BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006724
         (633 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana
           GN=At1g04910 PE=1 SV=1
          Length = 519

 Score =  268 bits (686), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 176/498 (35%), Positives = 260/498 (52%), Gaps = 44/498 (8%)

Query: 153 GLVLARMFKDDWVFSQRVVAEDNKQEPSMPIRVLEKISTPEIWMKPNSDNYYQCIARPKS 212
           G+++  +     +FS  +    + +EP+ P     KI+  E+W    S  +    A    
Sbjct: 28  GVIVLLICTLSLLFSANI---GSNREPTRP----SKINVEELWESAKSGGWRPSSAPRSD 80

Query: 213 QISNNKKTNGYIVVHANGGLNQMRTGICDMVAVAKIMNATLVLPLLDHESFWTDPSDFKD 272
                K+TNGY+ V  NGGLNQ R+ IC+ V  A+IMNATLVLP LD  SFW D S F+ 
Sbjct: 81  WPPPTKETNGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFQG 140

Query: 273 IFDWRHFMNVLKDDVNIVEYLPTRYARKK----------PLLKAPVSWSKASYYRNEMVP 322
           I+D  HF+  LK DV IV  +P  +   K          P   AP+ W     Y    + 
Sbjct: 141 IYDVEHFIETLKYDVKIVGKIPDVHKNGKTKKIKAFQIRPPRDAPIEW-----YLTTALK 195

Query: 323 LLKKHKVIKFSHTDSRLANNGLAGSIQRLRCRANYEALRYSKDIEDLGKILVDRLRNNSE 382
            +++H  I  +    RLA        QRLRCR NY ALR+   I  L + +VD+LR+   
Sbjct: 196 AMREHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPHIMKLSESIVDKLRSQGH 255

Query: 383 PYVALHLRYEKDMLAFTGCSHNLTAEEAEDLRVMRYNVKHWKEKEIDGIKRRLQGGCPMS 442
            ++++HLR+E DMLAF GC      EE + LR  +Y  +++ +K +   +RR  G CP++
Sbjct: 256 -FMSIHLRFEMDMLAFAGCFDIFNPEEQKILR--KYRKENFADKRLIYNERRAIGKCPLT 312

Query: 443 PREAALFLKALGYPSTTTIYIVAGEIYGSSS-MAAFREEFPNVFSHSTLATEEELEPFKP 501
           P E  L L+A+ + ++T IY+ AGE++G    M  FR  FP + +HS++   EEL     
Sbjct: 313 PEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRLDNHSSVDPSEELSATS- 371

Query: 502 YQNRL-AALDYLVALESDVFVHTYDG--NMAKAVQGHRRFEGFRKSINPDKQNIVRLIDQ 558
            Q  + +A+DY+V L SD+F+ TYDG  N A  + GHR + GFR +I PD++ +  +   
Sbjct: 372 -QGLIGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRTTIRPDRKALAPIFIA 430

Query: 559 LDEGA-ISWEEFSSEVKSLHSDRLGGPYLRQPGESPRLEENFYANPFPGCICD----RSQ 613
            ++G    +EE    V  +     GGP+ R    SP   E+FY N +P C C     +S 
Sbjct: 431 REKGKRAGFEEAVRRV--MLKTNFGGPHKRV---SP---ESFYTNSWPECFCQMNPKKSS 482

Query: 614 ERVAGLKLDERLSSRAAS 631
           ++     + E L SR  S
Sbjct: 483 DKCPPNNVIEILDSRLES 500


>sp|Q6R7H1|Y054_OSHVF Uncharacterized protein ORF54 OS=Ostreid herpesvirus 1 (isolate
           France) GN=ORF54 PE=4 SV=1
          Length = 807

 Score = 37.4 bits (85), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 64/170 (37%), Gaps = 37/170 (21%)

Query: 432 KRRLQGGCPMS-------PREAALFLKALGYPSTTTIYIVAGEIYGSSSMAAFREEFPNV 484
           +  +  GC +S       PR         G P TT IY        S +MAA  E     
Sbjct: 553 RMEISCGCSLSASHFKLNPRIGGCEKSLEGVPKTTKIY--------SRNMAAVTE----- 599

Query: 485 FSHSTLATEEELEPFKPYQNRLAALDYLVALESDVFVHTYDGNMAKAVQGHRRFEGFRKS 544
                  T+E+L+    Y  R+  L   + +E   F  TYD   A A +  +  + F K 
Sbjct: 600 -----FVTDEDLKLVNSYSARVDKLYPPIKMEKLEF-KTYDNVEAYAEKSRKYGQDFIKG 653

Query: 545 INPDKQNIVRLIDQLDEGAISWEEFSSEV-----------KSLHSDRLGG 583
               K+N+    D++DEG     +FS +V             L +D  GG
Sbjct: 654 AELMKKNLTIYKDKVDEGLKKARDFSDQVVDREGSIINAISGLFTDIFGG 703


>sp|Q9QSP0|L_ABLVB Large structural protein OS=Australian bat lyssavirus (isolate
            Bat/AUS/1996) GN=L PE=3 SV=2
          Length = 2128

 Score = 32.7 bits (73), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 18/26 (69%)

Query: 257  LLDHESFWTDPSDFKDIFDWRHFMNV 282
            ++D ES W  PSD +++  WR+F +V
Sbjct: 1759 VIDFESIWEKPSDLRNLSTWRYFQSV 1784


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.133    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 242,414,513
Number of Sequences: 539616
Number of extensions: 10537805
Number of successful extensions: 48948
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 43198
Number of HSP's gapped (non-prelim): 4912
length of query: 633
length of database: 191,569,459
effective HSP length: 124
effective length of query: 509
effective length of database: 124,657,075
effective search space: 63450451175
effective search space used: 63450451175
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)