633)
Q Consensus 432 -----rvv~G--n----sltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l 494 (633)
|+..| + .-|++.|++=+.. .-++|+++|.+.=||+-+|..|.++|-.|++ -++
T Consensus 131 ~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~---------- 200 (299)
T PLN02516 131 PLNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSR---------- 200 (299)
T ss_pred HhhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC----------
Confidence 23333 1 3466666655543 3399999999999999999999999999999 111
Q ss_pred CCccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCC
Q 006722 495 GAKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 495 ~~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 542 (633)
+.+|.+.+ ++|..|..+|+ .++++. .++|++++|+. +..
T Consensus 201 -----T~nl~~~~~~ADIvv~AvGk~~~i~~~~---vk~gavVIDvG-in~ 242 (299)
T PLN02516 201 -----TPDPESIVREADIVIAAAGQAMMIKGDW---IKPGAAVIDVG-TNA 242 (299)
T ss_pred -----CCCHHHHHhhCCEEEEcCCCcCccCHHH---cCCCCEEEEee-ccc
Confidence 12444444 33555566665 455554 99999999998 554
No 331
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.02 E-value=0.52 Score=50.13 Aligned_cols=146 Identities=16% Similarity=0.178 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ecc-------cccccccccCC---ceEEeeCC---CCc----------ceeecC--
Q 006722 384 SINRLIEEAILEAEEKGAKVIS--LGL-------MNQGEELNRYG---GVFVHKHP---QLK----------MKVVDG-- 436 (633)
Q Consensus 384 ~in~~i~~Ai~~A~k~G~kv~~--LG~-------ln~~e~ln~~g---~~~~~k~p---~L~----------irvv~G-- 436 (633)
+-+.-++.-++.|++.|++..- |-. ++.++++|.|- ++.++. | +++ .+=|||
T Consensus 46 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvql-PLp~~i~~~~i~~~I~p~KDVDGl~ 124 (284)
T PRK14177 46 ASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQH-PVPSQIDERAAFDRIALEKDVDGVT 124 (284)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcC-CCCCCCCHHHHHhccCcccccccCC
Confidence 3344445566789999998765 332 22336788764 344432 3 232 122333
Q ss_pred ----------C----hhHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhCC
Q 006722 437 ----------S----SLAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFGA 496 (633)
Q Consensus 437 ----------n----sltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~~ 496 (633)
+ .-|++.|++=+.. .-++|+++|.+.=||+-+|..|.++|-.|++ .++
T Consensus 125 ~~n~g~l~~g~~~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~------------ 192 (284)
T PRK14177 125 TLSFGKLSMGVETYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSK------------ 192 (284)
T ss_pred hhhHHHHHcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------
Confidence 2 2366666665543 3389999999999999999999999999999 211
Q ss_pred ccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCCcccCCCCce
Q 006722 497 KSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPNDKKIRKDCM 552 (633)
Q Consensus 497 ~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~~~~~R~dc~ 552 (633)
+.+|.+.+ ++|..|..+|+ .++++. .++|++++|+. +... ..-|+-
T Consensus 193 ---T~~l~~~~~~ADIvIsAvGk~~~i~~~~---ik~gavVIDvG-in~~---~~GDVd 241 (284)
T PRK14177 193 ---TQNLPSIVRQADIIVGAVGKPEFIKADW---ISEGAVLLDAG-YNPG---NVGDIE 241 (284)
T ss_pred ---CCCHHHHHhhCCEEEEeCCCcCccCHHH---cCCCCEEEEec-Cccc---ccCCcC
Confidence 12444444 44555566665 467666 99999999998 6553 445554
No 332
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=91.01 E-value=0.65 Score=48.85 Aligned_cols=86 Identities=15% Similarity=0.185 Sum_probs=56.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCc-EEEe--cChhHHHHHHHHhCCcccc----chhh----hcccCcceEEE--EcCc
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGI-QVVT--LREDEHEKLRKSFGAKSEC----NNLL----LSRSYSQKIWL--VGKG 519 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~l~~~~~~----~~l~----~~~~~~~~vw~--vg~~ 519 (633)
+.|++.||+|.||.++++.+..+|. +|.. +++++.+.+++++|+.... ..+. +.+....++++ +|..
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~ 235 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGE 235 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcH
Confidence 7899999999999999998888898 6776 7889999998888764321 1121 11211345543 2222
Q ss_pred CCHHHHhhCCCCceeeccc
Q 006722 520 LTEEEQSKAKKGTIFIPFS 538 (633)
Q Consensus 520 ~~~~~q~~a~~G~~f~~~~ 538 (633)
...+--..+.+|-.++.+.
T Consensus 236 ~~~~~~~~l~~~G~iv~~G 254 (345)
T cd08293 236 ISDTVISQMNENSHIILCG 254 (345)
T ss_pred HHHHHHHHhccCCEEEEEe
Confidence 2233344567777777765
No 333
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=90.99 E-value=0.17 Score=52.40 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=29.9
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEH 487 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~ 487 (633)
+|+++||+|.||+.+|+.|.++|.+|.. |+.++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 37 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR 37 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc
Confidence 6899999999999999999999999987 655543
No 334
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=90.91 E-value=0.17 Score=51.55 Aligned_cols=33 Identities=15% Similarity=0.231 Sum_probs=28.9
Q ss_pred EEEeccCccHHHHHHHHHhhcCcEEEe--cChhHH
Q 006722 455 VVLRGALTKVAYAIAFALCQKGIQVVT--LREDEH 487 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~ 487 (633)
|+|+||||-||+++++.|.++|.+|.. |+.+..
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 35 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAG 35 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCC
Confidence 689999999999999999999999987 665543
No 335
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.91 E-value=0.54 Score=50.31 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=91.2
Q ss_pred hHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCCh
Q 006722 383 ESINRLIEEAILEAEEKGAKVI--SLG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGSS 438 (633)
Q Consensus 383 ~~in~~i~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gns 438 (633)
.+-+.-+...++.|++.|++.. -|- +++..+++|.|- ++.++.= | +++ .+=|||=|
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~ 123 (297)
T PRK14186 44 PASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLH 123 (297)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence 3445555667788999999875 453 223336778764 4555431 1 222 22345543
Q ss_pred ----------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhCC
Q 006722 439 ----------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFGA 496 (633)
Q Consensus 439 ----------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~~ 496 (633)
-|+..|++=+.. .-++|+++|.+.=||+-+|..|.++|..|++ -++
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~------------ 191 (297)
T PRK14186 124 PLNLGRLVKGEPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSR------------ 191 (297)
T ss_pred hhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC------------
Confidence 356666655433 3399999999999999999999999999998 111
Q ss_pred ccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCC
Q 006722 497 KSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 497 ~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 542 (633)
+.+|.+.+ ++|..|..||+ .++++. .++|+++||+. +.+
T Consensus 192 ---T~~l~~~~~~ADIvIsAvGkp~~i~~~~---ik~gavVIDvG-in~ 233 (297)
T PRK14186 192 ---TQDLASITREADILVAAAGRPNLIGAEM---VKPGAVVVDVG-IHR 233 (297)
T ss_pred ---CCCHHHHHhhCCEEEEccCCcCccCHHH---cCCCCEEEEec-ccc
Confidence 12344333 33555566665 466665 99999999998 554
No 336
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=90.80 E-value=0.23 Score=52.56 Aligned_cols=29 Identities=17% Similarity=0.146 Sum_probs=27.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+.|+|+||||.||+++++.|.++|.+|..
T Consensus 7 ~~vlVTGatGfiG~~l~~~L~~~G~~V~~ 35 (340)
T PLN02653 7 KVALITGITGQDGSYLTEFLLSKGYEVHG 35 (340)
T ss_pred CEEEEECCCCccHHHHHHHHHHCCCEEEE
Confidence 67999999999999999999999999987
No 337
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.76 E-value=0.57 Score=49.79 Aligned_cols=167 Identities=21% Similarity=0.229 Sum_probs=103.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKVIS--LG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn 437 (633)
+.+-+.-+..-.+.|++.|+++.- |. +++.++++|.|- ++.++.= | +++ .+=|||=
T Consensus 41 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl 120 (282)
T PRK14169 41 DPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGF 120 (282)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccC
Confidence 334455556667789999998754 43 233347788864 4555431 1 222 2335554
Q ss_pred h----------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEecChhHHHHHHHHhCC
Q 006722 438 S----------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVTLREDEHEKLRKSFGA 496 (633)
Q Consensus 438 s----------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l~~~~~~~~l~~~l~~ 496 (633)
| -|+..|++=+.. .-++|+++|.+.=||+-+|..|.++|..|++-+
T Consensus 121 ~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtich------------- 187 (282)
T PRK14169 121 SPVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAH------------- 187 (282)
T ss_pred ChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEC-------------
Confidence 3 366666655543 338999999999999999999999999999810
Q ss_pred ccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCC-cccCCCCceeec-----CcccccCCccc
Q 006722 497 KSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPN-DKKIRKDCMYHL-----TPAMAVPAAFE 566 (633)
Q Consensus 497 ~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~-~~~~R~dc~y~~-----~~a~~~p~~~~ 566 (633)
..+.+|.+.+ ++|..|..+|+ .++++. .++|+++||+. +.+. ..++.-||-+.+ ...+.||+.+-
T Consensus 188 -s~T~~l~~~~~~ADIvI~AvG~p~~i~~~~---vk~GavVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iTPVPGGVG 261 (282)
T PRK14169 188 -SKTRNLKQLTKEADILVVAVGVPHFIGADA---VKPGAVVIDVG-ISRGADGKLLGDVDEAAVAPIASAITPVPGGVG 261 (282)
T ss_pred -CCCCCHHHHHhhCCEEEEccCCcCccCHHH---cCCCcEEEEee-ccccCCCCeeecCcHHHHHhhccEecCCCCCcH
Confidence 1112344444 44555566664 467665 99999999998 6652 112445665322 22345666543
No 338
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.75 E-value=0.57 Score=49.85 Aligned_cols=165 Identities=21% Similarity=0.235 Sum_probs=100.8
Q ss_pred hHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCCh
Q 006722 383 ESINRLIEEAILEAEEKGAKVI--SLG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGSS 438 (633)
Q Consensus 383 ~~in~~i~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gns 438 (633)
.+-+.-+....+.|++.|++.. -|. +++.++++|.|- ++.++.= | +++ .+=|||=|
T Consensus 43 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~ 122 (285)
T PRK14191 43 PASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFH 122 (285)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence 3444555666778999999864 444 233347788873 4444431 1 332 22245543
Q ss_pred ----------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhCC
Q 006722 439 ----------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFGA 496 (633)
Q Consensus 439 ----------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~~ 496 (633)
-|++.|++=+.. .-++|+|+|.+.-||+-+|..|.++|-.|++ -++.
T Consensus 123 ~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t----------- 191 (285)
T PRK14191 123 PLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT----------- 191 (285)
T ss_pred hhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc-----------
Confidence 466666655532 3389999999999999999999999999999 1111
Q ss_pred ccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCC-cccCCCCceeec-----CcccccCCccc
Q 006722 497 KSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPN-DKKIRKDCMYHL-----TPAMAVPAAFE 566 (633)
Q Consensus 497 ~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~-~~~~R~dc~y~~-----~~a~~~p~~~~ 566 (633)
.+|.+.+ ++|..|..+|+ .++++. .++|++++|+. +.+. ..++--|+-+.+ ...+.||+.+-
T Consensus 192 ----~~l~~~~~~ADIvV~AvG~p~~i~~~~---vk~GavVIDvG-i~~~~~gklvGDvd~e~v~~~a~~iTPVPGGVG 262 (285)
T PRK14191 192 ----KDLSFYTQNADIVCVGVGKPDLIKASM---VKKGAVVVDIG-INRLNDGRLVGDVDFENVAPKASFITPVPGGVG 262 (285)
T ss_pred ----HHHHHHHHhCCEEEEecCCCCcCCHHH---cCCCcEEEEee-cccccCCceeccccHHHHhhhccEEecCCCCCh
Confidence 1223233 33555556664 466555 89999999998 6542 112445655332 22344677554
No 339
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=90.72 E-value=0.31 Score=51.16 Aligned_cols=28 Identities=25% Similarity=0.338 Sum_probs=26.7
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+|+|+||||.||+++|+.|.++|.+|++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~ 29 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVI 29 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEE
Confidence 5899999999999999999999999987
No 340
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.68 E-value=0.49 Score=50.58 Aligned_cols=144 Identities=17% Similarity=0.129 Sum_probs=89.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCcE--EEecc-------cccccccccCC---ceEEeeC-C-CCc----------ceeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKV--ISLGL-------MNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv--~~LG~-------ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn 437 (633)
..+-+.-++..++.|++.|+++ .-|-. ++..+++|.|- ++.++.= | .++ .+=|||=
T Consensus 43 ~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl 122 (296)
T PRK14188 43 DPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGL 122 (296)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccC
Confidence 3445566677788999999985 44432 23336788884 4555431 1 332 2335554
Q ss_pred h----------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEec-ChhHHHHHHHHhC
Q 006722 438 S----------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVTL-REDEHEKLRKSFG 495 (633)
Q Consensus 438 s----------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l~-~~~~~~~l~~~l~ 495 (633)
+ -|++.|++=+.. .-++|.++|.++-+|+.+|+.|.++|..|++- ++.+
T Consensus 123 ~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~--------- 193 (296)
T PRK14188 123 HVVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR--------- 193 (296)
T ss_pred ChhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC---------
Confidence 4 256666654433 34899999999999999999999999999992 1211
Q ss_pred Cccccchhhhcc-cCcceEEEEcCcCCHHHHhhCCCCceeecccccCC
Q 006722 496 AKSECNNLLLSR-SYSQKIWLVGKGLTEEEQSKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 496 ~~~~~~~l~~~~-~~~~~vw~vg~~~~~~~q~~a~~G~~f~~~~~~~~ 542 (633)
++.+.+ ++|..+..+|+-= --+..++++|++++|+. +..
T Consensus 194 ------~l~e~~~~ADIVIsavg~~~-~v~~~~lk~GavVIDvG-in~ 233 (296)
T PRK14188 194 ------DLPAVCRRADILVAAVGRPE-MVKGDWIKPGATVIDVG-INR 233 (296)
T ss_pred ------CHHHHHhcCCEEEEecCChh-hcchheecCCCEEEEcC-Ccc
Confidence 122222 2244444444421 12223599999999998 544
No 341
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.65 E-value=0.59 Score=49.69 Aligned_cols=166 Identities=23% Similarity=0.242 Sum_probs=102.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKVIS--LG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn 437 (633)
..+-+.-+..-.+.|++.|++..- |. +++.+++||.|- ++.++.= | +++ .+=|||=
T Consensus 41 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl 120 (282)
T PRK14166 41 NPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGF 120 (282)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence 334455555667789999998543 43 233347788874 4444431 1 332 1113332
Q ss_pred -----------------hhHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHh
Q 006722 438 -----------------SLAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSF 494 (633)
Q Consensus 438 -----------------sltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l 494 (633)
.-|++.|++=+.. .-++|+++|.+.=||+-+|..|.++|..|++ -++
T Consensus 121 ~~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~---------- 190 (282)
T PRK14166 121 HPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK---------- 190 (282)
T ss_pred ChhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC----------
Confidence 3466666655543 3389999999999999999999999999998 111
Q ss_pred CCccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCC-cccCCCCceeec-----CcccccCCcc
Q 006722 495 GAKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPN-DKKIRKDCMYHL-----TPAMAVPAAF 565 (633)
Q Consensus 495 ~~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~-~~~~R~dc~y~~-----~~a~~~p~~~ 565 (633)
+.+|.+.+ ++|..|..+|+ .++++. .++|+++||+. +.+. ..++--||-+.. ...+-||+.+
T Consensus 191 -----T~nl~~~~~~ADIvIsAvGkp~~i~~~~---vk~GavVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iTPVPGGV 261 (282)
T PRK14166 191 -----TKDLSLYTRQADLIIVAAGCVNLLRSDM---VKEGVIVVDVG-INRLESGKIVGDVDFEEVSKKSSYITPVPGGV 261 (282)
T ss_pred -----CCCHHHHHhhCCEEEEcCCCcCccCHHH---cCCCCEEEEec-ccccCCCCeeCCCCHHHHHhhccEecCCCCCc
Confidence 12344444 44555566665 467666 99999999998 6653 122556666332 2224466654
Q ss_pred c
Q 006722 566 E 566 (633)
Q Consensus 566 ~ 566 (633)
-
T Consensus 262 G 262 (282)
T PRK14166 262 G 262 (282)
T ss_pred h
Confidence 4
No 342
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=90.40 E-value=0.54 Score=45.91 Aligned_cols=94 Identities=22% Similarity=0.235 Sum_probs=53.0
Q ss_pred HHHHHHhcCC-----CCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcc-cCcc
Q 006722 440 AVAVVINSIP-----KGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSR-SYSQ 511 (633)
Q Consensus 440 taavv~~~i~-----~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~-~~~~ 511 (633)
|+..+++=+. ..-++|+++|.+.-||+-++..|.++|..|++ .+. .++.+.+ ++|.
T Consensus 19 Tp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T----------------~~l~~~~~~ADI 82 (160)
T PF02882_consen 19 TPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT----------------KNLQEITRRADI 82 (160)
T ss_dssp HHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS----------------SSHHHHHTTSSE
T ss_pred CHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC----------------CcccceeeeccE
Confidence 4555554433 34489999999999999999999999999999 111 1233222 3344
Q ss_pred eEEEEcC--cCCHHHHhhCCCCceeecccccCCC--cccCCCCcee
Q 006722 512 KIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPN--DKKIRKDCMY 553 (633)
Q Consensus 512 ~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~--~~~~R~dc~y 553 (633)
.|..+|+ .++++ +.++|+++||+. +... ..++--||-+
T Consensus 83 VVsa~G~~~~i~~~---~ik~gavVIDvG-~~~~~~~~~~~GDv~~ 124 (160)
T PF02882_consen 83 VVSAVGKPNLIKAD---WIKPGAVVIDVG-INYVPGDGKLVGDVDF 124 (160)
T ss_dssp EEE-SSSTT-B-GG---GS-TTEEEEE---CEEETTTTEEEESB-H
T ss_pred Eeeeeccccccccc---cccCCcEEEecC-CccccccceeeecccH
Confidence 4445554 23333 599999999998 4433 2223366654
No 343
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=90.39 E-value=0.41 Score=50.68 Aligned_cols=63 Identities=19% Similarity=0.141 Sum_probs=37.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHH-HHHHhCCcccc-chhhhcccCcceEEEE
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEK-LRKSFGAKSEC-NNLLLSRSYSQKIWLV 516 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~-l~~~l~~~~~~-~~l~~~~~~~~~vw~v 516 (633)
.+|.++| .|.||+.+|+.|.++|..+.+ ++.++-+. -..++|...+. .+.......++|++++
T Consensus 4 ~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~Viv 70 (279)
T COG0287 4 MKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIV 70 (279)
T ss_pred cEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEE
Confidence 3455555 999999999999999999966 43333222 23336555554 3332222224555544
No 344
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.35 E-value=0.71 Score=49.16 Aligned_cols=164 Identities=20% Similarity=0.243 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceEEeeC-C-CCcc----------eeecCC--
Q 006722 384 SINRLIEEAILEAEEKGAKVIS--LG-------LMNQGEELNRYG---GVFVHKH-P-QLKM----------KVVDGS-- 437 (633)
Q Consensus 384 ~in~~i~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~i----------rvv~Gn-- 437 (633)
+-+.-+..-++.|++.|++..- |. +++.++++|.|- ++.++.= | +++. +=|||=
T Consensus 44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~ 123 (286)
T PRK14184 44 ASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHP 123 (286)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCH
Confidence 3444556667889999998754 33 333447788874 4445431 1 3331 123332
Q ss_pred --------------hhHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhh----cCcEEEe-cChhHHHHHHHH
Q 006722 438 --------------SLAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQ----KGIQVVT-LREDEHEKLRKS 493 (633)
Q Consensus 438 --------------sltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~----~~~~v~l-~~~~~~~~l~~~ 493 (633)
.-|++.|++=+.. .-++|+++|.+.=||+-+|..|.+ +|-.|++ .++.
T Consensus 124 ~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t-------- 195 (286)
T PRK14184 124 ENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRT-------- 195 (286)
T ss_pred hhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCc--------
Confidence 2466666654433 338999999999999999999998 8888888 2111
Q ss_pred hCCccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCCcccCCCCceeec-----CcccccCCcc
Q 006722 494 FGAKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPNDKKIRKDCMYHL-----TPAMAVPAAF 565 (633)
Q Consensus 494 l~~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~~~~~R~dc~y~~-----~~a~~~p~~~ 565 (633)
.+|.+.+ ++|..|..+|+ .++++. .++|++++|+. +++...++--|+-+.+ ...+-||+.+
T Consensus 196 -------~~l~~~~~~ADIVI~AvG~p~li~~~~---vk~GavVIDVG-i~~~~~~l~GDVdf~~v~~~a~~iTPVPGGV 264 (286)
T PRK14184 196 -------PDLAEECREADFLFVAIGRPRFVTADM---VKPGAVVVDVG-INRTDDGLVGDCDFEGLSDVASAITPVPGGV 264 (286)
T ss_pred -------hhHHHHHHhCCEEEEecCCCCcCCHHH---cCCCCEEEEee-eeccCCCccCCccHHHHHhhceEecCCCCCC
Confidence 1333333 33444555554 466655 89999999998 7763122556654322 2234566654
Q ss_pred c
Q 006722 566 E 566 (633)
Q Consensus 566 ~ 566 (633)
-
T Consensus 265 G 265 (286)
T PRK14184 265 G 265 (286)
T ss_pred h
Confidence 3
No 345
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=90.30 E-value=0.72 Score=47.81 Aligned_cols=99 Identities=20% Similarity=0.152 Sum_probs=61.5
Q ss_pred hHHHHHHhcCC-----CCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc--chh-h----
Q 006722 439 LAVAVVINSIP-----KGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC--NNL-L---- 504 (633)
Q Consensus 439 ltaavv~~~i~-----~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~--~~l-~---- 504 (633)
+||+..++.+. ++..+|++.|++|.+|.++++.+.++|.+|.. +++++.+.++ ++|..... +.. .
T Consensus 129 ~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~ 207 (326)
T cd08289 129 FTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREELQEESIK 207 (326)
T ss_pred HHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchhHHHHHHH
Confidence 35555555432 23368999999999999999999889999887 8889988884 57653322 111 1
Q ss_pred hcccCcceEEE--EcCcCCHHHHhhCCCCceeeccc
Q 006722 505 LSRSYSQKIWL--VGKGLTEEEQSKAKKGTIFIPFS 538 (633)
Q Consensus 505 ~~~~~~~~vw~--vg~~~~~~~q~~a~~G~~f~~~~ 538 (633)
+.+...+++++ +|.....+--+.++++-+++.+.
T Consensus 208 ~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g 243 (326)
T cd08289 208 PLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSG 243 (326)
T ss_pred hhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEe
Confidence 11111344542 22222233344567777788886
No 346
>PLN02427 UDP-apiose/xylose synthase
Probab=90.27 E-value=0.35 Score=52.29 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=33.8
Q ss_pred CCCccEEEEeccCccHHHHHHHHHhhc-CcEEEe--cChhHHHHHH
Q 006722 449 PKGTTQVVLRGALTKVAYAIAFALCQK-GIQVVT--LREDEHEKLR 491 (633)
Q Consensus 449 ~~~~~~V~~~Gatgkig~ava~~L~~~-~~~v~l--~~~~~~~~l~ 491 (633)
|-...+|+|+||||=||+.+++.|.++ |.+|.. |+.++.+.+.
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~ 56 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL 56 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh
Confidence 334468999999999999999999998 588886 6665555443
No 347
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=90.23 E-value=1.5 Score=48.98 Aligned_cols=160 Identities=15% Similarity=0.157 Sum_probs=90.6
Q ss_pred cceeecCChhHHHHHHhcCC--CCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhh
Q 006722 430 KMKVVDGSSLAVAVVINSIP--KGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLL 505 (633)
Q Consensus 430 ~irvv~Gnsltaavv~~~i~--~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~ 505 (633)
+-|.=+|.|.. -.+.+... ..-++|.|+| .|.||+.+|+.|...|.+|+. +++.|..... ..|. ....+.+
T Consensus 172 Dn~yg~g~s~~-~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~--~v~~lee 246 (406)
T TIGR00936 172 DNRYGTGQSTI-DGILRATNLLIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGF--RVMTMEE 246 (406)
T ss_pred hcccccchhHH-HHHHHhcCCCCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCC--EeCCHHH
Confidence 34556676633 33444432 2347888888 689999999999989999988 5666543322 2233 2112233
Q ss_pred cccCcceEEEE--c--CcCCHHHHhhCCCCceeecccccCCC------------cccCCCCce---eecCcccc-c-CCc
Q 006722 506 SRSYSQKIWLV--G--KGLTEEEQSKAKKGTIFIPFSQFPPN------------DKKIRKDCM---YHLTPAMA-V-PAA 564 (633)
Q Consensus 506 ~~~~~~~vw~v--g--~~~~~~~q~~a~~G~~f~~~~~~~~~------------~~~~R~dc~---y~~~~a~~-~-p~~ 564 (633)
..+ .+|+++. | +.++.+.=..+++|++++-+++++.. +.+.|.-.. .+++-.+. + -+.
T Consensus 247 al~-~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~eId~~aL~~~~~~~~~~~~~v~~~~~~~g~~i~ll~~Gr 325 (406)
T TIGR00936 247 AAK-IGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFDVEIDVKALEELAVEKRNVRPQVDEYILKDGRRIYLLAEGR 325 (406)
T ss_pred HHh-cCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCceeCHHHHHHHHhhccccccceEEEEeCCCCEEEEEeCCc
Confidence 221 3455432 2 22344455678999999999886642 112332211 11111111 1 123
Q ss_pred cccccccccCCCcchhhhHhhhhhhhhccCCC
Q 006722 565 FENVDSCENWLPRRVMSAWRIGGIVHALEGWN 596 (633)
Q Consensus 565 ~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~ 596 (633)
+-|+ .|..+.|..+|.--+|-=.+-+++=+.
T Consensus 326 lvNl-~~~~ghp~~vmd~sfa~q~la~~~l~~ 356 (406)
T TIGR00936 326 LVNL-AAAEGHPSEVMDMSFANQALAAEYLWK 356 (406)
T ss_pred eecc-cCCCCCcceeeCHHHHHHHHHHHHHHh
Confidence 6668 889999999997665544444444444
No 348
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.16 E-value=0.71 Score=49.04 Aligned_cols=166 Identities=20% Similarity=0.220 Sum_probs=102.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKVI--SLG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn 437 (633)
..+-+.-+...++.|++.|++.. -|. +++.+++||.|- ++.++.= | +++ .+=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl 121 (281)
T PRK14183 42 DPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGF 121 (281)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhccccc
Confidence 33445555666778999999854 342 333347788773 4555431 1 332 2224554
Q ss_pred h----------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhC
Q 006722 438 S----------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFG 495 (633)
Q Consensus 438 s----------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~ 495 (633)
+ -|++.|++=+.. .-++|+++|.+.-||+-+|..|.++|-.|++ .++
T Consensus 122 ~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~----------- 190 (281)
T PRK14183 122 HPYNVGRLVTGLDGFVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIF----------- 190 (281)
T ss_pred ChhhhhHHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC-----------
Confidence 3 366666665543 3389999999999999999999999999998 111
Q ss_pred Cccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCC-cccCCCCceeec-----CcccccCCccc
Q 006722 496 AKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPN-DKKIRKDCMYHL-----TPAMAVPAAFE 566 (633)
Q Consensus 496 ~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~-~~~~R~dc~y~~-----~~a~~~p~~~~ 566 (633)
+.+|.+.+ ++|..|..+|+ .++++. .++|+++||+. +.+. ..++.-|+-+.+ ...+-||+.+.
T Consensus 191 ----T~~l~~~~~~ADIvV~AvGkp~~i~~~~---vk~gavvIDvG-in~~~~gkl~GDVd~~~~~~~a~~iTPVPGGVG 262 (281)
T PRK14183 191 ----TKDLKAHTKKADIVIVGVGKPNLITEDM---VKEGAIVIDIG-INRTEDGRLVGDVDFENVAKKCSYITPVPGGVG 262 (281)
T ss_pred ----CcCHHHHHhhCCEEEEecCcccccCHHH---cCCCcEEEEee-ccccCCCCeECCccHHHHHhhceEecCCCCCCh
Confidence 12333333 44555666665 466655 99999999998 5552 112445655332 22345677554
No 349
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.14 E-value=0.4 Score=50.97 Aligned_cols=29 Identities=21% Similarity=0.311 Sum_probs=27.4
Q ss_pred cEEEEeccC--ccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGAL--TKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gat--gkig~ava~~L~~~~~~v~l 481 (633)
+.++++||. ++||+|+|+.|+++|-+|.+
T Consensus 9 k~alITGa~~~~GIG~a~A~~la~~Ga~Vvv 39 (299)
T PRK06300 9 KIAFIAGIGDDQGYGWGIAKALAEAGATILV 39 (299)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHCCCEEEE
Confidence 678999995 99999999999999999999
No 350
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=90.09 E-value=0.41 Score=52.98 Aligned_cols=87 Identities=17% Similarity=0.211 Sum_probs=56.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcC-cEEEe--cChhHHHHHHHHhCCcccc--------chhhhcccCcceEE--EEcCc
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKG-IQVVT--LREDEHEKLRKSFGAKSEC--------NNLLLSRSYSQKIW--LVGKG 519 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~l~~~~~~--------~~l~~~~~~~~~vw--~vg~~ 519 (633)
..|++.|| |.||+++|..|+++| .+|++ |+.+...+++...+-.-+. ..|+++.+ +.+++ ++.-.
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~-~~d~VIn~~p~~ 79 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIK-DFDLVINAAPPF 79 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHh-cCCEEEEeCCch
Confidence 46899999 999999999999997 89998 9999999997774111111 12222221 22443 33222
Q ss_pred CCH-HHHhhCCCCceeecccccC
Q 006722 520 LTE-EEQSKAKKGTIFIPFSQFP 541 (633)
Q Consensus 520 ~~~-~~q~~a~~G~~f~~~~~~~ 541 (633)
.+. --|.-++.|++++|.|--.
T Consensus 80 ~~~~i~ka~i~~gv~yvDts~~~ 102 (389)
T COG1748 80 VDLTILKACIKTGVDYVDTSYYE 102 (389)
T ss_pred hhHHHHHHHHHhCCCEEEcccCC
Confidence 222 1234468899999998533
No 351
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=90.08 E-value=1.6 Score=46.81 Aligned_cols=141 Identities=18% Similarity=0.156 Sum_probs=77.4
Q ss_pred HcCCcEEEecccccccccccCCceEEeeCCC--CcceeecCChhHH-------HHHHhcC-CCCccEEEEeccCccHHHH
Q 006722 398 EKGAKVISLGLMNQGEELNRYGGVFVHKHPQ--LKMKVVDGSSLAV-------AVVINSI-PKGTTQVVLRGALTKVAYA 467 (633)
Q Consensus 398 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~--L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatgkig~a 467 (633)
-.|+|+++.--=|....+..--++.+--++. .-+.+.||+.+|+ |++.+-+ |++.+.+.++|+ |..|+.
T Consensus 64 ~~gvK~v~~~p~N~~~glP~~~g~i~L~D~~TG~p~ai~dg~~lT~~RTaA~sala~~~La~~~~~~l~viGa-G~QA~~ 142 (313)
T PF02423_consen 64 VAGVKWVSVFPGNPKRGLPSIQGVILLFDPETGEPLAIMDGTWLTALRTAAVSALAARYLARPDARTLGVIGA-GVQARW 142 (313)
T ss_dssp EEEEEEEEEETTCGGGTSSSEEEEEEEEETTT--EEEEEESHHHHHHHHHHHHHHHHHHHS-TT--EEEEE---SHHHHH
T ss_pred EEEEEEEEecCCccccCCCceeEEEEEEECCCCCEEEEecccchhhhHHHHHHHHHHHHhCcCCCceEEEECC-CHHHHH
Confidence 4688888854434433333222333433332 3388999999984 3333433 678888888884 789999
Q ss_pred HHHHHhh-cCc-EEEe--cChhHHHHHHHHhCCcccc-----chhhhcccCcceEEEE----cC---cCCHHHHhhCCCC
Q 006722 468 IAFALCQ-KGI-QVVT--LREDEHEKLRKSFGAKSEC-----NNLLLSRSYSQKIWLV----GK---GLTEEEQSKAKKG 531 (633)
Q Consensus 468 va~~L~~-~~~-~v~l--~~~~~~~~l~~~l~~~~~~-----~~l~~~~~~~~~vw~v----g~---~~~~~~q~~a~~G 531 (633)
-+++|++ +++ +|.+ |++++.+++.+++.. ... .+..++.. ++||++. .+ .++. .|+++|
T Consensus 143 ~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~~~~v~~~~~~~~av~-~aDii~taT~s~~~~P~~~~---~~l~~g 217 (313)
T PF02423_consen 143 HLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-LGVPVVAVDSAEEAVR-GADIIVTATPSTTPAPVFDA---EWLKPG 217 (313)
T ss_dssp HHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-CCTCEEEESSHHHHHT-TSSEEEE----SSEEESB-G---GGS-TT
T ss_pred HHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-ccccceeccchhhhcc-cCCEEEEccCCCCCCccccH---HHcCCC
Confidence 9999885 344 4455 999999999999822 111 11222111 5666532 11 2333 369999
Q ss_pred ceeecccccCCCc
Q 006722 532 TIFIPFSQFPPND 544 (633)
Q Consensus 532 ~~f~~~~~~~~~~ 544 (633)
+++..+.--.|.+
T Consensus 218 ~hi~~iGs~~~~~ 230 (313)
T PF02423_consen 218 THINAIGSYTPGM 230 (313)
T ss_dssp -EEEE-S-SSTTB
T ss_pred cEEEEecCCCCch
Confidence 9999888644443
No 352
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.93 E-value=0.75 Score=48.88 Aligned_cols=165 Identities=17% Similarity=0.188 Sum_probs=101.2
Q ss_pred hHHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceEEeeC-C-CCcc-----------------
Q 006722 383 ESINRLIEEAILEAEEKGAKVISLG---------LMNQGEELNRYG---GVFVHKH-P-QLKM----------------- 431 (633)
Q Consensus 383 ~~in~~i~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p-~L~i----------------- 431 (633)
.+-+.-+...++.|++.|++..-.= +++.++++|.|- ++.++.= | +++.
T Consensus 42 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~ 121 (282)
T PRK14182 42 PASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFH 121 (282)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCC
Confidence 3445555666788999999875432 333347788874 4445431 1 3321
Q ss_pred -----eeecCC-----hhHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhC
Q 006722 432 -----KVVDGS-----SLAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFG 495 (633)
Q Consensus 432 -----rvv~Gn-----sltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~ 495 (633)
|+..|+ .-|++.|++=+.. .-++|+++|.+.=||+-+|..|.++|-.|++ .++
T Consensus 122 ~~n~g~l~~g~~~~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~----------- 190 (282)
T PRK14182 122 PFNVGALSIGIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSR----------- 190 (282)
T ss_pred HhHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC-----------
Confidence 222222 2366666654433 3489999999999999999999999999999 111
Q ss_pred Cccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCCC-cccCCCCceeec-----CcccccCCccc
Q 006722 496 AKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPPN-DKKIRKDCMYHL-----TPAMAVPAAFE 566 (633)
Q Consensus 496 ~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~-~~~~R~dc~y~~-----~~a~~~p~~~~ 566 (633)
+.+|.+.+ ++|..|..+|+ -++++. .++|++++|+. +... ..++.-|+-+.+ .....||+.+-
T Consensus 191 ----T~nl~~~~~~ADIvI~AvGk~~~i~~~~---ik~gaiVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iTPVPGGVG 262 (282)
T PRK14182 191 ----TADLAGEVGRADILVAAIGKAELVKGAW---VKEGAVVIDVG-MNRLADGKLVGDVEFAAAAARASAITPVPGGVG 262 (282)
T ss_pred ----CCCHHHHHhhCCEEEEecCCcCccCHHH---cCCCCEEEEee-ceecCCCCeeCCCCHHHHHhhccEecCCCCCCh
Confidence 12444444 33555566665 466665 99999999998 6653 122456655322 22344666543
No 353
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.85 E-value=0.73 Score=49.32 Aligned_cols=142 Identities=20% Similarity=0.180 Sum_probs=89.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceEEeeC-C-CCcc----------------
Q 006722 382 NESINRLIEEAILEAEEKGAKVISLG---------LMNQGEELNRYG---GVFVHKH-P-QLKM---------------- 431 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p-~L~i---------------- 431 (633)
..+-+.-+...++.|++.|++..-.= +++.++++|.|- ++.++.= | +++.
T Consensus 44 d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl 123 (297)
T PRK14168 44 SPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGF 123 (297)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccc
Confidence 33445555667788999999876531 122236777774 3344321 1 2221
Q ss_pred ------eeecCC------hhHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhc----CcEEEe-cChhHHHH
Q 006722 432 ------KVVDGS------SLAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQK----GIQVVT-LREDEHEK 489 (633)
Q Consensus 432 ------rvv~Gn------sltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~----~~~v~l-~~~~~~~~ 489 (633)
|+..|+ .-|++.|++=+.. .-++|+|+|.+.-||+-+|..|.++ +-.|++ -++
T Consensus 124 ~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~----- 198 (297)
T PRK14168 124 HPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTR----- 198 (297)
T ss_pred ChhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCC-----
Confidence 333443 3466666665543 3399999999999999999999998 788988 111
Q ss_pred HHHHhCCccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCC
Q 006722 490 LRKSFGAKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 490 l~~~l~~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 542 (633)
+.+|.+.+ ++|..|.++|+ .++++. .++|+++||+. ++.
T Consensus 199 ----------T~~l~~~~~~ADIvVsAvGkp~~i~~~~---ik~gavVIDvG-in~ 240 (297)
T PRK14168 199 ----------SKNLARHCQRADILIVAAGVPNLVKPEW---IKPGATVIDVG-VNR 240 (297)
T ss_pred ----------CcCHHHHHhhCCEEEEecCCcCccCHHH---cCCCCEEEecC-CCc
Confidence 12344333 33555555665 467766 99999999998 554
No 354
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=89.79 E-value=0.36 Score=52.24 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=34.4
Q ss_pred CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHH
Q 006722 451 GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEK 489 (633)
Q Consensus 451 ~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~ 489 (633)
+.+.|+|+||||=||+.|+..|-+||..|.- |++++-++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~ 45 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKK 45 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhh
Confidence 5579999999999999999999999999987 88887433
No 355
>PLN02572 UDP-sulfoquinovose synthase
Probab=89.79 E-value=0.31 Score=54.41 Aligned_cols=29 Identities=24% Similarity=0.400 Sum_probs=27.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
++|+|+||||-||+.+|+.|.++|.+|.+
T Consensus 48 k~VLVTGatGfIGs~Lv~~L~~~G~~V~~ 76 (442)
T PLN02572 48 KKVMVIGGDGYCGWATALHLSKRGYEVAI 76 (442)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEE
Confidence 68999999999999999999999999987
No 356
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=89.75 E-value=0.64 Score=44.52 Aligned_cols=39 Identities=23% Similarity=0.354 Sum_probs=35.1
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+|.++|| |..|.|+|..|+++|.+|+| |+++..+.|+++
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~ 41 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINET 41 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHH
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence 4788887 67899999999999999999 999999999987
No 357
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=89.70 E-value=0.3 Score=51.87 Aligned_cols=29 Identities=10% Similarity=0.197 Sum_probs=25.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
++|+|+||||-||+++|+.|+++|.+++.
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~ 30 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVV 30 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEE
Confidence 57999999999999999999999977543
No 358
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=89.62 E-value=0.39 Score=52.27 Aligned_cols=39 Identities=28% Similarity=0.485 Sum_probs=31.9
Q ss_pred EEEeccCccHHHHHHHHHhhcC-c-EEEe--cChhHHHHHHHHh
Q 006722 455 VVLRGALTKVAYAIAFALCQKG-I-QVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~-~-~v~l--~~~~~~~~l~~~l 494 (633)
|++.|+ |.+|+++|+.|.+++ . +|++ ||.++.+++.+++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~ 43 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL 43 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc
Confidence 689999 999999999999995 5 7888 9999999998764
No 359
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=89.60 E-value=0.69 Score=50.69 Aligned_cols=142 Identities=14% Similarity=0.128 Sum_probs=91.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEEEe--ccc-------ccccccccCC---ceEEeeC-C-CCc----------c------
Q 006722 382 NESINRLIEEAILEAEEKGAKVISL--GLM-------NQGEELNRYG---GVFVHKH-P-QLK----------M------ 431 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv~~L--G~l-------n~~e~ln~~g---~~~~~k~-p-~L~----------i------ 431 (633)
+.+-+.-+...++.|++.|++..-. -.- +.+++||.|- ++.++.= | +++ .
T Consensus 114 dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl 193 (364)
T PLN02616 114 RKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGF 193 (364)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence 3344455566677899999986543 222 1226778874 4444431 1 332 1
Q ss_pred ------eeecC--C----hhHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHH
Q 006722 432 ------KVVDG--S----SLAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKS 493 (633)
Q Consensus 432 ------rvv~G--n----sltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~ 493 (633)
|+..| + .-|++.|++=+.. .-++|+|+|.+.=||+-+|..|.++|-.|++ -++
T Consensus 194 ~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~--------- 264 (364)
T PLN02616 194 HPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------- 264 (364)
T ss_pred ChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCC---------
Confidence 23333 1 3466667665543 3389999999999999999999999999999 111
Q ss_pred hCCccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCC
Q 006722 494 FGAKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 494 l~~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 542 (633)
+.+|.+.+ ++|..|..+|+ -++++. .++|+++||+- +.+
T Consensus 265 ------T~nl~~~~r~ADIVIsAvGkp~~i~~d~---vK~GAvVIDVG-In~ 306 (364)
T PLN02616 265 ------TKNPEEITREADIIISAVGQPNMVRGSW---IKPGAVVIDVG-INP 306 (364)
T ss_pred ------CCCHHHHHhhCCEEEEcCCCcCcCCHHH---cCCCCEEEecc-ccc
Confidence 12444444 44555566665 466665 99999999997 655
No 360
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=89.59 E-value=0.47 Score=46.56 Aligned_cols=27 Identities=26% Similarity=0.423 Sum_probs=25.2
Q ss_pred EEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 455 VVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
|+++||||=||+++++.|.++|.+|+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~ 27 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIV 27 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccc
Confidence 789999999999999999999999664
No 361
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=89.56 E-value=1 Score=47.50 Aligned_cols=107 Identities=20% Similarity=0.162 Sum_probs=67.3
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccC--cceE--EEEcCc--CC---H
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSY--SQKI--WLVGKG--LT---E 522 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~--~~~v--w~vg~~--~~---~ 522 (633)
+|.++| .|.+|+++|+.|.++|.+|.+ |++++.+.+++. |+... ....+..+. ++++ ..+-+. .. +
T Consensus 2 ~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~~-~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~~ 78 (301)
T PRK09599 2 QLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEE-GATGA-DSLEELVAKLPAPRVVWLMVPAGEITDATID 78 (301)
T ss_pred EEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-CCeec-CCHHHHHhhcCCCCEEEEEecCCcHHHHHHH
Confidence 577787 799999999999999999998 889999988664 43322 222222211 2333 333221 11 1
Q ss_pred HHHhhCCCCceeecccccCCCcc-----cCC-CCceeecCcccccCC
Q 006722 523 EEQSKAKKGTIFIPFSQFPPNDK-----KIR-KDCMYHLTPAMAVPA 563 (633)
Q Consensus 523 ~~q~~a~~G~~f~~~~~~~~~~~-----~~R-~dc~y~~~~a~~~p~ 563 (633)
+-...+++|.++++.+..+|... +++ +.+.|.+-|.+--|.
T Consensus 79 ~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~~dapvsG~~~ 125 (301)
T PRK09599 79 ELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGIHFVDVGTSGGVW 125 (301)
T ss_pred HHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCCEEEeCCCCcCHH
Confidence 11234788999999988777431 122 567788877665444
No 362
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=89.54 E-value=0.38 Score=49.56 Aligned_cols=28 Identities=18% Similarity=0.298 Sum_probs=26.4
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+|+|+||||.||+++++.|.++|.+|.+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~ 28 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVV 28 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEE
Confidence 4899999999999999999999999987
No 363
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.50 E-value=0.95 Score=48.20 Aligned_cols=142 Identities=23% Similarity=0.225 Sum_probs=90.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKV--ISLG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn 437 (633)
..+-+.-++.-++.|++.|++. .-|- +++..+++|.|- ++.++.= | +++ .+=|||=
T Consensus 44 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl 123 (285)
T PRK10792 44 DPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGF 123 (285)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCcc
Confidence 3344555566778899999984 4443 233337788774 4444431 1 221 1234443
Q ss_pred h----------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhC
Q 006722 438 S----------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFG 495 (633)
Q Consensus 438 s----------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~ 495 (633)
| -|++.|++-+.. .-++|+|+|.+.=||+-+|..|.++|-.|++ -++
T Consensus 124 ~~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~----------- 192 (285)
T PRK10792 124 HPYNVGRLAQRIPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF----------- 192 (285)
T ss_pred ChhhHhHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC-----------
Confidence 3 366776666543 2389999999999999999999999999999 111
Q ss_pred Cccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCC
Q 006722 496 AKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 496 ~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 542 (633)
+.+|.+.+ ++|..|..+|+ .++++. .++|++++|+. +.+
T Consensus 193 ----T~~l~~~~~~ADIvi~avG~p~~v~~~~---vk~gavVIDvG-in~ 234 (285)
T PRK10792 193 ----TKNLRHHVRNADLLVVAVGKPGFIPGEW---IKPGAIVIDVG-INR 234 (285)
T ss_pred ----CCCHHHHHhhCCEEEEcCCCcccccHHH---cCCCcEEEEcc-ccc
Confidence 12334333 33555555643 466654 99999999998 555
No 364
>PRK07578 short chain dehydrogenase; Provisional
Probab=89.47 E-value=0.35 Score=46.95 Aligned_cols=30 Identities=20% Similarity=0.350 Sum_probs=26.4
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cCh
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LRE 484 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~ 484 (633)
+++++||+|+||+++|+.|+++ .+|.+ |++
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~ 33 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSS 33 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC
Confidence 5899999999999999999998 78777 544
No 365
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=89.45 E-value=0.94 Score=41.14 Aligned_cols=83 Identities=18% Similarity=0.181 Sum_probs=48.5
Q ss_pred EEEEeccCccHHHHHHHHHhhc-CcEEEe---cChhHHHHHHHHhCCccccch----hh-hcc-cCcceEE--EEcCcCC
Q 006722 454 QVVLRGALTKVAYAIAFALCQK-GIQVVT---LREDEHEKLRKSFGAKSECNN----LL-LSR-SYSQKIW--LVGKGLT 521 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~-~~~v~l---~~~~~~~~l~~~l~~~~~~~~----l~-~~~-~~~~~vw--~vg~~~~ 521 (633)
+|.++|++|.+|+.++..|.+. ++++.. +++++-+.++..- ++..+. .. +.. ..+++++ .+++...
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~ 78 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAG--PHLKGEVVLELEPEDFEELAVDIVFLALPHGVS 78 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHC--cccccccccccccCChhhcCCCEEEEcCCcHHH
Confidence 4789999999999999999984 777665 3333333333332 211100 00 111 1245554 3444444
Q ss_pred HH----HHhhCCCCceeeccc
Q 006722 522 EE----EQSKAKKGTIFIPFS 538 (633)
Q Consensus 522 ~~----~q~~a~~G~~f~~~~ 538 (633)
.+ -+..+.+|.+++|.|
T Consensus 79 ~~~~~~~~~~~~~g~~viD~s 99 (122)
T smart00859 79 KEIAPLLPKAAEAGVKVIDLS 99 (122)
T ss_pred HHHHHHHHhhhcCCCEEEECC
Confidence 44 234468999999998
No 366
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.38 E-value=0.84 Score=48.88 Aligned_cols=140 Identities=20% Similarity=0.223 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCCh-
Q 006722 384 SINRLIEEAILEAEEKGAKVI--SLG-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGSS- 438 (633)
Q Consensus 384 ~in~~i~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gns- 438 (633)
+-+.-+....+.|++.|++.. -|. +++.++++|.|- ++.++.= | +++ .+=|||=|
T Consensus 44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~ 123 (297)
T PRK14167 44 ASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHP 123 (297)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCCh
Confidence 444555666778999999864 343 333447788874 4555431 1 222 22345543
Q ss_pred ---------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhc----CcEEEe-cChhHHHHHHHH
Q 006722 439 ---------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQK----GIQVVT-LREDEHEKLRKS 493 (633)
Q Consensus 439 ---------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~----~~~v~l-~~~~~~~~l~~~ 493 (633)
-|+..|++=+.. .-++|+++|.+.=||+-+|..|.++ +..|++ -++
T Consensus 124 ~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~--------- 194 (297)
T PRK14167 124 ENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSR--------- 194 (297)
T ss_pred hhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCC---------
Confidence 466666665543 3399999999999999999999988 788888 111
Q ss_pred hCCccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCC
Q 006722 494 FGAKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 494 l~~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 542 (633)
+.+|.+.+ ++|..|.++|+ .++++. .++|+++||+. +..
T Consensus 195 ------T~~l~~~~~~ADIvIsAvGkp~~i~~~~---ik~gaiVIDvG-in~ 236 (297)
T PRK14167 195 ------TDDLAAKTRRADIVVAAAGVPELIDGSM---LSEGATVIDVG-INR 236 (297)
T ss_pred ------CCCHHHHHhhCCEEEEccCCcCccCHHH---cCCCCEEEEcc-ccc
Confidence 12444444 33555566675 577766 99999999998 655
No 367
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=89.38 E-value=0.24 Score=53.40 Aligned_cols=127 Identities=20% Similarity=0.254 Sum_probs=69.4
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEE---E-e-cChhHHHHHHHHhCCcccc-chhh-hcccCcceE--EEEcCcCCHHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQV---V-T-LREDEHEKLRKSFGAKSEC-NNLL-LSRSYSQKI--WLVGKGLTEEE 524 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v---~-l-~~~~~~~~l~~~l~~~~~~-~~l~-~~~~~~~~v--w~vg~~~~~~~ 524 (633)
+|+++||||.+|+.+++.|.+++..+ . + ++++.=+.+. ++..... ..+. +..+ ++|+ ...|...+.+-
T Consensus 3 ~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~--~~g~~i~v~d~~~~~~~-~vDvVf~A~g~g~s~~~ 79 (334)
T PRK14874 3 NVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS--FKGKELKVEDLTTFDFS-GVDIALFSAGGSVSKKY 79 (334)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee--eCCceeEEeeCCHHHHc-CCCEEEECCChHHHHHH
Confidence 69999999999999999999976542 3 2 3332222221 1100000 1111 1111 3444 46777776663
Q ss_pred Hhh-CCCCceeecccccCCCcccCC--CCceeecCcccccCCccccccccccCCCcchhhh--HhhhhhhhhccCCCc
Q 006722 525 QSK-AKKGTIFIPFSQFPPNDKKIR--KDCMYHLTPAMAVPAAFENVDSCENWLPRRVMSA--WRIGGIVHALEGWNE 597 (633)
Q Consensus 525 q~~-a~~G~~f~~~~~~~~~~~~~R--~dc~y~~~~a~~~p~~~~~~~~~e~~~p~~~~~A--c~a~~~v~alEgw~~ 597 (633)
=.+ +..|+.++|.| ...| +|+. +.+|+ ++ -+.-....-++.++. |.+-+++++|--...
T Consensus 80 ~~~~~~~G~~VIDlS------~~~R~~~~~p------~~lpe-vn-~~~i~~~~~~~iVanp~C~~t~~~l~l~pL~~ 143 (334)
T PRK14874 80 APKAAAAGAVVIDNS------SAFRMDPDVP------LVVPE-VN-PEALAEHRKKGIIANPNCSTIQMVVALKPLHD 143 (334)
T ss_pred HHHHHhCCCEEEECC------chhhcCCCCC------eEcCC-cC-HHHHhhhhcCCeEECccHHHHHHHHHHHHHHH
Confidence 333 47899999999 5555 3433 45666 21 101111101234443 999999988765543
No 368
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=89.37 E-value=1 Score=46.68 Aligned_cols=44 Identities=20% Similarity=0.179 Sum_probs=38.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
..|++.|++|.+|.++++.+.++|.+|+. ++.++.+.+++++|.
T Consensus 147 ~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~ 192 (329)
T cd05288 147 ETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF 192 (329)
T ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC
Confidence 78999999999999999999889999877 788888888776765
No 369
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=89.32 E-value=0.49 Score=52.69 Aligned_cols=42 Identities=31% Similarity=0.331 Sum_probs=36.4
Q ss_pred CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHH
Q 006722 451 GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRK 492 (633)
Q Consensus 451 ~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 492 (633)
....|+|+||||++|+=+.+.|-+||..|.. |++++-+++-.
T Consensus 78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 4589999999999999999999999988877 88888666644
No 370
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.13 E-value=1.4 Score=47.06 Aligned_cols=143 Identities=20% Similarity=0.196 Sum_probs=91.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceEEeeC-C-CCc----------c------
Q 006722 382 NESINRLIEEAILEAEEKGAKVISLG---------LMNQGEELNRYG---GVFVHKH-P-QLK----------M------ 431 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p-~L~----------i------ 431 (633)
+.+-+.-+...++.|++.|++..-.= ++..+++||.|- ++.++.= | +++ .
T Consensus 37 d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl 116 (287)
T PRK14181 37 DPASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGL 116 (287)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccC
Confidence 33445555667788999999875542 344457788765 4444321 1 222 1
Q ss_pred ------eeecCC-----hhHHHHHHhcCC-----CCccEEEEeccCccHHHHHHHHHhhc----CcEEEecChhHHHHHH
Q 006722 432 ------KVVDGS-----SLAVAVVINSIP-----KGTTQVVLRGALTKVAYAIAFALCQK----GIQVVTLREDEHEKLR 491 (633)
Q Consensus 432 ------rvv~Gn-----sltaavv~~~i~-----~~~~~V~~~Gatgkig~ava~~L~~~----~~~v~l~~~~~~~~l~ 491 (633)
|+..|+ .-|+..|++=+. -.-++|+++|.+.=||+-+|..|.++ +-.|++-+
T Consensus 117 ~p~n~g~l~~g~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvch-------- 188 (287)
T PRK14181 117 HPVNMGKLLLGETDGFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLH-------- 188 (287)
T ss_pred ChhhHHHHhcCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeC--------
Confidence 223343 236666665443 33499999999999999999999999 78998811
Q ss_pred HHhCCccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCC
Q 006722 492 KSFGAKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 492 ~~l~~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 542 (633)
..+.+|.+.+ ++|..|..+|+ -++++. .++|++++|+. +.+
T Consensus 189 ------s~T~~l~~~~~~ADIvV~AvG~p~~i~~~~---ik~GavVIDvG-in~ 232 (287)
T PRK14181 189 ------SQSENLTEILKTADIIIAAIGVPLFIKEEM---IAEKAVIVDVG-TSR 232 (287)
T ss_pred ------CCCCCHHHHHhhCCEEEEccCCcCccCHHH---cCCCCEEEEec-ccc
Confidence 0112444444 33555566665 466665 99999999998 554
No 371
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.08 E-value=0.86 Score=48.71 Aligned_cols=42 Identities=19% Similarity=0.366 Sum_probs=35.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
+.|+++|+.|++||++|+-++|||-++.+ .|++-.++-.+++
T Consensus 39 ~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~ 82 (300)
T KOG1201|consen 39 EIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEI 82 (300)
T ss_pred CEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHH
Confidence 67888999999999999999999998877 6666666666665
No 372
>PLN02240 UDP-glucose 4-epimerase
Probab=88.88 E-value=0.44 Score=50.37 Aligned_cols=29 Identities=17% Similarity=0.299 Sum_probs=27.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
++|+++||||.||+++++.|.++|.+|+.
T Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~ 34 (352)
T PLN02240 6 RTILVTGGAGYIGSHTVLQLLLAGYKVVV 34 (352)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEE
Confidence 57999999999999999999999999987
No 373
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=88.87 E-value=1.1 Score=50.65 Aligned_cols=75 Identities=20% Similarity=0.208 Sum_probs=46.5
Q ss_pred HhcCCC-CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccc--hhhhcccCcceEEEEcCc
Q 006722 445 INSIPK-GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECN--NLLLSRSYSQKIWLVGKG 519 (633)
Q Consensus 445 ~~~i~~-~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~--~l~~~~~~~~~vw~vg~~ 519 (633)
++..|+ +-++|.|.| .|+.|+|+|++|.++|.+|+. ++..+..++.+++|..-..+ ...... +++++|+..+
T Consensus 7 ~~~~~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~--~~d~vV~Spg 83 (473)
T PRK00141 7 LSALPQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQLD--SFSLVVTSPG 83 (473)
T ss_pred hhhcccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHhc--CCCEEEeCCC
Confidence 344454 446799999 788999999999999999999 44344444444444333221 111122 4566777666
Q ss_pred CCH
Q 006722 520 LTE 522 (633)
Q Consensus 520 ~~~ 522 (633)
+.+
T Consensus 84 i~~ 86 (473)
T PRK00141 84 WRP 86 (473)
T ss_pred CCC
Confidence 653
No 374
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=88.75 E-value=0.66 Score=49.92 Aligned_cols=53 Identities=13% Similarity=0.205 Sum_probs=45.6
Q ss_pred HHHHhcCCCCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 442 AVVINSIPKGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 442 avv~~~i~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
....-..|+-...|+++|.++++|.++|.-+.++|-+|++ |++++++++++++
T Consensus 23 ~~~~~~~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l 77 (331)
T KOG1210|consen 23 HRSFIVKPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAEL 77 (331)
T ss_pred HHhhhcccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhh
Confidence 3334444666689999999999999999999999888888 9999999999998
No 375
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=88.58 E-value=1.1 Score=48.18 Aligned_cols=58 Identities=22% Similarity=0.190 Sum_probs=43.5
Q ss_pred HHHHHHhcCCC-C-ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcc
Q 006722 440 AVAVVINSIPK-G-TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKS 498 (633)
Q Consensus 440 taavv~~~i~~-~-~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~ 498 (633)
||+..+.+.-+ . -.+|++.||+|+||++..+.+...|..+.. .++++.+ +.+++|+..
T Consensus 129 TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~ 190 (326)
T COG0604 129 TAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADH 190 (326)
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCE
Confidence 77777777211 1 378999999999999999988888854333 6777778 777776644
No 376
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=88.47 E-value=0.43 Score=52.29 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=32.0
Q ss_pred hcCCCCccEEEEeccCccHHHHHHHHHhhcCcEEEec
Q 006722 446 NSIPKGTTQVVLRGALTKVAYAIAFALCQKGIQVVTL 482 (633)
Q Consensus 446 ~~i~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l~ 482 (633)
+.++++..+|.++|++|.+|..+|+.|.++|..|.+.
T Consensus 92 ~~~~~~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~ 128 (374)
T PRK11199 92 KTLNPDLRPVVIVGGKGQLGRLFAKMLTLSGYQVRIL 128 (374)
T ss_pred cccCcccceEEEEcCCChhhHHHHHHHHHCCCeEEEe
Confidence 3445566899999999999999999999999999993
No 377
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=88.33 E-value=1.3 Score=45.83 Aligned_cols=40 Identities=18% Similarity=0.172 Sum_probs=35.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRK 492 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 492 (633)
..|++.||+|.+|.++++.+...|.+|.. ++.++.+.+++
T Consensus 164 ~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 205 (332)
T cd08259 164 DTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKE 205 (332)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 68999999999999999999999999877 77888777744
No 378
>PLN00016 RNA-binding protein; Provisional
Probab=88.20 E-value=0.47 Score=51.37 Aligned_cols=36 Identities=17% Similarity=0.291 Sum_probs=31.4
Q ss_pred CccEEEEe----ccCccHHHHHHHHHhhcCcEEEe--cChhH
Q 006722 451 GTTQVVLR----GALTKVAYAIAFALCQKGIQVVT--LREDE 486 (633)
Q Consensus 451 ~~~~V~~~----Gatgkig~ava~~L~~~~~~v~l--~~~~~ 486 (633)
..++|+|+ ||||-||+.+++.|.++|.+|+. |+++.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~ 92 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP 92 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence 44789999 99999999999999999999988 66543
No 379
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=88.19 E-value=0.44 Score=48.93 Aligned_cols=28 Identities=7% Similarity=0.190 Sum_probs=25.3
Q ss_pred EEEEeccCccHHHHHHHHHhhcC--cEEEe
Q 006722 454 QVVLRGALTKVAYAIAFALCQKG--IQVVT 481 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~--~~v~l 481 (633)
+|+++||||.||+++++.|.++| .+|+.
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~ 30 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIV 30 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEE
Confidence 48999999999999999999886 78876
No 380
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=88.19 E-value=0.91 Score=44.25 Aligned_cols=30 Identities=13% Similarity=0.246 Sum_probs=25.5
Q ss_pred EEEEeccCccHHHHHHHHHhhc-CcEEEe--cC
Q 006722 454 QVVLRGALTKVAYAIAFALCQK-GIQVVT--LR 483 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~-~~~v~l--~~ 483 (633)
.++++|++|+||..+|++|+++ ..++.+ |+
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~ 34 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRS 34 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccC
Confidence 5789999999999999999999 556666 55
No 381
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=88.15 E-value=0.4 Score=52.20 Aligned_cols=127 Identities=13% Similarity=0.134 Sum_probs=70.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCc---EEEe----cChhHHHHHHHHhCCcccc--chhh-hcccCcceE--EEEcCcC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGI---QVVT----LREDEHEKLRKSFGAKSEC--NNLL-LSRSYSQKI--WLVGKGL 520 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~---~v~l----~~~~~~~~l~~~l~~~~~~--~~l~-~~~~~~~~v--w~vg~~~ 520 (633)
.+|+++||||.+|+.+.+.|.+++. ++.. |+.++-... . ..+. ..+. +.. .++|+ ..+|...
T Consensus 8 ~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~--~---~~~~~v~~~~~~~~-~~~D~vf~a~p~~~ 81 (344)
T PLN02383 8 PSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF--E---GRDYTVEELTEDSF-DGVDIALFSAGGSI 81 (344)
T ss_pred CeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee--c---CceeEEEeCCHHHH-cCCCEEEECCCcHH
Confidence 5799999999999999999998643 3332 332221111 1 1111 1111 111 14555 4677776
Q ss_pred CHHHHhhC-CCCceeecccccCCCcccCC-CC-ceeecCcccccCCc-cccccccccCC-Ccchhhh--Hhhhhhhhhcc
Q 006722 521 TEEEQSKA-KKGTIFIPFSQFPPNDKKIR-KD-CMYHLTPAMAVPAA-FENVDSCENWL-PRRVMSA--WRIGGIVHALE 593 (633)
Q Consensus 521 ~~~~q~~a-~~G~~f~~~~~~~~~~~~~R-~d-c~y~~~~a~~~p~~-~~~~~~~e~~~-p~~~~~A--c~a~~~v~alE 593 (633)
+.+--.++ .+|+.+||.| +..| +| +. ..+|+= -+.+..-+..- +++.+.- |.+-+++++|=
T Consensus 82 s~~~~~~~~~~g~~VIDlS------~~fR~~~~~p------~~vPEvn~~~i~~~~~~~~~~~iIanPgC~~t~~~laL~ 149 (344)
T PLN02383 82 SKKFGPIAVDKGAVVVDNS------SAFRMEEGVP------LVIPEVNPEAMKHIKLGKGKGALIANPNCSTIICLMAVT 149 (344)
T ss_pred HHHHHHHHHhCCCEEEECC------chhhcCCCCc------eECCCcCHHHHHhhhhcccCCcEEECCCcHHHHHHHHHH
Confidence 66654444 6799999999 6677 43 33 335551 01111110000 2233333 99999998886
Q ss_pred CCCc
Q 006722 594 GWNE 597 (633)
Q Consensus 594 gw~~ 597 (633)
....
T Consensus 150 PL~~ 153 (344)
T PLN02383 150 PLHR 153 (344)
T ss_pred HHHH
Confidence 6543
No 382
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=88.08 E-value=1.4 Score=45.10 Aligned_cols=99 Identities=16% Similarity=0.115 Sum_probs=60.7
Q ss_pred hHHHHHHhcCCC--CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc---chhh-hcc--c
Q 006722 439 LAVAVVINSIPK--GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC---NNLL-LSR--S 508 (633)
Q Consensus 439 ltaavv~~~i~~--~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~---~~l~-~~~--~ 508 (633)
+||+..++.+-+ .-..|++.||+|.+|.++++.+..+|.+|.. +++++.+.+ +++|+.... ..+. +.. .
T Consensus 128 ~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~ 206 (320)
T cd08243 128 YTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGADEVVIDDGAIAEQLRAAP 206 (320)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEecCccHHHHHHHhC
Confidence 445555544421 2379999999999999999999999999877 778887777 556652211 1111 111 1
Q ss_pred CcceEEE--EcCcCCHHHHhhCCCCceeeccc
Q 006722 509 YSQKIWL--VGKGLTEEEQSKAKKGTIFIPFS 538 (633)
Q Consensus 509 ~~~~vw~--vg~~~~~~~q~~a~~G~~f~~~~ 538 (633)
...++++ +|.....+-.+.++++-+|+.+.
T Consensus 207 ~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g 238 (320)
T cd08243 207 GGFDKVLELVGTATLKDSLRHLRPGGIVCMTG 238 (320)
T ss_pred CCceEEEECCChHHHHHHHHHhccCCEEEEEc
Confidence 1334442 22233334445677777777776
No 383
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=87.97 E-value=1.2 Score=52.38 Aligned_cols=54 Identities=15% Similarity=0.173 Sum_probs=38.9
Q ss_pred eecCChhHHHHHHhcCC--C-------------CccEEEEeccCccHHHHHHHHHhhc-CcEEEe--cChhH
Q 006722 433 VVDGSSLAVAVVINSIP--K-------------GTTQVVLRGALTKVAYAIAFALCQK-GIQVVT--LREDE 486 (633)
Q Consensus 433 vv~Gnsltaavv~~~i~--~-------------~~~~V~~~Gatgkig~ava~~L~~~-~~~v~l--~~~~~ 486 (633)
.-.|..+.++.-+|+.. . ..++|+|+||||=||+.+++.|.++ |.+|+. |+.+.
T Consensus 281 ~~g~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~ 352 (660)
T PRK08125 281 AGDGLYMQGSQLAQELGLVAGARLNSKPACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDA 352 (660)
T ss_pred CCCCCccCHHHHhcCCCCCCCCEecccchhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchh
Confidence 33444566666666632 1 2278999999999999999999986 799987 54443
No 384
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=87.89 E-value=1.4 Score=45.47 Aligned_cols=44 Identities=32% Similarity=0.396 Sum_probs=36.7
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
...|++.|++|.+|.++++.+..+|.+|.+ +++++.+.+ +++|+
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~ 192 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGA 192 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCC
Confidence 357999999999999999877777999877 888888887 45765
No 385
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=87.87 E-value=1 Score=49.08 Aligned_cols=138 Identities=20% Similarity=0.206 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceEEeeC-C-CCc----------ceeecCC----
Q 006722 386 NRLIEEAILEAEEKGAKVISL--G-------LMNQGEELNRYG---GVFVHKH-P-QLK----------MKVVDGS---- 437 (633)
Q Consensus 386 n~~i~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p-~L~----------irvv~Gn---- 437 (633)
+.-+..-++.|++.|++..-. . ++..++++|.|- ++.++.= | +++ .+=|||=
T Consensus 101 ~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDGl~p~N 180 (345)
T PLN02897 101 QTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALRKFNEDTSIHGILVQLPLPQHLDESKILNMVRLEKDVDGFHPLN 180 (345)
T ss_pred HHHHHHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCccCCCHHH
Confidence 344455667788888876543 2 333446677774 3454421 1 221 1223331
Q ss_pred --------------hhHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhCCc
Q 006722 438 --------------SLAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFGAK 497 (633)
Q Consensus 438 --------------sltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~~~ 497 (633)
.-|++.|++=+.. .-++|+|+|.+.=||+-+|..|.++|-.|++ -++
T Consensus 181 ~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~------------- 247 (345)
T PLN02897 181 VGNLAMRGREPLFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAF------------- 247 (345)
T ss_pred HHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCC-------------
Confidence 3466666655433 3389999999999999999999999999999 111
Q ss_pred cccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCC
Q 006722 498 SECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 498 ~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 542 (633)
+.++.+.+ ++|..|..+|+ .++++. .++|+++||+. +.+
T Consensus 248 --T~nl~~~~~~ADIvIsAvGkp~~v~~d~---vk~GavVIDVG-in~ 289 (345)
T PLN02897 248 --TKDPEQITRKADIVIAAAGIPNLVRGSW---LKPGAVVIDVG-TTP 289 (345)
T ss_pred --CCCHHHHHhhCCEEEEccCCcCccCHHH---cCCCCEEEEcc-ccc
Confidence 12334334 33555556664 466665 99999999998 655
No 386
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=87.80 E-value=0.73 Score=49.96 Aligned_cols=90 Identities=14% Similarity=0.118 Sum_probs=50.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhc-CcEEEe--cChhHHHHHHHHhC-Cccc----cchhhhcccCcceEE--EEcCcCCH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQK-GIQVVT--LREDEHEKLRKSFG-AKSE----CNNLLLSRSYSQKIW--LVGKGLTE 522 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~-~~~v~l--~~~~~~~~l~~~l~-~~~~----~~~l~~~~~~~~~vw--~vg~~~~~ 522 (633)
.+|+++||||-+|+.+++.|.++ +.++.. +++++-+.+++..+ .... ...+.+....++|++ ..+.....
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~vD~Vf~alP~~~~~ 82 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPEILAGADVVFLALPHGVSM 82 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHHHhcCCCEEEECCCcHHHH
Confidence 37999999999999999999987 787755 43333223333321 0110 111211111245664 33333222
Q ss_pred HHHh-hCCCCceeecccccCCCcccCC
Q 006722 523 EEQS-KAKKGTIFIPFSQFPPNDKKIR 548 (633)
Q Consensus 523 ~~q~-~a~~G~~f~~~~~~~~~~~~~R 548 (633)
+-=. -+..|.+++|.| ...|
T Consensus 83 ~~v~~a~~aG~~VID~S------~~fR 103 (343)
T PRK00436 83 DLAPQLLEAGVKVIDLS------ADFR 103 (343)
T ss_pred HHHHHHHhCCCEEEECC------cccC
Confidence 2211 236799999999 6666
No 387
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=87.66 E-value=0.6 Score=52.19 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=31.2
Q ss_pred hcCCCCc----cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 446 NSIPKGT----TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 446 ~~i~~~~----~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
..||.|. .+|+|+||||-||+.+++.|.++|.+|..
T Consensus 110 ~~~~~~~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ 149 (436)
T PLN02166 110 GRVPVGIGRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIV 149 (436)
T ss_pred CCCCcccccCCCEEEEECCccHHHHHHHHHHHHCCCEEEE
Confidence 3455555 68999999999999999999999999987
No 388
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=87.59 E-value=1.4 Score=46.18 Aligned_cols=86 Identities=17% Similarity=0.156 Sum_probs=54.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccc-----hhhh----cccCcceEEE--EcCc
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECN-----NLLL----SRSYSQKIWL--VGKG 519 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~-----~l~~----~~~~~~~vw~--vg~~ 519 (633)
..|++.||+|.||.++++.+..+|.+|.. +++++.+.++ ++|+..... ...+ .+....++++ +|..
T Consensus 140 ~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~ 218 (325)
T TIGR02825 140 ETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGE 218 (325)
T ss_pred CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHH
Confidence 68999999999999999988888999876 7888888885 577632111 1111 1111244442 2322
Q ss_pred CCHHHHhhCCCCceeecccc
Q 006722 520 LTEEEQSKAKKGTIFIPFSQ 539 (633)
Q Consensus 520 ~~~~~q~~a~~G~~f~~~~~ 539 (633)
..++--..+.+|-+++.+..
T Consensus 219 ~~~~~~~~l~~~G~iv~~G~ 238 (325)
T TIGR02825 219 FSNTVIGQMKKFGRIAICGA 238 (325)
T ss_pred HHHHHHHHhCcCcEEEEecc
Confidence 22333445777777887763
No 389
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=87.50 E-value=0.54 Score=48.08 Aligned_cols=28 Identities=21% Similarity=0.373 Sum_probs=26.3
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+|+|+||||-||+++++.|.++|.+|..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~ 28 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVA 28 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEE
Confidence 4899999999999999999999999886
No 390
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=87.49 E-value=1.4 Score=47.42 Aligned_cols=97 Identities=18% Similarity=0.176 Sum_probs=73.3
Q ss_pred cceeecCChhHHHHHHhcC--CCCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc----c
Q 006722 430 KMKVVDGSSLAVAVVINSI--PKGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC----N 501 (633)
Q Consensus 430 ~irvv~Gnsltaavv~~~i--~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~----~ 501 (633)
-.-+.-..++||+..+..| ||.-.+|++.||+|.||+++.+.---+|-+|+= -+.|+-.-+.+++|....- .
T Consensus 127 ~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~ 206 (340)
T COG2130 127 YLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE 206 (340)
T ss_pred HHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc
Confidence 3667778899999999999 677799999999999999999977777999887 8899999999998765522 2
Q ss_pred hhhhcc----cCcceEE---EEcCcCCHHHHh
Q 006722 502 NLLLSR----SYSQKIW---LVGKGLTEEEQS 526 (633)
Q Consensus 502 ~l~~~~----~~~~~vw---~vg~~~~~~~q~ 526 (633)
++.+.+ -+.+|+. +-|+.+|.--..
T Consensus 207 d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ 238 (340)
T COG2130 207 DFAQALKEACPKGIDVYFENVGGEVLDAVLPL 238 (340)
T ss_pred cHHHHHHHHCCCCeEEEEEcCCchHHHHHHHh
Confidence 333333 2255664 666666665544
No 391
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=87.37 E-value=0.92 Score=47.49 Aligned_cols=40 Identities=20% Similarity=0.422 Sum_probs=36.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
++|.++|+ |.+|+++|..|+++|.+|++ +++++.++++++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~ 43 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQE 43 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence 57899999 99999999999999999999 899999887764
No 392
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=87.11 E-value=0.5 Score=49.09 Aligned_cols=27 Identities=26% Similarity=0.368 Sum_probs=24.1
Q ss_pred EEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 455 VVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
|+|+||||-||+.+|+.|.++|.++..
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~ 28 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDIL 28 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEE
Confidence 799999999999999999999985444
No 393
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=87.08 E-value=2.3 Score=44.92 Aligned_cols=86 Identities=14% Similarity=0.237 Sum_probs=52.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCc--EEEe--cChhHHHHHHHHhCCcccc-chhhhcccCcceEEEEcCcCCHH----
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGI--QVVT--LREDEHEKLRKSFGAKSEC-NNLLLSRSYSQKIWLVGKGLTEE---- 523 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~l~~~~~~-~~l~~~~~~~~~vw~vg~~~~~~---- 523 (633)
.+|.++| +|.+|+++|+.|.+.|. +|.. |++++.+.+++ .|..... ..+.+... +++++++--.....
T Consensus 7 ~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~-~g~~~~~~~~~~~~~~-~aDvViiavp~~~~~~v~ 83 (307)
T PRK07502 7 DRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARE-LGLGDRVTTSAAEAVK-GADLVILCVPVGASGAVA 83 (307)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHh-CCCCceecCCHHHHhc-CCCEEEECCCHHHHHHHH
Confidence 5799999 89999999999999884 7777 88888877764 3332211 22222221 55665442221110
Q ss_pred H--HhhCCCCceeecccccC
Q 006722 524 E--QSKAKKGTIFIPFSQFP 541 (633)
Q Consensus 524 ~--q~~a~~G~~f~~~~~~~ 541 (633)
+ ...+++|+++++++.+.
T Consensus 84 ~~l~~~l~~~~iv~dvgs~k 103 (307)
T PRK07502 84 AEIAPHLKPGAIVTDVGSVK 103 (307)
T ss_pred HHHHhhCCCCCEEEeCccch
Confidence 1 12357788888876543
No 394
>PLN02206 UDP-glucuronate decarboxylase
Probab=87.01 E-value=0.66 Score=51.97 Aligned_cols=29 Identities=24% Similarity=0.280 Sum_probs=27.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
++|+|+||||-||+.+++.|.++|.+|..
T Consensus 120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ 148 (442)
T PLN02206 120 LRVVVTGGAGFVGSHLVDRLMARGDSVIV 148 (442)
T ss_pred CEEEEECcccHHHHHHHHHHHHCcCEEEE
Confidence 68999999999999999999999999987
No 395
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=86.99 E-value=2.5 Score=42.99 Aligned_cols=43 Identities=23% Similarity=0.251 Sum_probs=37.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
+.|++.|++|.+|.++++.+..+|.+|.+ +++++.+.++ ++|+
T Consensus 146 ~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~ 190 (325)
T cd08253 146 ETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGA 190 (325)
T ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCC
Confidence 78999999999999999999999999888 7788888874 4655
No 396
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=86.88 E-value=5.2 Score=42.27 Aligned_cols=86 Identities=13% Similarity=0.158 Sum_probs=55.1
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhCCccccc----hhh----hcccCcceEE--EEcC-c
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT-LREDEHEKLRKSFGAKSECN----NLL----LSRSYSQKIW--LVGK-G 519 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~~~~~~~----~l~----~~~~~~~~vw--~vg~-~ 519 (633)
.++|++.|++|.+|.++++.+..+|.++.. .+.++.+.+ +++|...... .+. +.+....+++ .+|. .
T Consensus 155 ~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~ 233 (339)
T cd08249 155 GKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASPKNFDLV-KSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPE 233 (339)
T ss_pred CCEEEEEcChhHHHHHHHHHHHHcCCeEEEEECcccHHHH-HhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccch
Confidence 379999999999999999998888999887 556787777 5576532111 111 1111133444 3332 3
Q ss_pred CCHHHHhhCCC--Cceeeccc
Q 006722 520 LTEEEQSKAKK--GTIFIPFS 538 (633)
Q Consensus 520 ~~~~~q~~a~~--G~~f~~~~ 538 (633)
.-++-.+.+++ |..++.+.
T Consensus 234 ~~~~~~~~l~~~~~g~~v~~g 254 (339)
T cd08249 234 SAQLCAEALGRSGGGKLVSLL 254 (339)
T ss_pred HHHHHHHHHhccCCCEEEEec
Confidence 33344556777 77788776
No 397
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=86.86 E-value=0.97 Score=47.69 Aligned_cols=42 Identities=21% Similarity=0.249 Sum_probs=35.8
Q ss_pred CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 451 GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 451 ~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+.++|.|+|+ |.+|+.+|..|++.|.+|++ ++++.+++.+++
T Consensus 4 ~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~ 47 (286)
T PRK07819 4 AIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNR 47 (286)
T ss_pred CccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence 3468999998 89999999999999999999 888888774433
No 398
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=86.83 E-value=0.72 Score=50.06 Aligned_cols=43 Identities=21% Similarity=0.305 Sum_probs=40.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
....+.||||=.|.-||++||++|.+-.| ||.++++.|.++||
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG 51 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG 51 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC
Confidence 46789999999999999999999999988 99999999999994
No 399
>PRK13243 glyoxylate reductase; Reviewed
Probab=86.63 E-value=1.7 Score=46.96 Aligned_cols=81 Identities=15% Similarity=0.142 Sum_probs=53.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEEEEc--------CcCCH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIWLVG--------KGLTE 522 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw~vg--------~~~~~ 522 (633)
++|.++|- |.||+.+|+.|..-|.+|.. |+.+.. ...+.|... ..+.+..+ ++|++++- ..++.
T Consensus 151 ktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~~~~~--~~l~ell~-~aDiV~l~lP~t~~T~~~i~~ 224 (333)
T PRK13243 151 KTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE--AEKELGAEY--RPLEELLR-ESDFVSLHVPLTKETYHMINE 224 (333)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh--hHHHcCCEe--cCHHHHHh-hCCEEEEeCCCChHHhhccCH
Confidence 78889987 99999999999988999988 443321 223333221 23333331 34444222 33455
Q ss_pred HHHhhCCCCceeecccc
Q 006722 523 EEQSKAKKGTIFIPFSQ 539 (633)
Q Consensus 523 ~~q~~a~~G~~f~~~~~ 539 (633)
+.-..+++|++++.++|
T Consensus 225 ~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 225 ERLKLMKPTAILVNTAR 241 (333)
T ss_pred HHHhcCCCCeEEEECcC
Confidence 77788999999999999
No 400
>COG4693 PchG Oxidoreductase (NAD-binding), involved in siderophore biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=86.63 E-value=0.53 Score=49.90 Aligned_cols=52 Identities=27% Similarity=0.383 Sum_probs=42.5
Q ss_pred HhcCCCCc--cEEEEeccC-ccHHHHHHHHHhhcCcEEEe------cChhHHHHHHHHhCC
Q 006722 445 INSIPKGT--TQVVLRGAL-TKVAYAIAFALCQKGIQVVT------LREDEHEKLRKSFGA 496 (633)
Q Consensus 445 ~~~i~~~~--~~V~~~Gat-gkig~ava~~L~~~~~~v~l------~~~~~~~~l~~~l~~ 496 (633)
.+++|.|. +-|+|.++. |+-|+++|++|-+||+.|+- ++-.++.+|.++.|.
T Consensus 57 ~eelpd~idiACVvVrsai~Gg~Gs~larall~RGi~VlqEHPl~p~di~~l~rlA~rqG~ 117 (361)
T COG4693 57 VEELPDDIDIACVVVRSAIVGGQGSALARALLARGIHVLQEHPLHPRDIQDLLRLAERQGR 117 (361)
T ss_pred HhhCCCCCCeEEEEEeeeeecCCcHHHHHHHHHcccHHHHhCCCCHHHHHHHHHHHHHhCc
Confidence 45666644 788888888 99999999999999999987 777788888888754
No 401
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=86.51 E-value=0.91 Score=49.33 Aligned_cols=88 Identities=14% Similarity=0.157 Sum_probs=50.6
Q ss_pred EEEEeccCccHHHHHHHHHhhc-CcEEE-e--cChhHHHHHHHHhCC-cc--c--cc--hhhhcccCcceEE--EEcCcC
Q 006722 454 QVVLRGALTKVAYAIAFALCQK-GIQVV-T--LREDEHEKLRKSFGA-KS--E--CN--NLLLSRSYSQKIW--LVGKGL 520 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~-~~~v~-l--~~~~~~~~l~~~l~~-~~--~--~~--~l~~~~~~~~~vw--~vg~~~ 520 (633)
+|+++||||-+|+.+++.|.+. ++++. + ++++.=+.+.+..+. .. + .. ...+.. .++|++ .++...
T Consensus 2 kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~DvVf~alP~~~ 80 (346)
T TIGR01850 2 KVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIA-EDADVVFLALPHGV 80 (346)
T ss_pred EEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhh-cCCCEEEECCCchH
Confidence 6899999999999999999987 88877 4 222121223222210 01 0 01 111111 145664 445554
Q ss_pred CHHHHhh-CCCCceeecccccCCCcccCC
Q 006722 521 TEEEQSK-AKKGTIFIPFSQFPPNDKKIR 548 (633)
Q Consensus 521 ~~~~q~~-a~~G~~f~~~~~~~~~~~~~R 548 (633)
..+-=.. +..|.++||.| ...|
T Consensus 81 s~~~~~~~~~~G~~VIDlS------~~fR 103 (346)
T TIGR01850 81 SAELAPELLAAGVKVIDLS------ADFR 103 (346)
T ss_pred HHHHHHHHHhCCCEEEeCC------hhhh
Confidence 4443222 46899999999 6677
No 402
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=86.50 E-value=0.96 Score=48.09 Aligned_cols=38 Identities=13% Similarity=0.201 Sum_probs=30.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhc-CcEEEe--cChhHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQK-GIQVVT--LREDEHEKL 490 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~-~~~v~l--~~~~~~~~l 490 (633)
++|+|+||||=||+.+|+.|.++ |.+|.. |+.++...+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~ 42 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDL 42 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh
Confidence 46999999999999999999886 788886 655544433
No 403
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=86.26 E-value=3.3 Score=41.98 Aligned_cols=84 Identities=15% Similarity=0.124 Sum_probs=51.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcE-EEe--cChhHHHHHHHHhCCccccchhhh-cc-cCcceEEEE--c-CcCCHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQ-VVT--LREDEHEKLRKSFGAKSECNNLLL-SR-SYSQKIWLV--G-KGLTEEE 524 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~l~~~~~~~~l~~-~~-~~~~~vw~v--g-~~~~~~~ 524 (633)
.+|++.| .|.+|.++++.+..+|.+ |.. +++++.+ +.+++|.....-...+ .+ ....++++- | ....++-
T Consensus 99 ~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~ 176 (277)
T cd08255 99 ERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRE-LAEALGPADPVAADTADEIGGRGADVVIEASGSPSALETA 176 (277)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHH-HHHHcCCCccccccchhhhcCCCCCEEEEccCChHHHHHH
Confidence 6788887 599999999999888988 666 6778877 6666652222111111 11 113444432 2 1222334
Q ss_pred HhhCCCCceeeccc
Q 006722 525 QSKAKKGTIFIPFS 538 (633)
Q Consensus 525 q~~a~~G~~f~~~~ 538 (633)
.+.+++|..++.+.
T Consensus 177 ~~~l~~~g~~~~~g 190 (277)
T cd08255 177 LRLLRDRGRVVLVG 190 (277)
T ss_pred HHHhcCCcEEEEEe
Confidence 45678888888876
No 404
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=86.04 E-value=4.3 Score=44.17 Aligned_cols=153 Identities=16% Similarity=0.146 Sum_probs=88.6
Q ss_pred HcCCcEEEecccccc-cccccCCceEEeeCCC--CcceeecCChhHH-------HHHHhcC-CCCccEEEEeccCccHHH
Q 006722 398 EKGAKVISLGLMNQG-EELNRYGGVFVHKHPQ--LKMKVVDGSSLAV-------AVVINSI-PKGTTQVVLRGALTKVAY 466 (633)
Q Consensus 398 k~G~kv~~LG~ln~~-e~ln~~g~~~~~k~p~--L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatgkig~ 466 (633)
-.|+|+++ |-.... ..|..--++.+--+|. ..+-+.||+.+|+ |++.+-+ ++|++.+.++|+ |..++
T Consensus 66 ~~gvK~v~-~~p~N~~~glp~v~g~~~L~d~~TG~plal~d~~~lTa~RTaAasavAa~~LA~~da~~laiIGa-G~qA~ 143 (330)
T COG2423 66 VAGVKIVG-VHPDNPARGLPTVSGVIVLFDAETGEPLALLDATRLTALRTAAASAVAAKYLARKDASTLAIIGA-GAQAR 143 (330)
T ss_pred eEEEEEec-CcCCccccCCCcceEEEEEEecCCCCEEEEecCccHHHHHHHHHHHHHHHHhccCCCcEEEEECC-cHHHH
Confidence 35666666 222211 2333333334433333 3488999999985 3455555 668999999996 78999
Q ss_pred HHHHHHhhc--CcEEEe--cChhHHHHHHHHhCCcccc-------chhhhcccCcceEEE-----EcCcCCHHHHhhCCC
Q 006722 467 AIAFALCQK--GIQVVT--LREDEHEKLRKSFGAKSEC-------NNLLLSRSYSQKIWL-----VGKGLTEEEQSKAKK 530 (633)
Q Consensus 467 ava~~L~~~--~~~v~l--~~~~~~~~l~~~l~~~~~~-------~~l~~~~~~~~~vw~-----vg~~~~~~~q~~a~~ 530 (633)
.-++++++- -.++.+ |+++.-+++.+.+ .+.. +++.++.+ .+||++ -.-.++.+ |++|
T Consensus 144 ~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l--~~~~~~~v~a~~s~~~av~-~aDiIvt~T~s~~Pil~~~---~l~~ 217 (330)
T COG2423 144 TQLEALKAVRDIREIRVYSRDPEAAEAFAARL--RKRGGEAVGAADSAEEAVE-GADIVVTATPSTEPVLKAE---WLKP 217 (330)
T ss_pred HHHHHHHhhCCccEEEEEcCCHHHHHHHHHHH--HhhcCccceeccCHHHHhh-cCCEEEEecCCCCCeecHh---hcCC
Confidence 999999954 444445 8888888877664 2211 22222221 344431 11222333 5889
Q ss_pred CceeecccccCCCcccCC------CCceeecCcc
Q 006722 531 GTIFIPFSQFPPNDKKIR------KDCMYHLTPA 558 (633)
Q Consensus 531 G~~f~~~~~~~~~~~~~R------~dc~y~~~~a 558 (633)
|+|+.-+....|.+.|+= -||.+-+.+.
T Consensus 218 G~hI~aiGad~p~k~Eld~e~l~ra~~vvvD~~~ 251 (330)
T COG2423 218 GTHINAIGADAPGKRELDPEVLARADRVVVDSLE 251 (330)
T ss_pred CcEEEecCCCCcccccCCHHHHHhcCeEEEcCHH
Confidence 999999886444444442 3455554443
No 405
>PLN02996 fatty acyl-CoA reductase
Probab=85.99 E-value=1.5 Score=49.73 Aligned_cols=23 Identities=13% Similarity=0.134 Sum_probs=21.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhc
Q 006722 453 TQVVLRGALTKVAYAIAFALCQK 475 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~ 475 (633)
+.|+|+||||-||+++++.|.+.
T Consensus 12 k~VlvTGaTGFlG~~ll~~LL~~ 34 (491)
T PLN02996 12 KTILVTGATGFLAKIFVEKILRV 34 (491)
T ss_pred CeEEEeCCCcHHHHHHHHHHHhh
Confidence 68999999999999999998875
No 406
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=85.98 E-value=4.1 Score=45.62 Aligned_cols=104 Identities=17% Similarity=0.130 Sum_probs=66.6
Q ss_pred ceeecCChhHHHHHHhcCCC--CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhc
Q 006722 431 MKVVDGSSLAVAVVINSIPK--GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLS 506 (633)
Q Consensus 431 irvv~Gnsltaavv~~~i~~--~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~ 506 (633)
-|.=+|.|. .-.+++.+.. .-++|+|+|+ |.||+.+|+.+...|.+|++ +++.|.+.. .+.|+... .+.+.
T Consensus 180 n~~g~g~s~-~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A-~~~G~~~~--~~~e~ 254 (413)
T cd00401 180 NLYGCRESL-IDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA-AMEGYEVM--TMEEA 254 (413)
T ss_pred ccchhchhh-HHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH-HhcCCEEc--cHHHH
Confidence 455567774 3445554433 2378888886 58999999999999999988 777787654 44555222 22222
Q ss_pred ccCcceEE--EEc--CcCCHHHHhhCCCCceeeccccc
Q 006722 507 RSYSQKIW--LVG--KGLTEEEQSKAKKGTIFIPFSQF 540 (633)
Q Consensus 507 ~~~~~~vw--~vg--~~~~~~~q~~a~~G~~f~~~~~~ 540 (633)
.. .+|++ ..| ..++.+....+++|.+++-+..+
T Consensus 255 v~-~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~ 291 (413)
T cd00401 255 VK-EGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF 291 (413)
T ss_pred Hc-CCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 21 34554 334 23455557789999999888753
No 407
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=85.92 E-value=1.2 Score=46.37 Aligned_cols=39 Identities=23% Similarity=0.306 Sum_probs=35.0
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+|.++|+ |.+|.++|..|++.|.+|++ |++++++.++++
T Consensus 2 ~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~ 42 (304)
T PRK06522 2 KIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNEN 42 (304)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHc
Confidence 5889997 99999999999999999998 778999988875
No 408
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=85.91 E-value=2.5 Score=45.67 Aligned_cols=79 Identities=13% Similarity=0.143 Sum_probs=50.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEEEEcCcCC--------H
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIWLVGKGLT--------E 522 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw~vg~~~~--------~ 522 (633)
++|.++|. |.||+++|+.|...|.+|.. ++.+..... + .....+.++.+ ++|++++--..+ .
T Consensus 147 ~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~---~---~~~~~l~ell~-~aDiVil~lP~t~~t~~li~~ 218 (330)
T PRK12480 147 MTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDF---L---TYKDSVKEAIK-DADIISLHVPANKESYHLFDK 218 (330)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhh---h---hccCCHHHHHh-cCCEEEEeCCCcHHHHHHHhH
Confidence 57888875 89999999999999999999 444331111 1 11113333332 344543323333 4
Q ss_pred HHHhhCCCCceeecccc
Q 006722 523 EEQSKAKKGTIFIPFSQ 539 (633)
Q Consensus 523 ~~q~~a~~G~~f~~~~~ 539 (633)
+.-.++++|++++.++|
T Consensus 219 ~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 219 AMFDHVKKGAILVNAAR 235 (330)
T ss_pred HHHhcCCCCcEEEEcCC
Confidence 55667899999999999
No 409
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=85.89 E-value=0.34 Score=52.51 Aligned_cols=128 Identities=20% Similarity=0.256 Sum_probs=68.0
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcE---EEe--cChhHHHHHHHHhCCccccchhh-hcccCcceE--EEEcCcCCHHHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQ---VVT--LREDEHEKLRKSFGAKSECNNLL-LSRSYSQKI--WLVGKGLTEEEQ 525 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~---v~l--~~~~~~~~l~~~l~~~~~~~~l~-~~~~~~~~v--w~vg~~~~~~~q 525 (633)
+|+++||||.+|+.+.+.|.+++.. +.. ++++.=+.+.-. |.......+. +.. .++++ ...|...+.+-=
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~-~~~~~~~~~~~~~~-~~~D~v~~a~g~~~s~~~a 78 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFK-GKELEVNEAKIESF-EGIDIALFSAGGSVSKEFA 78 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeC-CeeEEEEeCChHHh-cCCCEEEECCCHHHHHHHH
Confidence 4899999999999999999986444 332 332221122111 1000001111 111 13444 466777666654
Q ss_pred hhC-CCCceeecccccCCCcccCC--CCceeecCcccccCCccccccccccCCCcchhhh--HhhhhhhhhccCCCc
Q 006722 526 SKA-KKGTIFIPFSQFPPNDKKIR--KDCMYHLTPAMAVPAAFENVDSCENWLPRRVMSA--WRIGGIVHALEGWNE 597 (633)
Q Consensus 526 ~~a-~~G~~f~~~~~~~~~~~~~R--~dc~y~~~~a~~~p~~~~~~~~~e~~~p~~~~~A--c~a~~~v~alEgw~~ 597 (633)
.++ .+|+.+||.| ...| +|+- +.+|+ ++ -+.-.....++.++. |.+-+++++|--...
T Consensus 79 ~~~~~~G~~VID~s------s~~R~~~~~p------~~vpe-vN-~~~i~~~~~~~iianp~C~~t~~~l~l~pL~~ 141 (339)
T TIGR01296 79 PKAAKCGAIVIDNT------SAFRMDPDVP------LVVPE-VN-LEDLKEFNTKGIIANPNCSTIQMVVVLKPLHD 141 (339)
T ss_pred HHHHHCCCEEEECC------HHHhCCCCCC------EEeCC-cC-HHHHhhCccCCEEECCCcHHHHHHHHHHHHHH
Confidence 444 6799999998 5555 3432 44565 21 111111111223333 999999888765544
No 410
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=85.77 E-value=1.8 Score=40.97 Aligned_cols=41 Identities=29% Similarity=0.417 Sum_probs=33.1
Q ss_pred EEEEeccCccHHHHHHHHHhhcC--cEEEe--cChhHHHHHHHHh
Q 006722 454 QVVLRGALTKVAYAIAFALCQKG--IQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~--~~v~l--~~~~~~~~l~~~l 494 (633)
+|.++||+|.||+++|..|++++ -++.| +++++.+-...++
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl 46 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDL 46 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhh
Confidence 78999999999999999999884 45665 7777777666665
No 411
>PLN03139 formate dehydrogenase; Provisional
Probab=85.74 E-value=2.1 Score=47.52 Aligned_cols=100 Identities=18% Similarity=0.196 Sum_probs=62.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEEEEcCc--------CCH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIWLVGKG--------LTE 522 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw~vg~~--------~~~ 522 (633)
++|.++| .|.||+++|+.|..-|.+|.. ++..+- +..++.|.... ..+.++.+ .+|++++--. ++.
T Consensus 200 ktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~-~~~~~~g~~~~-~~l~ell~-~sDvV~l~lPlt~~T~~li~~ 275 (386)
T PLN03139 200 KTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDP-ELEKETGAKFE-EDLDAMLP-KCDVVVINTPLTEKTRGMFNK 275 (386)
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcch-hhHhhcCceec-CCHHHHHh-hCCEEEEeCCCCHHHHHHhCH
Confidence 7899999 799999999999988999988 332221 22233333221 23444442 3455433222 345
Q ss_pred HHHhhCCCCceeecccc---cCCCc-------ccCC---CCceeecC
Q 006722 523 EEQSKAKKGTIFIPFSQ---FPPND-------KKIR---KDCMYHLT 556 (633)
Q Consensus 523 ~~q~~a~~G~~f~~~~~---~~~~~-------~~~R---~dc~y~~~ 556 (633)
+.-.++++|++++.++| ++.+- .+++ -|++.++-
T Consensus 276 ~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~l~GAaLDV~~~EP 322 (386)
T PLN03139 276 ERIAKMKKGVLIVNNARGAIMDTQAVADACSSGHIGGYGGDVWYPQP 322 (386)
T ss_pred HHHhhCCCCeEEEECCCCchhhHHHHHHHHHcCCceEEEEcCCCCCC
Confidence 56678999999999999 33221 1244 68887773
No 412
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=85.73 E-value=1.4 Score=46.23 Aligned_cols=41 Identities=24% Similarity=0.394 Sum_probs=35.5
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
.++|.++|+ |-+|+++|..|++.|.+|++ ++++.+++.++.
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKER 45 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 367999996 99999999999999999999 888888777654
No 413
>cd03514 CrtR_beta-carotene-hydroxylase Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae. Carotenoids are important natural pigments; zeaxanthin and lutein are the only dietary carotenoids that accumulate in the macular region of the retina and lens. It is proposed that these carotenoids protect ocular tissues against photooxidative damage. CrtR does not show overall amino acid sequence similarity to the beta-carotene hydroxylases similar to CrtZ, an astaxanthin biosynthetic beta-carotene hydroxylase. However, CrtR does show sequence similarity to the green alga, Haematococcus pluvialis, beta-carotene ketolase (CrtW), which converts beta-carotene to canthaxanthin. Sequences of the CrtR_beta-carotene-hydroxylase domain family, as well as, the CrtW_beta-carotene-ketolase domain family appear to be structurally related
Probab=85.70 E-value=8.9 Score=38.68 Aligned_cols=45 Identities=20% Similarity=0.205 Sum_probs=25.5
Q ss_pred HHhhcccccceecccc-c-cccCC-CcccccCCchhHHHhhcCCCCCc
Q 006722 215 FMNNMGHCNFELMPSC-L-LTNFP-PLKYLAYTASFHSLHHTQFRTNY 259 (633)
Q Consensus 215 ~~~~~~Hsg~e~~P~~-~-~~~~p-~Lk~li~tp~~H~lHH~~~~~NY 259 (633)
+.....|.+.+--+++ . ....+ ++.++...-.+|..||...+..+
T Consensus 141 ~~~~~~H~~~~~~~~~~~~~~~~~~l~~~l~~~~nyH~~HHL~P~IP~ 188 (207)
T cd03514 141 FFDWLPHHPFEETQRWDNSRVYPSKLLNPLIMGQNYHLVHHLWPSIPW 188 (207)
T ss_pred HheeeCccCCCCccchhhhhcccchhHheeecCCchhHHHhCCCCCch
Confidence 4456678765421111 0 11112 34666666789999999977544
No 414
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=85.64 E-value=1.3 Score=44.41 Aligned_cols=42 Identities=26% Similarity=0.317 Sum_probs=38.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l 494 (633)
..|.++||.-+||+++|+.|++-|-+|+- |+++.+++|-+|-
T Consensus 8 ~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~ 51 (245)
T KOG1207|consen 8 VIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET 51 (245)
T ss_pred eEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC
Confidence 56889999999999999999999999998 9999999998873
No 415
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=85.64 E-value=1.1 Score=49.42 Aligned_cols=41 Identities=22% Similarity=0.421 Sum_probs=36.5
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
+|+++|+ |.+|+++|+.|+++|.+|++ +++++.++++++.|
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~ 44 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLD 44 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcC
Confidence 6899998 99999999999999999998 88999999877543
No 416
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.60 E-value=2.2 Score=45.70 Aligned_cols=142 Identities=19% Similarity=0.234 Sum_probs=90.9
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceEEeeC-C-CCcc----------eeecCC
Q 006722 382 NESINRLIEEAILEAEEKGAKVISL--G-------LMNQGEELNRYG---GVFVHKH-P-QLKM----------KVVDGS 437 (633)
Q Consensus 382 ~~~in~~i~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p-~L~i----------rvv~Gn 437 (633)
+.+-+.-++..++.|++.|+++.-. . +++.++++|.|- ++.++.= | +++. +=|||=
T Consensus 42 d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl 121 (295)
T PRK14174 42 DPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGF 121 (295)
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccccccc
Confidence 3344555566778899999987644 3 444457888884 4555431 1 3321 113332
Q ss_pred h------------------hHHHHHHhcCCC-----CccEEEEeccCccHHHHHHHHHhh----cCcEEEe-cChhHHHH
Q 006722 438 S------------------LAVAVVINSIPK-----GTTQVVLRGALTKVAYAIAFALCQ----KGIQVVT-LREDEHEK 489 (633)
Q Consensus 438 s------------------ltaavv~~~i~~-----~~~~V~~~Gatgkig~ava~~L~~----~~~~v~l-~~~~~~~~ 489 (633)
+ -|++.|++=+.. .-++|+++|.+.=||+-+|..|.+ ++..|++ .++.
T Consensus 122 ~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t---- 197 (295)
T PRK14174 122 HPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSAT---- 197 (295)
T ss_pred ChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCc----
Confidence 2 577777766653 338999999999999999999987 6888888 1111
Q ss_pred HHHHhCCccccchhhhcc-cCcceEEEEcC--cCCHHHHhhCCCCceeecccccCC
Q 006722 490 LRKSFGAKSECNNLLLSR-SYSQKIWLVGK--GLTEEEQSKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 490 l~~~l~~~~~~~~l~~~~-~~~~~vw~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 542 (633)
.++.+.+ .+|..|..+|+ .++++. .++|++++|++ ++.
T Consensus 198 -----------~~l~~~~~~ADIvI~Avg~~~li~~~~---vk~GavVIDVg-i~~ 238 (295)
T PRK14174 198 -----------KDIPSYTRQADILIAAIGKARFITADM---VKPGAVVIDVG-INR 238 (295)
T ss_pred -----------hhHHHHHHhCCEEEEecCccCccCHHH---cCCCCEEEEee-ccc
Confidence 1233333 22444445553 466655 89999999998 665
No 417
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=85.50 E-value=3.3 Score=45.81 Aligned_cols=109 Identities=19% Similarity=0.296 Sum_probs=67.5
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh------------------CCccccchhhhcccCcceE
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF------------------GAKSECNNLLLSRSYSQKI 513 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l------------------~~~~~~~~l~~~~~~~~~v 513 (633)
+|.++| +|.+|.++|..|+++|.+|+. +++++.+.|++.. |.-.......++.+ ++++
T Consensus 2 kI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~-~adv 79 (411)
T TIGR03026 2 KIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIR-DADV 79 (411)
T ss_pred EEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHh-hCCE
Confidence 478887 589999999999999999999 8899988887531 00000011111111 3444
Q ss_pred --EEEcCcCC-----------H-HHH--hhCCCCceeecccccCCCcc-cC-----------C--CCceeecCcccccCC
Q 006722 514 --WLVGKGLT-----------E-EEQ--SKAKKGTIFIPFSQFPPNDK-KI-----------R--KDCMYHLTPAMAVPA 563 (633)
Q Consensus 514 --w~vg~~~~-----------~-~~q--~~a~~G~~f~~~~~~~~~~~-~~-----------R--~dc~y~~~~a~~~p~ 563 (633)
..|++... . -++ ..+++|++++.-|-+||... ++ | .||.+..+|..--|+
T Consensus 80 vii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~~~g~~~~~d~~v~~~Pe~~~~G 159 (411)
T TIGR03026 80 IIICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILERASGLKLGEDFYLAYNPEFLREG 159 (411)
T ss_pred EEEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHhhcCCCCCCCceEEECCCcCCCC
Confidence 46665432 1 111 24689999999988877641 11 1 466667777665565
Q ss_pred c
Q 006722 564 A 564 (633)
Q Consensus 564 ~ 564 (633)
.
T Consensus 160 ~ 160 (411)
T TIGR03026 160 N 160 (411)
T ss_pred C
Confidence 4
No 418
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=85.46 E-value=1.2 Score=48.28 Aligned_cols=40 Identities=25% Similarity=0.294 Sum_probs=30.2
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCc-EEEe--cChhHHHHHHH
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGI-QVVT--LREDEHEKLRK 492 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~-~v~l--~~~~~~~~l~~ 492 (633)
.++|+++|+ |++|+.+|.+|++.|+ ++++ .+.-+..+|++
T Consensus 24 ~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~R 66 (339)
T PRK07688 24 EKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQR 66 (339)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCc
Confidence 378999999 8999999999999999 6666 44333333333
No 419
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=85.33 E-value=1.5 Score=46.05 Aligned_cols=41 Identities=15% Similarity=0.185 Sum_probs=35.0
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
.++|.++|+ |.+|+++|..|+++|.+|++ +++++.++.+++
T Consensus 3 i~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (291)
T PRK06035 3 IKVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKNAMEL 45 (291)
T ss_pred CcEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 367999997 88999999999999999999 888888765543
No 420
>PLN02503 fatty acyl-CoA reductase 2
Probab=85.26 E-value=1.8 Score=50.60 Aligned_cols=24 Identities=13% Similarity=0.145 Sum_probs=22.2
Q ss_pred ccEEEEeccCccHHHHHHHHHhhc
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQK 475 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~ 475 (633)
-+.|||+||||=+|+++++.|.+.
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~ 142 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRT 142 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHh
Confidence 389999999999999999999875
No 421
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=85.10 E-value=1.5 Score=45.89 Aligned_cols=40 Identities=23% Similarity=0.238 Sum_probs=35.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
++|.++|+ |.+|+++|..|+++|.+|++ +++++.++.+++
T Consensus 5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (292)
T PRK07530 5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLAT 46 (292)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence 57999997 89999999999999999999 888888775543
No 422
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=85.00 E-value=0.87 Score=47.04 Aligned_cols=27 Identities=19% Similarity=0.442 Sum_probs=24.4
Q ss_pred EEEeccCccHHHHHHHHHhhcCc-EEEe
Q 006722 455 VVLRGALTKVAYAIAFALCQKGI-QVVT 481 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~-~v~l 481 (633)
|+++||||-||+.+|+.|.++|. +|..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~ 28 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILV 28 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEE
Confidence 68999999999999999999997 5665
No 423
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=84.80 E-value=2.5 Score=43.85 Aligned_cols=84 Identities=20% Similarity=0.140 Sum_probs=52.6
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc--ch---hh-hcccCcceEE--EEcCcCCHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC--NN---LL-LSRSYSQKIW--LVGKGLTEE 523 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~--~~---l~-~~~~~~~~vw--~vg~~~~~~ 523 (633)
.|++.|++|.+|.++++.+..+|.++.. +++++.+.+ +++|..... +. .+ ..+....+++ .+|.....+
T Consensus 148 ~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~ 226 (323)
T TIGR02823 148 PVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYL-KELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGHTLAN 226 (323)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HhcCCcEEEccccHHHHHHHhcCCCceEEEECccHHHHHH
Confidence 8999999999999999999899999876 667777777 567652211 11 01 1111123333 222222233
Q ss_pred HHhhCCCCceeeccc
Q 006722 524 EQSKAKKGTIFIPFS 538 (633)
Q Consensus 524 ~q~~a~~G~~f~~~~ 538 (633)
--..+++|-+|+.+.
T Consensus 227 ~~~~l~~~G~~v~~g 241 (323)
T TIGR02823 227 VLAQLKYGGAVAACG 241 (323)
T ss_pred HHHHhCCCCEEEEEc
Confidence 345577888888886
No 424
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=84.75 E-value=1.9 Score=44.59 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=37.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
..|++.||+|.+|.++++.+..+|.++.. +++++.+.++ ++|.
T Consensus 142 ~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~ 186 (334)
T PTZ00354 142 QSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAA 186 (334)
T ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCC
Confidence 68999999999999999999999998766 8889988885 5665
No 425
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=84.72 E-value=2.8 Score=43.35 Aligned_cols=44 Identities=32% Similarity=0.408 Sum_probs=37.9
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
.+.|++.||+|.+|.++++....+|.++.. .++++.+.+ +++|+
T Consensus 147 ~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~-~~~g~ 192 (324)
T cd08288 147 DGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYL-RSLGA 192 (324)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCC
Confidence 368999999999999999988888999877 778888888 56776
No 426
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=84.41 E-value=2.1 Score=43.32 Aligned_cols=84 Identities=19% Similarity=0.144 Sum_probs=52.8
Q ss_pred CccEEEEeccCccHHHHHHHHHhhcCcEEEec--ChhHH----HHHHHHhCCc-ccc-chhhhcc-cCcceEEEEcCc--
Q 006722 451 GTTQVVLRGALTKVAYAIAFALCQKGIQVVTL--REDEH----EKLRKSFGAK-SEC-NNLLLSR-SYSQKIWLVGKG-- 519 (633)
Q Consensus 451 ~~~~V~~~Gatgkig~ava~~L~~~~~~v~l~--~~~~~----~~l~~~l~~~-~~~-~~l~~~~-~~~~~vw~vg~~-- 519 (633)
.-++|+++|.+.=||+-+|..|.++|-.|++- +...+ +.++.+- -+ ++. .++.+.+ ++|+.|..+|+-
T Consensus 61 ~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~-t~~~~~~~~l~~~~~~ADIVIsAvG~~~~ 139 (197)
T cd01079 61 YGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEK-HHVTDEEAMTLDCLSQSDVVITGVPSPNY 139 (197)
T ss_pred CCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCccccccccccccccc-ccccchhhHHHHHhhhCCEEEEccCCCCC
Confidence 33899999999999999999999999999882 11000 0000000 00 010 1144444 445555666653
Q ss_pred -CCHHHHhhCCCCceeeccc
Q 006722 520 -LTEEEQSKAKKGTIFIPFS 538 (633)
Q Consensus 520 -~~~~~q~~a~~G~~f~~~~ 538 (633)
++++ +.++|+++||+.
T Consensus 140 ~i~~d---~ik~GavVIDVG 156 (197)
T cd01079 140 KVPTE---LLKDGAICINFA 156 (197)
T ss_pred ccCHH---HcCCCcEEEEcC
Confidence 4544 599999999998
No 427
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=84.35 E-value=2.1 Score=36.84 Aligned_cols=30 Identities=37% Similarity=0.398 Sum_probs=26.3
Q ss_pred CccEEEEeccCccHHHHHHHHHhhc-CcEEEe
Q 006722 451 GTTQVVLRGALTKVAYAIAFALCQK-GIQVVT 481 (633)
Q Consensus 451 ~~~~V~~~Gatgkig~ava~~L~~~-~~~v~l 481 (633)
..+++.++|+ |.+|+.++++|++. +.++.+
T Consensus 22 ~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v 52 (86)
T cd05191 22 KGKTVVVLGA-GEVGKGIAKLLADEGGKKVVL 52 (86)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE
Confidence 3478999999 99999999999998 677777
No 428
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=84.35 E-value=3.3 Score=43.49 Aligned_cols=82 Identities=16% Similarity=0.222 Sum_probs=51.4
Q ss_pred EEEEeccCccHHHHHHHHHhhcCc----EEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEE--EE-----cCcC
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGI----QVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIW--LV-----GKGL 520 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~----~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw--~v-----g~~~ 520 (633)
+|.++| +|.+|.++++.|.++|. ++.. |++++.++++++.|.. ...+..+..+ ++|++ .| .+.+
T Consensus 4 ~IgfIG-~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~-~~~~~~e~~~-~aDiIiLavkP~~~~~vl 80 (272)
T PRK12491 4 QIGFIG-CGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGIT-ITTNNNEVAN-SADILILSIKPDLYSSVI 80 (272)
T ss_pred eEEEEC-ccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcE-EeCCcHHHHh-hCCEEEEEeChHHHHHHH
Confidence 688898 89999999999998874 5666 8899999988876532 2222223221 34443 22 1112
Q ss_pred CHHHHhhCCCCceeecccc
Q 006722 521 TEEEQSKAKKGTIFIPFSQ 539 (633)
Q Consensus 521 ~~~~q~~a~~G~~f~~~~~ 539 (633)
+ +=...+++|++++++.-
T Consensus 81 ~-~l~~~~~~~~lvISi~A 98 (272)
T PRK12491 81 N-QIKDQIKNDVIVVTIAA 98 (272)
T ss_pred H-HHHHhhcCCcEEEEeCC
Confidence 1 11112567888888874
No 429
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=84.33 E-value=2.7 Score=40.69 Aligned_cols=87 Identities=23% Similarity=0.180 Sum_probs=56.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccc-------------------------hhhh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECN-------------------------NLLL 505 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~-------------------------~l~~ 505 (633)
++|+|+| +|-+|...++.|.+-|.+|+. .+.++.+++++.. .....- ++.+
T Consensus 21 ~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 21 AKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLG-AYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp -EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTT-TEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred eEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhccc-CceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 6777777 789999999999999999999 6667777766543 211111 1111
Q ss_pred cccCcceEEEE-----c----CcCCHHHHhhCCCCceeecccccCCC
Q 006722 506 SRSYSQKIWLV-----G----KGLTEEEQSKAKKGTIFIPFSQFPPN 543 (633)
Q Consensus 506 ~~~~~~~vw~v-----g----~~~~~~~q~~a~~G~~f~~~~~~~~~ 543 (633)
..+ .+++++. | ..++.++-++++||.+++|+| .+.-
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis-~D~g 143 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS-CDQG 143 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT-GGGT
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE-ecCC
Confidence 110 3344432 2 468899999999999999999 5544
No 430
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=84.19 E-value=1.3 Score=40.97 Aligned_cols=28 Identities=32% Similarity=0.409 Sum_probs=25.4
Q ss_pred EEEEeccCccHHHHHHHHHhh-cCcEEEe
Q 006722 454 QVVLRGALTKVAYAIAFALCQ-KGIQVVT 481 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~-~~~~v~l 481 (633)
+|.+.|++|++|+++++.+.+ ++.++.-
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~ 30 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVG 30 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEE
Confidence 589999999999999999998 5888777
No 431
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=83.88 E-value=2.6 Score=47.21 Aligned_cols=69 Identities=20% Similarity=0.220 Sum_probs=42.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe---cChhHHHHHHHHh---CCccccchhhhcccCcceEEEEcCcCCHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT---LREDEHEKLRKSF---GAKSECNNLLLSRSYSQKIWLVGKGLTEE 523 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l---~~~~~~~~l~~~l---~~~~~~~~l~~~~~~~~~vw~vg~~~~~~ 523 (633)
++|+|+|+ |.+|.++|++|.++|.+|++ ++.++.+.+.+++ |..-..+.-.+ ...+++++++.-++.|.
T Consensus 17 ~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-~~~~~D~Vv~s~Gi~~~ 91 (480)
T PRK01438 17 LRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-LPEDTDLVVTSPGWRPD 91 (480)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-ccCCCCEEEECCCcCCC
Confidence 58999997 78999999999999999998 3333444443333 22111111011 12246777777777543
No 432
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=83.85 E-value=3.7 Score=43.78 Aligned_cols=89 Identities=16% Similarity=0.159 Sum_probs=55.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHh-------CCc--c---ccchhhhcccCcceEE--EE
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSF-------GAK--S---ECNNLLLSRSYSQKIW--LV 516 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l-------~~~--~---~~~~l~~~~~~~~~vw--~v 516 (633)
.+|.+.|+ |.+|.++|..|++.|.+|++ |++++.+.+++.- |.. . ....+.++.+ +++++ .+
T Consensus 5 m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~-~aD~Vi~~v 82 (328)
T PRK14618 5 MRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALA-GADFAVVAV 82 (328)
T ss_pred CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHc-CCCEEEEEC
Confidence 46888875 89999999999999999999 8888888888641 100 0 0012222221 44453 22
Q ss_pred cCcCCHHHHhhCCCCceeecccc-cCCC
Q 006722 517 GKGLTEEEQSKAKKGTIFIPFSQ-FPPN 543 (633)
Q Consensus 517 g~~~~~~~q~~a~~G~~f~~~~~-~~~~ 543 (633)
-..-..+--..+++|+.++.++. +.+.
T Consensus 83 ~~~~~~~v~~~l~~~~~vi~~~~Gi~~~ 110 (328)
T PRK14618 83 PSKALRETLAGLPRALGYVSCAKGLAPD 110 (328)
T ss_pred chHHHHHHHHhcCcCCEEEEEeeccccC
Confidence 12111111134788999998887 6544
No 433
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=83.80 E-value=2.8 Score=43.97 Aligned_cols=102 Identities=19% Similarity=0.209 Sum_probs=63.1
Q ss_pred cCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcc-cCcceEEEEcC--cCC------HHHHhhC
Q 006722 460 ALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSR-SYSQKIWLVGK--GLT------EEEQSKA 528 (633)
Q Consensus 460 atgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~-~~~~~vw~vg~--~~~------~~~q~~a 528 (633)
++|.+|+++|+.|++.|.+|.+ |++++.+++++. |.... ....++. ..+..+..|-+ .+. ++-...+
T Consensus 3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~~~-~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~~ 80 (288)
T TIGR01692 3 GLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAA-GAQAA-ASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPKV 80 (288)
T ss_pred cccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHc-CCeec-CCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhcC
Confidence 4689999999999999999998 899999888765 33211 2233332 21332233322 111 1111246
Q ss_pred CCCceeecccccCCCc-----ccCC-CCceeecCcccccCC
Q 006722 529 KKGTIFIPFSQFPPND-----KKIR-KDCMYHLTPAMAVPA 563 (633)
Q Consensus 529 ~~G~~f~~~~~~~~~~-----~~~R-~dc~y~~~~a~~~p~ 563 (633)
++|+++++.|-++|.. ..++ +.+.|.+.|.+--|.
T Consensus 81 ~~g~~vid~st~~p~~~~~~~~~~~~~g~~~vdaPv~Gg~~ 121 (288)
T TIGR01692 81 AKGSLLIDCSTIDPDSARKLAELAAAHGAVFMDAPVSGGVG 121 (288)
T ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEECCCCCCHH
Confidence 8999999999988863 1122 456688877664433
No 434
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=83.76 E-value=0.96 Score=47.96 Aligned_cols=27 Identities=11% Similarity=0.203 Sum_probs=24.2
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEE
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVV 480 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~ 480 (633)
+|+|+||||-||+.+++.|.++|.+++
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v 28 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSV 28 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeE
Confidence 589999999999999999999986643
No 435
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=83.72 E-value=3.9 Score=42.69 Aligned_cols=54 Identities=17% Similarity=0.058 Sum_probs=40.5
Q ss_pred hHHHHHHhcCCC-CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHH
Q 006722 439 LAVAVVINSIPK-GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRK 492 (633)
Q Consensus 439 ltaavv~~~i~~-~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 492 (633)
.||...++.+.. ....|++.|++|.+|.+.++.+.++|.+++. ++.++.+.+++
T Consensus 149 ~~a~~~~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~ 205 (334)
T PRK13771 149 GMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSK 205 (334)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 344444455522 2268999999999999999998888999876 77888887743
No 436
>PLN02928 oxidoreductase family protein
Probab=83.72 E-value=3.1 Score=45.34 Aligned_cols=83 Identities=13% Similarity=0.170 Sum_probs=52.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCc-----------cccchhhhcccCcceEEEEc--
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAK-----------SECNNLLLSRSYSQKIWLVG-- 517 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~-----------~~~~~l~~~~~~~~~vw~vg-- 517 (633)
++|.++|. |.||+++|+.|..-|.+|+. |+.++-.. ..+|.+ .....|.+..+ .+|++++-
T Consensus 160 ktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~ell~-~aDiVvl~lP 235 (347)
T PLN02928 160 KTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPE--DGLLIPNGDVDDLVDEKGGHEDIYEFAG-EADIVVLCCT 235 (347)
T ss_pred CEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhh--hhhccccccccccccccCcccCHHHHHh-hCCEEEECCC
Confidence 67888886 99999999999888999988 43221110 110000 01123333332 34554332
Q ss_pred ------CcCCHHHHhhCCCCceeecccc
Q 006722 518 ------KGLTEEEQSKAKKGTIFIPFSQ 539 (633)
Q Consensus 518 ------~~~~~~~q~~a~~G~~f~~~~~ 539 (633)
..|+.++-.+||+|+++|.++|
T Consensus 236 lt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 236 LTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 3456777789999999999998
No 437
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=83.53 E-value=1.7 Score=47.27 Aligned_cols=34 Identities=21% Similarity=0.155 Sum_probs=27.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhc-CcEEEe--cChhH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQK-GIQVVT--LREDE 486 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~-~~~v~l--~~~~~ 486 (633)
.+|+++||||.+|+.+.+.|.+. ..++.. ++++.
T Consensus 4 ~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~ 40 (349)
T PRK08664 4 LKVGILGATGMVGQRFVQLLANHPWFEVTALAASERS 40 (349)
T ss_pred cEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence 47999999999999999999977 556655 44433
No 438
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=83.52 E-value=2.6 Score=43.29 Aligned_cols=41 Identities=20% Similarity=0.345 Sum_probs=35.0
Q ss_pred EEEEeccCccHHHHHHHHHhhcC---cEEEe--cChhHHHHHHHHhC
Q 006722 454 QVVLRGALTKVAYAIAFALCQKG---IQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~---~~v~l--~~~~~~~~l~~~l~ 495 (633)
+|.++|+ |.+|+++|+.|.+.| .+|.+ |++++.+.+++++|
T Consensus 4 ~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g 49 (267)
T PRK11880 4 KIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYG 49 (267)
T ss_pred EEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcC
Confidence 5889995 999999999999988 66766 88899999988764
No 439
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=83.50 E-value=2.9 Score=43.03 Aligned_cols=83 Identities=11% Similarity=0.085 Sum_probs=49.7
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcE---EEe--cChhHHHHHHHHhCCccccchhhhcccCcceEE--EEcC-cCCH-HH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQ---VVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIW--LVGK-GLTE-EE 524 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~---v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw--~vg~-~~~~-~~ 524 (633)
+|.++| +|.+|+++++.|.+.|.+ +.+ |++++.++++++.+......+..+..+ ++|++ .+-. .+.+ -+
T Consensus 2 ~IgiIG-~G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~-~aDvVilav~p~~~~~vl~ 79 (258)
T PRK06476 2 KIGFIG-TGAITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVD-RSDVVFLAVRPQIAEEVLR 79 (258)
T ss_pred eEEEEC-cCHHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHH-hCCEEEEEeCHHHHHHHHH
Confidence 477888 899999999999988754 234 889999999887621122222222221 34443 2221 1111 12
Q ss_pred HhhCCCCceeeccc
Q 006722 525 QSKAKKGTIFIPFS 538 (633)
Q Consensus 525 q~~a~~G~~f~~~~ 538 (633)
+.+..+|.+++..+
T Consensus 80 ~l~~~~~~~vis~~ 93 (258)
T PRK06476 80 ALRFRPGQTVISVI 93 (258)
T ss_pred HhccCCCCEEEEEC
Confidence 33466888888776
No 440
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=83.50 E-value=6.7 Score=40.27 Aligned_cols=75 Identities=16% Similarity=0.166 Sum_probs=48.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEE-e--c----------ChhHHHHHHHHhCCccccch---h--hhcccCcceEE
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVV-T--L----------REDEHEKLRKSFGAKSECNN---L--LLSRSYSQKIW 514 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~-l--~----------~~~~~~~l~~~l~~~~~~~~---l--~~~~~~~~~vw 514 (633)
++|++.| .|+||+.+|+.|.++|.+|+ + . +.+++.+++++-|.-.+... + .+..+.+|||.
T Consensus 32 ~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~~~~~~~~i~~~~~Dvl 110 (227)
T cd01076 32 ARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERITNEELLELDCDIL 110 (227)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCceecCCccceeecccEE
Confidence 7999998 79999999999999999999 5 3 56777777666432221100 0 01112256664
Q ss_pred ---EEcCcCCHHHHhhC
Q 006722 515 ---LVGKGLTEEEQSKA 528 (633)
Q Consensus 515 ---~vg~~~~~~~q~~a 528 (633)
..++.|+++.-.++
T Consensus 111 ip~a~~~~i~~~~~~~l 127 (227)
T cd01076 111 IPAALENQITADNADRI 127 (227)
T ss_pred EecCccCccCHHHHhhc
Confidence 45667776664433
No 441
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=83.46 E-value=0.69 Score=50.20 Aligned_cols=123 Identities=14% Similarity=0.109 Sum_probs=65.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhc---CcEEEe-cChhHHHH-HHHHhCCcccc--chhhhcccCcceEE--EEcCcCCHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQK---GIQVVT-LREDEHEK-LRKSFGAKSEC--NNLLLSRSYSQKIW--LVGKGLTEE 523 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~---~~~v~l-~~~~~~~~-l~~~l~~~~~~--~~l~~~~~~~~~vw--~vg~~~~~~ 523 (633)
-+|.++||||-+|+.+.+.|.++ .+++.. ++++.-.+ +. + ...+. ..+....-.++|++ +++...+.+
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~--~-~~~~l~~~~~~~~~~~~vD~vFla~p~~~s~~ 81 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP--F-AGKNLRVREVDSFDFSQVQLAFFAAGAAVSRS 81 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec--c-CCcceEEeeCChHHhcCCCEEEEcCCHHHHHH
Confidence 36999999999999999999965 334333 44432110 10 1 00111 11110000245664 344333322
Q ss_pred HHhh-CCCCceeecccccCCCcccCC-CCceeecCcccccCCc----cccccccccCCCcchhhh--HhhhhhhhhccCC
Q 006722 524 EQSK-AKKGTIFIPFSQFPPNDKKIR-KDCMYHLTPAMAVPAA----FENVDSCENWLPRRVMSA--WRIGGIVHALEGW 595 (633)
Q Consensus 524 ~q~~-a~~G~~f~~~~~~~~~~~~~R-~dc~y~~~~a~~~p~~----~~~~~~~e~~~p~~~~~A--c~a~~~v~alEgw 595 (633)
-=.. ...|+.+||.| +..| +|+- ..+|+= +++++ +++.+.- |.+-+++++|.-.
T Consensus 82 ~v~~~~~~G~~VIDlS------~~fR~~~~p------l~lPEvn~~~i~~~~------~~~iIAnPgC~~t~~~laL~PL 143 (336)
T PRK05671 82 FAEKARAAGCSVIDLS------GALPSAQAP------NVVPEVNAERLASLA------APFLVSSPSASAVALAVALAPL 143 (336)
T ss_pred HHHHHHHCCCeEEECc------hhhcCCCCC------EEecccCHHHHcccc------CCCEEECCCcHHHHHHHHHHHH
Confidence 2112 36799999999 7788 4333 446661 22110 2333332 9999999888764
Q ss_pred C
Q 006722 596 N 596 (633)
Q Consensus 596 ~ 596 (633)
.
T Consensus 144 ~ 144 (336)
T PRK05671 144 K 144 (336)
T ss_pred H
Confidence 4
No 442
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=83.45 E-value=5.2 Score=40.40 Aligned_cols=43 Identities=21% Similarity=0.212 Sum_probs=37.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
..|++.|++|.+|.+.++.+..+|.+|.. +++++.+.+ +++|.
T Consensus 138 ~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~ 182 (320)
T cd05286 138 DTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGA 182 (320)
T ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCC
Confidence 68999999999999999988888999887 788888888 45665
No 443
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=83.40 E-value=1.9 Score=45.73 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=33.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRK 492 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 492 (633)
.+|.++| +|-+|+++|..|+++|.+|++ ++++..+..++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~ 43 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPA 43 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHH
Confidence 3689999 899999999999999999999 88887776543
No 444
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=83.35 E-value=2.9 Score=43.17 Aligned_cols=85 Identities=21% Similarity=0.260 Sum_probs=56.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccc----hhh----hccc-CcceEEE--EcCc
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECN----NLL----LSRS-YSQKIWL--VGKG 519 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~----~l~----~~~~-~~~~vw~--vg~~ 519 (633)
..|++.|++|.||.++++.+...|.++.. ++.++.+.+++ +|...... .+. +.+. ...++++ +|..
T Consensus 141 ~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~ 219 (324)
T cd08292 141 QWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGK 219 (324)
T ss_pred CEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCCh
Confidence 68999999999999999988888999887 77888888876 56522111 111 2221 1345542 3443
Q ss_pred CCHHHHhhCCCCceeeccc
Q 006722 520 LTEEEQSKAKKGTIFIPFS 538 (633)
Q Consensus 520 ~~~~~q~~a~~G~~f~~~~ 538 (633)
...+-.+.++++-.|+.+.
T Consensus 220 ~~~~~~~~l~~~g~~v~~g 238 (324)
T cd08292 220 LAGELLSLLGEGGTLVSFG 238 (324)
T ss_pred hHHHHHHhhcCCcEEEEEe
Confidence 4445556677888888886
No 445
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=83.25 E-value=2 Score=46.19 Aligned_cols=43 Identities=28% Similarity=0.436 Sum_probs=35.8
Q ss_pred CccEEEEeccCccHHHHHHHHHhhcCc--EEEe--cChhHHHHHHHHh
Q 006722 451 GTTQVVLRGALTKVAYAIAFALCQKGI--QVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 451 ~~~~V~~~Gatgkig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~l 494 (633)
...+|.++|| |.||+++|..|+.+|+ ++.| +++++.+-...+|
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl 51 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDL 51 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHH
Confidence 3368999999 9999999999999988 6666 7788877777665
No 446
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=83.09 E-value=3.3 Score=43.08 Aligned_cols=86 Identities=15% Similarity=0.100 Sum_probs=53.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc----chhh----hcccCcceEEE--EcCcC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC----NNLL----LSRSYSQKIWL--VGKGL 520 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~----~~l~----~~~~~~~~vw~--vg~~~ 520 (633)
..|++.||+|.+|.++++.+.+.|.+|.. +++++.+.+ +++|..... .... +......++++ +|...
T Consensus 141 ~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~ 219 (329)
T cd08250 141 ETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEM 219 (329)
T ss_pred CEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHH
Confidence 68999999999999998888888999877 778888888 456642211 1111 11111234432 22222
Q ss_pred CHHHHhhCCCCceeecccc
Q 006722 521 TEEEQSKAKKGTIFIPFSQ 539 (633)
Q Consensus 521 ~~~~q~~a~~G~~f~~~~~ 539 (633)
..+-.+.++++-.|+.+..
T Consensus 220 ~~~~~~~l~~~g~~v~~g~ 238 (329)
T cd08250 220 FDTCVDNLALKGRLIVIGF 238 (329)
T ss_pred HHHHHHHhccCCeEEEEec
Confidence 2333456777878887763
No 447
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=83.07 E-value=2.4 Score=37.63 Aligned_cols=38 Identities=34% Similarity=0.443 Sum_probs=32.6
Q ss_pred EEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 455 VVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
|+++|. |.+|+.+++.|-+++.+|++ +++++.++++++
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~ 40 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE 40 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc
Confidence 578888 58999999999998888888 899998988877
No 448
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=82.96 E-value=2.6 Score=43.02 Aligned_cols=86 Identities=16% Similarity=0.207 Sum_probs=55.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccc----hh----hhccc-CcceEEE--EcCc
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECN----NL----LLSRS-YSQKIWL--VGKG 519 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~----~l----~~~~~-~~~~vw~--vg~~ 519 (633)
+.|++.|++|.+|.++++.+..+|.++.. +++++.+.++ ++|...... .. .+.+. ..+++++ +|..
T Consensus 146 ~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 224 (328)
T cd08268 146 DSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGP 224 (328)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchH
Confidence 68999999999999999999999999888 7888888884 455422111 11 11121 1344542 2333
Q ss_pred CCHHHHhhCCCCceeecccc
Q 006722 520 LTEEEQSKAKKGTIFIPFSQ 539 (633)
Q Consensus 520 ~~~~~q~~a~~G~~f~~~~~ 539 (633)
...+-.+.++++-.|+.+++
T Consensus 225 ~~~~~~~~l~~~g~~v~~g~ 244 (328)
T cd08268 225 QFAKLADALAPGGTLVVYGA 244 (328)
T ss_pred hHHHHHHhhccCCEEEEEEe
Confidence 33333456777778887764
No 449
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=82.83 E-value=3.6 Score=40.92 Aligned_cols=43 Identities=21% Similarity=0.234 Sum_probs=36.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
..|++.|++|.+|.++++.+..+|++|+. +++++.+.++ ++|.
T Consensus 106 ~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~ 150 (288)
T smart00829 106 ESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGI 150 (288)
T ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCC
Confidence 68999999999999999988888999877 7888888874 5665
No 450
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=82.70 E-value=2.5 Score=47.07 Aligned_cols=40 Identities=30% Similarity=0.347 Sum_probs=32.5
Q ss_pred HHHHHhcCC---------CCccEEEEeccCccHHHH--HHHHHhhcCcEEEe
Q 006722 441 VAVVINSIP---------KGTTQVVLRGALTKVAYA--IAFALCQKGIQVVT 481 (633)
Q Consensus 441 aavv~~~i~---------~~~~~V~~~Gatgkig~a--va~~L~~~~~~v~l 481 (633)
.+-|.|||. .+-+.|+|+|+++++|.| ||+.| +.|.++++
T Consensus 21 ~~~v~~qi~~~~~~~~~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~ 71 (398)
T PRK13656 21 EANVKEQIEYVKAQGPIANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLG 71 (398)
T ss_pred HHHHHHHHHHHHhcCCcCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEE
Confidence 455666662 345899999999999999 99999 99998766
No 451
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=82.62 E-value=1.2 Score=46.76 Aligned_cols=27 Identities=22% Similarity=0.452 Sum_probs=24.3
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+|+|+||+|-||+++++.|.++| +|+.
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~ 28 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIA 28 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEE
Confidence 69999999999999999999998 6654
No 452
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=82.32 E-value=2.3 Score=44.85 Aligned_cols=40 Identities=30% Similarity=0.410 Sum_probs=35.6
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
++|.++|+ |.+|+++|..|.+.|.+|++ +++++.++++++
T Consensus 5 ~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~ 46 (311)
T PRK06130 5 QNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGV 46 (311)
T ss_pred cEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 57899988 89999999999999999999 888888888764
No 453
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=82.26 E-value=4.2 Score=44.08 Aligned_cols=90 Identities=23% Similarity=0.296 Sum_probs=63.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc-----chhh-hcccCcceE--EEE-c----
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC-----NNLL-LSRSYSQKI--WLV-G---- 517 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~-----~~l~-~~~~~~~~v--w~v-g---- 517 (633)
.+|++.|+ |=+|.--|+....-|-+|++ +|-+|+..|....|-.-.. .++. +++++|..| +++ |
T Consensus 169 ~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaP 247 (371)
T COG0686 169 AKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAP 247 (371)
T ss_pred ccEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCc
Confidence 46777775 56778888888888999998 9999999999887433111 3444 344444433 332 2
Q ss_pred CcCCHHHHhhCCCCceeecccccCCCc
Q 006722 518 KGLTEEEQSKAKKGTIFIPFSQFPPND 544 (633)
Q Consensus 518 ~~~~~~~q~~a~~G~~f~~~~~~~~~~ 544 (633)
+-++.|.+++|+||++.+|++ ++.--
T Consensus 248 kLvt~e~vk~MkpGsVivDVA-iDqGG 273 (371)
T COG0686 248 KLVTREMVKQMKPGSVIVDVA-IDQGG 273 (371)
T ss_pred eehhHHHHHhcCCCcEEEEEE-EcCCC
Confidence 346778899999999999998 66543
No 454
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=82.10 E-value=3.9 Score=43.07 Aligned_cols=42 Identities=17% Similarity=0.268 Sum_probs=35.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
..|++.| +|.+|.++++.+..+|.+|+. +++++.+.+ +++|+
T Consensus 165 ~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~ 208 (333)
T cd08296 165 DLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGA 208 (333)
T ss_pred CEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCC
Confidence 6899999 899999999988888999877 888888877 56765
No 455
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=82.00 E-value=3.9 Score=41.36 Aligned_cols=43 Identities=23% Similarity=0.307 Sum_probs=37.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
..|++.|++|.+|.++++.+..+|.++.+ +++++.+.+ +++|.
T Consensus 141 ~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~ 185 (323)
T cd05276 141 ETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGA 185 (323)
T ss_pred CEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCC
Confidence 68999999999999999999999999887 788888887 44554
No 456
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=81.96 E-value=1.6 Score=45.77 Aligned_cols=26 Identities=19% Similarity=0.261 Sum_probs=23.2
Q ss_pred EEeccCccHHHHHHHHHhhcC--cEEEe
Q 006722 456 VLRGALTKVAYAIAFALCQKG--IQVVT 481 (633)
Q Consensus 456 ~~~Gatgkig~ava~~L~~~~--~~v~l 481 (633)
+|+||+|=||+.+++.|.++| .+|..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~ 28 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRV 28 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEE
Confidence 589999999999999999999 56665
No 457
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=81.89 E-value=1.5 Score=48.86 Aligned_cols=96 Identities=21% Similarity=0.284 Sum_probs=58.5
Q ss_pred eeeeEEeecccccccc-cchhhHHHHHHHHHHHHHHHcCCcEEEe--cccccccccccCCceEEeeCCCCcceeecCChh
Q 006722 363 RLQTWAIPRYNFQYLF-QRQNESINRLIEEAILEAEEKGAKVISL--GLMNQGEELNRYGGVFVHKHPQLKMKVVDGSSL 439 (633)
Q Consensus 363 ~~~~w~~p~~~~qy~~-~~~~~~in~~i~~Ai~~A~k~G~kv~~L--G~ln~~e~ln~~g~~~~~k~p~L~irvv~Gnsl 439 (633)
....-++|-.+..|.. +--. +-+..-.+.|+.|+.= |-|-.+ +.=.-|-|+.+ -
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~--------~Nl~~L~~~G~~ii~P~~g~la~~-------~~g~gr~~~~~--------~ 172 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQ--------RNLATLRSRGVEIIGPASGRLACG-------DVGPGRMAEPE--------E 172 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHH--------HHHHHHHHCCCEEECCCCccccCC-------CcCCCCCCCHH--------H
Confidence 3367778877775443 3333 3344445689999843 333322 22222334432 1
Q ss_pred HHHHHHhcC-CCCc--cEEEEecc----------------CccHHHHHHHHHhhcCcEEEe
Q 006722 440 AVAVVINSI-PKGT--TQVVLRGA----------------LTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 440 taavv~~~i-~~~~--~~V~~~Ga----------------tgkig~ava~~L~~~~~~v~l 481 (633)
.+..+.+.+ +++. +.|+++|+ +|++|+++|+.|.++|.+|++
T Consensus 173 I~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~ 233 (399)
T PRK05579 173 IVAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTL 233 (399)
T ss_pred HHHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEE
Confidence 123333333 2333 78999999 799999999999999999998
No 458
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=81.71 E-value=3.6 Score=42.41 Aligned_cols=43 Identities=23% Similarity=0.310 Sum_probs=37.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
..|++.|++|.||.++++.+..+|.++.. +++++.+.+ +++|.
T Consensus 140 ~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~ 184 (323)
T cd05282 140 DWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGA 184 (323)
T ss_pred CEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCC
Confidence 68999999999999999998889999877 788888888 45665
No 459
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=81.62 E-value=2.1 Score=45.43 Aligned_cols=41 Identities=29% Similarity=0.500 Sum_probs=34.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCc--EEEe--cChhHHHHHHHHh
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGI--QVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~l 494 (633)
++|.++|+ |.+|+++|..|+++|. ++.+ +++++.+.+..++
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL 45 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDL 45 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhH
Confidence 36899997 9999999999999985 6777 8888888777765
No 460
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=81.60 E-value=4.1 Score=43.42 Aligned_cols=43 Identities=28% Similarity=0.357 Sum_probs=36.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCc
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAK 497 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~ 497 (633)
.+|++.|+ |.||.+.++.+...|.+|.. ++++|++.+ +++|+.
T Consensus 168 ~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~Ga~ 212 (349)
T TIGR03201 168 DLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFGAD 212 (349)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCc
Confidence 68999999 99999999988888998776 788898877 557653
No 461
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=81.51 E-value=4.6 Score=41.62 Aligned_cols=86 Identities=14% Similarity=0.145 Sum_probs=54.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc--c--hhh----hccc-CcceEEE--EcCc
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC--N--NLL----LSRS-YSQKIWL--VGKG 519 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~--~--~l~----~~~~-~~~~vw~--vg~~ 519 (633)
..|++.|++|.+|.++++.+..+|.+|.. +++++.+.+ +++|+.... . ... +.+. ...++++ +|..
T Consensus 144 ~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~ 222 (324)
T cd08244 144 DVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGA 222 (324)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChH
Confidence 68999999999999999998888999877 788888887 456652211 0 111 1121 1345542 2332
Q ss_pred CCHHHHhhCCCCceeecccc
Q 006722 520 LTEEEQSKAKKGTIFIPFSQ 539 (633)
Q Consensus 520 ~~~~~q~~a~~G~~f~~~~~ 539 (633)
...+-=+.++++..|+.++.
T Consensus 223 ~~~~~~~~l~~~g~~v~~g~ 242 (324)
T cd08244 223 IGRAALALLAPGGRFLTYGW 242 (324)
T ss_pred hHHHHHHHhccCcEEEEEec
Confidence 22333345667777888763
No 462
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=81.07 E-value=4.6 Score=42.33 Aligned_cols=99 Identities=13% Similarity=0.082 Sum_probs=59.5
Q ss_pred hHHHHHHhcCCC-CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc---c-hhh----hcc
Q 006722 439 LAVAVVINSIPK-GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC---N-NLL----LSR 507 (633)
Q Consensus 439 ltaavv~~~i~~-~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~---~-~l~----~~~ 507 (633)
+||+-.++.++- ....|++.|+.|.+|.++++.+.++|++|.+ +++++.+.+ +++|..... + ... +.+
T Consensus 152 ~ta~~~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~ 230 (341)
T cd08297 152 VTVYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADAFVDFKKSDDVEAVKELT 230 (341)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcEEEcCCCccHHHHHHHHh
Confidence 344434444322 2378999999999999999999999999888 788888877 557643321 1 111 111
Q ss_pred -cCcceEEE--EcC-cCCHHHHhhCCCCceeeccc
Q 006722 508 -SYSQKIWL--VGK-GLTEEEQSKAKKGTIFIPFS 538 (633)
Q Consensus 508 -~~~~~vw~--vg~-~~~~~~q~~a~~G~~f~~~~ 538 (633)
....++++ .|. ....+--+.++++.+++.++
T Consensus 231 ~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g 265 (341)
T cd08297 231 GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVG 265 (341)
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEec
Confidence 11334443 221 12222334577777788776
No 463
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=81.05 E-value=2.5 Score=44.58 Aligned_cols=92 Identities=16% Similarity=0.197 Sum_probs=53.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhc---CcEEEe----cChhHHHHHHHHhCCccccchhhhcccCcc--eEEEEcCcCCHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQK---GIQVVT----LREDEHEKLRKSFGAKSECNNLLLSRSYSQ--KIWLVGKGLTEE 523 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~---~~~v~l----~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~--~vw~vg~~~~~~ 523 (633)
+-++++||+|++|-++|.-|-+. +++.++ |+.+|-|+.-.+| .++ -.+-++ .+++|| +++.
T Consensus 4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~l---k~f-----~p~~~i~~~yvlvD--~sNm 73 (341)
T KOG1478|consen 4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAAL---KAF-----HPKSTIEVTYVLVD--VSNM 73 (341)
T ss_pred eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHH---HHh-----CCCceeEEEEEEEe--hhhH
Confidence 34678999999999999888754 444444 9999987765554 111 111122 345552 1111
Q ss_pred HHhhCCCCceeecccccCCCcccCCCCceeecCcccccCC
Q 006722 524 EQSKAKKGTIFIPFSQFPPNDKKIRKDCMYHLTPAMAVPA 563 (633)
Q Consensus 524 ~q~~a~~G~~f~~~~~~~~~~~~~R~dc~y~~~~a~~~p~ 563 (633)
. . +|--+..+..+- -|-||.|..-++|..|+
T Consensus 74 ~-S------v~~A~~di~~rf--~~ld~iylNAg~~~~~g 104 (341)
T KOG1478|consen 74 Q-S------VFRASKDIKQRF--QRLDYIYLNAGIMPNPG 104 (341)
T ss_pred H-H------HHHHHHHHHHHh--hhccEEEEccccCCCCc
Confidence 1 0 000000022221 23899999999999998
No 464
>cd03510 Rhizobitoxine-FADS-like This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins. Dihydrorhizobitoxine desaturase is reported to be involved in the final step of rhizobitoxine biosynthesis. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXX(X)HH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase.
Probab=81.02 E-value=8.6 Score=37.81 Aligned_cols=85 Identities=20% Similarity=0.157 Sum_probs=43.6
Q ss_pred hhhhhhhhcCCCCCCCCcchhccchhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhcccccceecccc--
Q 006722 153 YLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFALFAIPLITPLLSGMGSIASVLGYVTYIDFMNNMGHCNFELMPSC-- 230 (633)
Q Consensus 153 ~Ly~r~Hk~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~~lg~~~~~~~~~y~~~~~~~~~~~Hsg~e~~P~~-- 230 (633)
..|+..|..||...+. +- +| |.-....+..+|+++. +..+..+.+...|.+.+-....
T Consensus 71 ~~~r~~H~~HH~~~~~-~~-----Dp-d~~~~~~~W~~P~~~~-------------~~~~~~~~~~~eH~~~~~~~~~~~ 130 (175)
T cd03510 71 AAYRRSHLKHHRHLGT-ED-----DP-DLALYLLLWLVPLLTV-------------FPLIGRIREIAEHAGVPADEDPDA 130 (175)
T ss_pred HHHHHHHHHHhCccCC-CC-----CC-cHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhccCCCCCCcchh
Confidence 4578899999998653 21 11 1112222344666542 1223344566678875431111
Q ss_pred ---ccccCCCc-ccccC--CchhHHHhhcCCCC
Q 006722 231 ---LLTNFPPL-KYLAY--TASFHSLHHTQFRT 257 (633)
Q Consensus 231 ---~~~~~p~L-k~li~--tp~~H~lHH~~~~~ 257 (633)
-....+++ ++++. .-.||-.||.....
T Consensus 131 ~~tr~~~~~~~~r~l~~p~~~~YH~eHHl~P~v 163 (175)
T cd03510 131 RNTRTTFGGWIERLLFAPHNINYHLEHHLFPAV 163 (175)
T ss_pred hcCccccccHHHHHHHcccCCcHHHHHhCCcCC
Confidence 01112333 44442 57899999998653
No 465
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=80.91 E-value=2.9 Score=43.90 Aligned_cols=39 Identities=18% Similarity=0.113 Sum_probs=33.2
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHH
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLR 491 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~ 491 (633)
.++|.++|+ |.+|+++|..|++.|.+|.+ ++++++++.+
T Consensus 4 ~~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 44 (295)
T PLN02545 4 IKKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSRGL 44 (295)
T ss_pred cCEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence 357999987 89999999999999999999 7888876543
No 466
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=80.87 E-value=5.2 Score=41.71 Aligned_cols=86 Identities=22% Similarity=0.261 Sum_probs=57.8
Q ss_pred ceeecCChhH----HHHHHhcCCCCccEEEEeccC--cc--HHHHHHHHHhhcCcEEEe-cChhHHHHHHHHhCCccccc
Q 006722 431 MKVVDGSSLA----VAVVINSIPKGTTQVVLRGAL--TK--VAYAIAFALCQKGIQVVT-LREDEHEKLRKSFGAKSECN 501 (633)
Q Consensus 431 irvv~Gnslt----aavv~~~i~~~~~~V~~~Gat--gk--ig~ava~~L~~~~~~v~l-~~~~~~~~l~~~l~~~~~~~ 501 (633)
+.+.++..-. ++..++.++ .-+.+++.|.. || ++.|++..||++|++|+. +-.|=..+|+...+-+..-.
T Consensus 81 ~~~~~~~~~~~l~~~~~~~~~~~-~~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~~~~~~~~~ 159 (254)
T COG1484 81 FEFQPGIDKKALEDLASLVEFFE-RGENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAAFDEGRLEE 159 (254)
T ss_pred ccCCcchhHHHHHHHHHHHHHhc-cCCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHhcCchHH
Confidence 4444444433 233344666 66788999987 57 899999999988999999 88888899988862211112
Q ss_pred hhhh-cccCcceEEEEcCc
Q 006722 502 NLLL-SRSYSQKIWLVGKG 519 (633)
Q Consensus 502 ~l~~-~~~~~~~vw~vg~~ 519 (633)
.|.. +. ++++.|+||.
T Consensus 160 ~l~~~l~--~~dlLIiDDl 176 (254)
T COG1484 160 KLLRELK--KVDLLIIDDI 176 (254)
T ss_pred HHHHHhh--cCCEEEEecc
Confidence 3332 33 6678888665
No 467
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=80.77 E-value=3.6 Score=42.88 Aligned_cols=44 Identities=20% Similarity=0.287 Sum_probs=36.9
Q ss_pred ccEEEEeccCccHHHHHHHHHhhc-CcEEEe--cChhHHHHHHHHhCC
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQK-GIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~-~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
-..|++.||+|.+|.++++.+..+ |.+|.. +++++.+.+ +++|+
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~g~ 195 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LELGA 195 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHcCC
Confidence 468999999999999999888877 999877 677888888 45765
No 468
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=80.74 E-value=4.9 Score=46.19 Aligned_cols=88 Identities=18% Similarity=0.157 Sum_probs=60.5
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcccc-ch----------hhhcc-----------
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSEC-NN----------LLLSR----------- 507 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~-~~----------l~~~~----------- 507 (633)
.++|+|.|+ |-||...+..+...|-+|.. ++.+|++..++ +|+.... +. ..+.+
T Consensus 165 g~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~ 242 (509)
T PRK09424 165 PAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALF 242 (509)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHHHHH
Confidence 378999987 68899888888888988877 88888886655 6765211 00 00111
Q ss_pred -c--CcceEEEEcCcC---------CHHHHhhCCCCceeecccccCC
Q 006722 508 -S--YSQKIWLVGKGL---------TEEEQSKAKKGTIFIPFSQFPP 542 (633)
Q Consensus 508 -~--~~~~vw~vg~~~---------~~~~q~~a~~G~~f~~~~~~~~ 542 (633)
+ ..+|+++-..++ +++.-+.+++|.++++++ +++
T Consensus 243 ~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg-~~~ 288 (509)
T PRK09424 243 AEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLA-AEN 288 (509)
T ss_pred HhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEc-cCC
Confidence 1 146776544433 688888999999999999 653
No 469
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=80.71 E-value=4.5 Score=42.99 Aligned_cols=44 Identities=20% Similarity=0.307 Sum_probs=34.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCc-EEEe--cChhHHHHHHHHhCCcc
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGI-QVVT--LREDEHEKLRKSFGAKS 498 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~l~~~~ 498 (633)
+.|++.|+ |.||.+.++.+..+|. +|.. ++++|++.++ ++|+..
T Consensus 171 ~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~~ 217 (343)
T PRK09880 171 KRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGADK 217 (343)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCcE
Confidence 68999986 9999999998888888 5654 7888887665 577654
No 470
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=80.66 E-value=5.7 Score=39.36 Aligned_cols=41 Identities=24% Similarity=0.214 Sum_probs=34.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
..|++.|++|.+|.++++.+..+|+++.. ++.++.+.+++.
T Consensus 110 ~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~ 152 (293)
T cd05195 110 ESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLREL 152 (293)
T ss_pred CEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh
Confidence 68999999999999999988888999888 667777777543
No 471
>PRK07574 formate dehydrogenase; Provisional
Probab=80.64 E-value=5.2 Score=44.35 Aligned_cols=83 Identities=13% Similarity=0.134 Sum_probs=53.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEEEEc--------CcCCH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIWLVG--------KGLTE 522 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw~vg--------~~~~~ 522 (633)
++|.++|. |.||+++|+.|..-|.+|.. |+... ....++.|... ...+.++.+ ++|++++= ..++.
T Consensus 193 ktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~-~~~~~~~g~~~-~~~l~ell~-~aDvV~l~lPlt~~T~~li~~ 268 (385)
T PRK07574 193 MTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLP-EEVEQELGLTY-HVSFDSLVS-VCDVVTIHCPLHPETEHLFDA 268 (385)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCc-hhhHhhcCcee-cCCHHHHhh-cCCEEEEcCCCCHHHHHHhCH
Confidence 67888886 89999999999988999988 33312 22233433221 123444432 44554332 23455
Q ss_pred HHHhhCCCCceeecccc
Q 006722 523 EEQSKAKKGTIFIPFSQ 539 (633)
Q Consensus 523 ~~q~~a~~G~~f~~~~~ 539 (633)
+.-..+++|+.||.++|
T Consensus 269 ~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 269 DVLSRMKRGSYLVNTAR 285 (385)
T ss_pred HHHhcCCCCcEEEECCC
Confidence 66778999999999999
No 472
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=80.57 E-value=4.4 Score=42.63 Aligned_cols=56 Identities=20% Similarity=0.264 Sum_probs=40.2
Q ss_pred HHHHHHhcCC-CCccEEEEeccCccHHHHHHHHHhhcCcE-EEe--cChhHHHHHHHHhCCc
Q 006722 440 AVAVVINSIP-KGTTQVVLRGALTKVAYAIAFALCQKGIQ-VVT--LREDEHEKLRKSFGAK 497 (633)
Q Consensus 440 taavv~~~i~-~~~~~V~~~Gatgkig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~l~~~ 497 (633)
||+..++.+. +.-.+|++.|+ |.||.+.++++...|.+ |.. ++++|.+.+ +++|+.
T Consensus 151 ta~~~l~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga~ 210 (339)
T cd08239 151 TAYHALRRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGAD 210 (339)
T ss_pred HHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCC
Confidence 3444444332 22478999986 99999999998888988 776 778888776 567763
No 473
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=80.37 E-value=1.9 Score=43.31 Aligned_cols=28 Identities=21% Similarity=0.424 Sum_probs=25.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCc-EEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGI-QVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~-~v~l 481 (633)
++|+++|+ |++|+.||.+|++-|+ ++++
T Consensus 22 ~~V~IvG~-GglGs~ia~~La~~Gvg~i~l 50 (200)
T TIGR02354 22 ATVAICGL-GGLGSNVAINLARAGIGKLIL 50 (200)
T ss_pred CcEEEECc-CHHHHHHHHHHHHcCCCEEEE
Confidence 78999999 7799999999999999 4777
No 474
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=80.23 E-value=4.8 Score=43.55 Aligned_cols=43 Identities=23% Similarity=0.238 Sum_probs=36.8
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
..|++.|++|.||.+++..+..+|.++.. +++++.+.+++ +|+
T Consensus 195 ~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~-~G~ 239 (393)
T cd08246 195 DNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRA-LGA 239 (393)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cCC
Confidence 69999999999999999988888999766 88888887755 764
No 475
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=80.17 E-value=4.7 Score=41.00 Aligned_cols=43 Identities=16% Similarity=0.231 Sum_probs=36.4
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
.+|++.|++|.+|.++++.+..+|.+|.. +++++.+.+ +++|.
T Consensus 141 ~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~ 185 (325)
T TIGR02824 141 ETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGA 185 (325)
T ss_pred CEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCC
Confidence 69999999999999999988888999877 778887766 55654
No 476
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=79.89 E-value=5.3 Score=41.51 Aligned_cols=44 Identities=25% Similarity=0.333 Sum_probs=36.9
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCcc
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKS 498 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~ 498 (633)
..|++.| +|.+|.++++.+..+|++|.. +++++.+.+++ +|+..
T Consensus 157 ~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~ 202 (319)
T cd08242 157 DKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARR-LGVET 202 (319)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cCCcE
Confidence 6788887 699999999999888999877 78889888876 76654
No 477
>PRK07877 hypothetical protein; Provisional
Probab=79.81 E-value=1.7 Score=51.90 Aligned_cols=39 Identities=23% Similarity=0.336 Sum_probs=30.1
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCc--EEEe--cChhHHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGI--QVVT--LREDEHEKLRKS 493 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~ 493 (633)
++|+++|+ | +|+.||.+|++.|+ ++++ .+.=+..+|+++
T Consensus 108 ~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq 150 (722)
T PRK07877 108 LRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRV 150 (722)
T ss_pred CCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccc
Confidence 79999999 7 99999999999997 6666 444444455554
No 478
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=79.78 E-value=4 Score=44.42 Aligned_cols=43 Identities=21% Similarity=0.191 Sum_probs=36.2
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
..|+|.|++|.||.++++++..+|.++.. +++++.+.+++ +|+
T Consensus 191 ~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~-~g~ 235 (398)
T TIGR01751 191 DNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRE-LGA 235 (398)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cCC
Confidence 69999999999999999888888999766 77888887765 654
No 479
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=79.75 E-value=2.4 Score=43.87 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=29.8
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcE-EEe--cChhHHHHHHHH
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQ-VVT--LREDEHEKLRKS 493 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~ 493 (633)
.++|+++|+ |++|+.+|..|++-|+. +++ .+.=+.++|.++
T Consensus 32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq 75 (245)
T PRK05690 32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQ 75 (245)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhh
Confidence 378999999 99999999999999885 433 333333444443
No 480
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=79.74 E-value=3.4 Score=47.30 Aligned_cols=41 Identities=24% Similarity=0.248 Sum_probs=36.3
Q ss_pred CCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHH
Q 006722 450 KGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLR 491 (633)
Q Consensus 450 ~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~ 491 (633)
++.++|.|+|+ |-.|+.||..|++.|++|++ ++++.+++..
T Consensus 5 ~~i~~V~VIGa-G~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~ 47 (507)
T PRK08268 5 PSIATVAVIGA-GAMGAGIAQVAAQAGHTVLLYDARAGAAAAAR 47 (507)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 35688999998 99999999999999999999 8888888753
No 481
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=79.71 E-value=4.1 Score=38.57 Aligned_cols=40 Identities=10% Similarity=0.186 Sum_probs=31.9
Q ss_pred EEEeccCccHHHHHHHHHhhcC--cEEEe----cChhHHHHHHHHh
Q 006722 455 VVLRGALTKVAYAIAFALCQKG--IQVVT----LREDEHEKLRKSF 494 (633)
Q Consensus 455 V~~~Gatgkig~ava~~L~~~~--~~v~l----~~~~~~~~l~~~l 494 (633)
|.+.|+||+||+.....+.+.. .+|.- +|-+++.+..+++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f 46 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREF 46 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHh
Confidence 6789999999999988887664 66655 7777777777776
No 482
>PRK08507 prephenate dehydrogenase; Validated
Probab=79.70 E-value=5.5 Score=41.40 Aligned_cols=82 Identities=18% Similarity=0.214 Sum_probs=48.7
Q ss_pred EEEEeccCccHHHHHHHHHhhcCc--EEEe--cChhHHHHHHHHhCCccccchhhhcccCcceEEEEcCcCC--HH--HH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGI--QVVT--LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIWLVGKGLT--EE--EQ 525 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw~vg~~~~--~~--~q 525 (633)
+|.++| +|.+|+++|+.|.++|. +|.. +++++.+.+++ .|.........++. +++++++--..+ .+ ++
T Consensus 2 ~I~iIG-~G~mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~--~aD~Vilavp~~~~~~~~~~ 77 (275)
T PRK08507 2 KIGIIG-LGLMGGSLGLALKEKGLISKVYGYDHNELHLKKALE-LGLVDEIVSFEELK--KCDVIFLAIPVDAIIEILPK 77 (275)
T ss_pred EEEEEc-cCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHH-CCCCcccCCHHHHh--cCCEEEEeCcHHHHHHHHHH
Confidence 578888 69999999999999884 6665 78888877754 44432222223333 355543311111 11 11
Q ss_pred -hhCCCCceeecccc
Q 006722 526 -SKAKKGTIFIPFSQ 539 (633)
Q Consensus 526 -~~a~~G~~f~~~~~ 539 (633)
..+++|+++++++-
T Consensus 78 l~~l~~~~iv~d~gs 92 (275)
T PRK08507 78 LLDIKENTTIIDLGS 92 (275)
T ss_pred HhccCCCCEEEECcc
Confidence 11567778887764
No 483
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=79.66 E-value=1.9 Score=46.45 Aligned_cols=116 Identities=15% Similarity=0.134 Sum_probs=64.5
Q ss_pred EEEEeccCccHHHHHHHHHhhc-CcEEEe-cChhHHHHHHHHhCCccccchhhhcccCcceEE--EEcCcCCHHHHhh-C
Q 006722 454 QVVLRGALTKVAYAIAFALCQK-GIQVVT-LREDEHEKLRKSFGAKSECNNLLLSRSYSQKIW--LVGKGLTEEEQSK-A 528 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~-~~~v~l-~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw--~vg~~~~~~~q~~-a 528 (633)
+|+++||||=+|..+.+.|.++ .++++- .++++ . .+ ...+..-.++|++ .++...+.+-=.. +
T Consensus 4 ~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~-~----~~-------~~~~~~~~~~DvvFlalp~~~s~~~~~~~~ 71 (313)
T PRK11863 4 KVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKR-K----DA-------AARRELLNAADVAILCLPDDAAREAVALID 71 (313)
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCC-C----cc-------cCchhhhcCCCEEEECCCHHHHHHHHHHHH
Confidence 6899999999999999999988 666655 22111 0 10 0011111145664 3444443332122 3
Q ss_pred CCCceeecccccCCCcccCC-C-CceeecCcccccCCccccccccc-cCCCcchhhh-HhhhhhhhhccCC
Q 006722 529 KKGTIFIPFSQFPPNDKKIR-K-DCMYHLTPAMAVPAAFENVDSCE-NWLPRRVMSA-WRIGGIVHALEGW 595 (633)
Q Consensus 529 ~~G~~f~~~~~~~~~~~~~R-~-dc~y~~~~a~~~p~~~~~~~~~e-~~~p~~~~~A-c~a~~~v~alEgw 595 (633)
.+|+.+||.| +..| + |..|. +|+ ++. +.-+ ..-.+.+.-+ |.+-+++++|--.
T Consensus 72 ~~g~~VIDlS------adfRl~~~~~yg------lPE-vn~-~~~~~i~~~~~IanPgC~~Ta~~laL~PL 128 (313)
T PRK11863 72 NPATRVIDAS------TAHRTAPGWVYG------FPE-LAP-GQRERIAAAKRVANPGCYPTGAIALLRPL 128 (313)
T ss_pred hCCCEEEECC------hhhhcCCCCeEE------cCc-cCH-HHHHHhhcCCeEEcCCcHHHHHHHHHHHH
Confidence 6799999999 7777 3 44443 444 110 0000 1111234444 9999999888544
No 484
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=79.63 E-value=1.9 Score=46.66 Aligned_cols=29 Identities=24% Similarity=0.385 Sum_probs=28.0
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
..|+|+|+.|=||+.++..|-++|..|+.
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~ 31 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRGYGVVI 31 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCCCcEEE
Confidence 58999999999999999999999999998
No 485
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=79.61 E-value=5.7 Score=44.01 Aligned_cols=80 Identities=16% Similarity=0.137 Sum_probs=52.7
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEecChhHHHHHHHHhCCccccchhhhcccCcceEEEEcC------------cC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVTLREDEHEKLRKSFGAKSECNNLLLSRSYSQKIWLVGK------------GL 520 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~vw~vg~------------~~ 520 (633)
++|-++|. |.||+++|+.|..-|.+|+..++.+-+ +. ...+...|.+..+ .+||+++-- -+
T Consensus 117 ktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp~~~~---~~--~~~~~~~L~ell~-~sDiI~lh~PLt~~g~~~T~~li 189 (378)
T PRK15438 117 RTVGIVGV-GNVGRRLQARLEALGIKTLLCDPPRAD---RG--DEGDFRSLDELVQ-EADILTFHTPLFKDGPYKTLHLA 189 (378)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCEEEEECCcccc---cc--cccccCCHHHHHh-hCCEEEEeCCCCCCccccccccc
Confidence 79999987 999999999998889999993322211 01 0111223444432 345543222 25
Q ss_pred CHHHHhhCCCCceeecccc
Q 006722 521 TEEEQSKAKKGTIFIPFSQ 539 (633)
Q Consensus 521 ~~~~q~~a~~G~~f~~~~~ 539 (633)
+.++-.++++|+++|..+|
T Consensus 190 ~~~~l~~mk~gailIN~aR 208 (378)
T PRK15438 190 DEKLIRSLKPGAILINACR 208 (378)
T ss_pred CHHHHhcCCCCcEEEECCC
Confidence 5666788999999999999
No 486
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=79.53 E-value=5.5 Score=39.44 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=34.6
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhC
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFG 495 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~ 495 (633)
-+.|++.|+.| +|.++++.+...|.+|.. +++++.+.+++ +|
T Consensus 135 ~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g 178 (271)
T cd05188 135 GDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKE-LG 178 (271)
T ss_pred CCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-hC
Confidence 36899999999 999999988888999887 77788777744 44
No 487
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=79.50 E-value=13 Score=40.58 Aligned_cols=176 Identities=16% Similarity=0.211 Sum_probs=99.2
Q ss_pred cccchhhHHHHHHHHHHHHHHHcCCcEEEecc----cccccc-------cccCCceEEeeCCC----------Ccceeec
Q 006722 377 LFQRQNESINRLIEEAILEAEEKGAKVISLGL----MNQGEE-------LNRYGGVFVHKHPQ----------LKMKVVD 435 (633)
Q Consensus 377 ~~~~~~~~in~~i~~Ai~~A~k~G~kv~~LG~----ln~~e~-------ln~~g~~~~~k~p~----------L~irvv~ 435 (633)
|..+-.-+-... |.|+ .++|.+++.|+. ++++|. |.+.....+.|+|. .+++|+.
T Consensus 53 F~epSTRTR~SF-e~A~---~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iv~R~~~~~~~~~~a~~~~vPVIN 128 (334)
T PRK01713 53 FEKTSTRTRCAF-EVAA---YDQGAQVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQSIVNELAEYAGVPVFN 128 (334)
T ss_pred eCCCCchHHHHH-HHHH---HHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEEcCchHHHHHHHHhCCCCEEE
Confidence 333443433444 5554 689999999974 344454 45667788889885 4689998
Q ss_pred CCh---------hHHHHHHhcCCC--CccEEEEeccC-ccHHHHHHHHHhhcCcEEEecChhHH----------HHHHHH
Q 006722 436 GSS---------LAVAVVINSIPK--GTTQVVLRGAL-TKVAYAIAFALCQKGIQVVTLREDEH----------EKLRKS 493 (633)
Q Consensus 436 Gns---------ltaavv~~~i~~--~~~~V~~~Gat-gkig~ava~~L~~~~~~v~l~~~~~~----------~~l~~~ 493 (633)
|.+ +=..++.+.... +-.+|+++|-. ..+++..+..+++-|.+|.+-.++.| +++.++
T Consensus 129 a~~~~~HPtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~ 208 (334)
T PRK01713 129 GLTDEFHPTQMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVRICAPKALLPEASLVEMCEKFAKE 208 (334)
T ss_pred CCCCCCChHHHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHH
Confidence 865 124667665432 22689999986 45999999988888999999222222 223233
Q ss_pred hCCcccc-chhhhcccCcceEEEEcCcCCHHHHhh--CCCCceeecccccCCCcccC--CCCcee-ecCcc
Q 006722 494 FGAKSEC-NNLLLSRSYSQKIWLVGKGLTEEEQSK--AKKGTIFIPFSQFPPNDKKI--RKDCMY-HLTPA 558 (633)
Q Consensus 494 l~~~~~~-~~l~~~~~~~~~vw~vg~~~~~~~q~~--a~~G~~f~~~~~~~~~~~~~--R~dc~y-~~~~a 558 (633)
-|..-+. .++.++.+ ++||+..+-|.+-.+|.. ...-..|-+|. +..+..+. |+||.+ |.+|+
T Consensus 209 ~g~~~~~~~d~~~a~~-~aDvVyt~~w~sm~~~~~~~~~~~~~~~~y~-v~~ell~~a~k~~aivmH~lP~ 277 (334)
T PRK01713 209 SGARITVTDDIDKAVK-GVDFVHTDVWVSMGEPLETWGERIKLLMPYQ-VTPELMKRTGNPKVKFMHCLPA 277 (334)
T ss_pred cCCeEEEEcCHHHHhC-CCCEEEEcceeecccchhhHHHHHHhccCCc-CCHHHHhccCCCCCEEECCCCC
Confidence 2222222 34444442 556655543332111000 00001334453 77765333 477775 66776
No 488
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=79.43 E-value=5.4 Score=42.62 Aligned_cols=107 Identities=20% Similarity=0.215 Sum_probs=66.3
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhH-HHHHHHHhCCccccchhhhcc-cCcceEEEE------cCcCCHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDE-HEKLRKSFGAKSECNNLLLSR-SYSQKIWLV------GKGLTEE 523 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~-~~~l~~~l~~~~~~~~l~~~~-~~~~~vw~v------g~~~~~~ 523 (633)
+|.++| +|-.|...|.-|.++|.+|.. |++++ -+.++++ |+.... +..+.. +.++.+-.| .+.+..+
T Consensus 2 kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~-Ga~~a~-s~~eaa~~aDvVitmv~~~~~V~~V~~g~ 78 (286)
T COG2084 2 KIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAA-GATVAA-SPAEAAAEADVVITMLPDDAAVRAVLFGE 78 (286)
T ss_pred eEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHc-CCcccC-CHHHHHHhCCEEEEecCCHHHHHHHHhCc
Confidence 456665 689999999999999999999 88888 5555554 333332 223222 223333211 1112111
Q ss_pred H--HhhCCCCceeecccccCCCcc-----cCC-CCceeecCcccccCC
Q 006722 524 E--QSKAKKGTIFIPFSQFPPNDK-----KIR-KDCMYHLTPAMAVPA 563 (633)
Q Consensus 524 ~--q~~a~~G~~f~~~~~~~~~~~-----~~R-~dc~y~~~~a~~~p~ 563 (633)
+ -..++||++|||.|-++|..+ ++. +-+.|.+-|++--+.
T Consensus 79 ~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~~ 126 (286)
T COG2084 79 NGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGVP 126 (286)
T ss_pred cchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEecCccCCch
Confidence 1 124889999999999988751 111 567788888765433
No 489
>PRK07680 late competence protein ComER; Validated
Probab=79.40 E-value=4.2 Score=42.25 Aligned_cols=40 Identities=10% Similarity=0.199 Sum_probs=33.5
Q ss_pred EEEEeccCccHHHHHHHHHhhcCc----EEEe--cChhHHHHHHHHh
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGI----QVVT--LREDEHEKLRKSF 494 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~----~v~l--~~~~~~~~l~~~l 494 (633)
+|.++| .|.+|+++++.|.+.|. +|.+ |++++.+.++++.
T Consensus 2 ~I~iIG-~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~ 47 (273)
T PRK07680 2 NIGFIG-TGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERY 47 (273)
T ss_pred EEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHc
Confidence 478999 69999999999999883 5666 8888888887764
No 490
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=79.37 E-value=3 Score=44.36 Aligned_cols=39 Identities=28% Similarity=0.334 Sum_probs=34.8
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+|.+.|| |.+|.++|..|.+.|.+|.+ |+++..+.++++
T Consensus 2 kI~IiGa-Ga~G~ala~~L~~~g~~V~l~~r~~~~~~~i~~~ 42 (326)
T PRK14620 2 KISILGA-GSFGTAIAIALSSKKISVNLWGRNHTTFESINTK 42 (326)
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHc
Confidence 4788898 89999999999999999988 888888888874
No 491
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=79.15 E-value=4.6 Score=43.55 Aligned_cols=130 Identities=15% Similarity=0.110 Sum_probs=83.0
Q ss_pred ceeecCChhHHHHHHhcC--CCCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccc-----
Q 006722 431 MKVVDGSSLAVAVVINSI--PKGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECN----- 501 (633)
Q Consensus 431 irvv~Gnsltaavv~~~i--~~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~----- 501 (633)
.-+.-+.++||++.+.+| |+.-++|+|-||+|.+|+.+-+.---.|-+|+= -++|+..-|+.++|.....+
T Consensus 131 lg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~ 210 (343)
T KOG1196|consen 131 LGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEES 210 (343)
T ss_pred hhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCcc
Confidence 445667899999999998 555599999999999999888755455888876 88999999999986653222
Q ss_pred hhhhcc----cCcceE-E--EEcCcCCHHHHhhCCCCceeecccccCCCcccCCCCceeecCcccccCCc
Q 006722 502 NLLLSR----SYSQKI-W--LVGKGLTEEEQSKAKKGTIFIPFSQFPPNDKKIRKDCMYHLTPAMAVPAA 564 (633)
Q Consensus 502 ~l~~~~----~~~~~v-w--~vg~~~~~~~q~~a~~G~~f~~~~~~~~~~~~~R~dc~y~~~~a~~~p~~ 564 (633)
++.++. ...+|| | +-|+.+|+.=...-+.| +.+-.-+++... ...+ -..++..+.+-+.
T Consensus 211 ~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~g-ri~~CG~ISqYN--~~~~-~~~~~l~~ii~Kr 276 (343)
T KOG1196|consen 211 DLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHG-RIAVCGMISQYN--LENP-EGLHNLSTIIYKR 276 (343)
T ss_pred CHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhcc-ceEeeeeehhcc--ccCC-ccccchhhheeee
Confidence 222222 225577 4 66777766554433333 233333355443 2211 3334445555553
No 492
>PLN02256 arogenate dehydrogenase
Probab=79.02 E-value=3.1 Score=44.51 Aligned_cols=108 Identities=13% Similarity=0.208 Sum_probs=58.1
Q ss_pred CCcceeecCChhHH--HHHHhcCCC-CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccch
Q 006722 428 QLKMKVVDGSSLAV--AVVINSIPK-GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNN 502 (633)
Q Consensus 428 ~L~irvv~Gnslta--avv~~~i~~-~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~ 502 (633)
.|++|-+|...--- .-.-+++.+ ...+|.++| .|.+|.++|+.|.+.|.+|.. ++++ .+..++.|... ..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIG-~G~mG~slA~~L~~~G~~V~~~d~~~~--~~~a~~~gv~~-~~~ 84 (304)
T PLN02256 9 SLRVRAIDAAQPFDYESRLQEELEKSRKLKIGIVG-FGNFGQFLAKTFVKQGHTVLATSRSDY--SDIAAELGVSF-FRD 84 (304)
T ss_pred CcccccccccCCCChHhHHhHhhccCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECccH--HHHHHHcCCee-eCC
Confidence 46666665422110 012234433 336899999 699999999999998988887 4442 34444554422 123
Q ss_pred hhhcccCcceEEEEcCcC--CHH--HH---hhCCCCceeecccc
Q 006722 503 LLLSRSYSQKIWLVGKGL--TEE--EQ---SKAKKGTIFIPFSQ 539 (633)
Q Consensus 503 l~~~~~~~~~vw~vg~~~--~~~--~q---~~a~~G~~f~~~~~ 539 (633)
+.+....++|++++--.. ..+ ++ ..+++|+++++++.
T Consensus 85 ~~e~~~~~aDvVilavp~~~~~~vl~~l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 85 PDDFCEEHPDVVLLCTSILSTEAVLRSLPLQRLKRSTLFVDVLS 128 (304)
T ss_pred HHHHhhCCCCEEEEecCHHHHHHHHHhhhhhccCCCCEEEecCC
Confidence 333322235554331111 111 11 12567888888875
No 493
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=78.82 E-value=4.3 Score=44.35 Aligned_cols=59 Identities=27% Similarity=0.302 Sum_probs=42.6
Q ss_pred hHHHHHHhcCC------CCc--cEEEEeccCccHHHHHHHHHhhcC-cEEEe-cChhHHHHHHHHhCCcc
Q 006722 439 LAVAVVINSIP------KGT--TQVVLRGALTKVAYAIAFALCQKG-IQVVT-LREDEHEKLRKSFGAKS 498 (633)
Q Consensus 439 ltaavv~~~i~------~~~--~~V~~~Gatgkig~ava~~L~~~~-~~v~l-~~~~~~~~l~~~l~~~~ 498 (633)
+||+..+.+.. +.. +.|++.||+|+||.+.++.....| .+|+. .++|.++ +.+++|+..
T Consensus 137 ~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~lGAd~ 205 (347)
T KOG1198|consen 137 LTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKLGADE 205 (347)
T ss_pred HHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHcCCcE
Confidence 45555566655 322 689999999999999999887778 67766 6666655 456677655
No 494
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=78.80 E-value=5.8 Score=40.75 Aligned_cols=40 Identities=25% Similarity=0.234 Sum_probs=35.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHH
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRK 492 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 492 (633)
..|++.|+++.+|.++++.+..+|.++.+ +++++.+.+++
T Consensus 168 ~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 209 (342)
T cd08266 168 ETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE 209 (342)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 68999999999999999999999999887 88888887743
No 495
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=78.75 E-value=5.1 Score=41.91 Aligned_cols=85 Identities=14% Similarity=0.119 Sum_probs=52.1
Q ss_pred ccEEEEeccCccHHHHHHHHHhhcC-cEEEe--cChhHHHHHHHHhCCcccc---chhh----hccc-CcceEE--EEcC
Q 006722 452 TTQVVLRGALTKVAYAIAFALCQKG-IQVVT--LREDEHEKLRKSFGAKSEC---NNLL----LSRS-YSQKIW--LVGK 518 (633)
Q Consensus 452 ~~~V~~~Gatgkig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~l~~~~~~---~~l~----~~~~-~~~~vw--~vg~ 518 (633)
-..|++.|+++ +|.++++.+.+.| .+|.. +++++.+.+ +++|..... +... +.+. ...+++ .+|.
T Consensus 168 ~~~vlI~g~~~-vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~~~~dvvld~~g~ 245 (340)
T cd05284 168 GSTVVVIGVGG-LGHIAVQILRALTPATVIAVDRSEEALKLA-ERLGADHVLNASDDVVEEVRELTGGRGADAVIDFVGS 245 (340)
T ss_pred CCEEEEEcCcH-HHHHHHHHHHHhCCCcEEEEeCCHHHHHHH-HHhCCcEEEcCCccHHHHHHHHhCCCCCCEEEEcCCC
Confidence 37899999655 9999999888888 88876 788898888 566653222 1111 1221 134554 2331
Q ss_pred -cCCHHHHhhCCCCceeeccc
Q 006722 519 -GLTEEEQSKAKKGTIFIPFS 538 (633)
Q Consensus 519 -~~~~~~q~~a~~G~~f~~~~ 538 (633)
....+--+.++++..|+.+.
T Consensus 246 ~~~~~~~~~~l~~~g~~i~~g 266 (340)
T cd05284 246 DETLALAAKLLAKGGRYVIVG 266 (340)
T ss_pred HHHHHHHHHHhhcCCEEEEEc
Confidence 22222234566777777775
No 496
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=78.70 E-value=3.3 Score=43.49 Aligned_cols=39 Identities=18% Similarity=0.311 Sum_probs=35.1
Q ss_pred EEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 454 QVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 454 ~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
+|.++|+ |.+|+++|..|++.|.+|.+ |++++.++++++
T Consensus 3 kI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~ 43 (325)
T PRK00094 3 KIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINAD 43 (325)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc
Confidence 5889986 99999999999999999988 888999988876
No 497
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=78.56 E-value=3.5 Score=45.59 Aligned_cols=28 Identities=29% Similarity=0.353 Sum_probs=26.3
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT 481 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l 481 (633)
+.|+|+|+++ +|.++|+.|.++|.+|.+
T Consensus 6 k~v~v~G~g~-~G~s~a~~l~~~G~~V~~ 33 (447)
T PRK02472 6 KKVLVLGLAK-SGYAAAKLLHKLGANVTV 33 (447)
T ss_pred CEEEEEeeCH-HHHHHHHHHHHCCCEEEE
Confidence 5789999987 999999999999999999
No 498
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=78.49 E-value=7.9 Score=39.25 Aligned_cols=43 Identities=26% Similarity=0.288 Sum_probs=36.5
Q ss_pred cEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCC
Q 006722 453 TQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGA 496 (633)
Q Consensus 453 ~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~ 496 (633)
..|++.|++|.+|.++++.+..+|.+|.. +++++.+.++ ++|.
T Consensus 141 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~ 185 (323)
T cd08241 141 ETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGA 185 (323)
T ss_pred CEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCC
Confidence 68999999999999999999999999887 7778888774 4554
No 499
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=78.39 E-value=4.3 Score=43.94 Aligned_cols=43 Identities=14% Similarity=0.158 Sum_probs=35.7
Q ss_pred CCccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHH
Q 006722 450 KGTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKS 493 (633)
Q Consensus 450 ~~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 493 (633)
.+.++|.|+|+ |-+|+.+|..+++.|.+|++ ++++..+.+++.
T Consensus 5 ~~i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~ 49 (321)
T PRK07066 5 TDIKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRAN 49 (321)
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 35678999997 89999999999999999999 777776665543
No 500
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=78.32 E-value=5.7 Score=41.40 Aligned_cols=98 Identities=14% Similarity=0.120 Sum_probs=55.8
Q ss_pred hHHHHHHhcCCC-CccEEEEeccCccHHHHHHHHHhhcCcEEEe--cChhHHHHHHHHhCCccccch----hhhcccCcc
Q 006722 439 LAVAVVINSIPK-GTTQVVLRGALTKVAYAIAFALCQKGIQVVT--LREDEHEKLRKSFGAKSECNN----LLLSRSYSQ 511 (633)
Q Consensus 439 ltaavv~~~i~~-~~~~V~~~Gatgkig~ava~~L~~~~~~v~l--~~~~~~~~l~~~l~~~~~~~~----l~~~~~~~~ 511 (633)
+||...++.... ...+|++.|+++ +|.++++.+..+|.+|.. +++++.+.++ ++|....... ..+......
T Consensus 149 ~ta~~~l~~~~~~~~~~vlI~g~g~-iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~ 226 (330)
T cd08245 149 ITVYSALRDAGPRPGERVAVLGIGG-LGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDSGAELDEQAAAGGA 226 (330)
T ss_pred HHHHHHHHhhCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEeccCCcchHHhccCCC
Confidence 344444444322 226788887645 999998888888999887 8888988884 4553222111 111111123
Q ss_pred eEEEE--c-CcCCHHHHhhCCCCceeeccc
Q 006722 512 KIWLV--G-KGLTEEEQSKAKKGTIFIPFS 538 (633)
Q Consensus 512 ~vw~v--g-~~~~~~~q~~a~~G~~f~~~~ 538 (633)
++++- | .....+-.+.++++-.|+.++
T Consensus 227 d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~ 256 (330)
T cd08245 227 DVILVTVVSGAAAEAALGGLRRGGRIVLVG 256 (330)
T ss_pred CEEEECCCcHHHHHHHHHhcccCCEEEEEC
Confidence 44321 2 112233345677777888776
Done!