Query 006731
Match_columns 633
No_of_seqs 607 out of 3560
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 07:27:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006731.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006731hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hc4_A Protein arginine N-meth 100.0 8.7E-66 3E-70 551.4 25.3 323 256-628 42-375 (376)
2 3q7e_A Protein arginine N-meth 100.0 4.6E-53 1.6E-57 451.5 29.5 318 258-632 27-348 (349)
3 1g6q_1 HnRNP arginine N-methyl 100.0 3E-52 1E-56 441.5 29.2 319 261-632 2-327 (328)
4 2fyt_A Protein arginine N-meth 100.0 1.5E-51 5.2E-56 438.2 32.2 314 256-628 23-340 (340)
5 3r0q_C Probable protein argini 100.0 7.3E-51 2.5E-55 438.7 30.1 317 258-623 24-366 (376)
6 3ua3_A Protein arginine N-meth 100.0 2.6E-46 8.9E-51 418.8 23.6 294 270-628 377-726 (745)
7 4gqb_A Protein arginine N-meth 100.0 3.7E-46 1.3E-50 420.2 24.2 276 272-615 324-619 (637)
8 2y1w_A Histone-arginine methyl 100.0 1.2E-44 4E-49 386.3 30.4 303 258-614 11-323 (348)
9 3b3j_A Histone-arginine methyl 100.0 1.9E-41 6.5E-46 375.5 26.9 301 259-613 120-430 (480)
10 1wir_A Protein arginine N-meth 100.0 1.2E-30 4.1E-35 232.2 2.7 97 43-160 12-108 (121)
11 3g5l_A Putative S-adenosylmeth 99.6 1.4E-14 4.8E-19 145.9 13.9 138 257-422 8-145 (253)
12 3kkz_A Uncharacterized protein 99.6 2.9E-14 1E-18 145.0 15.0 115 289-424 37-152 (267)
13 4gek_A TRNA (CMO5U34)-methyltr 99.6 2.3E-14 7.9E-19 146.3 14.0 107 295-421 68-177 (261)
14 3f4k_A Putative methyltransfer 99.6 3.8E-14 1.3E-18 142.8 15.0 109 294-423 43-151 (257)
15 3p9n_A Possible methyltransfer 99.5 2.3E-14 7.9E-19 138.2 12.3 109 296-422 43-153 (189)
16 3mti_A RRNA methylase; SAM-dep 99.5 6E-14 2.1E-18 134.4 13.7 108 295-421 20-134 (185)
17 1nkv_A Hypothetical protein YJ 99.5 5.8E-14 2E-18 141.3 13.5 117 285-422 24-140 (256)
18 3jwh_A HEN1; methyltransferase 99.5 7.1E-14 2.4E-18 137.5 13.2 113 296-422 28-141 (217)
19 3bus_A REBM, methyltransferase 99.5 1E-13 3.5E-18 141.0 14.8 118 285-422 49-166 (273)
20 1pjz_A Thiopurine S-methyltran 99.5 1.9E-14 6.6E-19 140.9 9.0 118 294-419 19-137 (203)
21 3jwg_A HEN1, methyltransferase 99.5 6.4E-14 2.2E-18 137.9 12.8 107 296-420 28-139 (219)
22 3vc1_A Geranyl diphosphate 2-C 99.5 1.4E-13 4.7E-18 143.6 15.8 113 287-421 106-220 (312)
23 3hem_A Cyclopropane-fatty-acyl 99.5 2.6E-13 8.9E-18 140.7 16.8 117 285-422 60-183 (302)
24 3ofk_A Nodulation protein S; N 99.5 1E-13 3.4E-18 136.1 12.7 116 284-421 38-153 (216)
25 1vl5_A Unknown conserved prote 99.5 7.1E-14 2.4E-18 141.4 11.8 106 294-421 34-139 (260)
26 3njr_A Precorrin-6Y methylase; 99.5 2.1E-13 7.3E-18 133.7 14.7 108 289-422 47-154 (204)
27 1ve3_A Hypothetical protein PH 99.5 1.7E-13 5.8E-18 135.1 14.0 119 280-421 23-141 (227)
28 3thr_A Glycine N-methyltransfe 99.5 2.1E-14 7.1E-19 147.8 7.3 133 278-422 38-175 (293)
29 3dlc_A Putative S-adenosyl-L-m 99.5 1.2E-13 4E-18 135.0 11.8 113 288-421 35-147 (219)
30 1wzn_A SAM-dependent methyltra 99.5 3.4E-13 1.1E-17 135.5 15.5 113 289-422 33-145 (252)
31 2pxx_A Uncharacterized protein 99.5 7E-14 2.4E-18 136.3 10.1 117 284-422 31-159 (215)
32 2esr_A Methyltransferase; stru 99.5 7.9E-14 2.7E-18 132.6 10.1 108 295-422 29-138 (177)
33 2o57_A Putative sarcosine dime 99.5 1.5E-13 5.1E-18 141.8 12.9 108 294-422 79-187 (297)
34 1ri5_A MRNA capping enzyme; me 99.5 2E-13 6.7E-18 140.3 13.7 111 295-422 62-174 (298)
35 3e05_A Precorrin-6Y C5,15-meth 99.5 3.5E-13 1.2E-17 131.3 14.7 111 287-421 30-141 (204)
36 2xvm_A Tellurite resistance pr 99.5 3.6E-13 1.2E-17 129.8 14.0 106 294-420 29-134 (199)
37 2gb4_A Thiopurine S-methyltran 99.5 1.4E-13 4.9E-18 139.6 11.6 112 296-420 67-189 (252)
38 4htf_A S-adenosylmethionine-de 99.5 4.7E-13 1.6E-17 137.3 15.4 106 297-422 68-173 (285)
39 1zx0_A Guanidinoacetate N-meth 99.5 1.4E-13 4.8E-18 137.5 11.0 108 296-422 59-170 (236)
40 1y8c_A S-adenosylmethionine-de 99.5 1.4E-13 4.6E-18 137.2 10.8 105 296-421 36-141 (246)
41 3d2l_A SAM-dependent methyltra 99.5 4.4E-13 1.5E-17 133.5 14.1 118 281-422 19-137 (243)
42 2fhp_A Methylase, putative; al 99.5 1.1E-13 3.8E-18 132.2 9.3 111 295-422 42-154 (187)
43 1xtp_A LMAJ004091AAA; SGPP, st 99.5 3.7E-13 1.3E-17 135.1 13.4 117 285-422 81-197 (254)
44 2ift_A Putative methylase HI07 99.5 7.7E-14 2.6E-18 136.4 8.2 110 297-424 53-165 (201)
45 2ex4_A Adrenal gland protein A 99.5 4E-13 1.4E-17 134.4 13.6 107 297-422 79-185 (241)
46 3mgg_A Methyltransferase; NYSG 99.5 3.4E-13 1.2E-17 137.5 13.1 118 284-422 24-142 (276)
47 1xxl_A YCGJ protein; structura 99.5 2E-13 6.7E-18 136.7 10.9 106 294-421 18-123 (239)
48 3orh_A Guanidinoacetate N-meth 99.4 1.6E-13 5.3E-18 137.8 10.0 109 296-421 59-169 (236)
49 3sm3_A SAM-dependent methyltra 99.4 5.1E-13 1.7E-17 132.0 13.5 112 296-421 29-140 (235)
50 1kpg_A CFA synthase;, cyclopro 99.4 1E-12 3.5E-17 134.8 16.3 116 285-422 52-168 (287)
51 2fpo_A Methylase YHHF; structu 99.4 1.4E-13 4.8E-18 134.6 9.1 105 297-422 54-160 (202)
52 3bkw_A MLL3908 protein, S-aden 99.4 3E-13 1E-17 134.7 11.6 111 288-422 34-144 (243)
53 3dh0_A SAM dependent methyltra 99.4 2E-13 6.7E-18 134.2 10.1 107 294-421 34-142 (219)
54 3dtn_A Putative methyltransfer 99.4 6.2E-13 2.1E-17 132.1 13.3 114 287-422 33-148 (234)
55 2fk8_A Methoxy mycolic acid sy 99.4 1.3E-12 4.6E-17 136.2 16.4 116 285-422 78-194 (318)
56 3ujc_A Phosphoethanolamine N-m 99.4 5.8E-13 2E-17 134.3 12.9 114 287-422 45-159 (266)
57 3lpm_A Putative methyltransfer 99.4 4.3E-13 1.5E-17 136.2 11.9 112 294-420 45-174 (259)
58 2a14_A Indolethylamine N-methy 99.4 4.2E-14 1.5E-18 144.0 4.3 129 294-422 52-197 (263)
59 4hg2_A Methyltransferase type 99.4 1.6E-13 5.4E-18 139.8 8.4 105 285-420 29-133 (257)
60 2yqz_A Hypothetical protein TT 99.4 1.1E-12 3.9E-17 132.0 14.6 115 284-421 25-140 (263)
61 3g5t_A Trans-aconitate 3-methy 99.4 8.9E-13 3E-17 136.4 14.1 115 285-421 25-148 (299)
62 3eey_A Putative rRNA methylase 99.4 7.9E-13 2.7E-17 127.9 12.8 110 295-421 20-138 (197)
63 2frn_A Hypothetical protein PH 99.4 3.6E-13 1.2E-17 138.6 10.9 102 296-422 124-225 (278)
64 3hm2_A Precorrin-6Y C5,15-meth 99.4 6.4E-13 2.2E-17 125.9 11.5 112 287-422 15-127 (178)
65 2p8j_A S-adenosylmethionine-de 99.4 9.2E-13 3.1E-17 128.2 12.9 120 279-422 8-128 (209)
66 2p7i_A Hypothetical protein; p 99.4 3.2E-13 1.1E-17 134.5 9.8 100 296-422 41-141 (250)
67 3ocj_A Putative exported prote 99.4 4.9E-13 1.7E-17 138.9 11.4 124 279-422 102-227 (305)
68 3lec_A NADB-rossmann superfami 99.4 1.3E-12 4.3E-17 130.5 13.8 105 295-421 19-124 (230)
69 3gnl_A Uncharacterized protein 99.4 1.1E-12 3.6E-17 132.1 13.1 111 287-421 13-124 (244)
70 2vdw_A Vaccinia virus capping 99.4 6.7E-13 2.3E-17 138.3 12.1 117 297-423 48-170 (302)
71 1dus_A MJ0882; hypothetical pr 99.4 1.7E-12 5.8E-17 124.0 13.7 112 289-421 44-156 (194)
72 3g2m_A PCZA361.24; SAM-depende 99.4 4.5E-13 1.5E-17 138.7 10.2 109 297-422 82-190 (299)
73 3kr9_A SAM-dependent methyltra 99.4 1.8E-12 6.2E-17 129.0 13.8 104 295-421 13-118 (225)
74 3l8d_A Methyltransferase; stru 99.4 5.2E-13 1.8E-17 133.0 9.7 111 285-422 43-153 (242)
75 3m70_A Tellurite resistance pr 99.4 1.1E-12 3.7E-17 134.7 12.3 103 296-420 119-221 (286)
76 3gu3_A Methyltransferase; alph 99.4 1.8E-12 6.1E-17 133.3 13.6 117 285-424 9-128 (284)
77 2kw5_A SLR1183 protein; struct 99.4 1.7E-12 5.7E-17 125.9 12.3 102 296-421 29-130 (202)
78 3lbf_A Protein-L-isoaspartate 99.4 2.3E-12 7.8E-17 125.9 13.3 109 287-423 67-175 (210)
79 3ou2_A SAM-dependent methyltra 99.4 2.4E-12 8.3E-17 125.8 13.5 103 295-422 44-146 (218)
80 3uwp_A Histone-lysine N-methyl 99.4 1.1E-12 3.8E-17 140.3 11.9 114 288-421 164-287 (438)
81 1xdz_A Methyltransferase GIDB; 99.4 9.9E-13 3.4E-17 131.9 10.8 100 296-420 69-172 (240)
82 3pfg_A N-methyltransferase; N, 99.4 1.4E-12 4.8E-17 132.0 11.7 110 285-421 40-150 (263)
83 3g89_A Ribosomal RNA small sub 99.4 1.4E-12 4.8E-17 132.1 11.6 104 295-420 78-182 (249)
84 3lcc_A Putative methyl chlorid 99.4 1.2E-12 4.2E-17 130.2 10.8 105 296-420 65-169 (235)
85 3fpf_A Mtnas, putative unchara 99.4 3.6E-12 1.2E-16 131.6 14.3 102 293-421 118-221 (298)
86 3grz_A L11 mtase, ribosomal pr 99.4 2E-12 6.7E-17 126.0 11.6 99 296-420 59-157 (205)
87 3h2b_A SAM-dependent methyltra 99.4 1.3E-12 4.4E-17 126.9 10.1 100 298-422 42-141 (203)
88 2yxd_A Probable cobalt-precorr 99.4 3.4E-12 1.1E-16 120.9 12.6 106 288-422 26-131 (183)
89 1l3i_A Precorrin-6Y methyltran 99.4 2.8E-12 9.6E-17 122.3 12.1 111 287-422 23-134 (192)
90 2gs9_A Hypothetical protein TT 99.4 2.1E-12 7.2E-17 126.1 11.2 105 286-421 27-131 (211)
91 2ozv_A Hypothetical protein AT 99.4 1.9E-12 6.6E-17 131.8 10.9 115 292-420 31-168 (260)
92 3hnr_A Probable methyltransfer 99.4 1.2E-12 4.3E-17 128.5 9.2 101 296-421 44-144 (220)
93 1fbn_A MJ fibrillarin homologu 99.4 4.2E-12 1.4E-16 126.4 13.1 106 290-421 67-177 (230)
94 2nxc_A L11 mtase, ribosomal pr 99.4 2.2E-12 7.7E-17 130.8 11.2 109 284-421 109-217 (254)
95 3iv6_A Putative Zn-dependent a 99.3 7.3E-12 2.5E-16 127.6 14.7 113 287-422 35-148 (261)
96 2b78_A Hypothetical protein SM 99.3 3.2E-12 1.1E-16 137.6 12.2 115 296-423 211-332 (385)
97 3evz_A Methyltransferase; NYSG 99.3 4.9E-12 1.7E-16 125.3 12.6 108 295-420 53-177 (230)
98 3bxo_A N,N-dimethyltransferase 99.3 5.3E-12 1.8E-16 125.3 12.8 111 284-421 29-140 (239)
99 1nt2_A Fibrillarin-like PRE-rR 99.3 5.1E-12 1.8E-16 124.5 12.4 106 294-421 54-160 (210)
100 3k6r_A Putative transferase PH 99.3 2.2E-12 7.6E-17 132.5 10.1 100 295-419 123-222 (278)
101 2i62_A Nicotinamide N-methyltr 99.3 1.6E-12 5.4E-17 131.2 8.8 126 294-422 53-198 (265)
102 3u81_A Catechol O-methyltransf 99.3 2.9E-12 9.8E-17 126.8 10.5 110 296-424 57-172 (221)
103 2igt_A SAM dependent methyltra 99.3 2.5E-12 8.4E-17 135.8 10.6 111 296-420 152-270 (332)
104 2avn_A Ubiquinone/menaquinone 99.3 5.7E-12 1.9E-16 127.7 12.8 110 284-422 43-152 (260)
105 3dxy_A TRNA (guanine-N(7)-)-me 99.3 3.6E-12 1.2E-16 126.5 11.0 110 297-422 34-150 (218)
106 3gdh_A Trimethylguanosine synt 99.3 4.3E-13 1.5E-17 134.1 4.3 105 296-422 77-181 (241)
107 3g07_A 7SK snRNA methylphospha 99.3 2.4E-12 8.3E-17 133.1 10.1 127 295-421 44-219 (292)
108 3bkx_A SAM-dependent methyltra 99.3 4E-12 1.4E-16 129.4 11.4 114 288-421 34-158 (275)
109 1ws6_A Methyltransferase; stru 99.3 1.3E-12 4.6E-17 122.6 7.2 105 297-422 41-147 (171)
110 3dr5_A Putative O-methyltransf 99.3 6.4E-12 2.2E-16 124.9 12.3 120 284-423 43-164 (221)
111 3tfw_A Putative O-methyltransf 99.3 5.6E-12 1.9E-16 127.3 12.0 106 296-422 62-170 (248)
112 1jsx_A Glucose-inhibited divis 99.3 2.1E-12 7.2E-17 125.7 8.5 99 297-421 65-164 (207)
113 1yzh_A TRNA (guanine-N(7)-)-me 99.3 1.1E-11 3.6E-16 122.0 13.5 109 297-421 41-155 (214)
114 3fzg_A 16S rRNA methylase; met 99.3 2.5E-12 8.5E-17 123.9 8.6 110 284-419 38-149 (200)
115 3ntv_A MW1564 protein; rossman 99.3 4.1E-12 1.4E-16 126.9 10.6 104 296-421 70-175 (232)
116 3dmg_A Probable ribosomal RNA 99.3 6.9E-12 2.4E-16 134.8 12.8 119 283-421 217-339 (381)
117 3dli_A Methyltransferase; PSI- 99.3 4.5E-12 1.6E-16 126.6 10.6 100 295-422 39-140 (240)
118 3bgv_A MRNA CAP guanine-N7 met 99.3 8.8E-12 3E-16 129.8 12.9 120 296-422 33-155 (313)
119 2p35_A Trans-aconitate 2-methy 99.3 9E-12 3.1E-16 125.3 12.5 107 288-422 24-132 (259)
120 4fsd_A Arsenic methyltransfera 99.3 5.6E-12 1.9E-16 135.5 11.5 113 295-422 81-203 (383)
121 3duw_A OMT, O-methyltransferas 99.3 5.6E-12 1.9E-16 124.4 10.6 108 296-422 57-167 (223)
122 2ipx_A RRNA 2'-O-methyltransfe 99.3 1.3E-11 4.3E-16 123.0 13.3 108 292-421 72-181 (233)
123 3cgg_A SAM-dependent methyltra 99.3 1.2E-11 4E-16 118.2 12.3 102 295-421 44-146 (195)
124 2fca_A TRNA (guanine-N(7)-)-me 99.3 1.1E-11 3.7E-16 122.3 12.2 109 297-421 38-152 (213)
125 4dcm_A Ribosomal RNA large sub 99.3 1E-11 3.4E-16 133.3 12.9 119 286-420 211-332 (375)
126 3ege_A Putative methyltransfer 99.3 2.7E-12 9.3E-17 130.2 8.0 108 285-421 22-129 (261)
127 3bzb_A Uncharacterized protein 99.3 1.5E-11 5.1E-16 126.6 13.6 126 283-420 65-203 (281)
128 4df3_A Fibrillarin-like rRNA/T 99.3 1.8E-11 6.3E-16 122.4 13.8 114 286-421 63-181 (233)
129 1dl5_A Protein-L-isoaspartate 99.3 1.1E-11 3.7E-16 129.8 12.6 111 286-423 64-176 (317)
130 3ccf_A Cyclopropane-fatty-acyl 99.3 5.6E-12 1.9E-16 129.0 9.9 100 294-421 54-153 (279)
131 3mb5_A SAM-dependent methyltra 99.3 7.8E-12 2.7E-16 125.9 10.8 108 288-421 84-193 (255)
132 3e23_A Uncharacterized protein 99.3 1.3E-11 4.4E-16 120.6 11.9 100 295-421 41-140 (211)
133 3ggd_A SAM-dependent methyltra 99.3 1.2E-11 4.1E-16 123.7 11.6 107 295-420 54-161 (245)
134 3tr6_A O-methyltransferase; ce 99.3 6.6E-12 2.2E-16 124.0 9.5 106 296-422 63-174 (225)
135 3i9f_A Putative type 11 methyl 99.3 2.8E-12 9.5E-17 120.9 6.4 97 295-421 15-111 (170)
136 2b3t_A Protein methyltransfera 99.3 2.2E-11 7.6E-16 124.7 13.6 119 282-421 95-237 (276)
137 2g72_A Phenylethanolamine N-me 99.3 6.5E-12 2.2E-16 129.3 9.5 126 296-421 70-214 (289)
138 1u2z_A Histone-lysine N-methyl 99.3 2.6E-11 9E-16 131.8 14.3 120 286-421 231-358 (433)
139 2pwy_A TRNA (adenine-N(1)-)-me 99.3 1.7E-11 5.7E-16 123.4 11.8 108 288-421 87-197 (258)
140 2yxe_A Protein-L-isoaspartate 99.3 2.2E-11 7.6E-16 119.3 12.3 109 287-422 67-177 (215)
141 3tma_A Methyltransferase; thum 99.3 2.3E-11 8E-16 129.2 13.1 120 285-422 191-317 (354)
142 3m33_A Uncharacterized protein 99.3 4.4E-12 1.5E-16 125.8 6.9 91 296-419 47-139 (226)
143 3ajd_A Putative methyltransfer 99.3 1.3E-11 4.5E-16 126.6 10.6 117 295-425 81-214 (274)
144 3e8s_A Putative SAM dependent 99.3 5.3E-12 1.8E-16 123.8 7.4 103 295-422 50-152 (227)
145 3a27_A TYW2, uncharacterized p 99.3 1.3E-11 4.3E-16 126.6 10.4 101 295-421 117-218 (272)
146 1yb2_A Hypothetical protein TA 99.3 1.2E-11 4.2E-16 126.5 10.2 108 288-422 101-211 (275)
147 3c0k_A UPF0064 protein YCCW; P 99.2 1.5E-11 5.2E-16 132.8 11.1 116 296-424 219-341 (396)
148 3c3p_A Methyltransferase; NP_9 99.2 1.7E-11 5.8E-16 120.0 10.5 105 296-423 55-161 (210)
149 1o9g_A RRNA methyltransferase; 99.2 1.3E-11 4.5E-16 124.3 9.9 120 288-420 42-212 (250)
150 4dzr_A Protein-(glutamine-N5) 99.2 2.9E-12 9.8E-17 124.6 4.7 117 282-419 14-162 (215)
151 2as0_A Hypothetical protein PH 99.2 1.5E-11 5.1E-16 132.8 10.7 115 297-424 217-337 (396)
152 1ixk_A Methyltransferase; open 99.2 1.6E-11 5.5E-16 128.6 10.6 114 294-425 115-249 (315)
153 1vbf_A 231AA long hypothetical 99.2 4E-11 1.4E-15 118.8 12.9 108 285-422 58-165 (231)
154 1nv8_A HEMK protein; class I a 99.2 1.9E-11 6.5E-16 126.2 10.8 119 282-420 108-247 (284)
155 2gpy_A O-methyltransferase; st 99.2 1.7E-11 6E-16 121.9 10.2 106 296-422 53-160 (233)
156 3htx_A HEN1; HEN1, small RNA m 99.2 3.1E-11 1.1E-15 138.0 13.5 107 296-422 720-834 (950)
157 3v97_A Ribosomal RNA large sub 99.2 2E-11 7E-16 140.9 12.1 113 296-423 538-658 (703)
158 1g8a_A Fibrillarin-like PRE-rR 99.2 5.3E-11 1.8E-15 117.8 13.4 107 293-421 69-177 (227)
159 2yvl_A TRMI protein, hypotheti 99.2 3.6E-11 1.2E-15 120.2 12.1 107 289-421 83-189 (248)
160 3r3h_A O-methyltransferase, SA 99.2 4.5E-12 1.5E-16 127.7 5.2 106 296-422 59-170 (242)
161 1i1n_A Protein-L-isoaspartate 99.2 6.4E-11 2.2E-15 117.0 13.2 103 295-423 75-183 (226)
162 1wy7_A Hypothetical protein PH 99.2 1.9E-10 6.6E-15 111.8 16.1 101 294-419 46-146 (207)
163 2aot_A HMT, histamine N-methyl 99.2 1.3E-11 4.6E-16 127.3 8.0 109 296-421 51-171 (292)
164 1sui_A Caffeoyl-COA O-methyltr 99.2 2E-11 6.9E-16 123.3 9.1 106 296-422 78-190 (247)
165 3id6_C Fibrillarin-like rRNA/T 99.2 1.3E-10 4.3E-15 116.4 14.8 106 294-421 73-180 (232)
166 1i9g_A Hypothetical protein RV 99.2 3.4E-11 1.2E-15 122.9 10.8 110 288-422 90-203 (280)
167 3mq2_A 16S rRNA methyltransfer 99.2 9.4E-12 3.2E-16 122.3 5.9 106 295-420 25-138 (218)
168 2b25_A Hypothetical protein; s 99.2 3.7E-11 1.3E-15 126.6 10.8 108 293-420 101-217 (336)
169 1o54_A SAM-dependent O-methylt 99.2 3.8E-11 1.3E-15 122.9 10.6 109 288-422 103-213 (277)
170 1jg1_A PIMT;, protein-L-isoasp 99.2 5.9E-11 2E-15 118.4 11.4 106 289-422 83-189 (235)
171 2vdv_E TRNA (guanine-N(7)-)-me 99.2 4.3E-11 1.5E-15 120.4 10.3 110 295-420 47-171 (246)
172 4e2x_A TCAB9; kijanose, tetron 99.2 1.7E-11 5.7E-16 133.0 7.7 114 283-421 93-207 (416)
173 2pjd_A Ribosomal RNA small sub 99.2 2.5E-11 8.6E-16 128.5 8.8 115 285-420 184-301 (343)
174 2p41_A Type II methyltransfera 99.2 6.2E-12 2.1E-16 131.1 3.9 141 256-420 27-189 (305)
175 2avd_A Catechol-O-methyltransf 99.2 2.8E-11 9.6E-16 119.7 8.4 106 296-422 68-179 (229)
176 2hnk_A SAM-dependent O-methylt 99.2 4.8E-11 1.6E-15 119.4 10.1 108 296-422 59-181 (239)
177 3c3y_A Pfomt, O-methyltransfer 99.2 4.7E-11 1.6E-15 119.7 10.0 106 296-422 69-181 (237)
178 1mjf_A Spermidine synthase; sp 99.2 2.3E-11 7.9E-16 125.3 7.9 116 296-421 74-192 (281)
179 4dmg_A Putative uncharacterize 99.2 7.3E-11 2.5E-15 127.2 11.7 108 297-424 214-328 (393)
180 3ckk_A TRNA (guanine-N(7)-)-me 99.2 5.6E-11 1.9E-15 119.2 10.1 111 296-422 45-168 (235)
181 3cbg_A O-methyltransferase; cy 99.2 4.1E-11 1.4E-15 119.7 8.9 108 296-422 71-182 (232)
182 2h00_A Methyltransferase 10 do 99.2 7.4E-11 2.5E-15 118.9 10.9 108 297-420 65-190 (254)
183 1wxx_A TT1595, hypothetical pr 99.2 4.6E-11 1.6E-15 128.4 9.7 113 297-424 209-327 (382)
184 3p2e_A 16S rRNA methylase; met 99.2 1.3E-11 4.3E-16 123.1 4.7 107 296-420 23-137 (225)
185 2qe6_A Uncharacterized protein 99.2 1.7E-10 5.7E-15 118.4 13.2 109 297-422 77-196 (274)
186 2pt6_A Spermidine synthase; tr 99.2 3.9E-11 1.3E-15 126.0 8.7 110 297-421 116-229 (321)
187 3hp7_A Hemolysin, putative; st 99.2 3.8E-11 1.3E-15 123.9 8.2 109 286-420 74-183 (291)
188 3cc8_A Putative methyltransfer 99.2 1.1E-10 3.6E-15 114.7 11.1 105 289-421 25-129 (230)
189 1iy9_A Spermidine synthase; ro 99.2 5.4E-11 1.9E-15 122.2 9.3 111 297-422 75-189 (275)
190 3bwc_A Spermidine synthase; SA 99.2 1.1E-10 3.7E-15 121.7 11.6 110 296-421 94-209 (304)
191 2wa2_A Non-structural protein 99.2 6.1E-12 2.1E-16 129.3 1.9 112 287-420 72-191 (276)
192 2yx1_A Hypothetical protein MJ 99.2 6.9E-11 2.4E-15 124.8 10.0 98 296-422 194-291 (336)
193 1inl_A Spermidine synthase; be 99.1 6.5E-11 2.2E-15 122.9 9.4 111 297-422 90-205 (296)
194 2r3s_A Uncharacterized protein 99.1 2.2E-10 7.4E-15 120.1 13.4 106 296-421 164-270 (335)
195 2qm3_A Predicted methyltransfe 99.1 1.9E-10 6.4E-15 123.2 13.1 101 295-418 170-273 (373)
196 4azs_A Methyltransferase WBDD; 99.1 5.3E-11 1.8E-15 134.5 8.8 106 296-419 65-170 (569)
197 1xj5_A Spermidine synthase 1; 99.1 7.2E-11 2.5E-15 124.6 9.3 112 296-421 119-234 (334)
198 1r18_A Protein-L-isoaspartate( 99.1 1.4E-10 4.6E-15 115.0 10.3 100 295-422 82-194 (227)
199 3gjy_A Spermidine synthase; AP 99.1 9.5E-11 3.3E-15 122.3 9.5 107 299-421 91-199 (317)
200 3tm4_A TRNA (guanine N2-)-meth 99.1 1.6E-10 5.6E-15 123.7 11.6 107 295-419 215-327 (373)
201 2oxt_A Nucleoside-2'-O-methylt 99.1 7.5E-12 2.6E-16 127.9 0.7 110 289-420 66-183 (265)
202 3m6w_A RRNA methylase; rRNA me 99.1 8E-11 2.7E-15 129.1 8.9 114 295-426 99-233 (464)
203 2o07_A Spermidine synthase; st 99.1 8.9E-11 3E-15 122.3 8.8 112 296-422 94-209 (304)
204 3dp7_A SAM-dependent methyltra 99.1 3.7E-10 1.3E-14 120.3 13.7 106 296-421 178-286 (363)
205 2pbf_A Protein-L-isoaspartate 99.1 2.1E-10 7.3E-15 113.3 10.9 107 294-422 77-193 (227)
206 1qzz_A RDMB, aclacinomycin-10- 99.1 5.8E-10 2E-14 118.8 15.0 114 288-422 173-287 (374)
207 1zq9_A Probable dimethyladenos 99.1 2.5E-10 8.7E-15 117.7 11.8 87 285-391 16-102 (285)
208 1p91_A Ribosomal RNA large sub 99.1 1.3E-10 4.5E-15 117.9 9.5 93 296-421 84-177 (269)
209 2b2c_A Spermidine synthase; be 99.1 6.5E-11 2.2E-15 123.9 7.3 111 297-422 108-222 (314)
210 3q87_B N6 adenine specific DNA 99.1 1.3E-10 4.6E-15 110.2 8.8 93 296-420 22-121 (170)
211 2i7c_A Spermidine synthase; tr 99.1 2.1E-10 7.3E-15 118.2 10.8 113 296-421 77-191 (283)
212 1uir_A Polyamine aminopropyltr 99.1 1.6E-10 5.4E-15 121.0 9.7 112 296-422 76-195 (314)
213 1af7_A Chemotaxis receptor met 99.1 4E-10 1.4E-14 115.6 12.5 119 297-421 105-251 (274)
214 3adn_A Spermidine synthase; am 99.1 1.3E-10 4.4E-15 120.5 8.7 114 296-422 82-198 (294)
215 1x19_A CRTF-related protein; m 99.1 8.4E-10 2.9E-14 117.2 15.1 113 288-421 181-294 (359)
216 3gwz_A MMCR; methyltransferase 99.1 1.2E-09 4E-14 116.7 16.2 114 287-421 192-306 (369)
217 1vlm_A SAM-dependent methyltra 99.1 2.6E-10 8.8E-15 112.3 10.2 91 298-421 48-138 (219)
218 3i53_A O-methyltransferase; CO 99.1 6.4E-10 2.2E-14 116.8 13.8 108 294-422 166-274 (332)
219 3m4x_A NOL1/NOP2/SUN family pr 99.1 1.9E-10 6.5E-15 125.9 9.9 116 294-426 102-238 (456)
220 3mcz_A O-methyltransferase; ad 99.1 5E-10 1.7E-14 118.4 12.9 116 288-421 169-286 (352)
221 2bm8_A Cephalosporin hydroxyla 99.1 5.8E-11 2E-15 119.1 5.2 98 297-422 81-187 (236)
222 2frx_A Hypothetical protein YE 99.1 2.8E-10 9.7E-15 125.6 10.5 113 297-426 117-250 (479)
223 3opn_A Putative hemolysin; str 99.1 5.1E-11 1.7E-15 119.4 4.0 109 286-420 26-135 (232)
224 2ip2_A Probable phenazine-spec 99.0 6.8E-10 2.3E-14 116.5 11.9 112 289-422 160-272 (334)
225 1tw3_A COMT, carminomycin 4-O- 99.0 1.1E-09 3.8E-14 116.1 13.6 112 289-421 175-287 (360)
226 1ne2_A Hypothetical protein TA 99.0 8.7E-10 3E-14 106.8 11.4 91 295-412 49-139 (200)
227 2h1r_A Dimethyladenosine trans 99.0 6.6E-10 2.2E-14 115.4 10.8 83 288-391 33-115 (299)
228 2yxl_A PH0851 protein, 450AA l 99.0 1E-09 3.4E-14 120.5 12.7 116 294-425 256-392 (450)
229 2jjq_A Uncharacterized RNA met 99.0 1.3E-09 4.4E-14 118.7 13.2 100 295-422 288-387 (425)
230 1uwv_A 23S rRNA (uracil-5-)-me 99.0 1.3E-09 4.6E-14 118.9 13.1 118 282-421 271-388 (433)
231 3dou_A Ribosomal RNA large sub 99.0 5.3E-10 1.8E-14 108.4 8.4 99 295-419 23-136 (191)
232 3ldu_A Putative methylase; str 99.0 1.3E-09 4.6E-14 117.1 11.8 119 283-419 181-341 (385)
233 3frh_A 16S rRNA methylase; met 99.0 1.6E-09 5.4E-14 108.1 11.2 108 285-419 96-203 (253)
234 2nyu_A Putative ribosomal RNA 99.0 1.2E-09 4.1E-14 105.0 9.8 102 295-421 20-144 (196)
235 3ldg_A Putative uncharacterize 99.0 3.2E-09 1.1E-13 114.0 13.5 119 283-419 180-340 (384)
236 3sso_A Methyltransferase; macr 99.0 1.4E-09 4.9E-14 116.1 10.2 107 283-422 204-324 (419)
237 2qfm_A Spermine synthase; sper 99.0 1.8E-09 6.2E-14 114.1 10.8 131 285-424 175-316 (364)
238 3k0b_A Predicted N6-adenine-sp 99.0 2.1E-09 7.2E-14 115.8 11.5 118 284-419 188-347 (393)
239 1ej0_A FTSJ; methyltransferase 99.0 2.7E-09 9.3E-14 99.6 10.9 102 294-420 19-134 (180)
240 3axs_A Probable N(2),N(2)-dime 98.9 1E-09 3.5E-14 117.9 8.7 104 296-422 51-158 (392)
241 1sqg_A SUN protein, FMU protei 98.9 1.6E-09 5.6E-14 118.1 10.3 116 294-426 243-378 (429)
242 3lcv_B Sisomicin-gentamicin re 98.9 9.4E-10 3.2E-14 110.7 7.6 114 282-419 119-233 (281)
243 3bt7_A TRNA (uracil-5-)-methyl 98.9 2.6E-09 8.8E-14 114.2 11.3 101 298-424 214-328 (369)
244 1qam_A ERMC' methyltransferase 98.9 7.2E-09 2.5E-13 104.3 13.7 84 285-390 18-102 (244)
245 2plw_A Ribosomal RNA methyltra 98.9 2.5E-09 8.5E-14 103.3 9.7 101 295-420 20-152 (201)
246 3gru_A Dimethyladenosine trans 98.9 2.4E-09 8.3E-14 110.8 10.1 85 285-390 38-122 (295)
247 2dul_A N(2),N(2)-dimethylguano 98.9 2.2E-09 7.7E-14 115.0 9.8 101 297-421 47-163 (378)
248 2b9e_A NOL1/NOP2/SUN domain fa 98.9 6.7E-09 2.3E-13 108.3 13.1 116 294-426 99-238 (309)
249 3giw_A Protein of unknown func 98.9 3.4E-09 1.2E-13 108.2 10.6 110 299-422 80-200 (277)
250 3lst_A CALO1 methyltransferase 98.9 6.7E-09 2.3E-13 109.8 11.5 111 288-422 175-286 (348)
251 2cmg_A Spermidine synthase; tr 98.9 1.6E-09 5.6E-14 110.3 6.2 98 296-421 71-170 (262)
252 2zfu_A Nucleomethylin, cerebra 98.8 2.1E-09 7.2E-14 105.1 5.7 85 296-421 66-150 (215)
253 1yub_A Ermam, rRNA methyltrans 98.8 3.8E-10 1.3E-14 113.6 -0.8 108 289-420 21-143 (245)
254 3tqs_A Ribosomal RNA small sub 98.8 9.2E-09 3.1E-13 104.4 9.1 86 287-390 19-104 (255)
255 3fut_A Dimethyladenosine trans 98.8 1.5E-08 5.2E-13 103.6 10.7 95 287-406 37-132 (271)
256 1fp1_D Isoliquiritigenin 2'-O- 98.8 1.1E-08 3.7E-13 109.2 10.0 107 287-422 198-306 (372)
257 3reo_A (ISO)eugenol O-methyltr 98.8 2.2E-08 7.6E-13 106.8 12.0 107 287-422 192-300 (368)
258 2r6z_A UPF0341 protein in RSP 98.8 1.9E-09 6.5E-14 109.6 3.4 81 295-391 81-170 (258)
259 2f8l_A Hypothetical protein LM 98.8 1.4E-08 4.9E-13 107.2 9.9 104 296-420 129-254 (344)
260 3p9c_A Caffeic acid O-methyltr 98.7 3.4E-08 1.2E-12 105.2 11.5 99 295-422 199-298 (364)
261 4a6d_A Hydroxyindole O-methylt 98.7 8.8E-08 3E-12 101.6 14.2 113 287-421 169-282 (353)
262 2xyq_A Putative 2'-O-methyl tr 98.7 2.3E-08 7.7E-13 103.3 8.5 108 281-421 46-170 (290)
263 2ld4_A Anamorsin; methyltransf 98.7 6.1E-09 2.1E-13 98.7 3.9 89 294-421 9-100 (176)
264 2ih2_A Modification methylase 98.7 3.4E-08 1.1E-12 106.7 9.3 97 295-420 37-162 (421)
265 2okc_A Type I restriction enzy 98.7 2.4E-08 8.2E-13 109.3 8.1 113 288-419 162-304 (445)
266 1fp2_A Isoflavone O-methyltran 98.7 4.9E-08 1.7E-12 103.3 9.5 99 295-422 186-288 (352)
267 3ll7_A Putative methyltransfer 98.6 2.4E-08 8.2E-13 107.6 6.9 78 297-391 93-172 (410)
268 3v97_A Ribosomal RNA large sub 98.6 1.3E-07 4.3E-12 109.3 12.5 122 284-420 177-345 (703)
269 3uzu_A Ribosomal RNA small sub 98.6 1E-07 3.6E-12 97.8 9.2 82 287-390 32-122 (279)
270 3ftd_A Dimethyladenosine trans 98.5 9.7E-08 3.3E-12 96.5 7.6 83 285-390 19-103 (249)
271 3cvo_A Methyltransferase-like 98.5 6.4E-07 2.2E-11 87.4 12.9 102 297-421 30-153 (202)
272 1m6y_A S-adenosyl-methyltransf 98.5 1.4E-07 4.7E-12 98.0 8.5 82 294-390 23-106 (301)
273 1qyr_A KSGA, high level kasuga 98.5 6.7E-08 2.3E-12 97.8 5.4 80 288-390 12-98 (252)
274 1zg3_A Isoflavanone 4'-O-methy 98.5 2.1E-07 7.3E-12 98.6 8.9 98 296-422 192-293 (358)
275 2oyr_A UPF0341 protein YHIQ; a 98.5 9E-08 3.1E-12 97.1 5.2 86 289-391 78-173 (258)
276 2ar0_A M.ecoki, type I restric 98.4 5.2E-07 1.8E-11 101.1 8.4 110 294-419 166-309 (541)
277 3o4f_A Spermidine synthase; am 98.3 8.3E-07 2.8E-11 91.3 8.8 115 296-422 82-198 (294)
278 3c6k_A Spermine synthase; sper 98.2 2.7E-06 9.1E-11 90.3 8.8 119 297-421 205-330 (381)
279 3evf_A RNA-directed RNA polyme 98.2 1.4E-06 4.8E-11 88.1 5.7 108 293-420 70-182 (277)
280 3khk_A Type I restriction-modi 98.2 2.1E-06 7.3E-11 96.1 7.4 104 300-419 247-392 (544)
281 4fzv_A Putative methyltransfer 98.1 5.7E-06 2E-10 87.7 9.9 122 294-426 145-288 (359)
282 3lkd_A Type I restriction-modi 98.1 1.4E-05 4.8E-10 89.3 12.9 109 295-419 219-355 (542)
283 2qy6_A UPF0209 protein YFCK; s 98.1 4.4E-06 1.5E-10 84.7 6.9 119 296-419 59-210 (257)
284 3gcz_A Polyprotein; flavivirus 98.0 2E-06 6.8E-11 87.2 3.9 107 294-420 87-199 (282)
285 2wk1_A NOVP; transferase, O-me 98.0 1.7E-05 5.7E-10 81.4 10.2 107 296-422 105-244 (282)
286 4auk_A Ribosomal RNA large sub 98.0 9.3E-06 3.2E-10 85.8 8.2 88 295-415 209-296 (375)
287 3p8z_A Mtase, non-structural p 98.0 6.6E-06 2.3E-10 80.9 6.4 104 294-419 75-183 (267)
288 3s1s_A Restriction endonucleas 97.9 1.9E-05 6.5E-10 90.7 9.7 111 295-419 319-462 (878)
289 3lkz_A Non-structural protein 97.8 4.4E-05 1.5E-09 77.5 8.2 106 293-419 90-201 (321)
290 3eld_A Methyltransferase; flav 97.7 1.5E-05 5.2E-10 81.2 4.2 106 295-420 79-189 (300)
291 1wg8_A Predicted S-adenosylmet 97.7 5.3E-05 1.8E-09 77.1 8.1 78 294-390 19-97 (285)
292 3b5i_A S-adenosyl-L-methionine 97.6 0.00046 1.6E-08 73.5 13.0 120 298-421 53-224 (374)
293 2px2_A Genome polyprotein [con 97.5 6.5E-05 2.2E-09 75.0 5.2 104 294-419 70-180 (269)
294 2k4m_A TR8_protein, UPF0146 pr 97.5 0.00011 3.8E-09 67.3 6.3 69 284-388 24-95 (153)
295 2zig_A TTHA0409, putative modi 97.5 0.00021 7.2E-09 73.6 8.1 47 296-343 234-280 (297)
296 3ufb_A Type I restriction-modi 97.3 0.00063 2.2E-08 75.8 10.7 91 287-391 207-311 (530)
297 2efj_A 3,7-dimethylxanthine me 97.3 0.00066 2.3E-08 72.4 9.2 107 298-421 53-224 (384)
298 1m6e_X S-adenosyl-L-methionnin 97.1 0.00038 1.3E-08 73.6 5.2 108 297-421 51-208 (359)
299 3r24_A NSP16, 2'-O-methyl tran 97.0 0.0018 6.2E-08 65.7 9.0 105 281-419 92-214 (344)
300 1g60_A Adenine-specific methyl 96.9 0.0013 4.4E-08 66.3 7.2 49 296-345 211-259 (260)
301 2oo3_A Protein involved in cat 96.9 0.00056 1.9E-08 69.6 3.9 112 284-419 82-195 (283)
302 1i4w_A Mitochondrial replicati 96.8 0.0015 5.2E-08 68.8 7.0 82 275-373 34-118 (353)
303 1f8f_A Benzyl alcohol dehydrog 96.6 0.0087 3E-07 63.2 11.4 103 289-420 182-287 (371)
304 3tka_A Ribosomal RNA small sub 96.4 0.005 1.7E-07 64.1 7.5 82 291-390 51-136 (347)
305 3uko_A Alcohol dehydrogenase c 96.2 0.013 4.4E-07 62.0 9.2 103 289-420 185-293 (378)
306 3m6i_A L-arabinitol 4-dehydrog 96.1 0.012 4E-07 61.9 8.7 100 294-420 176-281 (363)
307 3g7u_A Cytosine-specific methy 96.1 0.0083 2.8E-07 63.8 7.6 73 299-390 3-79 (376)
308 1g55_A DNA cytosine methyltran 96.1 0.0036 1.2E-07 65.8 4.2 72 299-390 3-76 (343)
309 3ip1_A Alcohol dehydrogenase, 96.0 0.0078 2.7E-07 64.4 6.7 46 294-339 210-257 (404)
310 1pl8_A Human sorbitol dehydrog 96.0 0.014 4.8E-07 61.2 8.6 98 294-420 168-271 (356)
311 4ej6_A Putative zinc-binding d 96.0 0.017 5.7E-07 61.1 9.0 98 294-420 179-282 (370)
312 1rjd_A PPM1P, carboxy methyl t 95.9 0.026 9E-07 59.0 10.1 137 280-419 80-229 (334)
313 3fpc_A NADP-dependent alcohol 95.9 0.0028 9.6E-08 66.5 2.7 99 293-420 162-264 (352)
314 1p0f_A NADP-dependent alcohol 95.8 0.03 1E-06 59.0 10.2 101 291-420 185-291 (373)
315 2py6_A Methyltransferase FKBM; 95.7 0.022 7.4E-07 61.3 8.6 64 295-371 224-293 (409)
316 2dph_A Formaldehyde dismutase; 95.7 0.021 7.3E-07 60.8 8.5 45 293-337 181-227 (398)
317 2fzw_A Alcohol dehydrogenase c 95.7 0.045 1.5E-06 57.6 10.7 101 291-420 184-290 (373)
318 1e3i_A Alcohol dehydrogenase, 95.7 0.036 1.2E-06 58.5 10.0 101 291-420 189-295 (376)
319 3uk3_C Zinc finger protein 217 95.7 0.01 3.6E-07 44.0 4.2 52 45-123 3-54 (57)
320 3s2e_A Zinc-containing alcohol 95.6 0.029 9.8E-07 58.3 8.8 99 292-420 161-261 (340)
321 2c7p_A Modification methylase 95.6 0.03 1E-06 58.4 8.8 71 296-390 9-79 (327)
322 1cdo_A Alcohol dehydrogenase; 95.6 0.044 1.5E-06 57.8 10.2 101 291-420 186-292 (374)
323 3two_A Mannitol dehydrogenase; 95.5 0.019 6.7E-07 59.9 7.0 89 294-420 173-263 (348)
324 4dvj_A Putative zinc-dependent 95.4 0.042 1.4E-06 57.8 9.5 94 297-420 171-268 (363)
325 1kol_A Formaldehyde dehydrogen 95.4 0.027 9.3E-07 59.9 7.9 46 293-338 181-228 (398)
326 2jhf_A Alcohol dehydrogenase E 95.4 0.053 1.8E-06 57.1 10.1 101 291-420 185-291 (374)
327 1vj0_A Alcohol dehydrogenase, 95.3 0.041 1.4E-06 58.2 8.9 99 293-420 190-296 (380)
328 3jv7_A ADH-A; dehydrogenase, n 95.2 0.035 1.2E-06 57.8 8.0 97 294-420 168-268 (345)
329 1bbo_A Human enhancer-binding 95.2 0.025 8.4E-07 41.9 4.8 51 46-123 1-51 (57)
330 2ct1_A Transcriptional repress 95.1 0.019 6.4E-07 45.7 4.3 57 44-125 13-69 (77)
331 2yt9_A Zinc finger-containing 95.1 0.018 6.1E-07 47.5 4.3 82 44-126 5-90 (95)
332 1x6e_A Zinc finger protein 24; 95.1 0.022 7.5E-07 44.7 4.5 53 44-123 12-64 (72)
333 3uog_A Alcohol dehydrogenase; 94.9 0.048 1.6E-06 57.3 8.1 102 288-420 180-285 (363)
334 2drp_A Protein (tramtrack DNA- 94.9 0.019 6.5E-07 44.0 3.7 55 45-124 9-63 (66)
335 1x5w_A Zinc finger protein 64, 94.9 0.026 9E-07 43.9 4.5 54 44-124 7-60 (70)
336 3fbg_A Putative arginate lyase 94.9 0.073 2.5E-06 55.5 9.1 92 297-419 150-245 (346)
337 2dmd_A Zinc finger protein 64, 94.9 0.024 8.2E-07 46.8 4.4 79 44-123 6-86 (96)
338 2lce_A B-cell lymphoma 6 prote 94.8 0.036 1.2E-06 43.6 5.1 53 44-123 15-67 (74)
339 1uuf_A YAHK, zinc-type alcohol 94.8 0.046 1.6E-06 57.7 7.4 94 294-420 191-286 (369)
340 3goh_A Alcohol dehydrogenase, 94.7 0.049 1.7E-06 55.9 7.2 91 291-421 136-228 (315)
341 2d8a_A PH0655, probable L-thre 94.6 0.023 7.9E-07 59.3 4.5 99 292-420 163-265 (348)
342 2adr_A ADR1; transcription reg 94.6 0.039 1.3E-06 41.3 4.6 52 46-124 2-53 (60)
343 2uyo_A Hypothetical protein ML 94.5 0.2 7E-06 51.6 11.3 129 279-422 85-218 (310)
344 2kmk_A Zinc finger protein GFI 94.5 0.017 5.7E-07 46.1 2.5 75 47-122 2-78 (82)
345 2ee8_A Protein ODD-skipped-rel 94.4 0.05 1.7E-06 45.8 5.5 79 44-123 15-95 (106)
346 1e3j_A NADP(H)-dependent ketos 94.4 0.081 2.8E-06 55.2 8.2 97 294-420 165-269 (352)
347 2d9h_A Zinc finger protein 692 94.4 0.032 1.1E-06 44.3 3.9 57 45-125 6-62 (78)
348 2qrv_A DNA (cytosine-5)-methyl 94.3 0.092 3.2E-06 53.8 8.1 74 296-389 14-90 (295)
349 2dq4_A L-threonine 3-dehydroge 94.2 0.013 4.5E-07 61.1 1.5 98 292-420 160-260 (343)
350 2cot_A Zinc finger protein 435 94.2 0.051 1.7E-06 43.1 4.7 52 44-122 16-67 (77)
351 2b5w_A Glucose dehydrogenase; 94.0 0.094 3.2E-06 54.8 7.7 91 299-420 174-271 (357)
352 1a1h_A QGSR zinc finger peptid 93.9 0.043 1.5E-06 44.5 3.8 77 45-122 3-83 (90)
353 2dmi_A Teashirt homolog 3; zin 93.9 0.056 1.9E-06 46.3 4.7 80 44-124 17-103 (115)
354 3gms_A Putative NADPH:quinone 93.8 0.027 9.2E-07 58.6 3.0 49 289-338 136-187 (340)
355 4h0n_A DNMT2; SAH binding, tra 93.8 0.053 1.8E-06 56.6 5.2 71 299-389 4-76 (333)
356 1pqw_A Polyketide synthase; ro 93.7 0.077 2.6E-06 50.3 5.9 101 289-420 30-135 (198)
357 3jyn_A Quinone oxidoreductase; 93.7 0.039 1.3E-06 57.0 3.9 101 289-420 132-237 (325)
358 4a2c_A Galactitol-1-phosphate 93.7 0.11 3.9E-06 53.7 7.5 98 294-420 157-258 (346)
359 3tqh_A Quinone oxidoreductase; 93.7 0.19 6.6E-06 51.6 9.2 93 291-419 146-242 (321)
360 3fwz_A Inner membrane protein 93.6 0.31 1.1E-05 43.5 9.5 94 298-419 7-102 (140)
361 3qwb_A Probable quinone oxidor 93.6 0.16 5.6E-06 52.4 8.5 101 289-420 140-245 (334)
362 3ubt_Y Modification methylase 93.6 0.13 4.3E-06 53.1 7.6 68 299-389 1-68 (331)
363 1piw_A Hypothetical zinc-type 93.5 0.14 4.8E-06 53.6 8.0 97 293-420 175-274 (360)
364 3qv2_A 5-cytosine DNA methyltr 93.5 0.071 2.4E-06 55.5 5.6 72 298-390 10-84 (327)
365 1rjw_A ADH-HT, alcohol dehydro 93.5 0.13 4.3E-06 53.5 7.5 96 294-420 161-259 (339)
366 4b7c_A Probable oxidoreductase 93.5 0.13 4.3E-06 53.2 7.5 103 288-420 140-246 (336)
367 2gqj_A Zinc finger protein KIA 93.5 0.044 1.5E-06 46.0 3.2 54 45-124 23-77 (98)
368 2ebt_A Krueppel-like factor 5; 93.4 0.072 2.5E-06 44.1 4.5 79 44-122 13-96 (100)
369 3vyw_A MNMC2; tRNA wobble urid 93.4 0.26 8.9E-06 50.6 9.5 110 298-419 97-223 (308)
370 2h6e_A ADH-4, D-arabinose 1-de 93.3 0.12 4.1E-06 53.7 7.0 95 294-420 168-267 (344)
371 2csh_A Zinc finger protein 297 93.3 0.051 1.7E-06 46.1 3.5 78 44-123 8-87 (110)
372 2dlq_A GLI-kruppel family memb 93.3 0.088 3E-06 45.3 5.0 27 45-71 6-32 (124)
373 1x6h_A Transcriptional repress 93.3 0.08 2.7E-06 42.5 4.4 57 45-124 14-70 (86)
374 4eye_A Probable oxidoreductase 93.2 0.17 6E-06 52.5 8.0 101 288-420 150-255 (342)
375 2rpc_A Zinc finger protein ZIC 93.2 0.097 3.3E-06 47.3 5.3 80 43-122 22-113 (155)
376 1v3u_A Leukotriene B4 12- hydr 93.2 0.13 4.5E-06 53.1 7.0 101 289-420 137-242 (333)
377 2wbs_A Krueppel-like factor 4; 92.9 0.059 2E-06 43.6 3.2 78 45-122 4-86 (89)
378 4gzn_C ZFP-57, zinc finger pro 92.9 0.062 2.1E-06 41.3 2.9 51 45-122 3-53 (60)
379 2dlq_A GLI-kruppel family memb 92.7 0.11 3.8E-06 44.7 4.7 80 45-124 34-117 (124)
380 3krt_A Crotonyl COA reductase; 92.5 0.26 9E-06 53.3 8.6 45 293-338 224-271 (456)
381 1f2i_G Fusion of N-terminal 17 92.5 0.091 3.1E-06 41.0 3.6 52 44-122 17-70 (73)
382 2lv2_A Insulinoma-associated p 92.3 0.13 4.4E-06 42.5 4.4 53 45-124 27-79 (85)
383 3nx4_A Putative oxidoreductase 92.1 0.52 1.8E-05 48.2 9.7 89 298-420 148-239 (324)
384 2c0c_A Zinc binding alcohol de 92.0 0.18 6.1E-06 52.9 6.2 96 293-419 159-258 (362)
385 1boo_A Protein (N-4 cytosine-s 92.0 0.15 5.1E-06 52.8 5.5 50 295-345 250-299 (323)
386 1llm_C Chimera of ZIF23-GCN4; 92.0 0.12 4.1E-06 42.0 3.8 27 45-71 2-28 (88)
387 4eez_A Alcohol dehydrogenase 1 91.8 0.11 3.9E-06 53.7 4.5 100 294-421 160-262 (348)
388 4dup_A Quinone oxidoreductase; 91.8 0.33 1.1E-05 50.5 8.0 101 289-420 159-263 (353)
389 2j3h_A NADP-dependent oxidored 91.7 0.2 6.7E-06 51.9 6.0 102 289-420 147-253 (345)
390 2eih_A Alcohol dehydrogenase; 91.6 0.34 1.2E-05 50.2 7.8 45 293-338 162-209 (343)
391 2cf5_A Atccad5, CAD, cinnamyl 91.6 0.086 3E-06 55.2 3.2 94 294-420 176-273 (357)
392 3gaz_A Alcohol dehydrogenase s 91.6 0.61 2.1E-05 48.3 9.7 98 289-420 142-244 (343)
393 1jvb_A NAD(H)-dependent alcoho 91.5 0.69 2.3E-05 47.9 10.0 98 293-420 166-269 (347)
394 1gu7_A Enoyl-[acyl-carrier-pro 91.3 0.22 7.6E-06 52.0 6.0 42 288-330 157-202 (364)
395 2hcy_A Alcohol dehydrogenase 1 91.3 0.23 7.9E-06 51.6 6.1 97 294-420 166-267 (347)
396 3oig_A Enoyl-[acyl-carrier-pro 91.3 1.1 3.6E-05 44.3 10.7 79 296-389 5-94 (266)
397 2ej4_A Zinc finger protein ZIC 91.3 0.36 1.2E-05 39.4 6.1 61 45-123 24-84 (95)
398 3tos_A CALS11; methyltransfera 91.2 1 3.6E-05 45.0 10.5 112 298-422 70-217 (257)
399 1yb5_A Quinone oxidoreductase; 91.2 0.39 1.3E-05 50.1 7.7 102 288-420 161-267 (351)
400 2lt7_A Transcriptional regulat 91.2 0.079 2.7E-06 47.5 2.0 80 45-125 21-102 (133)
401 1iz0_A Quinone oxidoreductase; 91.1 0.18 6.2E-06 51.3 4.9 90 295-420 123-216 (302)
402 3pxx_A Carveol dehydrogenase; 91.1 1.5 5.2E-05 43.6 11.8 109 295-420 7-151 (287)
403 1wjp_A Zinc finger protein 295 91.1 0.18 6.3E-06 42.5 4.2 76 45-124 15-92 (107)
404 2vn8_A Reticulon-4-interacting 90.8 0.26 9E-06 51.8 6.0 95 295-420 181-278 (375)
405 2dlk_A Novel protein; ZF-C2H2 90.8 0.24 8.3E-06 38.9 4.4 53 45-123 6-62 (79)
406 2jp9_A Wilms tumor 1; DNA bind 90.7 0.21 7.2E-06 42.6 4.3 79 45-123 5-88 (119)
407 1a1h_A QGSR zinc finger peptid 90.5 0.19 6.5E-06 40.5 3.7 22 102-123 35-56 (90)
408 1qor_A Quinone oxidoreductase; 90.4 0.53 1.8E-05 48.2 7.8 101 289-420 132-237 (327)
409 3pvc_A TRNA 5-methylaminomethy 90.4 0.36 1.2E-05 55.2 7.0 125 297-423 58-212 (689)
410 1zsy_A Mitochondrial 2-enoyl t 90.3 0.68 2.3E-05 48.2 8.6 43 288-330 158-203 (357)
411 1eg2_A Modification methylase 90.3 0.25 8.7E-06 51.1 5.2 49 295-344 240-291 (319)
412 1yqd_A Sinapyl alcohol dehydro 90.3 0.23 8E-06 52.0 5.0 43 294-337 183-228 (366)
413 3llv_A Exopolyphosphatase-rela 90.1 1.2 4E-05 39.4 8.9 69 298-388 6-76 (141)
414 2elu_A Zinc finger protein 406 90.1 0.12 4.2E-06 34.0 1.6 27 46-72 9-35 (37)
415 3c85_A Putative glutathione-re 90.0 1.3 4.5E-05 41.1 9.5 71 296-388 37-111 (183)
416 3me5_A Cytosine-specific methy 89.7 0.34 1.2E-05 53.0 5.9 60 298-373 88-147 (482)
417 2zb4_A Prostaglandin reductase 89.7 0.46 1.6E-05 49.4 6.7 99 293-420 154-258 (357)
418 3l9w_A Glutathione-regulated p 89.7 0.75 2.6E-05 49.3 8.4 94 298-419 4-99 (413)
419 4a0s_A Octenoyl-COA reductase/ 89.6 1.1 3.6E-05 48.3 9.7 45 293-338 216-263 (447)
420 2ctd_A Zinc finger protein 512 89.6 0.41 1.4E-05 40.0 5.1 50 45-122 33-84 (96)
421 3gqv_A Enoyl reductase; medium 89.5 1 3.4E-05 47.2 9.2 94 296-420 163-261 (371)
422 4fn4_A Short chain dehydrogena 89.5 1 3.6E-05 44.8 8.8 79 296-390 5-92 (254)
423 1llm_C Chimera of ZIF23-GCN4; 89.5 0.059 2E-06 43.9 -0.4 56 45-128 30-85 (88)
424 1id1_A Putative potassium chan 89.3 1.5 5E-05 39.5 9.0 97 298-419 3-102 (153)
425 3ggo_A Prephenate dehydrogenas 89.0 1.8 6.2E-05 44.4 10.4 89 298-419 33-125 (314)
426 1pjc_A Protein (L-alanine dehy 89.0 0.32 1.1E-05 51.1 4.8 44 296-340 165-210 (361)
427 3ijr_A Oxidoreductase, short c 88.8 2.2 7.4E-05 42.9 10.8 109 295-419 44-179 (291)
428 3grk_A Enoyl-(acyl-carrier-pro 88.7 2.5 8.5E-05 42.6 11.2 78 295-389 28-116 (293)
429 1wly_A CAAR, 2-haloacrylate re 88.6 0.2 7E-06 51.6 2.9 101 289-420 137-242 (333)
430 2cdc_A Glucose dehydrogenase g 88.4 0.8 2.7E-05 47.8 7.5 90 298-420 181-276 (366)
431 2j8z_A Quinone oxidoreductase; 88.1 1.2 4.1E-05 46.3 8.6 47 291-338 156-205 (354)
432 2i13_A AART; DNA binding, zinc 88.1 0.27 9.1E-06 46.0 3.2 77 45-122 76-154 (190)
433 1lss_A TRK system potassium up 88.1 3.9 0.00013 35.3 10.8 71 298-389 4-76 (140)
434 3k31_A Enoyl-(acyl-carrier-pro 88.0 2.2 7.4E-05 43.1 10.2 77 296-389 28-115 (296)
435 4dcm_A Ribosomal RNA large sub 88.0 2.5 8.5E-05 44.5 11.0 96 297-419 38-133 (375)
436 2ghf_A ZHX1, zinc fingers and 88.0 0.3 1E-05 41.7 3.1 55 44-121 16-70 (102)
437 2wbt_A B-129; zinc finger; 2.7 87.9 0.44 1.5E-05 41.5 4.3 51 45-124 73-123 (129)
438 1tt7_A YHFP; alcohol dehydroge 87.8 0.68 2.3E-05 47.5 6.3 96 294-420 146-245 (330)
439 2zig_A TTHA0409, putative modi 87.8 0.5 1.7E-05 48.1 5.2 63 360-425 20-100 (297)
440 2eps_A POZ-, at HOOK-, and zin 87.8 0.41 1.4E-05 35.0 3.4 28 44-71 10-37 (54)
441 2vz8_A Fatty acid synthase; tr 87.6 0.17 5.7E-06 66.1 1.9 115 284-422 1228-1348(2512)
442 2j7j_A Transcription factor II 87.5 0.28 9.5E-06 38.9 2.5 74 47-122 2-82 (85)
443 3ce6_A Adenosylhomocysteinase; 87.4 1.8 6E-05 47.5 9.6 42 295-337 271-314 (494)
444 2g1u_A Hypothetical protein TM 87.4 1.1 3.9E-05 40.4 6.9 38 295-333 16-55 (155)
445 2vhw_A Alanine dehydrogenase; 87.4 0.4 1.4E-05 50.7 4.4 42 296-338 166-209 (377)
446 4da9_A Short-chain dehydrogena 87.2 2.2 7.6E-05 42.6 9.6 80 295-390 26-115 (280)
447 3ps9_A TRNA 5-methylaminomethy 86.6 1 3.6E-05 51.1 7.5 123 297-422 66-219 (676)
448 2eez_A Alanine dehydrogenase; 86.5 0.74 2.5E-05 48.4 5.8 99 296-420 164-264 (369)
449 2ae2_A Protein (tropinone redu 86.4 1.7 6E-05 42.6 8.2 78 296-389 7-94 (260)
450 1ae1_A Tropinone reductase-I; 86.3 1.8 6E-05 43.0 8.3 79 296-390 19-107 (273)
451 2i13_A AART; DNA binding, zinc 86.3 0.4 1.4E-05 44.8 3.3 78 45-123 48-127 (190)
452 3jyo_A Quinate/shikimate dehyd 86.2 1.1 3.7E-05 45.4 6.7 56 284-340 113-171 (283)
453 1ubd_C Protein (YY1 zinc finge 86.1 0.35 1.2E-05 41.6 2.5 19 104-122 65-85 (124)
454 2gli_A Protein (five-finger GL 85.9 0.84 2.9E-05 40.8 5.1 79 45-123 2-91 (155)
455 1xa0_A Putative NADPH dependen 85.7 0.82 2.8E-05 46.8 5.6 94 294-420 145-244 (328)
456 3n58_A Adenosylhomocysteinase; 85.6 3.5 0.00012 44.4 10.4 38 295-333 244-283 (464)
457 2eod_A TNF receptor-associated 85.5 0.3 1E-05 37.3 1.6 50 44-122 8-58 (66)
458 4hp8_A 2-deoxy-D-gluconate 3-d 85.4 2.6 9.1E-05 41.7 8.9 77 295-389 6-86 (247)
459 2epa_A Krueppel-like factor 10 85.3 0.67 2.3E-05 35.7 3.7 52 44-122 15-70 (72)
460 4a27_A Synaptic vesicle membra 85.2 0.87 3E-05 47.2 5.5 99 289-420 134-236 (349)
461 3ucx_A Short chain dehydrogena 85.2 3.5 0.00012 40.6 9.8 80 295-390 8-96 (264)
462 4g81_D Putative hexonate dehyd 85.2 1.2 4.2E-05 44.4 6.3 78 296-389 7-93 (255)
463 2jp9_A Wilms tumor 1; DNA bind 85.1 0.47 1.6E-05 40.3 2.9 77 45-122 35-117 (119)
464 1f0y_A HCDH, L-3-hydroxyacyl-C 85.0 3.9 0.00013 41.3 10.2 108 299-419 16-133 (302)
465 3o38_A Short chain dehydrogena 84.9 2.7 9.3E-05 41.2 8.8 79 296-389 20-108 (266)
466 3qiv_A Short-chain dehydrogena 84.6 3.2 0.00011 40.3 9.1 79 296-390 7-94 (253)
467 3tsc_A Putative oxidoreductase 84.6 2 6.9E-05 42.7 7.7 79 295-389 8-108 (277)
468 2gli_A Protein (five-finger GL 84.2 1.3 4.4E-05 39.5 5.6 77 45-122 66-151 (155)
469 3h7a_A Short chain dehydrogena 84.2 2.2 7.7E-05 41.8 7.8 78 296-389 5-90 (252)
470 4dry_A 3-oxoacyl-[acyl-carrier 84.0 1.5 5.2E-05 43.9 6.6 80 295-389 30-118 (281)
471 3ado_A Lambda-crystallin; L-gu 83.9 3 0.0001 43.0 8.8 114 298-427 6-128 (319)
472 3gvp_A Adenosylhomocysteinase 83.8 4.8 0.00016 43.2 10.5 38 295-333 217-256 (435)
473 3ioy_A Short-chain dehydrogena 83.8 2.9 0.0001 42.7 8.7 80 296-389 6-94 (319)
474 3v8b_A Putative dehydrogenase, 83.8 3.1 0.00011 41.6 8.8 78 296-389 26-112 (283)
475 1boo_A Protein (N-4 cytosine-s 83.5 1.1 3.8E-05 46.1 5.4 63 359-424 12-86 (323)
476 3swr_A DNA (cytosine-5)-methyl 83.5 1.4 4.9E-05 52.2 6.9 42 298-339 540-582 (1002)
477 3ius_A Uncharacterized conserv 83.5 6.1 0.00021 38.9 10.8 97 299-426 6-107 (286)
478 3o26_A Salutaridine reductase; 83.4 2.9 9.8E-05 41.8 8.3 80 296-390 10-99 (311)
479 3rkr_A Short chain oxidoreduct 83.2 3.3 0.00011 40.6 8.6 79 295-389 26-113 (262)
480 3l4b_C TRKA K+ channel protien 83.0 4.2 0.00015 38.8 9.1 93 300-419 2-96 (218)
481 3gaf_A 7-alpha-hydroxysteroid 83.0 3.3 0.00011 40.6 8.4 79 295-389 9-96 (256)
482 3uf0_A Short-chain dehydrogena 83.0 2.3 7.9E-05 42.3 7.4 78 295-389 28-113 (273)
483 3p2y_A Alanine dehydrogenase/p 82.8 0.71 2.4E-05 48.9 3.6 42 296-338 182-225 (381)
484 3tjr_A Short chain dehydrogena 82.6 4 0.00014 41.1 9.1 79 295-389 28-115 (301)
485 3rku_A Oxidoreductase YMR226C; 82.5 2.6 9E-05 42.3 7.6 82 296-390 31-123 (287)
486 3tnl_A Shikimate dehydrogenase 82.3 4.3 0.00015 41.7 9.2 45 284-329 140-187 (315)
487 3t7c_A Carveol dehydrogenase; 82.3 4.2 0.00015 40.9 9.2 79 295-389 25-124 (299)
488 3pgx_A Carveol dehydrogenase; 82.1 4.5 0.00016 40.1 9.2 79 295-389 12-112 (280)
489 4e12_A Diketoreductase; oxidor 82.0 3.3 0.00011 41.5 8.1 103 299-419 5-118 (283)
490 3imf_A Short chain dehydrogena 82.0 3.1 0.00011 40.8 7.8 79 295-389 3-90 (257)
491 1tf6_A Protein (transcription 82.0 1.4 4.9E-05 40.8 5.1 50 43-122 131-185 (190)
492 1xg5_A ARPG836; short chain de 82.0 4.5 0.00015 40.0 9.1 80 296-389 30-118 (279)
493 3sju_A Keto reductase; short-c 81.9 4.2 0.00014 40.5 8.8 78 296-389 22-108 (279)
494 2g5c_A Prephenate dehydrogenas 81.8 7.3 0.00025 38.6 10.6 88 299-419 2-93 (281)
495 1yb1_A 17-beta-hydroxysteroid 81.8 5.7 0.0002 39.2 9.8 94 280-389 12-115 (272)
496 4fs3_A Enoyl-[acyl-carrier-pro 81.5 3.4 0.00012 40.7 7.9 79 296-389 4-93 (256)
497 3o8q_A Shikimate 5-dehydrogena 81.5 9.3 0.00032 38.4 11.2 51 285-335 113-165 (281)
498 2ew2_A 2-dehydropantoate 2-red 81.3 11 0.00039 37.4 12.0 99 299-420 4-106 (316)
499 4fgs_A Probable dehydrogenase 81.3 3.6 0.00012 41.4 8.0 76 295-389 26-110 (273)
500 3l77_A Short-chain alcohol deh 81.2 3.9 0.00013 39.2 8.1 76 298-389 2-87 (235)
No 1
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=100.00 E-value=8.7e-66 Score=551.42 Aligned_cols=323 Identities=34% Similarity=0.590 Sum_probs=287.0
Q ss_pred hhhhhhhhcCCCCchhhHHhhcChhhhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHH
Q 006731 256 KKVNESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAV 335 (633)
Q Consensus 256 ~~~d~~yf~~Y~~~~~h~~mL~D~~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~ 335 (633)
+..|..||++|+++++|+.||+|.+||.+|++||.++...++|++|||||||||+||++||++||++|+|||.|+ |++.
T Consensus 42 ~~~d~~Yf~sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~ 120 (376)
T 4hc4_A 42 RERDQLYYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQ 120 (376)
T ss_dssp -------CCCHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHH
T ss_pred ccchhhhhhhccCcHHHHHHhCCHHHHHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHH
Confidence 456789999999999999999999999999999999888899999999999999999999999999999999997 7789
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCC
Q 006731 336 ATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG 415 (633)
Q Consensus 336 A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~Lkpg 415 (633)
|+++++.||+. ++|++++++++++. +| ++||+||||||+++|++|++++++++++.|+||||
T Consensus 121 a~~~~~~n~~~-------------~~i~~i~~~~~~~~----lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~ 182 (376)
T 4hc4_A 121 AREVVRFNGLE-------------DRVHVLPGPVETVE----LP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEG 182 (376)
T ss_dssp HHHHHHHTTCT-------------TTEEEEESCTTTCC----CS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEE
T ss_pred HHHHHHHcCCC-------------ceEEEEeeeeeeec----CC-ccccEEEeecccccccccchhhhHHHHHHhhCCCC
Confidence 99999999998 99999999999998 76 89999999999999999999999999999999999
Q ss_pred cEEEeecceeEEEEecCC--CCCccccccc---cCccccccchhhhhhh--CCCCeEEEcCCCCccCCCeeEEEeeCCCC
Q 006731 416 GAILPDTATMFVAGFGRG--GTSLPFWENV---YGFTMSCVGREVVQDA--AGIPIVDVVDDHDLVTDSVVLQTFDLATM 488 (633)
Q Consensus 416 G~lip~~~t~~~~~~~~~--~~~~~~w~~v---yG~d~s~~~~~~~~e~--~~~p~v~~~~~~~lls~p~~i~~~Dl~~~ 488 (633)
|+++|+.+++|++|+++. ...+.||.++ |||+|+++........ ...|.++.+++..++++|+.+++|||.++
T Consensus 183 G~~iP~~atly~apie~~~l~~~i~~w~~v~~~yGfd~s~~~~~~~~~~~~~~e~~v~~~~~~~~Ls~p~~i~~~D~~~~ 262 (376)
T 4hc4_A 183 GLLLPASAELFIVPISDQMLEWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRA 262 (376)
T ss_dssp EEEESCEEEEEEEEECCHHHHHHHHGGGGHHHHHSCCCGGGHHHHHHHHHSSCEEEEECCCGGGBCSCCEEEEEEETTCT
T ss_pred ceECCccceEEEEEeccchhhhhhcchhccccccCcCchhhhhhhhhhhcccCceEEEeecccccccCCEEEEEEECCCC
Confidence 999999999999999875 3456789887 9999999987554322 23478889999999999999999999998
Q ss_pred CCC---CceeeEEEEEEeeeCCCCCCccccccCcceeEEEEEEEEeeeccccCCCCCEEEecCCCCCCCCccceEEecCC
Q 006731 489 KHD---EVDFTTSVELEPKLGDSTSNSTELRSTSTWCYGIVLWFDAGFTSRFCKEKPVVLSTSPYTPKTHWSQTIITFRE 565 (633)
Q Consensus 489 ~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~g~~~wFd~~f~~~~~~~~~v~lST~P~~~~thW~Q~v~~l~~ 565 (633)
+.+ +..+..+|++++.++ |++|||++|||+.|+. .....+|.|||+|.+++|||+|++|+|++
T Consensus 263 ~~~~~~~~~~~~~f~~~~~~~-------------g~vhg~~~WFd~~f~~-~~~~~~v~lST~P~~~~THW~Q~v~~L~~ 328 (376)
T 4hc4_A 263 GLEQELEAGVGGRFRCSCYGS-------------APMHGFAIWFQVTFPG-GESEKPLVLSTSPFHPATHWKQALLYLNE 328 (376)
T ss_dssp THHHHHHHCEEEEEEEECCSS-------------EEEEEEEEEEEEEECC-CC--CCEEEECCTTSCCCTTCEEEEEEEE
T ss_pred CccccccccceeEEEEEecCC-------------cEEEEEEEEEEEEecC-CCCCCceEEeCCCCcCCCceeeEEEEeCC
Confidence 775 346888899998888 9999999999999974 12356799999999999999999999999
Q ss_pred ceecCCCCeEEEeecccCCCCCCcceeeEEEEEeeCCcc-eEEEEEEEEeeeCCCCCceeeeeE
Q 006731 566 PIALALGNLGADGSAAVGTDACPARRIHLRVSIARGAVH-RSIDISMETAGVGPDGQKRSWPAQ 628 (633)
Q Consensus 566 pi~v~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~i~~~~~~~~~~~~~~~~~~~ 628 (633)
|+.|++|++|+| ++++.++.++ |.++|+|+|...++.+..+.|++|
T Consensus 329 Pi~V~~G~~I~g-----------------~i~~~~~~~n~R~~~i~i~~~~~~~~~~~~~~~~~ 375 (376)
T 4hc4_A 329 PVQVEQDTDVSG-----------------EITLLPSRDNPRRLRVLLRYKVGDQEEKTKDFAME 375 (376)
T ss_dssp EEEECTTCEEEE-----------------EEEEEECSSCTTSEEEEEEEEETTSCCEEEEEEEC
T ss_pred ceEeCCCCEEEE-----------------EEEEEECCCCCceeEEEEEEEeCCCCcceEEEeCC
Confidence 999999999988 7778888865 999999999999988888999987
No 2
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=100.00 E-value=4.6e-53 Score=451.45 Aligned_cols=318 Identities=38% Similarity=0.711 Sum_probs=283.5
Q ss_pred hhhhhhcCCCCchhhHHhhcChhhhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHH
Q 006731 258 VNESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVAT 337 (633)
Q Consensus 258 ~d~~yf~~Y~~~~~h~~mL~D~~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~ 337 (633)
..+.||++|+.+.+|..|++|..|+..|.++|..+....++++|||||||+|.+++.++++|+++|+|||+|+ |++.|+
T Consensus 27 ~~~~yf~~y~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~ 105 (349)
T 3q7e_A 27 SKDYYFDSYAHFGIHEELLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAV 105 (349)
T ss_dssp ----------CCHHHHHHHHCHHHHHHHHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH
T ss_pred hHHHHHHhhhhhHHHHHHhccHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHH
Confidence 3467999999999999999999999999999998877788999999999999999999999988999999995 999999
Q ss_pred HHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcE
Q 006731 338 QIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGA 417 (633)
Q Consensus 338 ~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~ 417 (633)
++++.+++. ++|+++++++++++ ++.++||+|++++|++++.++.++..++.++.++|||||.
T Consensus 106 ~~~~~~~~~-------------~~v~~~~~d~~~~~----~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~ 168 (349)
T 3q7e_A 106 KIVKANKLD-------------HVVTIIKGKVEEVE----LPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGL 168 (349)
T ss_dssp HHHHHTTCT-------------TTEEEEESCTTTCC----CSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEE
T ss_pred HHHHHcCCC-------------CcEEEEECcHHHcc----CCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCE
Confidence 999999997 78999999999997 7778999999999999999999999999999999999999
Q ss_pred EEeecceeEEEEecCC---CCCccccccccCccccccchhhhhhhCCCCeEEEcCCCCccCCCeeEEEeeCCCCCCCCce
Q 006731 418 ILPDTATMFVAGFGRG---GTSLPFWENVYGFTMSCVGREVVQDAAGIPIVDVVDDHDLVTDSVVLQTFDLATMKHDEVD 494 (633)
Q Consensus 418 lip~~~t~~~~~~~~~---~~~~~~w~~vyG~d~s~~~~~~~~e~~~~p~v~~~~~~~lls~p~~i~~~Dl~~~~~~~~~ 494 (633)
++|+.++++++++... .....||.++|||+|+++....+.+ |.++.+++..++++|+.+.+||+.+++.+++.
T Consensus 169 li~~~~~~~~~~~~~~~~~~~~~~~w~~~~G~d~~~~~~~~~~~----p~v~~~~~~~~~~~~~~~~~~dl~~~~~~~l~ 244 (349)
T 3q7e_A 169 IFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKE----PLVDVVDPKQLVTNACLIKEVDIYTVKVEDLT 244 (349)
T ss_dssp EESCEEEEEEEEECCHHHHHHHTGGGGCBTTBCCGGGHHHHHTS----CEEECCCGGGEEEEEEEEEEEETTTCCGGGGS
T ss_pred EccccceEEEeeecChhhhhhhhcccccccCcchHHHhHhhhcC----cEEEEEChhhEecccEEEEEEEcccCchhhcc
Confidence 9999999999999765 3467899999999999999877777 99999999999999999999999999999999
Q ss_pred eeEEEEEEeeeCCCCCCccccccCcceeEEEEEEEEeeeccccCCCCCEEEecCCCCCCCCccceEEecCCceecCCCCe
Q 006731 495 FTTSVELEPKLGDSTSNSTELRSTSTWCYGIVLWFDAGFTSRFCKEKPVVLSTSPYTPKTHWSQTIITFREPIALALGNL 574 (633)
Q Consensus 495 ~~~~~~l~~~~~~~~~~~~~~~~~~g~~~g~~~wFd~~f~~~~~~~~~v~lST~P~~~~thW~Q~v~~l~~pi~v~~G~~ 574 (633)
+.++|+++++++ |.+|||++|||+.|++ +..+|.|||+|.++.|||+|++|+|++|+.|++|++
T Consensus 245 ~~~~~~~~~~~~-------------~~~~g~~~~Fd~~~~~---~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g~~ 308 (349)
T 3q7e_A 245 FTSPFCLQVKRN-------------DYVHALVAYFNIEFTR---CHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKTGEE 308 (349)
T ss_dssp EEEEEEEEBCSS-------------EEEEEEEEEEEEECTT---SSSCCEEECSTTSCCCTTCEEEEEEEEEEEECTTCE
T ss_pred eeeeEEEEEccC-------------CEEEEEEEEEEEEecC---CCCccEEECCCCcCCCcceeEEEEECCceEeCCCCE
Confidence 999999999988 9999999999999984 556899999999999999999999999999999999
Q ss_pred EEEeecccCCCCCCcceeeEEEEEeeCCcc-eEEEEEEEEeeeCCCCCceeeeeEEeec
Q 006731 575 GADGSAAVGTDACPARRIHLRVSIARGAVH-RSIDISMETAGVGPDGQKRSWPAQIFNL 632 (633)
Q Consensus 575 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~i~~~~~~~~~~~~~~~~~~~~~~~ 632 (633)
|+| ++++.++.++ |.++|+|+|...+..+... .-|.|.+
T Consensus 309 i~~-----------------~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~ 348 (349)
T 3q7e_A 309 IFG-----------------TIGMRPNAKNNRDLDFTIDLDFKGQLCELS--CSTDYRM 348 (349)
T ss_dssp EEE-----------------EEEEEECSSCSSCEEEEEEEEEECSSCEEE--EEEEEEE
T ss_pred EEE-----------------EEEEEECCCCCeeEEEEEEEEeCCcccccc--cCceEec
Confidence 988 6777788765 9999999999888765543 4455543
No 3
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=100.00 E-value=3e-52 Score=441.52 Aligned_cols=319 Identities=38% Similarity=0.673 Sum_probs=285.0
Q ss_pred hhhcCCCCchhhHHhhcChhhhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHH
Q 006731 261 SYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIA 340 (633)
Q Consensus 261 ~yf~~Y~~~~~h~~mL~D~~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~ 340 (633)
.||++|+++++|..|++|..|+.+|.++|.++....++++|||||||+|.++++++++|+.+|+|||.|+ +++.|++++
T Consensus 2 ~Yf~~y~~~~~~~~ml~d~~r~~~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~a~~~~ 80 (328)
T 1g6q_1 2 YYFDSYDHYGIHEEMLQDTVRTLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMAKELV 80 (328)
T ss_dssp CCCCCCCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHHHHHHH
T ss_pred chhhhhcCchHHHHHhcCHHHHHHHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHHHHHHH
Confidence 5999999999999999999999999999987766778999999999999999999999988999999995 889999999
Q ss_pred HhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 341 KDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 341 ~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+.+++. ++|+++++++++++ ++.++||+|+++++++++.++.++..++.++.++|||||.++|
T Consensus 81 ~~~~~~-------------~~i~~~~~d~~~~~----~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 81 ELNGFS-------------DKITLLRGKLEDVH----LPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp HHTTCT-------------TTEEEEESCTTTSC----CSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred HHcCCC-------------CCEEEEECchhhcc----CCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 999997 88999999999987 7768999999999999999999999999999999999999999
Q ss_pred ecceeEEEEecCC---CCCccccccccCccccccchhhhhhhCCCCeEEEcCCCCccCCCeeEEEeeCCCCCCCCceeeE
Q 006731 421 DTATMFVAGFGRG---GTSLPFWENVYGFTMSCVGREVVQDAAGIPIVDVVDDHDLVTDSVVLQTFDLATMKHDEVDFTT 497 (633)
Q Consensus 421 ~~~t~~~~~~~~~---~~~~~~w~~vyG~d~s~~~~~~~~e~~~~p~v~~~~~~~lls~p~~i~~~Dl~~~~~~~~~~~~ 497 (633)
+.++++++++.+. .....+|.++|||+++++......+ |.++.+++..++++|+.+++|||.+++.+++.+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~w~~~~gf~~~~~~~~~~~~----~~v~~~~~~~~ls~~~~~~~~d~~~~~~~~~~~~~ 219 (328)
T 1g6q_1 144 DKCSIHLAGLEDSQYKDEKLNYWQDVYGFDYSPFVPLVLHE----PIVDTVERNNVNTTSDKLIEFDLNTVKISDLAFKS 219 (328)
T ss_dssp CEEEEEEEEECCHHHHHHHHHHTTCBTTBCCTTHHHHHTTS----CEEECCCGGGBCBCCEEEEEEETTTCCGGGGSEEE
T ss_pred eeceEEEEEecCchhhhhhhcccccccCcChHHHhhhhhcC----CeEEEeccceeecCCEEEEEEECCCCChhHhceee
Confidence 9999999998764 3455789999999999988766555 99999999999999999999999999999999999
Q ss_pred EEEEEeeeCCCCCCccccccCcceeEEEEEEEEeeeccccCCCCCEEEecCCCCCCCCccceEEecCCceecCCCCeEEE
Q 006731 498 SVELEPKLGDSTSNSTELRSTSTWCYGIVLWFDAGFTSRFCKEKPVVLSTSPYTPKTHWSQTIITFREPIALALGNLGAD 577 (633)
Q Consensus 498 ~~~l~~~~~~~~~~~~~~~~~~g~~~g~~~wFd~~f~~~~~~~~~v~lST~P~~~~thW~Q~v~~l~~pi~v~~G~~i~~ 577 (633)
+|+++++++ |++|||++|||+.|+.. .+.+++.|||+|..+.|||+|++|+|++|+.|++|++|+|
T Consensus 220 ~~~~~~~~~-------------g~~~g~~~wfd~~~~~~-~~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g~~i~~ 285 (328)
T 1g6q_1 220 NFKLTAKRQ-------------DMINGIVTWFDIVFPAP-KGKRPVEFSTGPHAPYTHWKQTIFYFPDDLDAETGDTIEG 285 (328)
T ss_dssp EEEEEBCSS-------------CEEEEEEEEEEEECCCC-TTSCCCEEECSTTSCCCTTCEEEEEEEEEEECCTTCEEEE
T ss_pred eEEEEEecC-------------cEEEEEEEEEEEEcCCC-CCCCceEEECCCCcCCCcceeEEEEeCCceecCCCCEEEE
Confidence 999999988 99999999999999831 1345799999999999999999999999999999999987
Q ss_pred eecccCCCCCCcceeeEEEEEeeCCcc-eEEEEEEEEeeeCCCC---CceeeeeEEeec
Q 006731 578 GSAAVGTDACPARRIHLRVSIARGAVH-RSIDISMETAGVGPDG---QKRSWPAQIFNL 632 (633)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~i~~~~~~~~~~~---~~~~~~~~~~~~ 632 (633)
++++.++.++ |.++|.++|...+..+ .+..-.-|.|.+
T Consensus 286 -----------------~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (328)
T 1g6q_1 286 -----------------ELVCSPNEKNNRDLNIKISYKFESNGIDGNSRSRKNEGSYLM 327 (328)
T ss_dssp -----------------EEEEEEETTEEEEEEEEEEEEEECCSSTHHHHCEEEEEEEEE
T ss_pred -----------------EEEEEECCCCCceEEEEEEEEecCccCcccccccccceeEEe
Confidence 6777777765 9999999998887665 112234556765
No 4
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=100.00 E-value=1.5e-51 Score=438.24 Aligned_cols=314 Identities=36% Similarity=0.709 Sum_probs=280.4
Q ss_pred hhhhhhhhcCCCCchhhHHhhcChhhhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHH
Q 006731 256 KKVNESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAV 335 (633)
Q Consensus 256 ~~~d~~yf~~Y~~~~~h~~mL~D~~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~ 335 (633)
...+..||++|+.+++|..|++|..|+..|+++|.++....++++|||||||+|.+++.++++|+.+|+|||+|+ |++.
T Consensus 23 ~~~d~~Y~~~y~~~~~~~~ml~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~ 101 (340)
T 2fyt_A 23 EDEDGVYFSSYGHYGIHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQ 101 (340)
T ss_dssp -------CCGGGSHHHHHHHHTCHHHHHHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHH
T ss_pred ccchhhHHHhhcchhHHHHHhcCHHHHHHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHH
Confidence 455667999999999999999999999999999999888889999999999999999999999988999999997 8999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCC
Q 006731 336 ATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG 415 (633)
Q Consensus 336 A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~Lkpg 415 (633)
|+++++.+++. ++|+++++|+++++ ++.++||+|++++|++++.++.++..++.++.++||||
T Consensus 102 a~~~~~~~~~~-------------~~i~~~~~d~~~~~----~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~Lkpg 164 (340)
T 2fyt_A 102 AMDIIRLNKLE-------------DTITLIKGKIEEVH----LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKG 164 (340)
T ss_dssp HHHHHHHTTCT-------------TTEEEEESCTTTSC----CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEE
T ss_pred HHHHHHHcCCC-------------CcEEEEEeeHHHhc----CCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCC
Confidence 99999999987 89999999999987 77789999999999999999999999999999999999
Q ss_pred cEEEeecceeEEEEecCC---CCCccccccccCccccccchhhhhhhCCCCeEEEcCCCCccCCCeeEEEeeCCCCCCCC
Q 006731 416 GAILPDTATMFVAGFGRG---GTSLPFWENVYGFTMSCVGREVVQDAAGIPIVDVVDDHDLVTDSVVLQTFDLATMKHDE 492 (633)
Q Consensus 416 G~lip~~~t~~~~~~~~~---~~~~~~w~~vyG~d~s~~~~~~~~e~~~~p~v~~~~~~~lls~p~~i~~~Dl~~~~~~~ 492 (633)
|.++|+.++++++++.+. .....||.++|||+++.+....+.+ |.++.+++..++++|+.+.++||.+.+.++
T Consensus 165 G~lip~~~~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~----~~v~~~~~~~~ls~p~~~~~~d~~~~~~~~ 240 (340)
T 2fyt_A 165 GSVYPDICTISLVAVSDVNKHADRIAFWDDVYGFKMSCMKKAVIPE----AVVEVLDPKTLISEPCGIKHIDCHTTSISD 240 (340)
T ss_dssp EEEESCEEEEEEEEECCHHHHHHHTGGGGCBTTBCCGGGHHHHTTB----CEEECCCGGGBCBCCEEEEEEETTTCCGGG
T ss_pred cEEEcccceEEEEEecchhHhhhhhcccccccCcChHHHHHhhhcC----cEEEEechhhcccCCEEEEEEECCCCcccc
Confidence 999999999999998754 3456799999999999988766555 999999999999999999999999999999
Q ss_pred ceeeEEEEEEeeeCCCCCCccccccCcceeEEEEEEEEeeeccccCCCCCEEEecCCCCCCCCccceEEecCCceecCCC
Q 006731 493 VDFTTSVELEPKLGDSTSNSTELRSTSTWCYGIVLWFDAGFTSRFCKEKPVVLSTSPYTPKTHWSQTIITFREPIALALG 572 (633)
Q Consensus 493 ~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~g~~~wFd~~f~~~~~~~~~v~lST~P~~~~thW~Q~v~~l~~pi~v~~G 572 (633)
+.|+..|.+++.++ |.+|||++|||+.|+. .+.+++.|||+|..+.|||+|++|+|++|+.|++|
T Consensus 241 ~~~~~~~~~~~~~~-------------~~~~g~~~wfd~~~~~--~~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g 305 (340)
T 2fyt_A 241 LEFSSDFTLKITRT-------------SMCTAIAGYFDIYFEK--NCHNRVVFSTGPQSTKTHWKQTVFLLEKPFSVKAG 305 (340)
T ss_dssp GSEEEEEEEEBCSC-------------EEEEEEEEEEEEEECT--TCSSCEEEECSTTSCCCTTCEEEEEEEEEEEECTT
T ss_pred cceEeeEEEEEccC-------------cEEEEEEEEEEEEeec--CCCCCEEEECCCCcCCCccccEEEEeCCceEcCCC
Confidence 99999999999988 9999999999999942 25578999999999999999999999999999999
Q ss_pred CeEEEeecccCCCCCCcceeeEEEEEeeCCcc-eEEEEEEEEeeeCCCCCceeeeeE
Q 006731 573 NLGADGSAAVGTDACPARRIHLRVSIARGAVH-RSIDISMETAGVGPDGQKRSWPAQ 628 (633)
Q Consensus 573 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~i~~~~~~~~~~~~~~~~~~~ 628 (633)
++|.| ++.+.++.++ |.++|.|+|.. .++.|.+|
T Consensus 306 ~~i~~-----------------~~~~~~~~~~~r~~~~~~~~~~-----~~~~~~~~ 340 (340)
T 2fyt_A 306 EALKG-----------------KVTVHKNKKDPRSLTVTLTLNN-----STQTYGLQ 340 (340)
T ss_dssp CEEEE-----------------EEEEEECSSCTTSEEEEEEETT-----EEEEEEEC
T ss_pred CEEEE-----------------EEEEEECCCCCceEEEEEEEEc-----ceEEEecC
Confidence 99988 6667777765 99999999944 36677765
No 5
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=100.00 E-value=7.3e-51 Score=438.67 Aligned_cols=317 Identities=31% Similarity=0.538 Sum_probs=280.5
Q ss_pred hhhhhhcCCCCchhhHHhhcChhhhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHH
Q 006731 258 VNESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVAT 337 (633)
Q Consensus 258 ~d~~yf~~Y~~~~~h~~mL~D~~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~ 337 (633)
..+.||++|+.+..|..|++|..|+..|.++|..+....++++|||||||+|.++++++++|+++|+|||+| .|++.|+
T Consensus 24 ~~~~yf~~ya~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~ 102 (376)
T 3r0q_C 24 DYAQYFCTYSFLYHQKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHAR 102 (376)
T ss_dssp ----CTTGGGCHHHHHHHHTCHHHHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHH
T ss_pred cHHHHHHHHHHhHHHHHHhcChHHHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHH
Confidence 356899999999999999999999999999999988889999999999999999999999999999999999 8999999
Q ss_pred HHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcE
Q 006731 338 QIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGA 417 (633)
Q Consensus 338 ~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~ 417 (633)
++++.+++. ++|++++++++++. ++ ++||+|++++|+|++.++.++..++.++.++|||||.
T Consensus 103 ~~~~~~~~~-------------~~v~~~~~d~~~~~----~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~ 164 (376)
T 3r0q_C 103 ALVKANNLD-------------HIVEVIEGSVEDIS----LP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGV 164 (376)
T ss_dssp HHHHHTTCT-------------TTEEEEESCGGGCC----CS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEE
T ss_pred HHHHHcCCC-------------CeEEEEECchhhcC----cC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeE
Confidence 999999997 88999999999988 66 8999999999999999999999999999999999999
Q ss_pred EEeecceeEEEEecCCC---CCc----------ccc---ccccCccccccchhhhhh----hCCCCeEEEcCCCCccCCC
Q 006731 418 ILPDTATMFVAGFGRGG---TSL----------PFW---ENVYGFTMSCVGREVVQD----AAGIPIVDVVDDHDLVTDS 477 (633)
Q Consensus 418 lip~~~t~~~~~~~~~~---~~~----------~~w---~~vyG~d~s~~~~~~~~e----~~~~p~v~~~~~~~lls~p 477 (633)
++|+.++++++++.+.. ... .|| .++||++|+++......+ ....|.++++.|..++++|
T Consensus 165 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~fw~~~~~~~G~d~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~lt~~ 244 (376)
T 3r0q_C 165 MYPSHARMWLAPIKSNIADRKRNDFDGAMADWHNFSDEIKSYYGVDMGVLTKPFAEEQEKYYIQTAMWNDLNPQQIIGTP 244 (376)
T ss_dssp EESSEEEEEEEEECCTHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCGGGHHHHHHHHHHHHTSBCEEECCCGGGBCBCC
T ss_pred EEEecCeEEEEeecchHHhhhhhhhhhhhhhhhhhhhccCccccCChHHHHhhhhhhhhhhcccCceEEEEChHHccCCC
Confidence 99999999999987651 111 688 789999999998752221 2345999999999999999
Q ss_pred eeEEEeeCCCCCCCCce-eeEEEEEEe-eeCCCCCCccccccCcceeEEEEEEEEeeecccc--CCCCCEEEecCCC-CC
Q 006731 478 VVLQTFDLATMKHDEVD-FTTSVELEP-KLGDSTSNSTELRSTSTWCYGIVLWFDAGFTSRF--CKEKPVVLSTSPY-TP 552 (633)
Q Consensus 478 ~~i~~~Dl~~~~~~~~~-~~~~~~l~~-~~~~~~~~~~~~~~~~g~~~g~~~wFd~~f~~~~--~~~~~v~lST~P~-~~ 552 (633)
+.+++|||.+++.+++. ++.+|++++ .++ |.+|||++|||+.|++.. .+.++|.|||+|. .+
T Consensus 245 ~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~-------------~~~~g~~~wfd~~~~~~~~~~~~~~v~lSt~P~~~~ 311 (376)
T 3r0q_C 245 TIVKEMDCLTASVSEIEEVRSNVTSVINMEH-------------TRLCGFGGWFDVQFSGRKEDPAQQEIELTTAPSEQH 311 (376)
T ss_dssp EEEEEEETTTCCGGGTSEEEEEEEEBCSCSC-------------EEEEEEEEEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred eEEEEEEcCcCCHHHhcccccceEEEEeccC-------------ceEEEEEEEEEEEecCCccCCCCCccEEECCCCcCC
Confidence 99999999999999886 899999998 777 999999999999997310 0134699999999 57
Q ss_pred CCCccceEEecCCceecCCCCeEEEeecccCCCCCCcceeeEEEEEeeCCcc-eEEEEEEEEeeeCCCCCce
Q 006731 553 KTHWSQTIITFREPIALALGNLGADGSAAVGTDACPARRIHLRVSIARGAVH-RSIDISMETAGVGPDGQKR 623 (633)
Q Consensus 553 ~thW~Q~v~~l~~pi~v~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~i~~~~~~~~~~~~~~ 623 (633)
.|||+|++|+|++|+.|++|++|+| ++++.++.++ |.++|+|+|...+.+|...
T Consensus 312 ~thW~q~~~~l~~p~~v~~g~~i~~-----------------~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 366 (376)
T 3r0q_C 312 CTHWGQQVFIMSNPINVEEGDNLNL-----------------GLLMSRSKENHRLMEIELNCEIKEASGNPK 366 (376)
T ss_dssp CCTTCEEEEEEEEEEEECTTCEEEE-----------------EEEEEECSSCTTSEEEEEEEEEECSSSCCC
T ss_pred CCceeeEEEEECCceecCCCCEEEE-----------------EEEEEECCCCCeeEEEEEEEEecCcCCCCC
Confidence 9999999999999999999999988 7778888875 9999999999888876554
No 6
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=100.00 E-value=2.6e-46 Score=418.82 Aligned_cols=294 Identities=17% Similarity=0.205 Sum_probs=249.3
Q ss_pred hhhHHhhcChhhhHHHHHHHHhCCCC-C----CCCEEEEECCCcchHHHHHHHcC--C------------CeEEEEeCCH
Q 006731 270 GIHREMISDKVRTDSYRQAILENPSL-M----KGAVVMDIGCGTGILSLFAAQAG--A------------SRVIAVEASE 330 (633)
Q Consensus 270 ~~h~~mL~D~~R~~~y~~aI~~~~~~-~----~~~~VLDVGcGtG~lsl~~a~aG--a------------~~V~aVD~S~ 330 (633)
..+..|.+|++|+.+|++||..+... . ++++|||||||+|+|++++++++ + .+|||||.|+
T Consensus 377 ~tYe~fekD~vRy~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp 456 (745)
T 3ua3_A 377 GVYNTFEQDQIKYDVYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNP 456 (745)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCH
T ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCCh
Confidence 56789999999999999999987432 1 35799999999999987765553 3 3999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccC-----CCcccEEEEecccccccChhhHHHHH
Q 006731 331 KMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQ-----PHSVDVLVSEWMGYCLLYESMLSSVL 405 (633)
Q Consensus 331 ~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~-----~~~~DvIvse~mg~~L~~e~~l~~vl 405 (633)
.++..++.+ ..|++. ++|++++++++++. +| .+++|||||||||+++.+|-+ +.+|
T Consensus 457 ~A~~~l~~~-~~Ng~~-------------d~VtVI~gd~eev~----lp~~~~~~ekVDIIVSElmGsfl~nEL~-pe~L 517 (745)
T 3ua3_A 457 NAIVTLKYM-NVRTWK-------------RRVTIIESDMRSLP----GIAKDRGFEQPDIIVSELLGSFGDNELS-PECL 517 (745)
T ss_dssp HHHHHHHHH-HHHTTT-------------TCSEEEESCGGGHH----HHHHHTTCCCCSEEEECCCBTTBGGGSH-HHHH
T ss_pred HHHHHHHHH-HhcCCC-------------CeEEEEeCchhhcc----cccccCCCCcccEEEEeccccccchhcc-HHHH
Confidence 877444444 458997 89999999999998 63 589999999999999998854 5588
Q ss_pred HHHhhcccCCcEEEeecceeEEEEecCCCCCccccccccCcccc----------------------------ccchhhhh
Q 006731 406 FARDQWLKPGGAILPDTATMFVAGFGRGGTSLPFWENVYGFTMS----------------------------CVGREVVQ 457 (633)
Q Consensus 406 ~a~~r~LkpgG~lip~~~t~~~~~~~~~~~~~~~w~~vyG~d~s----------------------------~~~~~~~~ 457 (633)
..+.|+|||||++||+.+++|++|+.++ .+|.+++|++++ |.....+.
T Consensus 518 d~v~r~Lkp~Gi~iP~~~t~ylaPi~~~----~l~~~v~~~~~~~~~~G~p~~g~~~P~~~~~g~~i~~~~~~~~~~a~e 593 (745)
T 3ua3_A 518 DGVTGFLKPTTISIPQKYTSYVKPIMST----HIHQTIKAQSIPYLSRAIPSHGRGEPELDEDEMWIQKYPQGHVRNNMD 593 (745)
T ss_dssp HTTGGGSCTTCEEESCEEEEEEEEEECH----HHHHHHHTCCCCGGGTTSCCSSSCCCEECTTSCEECCCTTCHHHHHHS
T ss_pred HHHHHhCCCCcEEECCccEEEEEEecCH----HHHHHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 8889999999999999999999999865 457777776653 22333333
Q ss_pred hhCCCCeEEEcCCCCccCC-CeeEEEeeCCCCCCCCceeeEEEEEEeeeCCCCCCccccccCcceeEEEEEEEEeeeccc
Q 006731 458 DAAGIPIVDVVDDHDLVTD-SVVLQTFDLATMKHDEVDFTTSVELEPKLGDSTSNSTELRSTSTWCYGIVLWFDAGFTSR 536 (633)
Q Consensus 458 e~~~~p~v~~~~~~~lls~-p~~i~~~Dl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~g~~~wFd~~f~~~ 536 (633)
.|.|..+.+..++++ |+.+++||+.+....++.|.+.|+|++.++ |.+|||++|||+.|+
T Consensus 594 ----~PyVv~l~~~~~Ls~~pq~vftFdhp~~~~~d~~r~~~~~F~~~r~-------------g~iHGfagwFDi~Ly-- 654 (745)
T 3ua3_A 594 ----QIYVVYLSKYIPLAETTKPVFTFEHPNFMNSSNERSDSIEFVMDRN-------------ADLMGFAGYFDLQLY-- 654 (745)
T ss_dssp ----SCEEECCCSCEESSSSCEEEEEEESSCTTCCCSCEEEEEEEECCSS-------------EEEEEEEEEEEEEEE--
T ss_pred ----ccEEEeeccceecCCCCceEEEEECCCCCccccceeEEEEEEeCCC-------------cEEEEEEEEEEEEec--
Confidence 499999999999999 999999999999888899999999999998 999999999999999
Q ss_pred cCCCCCEEEecCCCCC---CCCccceEEecCCceecCCCCeEEEeecccCCCCCCcceeeEEEEEeeCCcceEEEEEEEE
Q 006731 537 FCKEKPVVLSTSPYTP---KTHWSQTIITFREPIALALGNLGADGSAAVGTDACPARRIHLRVSIARGAVHRSIDISMET 613 (633)
Q Consensus 537 ~~~~~~v~lST~P~~~---~thW~Q~v~~l~~pi~v~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~i~~~~ 613 (633)
++|.|||+|.++ .|||+|++|||++|+.|++|++|.| +|+|..+.+++++++..
T Consensus 655 ----k~V~LST~P~t~s~~mThWfQtfFPL~ePL~V~~GdeI~g-------------------~~~R~~d~~kVWYEW~v 711 (745)
T 3ua3_A 655 ----KTVMLSIEPSTHTPGMVSWFPAVIPLRDQLRVGEGDRISL-------------------KIDRKVDNTGVWYEWHV 711 (745)
T ss_dssp ----TTEEEECSSTTCCTTCCSCCCEEEEEEEEEEECTTCEEEE-------------------EEEEEEETTEEEEEEEE
T ss_pred ----CCcEEecCCCCCCCCCccceeEEEecCCceEeCCCCEEEE-------------------EEEEEcCCCCEEEEEEE
Confidence 469999999986 5899999999999999999999955 55677777999999999
Q ss_pred eeeCCCCCceeeeeE
Q 006731 614 AGVGPDGQKRSWPAQ 628 (633)
Q Consensus 614 ~~~~~~~~~~~~~~~ 628 (633)
+..+++|....+++|
T Consensus 712 ~~~~~~g~p~~~~ih 726 (745)
T 3ua3_A 712 EKKKTNGESVSTPIQ 726 (745)
T ss_dssp EEECTTSCEEECCCB
T ss_pred EeccCCCCccccccC
Confidence 888888888766554
No 7
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=100.00 E-value=3.7e-46 Score=420.24 Aligned_cols=276 Identities=18% Similarity=0.208 Sum_probs=234.1
Q ss_pred hHHhhcChhhhHHHHHHHHhCC--------CCCCCCEEEEECCCcchHHHHHHHcCCC-----eEEEEeCCHHHHHHHHH
Q 006731 272 HREMISDKVRTDSYRQAILENP--------SLMKGAVVMDIGCGTGILSLFAAQAGAS-----RVIAVEASEKMAAVATQ 338 (633)
Q Consensus 272 h~~mL~D~~R~~~y~~aI~~~~--------~~~~~~~VLDVGcGtG~lsl~~a~aGa~-----~V~aVD~S~~~~~~A~~ 338 (633)
.+.+=+|++|++.|.+||.+++ ...++++|||||||+|+|++++++||++ +|||||.|+.+. .|++
T Consensus 324 YevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~-~a~~ 402 (637)
T 4gqb_A 324 YEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV-VTLE 402 (637)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH-HHHH
T ss_pred hhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH-HHHH
Confidence 3445589999999999998632 3355679999999999998888888653 799999998655 9999
Q ss_pred HHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEE
Q 006731 339 IAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAI 418 (633)
Q Consensus 339 ~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~l 418 (633)
+++.|++. ++|++|+|+++++. +| +++||||||||||+|++|.|+ +++.+++|+|||||++
T Consensus 403 ~v~~N~~~-------------dkVtVI~gd~eev~----LP-EKVDIIVSEwMG~fLl~E~ml-evL~Ardr~LKPgGim 463 (637)
T 4gqb_A 403 NWQFEEWG-------------SQVTVVSSDMREWV----AP-EKADIIVSELLGSFADNELSP-ECLDGAQHFLKDDGVS 463 (637)
T ss_dssp HHHHHTTG-------------GGEEEEESCTTTCC----CS-SCEEEEECCCCBTTBGGGCHH-HHHHHHGGGEEEEEEE
T ss_pred HHHhccCC-------------CeEEEEeCcceecc----CC-cccCEEEEEcCcccccccCCH-HHHHHHHHhcCCCcEE
Confidence 99999998 99999999999998 76 899999999999999999997 7999999999999999
Q ss_pred EeecceeEEEEecCC---CCCccccccccCccccccchhhhhhhCCCCeEEEcCCCCccCCCeeEEEeeCCCCCC-CCce
Q 006731 419 LPDTATMFVAGFGRG---GTSLPFWENVYGFTMSCVGREVVQDAAGIPIVDVVDDHDLVTDSVVLQTFDLATMKH-DEVD 494 (633)
Q Consensus 419 ip~~~t~~~~~~~~~---~~~~~~w~~vyG~d~s~~~~~~~~e~~~~p~v~~~~~~~lls~p~~i~~~Dl~~~~~-~~~~ 494 (633)
+|+.+++|++|+.+. .+...+|...+++++. +..|.+..+.+..++++|..+++||+.+... .+..
T Consensus 464 iPs~atlyiapi~~~~l~~e~~~~~~~~~~~~~~----------~~~p~Vv~~~~~~~Ls~p~~~~~fd~~~~~~~~~~~ 533 (637)
T 4gqb_A 464 IPGEYTSFLAPISSSKLYNEVRACREKDRDPEAQ----------FEMPYVVRLHNFHQLSAPQPCFTFSHPNRDPMIDNN 533 (637)
T ss_dssp ESCEEEEEEEEEECHHHHHHHHTTCCTTSCTTGG----------GGSCEECBCCSCEECSCCEEEEEEESSCCSTTCCCC
T ss_pred ccccceEEEEEecCHHHHHHHHhcccccccchhh----------cCCcEEEEecCccccCCCEEEEEEECCCCCccccce
Confidence 999999999999866 2344566666666543 1238888888899999999999999977654 4557
Q ss_pred eeEEEEEEeeeCCCCCCccccccCcceeEEEEEEEEeeeccccCCCCCEEEecCCCC---CCCCccceEEecCCceecCC
Q 006731 495 FTTSVELEPKLGDSTSNSTELRSTSTWCYGIVLWFDAGFTSRFCKEKPVVLSTSPYT---PKTHWSQTIITFREPIALAL 571 (633)
Q Consensus 495 ~~~~~~l~~~~~~~~~~~~~~~~~~g~~~g~~~wFd~~f~~~~~~~~~v~lST~P~~---~~thW~Q~v~~l~~pi~v~~ 571 (633)
+..+|+|+++++ |++|||++|||+.|+ ++|.|||+|.+ +.|||+|++|+|++|+.|++
T Consensus 534 ~~~~~~f~i~~~-------------g~vhGf~~wFD~~f~------~~V~LST~P~~~s~~~THW~Q~vfpL~~Pl~V~~ 594 (637)
T 4gqb_A 534 RYCTLEFPVEVN-------------TVLHGFAGYFETVLY------QDITLSIRPETHSPGMFSWFPILFPIKQPITVRE 594 (637)
T ss_dssp EEEEEEEECCSC-------------EEEEEEEEEEEEEEE------TTEEEECSGGGCCTTCCSCCCEEEEEEEEEEECT
T ss_pred EEEEEEEEecCC-------------cEEEEEEEEEEEEee------CCeEEECCCCCCCCCCCcccCeEEEeCCCeEECC
Confidence 889999999988 999999999999998 46999999974 46999999999999999999
Q ss_pred CCeEEEeecccCCCCCCcceeeEEEEEeeCCcceEEEEEEEEee
Q 006731 572 GNLGADGSAAVGTDACPARRIHLRVSIARGAVHRSIDISMETAG 615 (633)
Q Consensus 572 G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~i~~~~~~ 615 (633)
|++|+| +|+|..+++++++++..+.
T Consensus 595 Gd~I~~-------------------~~~R~~d~~kVWYEW~v~~ 619 (637)
T 4gqb_A 595 GQTICV-------------------RFWRCSNSKKVWYEWAVTA 619 (637)
T ss_dssp TCEEEE-------------------EEEEEECSSEEEEEEEEEE
T ss_pred CCEEEE-------------------EEEEEeCCCceeEEEEEeC
Confidence 999965 4567777788777776544
No 8
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=100.00 E-value=1.2e-44 Score=386.35 Aligned_cols=303 Identities=32% Similarity=0.534 Sum_probs=258.4
Q ss_pred hhhhhhcCCCCchhhHHhhcChhhhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHH
Q 006731 258 VNESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVAT 337 (633)
Q Consensus 258 ~d~~yf~~Y~~~~~h~~mL~D~~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~ 337 (633)
..+.||++|+.+..|..|++|..|+..|.++|.......++++|||||||+|.+++.++++|+.+|+|||.|+ +++.|+
T Consensus 11 ~~~~y~~~y~~~~~~~~ml~d~~r~~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~ 89 (348)
T 2y1w_A 11 SAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE 89 (348)
T ss_dssp HHHHHHHHHTCHHHHHHHHTCHHHHHHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH
T ss_pred cHHHHHHHHhhhhHHHHHhcchHHHHHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHH
Confidence 3567999999999999999999999999999999888889999999999999999999999988999999997 788999
Q ss_pred HHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcE
Q 006731 338 QIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGA 417 (633)
Q Consensus 338 ~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~ 417 (633)
++++.+++. ++|+++++++++++ ++ ++||+||+++|++++..+.++..+. .+.++|||||.
T Consensus 90 ~~~~~~~l~-------------~~v~~~~~d~~~~~----~~-~~~D~Ivs~~~~~~~~~~~~~~~l~-~~~~~LkpgG~ 150 (348)
T 2y1w_A 90 VLVKSNNLT-------------DRIVVIPGKVEEVS----LP-EQVDIIISEPMGYMLFNERMLESYL-HAKKYLKPSGN 150 (348)
T ss_dssp HHHHHTTCT-------------TTEEEEESCTTTCC----CS-SCEEEEEECCCBTTBTTTSHHHHHH-HGGGGEEEEEE
T ss_pred HHHHHcCCC-------------CcEEEEEcchhhCC----CC-CceeEEEEeCchhcCChHHHHHHHH-HHHhhcCCCeE
Confidence 999999987 88999999999987 55 7899999999988887776655554 56799999999
Q ss_pred EEeecceeEEEEecCCC------CCcccc--ccccCccccccchhhhhhhCCCCeEEEcCCCCccCCCeeEEEeeCCCCC
Q 006731 418 ILPDTATMFVAGFGRGG------TSLPFW--ENVYGFTMSCVGREVVQDAAGIPIVDVVDDHDLVTDSVVLQTFDLATMK 489 (633)
Q Consensus 418 lip~~~t~~~~~~~~~~------~~~~~w--~~vyG~d~s~~~~~~~~e~~~~p~v~~~~~~~lls~p~~i~~~Dl~~~~ 489 (633)
++|+.++++++++.... ....|| ..++|++++.+........+..|+++..+... ...+.....+||.+..
T Consensus 151 li~~~~~~~~~~i~~~~~~~~~~~~~~~w~~~~~~g~d~~~l~~~~~~~~f~~p~~d~~~~~~-~~~~~~~~~~df~~~~ 229 (348)
T 2y1w_A 151 MFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRI-LMAKSVKYTVNFLEAK 229 (348)
T ss_dssp EESCEEEEEEEEECCHHHHHHHHHHHGGGCCSCBTTBCCGGGHHHHHHHHHTSCEEECCCGGG-BCBCCEEEEEETTTCC
T ss_pred EEEecCcEEEEEecchHHhhhhccccCcccccccCcccHHHhhhHHHhhhccCCeEEeECCee-ecCcceEEEEECCcCC
Confidence 99999999999987541 134678 46899999999887766667779998776543 3444456778999998
Q ss_pred CCCce-eeEEEEEEeeeCCCCCCccccccCcceeEEEEEEEEeeeccccCCCCCEEEecCCCCCCCCccceEEecCCcee
Q 006731 490 HDEVD-FTTSVELEPKLGDSTSNSTELRSTSTWCYGIVLWFDAGFTSRFCKEKPVVLSTSPYTPKTHWSQTIITFREPIA 568 (633)
Q Consensus 490 ~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~g~~~g~~~wFd~~f~~~~~~~~~v~lST~P~~~~thW~Q~v~~l~~pi~ 568 (633)
.+++. +..++++++.++ |++|||++|||+.|+. ...+|.|||+|..+.|||+|++|+|++|+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~-------------g~~~g~~~wfd~~~~~---~~~~v~lSt~P~~~~thW~q~~~~l~~p~~ 293 (348)
T 2y1w_A 230 EGDLHRIEIPFKFHMLHS-------------GLVHGLAFWFDVAFIG---SIMTVWLSTAPTEPLTHWYQVRCLFQSPLF 293 (348)
T ss_dssp GGGGSEEEEEEEEEBSSC-------------EEEEEEEEEEEEEEEC---SSCEEEEECCTTSCCCTTCEEEEEEEEEEE
T ss_pred hHHhceeeeeEEEEEccC-------------cEEEEEEEEEEEEEcC---CCCceEEECCCCcCCCeeeeEEEeeCCceE
Confidence 88874 788999999888 9999999999999984 456799999999999999999999999999
Q ss_pred cCCCCeEEEeecccCCCCCCcceeeEEEEEeeCCc-ceEEEEEEEEe
Q 006731 569 LALGNLGADGSAAVGTDACPARRIHLRVSIARGAV-HRSIDISMETA 614 (633)
Q Consensus 569 v~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~i~~~~~ 614 (633)
|++|++|+| ++.+.++.. .|.++|++.+.
T Consensus 294 v~~g~~i~~-----------------~~~~~~~~~~~~~~~~~~~~~ 323 (348)
T 2y1w_A 294 AKAGDTLSG-----------------TCLLIANKRQSYDISIVAQVD 323 (348)
T ss_dssp ECTTCEEEE-----------------EEEEEECTTSSEEEEEEEEET
T ss_pred eCCCCEEEE-----------------EEEEEECCCCCcEEEEEEEEc
Confidence 999999988 556666643 36666666653
No 9
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-41 Score=375.48 Aligned_cols=301 Identities=33% Similarity=0.547 Sum_probs=255.3
Q ss_pred hhhhhcCCCCchhhHHhhcChhhhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Q 006731 259 NESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQ 338 (633)
Q Consensus 259 d~~yf~~Y~~~~~h~~mL~D~~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~ 338 (633)
.+.|+..|+....+..||.|..|++.|.++|.......++++|||||||+|.+++.+++.|+.+|+|||+|+ +++.|++
T Consensus 120 ~~~~~~~y~~~~~~~~~L~d~~~t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~ 198 (480)
T 3b3j_A 120 AVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEV 198 (480)
T ss_dssp CCEEEEGGGCSCHHHHHHHHHHHHHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHH
T ss_pred hhhHHHHHhhhccchhhhcChHhHHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHH
Confidence 346778888877899999999999999999999877778899999999999999999999888999999999 8899999
Q ss_pred HHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEE
Q 006731 339 IAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAI 418 (633)
Q Consensus 339 ~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~l 418 (633)
+++.+++. ++|+++++|+++++ ++ ++||+|||++|++++..+.++..+. .+.++|||||.+
T Consensus 199 ~~~~~gl~-------------~~v~~~~~d~~~~~----~~-~~fD~Ivs~~~~~~~~~e~~~~~l~-~~~~~LkpgG~l 259 (480)
T 3b3j_A 199 LVKSNNLT-------------DRIVVIPGKVEEVS----LP-EQVDIIISEPMGYMLFNERMLESYL-HAKKYLKPSGNM 259 (480)
T ss_dssp HHHHTTCT-------------TTEEEEESCTTTCC----CS-SCEEEEECCCCHHHHTCHHHHHHHH-HGGGGEEEEEEE
T ss_pred HHHHcCCC-------------CcEEEEECchhhCc----cC-CCeEEEEEeCchHhcCcHHHHHHHH-HHHHhcCCCCEE
Confidence 99999997 89999999999876 55 6899999999989888887766555 677999999999
Q ss_pred EeecceeEEEEecCCC------CCccccc--cccCccccccchhhhhhhCCCCeEEEcCCCCccCCCeeEEEeeCCCCCC
Q 006731 419 LPDTATMFVAGFGRGG------TSLPFWE--NVYGFTMSCVGREVVQDAAGIPIVDVVDDHDLVTDSVVLQTFDLATMKH 490 (633)
Q Consensus 419 ip~~~t~~~~~~~~~~------~~~~~w~--~vyG~d~s~~~~~~~~e~~~~p~v~~~~~~~lls~p~~i~~~Dl~~~~~ 490 (633)
+|..+++++.|+.... ....||. .++|++|+.+......+.+..|+++..+.....+.+. ...+||.+...
T Consensus 260 i~~~~~~~~~pi~~~~l~~e~~~~~~~w~~~~~~g~dl~~l~~~~~~~~f~~pvvd~~~~~~~y~~tl-~~~~d~~~~~~ 338 (480)
T 3b3j_A 260 FPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSV-KYTVNFLEAKE 338 (480)
T ss_dssp ESCEEEEEEEEECCHHHHHHHHHHHHHHHSSCBTTBCCGGGHHHHHHHHTTSCEECCCCSTTBCSCCE-EEEEETTTCCT
T ss_pred EEEeceeeeeccCchHHHHHHhhccCccccccCCCcChhhhhhHHHHhccCCcEEEEeecccccchhh-hhhhhhhcCCh
Confidence 9999999999986541 1245674 6899999999877766667779988877666666665 46899999988
Q ss_pred CCce-eeEEEEEEeeeCCCCCCccccccCcceeEEEEEEEEeeeccccCCCCCEEEecCCCCCCCCccceEEecCCceec
Q 006731 491 DEVD-FTTSVELEPKLGDSTSNSTELRSTSTWCYGIVLWFDAGFTSRFCKEKPVVLSTSPYTPKTHWSQTIITFREPIAL 569 (633)
Q Consensus 491 ~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~g~~~g~~~wFd~~f~~~~~~~~~v~lST~P~~~~thW~Q~v~~l~~pi~v 569 (633)
+++. +..+|++++.++ |.+|||++|||+.|+. ...++.|||+|..+.|||+|++|+|++|+.|
T Consensus 339 ~~l~~~~~~~~~~~~~~-------------g~~hg~~~wFd~~~~~---~~~~v~lST~P~~~~thW~q~~~~l~~p~~v 402 (480)
T 3b3j_A 339 GDLHRIEIPFKFHMLHS-------------GLVHGLAFWFDVAFIG---SIMTVWLSTAPTEPLTHWYQVRCLFQSPLFA 402 (480)
T ss_dssp TTTTEEEEEEEEECSSC-------------EEEEEEEEEEEEEEEC---SSCEEESSSCCSSSCCCSEEEEEEEEEEEEE
T ss_pred hhhcceeeeEEEEEccC-------------cEEEEEEEEEEEEEcC---CCCceEEeCCCCcCCCeeeeEEEEeCCceEe
Confidence 8885 678899999888 9999999999999984 4567999999999999999999999999999
Q ss_pred CCCCeEEEeecccCCCCCCcceeeEEEEEeeCC-cceEEEEEEEE
Q 006731 570 ALGNLGADGSAAVGTDACPARRIHLRVSIARGA-VHRSIDISMET 613 (633)
Q Consensus 570 ~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~i~~~~ 613 (633)
++|++|+| ++.+.++. ++|+++|++..
T Consensus 403 ~~g~~i~g-----------------~~~~~~~~~~~~~v~~~~~~ 430 (480)
T 3b3j_A 403 KAGDTLSG-----------------TCLLIANKRQSYDISIVAQV 430 (480)
T ss_dssp CTTCEEEE-----------------EEEEEECTTSSEEEEEEEEE
T ss_pred CCCCEEEE-----------------EEEEEECCCCCcEEEEEEEE
Confidence 99999988 55566653 33655555543
No 10
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=99.96 E-value=1.2e-30 Score=232.18 Aligned_cols=97 Identities=36% Similarity=0.699 Sum_probs=81.4
Q ss_pred CCCCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHH
Q 006731 43 LESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLH 122 (633)
Q Consensus 43 ~~~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~ 122 (633)
+..+++||||+++|+++..+|+||+++|+|||.+++++++||||++||||||||+++ .. ..||.
T Consensus 12 e~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~i~~~~~LDfY~~IKLINyIR~~~-----------~~-----~~~l~ 75 (121)
T 1wir_A 12 GRQHTPCLFCDRLFASAEETFSHCKLEHQFNIDSMVHKHGLEFYGYIKLINFIRLKN-----------PT-----VEYMN 75 (121)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHHHSSCCCHHHHHHHTTCCHHHHHHHHHHHHHTC-----------CC-----HHHHH
T ss_pred CCCceeEecCCCcccCHHHHHHHHHHhcCCCHHHHHHhcCCCceEEEEEEEeeeccc-----------CC-----hhhhc
Confidence 457899999999999999999999999999999999999999999999999999997 22 13553
Q ss_pred HhcccccccCCCCCcCcccccccCcccccccCCCCccc
Q 006731 123 EAYNLKETKLRWDKEKYLKPFMQDDKLLYSFGEDEVDE 160 (633)
Q Consensus 123 ~~~~~~~~~~~w~~d~yl~Pv~e~D~lL~~ld~~~~~~ 160 (633)
.+.....|++|+||+||||||+||+ ++.+++.+
T Consensus 76 ----~~~~~~~Wddd~yL~PvledD~LL~-~dledl~e 108 (121)
T 1wir_A 76 ----SIYNPVPWEKDEYLKPVLEDDLLLQ-FDVEDLYE 108 (121)
T ss_dssp ----SCCSSCTTCCHHHHSCSSSSCHHHH-SCGGGGCC
T ss_pred ----cccCCCCCCCCccccccCCCCceee-eecccccc
Confidence 2222468999999999999999995 55544433
No 11
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.57 E-value=1.4e-14 Score=145.90 Aligned_cols=138 Identities=21% Similarity=0.333 Sum_probs=97.5
Q ss_pred hhhhhhhcCCCCchhhHHhhcChhhhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHH
Q 006731 257 KVNESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVA 336 (633)
Q Consensus 257 ~~d~~yf~~Y~~~~~h~~mL~D~~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A 336 (633)
+.+..||..|......... .+.......+.......++.+|||||||+|.++..+++.|+.+|+|+|+|+.+++.|
T Consensus 8 y~~~~~~~~y~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a 83 (253)
T 3g5l_A 8 YDDKHFFEQYSQMPRSKEG----LKAAGEWHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEA 83 (253)
T ss_dssp -----------------CH----HHHHHHHHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred cccHHHHHHHHHhhccccc----ccchhhHHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHH
Confidence 4455677777654322211 122233445666666678999999999999999999999888999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCc
Q 006731 337 TQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGG 416 (633)
Q Consensus 337 ~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG 416 (633)
+++.. . .+++++++|+.+++ ++.++||+|++..+-+ +-..+..++..+.++|||||
T Consensus 84 ~~~~~----~-------------~~~~~~~~d~~~~~----~~~~~fD~v~~~~~l~---~~~~~~~~l~~~~~~LkpgG 139 (253)
T 3g5l_A 84 KRKTT----S-------------PVVCYEQKAIEDIA----IEPDAYNVVLSSLALH---YIASFDDICKKVYINLKSSG 139 (253)
T ss_dssp HHHCC----C-------------TTEEEEECCGGGCC----CCTTCEEEEEEESCGG---GCSCHHHHHHHHHHHEEEEE
T ss_pred HHhhc----c-------------CCeEEEEcchhhCC----CCCCCeEEEEEchhhh---hhhhHHHHHHHHHHHcCCCc
Confidence 88765 2 67999999999887 7778999999865422 33567899999999999999
Q ss_pred EEEeec
Q 006731 417 AILPDT 422 (633)
Q Consensus 417 ~lip~~ 422 (633)
.++...
T Consensus 140 ~l~~~~ 145 (253)
T 3g5l_A 140 SFIFSV 145 (253)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999753
No 12
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.56 E-value=2.9e-14 Score=144.97 Aligned_cols=115 Identities=20% Similarity=0.317 Sum_probs=98.2
Q ss_pred HHhCCC-CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc
Q 006731 289 ILENPS-LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (633)
Q Consensus 289 I~~~~~-~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g 367 (633)
+..... +.++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.|+++++..++. ++++++++
T Consensus 37 ~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-------------~~v~~~~~ 103 (267)
T 3kkz_A 37 ALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQ-------------NRVTGIVG 103 (267)
T ss_dssp HHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCT-------------TTEEEEEC
T ss_pred HHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCC-------------cCcEEEEc
Confidence 334333 6778999999999999999999997679999999999999999999999987 78999999
Q ss_pred cccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeecce
Q 006731 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (633)
Q Consensus 368 d~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~~t 424 (633)
|+++++ ++.++||+|++..+.+.+ .+..++..+.++|||||.++....+
T Consensus 104 d~~~~~----~~~~~fD~i~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 104 SMDDLP----FRNEELDLIWSEGAIYNI----GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp CTTSCC----CCTTCEEEEEESSCGGGT----CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred ChhhCC----CCCCCEEEEEEcCCceec----CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 999987 777899999997553333 4678999999999999999976543
No 13
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.55 E-value=2.3e-14 Score=146.31 Aligned_cols=107 Identities=22% Similarity=0.328 Sum_probs=90.4
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCC---CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGA---SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa---~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
+.+|.+|||||||+|.+++.+++... .+|+|||+|+.|++.|++++...+.. .+|+++++|+.+
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~-------------~~v~~~~~D~~~ 134 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP-------------TPVDVIEGDIRD 134 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS-------------SCEEEEESCTTT
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC-------------ceEEEeeccccc
Confidence 46889999999999999999998621 28999999999999999999988876 789999999998
Q ss_pred cccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 372 LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++ + +.+|+|++..+.+++ .......++..+.+.|||||.++..
T Consensus 135 ~~----~--~~~d~v~~~~~l~~~-~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 135 IA----I--ENASMVVLNFTLQFL-EPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp CC----C--CSEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cc----c--cccccceeeeeeeec-CchhHhHHHHHHHHHcCCCcEEEEE
Confidence 77 4 569999987654443 3345668999999999999999864
No 14
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.55 E-value=3.8e-14 Score=142.79 Aligned_cols=109 Identities=24% Similarity=0.353 Sum_probs=95.5
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.+.++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.|++++..+++. ++++++++|+++++
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-------------~~~~~~~~d~~~~~ 109 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCA-------------DRVKGITGSMDNLP 109 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCT-------------TTEEEEECCTTSCS
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCC-------------CceEEEECChhhCC
Confidence 56678899999999999999999996569999999999999999999999986 78999999999887
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeecc
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~~ 423 (633)
++.++||+|++..+-+.+ .+..++..+.++|||||.++....
T Consensus 110 ----~~~~~fD~v~~~~~l~~~----~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 110 ----FQNEELDLIWSEGAIYNI----GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp ----SCTTCEEEEEEESCSCCC----CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ----CCCCCEEEEEecChHhhc----CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 777899999997543333 467899999999999999997653
No 15
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.54 E-value=2.3e-14 Score=138.17 Aligned_cols=109 Identities=23% Similarity=0.361 Sum_probs=91.3
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||+|||+|.+++.+++.|+.+|+|+|+|+.+++.|+++++.+++ ++++++++|+.++...
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------~~v~~~~~d~~~~~~~ 108 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL--------------SGATLRRGAVAAVVAA 108 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC--------------SCEEEEESCHHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC--------------CceEEEEccHHHHHhh
Confidence 57899999999999999988888888999999999999999999999887 6799999999887521
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhh--cccCCcEEEeec
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQ--WLKPGGAILPDT 422 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r--~LkpgG~lip~~ 422 (633)
++.++||+|++... +. .....+..++..+.+ +|+|||.++...
T Consensus 109 --~~~~~fD~i~~~~p-~~-~~~~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 109 --GTTSPVDLVLADPP-YN-VDSADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp --CCSSCCSEEEECCC-TT-SCHHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred --ccCCCccEEEECCC-CC-cchhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 33579999999754 21 223567788888888 999999999643
No 16
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.53 E-value=6e-14 Score=134.40 Aligned_cols=108 Identities=19% Similarity=0.180 Sum_probs=87.8
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
+.++.+|||+|||+|.++..+++.+ .+|+|||+|+.|++.|+++++.+++ .++++++++.+.+..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~~-~~v~~vD~s~~~l~~a~~~~~~~~~--------------~~v~~~~~~~~~l~~ 84 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGLS-KKVYAFDVQEQALGKTSQRLSDLGI--------------ENTELILDGHENLDH 84 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHHTC--------------CCEEEEESCGGGGGG
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCC--------------CcEEEEeCcHHHHHh
Confidence 4678999999999999999999985 4999999999999999999998887 689999988887642
Q ss_pred ccccCCCcccEEEEeccccccc-------ChhhHHHHHHHHhhcccCCcEEEee
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLL-------YESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~-------~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++.++||+|++.. +|+.. .......++..+.++|||||.++..
T Consensus 85 ---~~~~~fD~v~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 85 ---YVREPIRAAIFNL-GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp ---TCCSCEEEEEEEE-C-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---hccCCcCEEEEeC-CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 3357899999863 33322 2344567889999999999999854
No 17
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.52 E-value=5.8e-14 Score=141.33 Aligned_cols=117 Identities=16% Similarity=0.155 Sum_probs=96.5
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
....+.....+.++.+|||||||+|.++..+++....+|+|+|+|+.+++.|+++++.+++. +++++
T Consensus 24 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-------------~~v~~ 90 (256)
T 1nkv_A 24 KYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVS-------------ERVHF 90 (256)
T ss_dssp HHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCT-------------TTEEE
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCC-------------cceEE
Confidence 34445555567788999999999999999999873338999999999999999999998886 78999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+++|+++++ + .++||+|++....+ +-..+..++..+.++|||||.++...
T Consensus 91 ~~~d~~~~~----~-~~~fD~V~~~~~~~---~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 91 IHNDAAGYV----A-NEKCDVAACVGATW---IAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EESCCTTCC----C-SSCEEEEEEESCGG---GTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred EECChHhCC----c-CCCCCEEEECCChH---hcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 999999887 5 68899999854322 22356789999999999999999654
No 18
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.52 E-value=7.1e-14 Score=137.54 Aligned_cols=113 Identities=18% Similarity=0.170 Sum_probs=90.8
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
.++.+|||||||+|.++..+++.+. .+|+|+|+|+.+++.|++++..+++.. ....+++++++|+...+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~---------~~~~~v~~~~~d~~~~~- 97 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPR---------NQWERLQLIQGALTYQD- 97 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCH---------HHHTTEEEEECCTTSCC-
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCc---------ccCcceEEEeCCccccc-
Confidence 4678999999999999999999853 699999999999999999998887740 00017999999997766
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.+.++||+|++..+-+.+ ....+..++..+.++|||||.++...
T Consensus 98 ---~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 98 ---KRFHGYDAATVIEVIEHL-DLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp ---GGGCSCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ---ccCCCcCEEeeHHHHHcC-CHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 556799999986543333 44456889999999999999877443
No 19
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.51 E-value=1e-13 Score=140.97 Aligned_cols=118 Identities=19% Similarity=0.224 Sum_probs=99.0
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
..+.+.....+.++.+|||||||+|.++..+++....+|+|+|+|+.+++.|++++..+++. +++++
T Consensus 49 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-------------~~~~~ 115 (273)
T 3bus_A 49 LTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLA-------------NRVTF 115 (273)
T ss_dssp HHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCT-------------TTEEE
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCC-------------cceEE
Confidence 44555555566788999999999999999999863349999999999999999999998886 78999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+.+|+.+++ ++.++||+|++..+ +.+-.....++..+.++|||||.++...
T Consensus 116 ~~~d~~~~~----~~~~~fD~v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 116 SYADAMDLP----FEDASFDAVWALES---LHHMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EECCTTSCC----SCTTCEEEEEEESC---TTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EECccccCC----CCCCCccEEEEech---hhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 999999987 77789999998654 2333456889999999999999999654
No 20
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.51 E-value=1.9e-14 Score=140.93 Aligned_cols=118 Identities=15% Similarity=0.081 Sum_probs=86.1
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.+.++.+|||+|||+|.++..+++.|+ +|+|||+|+.|++.|+++......... ..+.......+++++++|+.+++
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~d~~~l~ 95 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITS--QGDFKVYAAPGIEIWCGDFFALT 95 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEE--ETTEEEEECSSSEEEEECCSSST
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCccccc--ccccccccCCccEEEECccccCC
Confidence 345789999999999999999999987 999999999999999987643100000 00000000157999999999887
Q ss_pred cccccCC-CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 374 ESMQIQP-HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 374 ~~~~l~~-~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
++. ++||+|++...-+. +.......++..+.++|||||.++
T Consensus 96 ----~~~~~~fD~v~~~~~l~~-l~~~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 96 ----ARDIGHCAAFYDRAAMIA-LPADMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp ----HHHHHSEEEEEEESCGGG-SCHHHHHHHHHHHHHHSCSEEEEE
T ss_pred ----cccCCCEEEEEECcchhh-CCHHHHHHHHHHHHHHcCCCcEEE
Confidence 443 68999998543222 345566789999999999999844
No 21
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.51 E-value=6.4e-14 Score=137.90 Aligned_cols=107 Identities=17% Similarity=0.164 Sum_probs=89.3
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC----cEEEEEcccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG----KMEVVQGMVE 370 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~----~I~vi~gd~e 370 (633)
.++.+|||||||+|.++..+++.+. .+|+|||+|+.+++.|++++..+++. . +++++++|+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-------------~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLP-------------EMQRKRISLFQSSLV 94 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSC-------------HHHHTTEEEEECCSS
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccc-------------cccCcceEEEeCccc
Confidence 4678999999999999999999864 69999999999999999999877763 3 8999999997
Q ss_pred ccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 371 ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 371 ~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
..+ .+.++||+|++..+-+.+ ....+..++..+.++|||||.++.
T Consensus 95 ~~~----~~~~~fD~V~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~~i~ 139 (219)
T 3jwg_A 95 YRD----KRFSGYDAATVIEVIEHL-DENRLQAFEKVLFEFTRPQTVIVS 139 (219)
T ss_dssp SCC----GGGTTCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred ccc----cccCCCCEEEEHHHHHhC-CHHHHHHHHHHHHHhhCCCEEEEE
Confidence 776 556899999986543333 334567899999999999997774
No 22
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.51 E-value=1.4e-13 Score=143.61 Aligned_cols=113 Identities=17% Similarity=0.206 Sum_probs=97.7
Q ss_pred HHHHhCCC-CCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 287 QAILENPS-LMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 287 ~aI~~~~~-~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
+.+..... +.++.+|||||||+|.++..+++. |+ +|+|||+|+.+++.|+++++.+++. +++++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~-------------~~v~~ 171 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRID-------------DHVRS 171 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCT-------------TTEEE
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCC-------------CceEE
Confidence 44555555 678899999999999999999998 75 8999999999999999999999986 79999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+.+|+++++ ++.++||+|++..+.+.+ .+..++..+.++|||||.++..
T Consensus 172 ~~~d~~~~~----~~~~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~~~ 220 (312)
T 3vc1_A 172 RVCNMLDTP----FDKGAVTASWNNESTMYV----DLHDLFSEHSRFLKVGGRYVTI 220 (312)
T ss_dssp EECCTTSCC----CCTTCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECChhcCC----CCCCCEeEEEECCchhhC----CHHHHHHHHHHHcCCCcEEEEE
Confidence 999999887 777899999996543333 2788999999999999999954
No 23
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.50 E-value=2.6e-13 Score=140.66 Aligned_cols=117 Identities=24% Similarity=0.179 Sum_probs=97.3
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~ 363 (633)
..+.+.....+.++.+|||||||+|.++..+++. |+ +|+|+|+|+.+++.|++++..+++. ++++
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~-------------~~v~ 125 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSP-------------RRKE 125 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCS-------------SCEE
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCC-------------CceE
Confidence 3344555666788999999999999999999998 84 9999999999999999999999986 7999
Q ss_pred EEEccccccccccccCCCcccEEEEeccccccc------ChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLL------YESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~------~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++.+|+.++ .++||+|++..+.+.+. ....+..++..+.++|||||.++...
T Consensus 126 ~~~~d~~~~-------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 126 VRIQGWEEF-------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp EEECCGGGC-------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred EEECCHHHc-------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999999765 37899999975433332 22566889999999999999999654
No 24
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.50 E-value=1e-13 Score=136.07 Aligned_cols=116 Identities=16% Similarity=0.165 Sum_probs=95.3
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEE
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~ 363 (633)
.+...+.......++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++..+ .+++
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~----------------~~~~ 100 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRW----------------SHIS 100 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTC----------------SSEE
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccC----------------CCeE
Confidence 3445555445566789999999999999999999986 9999999999999999887642 5799
Q ss_pred EEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++++|+.++. +.++||+|++..+.+.+.....+..++..+.++|||||.++..
T Consensus 101 ~~~~d~~~~~-----~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 101 WAATDILQFS-----TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp EEECCTTTCC-----CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEcchhhCC-----CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 9999999886 3589999999765555555556678899999999999999954
No 25
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.50 E-value=7.1e-14 Score=141.40 Aligned_cols=106 Identities=22% Similarity=0.250 Sum_probs=91.4
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++..+++ .+++++.+|+++++
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~--------------~~v~~~~~d~~~l~ 98 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGH--------------QQVEYVQGDAEQMP 98 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTC--------------CSEEEEECCC-CCC
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCC--------------CceEEEEecHHhCC
Confidence 345789999999999999999999876 999999999999999999988887 67999999999988
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+++++||+|++...-+ +-..+..++..+.++|||||.++..
T Consensus 99 ----~~~~~fD~V~~~~~l~---~~~d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 99 ----FTDERFHIVTCRIAAH---HFPNPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp ----SCTTCEEEEEEESCGG---GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----CCCCCEEEEEEhhhhH---hcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 7778999999864422 3346678999999999999999864
No 26
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.49 E-value=2.1e-13 Score=133.73 Aligned_cols=108 Identities=20% Similarity=0.232 Sum_probs=89.2
Q ss_pred HHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
+.......++.+|||||||+|.+++.+++.+. +|+|||+|+.+++.|+++++.+++. ++++++++|
T Consensus 47 ~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~-~v~~vD~s~~~~~~a~~~~~~~g~~-------------~~v~~~~~d 112 (204)
T 3njr_A 47 TLAALAPRRGELLWDIGGGSGSVSVEWCLAGG-RAITIEPRADRIENIQKNIDTYGLS-------------PRMRAVQGT 112 (204)
T ss_dssp HHHHHCCCTTCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCT-------------TTEEEEESC
T ss_pred HHHhcCCCCCCEEEEecCCCCHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCC-------------CCEEEEeCc
Confidence 34444567889999999999999999999954 9999999999999999999999985 599999999
Q ss_pred ccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 369 ~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+.+.. ....+||+|++.. .+ ... ++..+.++|||||.++...
T Consensus 113 ~~~~~----~~~~~~D~v~~~~---~~----~~~-~l~~~~~~LkpgG~lv~~~ 154 (204)
T 3njr_A 113 APAAL----ADLPLPEAVFIGG---GG----SQA-LYDRLWEWLAPGTRIVANA 154 (204)
T ss_dssp TTGGG----TTSCCCSEEEECS---CC----CHH-HHHHHHHHSCTTCEEEEEE
T ss_pred hhhhc----ccCCCCCEEEECC---cc----cHH-HHHHHHHhcCCCcEEEEEe
Confidence 98843 2235799999754 12 345 8899999999999999654
No 27
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.49 E-value=1.7e-13 Score=135.07 Aligned_cols=119 Identities=23% Similarity=0.328 Sum_probs=98.3
Q ss_pred hhhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 006731 280 VRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNA 359 (633)
Q Consensus 280 ~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~ 359 (633)
.+.+.+.+.+..... ++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|++++..++
T Consensus 23 ~~~~~~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--------------- 84 (227)
T 1ve3_A 23 SRIETLEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE--------------- 84 (227)
T ss_dssp HHHHHHHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------
T ss_pred HHHHHHHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC---------------
Confidence 345667777776543 478999999999999999999987 99999999999999999988765
Q ss_pred CcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 360 GKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 360 ~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.+++++++|+.+++ ++.++||+|++..+.+ +.+...+..++..+.++|+|||.++..
T Consensus 85 ~~~~~~~~d~~~~~----~~~~~~D~v~~~~~~~-~~~~~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 85 SNVEFIVGDARKLS----FEDKTFDYVIFIDSIV-HFEPLELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp CCCEEEECCTTSCC----SCTTCEEEEEEESCGG-GCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEECchhcCC----CCCCcEEEEEEcCchH-hCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 46899999999877 6678999999875422 334456788999999999999999854
No 28
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.49 E-value=2.1e-14 Score=147.84 Aligned_cols=133 Identities=22% Similarity=0.217 Sum_probs=100.7
Q ss_pred ChhhhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 006731 278 DKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNIN 357 (633)
Q Consensus 278 D~~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~ 357 (633)
...|+..+.+.|.......++.+|||||||+|.++..+++.|+ +|+|+|+|+.|++.|++++...+.. .
T Consensus 38 ~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~----------~ 106 (293)
T 3thr_A 38 TRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKE----------P 106 (293)
T ss_dssp CSCBCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTS----------H
T ss_pred CcchHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccc----------c
Confidence 4556677777777665556789999999999999999999988 9999999999999999887544321 0
Q ss_pred CCCcEEEEEccccccccccccCCCcccEEEEe-cccccccC----hhhHHHHHHHHhhcccCCcEEEeec
Q 006731 358 NAGKMEVVQGMVEELGESMQIQPHSVDVLVSE-WMGYCLLY----ESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 358 ~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse-~mg~~L~~----e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
...++.++.+++.+++... ++.++||+|++. .+-+.+.. ...+..++..+.++|||||.++...
T Consensus 107 ~~~~~~~~~~d~~~~~~~~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 107 AFDKWVIEEANWLTLDKDV-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp HHHTCEEEECCGGGHHHHS-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccceeeEeecChhhCcccc-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 0146889999998765221 346899999985 22222222 3458899999999999999999654
No 29
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.48 E-value=1.2e-13 Score=134.99 Aligned_cols=113 Identities=24% Similarity=0.361 Sum_probs=93.6
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g 367 (633)
.+.......++ +|||||||+|.++..+++....+|+|+|+|+.+++.|+++++.+++. .+++++++
T Consensus 35 ~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-------------~~~~~~~~ 100 (219)
T 3dlc_A 35 NIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLN-------------DRIQIVQG 100 (219)
T ss_dssp HHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCT-------------TTEEEEEC
T ss_pred HHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhcccc-------------CceEEEEc
Confidence 33333333444 99999999999999999983349999999999999999999998886 78999999
Q ss_pred cccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 368 d~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
|+.+++ ++.++||+|++..+-+.+ ..+..++..+.++|+|||.++..
T Consensus 101 d~~~~~----~~~~~~D~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 101 DVHNIP----IEDNYADLIVSRGSVFFW---EDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp BTTBCS----SCTTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHCC----CCcccccEEEECchHhhc---cCHHHHHHHHHHhCCCCCEEEEE
Confidence 999988 777899999986543322 56788999999999999999864
No 30
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.48 E-value=3.4e-13 Score=135.53 Aligned_cols=113 Identities=29% Similarity=0.448 Sum_probs=91.8
Q ss_pred HHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
+.......++.+|||||||+|.++..+++.|. +|+|+|+|+.|++.|++++..++. +++++++|
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~---------------~v~~~~~d 96 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNL---------------KIEFLQGD 96 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC---------------CCEEEESC
T ss_pred HHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCC---------------ceEEEECC
Confidence 33333445678999999999999999999987 899999999999999999887663 58999999
Q ss_pred ccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 369 ~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+.+++ ++ ++||+|++............+..++..+.++|+|||.++.+.
T Consensus 97 ~~~~~----~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 97 VLEIA----FK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GGGCC----CC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcc----cC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 99887 54 789999974322223345678889999999999999998654
No 31
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.48 E-value=7e-14 Score=136.32 Aligned_cols=117 Identities=23% Similarity=0.256 Sum_probs=93.9
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEE
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~ 363 (633)
.+.+.|... +.++.+|||||||+|.++..+++.|..+|+|+|+|+.+++.|+++... . .+++
T Consensus 31 ~~~~~l~~~--~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~--------------~~i~ 92 (215)
T 2pxx_A 31 SFRALLEPE--LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--V--------------PQLR 92 (215)
T ss_dssp HHHHHHGGG--CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--C--------------TTCE
T ss_pred HHHHHHHHh--cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--C--------------CCcE
Confidence 355556554 357889999999999999999999877999999999999999988753 2 5799
Q ss_pred EEEccccccccccccCCCcccEEEEeccccccc------------ChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLL------------YESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~------------~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++++|+.+++ ++.++||+|++..+...+. +......++..+.++|||||.++...
T Consensus 93 ~~~~d~~~~~----~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 93 WETMDVRKLD----FPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp EEECCTTSCC----SCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcchhcCC----CCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 9999999887 7778999999865332222 23456889999999999999998543
No 32
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.48 E-value=7.9e-14 Score=132.59 Aligned_cols=108 Identities=18% Similarity=0.188 Sum_probs=87.9
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
..++++|||+|||+|.++..+++.|..+|+|+|+|+.+++.|+++++.+++. ++++++.+|+.+...
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-------------~~~~~~~~d~~~~~~ 95 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAE-------------NRFTLLKMEAERAID 95 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCG-------------GGEEEECSCHHHHHH
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CceEEEECcHHHhHH
Confidence 4578899999999999999999998779999999999999999999999886 789999999988421
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHh--hcccCCcEEEeec
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARD--QWLKPGGAILPDT 422 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~--r~LkpgG~lip~~ 422 (633)
...++||+|++... + +......++..+. ++|+|||.++...
T Consensus 96 ---~~~~~fD~i~~~~~-~---~~~~~~~~~~~l~~~~~L~~gG~l~~~~ 138 (177)
T 2esr_A 96 ---CLTGRFDLVFLDPP-Y---AKETIVATIEALAAKNLLSEQVMVVCET 138 (177)
T ss_dssp ---HBCSCEEEEEECCS-S---HHHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred ---hhcCCCCEEEECCC-C---CcchHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 22467999998753 1 1234455666665 9999999998643
No 33
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.48 E-value=1.5e-13 Score=141.81 Aligned_cols=108 Identities=18% Similarity=0.164 Sum_probs=94.0
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
...++.+|||||||+|.++..+++. |+ +|+|+|+|+.+++.|+++++..++. .+++++++|+.++
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~-------------~~~~~~~~d~~~~ 144 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLA-------------DNITVKYGSFLEI 144 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCT-------------TTEEEEECCTTSC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCC-------------cceEEEEcCcccC
Confidence 5678899999999999999999987 76 9999999999999999999888886 7899999999998
Q ss_pred ccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 373 GESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+ ++.++||+|++..+.+.+ ..+..++..+.++|||||.++...
T Consensus 145 ~----~~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 145 P----CEDNSYDFIWSQDAFLHS---PDKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp S----SCTTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C----CCCCCEeEEEecchhhhc---CCHHHHHHHHHHHcCCCeEEEEEE
Confidence 8 777899999986543322 347889999999999999999654
No 34
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.48 E-value=2e-13 Score=140.29 Aligned_cols=111 Identities=22% Similarity=0.223 Sum_probs=94.9
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
+.++.+|||||||+|.++..+++.|..+|+|+|+|+.+++.|++++...++. .+++++++|+.+++
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~~- 127 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRR-------------FKVFFRAQDSYGRH- 127 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCS-------------SEEEEEESCTTTSC-
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCC-------------ccEEEEECCccccc-
Confidence 4578999999999999999999988779999999999999999999988776 78999999999886
Q ss_pred cccc-CCCcccEEEEecc-cccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 375 SMQI-QPHSVDVLVSEWM-GYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 375 ~~~l-~~~~~DvIvse~m-g~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+ +.++||+|++..+ .+.+.+...+..++..+.++|||||.++...
T Consensus 128 ---~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 128 ---MDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp ---CCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---cCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 5 4689999998643 2222456678899999999999999999654
No 35
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.48 E-value=3.5e-13 Score=131.34 Aligned_cols=111 Identities=23% Similarity=0.232 Sum_probs=92.2
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
..+.......++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.|+++++.+++ ++++++
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~~v~~~ 95 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA--------------RNVTLV 95 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC--------------TTEEEE
T ss_pred HHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC--------------CcEEEE
Confidence 344455567788999999999999999999986 46999999999999999999998887 689999
Q ss_pred EccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 366 ~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++|+.+.. ...++||+|++.... ..+..++..+.++|+|||.++..
T Consensus 96 ~~d~~~~~----~~~~~~D~i~~~~~~------~~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 96 EAFAPEGL----DDLPDPDRVFIGGSG------GMLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp ECCTTTTC----TTSCCCSEEEESCCT------TCHHHHHHHHHHHCCTTCEEEEE
T ss_pred eCChhhhh----hcCCCCCEEEECCCC------cCHHHHHHHHHHhcCCCeEEEEE
Confidence 99997654 233689999985432 15678999999999999999954
No 36
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.47 E-value=3.6e-13 Score=129.80 Aligned_cols=106 Identities=22% Similarity=0.296 Sum_probs=90.6
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
...++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++..+++ .+++++.+|+.+++
T Consensus 29 ~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--------------~~~~~~~~d~~~~~ 93 (199)
T 2xvm_A 29 KVVKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENL--------------DNLHTRVVDLNNLT 93 (199)
T ss_dssp TTSCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC--------------TTEEEEECCGGGCC
T ss_pred hccCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCC--------------CCcEEEEcchhhCC
Confidence 345778999999999999999999977 999999999999999999988877 46999999999887
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+ .++||+|++..+.+.+ ....+..++..+.++|+|||.++.
T Consensus 94 ----~-~~~~D~v~~~~~l~~~-~~~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 94 ----F-DRQYDFILSTVVLMFL-EAKTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp ----C-CCCEEEEEEESCGGGS-CGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred ----C-CCCceEEEEcchhhhC-CHHHHHHHHHHHHHhcCCCeEEEE
Confidence 5 6889999987543333 334678899999999999999774
No 37
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.47 E-value=1.4e-13 Score=139.65 Aligned_cols=112 Identities=15% Similarity=-0.023 Sum_probs=85.8
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHh----------CCCCCCCCCCCCCCCCCCcEEEE
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKD----------NDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~----------ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
.++.+|||+|||+|.++..+|+.|. +|+|||+|+.|++.|++.... +++. .......+|+++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~~ 138 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAK-------VFKSSSGSISLY 138 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCE-------EEEETTSSEEEE
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhccccccccccccccccc-------ccccCCCceEEE
Confidence 4778999999999999999999998 999999999999999776431 0000 000011579999
Q ss_pred EccccccccccccCC-CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 QGMVEELGESMQIQP-HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 ~gd~e~l~~~~~l~~-~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
++|+.+++ .+. ++||+|++...-+.+ .......++..+.++|||||+++.
T Consensus 139 ~~D~~~l~----~~~~~~FD~V~~~~~l~~l-~~~~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 139 CCSIFDLP----RANIGKFDRIWDRGALVAI-NPGDHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp ESCTTTGG----GGCCCCEEEEEESSSTTTS-CGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred ECccccCC----cccCCCEEEEEEhhhhhhC-CHHHHHHHHHHHHHHcCCCeEEEE
Confidence 99999987 443 789999985432323 455677899999999999999863
No 38
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.47 E-value=4.7e-13 Score=137.33 Aligned_cols=106 Identities=23% Similarity=0.257 Sum_probs=90.6
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
++.+|||||||+|.++..+++.|+ +|+|||+|+.+++.|++++..+++. .+++++++|+.+++.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~~~-- 131 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVS-------------DNMQFIHCAAQDVAS-- 131 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCG-------------GGEEEEESCGGGTGG--
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCC-------------cceEEEEcCHHHhhh--
Confidence 478999999999999999999977 9999999999999999999998886 789999999998762
Q ss_pred ccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 377 ~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++.++||+|++..+-+ +...+..++..+.++|||||.++...
T Consensus 132 -~~~~~fD~v~~~~~l~---~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 132 -HLETPVDLILFHAVLE---WVADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp -GCSSCEEEEEEESCGG---GCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -hcCCCceEEEECchhh---cccCHHHHHHHHHHHcCCCeEEEEEE
Confidence 4568999999865433 33456889999999999999998653
No 39
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.46 E-value=1.4e-13 Score=137.51 Aligned_cols=108 Identities=17% Similarity=0.203 Sum_probs=88.0
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc--c
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL--G 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l--~ 373 (633)
.++.+|||||||+|.++..+++.+..+|+|||+|+.|++.|+++.+.++ .++++++++++++ +
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~---------------~~v~~~~~d~~~~~~~ 123 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT---------------HKVIPLKGLWEDVAPT 123 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS---------------SEEEEEESCHHHHGGG
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC---------------CCeEEEecCHHHhhcc
Confidence 4678999999999999999988777799999999999999999887655 5699999999988 5
Q ss_pred cccccCCCcccEEEEe-cc-cccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 374 ESMQIQPHSVDVLVSE-WM-GYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse-~m-g~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++.++||+|++. +. .....+......++..+.++|||||.++...
T Consensus 124 ----~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 124 ----LPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ----SCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ----cCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 677899999983 21 1112233445678999999999999998543
No 40
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.46 E-value=1.4e-13 Score=137.16 Aligned_cols=105 Identities=21% Similarity=0.247 Sum_probs=89.1
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++..++. +++++++|+.+++
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~---------------~~~~~~~d~~~~~-- 97 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGL---------------KPRLACQDISNLN-- 97 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTC---------------CCEEECCCGGGCC--
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCC---------------CeEEEecccccCC--
Confidence 3778999999999999999999986 899999999999999999877653 5899999999887
Q ss_pred cccCCCcccEEEEec-ccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 376 MQIQPHSVDVLVSEW-MGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 376 ~~l~~~~~DvIvse~-mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++ ++||+|++.. +-+.+.....+..++..+.++|+|||.++.+
T Consensus 98 --~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 98 --IN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp --CS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred --cc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 65 8899999854 4333444467889999999999999999854
No 41
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.46 E-value=4.4e-13 Score=133.48 Aligned_cols=118 Identities=25% Similarity=0.347 Sum_probs=94.7
Q ss_pred hhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 006731 281 RTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG 360 (633)
Q Consensus 281 R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~ 360 (633)
....+.+.+... +.++.+|||||||+|.++..+++. .+|+|+|+|+.+++.|++++..++ .
T Consensus 19 ~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~---------------~ 79 (243)
T 3d2l_A 19 PYPEWVAWVLEQ--VEPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN---------------R 79 (243)
T ss_dssp CHHHHHHHHHHH--SCTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT---------------C
T ss_pred cHHHHHHHHHHH--cCCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC---------------C
Confidence 344556666654 345789999999999999999887 599999999999999999988765 4
Q ss_pred cEEEEEccccccccccccCCCcccEEEEec-ccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 361 KMEVVQGMVEELGESMQIQPHSVDVLVSEW-MGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 361 ~I~vi~gd~e~l~~~~~l~~~~~DvIvse~-mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+++++++|+.+++ ++ ++||+|++.. ..+.+.....+..++..+.++|+|||.++.+.
T Consensus 80 ~~~~~~~d~~~~~----~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 80 HVDFWVQDMRELE----LP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp CCEEEECCGGGCC----CS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEEcChhhcC----CC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 5899999999887 55 7899999853 32334455677889999999999999998643
No 42
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.46 E-value=1.1e-13 Score=132.17 Aligned_cols=111 Identities=20% Similarity=0.182 Sum_probs=88.0
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
..++.+|||+|||+|.+++.+++.++.+|+|+|+++.+++.|++++..+++. ++++++++|+.+...
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-------------~~~~~~~~d~~~~~~ 108 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEP-------------EKFEVRKMDANRALE 108 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCG-------------GGEEEEESCHHHHHH
T ss_pred hcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCC-------------cceEEEECcHHHHHH
Confidence 3578999999999999999999888789999999999999999999998876 789999999987541
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHH--hhcccCCcEEEeec
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFAR--DQWLKPGGAILPDT 422 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~--~r~LkpgG~lip~~ 422 (633)
......++||+|++... |. ......++..+ .++|+|||.++...
T Consensus 109 ~~~~~~~~fD~i~~~~~-~~---~~~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 109 QFYEEKLQFDLVLLDPP-YA---KQEIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp HHHHTTCCEEEEEECCC-GG---GCCHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred HHHhcCCCCCEEEECCC-CC---chhHHHHHHHHHHhcccCCCCEEEEEe
Confidence 11112578999999754 22 12334555555 88999999998653
No 43
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.46 E-value=3.7e-13 Score=135.11 Aligned_cols=117 Identities=15% Similarity=0.172 Sum_probs=95.2
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
+...+.......++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.|++++..+ .++++
T Consensus 81 ~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------~~~~~ 144 (254)
T 1xtp_A 81 GSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM----------------PVGKF 144 (254)
T ss_dssp HHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS----------------SEEEE
T ss_pred HHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC----------------CceEE
Confidence 33445555556678999999999999999999887778999999999999999876542 46999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+++++.+++ ++.++||+|++..+.+.+ ....+..++..+.++|||||.++...
T Consensus 145 ~~~d~~~~~----~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 145 ILASMETAT----LPPNTYDLIVIQWTAIYL-TDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EESCGGGCC----CCSSCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEccHHHCC----CCCCCeEEEEEcchhhhC-CHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 999999887 777899999986543332 22467889999999999999999654
No 44
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.46 E-value=7.7e-14 Score=136.43 Aligned_cols=110 Identities=18% Similarity=0.207 Sum_probs=88.8
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
++.+|||+|||+|.+++.+++.|+.+|+|||+|+.|++.|+++++.+++. .++++++++|+.++...
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~------------~~~v~~~~~d~~~~~~~- 119 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCS------------SEQAEVINQSSLDFLKQ- 119 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC------------TTTEEEECSCHHHHTTS-
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCC------------ccceEEEECCHHHHHHh-
Confidence 67899999999999999988888889999999999999999999988862 03799999999886411
Q ss_pred ccCCCc-ccEEEEecccccccChhhHHHHHHHH--hhcccCCcEEEeecce
Q 006731 377 QIQPHS-VDVLVSEWMGYCLLYESMLSSVLFAR--DQWLKPGGAILPDTAT 424 (633)
Q Consensus 377 ~l~~~~-~DvIvse~mg~~L~~e~~l~~vl~a~--~r~LkpgG~lip~~~t 424 (633)
++.++ ||+|++... |. ......++..+ .++|+|||.++.....
T Consensus 120 -~~~~~~fD~I~~~~~-~~---~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 120 -PQNQPHFDVVFLDPP-FH---FNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp -CCSSCCEEEEEECCC-SS---SCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred -hccCCCCCEEEECCC-CC---CccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 22468 999998764 22 34567777777 6789999999966543
No 45
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.46 E-value=4e-13 Score=134.38 Aligned_cols=107 Identities=19% Similarity=0.204 Sum_probs=88.9
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.|++++..++. .+++++.+++.+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~~~~~~~~d~~~~~--- 141 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK--------------RVRNYFCCGLQDFT--- 141 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG--------------GEEEEEECCGGGCC---
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC--------------ceEEEEEcChhhcC---
Confidence 5889999999999999999988767999999999999999998876542 67999999999887
Q ss_pred ccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 377 ~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++.++||+|++..+-+.+ ....+..++..+.++|||||.++...
T Consensus 142 -~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 142 -PEPDSYDVIWIQWVIGHL-TDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp -CCSSCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCCCCEEEEEEcchhhhC-CHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 666789999987543322 22335689999999999999999643
No 46
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.45 E-value=3.4e-13 Score=137.52 Aligned_cols=118 Identities=19% Similarity=0.275 Sum_probs=99.4
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcE
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I 362 (633)
.+...+.......++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.|++++..+++ .++
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~~~ 89 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI--------------KNV 89 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC--------------CSE
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CCc
Confidence 455566666666789999999999999999999984 35999999999999999999998887 579
Q ss_pred EEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 363 ~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+++.+|+.+++ ++.++||+|++..+.+ +-..+..++..+.++|||||.++...
T Consensus 90 ~~~~~d~~~~~----~~~~~fD~v~~~~~l~---~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 90 KFLQANIFSLP----FEDSSFDHIFVCFVLE---HLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EEEECCGGGCC----SCTTCEEEEEEESCGG---GCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcccccCC----CCCCCeeEEEEechhh---hcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 99999999987 7778999999865433 33456789999999999999998654
No 47
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.45 E-value=2e-13 Score=136.73 Aligned_cols=106 Identities=24% Similarity=0.294 Sum_probs=92.1
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.+.++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|++++..+++ .+++++++++++++
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--------------~~v~~~~~d~~~~~ 82 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGV--------------ENVRFQQGTAESLP 82 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTC--------------CSEEEEECBTTBCC
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCC--------------CCeEEEecccccCC
Confidence 457889999999999999999999886 999999999999999999988887 67999999999887
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++.++||+|++..+.+ +-..+..++..+.++|||||.++..
T Consensus 83 ----~~~~~fD~v~~~~~l~---~~~~~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 83 ----FPDDSFDIITCRYAAH---HFSDVRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp ----SCTTCEEEEEEESCGG---GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----CCCCcEEEEEECCchh---hccCHHHHHHHHHHHcCCCcEEEEE
Confidence 7778999999864322 2245788999999999999999854
No 48
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.45 E-value=1.6e-13 Score=137.77 Aligned_cols=109 Identities=17% Similarity=0.191 Sum_probs=90.5
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.+|.+|||||||+|+.+..+++.+..+|++||+|+.+++.|+++.+..+ .+++++.++++++...
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~---------------~~~~~~~~~a~~~~~~ 123 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT---------------HKVIPLKGLWEDVAPT 123 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS---------------SEEEEEESCHHHHGGG
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC---------------CceEEEeehHHhhccc
Confidence 5789999999999999999998866699999999999999999988765 5689999999876422
Q ss_pred cccCCCcccEEEEecc--cccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 376 MQIQPHSVDVLVSEWM--GYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 376 ~~l~~~~~DvIvse~m--g~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++.++||.|+...+ .+.+.+......++..+.|+|||||++++.
T Consensus 124 --~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 124 --LPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp --SCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred --ccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 56788999987643 233445566788999999999999999853
No 49
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.45 E-value=5.1e-13 Score=132.02 Aligned_cols=112 Identities=22% Similarity=0.267 Sum_probs=93.4
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|++++..+++. .....+++++.+++..++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~---------~~~~~~~~~~~~d~~~~~-- 96 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLN---------QKTGGKAEFKVENASSLS-- 96 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCC---------SSSSCEEEEEECCTTSCC--
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCc---------cccCcceEEEEecccccC--
Confidence 4788999999999999999999987 9999999999999999998877662 112257999999999887
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++.++||+|++..+.+.+........++..+.++|+|||.++..
T Consensus 97 --~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (235)
T 3sm3_A 97 --FHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLV 140 (235)
T ss_dssp --SCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 77789999999765444444444558999999999999999854
No 50
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.45 E-value=1e-12 Score=134.84 Aligned_cols=116 Identities=20% Similarity=0.230 Sum_probs=95.5
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQ-AGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~-aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~ 363 (633)
..+.+.....+.++.+|||||||+|.++..+++ .|+ +|+|+|+|+.+++.|++++...++. .+++
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~-------------~~~~ 117 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENL-------------RSKR 117 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCC-------------SCEE
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCC-------------CCeE
Confidence 445566666677889999999999999999984 477 9999999999999999999988876 7899
Q ss_pred EEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++.+|+.++ + ++||+|++..+-+.+ ....+..++..+.++|||||.++...
T Consensus 118 ~~~~d~~~~------~-~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 118 VLLAGWEQF------D-EPVDRIVSIGAFEHF-GHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EEESCGGGC------C-CCCSEEEEESCGGGT-CTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEECChhhC------C-CCeeEEEEeCchhhc-ChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999754 3 789999986543322 22467889999999999999999654
No 51
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.44 E-value=1.4e-13 Score=134.64 Aligned_cols=105 Identities=15% Similarity=0.168 Sum_probs=86.0
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
++.+|||+|||+|.+++.+++.|+.+|+|||+|+.|++.|+++++.+++ .+++++++|+.+...
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~--------------~~v~~~~~D~~~~~~-- 117 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA--------------GNARVVNSNAMSFLA-- 117 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC--------------CSEEEECSCHHHHHS--
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CcEEEEECCHHHHHh--
Confidence 6789999999999999998888888999999999999999999999887 679999999988431
Q ss_pred ccCCCcccEEEEecccccccChhhHHHHHHHHh--hcccCCcEEEeec
Q 006731 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARD--QWLKPGGAILPDT 422 (633)
Q Consensus 377 ~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~--r~LkpgG~lip~~ 422 (633)
.+.++||+|++.+. |. ......++..+. ++|+|||.++.+.
T Consensus 118 -~~~~~fD~V~~~~p-~~---~~~~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 118 -QKGTPHNIVFVDPP-FR---RGLLEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp -SCCCCEEEEEECCS-SS---TTTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred -hcCCCCCEEEECCC-CC---CCcHHHHHHHHHhcCccCCCcEEEEEE
Confidence 34578999998764 22 234556666664 4699999998654
No 52
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.44 E-value=3e-13 Score=134.74 Aligned_cols=111 Identities=28% Similarity=0.394 Sum_probs=90.5
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g 367 (633)
.+.......++.+|||||||+|.++..+++.|..+|+|+|+|+.+++.|+++... .+++++++
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----------------~~~~~~~~ 96 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD-----------------TGITYERA 96 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS-----------------SSEEEEEC
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc-----------------CCceEEEc
Confidence 3444445567899999999999999999999877999999999999888875432 46999999
Q ss_pred cccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 368 d~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
|+.+++ ++.++||+|++..+ +.+...+..++..+.++|+|||.++...
T Consensus 97 d~~~~~----~~~~~fD~v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 97 DLDKLH----LPQDSFDLAYSSLA---LHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CGGGCC----CCTTCEEEEEEESC---GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Chhhcc----CCCCCceEEEEecc---ccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 999887 66789999998643 2233457889999999999999999654
No 53
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.44 E-value=2e-13 Score=134.16 Aligned_cols=107 Identities=20% Similarity=0.243 Sum_probs=92.1
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcC--CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAG--ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aG--a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
...++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.|++++..+++ .+++++.+|+.+
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~~~~~~~~d~~~ 99 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL--------------KNVEVLKSEENK 99 (219)
T ss_dssp TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC--------------TTEEEEECBTTB
T ss_pred CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC--------------CcEEEEeccccc
Confidence 45678999999999999999999985 35999999999999999999998887 579999999998
Q ss_pred cccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 372 LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++ ++.++||+|++..+-+.+ ..+..++..+.++|+|||.++..
T Consensus 100 ~~----~~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~i~ 142 (219)
T 3dh0_A 100 IP----LPDNTVDFIFMAFTFHEL---SEPLKFLEELKRVAKPFAYLAII 142 (219)
T ss_dssp CS----SCSSCEEEEEEESCGGGC---SSHHHHHHHHHHHEEEEEEEEEE
T ss_pred CC----CCCCCeeEEEeehhhhhc---CCHHHHHHHHHHHhCCCeEEEEE
Confidence 87 777899999986543322 45688999999999999999954
No 54
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.44 E-value=6.2e-13 Score=132.07 Aligned_cols=114 Identities=21% Similarity=0.241 Sum_probs=90.1
Q ss_pred HHHHhCCC-CCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 287 QAILENPS-LMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 287 ~aI~~~~~-~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
+.+..... ..++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.|++++..+ .++++
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------~~~~~ 96 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN----------------LKVKY 96 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC----------------TTEEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC----------------CCEEE
Confidence 34444433 5678999999999999999999983 349999999999999999886533 36999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+++|+.+++ ++ ++||+|++..+-+.+ .......++..+.++|||||.++...
T Consensus 97 ~~~d~~~~~----~~-~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 97 IEADYSKYD----FE-EKYDMVVSALSIHHL-EDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp EESCTTTCC----CC-SCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCchhccC----CC-CCceEEEEeCccccC-CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999999988 55 899999997543333 33344568999999999999999543
No 55
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.44 E-value=1.3e-12 Score=136.17 Aligned_cols=116 Identities=20% Similarity=0.164 Sum_probs=96.6
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~ 363 (633)
..+.+.......++.+|||||||+|.++..+++. |+ +|+|+|+|+.+++.|++++...++. ++++
T Consensus 78 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~-------------~~v~ 143 (318)
T 2fk8_A 78 KVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTN-------------RSRQ 143 (318)
T ss_dssp HHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCS-------------SCEE
T ss_pred HHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCC-------------CceE
Confidence 4455666666778999999999999999999988 87 9999999999999999999988886 7899
Q ss_pred EEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++.+|+.+++ ++||+|++..+.+.+ ....+..++..+.++|||||.++...
T Consensus 144 ~~~~d~~~~~-------~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 144 VLLQGWEDFA-------EPVDRIVSIEAFEHF-GHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp EEESCGGGCC-------CCCSEEEEESCGGGT-CGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEECChHHCC-------CCcCEEEEeChHHhc-CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999987653 689999986543222 22567889999999999999999644
No 56
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.43 E-value=5.8e-13 Score=134.33 Aligned_cols=114 Identities=20% Similarity=0.297 Sum_probs=93.5
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
+.+.......++.+|||||||+|.++..+++. |+ +|+|+|+|+.+++.|++++... .+++++
T Consensus 45 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~----------------~~~~~~ 107 (266)
T 3ujc_A 45 KKILSDIELNENSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGN----------------NKIIFE 107 (266)
T ss_dssp HHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSC----------------TTEEEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcC----------------CCeEEE
Confidence 44555556778899999999999999999997 65 9999999999999988765432 479999
Q ss_pred EccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 366 ~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++|+.+++ ++.++||+|++..+-+.+ ....+..++..+.++|||||.++...
T Consensus 108 ~~d~~~~~----~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 108 ANDILTKE----FPENNFDLIYSRDAILAL-SLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp ECCTTTCC----CCTTCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECccccCC----CCCCcEEEEeHHHHHHhc-ChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 99999987 777899999986442222 23678899999999999999999653
No 57
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.43 E-value=4.3e-13 Score=136.18 Aligned_cols=112 Identities=18% Similarity=0.295 Sum_probs=91.7
Q ss_pred CCC-CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 294 SLM-KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 294 ~~~-~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
... ++.+|||+|||+|.+++.+++.+..+|+|||+++.+++.|++++..+++. ++++++++|+.++
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~-------------~~v~~~~~D~~~~ 111 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLE-------------DQIEIIEYDLKKI 111 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCT-------------TTEEEECSCGGGG
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCc-------------ccEEEEECcHHHh
Confidence 345 78999999999999999999997779999999999999999999999997 7899999999987
Q ss_pred ccccccCCCcccEEEEecccccc-----cC------------hhhHHHHHHHHhhcccCCcEEEe
Q 006731 373 GESMQIQPHSVDVLVSEWMGYCL-----LY------------ESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~~L-----~~------------e~~l~~vl~a~~r~LkpgG~lip 420 (633)
... ++.++||+|++++.-+.. .. ...+..++..+.++|||||.++.
T Consensus 112 ~~~--~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 112 TDL--IPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp GGT--SCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhh--hccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 621 346899999997531111 00 12356799999999999999985
No 58
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.43 E-value=4.2e-14 Score=144.03 Aligned_cols=129 Identities=17% Similarity=0.172 Sum_probs=88.7
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCC-----CCCCC----------C
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQS-----EGNIN----------N 358 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~-----~~~~~----------~ 358 (633)
...++.+|||||||+|+++..++..|+.+|+|+|+|+.|++.|++.++.+....+.++. +..+. .
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 45678999999999999999888888888999999999999999987754311000000 00000 0
Q ss_pred CCcEE-EEEccccccccccccCCCcccEEEEecccccc-cChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 359 AGKME-VVQGMVEELGESMQIQPHSVDVLVSEWMGYCL-LYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 359 ~~~I~-vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L-~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
..+|+ ++++|+.+.........++||+|++..+-+.+ .....+..++..+.++|||||.++.+.
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 12354 89999987421000124689999997543322 233567789999999999999999763
No 59
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.43 E-value=1.6e-13 Score=139.77 Aligned_cols=105 Identities=24% Similarity=0.247 Sum_probs=84.5
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
+.+.|.... ..+.+|||||||+|.++..+++.|. +|+|||+|+.|++.|++ . .+|++
T Consensus 29 l~~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~------~--------------~~v~~ 85 (257)
T 4hg2_A 29 LFRWLGEVA--PARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALR------H--------------PRVTY 85 (257)
T ss_dssp HHHHHHHHS--SCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCC------C--------------TTEEE
T ss_pred HHHHHHHhc--CCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhh------c--------------CCcee
Confidence 334454432 3457999999999999999999986 99999999999976542 1 67999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+++++++++ +++++||+|++....+.+ .++.++.++.|+|||||.++.
T Consensus 86 ~~~~~e~~~----~~~~sfD~v~~~~~~h~~----~~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 86 AVAPAEDTG----LPPASVDVAIAAQAMHWF----DLDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp EECCTTCCC----CCSSCEEEEEECSCCTTC----CHHHHHHHHHHHEEEEEEEEE
T ss_pred ehhhhhhhc----ccCCcccEEEEeeehhHh----hHHHHHHHHHHHcCCCCEEEE
Confidence 999999998 888999999985432222 367899999999999999874
No 60
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.43 E-value=1.1e-12 Score=132.04 Aligned_cols=115 Identities=26% Similarity=0.276 Sum_probs=92.5
Q ss_pred HHHHHHHh-CCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcE
Q 006731 284 SYRQAILE-NPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (633)
Q Consensus 284 ~y~~aI~~-~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I 362 (633)
...+.+.. .....++.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|++++ ..+. .++
T Consensus 25 ~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-~~~~--------------~~~ 88 (263)
T 2yqz_A 25 QIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKI-AGVD--------------RKV 88 (263)
T ss_dssp HHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHT-TTSC--------------TTE
T ss_pred HHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh-hccC--------------Cce
Confidence 34444433 33456789999999999999999999876 9999999999999999887 3332 689
Q ss_pred EEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 363 ~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+++.+|+++++ ++.++||+|++..+-+ +-.....++..+.++|||||.++..
T Consensus 89 ~~~~~d~~~~~----~~~~~fD~v~~~~~l~---~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 89 QVVQADARAIP----LPDESVHGVIVVHLWH---LVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEEESCTTSCC----SCTTCEEEEEEESCGG---GCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcccccCC----CCCCCeeEEEECCchh---hcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 99999999887 7778999999864422 3345788999999999999999865
No 61
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.43 E-value=8.9e-13 Score=136.42 Aligned_cols=115 Identities=17% Similarity=0.220 Sum_probs=92.7
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHH--cCCCeEEEEeCCHHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCc
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQ--AGASRVIAVEASEKMAAVATQIAKDN-DFWWDRPQSEGNINNAGK 361 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~--aGa~~V~aVD~S~~~~~~A~~~~~~n-gl~~~~~~~~~~~~~~~~ 361 (633)
+.+.|.... ..++.+|||||||+|.++..+++ .+..+|+|||+|+.+++.|+++++.+ +.. .+
T Consensus 25 ~~~~l~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-------------~~ 90 (299)
T 3g5t_A 25 FYKMIDEYH-DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTY-------------KN 90 (299)
T ss_dssp HHHHHHHHC-CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CC-------------TT
T ss_pred HHHHHHHHh-cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCC-------------Cc
Confidence 334444432 24789999999999999999997 34569999999999999999999876 443 78
Q ss_pred EEEEEccccccccccccCC------CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 362 MEVVQGMVEELGESMQIQP------HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 362 I~vi~gd~e~l~~~~~l~~------~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++++++|+++++ ++. ++||+|++..+.+.+ .+..++..+.++|+|||.++..
T Consensus 91 v~~~~~d~~~~~----~~~~~~~~~~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 91 VSFKISSSDDFK----FLGADSVDKQKIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEEECCTTCCG----GGCTTTTTSSCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcCHHhCC----ccccccccCCCeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEEE
Confidence 999999999987 555 799999996543333 6788999999999999999863
No 62
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.42 E-value=7.9e-13 Score=127.85 Aligned_cols=110 Identities=20% Similarity=0.277 Sum_probs=90.4
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a--Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
..++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|+++++.+++. .+++++++|++++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~ 86 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI-------------DRVTLIKDGHQNM 86 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG-------------GGEEEECSCGGGG
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CCeEEEECCHHHH
Confidence 467899999999999999999987 3459999999999999999999999886 7899999999887
Q ss_pred ccccccCCCcccEEEEecccc-------cccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 373 GESMQIQPHSVDVLVSEWMGY-------CLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~-------~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.. ...++||+|++.. ++ ..........++..+.++|||||.++..
T Consensus 87 ~~---~~~~~fD~v~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 87 DK---YIDCPVKAVMFNL-GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp GG---TCCSCEEEEEEEE-SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hh---hccCCceEEEEcC-CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 52 2347899999874 22 1222334567999999999999999853
No 63
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.42 E-value=3.6e-13 Score=138.59 Aligned_cols=102 Identities=19% Similarity=0.124 Sum_probs=88.4
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||+|||+|.+++.+++.|+.+|+|+|+|+.+++.|+++++.|++. ++++++++|+.++.
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~-------------~~v~~~~~D~~~~~-- 188 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE-------------DRMSAYNMDNRDFP-- 188 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT-------------TTEEEECSCTTTCC--
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------ceEEEEECCHHHhc--
Confidence 468999999999999999999998878999999999999999999999996 77999999999987
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
. .++||+|++.+... ...++..+.++|+|||.++...
T Consensus 189 --~-~~~fD~Vi~~~p~~-------~~~~l~~~~~~LkpgG~l~~~~ 225 (278)
T 2frn_A 189 --G-ENIADRILMGYVVR-------THEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp --C-CSCEEEEEECCCSS-------GGGGHHHHHHHEEEEEEEEEEE
T ss_pred --c-cCCccEEEECCchh-------HHHHHHHHHHHCCCCeEEEEEE
Confidence 3 57899999865411 1456777889999999999654
No 64
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.42 E-value=6.4e-13 Score=125.85 Aligned_cols=112 Identities=18% Similarity=0.152 Sum_probs=87.0
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
..+.......++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|++++..+++. +++ ++
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-------------~~~-~~ 80 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVS-------------DRI-AV 80 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCT-------------TSE-EE
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCC-------------CCE-EE
Confidence 33444445678889999999999999999988 3459999999999999999999998885 689 88
Q ss_pred EccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 366 ~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+++..+... ...++||+|++... +.+ ..++..+.++|+|||.++...
T Consensus 81 ~~d~~~~~~---~~~~~~D~i~~~~~---~~~----~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 81 QQGAPRAFD---DVPDNPDVIFIGGG---LTA----PGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp ECCTTGGGG---GCCSCCSEEEECC----TTC----TTHHHHHHHTCCTTCEEEEEE
T ss_pred ecchHhhhh---ccCCCCCEEEECCc---ccH----HHHHHHHHHhcCCCCEEEEEe
Confidence 898854210 22278999997543 222 567888899999999998543
No 65
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.42 E-value=9.2e-13 Score=128.23 Aligned_cols=120 Identities=17% Similarity=0.212 Sum_probs=92.4
Q ss_pred hhhhHHHHHHHHhCCCCCCCCEEEEECCCcchH-HHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 006731 279 KVRTDSYRQAILENPSLMKGAVVMDIGCGTGIL-SLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNIN 357 (633)
Q Consensus 279 ~~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~l-sl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~ 357 (633)
......+.+.+.. ..++.+|||+|||+|.+ ...+++.|. +|+|+|+|+.+++.|++++..++
T Consensus 8 ~~~~~~~~~~~~~---~~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~------------- 70 (209)
T 2p8j_A 8 QPQLYRFLKYCNE---SNLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENN------------- 70 (209)
T ss_dssp CTHHHHHHHHHHH---SSSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHT-------------
T ss_pred hhhHHHHHHHHhc---cCCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcC-------------
Confidence 3334444444443 35678999999999987 445566666 99999999999999999987655
Q ss_pred CCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 358 NAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 358 ~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.+++++++|+.+++ ++.++||+|++..+.+++ ....+..++..+.++|||||.++...
T Consensus 71 --~~~~~~~~d~~~~~----~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 71 --FKLNISKGDIRKLP----FKDESMSFVYSYGTIFHM-RKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp --CCCCEEECCTTSCC----SCTTCEEEEEECSCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CceEEEECchhhCC----CCCCceeEEEEcChHHhC-CHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 45889999999887 777899999986433322 24678889999999999999999654
No 66
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.42 E-value=3.2e-13 Score=134.45 Aligned_cols=100 Identities=19% Similarity=0.231 Sum_probs=83.8
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++... .++++++++++++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~------------------~~v~~~~~d~~~~~-- 99 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLK------------------DGITYIHSRFEDAQ-- 99 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSC------------------SCEEEEESCGGGCC--
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhh------------------CCeEEEEccHHHcC--
Confidence 4678999999999999999999887 89999999999999987653 26999999998874
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHh-hcccCCcEEEeec
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARD-QWLKPGGAILPDT 422 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~-r~LkpgG~lip~~ 422 (633)
++++||+|++..+ +.+-..+..++..+. ++|||||.++...
T Consensus 100 ---~~~~fD~v~~~~~---l~~~~~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 100 ---LPRRYDNIVLTHV---LEHIDDPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp ---CSSCEEEEEEESC---GGGCSSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ---cCCcccEEEEhhH---HHhhcCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 4588999998654 333345688999999 9999999998643
No 67
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.42 E-value=4.9e-13 Score=138.94 Aligned_cols=124 Identities=20% Similarity=0.268 Sum_probs=100.2
Q ss_pred hhhhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHH--HcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 006731 279 KVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAA--QAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNI 356 (633)
Q Consensus 279 ~~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a--~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~ 356 (633)
+.|...+...+... +.++.+|||||||+|.++..++ .....+|+|+|+|+.+++.|++++..+++.
T Consensus 102 ~~~~~~~~~~l~~~--l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---------- 169 (305)
T 3ocj_A 102 RERHGHFRRALQRH--LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA---------- 169 (305)
T ss_dssp HHHHHHHHHHHHHH--CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG----------
T ss_pred hHHHHHHHHHHHhh--CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC----------
Confidence 34455566666443 4678999999999999999885 333459999999999999999999988886
Q ss_pred CCCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 357 NNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 357 ~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++++++++|+.+++ ++ ++||+|++..+.+++........++..+.++|||||.++...
T Consensus 170 ---~~v~~~~~d~~~~~----~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 170 ---GQITLHRQDAWKLD----TR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp ---GGEEEEECCGGGCC----CC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ---CceEEEECchhcCC----cc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 78999999999987 66 899999997654544445555668999999999999999654
No 68
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.41 E-value=1.3e-12 Score=130.45 Aligned_cols=105 Identities=19% Similarity=0.194 Sum_probs=89.6
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
..++.+|||||||+|.+++.+++.| +.+|+|+|+++.+++.|+++++.+|+. ++|+++++|..+..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~-------------~~I~~~~gD~l~~~ 85 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLT-------------SKIDVRLANGLSAF 85 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCT-------------TTEEEEECSGGGGC
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CcEEEEECchhhcc
Confidence 3578899999999999999999997 568999999999999999999999997 88999999998765
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.+.++||+|+...||- ..+..++.+..+.|+++|.+|.+
T Consensus 86 ----~~~~~~D~IviaGmGg-----~lI~~IL~~~~~~l~~~~~lIlq 124 (230)
T 3lec_A 86 ----EEADNIDTITICGMGG-----RLIADILNNDIDKLQHVKTLVLQ 124 (230)
T ss_dssp ----CGGGCCCEEEEEEECH-----HHHHHHHHHTGGGGTTCCEEEEE
T ss_pred ----ccccccCEEEEeCCch-----HHHHHHHHHHHHHhCcCCEEEEE
Confidence 3334799998766643 34677888888999999999843
No 69
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.41 E-value=1.1e-12 Score=132.07 Aligned_cols=111 Identities=19% Similarity=0.214 Sum_probs=92.0
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
++|... ..++.+|||||||+|.+++.+++.| +.+|+|+|+++.+++.|+++++.||+. ++|+++
T Consensus 13 ~~i~~~--v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~-------------~~I~v~ 77 (244)
T 3gnl_A 13 EKVASY--ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT-------------EQIDVR 77 (244)
T ss_dssp HHHHTT--CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT-------------TTEEEE
T ss_pred HHHHHh--CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------ceEEEE
Confidence 345444 3578899999999999999999997 468999999999999999999999997 889999
Q ss_pred EccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 366 ~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.+|..+.. .+..+||+||+..||- ..+..++.+....|+++|.+|.+
T Consensus 78 ~gD~l~~~----~~~~~~D~IviagmGg-----~lI~~IL~~~~~~L~~~~~lIlq 124 (244)
T 3gnl_A 78 KGNGLAVI----EKKDAIDTIVIAGMGG-----TLIRTILEEGAAKLAGVTKLILQ 124 (244)
T ss_dssp ECSGGGGC----CGGGCCCEEEEEEECH-----HHHHHHHHHTGGGGTTCCEEEEE
T ss_pred ecchhhcc----CccccccEEEEeCCch-----HHHHHHHHHHHHHhCCCCEEEEE
Confidence 99998765 3333699998765543 34677888889999999999843
No 70
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.41 E-value=6.7e-13 Score=138.31 Aligned_cols=117 Identities=12% Similarity=0.062 Sum_probs=82.8
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccc------c
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV------E 370 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~------e 370 (633)
++.+|||||||+|..+..+++.+..+|+|||+|+.|++.|+++....+... ....-+++++++++ +
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~--------~~~~~~~~f~~~d~~~d~~~~ 119 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGI--------KTKYYKFDYIQETIRSDTFVS 119 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC------------CCCEEEEEECCTTSSSHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccc--------cccccccchhhhhcccchhhh
Confidence 578999999999976666666665699999999999999999887554310 00001377888887 4
Q ss_pred ccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeecc
Q 006731 371 ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (633)
Q Consensus 371 ~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~~ 423 (633)
++.. .++.++||+|+|..+-+++........++.++.++|||||.++.++.
T Consensus 120 ~l~~--~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 120 SVRE--VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp HHHT--TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhc--cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 3321 13567999999864333222222457999999999999999996553
No 71
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.41 E-value=1.7e-12 Score=123.99 Aligned_cols=112 Identities=18% Similarity=0.242 Sum_probs=91.3
Q ss_pred HHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-cEEEEEc
Q 006731 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG-KMEVVQG 367 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~-~I~vi~g 367 (633)
+.......++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++..+++. + +++++++
T Consensus 44 l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~-------------~~~~~~~~~ 109 (194)
T 1dus_A 44 LVENVVVDKDDDILDLGCGYGVIGIALADEV-KSTTMADINRRAIKLAKENIKLNNLD-------------NYDIRVVHS 109 (194)
T ss_dssp HHHHCCCCTTCEEEEETCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCT-------------TSCEEEEEC
T ss_pred HHHHcccCCCCeEEEeCCCCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHHHcCCC-------------ccceEEEEC
Confidence 4444445688999999999999999999984 49999999999999999999988873 3 4999999
Q ss_pred cccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 368 d~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
|+.+.. +.++||+|++...-+ .....+..++..+.++|+|||.++..
T Consensus 110 d~~~~~-----~~~~~D~v~~~~~~~--~~~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 110 DLYENV-----KDRKYNKIITNPPIR--AGKEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp STTTTC-----TTSCEEEEEECCCST--TCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhccc-----ccCCceEEEECCCcc--cchhHHHHHHHHHHHHcCCCCEEEEE
Confidence 998743 457899999865311 12456788999999999999999854
No 72
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.40 E-value=4.5e-13 Score=138.69 Aligned_cols=109 Identities=19% Similarity=0.199 Sum_probs=88.2
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
++.+|||||||+|.++..+++.|. +|+|||+|+.+++.|++++...++. ...+++++++|+.+++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~-----------~~~~v~~~~~d~~~~~--- 146 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPAD-----------VRDRCTLVQGDMSAFA--- 146 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHH-----------HHTTEEEEECBTTBCC---
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccc-----------cccceEEEeCchhcCC---
Confidence 345999999999999999999986 8999999999999999998876520 0046999999999987
Q ss_pred ccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 377 ~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+ .++||+|++............+..++..+.++|||||.++...
T Consensus 147 -~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 147 -L-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp -C-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -c-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 5 5899999864322223344567899999999999999999654
No 73
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.40 E-value=1.8e-12 Score=128.99 Aligned_cols=104 Identities=18% Similarity=0.172 Sum_probs=87.8
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
..++.+|||||||+|.+++.+++.| +.+|+|+|+++.+++.|+++++.||+. ++|+++.+|..+..
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~-------------~~i~~~~~d~l~~l 79 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK-------------EKIQVRLANGLAAF 79 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT-------------TTEEEEECSGGGGC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------ceEEEEECchhhhc
Confidence 3577899999999999999999997 468999999999999999999999997 78999999986432
Q ss_pred cccccCCC-cccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 374 ESMQIQPH-SVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 374 ~~~~l~~~-~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+.+ +||+|+...||- ..+..++......|+|+|.++.+
T Consensus 80 -----~~~~~~D~IviaG~Gg-----~~i~~Il~~~~~~L~~~~~lVlq 118 (225)
T 3kr9_A 80 -----EETDQVSVITIAGMGG-----RLIARILEEGLGKLANVERLILQ 118 (225)
T ss_dssp -----CGGGCCCEEEEEEECH-----HHHHHHHHHTGGGCTTCCEEEEE
T ss_pred -----ccCcCCCEEEEcCCCh-----HHHHHHHHHHHHHhCCCCEEEEE
Confidence 223 699998765543 34677889999999999999843
No 74
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.40 E-value=5.2e-13 Score=133.04 Aligned_cols=111 Identities=18% Similarity=0.218 Sum_probs=90.4
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
+...+... +.++.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|+++. .. .++++
T Consensus 43 ~~~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~----~~-------------~~~~~ 102 (242)
T 3l8d_A 43 IIPFFEQY--VKKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERG----EG-------------PDLSF 102 (242)
T ss_dssp HHHHHHHH--SCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTT----CB-------------TTEEE
T ss_pred HHHHHHHH--cCCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhc----cc-------------CCceE
Confidence 44445443 34788999999999999999999987 9999999999998887653 22 67999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+++|+.+++ ++.++||+|++..+ +.+...+..++..+.++|+|||.++...
T Consensus 103 ~~~d~~~~~----~~~~~fD~v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 103 IKGDLSSLP----FENEQFEAIMAINS---LEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp EECBTTBCS----SCTTCEEEEEEESC---TTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhcCC----CCCCCccEEEEcCh---HhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 999999987 77789999998643 3333567789999999999999998553
No 75
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.40 E-value=1.1e-12 Score=134.65 Aligned_cols=103 Identities=20% Similarity=0.295 Sum_probs=89.6
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|++++..+++ +++++++|+.++.
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~---------------~~~~~~~d~~~~~-- 180 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL---------------NISTALYDINAAN-- 180 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC---------------CEEEEECCGGGCC--
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC---------------ceEEEEecccccc--
Confidence 3789999999999999999999988 999999999999999999988764 5999999999887
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
. .++||+|++..+.+++ ....+..++..+.++|+|||.++.
T Consensus 181 --~-~~~fD~i~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 181 --I-QENYDFIVSTVVFMFL-NRERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp --C-CSCEEEEEECSSGGGS-CGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred --c-cCCccEEEEccchhhC-CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 5 6899999997654433 445678899999999999999774
No 76
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.39 E-value=1.8e-12 Score=133.34 Aligned_cols=117 Identities=20% Similarity=0.269 Sum_probs=93.7
Q ss_pred HHHHHHhC-CCCCCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 006731 285 YRQAILEN-PSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (633)
Q Consensus 285 y~~aI~~~-~~~~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~ 361 (633)
+...+... ....++.+|||||||+|.++..+++. + ..+|+|+|+|+.+++.|++++...+ .+
T Consensus 9 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---------------~~ 73 (284)
T 3gu3_A 9 YVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP---------------YD 73 (284)
T ss_dssp HHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS---------------SE
T ss_pred HHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC---------------Cc
Confidence 34444433 35567899999999999999999987 2 2599999999999999999987654 47
Q ss_pred EEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeecce
Q 006731 362 MEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (633)
Q Consensus 362 I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~~t 424 (633)
++++++|+.+++ ++ ++||+|++..+. .+......++..+.++|||||.++.....
T Consensus 74 v~~~~~d~~~~~----~~-~~fD~v~~~~~l---~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 74 SEFLEGDATEIE----LN-DKYDIAICHAFL---LHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEESCTTTCC----CS-SCEEEEEEESCG---GGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred eEEEEcchhhcC----cC-CCeeEEEECChh---hcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 999999999887 54 799999987542 33355678999999999999999965544
No 77
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.39 E-value=1.7e-12 Score=125.95 Aligned_cols=102 Identities=28% Similarity=0.375 Sum_probs=87.5
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++ +|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++..++. +++++++|+.+++
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~---------------~~~~~~~d~~~~~-- 89 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGV---------------KITTVQSNLADFD-- 89 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTC---------------CEEEECCBTTTBS--
T ss_pred CCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCC---------------ceEEEEcChhhcC--
Confidence 356 999999999999999999987 999999999999999999887653 5899999999887
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++.++||+|++.. .......+..++..+.++|+|||.++..
T Consensus 90 --~~~~~fD~v~~~~---~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 90 --IVADAWEGIVSIF---CHLPSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp --CCTTTCSEEEEEC---CCCCHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred --CCcCCccEEEEEh---hcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 6778999999842 2235567889999999999999999954
No 78
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.39 E-value=2.3e-12 Score=125.88 Aligned_cols=109 Identities=18% Similarity=0.127 Sum_probs=87.5
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEE
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~ 366 (633)
..+.......++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|+++++.+++ .++++++
T Consensus 67 ~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~v~~vD~~~~~~~~a~~~~~~~~~--------------~~v~~~~ 131 (210)
T 3lbf_A 67 ARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQ-HVCSVERIKGLQWQARRRLKNLDL--------------HNVSTRH 131 (210)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHHHHHHHTTC--------------CSEEEEE
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCC-EEEEEecCHHHHHHHHHHHHHcCC--------------CceEEEE
Confidence 3344444567889999999999999999999965 999999999999999999998887 6799999
Q ss_pred ccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeecc
Q 006731 367 GMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (633)
Q Consensus 367 gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~~ 423 (633)
+|+.+.. .+.++||+|++......+. ..+.++|||||.++....
T Consensus 132 ~d~~~~~----~~~~~~D~i~~~~~~~~~~---------~~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 132 GDGWQGW----QARAPFDAIIVTAAPPEIP---------TALMTQLDEGGILVLPVG 175 (210)
T ss_dssp SCGGGCC----GGGCCEEEEEESSBCSSCC---------THHHHTEEEEEEEEEEEC
T ss_pred CCcccCC----ccCCCccEEEEccchhhhh---------HHHHHhcccCcEEEEEEc
Confidence 9998865 3457899999864322221 246789999999986543
No 79
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.39 E-value=2.4e-12 Score=125.75 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=85.0
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
..++.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|++ ++. .+++++++|+.++.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~----~~~--------------~~~~~~~~d~~~~~- 103 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR----HGL--------------DNVEFRQQDLFDWT- 103 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG----GCC--------------TTEEEEECCTTSCC-
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh----cCC--------------CCeEEEecccccCC-
Confidence 55678999999999999999999977 99999999999988876 444 57999999998773
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+.++||+|++..+-+.+ ....+..++..+.++|+|||.++...
T Consensus 104 ----~~~~~D~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 104 ----PDRQWDAVFFAHWLAHV-PDDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp ----CSSCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CCCceeEEEEechhhcC-CHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 46899999986543333 23346889999999999999998654
No 80
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.39 E-value=1.1e-12 Score=140.32 Aligned_cols=114 Identities=18% Similarity=0.214 Sum_probs=89.5
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHH-------HhCCCCCCCCCCCCCCCCC
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIA-------KDNDFWWDRPQSEGNINNA 359 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~-------~~ngl~~~~~~~~~~~~~~ 359 (633)
.|.....+.++.+|||||||+|.+++.+|+. |+.+|+|||+|+.+++.|++++ +.+|+. .
T Consensus 164 ~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~------------~ 231 (438)
T 3uwp_A 164 QMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK------------H 231 (438)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC------------C
T ss_pred HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC------------C
Confidence 3444446788999999999999999998864 7778999999999999998754 344541 1
Q ss_pred CcEEEEEccccccccccccCC--CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 360 GKMEVVQGMVEELGESMQIQP--HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 360 ~~I~vi~gd~e~l~~~~~l~~--~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.+|+|++||+.+++ ++. ..||+|+++.+ + +...+...|..+.+.|||||+|+..
T Consensus 232 ~rVefi~GD~~~lp----~~d~~~~aDVVf~Nn~---~-F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 232 AEYTLERGDFLSEE----WRERIANTSVIFVNNF---A-FGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp CEEEEEECCTTSHH----HHHHHHTCSEEEECCT---T-CCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred CCeEEEECcccCCc----cccccCCccEEEEccc---c-cCchHHHHHHHHHHcCCCCcEEEEe
Confidence 68999999999887 432 47999998653 2 2356677788899999999999944
No 81
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.38 E-value=9.9e-13 Score=131.88 Aligned_cols=100 Identities=17% Similarity=0.207 Sum_probs=85.8
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
.++.+|||||||+|.+++.+++. ...+|+|||+|+.|++.|+++++.+++ .+|++++++++++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~~v~~~~~d~~~~~- 133 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL--------------ENTTFCHDRAETFG- 133 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC--------------SSEEEEESCHHHHT-
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CCEEEEeccHHHhc-
Confidence 46789999999999999999975 335899999999999999999998888 46999999999876
Q ss_pred ccccC---CCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 375 SMQIQ---PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 375 ~~~l~---~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
.+ .++||+|++..+ ..+..++..+.++|+|||.++.
T Consensus 134 ---~~~~~~~~fD~V~~~~~-------~~~~~~l~~~~~~LkpgG~l~~ 172 (240)
T 1xdz_A 134 ---QRKDVRESYDIVTARAV-------ARLSVLSELCLPLVKKNGLFVA 172 (240)
T ss_dssp ---TCTTTTTCEEEEEEECC-------SCHHHHHHHHGGGEEEEEEEEE
T ss_pred ---ccccccCCccEEEEecc-------CCHHHHHHHHHHhcCCCCEEEE
Confidence 32 478999998542 3467899999999999999985
No 82
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.38 E-value=1.4e-12 Score=132.04 Aligned_cols=110 Identities=18% Similarity=0.233 Sum_probs=88.8
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
+.+.+... ..++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++ .++++
T Consensus 40 ~~~~l~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-------------------~~~~~ 97 (263)
T 3pfg_A 40 LAALVRRH--SPKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRN-------------------PDAVL 97 (263)
T ss_dssp HHHHHHHH--CTTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHC-------------------TTSEE
T ss_pred HHHHHHhh--CCCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhC-------------------CCCEE
Confidence 33444433 24578999999999999999999987 8999999999999988764 45899
Q ss_pred EEccccccccccccCCCcccEEEEec-ccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEW-MGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~-mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+++|+.+++ + .++||+|++.. +-+.+.....+..++..+.++|||||.++.+
T Consensus 98 ~~~d~~~~~----~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 98 HHGDMRDFS----L-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EECCTTTCC----C-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EECChHHCC----c-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 999999987 5 58999999864 3333434457788999999999999999965
No 83
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.38 E-value=1.4e-12 Score=132.07 Aligned_cols=104 Identities=18% Similarity=0.168 Sum_probs=86.8
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
..++.+|||||||+|.+++.+++. +..+|+|||.|+.+++.|+++++.+++ .+|++++++++++.
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l--------------~~v~~~~~d~~~~~ 143 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL--------------KGARALWGRAEVLA 143 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC--------------SSEEEEECCHHHHT
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC--------------CceEEEECcHHHhh
Confidence 356789999999999999999987 456999999999999999999999998 45999999999886
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
... ...++||+|+|..+ ..+..++..+.++|||||.++.
T Consensus 144 ~~~-~~~~~fD~I~s~a~-------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 144 REA-GHREAYARAVARAV-------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp TST-TTTTCEEEEEEESS-------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred ccc-ccCCCceEEEECCc-------CCHHHHHHHHHHHcCCCeEEEE
Confidence 100 01378999999643 2357889999999999999884
No 84
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.38 E-value=1.2e-12 Score=130.21 Aligned_cols=105 Identities=17% Similarity=0.135 Sum_probs=88.0
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++...+.. .+++++++|+.++.
T Consensus 65 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~~-- 128 (235)
T 3lcc_A 65 LPLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKA-------------EYFSFVKEDVFTWR-- 128 (235)
T ss_dssp SCCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGG-------------GGEEEECCCTTTCC--
T ss_pred CCCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCC-------------cceEEEECchhcCC--
Confidence 3456999999999999999988776 8999999999999999998876554 78999999999876
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+.++||+|++..+-+.+ .......++..+.++|||||.++.
T Consensus 129 ---~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 129 ---PTELFDLIFDYVFFCAI-EPEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp ---CSSCEEEEEEESSTTTS-CGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred ---CCCCeeEEEEChhhhcC-CHHHHHHHHHHHHHHCCCCcEEEE
Confidence 34699999986543322 344778899999999999999985
No 85
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.37 E-value=3.6e-12 Score=131.58 Aligned_cols=102 Identities=18% Similarity=0.243 Sum_probs=85.5
Q ss_pred CCCCCCCEEEEECCCcchHH-HHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccc
Q 006731 293 PSLMKGAVVMDIGCGTGILS-LFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (633)
Q Consensus 293 ~~~~~~~~VLDVGcGtG~ls-l~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e 370 (633)
..+.++.+|||||||+|.++ +.+|+. |+ +|+|||+|+.|++.|+++++..|+ ++|+++++|+.
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl--------------~~v~~v~gDa~ 182 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGV--------------DGVNVITGDET 182 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTC--------------CSEEEEESCGG
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCC--------------CCeEEEECchh
Confidence 35688999999999998654 666775 55 999999999999999999998887 68999999998
Q ss_pred ccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 371 ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 371 ~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+++ .++||+|++... ......++.++.+.|||||+++..
T Consensus 183 ~l~------d~~FDvV~~~a~------~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 183 VID------GLEFDVLMVAAL------AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp GGG------GCCCSEEEECTT------CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred hCC------CCCcCEEEECCC------ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 765 478999997432 145678999999999999999953
No 86
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.37 E-value=2e-12 Score=126.01 Aligned_cols=99 Identities=23% Similarity=0.358 Sum_probs=86.1
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||||||+|.++..+++.|..+|+|+|+|+.+++.|++++..+++. +++++++|+.+..
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--------------~v~~~~~d~~~~~-- 122 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY--------------DIALQKTSLLADV-- 122 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC--------------CCEEEESSTTTTC--
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC--------------ceEEEeccccccC--
Confidence 478899999999999999999988889999999999999999999998884 4999999997653
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
.++||+|++.... ..+..++..+.++|+|||.++.
T Consensus 123 ----~~~fD~i~~~~~~------~~~~~~l~~~~~~L~~gG~l~~ 157 (205)
T 3grz_A 123 ----DGKFDLIVANILA------EILLDLIPQLDSHLNEDGQVIF 157 (205)
T ss_dssp ----CSCEEEEEEESCH------HHHHHHGGGSGGGEEEEEEEEE
T ss_pred ----CCCceEEEECCcH------HHHHHHHHHHHHhcCCCCEEEE
Confidence 4789999986432 2357788999999999999985
No 87
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.37 E-value=1.3e-12 Score=126.88 Aligned_cols=100 Identities=21% Similarity=0.309 Sum_probs=85.0
Q ss_pred CCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccc
Q 006731 298 GAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQ 377 (633)
Q Consensus 298 ~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~ 377 (633)
+.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|+++. .+++++++|+.+++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-------------------~~~~~~~~d~~~~~---- 97 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH-------------------PSVTFHHGTITDLS---- 97 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC-------------------TTSEEECCCGGGGG----
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC-------------------CCCeEEeCcccccc----
Confidence 78999999999999999999987 9999999999999888762 56899999999987
Q ss_pred cCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 378 IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 378 l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++.++||+|++..+-+.+ ....+..++..+.++|||||.++...
T Consensus 98 ~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 98 DSPKRWAGLLAWYSLIHM-GPGELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp GSCCCEEEEEEESSSTTC-CTTTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCCeEEEEehhhHhcC-CHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 777899999986543322 22467889999999999999998643
No 88
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=3.4e-12 Score=120.93 Aligned_cols=106 Identities=18% Similarity=0.248 Sum_probs=87.4
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g 367 (633)
.+.......++.+|||+|||+|.++..+++ +..+|+|+|+++.+++.|+++++.+++ .+++++++
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------~~~~~~~~ 90 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI--------------KNCQIIKG 90 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC--------------CSEEEEES
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC--------------CcEEEEEC
Confidence 344333556789999999999999999999 556999999999999999999999887 67999999
Q ss_pred cccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 368 d~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
|+.+ . ++.++||+|++... ..+..++..+.++ |||.++...
T Consensus 91 d~~~-~----~~~~~~D~i~~~~~-------~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 91 RAED-V----LDKLEFNKAFIGGT-------KNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp CHHH-H----GGGCCCSEEEECSC-------SCHHHHHHHHHHT--TCCEEEEEE
T ss_pred Cccc-c----ccCCCCcEEEECCc-------ccHHHHHHHHhhC--CCCEEEEEe
Confidence 9987 4 55578999998654 3457788888877 999998543
No 89
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.36 E-value=2.8e-12 Score=122.26 Aligned_cols=111 Identities=23% Similarity=0.294 Sum_probs=90.8
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEE
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~ 366 (633)
..+.......++.+|||+|||+|.++..+++.+ .+|+|+|.|+.+++.|++++..+++. .++++++
T Consensus 23 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~-------------~~~~~~~ 88 (192)
T 1l3i_A 23 CLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLG-------------DNVTLME 88 (192)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCC-------------TTEEEEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCC-------------cceEEEe
Confidence 334443456788999999999999999999988 69999999999999999999988886 6899999
Q ss_pred ccccccccccccCC-CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 367 GMVEELGESMQIQP-HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 367 gd~e~l~~~~~l~~-~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+++.+. ++. ++||+|++... + ..+..++..+.++|+|||.++...
T Consensus 89 ~d~~~~-----~~~~~~~D~v~~~~~---~---~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 89 GDAPEA-----LCKIPDIDIAVVGGS---G---GELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp SCHHHH-----HTTSCCEEEEEESCC---T---TCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCHHHh-----cccCCCCCEEEECCc---h---HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999872 232 58999998532 1 235788999999999999998543
No 90
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.36 E-value=2.1e-12 Score=126.10 Aligned_cols=105 Identities=27% Similarity=0.323 Sum_probs=84.4
Q ss_pred HHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 286 ~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
.+.+..... ++.+|||||||+|.++..+ |..+|+|+|+|+.+++.|+++. .+++++
T Consensus 27 ~~~l~~~~~--~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~-------------------~~~~~~ 82 (211)
T 2gs9_A 27 ERALKGLLP--PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA-------------------PEATWV 82 (211)
T ss_dssp HHHHHTTCC--CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC-------------------TTSEEE
T ss_pred HHHHHHhcC--CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC-------------------CCcEEE
Confidence 344544432 7899999999999998877 6669999999999999888765 347889
Q ss_pred EccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 366 ~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++++.+++ ++.++||+|++..+ +.+-..+..++..+.++|||||.++..
T Consensus 83 ~~d~~~~~----~~~~~fD~v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 83 RAWGEALP----FPGESFDVVLLFTT---LEFVEDVERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp CCCTTSCC----SCSSCEEEEEEESC---TTTCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EcccccCC----CCCCcEEEEEEcCh---hhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 99999887 77789999998643 333346788999999999999999854
No 91
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.36 E-value=1.9e-12 Score=131.76 Aligned_cols=115 Identities=17% Similarity=0.185 Sum_probs=90.4
Q ss_pred CCCCCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHh---CCCCCCCCCCCCCCCCCCcEEEEEc
Q 006731 292 NPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKD---NDFWWDRPQSEGNINNAGKMEVVQG 367 (633)
Q Consensus 292 ~~~~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~---ngl~~~~~~~~~~~~~~~~I~vi~g 367 (633)
.....++.+|||+|||+|.+++.+++.+ ..+|+|||+++.+++.|++++.. +++. ++++++++
T Consensus 31 ~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~-------------~~v~~~~~ 97 (260)
T 2ozv_A 31 LVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFS-------------ARIEVLEA 97 (260)
T ss_dssp TCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTG-------------GGEEEEEC
T ss_pred HhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCc-------------ceEEEEeC
Confidence 3445678899999999999999999985 35999999999999999999998 8886 78999999
Q ss_pred cccccccc---cccCCCcccEEEEeccccccc----------------ChhhHHHHHHHHhhcccCCcEEEe
Q 006731 368 MVEELGES---MQIQPHSVDVLVSEWMGYCLL----------------YESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 368 d~e~l~~~---~~l~~~~~DvIvse~mg~~L~----------------~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
|+.++... ..++.++||+|++++. |+.. ....+..++..+.++|||||.++.
T Consensus 98 D~~~~~~~~~~~~~~~~~fD~Vv~nPP-y~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 98 DVTLRAKARVEAGLPDEHFHHVIMNPP-YNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp CTTCCHHHHHHTTCCTTCEEEEEECCC-C---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHhhhhhhhccCCCCcCEEEECCC-CcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 99887210 0134678999999842 2221 112367889999999999999884
No 92
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.35 E-value=1.2e-12 Score=128.46 Aligned_cols=101 Identities=24% Similarity=0.300 Sum_probs=83.0
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|++++. .+++++++|+.+++
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~------------------~~~~~~~~d~~~~~-- 102 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP------------------KEFSITEGDFLSFE-- 102 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC------------------TTCCEESCCSSSCC--
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC------------------CceEEEeCChhhcC--
Confidence 4788999999999999999999976 99999999999999987653 36889999999987
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++ ++||+|++..+-+.+ .......++..+.++|||||.++..
T Consensus 103 --~~-~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 103 --VP-TSIDTIVSTYAFHHL-TDDEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp --CC-SCCSEEEEESCGGGS-CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred --CC-CCeEEEEECcchhcC-ChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 66 899999986543322 1222234899999999999999965
No 93
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.35 E-value=4.2e-12 Score=126.42 Aligned_cols=106 Identities=15% Similarity=0.204 Sum_probs=85.3
Q ss_pred HhCCCCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 290 LENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 290 ~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
.....+.++.+|||||||+|.++..+++. |..+|+|||+|+.+++.|+++++.+ .++.++.+|
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------~~v~~~~~d 130 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER----------------ENIIPILGD 130 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC----------------TTEEEEECC
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC----------------CCeEEEECC
Confidence 33444567899999999999999999988 6569999999999999999886543 569999999
Q ss_pred ccc----cccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 369 VEE----LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 369 ~e~----l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+.+ ++ ++ ++||+|+... ........++..+.++|||||.++..
T Consensus 131 ~~~~~~~~~----~~-~~~D~v~~~~-----~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 131 ANKPQEYAN----IV-EKVDVIYEDV-----AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp TTCGGGGTT----TS-CCEEEEEECC-----CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcccccc----cC-ccEEEEEEec-----CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 987 44 54 7899999532 23334577899999999999999853
No 94
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.35 E-value=2.2e-12 Score=130.80 Aligned_cols=109 Identities=24% Similarity=0.368 Sum_probs=90.3
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEE
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~ 363 (633)
.+.+++... ..++.+|||+|||+|.+++.+++.|+ +|+|+|+++.+++.|++++..|++ . ++
T Consensus 109 ~~~~~l~~~--~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~--------------~-v~ 170 (254)
T 2nxc_A 109 LALKALARH--LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGV--------------R-PR 170 (254)
T ss_dssp HHHHHHHHH--CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTC--------------C-CE
T ss_pred HHHHHHHHh--cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCC--------------c-EE
Confidence 344555543 45789999999999999999999998 999999999999999999998887 5 89
Q ss_pred EEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++++++.+. ++.++||+|+++.+. ..+..++..+.++|+|||.++.+
T Consensus 171 ~~~~d~~~~-----~~~~~fD~Vv~n~~~------~~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 171 FLEGSLEAA-----LPFGPFDLLVANLYA------ELHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp EEESCHHHH-----GGGCCEEEEEEECCH------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECChhhc-----CcCCCCCEEEECCcH------HHHHHHHHHHHHHcCCCCEEEEE
Confidence 999998773 335789999986532 23577889999999999999854
No 95
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.35 E-value=7.3e-12 Score=127.58 Aligned_cols=113 Identities=14% Similarity=0.123 Sum_probs=83.2
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEE
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~ 366 (633)
+.+.....+.++.+|||||||+|.++..+++.|+ +|+|||+|+.|++.|++++..+ +++
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~--------------------~v~ 93 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR--------------------CVT 93 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS--------------------CCE
T ss_pred HHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc--------------------cce
Confidence 3445555677899999999999999999999987 9999999999999999887543 233
Q ss_pred ccccccccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 367 GMVEELGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 367 gd~e~l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+++.++... .....++||+|++..+-+.+ ....+..++..+.++| |||+++.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~-~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 94 IDLLDITAEIPKELAGHFDFVLNDRLINRF-TTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp EEECCTTSCCCGGGTTCCSEEEEESCGGGS-CHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred eeeeecccccccccCCCccEEEEhhhhHhC-CHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 444443310 00114689999997543322 3445778899999999 999998653
No 96
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.34 E-value=3.2e-12 Score=137.61 Aligned_cols=115 Identities=16% Similarity=0.137 Sum_probs=91.2
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-cEEEEEcccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG-KMEVVQGMVEELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~-~I~vi~gd~e~l~~ 374 (633)
.++++|||+|||+|.+++.+|+.|+++|+|||+|+.+++.|+++++.|++. + +++++++|+.+...
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~-------------~~~v~~~~~D~~~~l~ 277 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLD-------------MANHQLVVMDVFDYFK 277 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCC-------------CTTEEEEESCHHHHHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------ccceEEEECCHHHHHH
Confidence 578999999999999999999999889999999999999999999999985 5 89999999987531
Q ss_pred ccccCCCcccEEEEeccccc------ccChhhHHHHHHHHhhcccCCcEEEeecc
Q 006731 375 SMQIQPHSVDVLVSEWMGYC------LLYESMLSSVLFARDQWLKPGGAILPDTA 423 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~------L~~e~~l~~vl~a~~r~LkpgG~lip~~~ 423 (633)
.......+||+|++.+.-+. ......+..++..+.++|+|||.++.+.+
T Consensus 278 ~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 278 YARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp HHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 11012358999999754221 11123455678888999999999996654
No 97
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.34 E-value=4.9e-12 Score=125.31 Aligned_cols=108 Identities=24% Similarity=0.284 Sum_probs=86.0
Q ss_pred CCCCCEEEEECCC-cchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 295 LMKGAVVMDIGCG-TGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 295 ~~~~~~VLDVGcG-tG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
..++.+|||+||| +|.+++.+++.+..+|+|+|+|+.+++.|++++..+++ +++++++|+..+.
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---------------~v~~~~~d~~~~~ 117 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS---------------NVRLVKSNGGIIK 117 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC---------------CCEEEECSSCSST
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC---------------CcEEEeCCchhhh
Confidence 4578999999999 99999999998434999999999999999999998874 4899999976543
Q ss_pred cccccCCCcccEEEEecccccc----------------cChhhHHHHHHHHhhcccCCcEEEe
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCL----------------LYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L----------------~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
. ++.++||+|++++.-+.. .....+..++..+.++|||||.++.
T Consensus 118 ~---~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 118 G---VVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp T---TCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEE
T ss_pred h---cccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEE
Confidence 1 445899999997531110 1122347889999999999999984
No 98
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.34 E-value=5.3e-12 Score=125.31 Aligned_cols=111 Identities=18% Similarity=0.257 Sum_probs=88.3
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEE
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~ 363 (633)
.+.+.+.... .++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|+++. .+++
T Consensus 29 ~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~-------------------~~~~ 86 (239)
T 3bxo_A 29 DIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL-------------------PDAT 86 (239)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC-------------------TTCE
T ss_pred HHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC-------------------CCCE
Confidence 3444554432 5678999999999999999999877 9999999999999888753 4588
Q ss_pred EEEccccccccccccCCCcccEEEEec-ccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEW-MGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~-mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++++|+.+++ + .++||+|+|.. .-+.+.....+..++..+.++|+|||.++.+
T Consensus 87 ~~~~d~~~~~----~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 87 LHQGDMRDFR----L-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp EEECCTTTCC----C-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EEECCHHHcc----c-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 9999999887 5 57899999632 2222334466788999999999999999965
No 99
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.34 E-value=5.1e-12 Score=124.54 Aligned_cols=106 Identities=15% Similarity=0.134 Sum_probs=80.1
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.+.++.+|||||||+|.++..+++. |..+|+|||+|+.|++.+.+.++.. .++.++.+|+...
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~----------------~~v~~~~~d~~~~ 117 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER----------------NNIIPLLFDASKP 117 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC----------------SSEEEECSCTTCG
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC----------------CCeEEEEcCCCCc
Confidence 4567899999999999999988886 3459999999999887666665532 4688888988774
Q ss_pred ccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 373 GESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.....++ ++||+|++.. ........++..+.++|||||.++..
T Consensus 118 ~~~~~~~-~~fD~V~~~~-----~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 118 WKYSGIV-EKVDLIYQDI-----AQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp GGTTTTC-CCEEEEEECC-----CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcccc-cceeEEEEec-----cChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 2101133 7899999863 22234456689999999999999854
No 100
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.34 E-value=2.2e-12 Score=132.48 Aligned_cols=100 Identities=19% Similarity=0.144 Sum_probs=85.8
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
..+|.+|||+|||+|.+++.+|+.|+++|+|+|+|+.+++.++++++.|++. ++++++++|..++.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~-------------~~v~~~~~D~~~~~- 188 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE-------------DRMSAYNMDNRDFP- 188 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT-------------TTEEEECSCTTTCC-
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCC-------------CcEEEEeCcHHHhc-
Confidence 4579999999999999999999999889999999999999999999999998 89999999999886
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
+.+.||.|+.....+. ..++....++|||||.+.
T Consensus 189 ----~~~~~D~Vi~~~p~~~-------~~~l~~a~~~lk~gG~ih 222 (278)
T 3k6r_A 189 ----GENIADRILMGYVVRT-------HEFIPKALSIAKDGAIIH 222 (278)
T ss_dssp ----CCSCEEEEEECCCSSG-------GGGHHHHHHHEEEEEEEE
T ss_pred ----cccCCCEEEECCCCcH-------HHHHHHHHHHcCCCCEEE
Confidence 3578999997654322 234555668899999875
No 101
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.33 E-value=1.6e-12 Score=131.20 Aligned_cols=126 Identities=21% Similarity=0.216 Sum_probs=89.3
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCC-----CC--CCCCC--------C
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRP-----QS--EGNIN--------N 358 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~-----~~--~~~~~--------~ 358 (633)
...++.+|||||||+|.++..+++.|+.+|+|+|+|+.+++.|++++..++...... .. ..... .
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 456789999999999999999998887799999999999999998876543100000 00 00000 0
Q ss_pred CCcE-EEEEccccccccccccCC---CcccEEEEecccc-cccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 359 AGKM-EVVQGMVEELGESMQIQP---HSVDVLVSEWMGY-CLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 359 ~~~I-~vi~gd~e~l~~~~~l~~---~~~DvIvse~mg~-~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
..++ +++++|+.+... ++. ++||+|++..+-+ ...+...+..++..+.++|||||.++...
T Consensus 133 ~~~v~~~~~~d~~~~~~---~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQP---LGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHHEEEEEECCTTSSST---TTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhheeEEEeeeccCCC---CCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 0137 999999988651 234 7899999864322 22245578899999999999999998654
No 102
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.33 E-value=2.9e-12 Score=126.75 Aligned_cols=110 Identities=16% Similarity=0.243 Sum_probs=85.0
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.++++|||||||+|.+++.++++ + ..+|++||+++.+++.|+++++.+++. ++|+++++|+.+..
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~l 123 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ-------------DKVTILNGASQDLI 123 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG-------------GGEEEEESCHHHHG
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC-------------CceEEEECCHHHHH
Confidence 46789999999999999999985 2 359999999999999999999999986 78999999997743
Q ss_pred cccccC----CCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeecce
Q 006731 374 ESMQIQ----PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (633)
Q Consensus 374 ~~~~l~----~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~~t 424 (633)
.. ++ .++||+|++..... +-.....++..+ ++|||||+++.+...
T Consensus 124 ~~--~~~~~~~~~fD~V~~d~~~~---~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 124 PQ--LKKKYDVDTLDMVFLDHWKD---RYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp GG--TTTTSCCCCCSEEEECSCGG---GHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred HH--HHHhcCCCceEEEEEcCCcc---cchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 11 22 26899999754211 112233456666 999999999976543
No 103
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.33 E-value=2.5e-12 Score=135.77 Aligned_cols=111 Identities=20% Similarity=0.113 Sum_probs=89.1
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-cEEEEEcccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG-KMEVVQGMVEELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~-~I~vi~gd~e~l~~ 374 (633)
.++.+|||+|||+|.+++.+++.|+ +|+|||+|+.+++.|+++++.|++. + +++++++|+.++..
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~-------------~~~v~~i~~D~~~~l~ 217 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLE-------------QAPIRWICEDAMKFIQ 217 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCT-------------TSCEEEECSCHHHHHH
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCC-------------ccceEEEECcHHHHHH
Confidence 4678999999999999999999998 9999999999999999999999985 4 59999999988641
Q ss_pred ccccCCCcccEEEEecccccc-------cChhhHHHHHHHHhhcccCCcEEEe
Q 006731 375 SMQIQPHSVDVLVSEWMGYCL-------LYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L-------~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
......++||+||+++..+.. .....+..++..+.++|+|||.++.
T Consensus 218 ~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli 270 (332)
T 2igt_A 218 REERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLV 270 (332)
T ss_dssp HHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEE
T ss_pred HHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEE
Confidence 100014689999997642221 1234567889999999999999663
No 104
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.33 E-value=5.7e-12 Score=127.67 Aligned_cols=110 Identities=22% Similarity=0.276 Sum_probs=85.6
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEE
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~ 363 (633)
...+.+..... ++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|+++.. .+
T Consensus 43 ~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~------------------~~-- 99 (260)
T 2avn_A 43 LIGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV------------------KN-- 99 (260)
T ss_dssp HHHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC------------------SC--
T ss_pred HHHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC------------------CC--
Confidence 34445554432 788999999999999999999886 89999999999999887642 12
Q ss_pred EEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++.+++.+++ ++.++||+|++......+. ..+..++..+.++|||||.++...
T Consensus 100 ~~~~d~~~~~----~~~~~fD~v~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 100 VVEAKAEDLP----FPSGAFEAVLALGDVLSYV--ENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp EEECCTTSCC----SCTTCEEEEEECSSHHHHC--SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECcHHHCC----CCCCCEEEEEEcchhhhcc--ccHHHHHHHHHHHcCCCeEEEEEe
Confidence 7889999887 7778999999843211111 237889999999999999999654
No 105
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.33 E-value=3.6e-12 Score=126.47 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=85.8
Q ss_pred CCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
++.+|||||||+|.++..+|+.+. ..|+|||+|+.+++.|++++..+++ .++.++++|+.++...
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l--------------~nv~~~~~Da~~~l~~ 99 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL--------------SNLRVMCHDAVEVLHK 99 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC--------------SSEEEECSCHHHHHHH
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC--------------CcEEEEECCHHHHHHH
Confidence 568999999999999999998753 5899999999999999999999988 5799999999885210
Q ss_pred cccCCCcccEEEEecccccccChhh------HHHHHHHHhhcccCCcEEEeec
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESM------LSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~------l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.++.++||.|++....... .... .+.++..+.++|||||.++..+
T Consensus 100 -~~~~~~~d~v~~~~~~p~~-~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 100 -MIPDNSLRMVQLFFPDPWH-KARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp -HSCTTCEEEEEEESCCCCC-SGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -HcCCCChheEEEeCCCCcc-chhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 0457899999975321111 0111 1358999999999999998644
No 106
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.33 E-value=4.3e-13 Score=134.08 Aligned_cols=105 Identities=24% Similarity=0.187 Sum_probs=87.2
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||+|||+|.++..+++.| .+|+|+|+|+.+++.|+++++.+++. .+++++++|+.++.
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~-------------~~~~~~~~d~~~~~-- 140 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIA-------------DKIEFICGDFLLLA-- 140 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCG-------------GGEEEEESCHHHHG--
T ss_pred cCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCC-------------cCeEEEECChHHhc--
Confidence 378999999999999999999998 49999999999999999999999986 68999999999876
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+.++||+|++..+-+. .......+..+.++|+|||.++...
T Consensus 141 ---~~~~~D~v~~~~~~~~---~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 141 ---SFLKADVVFLSPPWGG---PDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp ---GGCCCSEEEECCCCSS---GGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred ---ccCCCCEEEECCCcCC---cchhhhHHHHHHhhcCCcceeHHHH
Confidence 3478999999754222 2233335566789999999977554
No 107
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.33 E-value=2.4e-12 Score=133.14 Aligned_cols=127 Identities=20% Similarity=0.241 Sum_probs=87.7
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCC-----------------------
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRP----------------------- 350 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~----------------------- 350 (633)
..++++|||||||+|.+++.+++. +..+|+|||+|+.|++.|++++...+......
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 357899999999999999999997 55699999999999999999876554210000
Q ss_pred ---------------------CCCCCCCCCCcEEEEEccccccccc-cccCCCcccEEEEeccccccc---ChhhHHHHH
Q 006731 351 ---------------------QSEGNINNAGKMEVVQGMVEELGES-MQIQPHSVDVLVSEWMGYCLL---YESMLSSVL 405 (633)
Q Consensus 351 ---------------------~~~~~~~~~~~I~vi~gd~e~l~~~-~~l~~~~~DvIvse~mg~~L~---~e~~l~~vl 405 (633)
........+.+|+++++|+...... ..+..++||+|+|..+...+. ....+..++
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 0000112236899999998754311 013457999999965432221 344678899
Q ss_pred HHHhhcccCCcEEEee
Q 006731 406 FARDQWLKPGGAILPD 421 (633)
Q Consensus 406 ~a~~r~LkpgG~lip~ 421 (633)
..+.++|+|||.++..
T Consensus 204 ~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 204 RRIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHHEEEEEEEEEE
T ss_pred HHHHHHhCCCcEEEEe
Confidence 9999999999999954
No 108
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.33 E-value=4e-12 Score=129.35 Aligned_cols=114 Identities=17% Similarity=0.165 Sum_probs=89.9
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHc-CC-CeEEEEeCCHH------HHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA-GA-SRVIAVEASEK------MAAVATQIAKDNDFWWDRPQSEGNINNA 359 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga-~~V~aVD~S~~------~~~~A~~~~~~ngl~~~~~~~~~~~~~~ 359 (633)
.+.....+.++.+|||||||+|.++..+++. |. .+|+|+|+|+. +++.|+++++.+++.
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~------------- 100 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG------------- 100 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG-------------
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC-------------
Confidence 3444445678899999999999999999988 54 59999999997 899999999988876
Q ss_pred CcEEEEEcc---ccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 360 GKMEVVQGM---VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 360 ~~I~vi~gd---~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.+++++++| ...++ ++.++||+|++..+-+.+ .....++..+.++++|||.++..
T Consensus 101 ~~v~~~~~d~~~~~~~~----~~~~~fD~v~~~~~l~~~---~~~~~~~~~~~~l~~~gG~l~~~ 158 (275)
T 3bkx_A 101 DRLTVHFNTNLSDDLGP----IADQHFDRVVLAHSLWYF---ASANALALLFKNMAAVCDHVDVA 158 (275)
T ss_dssp GGEEEECSCCTTTCCGG----GTTCCCSEEEEESCGGGS---SCHHHHHHHHHHHTTTCSEEEEE
T ss_pred CceEEEECChhhhccCC----CCCCCEEEEEEccchhhC---CCHHHHHHHHHHHhCCCCEEEEE
Confidence 789999998 34444 566899999986553333 33455777778888889999854
No 109
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.33 E-value=1.3e-12 Score=122.61 Aligned_cols=105 Identities=17% Similarity=0.127 Sum_probs=80.0
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
++.+|||+|||+|.++..+++.|+ +|+|+|+|+.+++.|++++..+++ +++++++|+.+.....
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~---------------~~~~~~~d~~~~~~~~ 104 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL---------------GARVVALPVEVFLPEA 104 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC---------------CCEEECSCHHHHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC---------------ceEEEeccHHHHHHhh
Confidence 678999999999999999999988 499999999999999999987653 5899999998742110
Q ss_pred ccCCCcccEEEEecccccccChhhHHHHHHHHh--hcccCCcEEEeec
Q 006731 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARD--QWLKPGGAILPDT 422 (633)
Q Consensus 377 ~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~--r~LkpgG~lip~~ 422 (633)
....++||+|++...-+ . ....++..+. ++|+|||.++...
T Consensus 105 ~~~~~~~D~i~~~~~~~-~----~~~~~~~~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 105 KAQGERFTVAFMAPPYA-M----DLAALFGELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp HHTTCCEEEEEECCCTT-S----CTTHHHHHHHHHTCEEEEEEEEEEE
T ss_pred hccCCceEEEEECCCCc-h----hHHHHHHHHHhhcccCCCcEEEEEe
Confidence 01124799999975421 2 2234444444 9999999998544
No 110
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.32 E-value=6.4e-12 Score=124.88 Aligned_cols=120 Identities=10% Similarity=0.153 Sum_probs=92.0
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~ 361 (633)
.+...+.......++.+|||||||+|..++.++++ + ..+|++||+++.+++.|+++++.+++.. ++
T Consensus 43 ~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~------------~~ 110 (221)
T 3dr5_A 43 QLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSP------------SR 110 (221)
T ss_dssp HHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCG------------GG
T ss_pred HHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCc------------Cc
Confidence 34444544433334559999999999999999986 2 3599999999999999999999988721 48
Q ss_pred EEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeecc
Q 006731 362 MEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (633)
Q Consensus 362 I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~~ 423 (633)
|+++++|+.++... ++.++||+|++... ......++..+.++|||||+++.+..
T Consensus 111 i~~~~gda~~~l~~--~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 111 VRFLLSRPLDVMSR--LANDSYQLVFGQVS------PMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp EEEECSCHHHHGGG--SCTTCEEEEEECCC------TTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred EEEEEcCHHHHHHH--hcCCCcCeEEEcCc------HHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 99999999876421 33578999997531 23456688899999999999996543
No 111
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.32 E-value=5.6e-12 Score=127.31 Aligned_cols=106 Identities=17% Similarity=0.203 Sum_probs=87.4
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.++++|||||||+|..+..++++ + ..+|++||+++.+++.|+++++.+++. ++|+++.+|+.+..
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~-------------~~v~~~~~d~~~~l 128 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD-------------QRVTLREGPALQSL 128 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT-------------TTEEEEESCHHHHH
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CcEEEEEcCHHHHH
Confidence 46789999999999999999987 2 459999999999999999999999986 79999999998743
Q ss_pred cccccC-CCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 374 ESMQIQ-PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~~l~-~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.. +. .++||+|++.. .......++..+.++|||||+++.+.
T Consensus 129 ~~--~~~~~~fD~V~~d~------~~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 129 ES--LGECPAFDLIFIDA------DKPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp HT--CCSCCCCSEEEECS------CGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred Hh--cCCCCCeEEEEECC------chHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 11 11 24899999743 22345678899999999999998654
No 112
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.32 E-value=2.1e-12 Score=125.72 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=84.8
Q ss_pred CCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|++++..+++ .+++++++++.++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~~v~~~~~d~~~~~-- 128 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKL--------------ENIEPVQSRVEEFP-- 128 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC--------------SSEEEEECCTTTSC--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CCeEEEecchhhCC--
Confidence 5789999999999999999987 345999999999999999999999888 45999999998865
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+.++||+|++..+ ..+..++..+.++|+|||.++..
T Consensus 129 ---~~~~~D~i~~~~~-------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 129 ---SEPPFDGVISRAF-------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp ---CCSCEEEEECSCS-------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred ---ccCCcCEEEEecc-------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 3478999997532 23578899999999999999854
No 113
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.32 E-value=1.1e-11 Score=121.95 Aligned_cols=109 Identities=13% Similarity=0.138 Sum_probs=86.3
Q ss_pred CCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
++.+|||||||+|.++..+++.. ..+|+|||+|+.+++.|++++..+++ .+++++++|+.+++..
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~--------------~~v~~~~~d~~~~~~~ 106 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV--------------PNIKLLWVDGSDLTDY 106 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC--------------SSEEEEECCSSCGGGT
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC--------------CCEEEEeCCHHHHHhh
Confidence 57899999999999999999884 35999999999999999999998887 6899999999886421
Q ss_pred cccCCCcccEEEEeccccccc--Chh---hHHHHHHHHhhcccCCcEEEee
Q 006731 376 MQIQPHSVDVLVSEWMGYCLL--YES---MLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~--~e~---~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++.++||+|++........ ++. ....++..+.++|+|||.++..
T Consensus 107 --~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 107 --FEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp --SCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred --cCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 3457899999864321100 000 2357889999999999999854
No 114
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.32 E-value=2.5e-12 Score=123.92 Aligned_cols=110 Identities=15% Similarity=0.072 Sum_probs=85.8
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a--Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~ 361 (633)
.+...+.... .+..+|||+|||+|.+++.++.. ++ +|+|+|+|+.|++.|++++..+|.. .+
T Consensus 38 ~fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~-------------~~ 101 (200)
T 3fzg_A 38 DFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTT-------------IK 101 (200)
T ss_dssp HHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCS-------------SE
T ss_pred HHHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCC-------------cc
Confidence 3444444432 45789999999999999999887 56 9999999999999999999999985 57
Q ss_pred EEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 362 MEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 362 I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
+.+ .+..... ++++||+|++.-+-+++ ...+..+..+.+.|+|||++|
T Consensus 102 v~~--~d~~~~~-----~~~~~DvVLa~k~LHlL---~~~~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 102 YRF--LNKESDV-----YKGTYDVVFLLKMLPVL---KQQDVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp EEE--ECCHHHH-----TTSEEEEEEEETCHHHH---HHTTCCHHHHHHTCEEEEEEE
T ss_pred EEE--ecccccC-----CCCCcChhhHhhHHHhh---hhhHHHHHHHHHHhCCCCEEE
Confidence 777 4444333 46889999987655544 344456668899999999998
No 115
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.32 E-value=4.1e-12 Score=126.86 Aligned_cols=104 Identities=19% Similarity=0.206 Sum_probs=87.2
Q ss_pred CCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
.++++|||||||+|.++..+++++ ..+|++||+++.+++.|+++++..++. ++|+++.+|+.+...
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~~~ 136 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFE-------------NQVRIIEGNALEQFE 136 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCT-------------TTEEEEESCGGGCHH
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CcEEEEECCHHHHHH
Confidence 467899999999999999999963 459999999999999999999999986 799999999987641
Q ss_pred -ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 375 -SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 375 -~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
. + .++||+|++... ......++..+.++|||||+++.+
T Consensus 137 ~~--~-~~~fD~V~~~~~------~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 137 NV--N-DKVYDMIFIDAA------KAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp HH--T-TSCEEEEEEETT------SSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred hh--c-cCCccEEEEcCc------HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 1 2 478999997531 234567899999999999999864
No 116
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.31 E-value=6.9e-12 Score=134.76 Aligned_cols=119 Identities=21% Similarity=0.236 Sum_probs=94.9
Q ss_pred HHHHHHHHhCC--CCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 006731 283 DSYRQAILENP--SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG 360 (633)
Q Consensus 283 ~~y~~aI~~~~--~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~ 360 (633)
..+.+.+.... ...++.+|||+|||+|.++..+++.|+ +|+|||+|+.+++.|++++..+++ .
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~--------------~ 281 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANAL--------------K 281 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTC--------------C
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC--------------C
Confidence 33444444322 235788999999999999999999987 999999999999999999999886 3
Q ss_pred cEEEEEccccccccccccCCCcccEEEEecccccc--cChhhHHHHHHHHhhcccCCcEEEee
Q 006731 361 KMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCL--LYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 361 ~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L--~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++++.+|+.+.. .+.++||+|+++..-+.. ........++..+.++|||||.++..
T Consensus 282 -v~~~~~D~~~~~----~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 282 -AQALHSDVDEAL----TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp -CEEEECSTTTTS----CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -eEEEEcchhhcc----ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 899999999876 445799999998542221 12356778999999999999999854
No 117
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.31 E-value=4.5e-12 Score=126.62 Aligned_cols=100 Identities=22% Similarity=0.257 Sum_probs=82.1
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc--
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL-- 372 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l-- 372 (633)
..++.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|++ +++++.+++.+.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~----------------------~~~~~~~d~~~~~~ 95 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEG----------------------KFNVVKSDAIEYLK 95 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHT----------------------TSEEECSCHHHHHH
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHh----------------------hcceeeccHHHHhh
Confidence 45678999999999999999999987 79999999999987763 367888998876
Q ss_pred ccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 373 GESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+ ++.++||+|++..+-+.+ ....+..++..+.++|||||.++...
T Consensus 96 ~----~~~~~fD~i~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 96 S----LPDKYLDGVMISHFVEHL-DPERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp T----SCTTCBSEEEEESCGGGS-CGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred h----cCCCCeeEEEECCchhhC-CcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 4 667899999996543333 23467899999999999999998643
No 118
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.31 E-value=8.8e-12 Score=129.84 Aligned_cols=120 Identities=14% Similarity=0.125 Sum_probs=88.5
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||||||+|.++..+++.+..+|+|+|+|+.|++.|+++....+.. .......+++++++|+++++..
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~ 105 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNR-------RDSEYIFSAEFITADSSKELLI 105 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSS-------SCC-CCCEEEEEECCTTTSCST
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhc-------ccccccceEEEEEecccccchh
Confidence 367899999999999999999876679999999999999999988654210 0000015799999999886411
Q ss_pred ccc--CCCcccEEEEecccccc-cChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 376 MQI--QPHSVDVLVSEWMGYCL-LYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 376 ~~l--~~~~~DvIvse~mg~~L-~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
..+ +.++||+|++..+-+.+ .....+..++..+.++|||||.++...
T Consensus 106 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 106 DKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp TTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 112 23589999986543322 455667899999999999999999653
No 119
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.31 E-value=9e-12 Score=125.28 Aligned_cols=107 Identities=15% Similarity=0.189 Sum_probs=87.3
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a--Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
.+.......++.+|||||||+|.++..+++. +. +|+|+|+|+.|++.|+++ . .+++++
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~-----~--------------~~~~~~ 83 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVN-VITGIDSDDDMLEKAADR-----L--------------PNTNFG 83 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTT-SEEEEESCHHHHHHHHHH-----S--------------TTSEEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHh-----C--------------CCcEEE
Confidence 3445555677899999999999999999988 44 899999999999998876 1 568999
Q ss_pred EccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 366 ~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.+|+++++ +.++||+|++..+.+ +-..+..++..+.++|||||.++...
T Consensus 84 ~~d~~~~~-----~~~~fD~v~~~~~l~---~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 84 KADLATWK-----PAQKADLLYANAVFQ---WVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp ECCTTTCC-----CSSCEEEEEEESCGG---GSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ECChhhcC-----ccCCcCEEEEeCchh---hCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 99998875 357899999865423 33567889999999999999998643
No 120
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.31 E-value=5.6e-12 Score=135.54 Aligned_cols=113 Identities=23% Similarity=0.399 Sum_probs=89.7
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhC-----C-CCCCCCCCCCCCCCCCcEEEEE
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDN-----D-FWWDRPQSEGNINNAGKMEVVQ 366 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~n-----g-l~~~~~~~~~~~~~~~~I~vi~ 366 (633)
..++.+|||||||+|.++..+++. | ..+|+|+|+|+.+++.|+++++.+ | +. ..++++++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~------------~~~v~~~~ 148 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPS------------RSNVRFLK 148 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTT------------CCCEEEEE
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccC------------CCceEEEE
Confidence 457899999999999999999886 2 349999999999999999988754 3 21 15799999
Q ss_pred ccccccccc--cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 367 GMVEELGES--MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 367 gd~e~l~~~--~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+|++++... ..++.++||+|++..+-+ +...+..++..+.++|||||.++...
T Consensus 149 ~d~~~l~~~~~~~~~~~~fD~V~~~~~l~---~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 149 GFIENLATAEPEGVPDSSVDIVISNCVCN---LSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp SCTTCGGGCBSCCCCTTCEEEEEEESCGG---GCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccHHHhhhcccCCCCCCCEEEEEEccchh---cCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 999987210 016778999999976533 33457899999999999999999653
No 121
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.31 E-value=5.6e-12 Score=124.39 Aligned_cols=108 Identities=19% Similarity=0.253 Sum_probs=86.5
Q ss_pred CCCCEEEEECCCcchHHHHHHHcC--CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAG--ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aG--a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.++++|||||||+|..+..++++- ..+|+++|+++.+++.|++++...++. ++++++++|+.+..
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~~ 123 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN-------------DRVEVRTGLALDSL 123 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT-------------TTEEEEESCHHHHH
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CcEEEEEcCHHHHH
Confidence 467899999999999999999982 349999999999999999999999986 78999999997653
Q ss_pred cccccC-CCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 374 ESMQIQ-PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~~l~-~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
...... .++||+|++... ......++..+.++|+|||.++.+.
T Consensus 124 ~~~~~~~~~~fD~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 124 QQIENEKYEPFDFIFIDAD------KQNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp HHHHHTTCCCCSEEEECSC------GGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred HHHHhcCCCCcCEEEEcCC------cHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 110000 157999997532 2345678899999999999998654
No 122
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.30 E-value=1.3e-11 Score=123.01 Aligned_cols=108 Identities=19% Similarity=0.229 Sum_probs=84.1
Q ss_pred CCCCCCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccc
Q 006731 292 NPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (633)
Q Consensus 292 ~~~~~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~ 369 (633)
...+.++.+|||+|||+|.++..+++. | ..+|+|||+|+.+++.+.++++.+ .+++++.+|+
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~----------------~~v~~~~~d~ 135 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR----------------TNIIPVIEDA 135 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC----------------TTEEEECSCT
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc----------------CCeEEEEccc
Confidence 344667899999999999999999987 3 469999999999988888877764 4699999999
Q ss_pred cccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 370 EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 370 e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.+... ...+.++||+|++... .......++..+.++|||||.++.+
T Consensus 136 ~~~~~-~~~~~~~~D~V~~~~~-----~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 136 RHPHK-YRMLIAMVDVIFADVA-----QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp TCGGG-GGGGCCCEEEEEECCC-----CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CChhh-hcccCCcEEEEEEcCC-----CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 87421 0034578999998643 2233456688899999999999963
No 123
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.30 E-value=1.2e-11 Score=118.22 Aligned_cols=102 Identities=22% Similarity=0.242 Sum_probs=84.4
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
+.++.+|||||||+|.++..+++.|. +|+|+|+++.+++.|+++. .+++++++++.+++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~-------------------~~~~~~~~d~~~~~- 102 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF-------------------PEARWVVGDLSVDQ- 102 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-------------------TTSEEEECCTTTSC-
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC-------------------CCCcEEEcccccCC-
Confidence 34788999999999999999999976 9999999999998888764 34789999999877
Q ss_pred ccccCCCcccEEEEe-cccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 375 SMQIQPHSVDVLVSE-WMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 375 ~~~l~~~~~DvIvse-~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++.++||+|++. .+.+. ........++..+.++|+|||.++..
T Consensus 103 ---~~~~~~D~i~~~~~~~~~-~~~~~~~~~l~~~~~~l~~~G~l~~~ 146 (195)
T 3cgg_A 103 ---ISETDFDLIVSAGNVMGF-LAEDGREPALANIHRALGADGRAVIG 146 (195)
T ss_dssp ---CCCCCEEEEEECCCCGGG-SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CCCCceeEEEECCcHHhh-cChHHHHHHHHHHHHHhCCCCEEEEE
Confidence 667899999986 32222 23456788999999999999999853
No 124
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.30 E-value=1.1e-11 Score=122.26 Aligned_cols=109 Identities=17% Similarity=0.220 Sum_probs=85.1
Q ss_pred CCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
++.+|||||||+|.++..+|+.. ..+|+|||+|+.+++.|++++..+++ .+++++++|+.++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~--------------~nv~~~~~d~~~l~~~ 103 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA--------------QNVKLLNIDADTLTDV 103 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC--------------SSEEEECCCGGGHHHH
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC--------------CCEEEEeCCHHHHHhh
Confidence 56899999999999999999873 35999999999999999999998887 6799999999886421
Q ss_pred cccCCCcccEEEEeccccccc--Ch-h--hHHHHHHHHhhcccCCcEEEee
Q 006731 376 MQIQPHSVDVLVSEWMGYCLL--YE-S--MLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~--~e-~--~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++.+.||.|++........ ++ . ....++..+.++|||||.++..
T Consensus 104 --~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 104 --FEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp --CCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred --cCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 4567899998642111000 00 0 1367889999999999999854
No 125
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.30 E-value=1e-11 Score=133.26 Aligned_cols=119 Identities=14% Similarity=0.178 Sum_probs=92.7
Q ss_pred HHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 286 ~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
.+.+.......++.+|||+|||+|.+++.+++.+ ..+|+|||+|+.+++.|++++..|++. ...++++
T Consensus 211 ~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~-----------~~~~v~~ 279 (375)
T 4dcm_A 211 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE-----------ALDRCEF 279 (375)
T ss_dssp HHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGG-----------GGGGEEE
T ss_pred HHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCC-----------cCceEEE
Confidence 3455666666677999999999999999999995 469999999999999999999998874 0025888
Q ss_pred EEccccccccccccCCCcccEEEEecccccc--cChhhHHHHHHHHhhcccCCcEEEe
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCL--LYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L--~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+.+|+.+. ++.++||+|++++.-+.. ........++..+.++|||||.++.
T Consensus 280 ~~~D~~~~-----~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 280 MINNALSG-----VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp EECSTTTT-----CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred Eechhhcc-----CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 99999873 456799999998542211 1122345789999999999999985
No 126
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.30 E-value=2.7e-12 Score=130.21 Aligned_cols=108 Identities=31% Similarity=0.304 Sum_probs=86.5
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
+.+.+.......++.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|+++ .++++
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~--------------------~~~~~ 80 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVH--------------------PQVEW 80 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCC--------------------TTEEE
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhc--------------------cCCEE
Confidence 444555544567889999999999999999999776 999999999988655432 36999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+++|+++++ ++.++||+|++..+-+ +-..+..++..+.++|| ||.++..
T Consensus 81 ~~~d~~~~~----~~~~~fD~v~~~~~l~---~~~~~~~~l~~~~~~Lk-gG~~~~~ 129 (261)
T 3ege_A 81 FTGYAENLA----LPDKSVDGVISILAIH---HFSHLEKSFQEMQRIIR-DGTIVLL 129 (261)
T ss_dssp ECCCTTSCC----SCTTCBSEEEEESCGG---GCSSHHHHHHHHHHHBC-SSCEEEE
T ss_pred EECchhhCC----CCCCCEeEEEEcchHh---hccCHHHHHHHHHHHhC-CcEEEEE
Confidence 999999988 7778999999865432 22567899999999999 9977643
No 127
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.30 E-value=1.5e-11 Score=126.60 Aligned_cols=126 Identities=18% Similarity=0.242 Sum_probs=90.3
Q ss_pred HHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeC-CHHHHHHHHHHHHhC-----CCCCCCCCCCCCC
Q 006731 283 DSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEA-SEKMAAVATQIAKDN-----DFWWDRPQSEGNI 356 (633)
Q Consensus 283 ~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~-S~~~~~~A~~~~~~n-----gl~~~~~~~~~~~ 356 (633)
....+.+.......++++|||||||+|.+++.+++.|+.+|+|+|+ |+.+++.|+++++.| ++. .
T Consensus 65 ~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~---------~ 135 (281)
T 3bzb_A 65 RALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSE---------T 135 (281)
T ss_dssp HHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------------
T ss_pred HHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccc---------c
Confidence 3455566665555688999999999999999999999889999999 899999999999544 331 0
Q ss_pred CCCCcEEEEEccccccccccc--cCCCcccEEEEecccccccChhhHHHHHHHHhhccc---C--CcEEEe
Q 006731 357 NNAGKMEVVQGMVEELGESMQ--IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLK---P--GGAILP 420 (633)
Q Consensus 357 ~~~~~I~vi~gd~e~l~~~~~--l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~Lk---p--gG~lip 420 (633)
...++++++..+..+...... ++.++||+|++..+ +.+...+..++..+.++|+ | ||.++.
T Consensus 136 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dv---l~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 136 VKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADL---LSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp ---CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESC---CSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred CCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCc---ccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 001368888766544211100 13578999997332 4455678889999999999 9 998663
No 128
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.29 E-value=1.8e-11 Score=122.36 Aligned_cols=114 Identities=17% Similarity=0.220 Sum_probs=89.2
Q ss_pred HHHHHh---CCCCCCCCEEEEECCCcchHHHHHHHc-CC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 006731 286 RQAILE---NPSLMKGAVVMDIGCGTGILSLFAAQA-GA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG 360 (633)
Q Consensus 286 ~~aI~~---~~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~ 360 (633)
..+|.+ .+.+.+|.+|||+|||+|.++..+|+. |. .+|+|||+++.|++.|+++++.. .
T Consensus 63 aa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~----------------~ 126 (233)
T 4df3_A 63 AAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR----------------R 126 (233)
T ss_dssp HHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC----------------T
T ss_pred HHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh----------------c
Confidence 345654 356789999999999999999999997 54 69999999999999998876543 5
Q ss_pred cEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 361 KMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 361 ~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++..+.++........ ...+.+|+|++... +......++.++.++|||||.++..
T Consensus 127 ni~~V~~d~~~p~~~~-~~~~~vDvVf~d~~-----~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 127 NIFPILGDARFPEKYR-HLVEGVDGLYADVA-----QPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp TEEEEESCTTCGGGGT-TTCCCEEEEEECCC-----CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEEeccCccccc-cccceEEEEEEecc-----CChhHHHHHHHHHHhccCCCEEEEE
Confidence 7889999887654221 34578999987532 2345677899999999999999853
No 129
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.29 E-value=1.1e-11 Score=129.78 Aligned_cols=111 Identities=22% Similarity=0.135 Sum_probs=88.3
Q ss_pred HHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCC--CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEE
Q 006731 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA--SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 286 ~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa--~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~ 363 (633)
...+.......++.+|||||||+|.++..+++.+. .+|+|+|+|+.+++.|+++++.+++ .+++
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~--------------~~v~ 129 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI--------------ENVI 129 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC--------------CSEE
T ss_pred HHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CCeE
Confidence 33444445667899999999999999999999854 4699999999999999999999888 4599
Q ss_pred EEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeecc
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~~ 423 (633)
++.+|+.+.. .+.++||+|++..+...+. ..+.+.|||||+++....
T Consensus 130 ~~~~d~~~~~----~~~~~fD~Iv~~~~~~~~~---------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 130 FVCGDGYYGV----PEFSPYDVIFVTVGVDEVP---------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EEESCGGGCC----GGGCCEEEEEECSBBSCCC---------HHHHHHEEEEEEEEEEBC
T ss_pred EEECChhhcc----ccCCCeEEEEEcCCHHHHH---------HHHHHhcCCCcEEEEEEC
Confidence 9999998854 3347899999975433221 456789999999987643
No 130
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.29 E-value=5.6e-12 Score=128.96 Aligned_cols=100 Identities=24% Similarity=0.355 Sum_probs=83.2
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
...++.+|||||||+|.++..+++.|. +|+|+|+|+.|++.|++.. .+++++.+|+++++
T Consensus 54 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-------------------~~~~~~~~d~~~~~ 113 (279)
T 3ccf_A 54 NPQPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY-------------------PHLHFDVADARNFR 113 (279)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-------------------TTSCEEECCTTTCC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC-------------------CCCEEEECChhhCC
Confidence 356788999999999999999999765 9999999999999888754 35788999999887
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+ .++||+|++..+-+ +-..+..++..+.++|||||.++..
T Consensus 114 ----~-~~~fD~v~~~~~l~---~~~d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 114 ----V-DKPLDAVFSNAMLH---WVKEPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp ----C-SSCEEEEEEESCGG---GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----c-CCCcCEEEEcchhh---hCcCHHHHHHHHHHhcCCCcEEEEE
Confidence 5 47999999865422 2245778999999999999999854
No 131
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.29 E-value=7.8e-12 Score=125.95 Aligned_cols=108 Identities=26% Similarity=0.364 Sum_probs=90.2
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
.+.......++.+|||+|||+|.++..+++. | ..+|+++|.++.+++.|+++++.+++. ++++++
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~-------------~~v~~~ 150 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD-------------DRVTIK 150 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT-------------TTEEEE
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC-------------CceEEE
Confidence 4455556778999999999999999999998 5 469999999999999999999999986 679999
Q ss_pred EccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 366 ~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++|+.+. ++.++||+|++.+. ....++..+.++|+|||.++..
T Consensus 151 ~~d~~~~-----~~~~~~D~v~~~~~--------~~~~~l~~~~~~L~~gG~l~~~ 193 (255)
T 3mb5_A 151 LKDIYEG-----IEEENVDHVILDLP--------QPERVVEHAAKALKPGGFFVAY 193 (255)
T ss_dssp CSCGGGC-----CCCCSEEEEEECSS--------CGGGGHHHHHHHEEEEEEEEEE
T ss_pred ECchhhc-----cCCCCcCEEEECCC--------CHHHHHHHHHHHcCCCCEEEEE
Confidence 9999865 35678999998532 2345778889999999999853
No 132
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.29 E-value=1.3e-11 Score=120.60 Aligned_cols=100 Identities=26% Similarity=0.296 Sum_probs=82.6
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
+.++.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|++++ + +.++.+++.+++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~---~-----------------~~~~~~d~~~~~- 98 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL---G-----------------RPVRTMLFHQLD- 98 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---T-----------------SCCEECCGGGCC-
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc---C-----------------CceEEeeeccCC-
Confidence 34688999999999999999999987 9999999999999998875 1 456788988876
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+.++||+|++..+-+.+ ....+..++..+.++|||||.++..
T Consensus 99 ----~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 99 ----AIDAYDAVWAHACLLHV-PRDELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp ----CCSCEEEEEECSCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----CCCcEEEEEecCchhhc-CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 35899999986543322 2346788999999999999999864
No 133
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=1.2e-11 Score=123.74 Aligned_cols=107 Identities=15% Similarity=0.045 Sum_probs=85.2
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
..++.+|||||||+|.++..+++.+. +|+|||+|+.+++.|+++.. . .+++++++|+.++..
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~---~--------------~~~~~~~~d~~~~~~ 115 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENT---A--------------ANISYRLLDGLVPEQ 115 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSC---C--------------TTEEEEECCTTCHHH
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCc---c--------------cCceEEECccccccc
Confidence 56788999999999999999999988 99999999999999988762 1 579999999998762
Q ss_pred ccccC-CCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 375 SMQIQ-PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 375 ~~~l~-~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
...+. ...||+|++..+.+.+ .......++..+.++|||||.++.
T Consensus 116 ~~~~~~~~~~d~v~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i 161 (245)
T 3ggd_A 116 AAQIHSEIGDANIYMRTGFHHI-PVEKRELLGQSLRILLGKQGAMYL 161 (245)
T ss_dssp HHHHHHHHCSCEEEEESSSTTS-CGGGHHHHHHHHHHHHTTTCEEEE
T ss_pred ccccccccCccEEEEcchhhcC-CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 11011 1248999997654443 334678899999999999999774
No 134
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.28 E-value=6.6e-12 Score=123.97 Aligned_cols=106 Identities=19% Similarity=0.191 Sum_probs=86.9
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.++++|||||||+|..+..+++. + ..+|+++|+++.+++.|+++++.+++. ++++++++++.+..
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~~ 129 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS-------------DKIGLRLSPAKDTL 129 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT-------------TTEEEEESCHHHHH
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC-------------CceEEEeCCHHHHH
Confidence 46789999999999999999987 2 459999999999999999999999986 78999999997653
Q ss_pred cccccCC----CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 374 ESMQIQP----HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~~l~~----~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.. ++. ++||+|++.. .......++..+.++|+|||.++.+.
T Consensus 130 ~~--~~~~~~~~~fD~v~~~~------~~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 130 AE--LIHAGQAWQYDLIYIDA------DKANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp HH--HHTTTCTTCEEEEEECS------CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HH--hhhccCCCCccEEEECC------CHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 11 111 6899999643 12446778899999999999999554
No 135
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.28 E-value=2.8e-12 Score=120.89 Aligned_cols=97 Identities=16% Similarity=0.193 Sum_probs=81.7
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
..++.+|||||||+|.++..+++.+. +|+|+|+++.+++.|+++ . .+++++.++ ++
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~--------------~~v~~~~~d---~~- 70 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK-----F--------------DSVITLSDP---KE- 70 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH-----C--------------TTSEEESSG---GG-
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh-----C--------------CCcEEEeCC---CC-
Confidence 45778999999999999999999986 999999999999998887 2 678999998 44
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++.++||+|++..+-+ +...+..++..+.++|||||.++..
T Consensus 71 ---~~~~~~D~v~~~~~l~---~~~~~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 71 ---IPDNSVDFILFANSFH---DMDDKQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp ---SCTTCEEEEEEESCST---TCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CCCCceEEEEEccchh---cccCHHHHHHHHHHhcCCCCEEEEE
Confidence 5678999999865433 3346788999999999999999854
No 136
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.28 E-value=2.2e-11 Score=124.66 Aligned_cols=119 Identities=19% Similarity=0.248 Sum_probs=92.6
Q ss_pred hHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 006731 282 TDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG 360 (633)
Q Consensus 282 ~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~ 360 (633)
++...+.+..... .++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++++.+++ .
T Consensus 95 te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~--------------~ 159 (276)
T 2b3t_A 95 TECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI--------------K 159 (276)
T ss_dssp HHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC--------------C
T ss_pred HHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--------------C
Confidence 4445555555433 56789999999999999999976 445999999999999999999998887 5
Q ss_pred cEEEEEccccccccccccCCCcccEEEEeccccccc-----------Ch------------hhHHHHHHHHhhcccCCcE
Q 006731 361 KMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLL-----------YE------------SMLSSVLFARDQWLKPGGA 417 (633)
Q Consensus 361 ~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~-----------~e------------~~l~~vl~a~~r~LkpgG~ 417 (633)
+++++++|+.+.. +.++||+|++++. |... ++ ..+..++..+.++|+|||.
T Consensus 160 ~v~~~~~d~~~~~-----~~~~fD~Iv~npP-y~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~ 233 (276)
T 2b3t_A 160 NIHILQSDWFSAL-----AGQQFAMIVSNPP-YIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGF 233 (276)
T ss_dssp SEEEECCSTTGGG-----TTCCEEEEEECCC-CBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEE
T ss_pred ceEEEEcchhhhc-----ccCCccEEEECCC-CCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCE
Confidence 7999999998743 3578999999742 1111 11 2457788999999999999
Q ss_pred EEee
Q 006731 418 ILPD 421 (633)
Q Consensus 418 lip~ 421 (633)
++..
T Consensus 234 l~~~ 237 (276)
T 2b3t_A 234 LLLE 237 (276)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
No 137
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.28 E-value=6.5e-12 Score=129.26 Aligned_cols=126 Identities=17% Similarity=0.143 Sum_probs=82.2
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCC--CCC---CCCC-----------CC
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRP--QSE---GNIN-----------NA 359 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~--~~~---~~~~-----------~~ 359 (633)
.++.+|||||||+|.++..+++.+..+|+|||+|+.|++.|+++++...-..... ..+ ..+. ..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 4788999999999997766666444599999999999999988765321000000 000 0000 00
Q ss_pred CcEEEEEccccc-cccc-cccCCCcccEEEEecccccccC-hhhHHHHHHHHhhcccCCcEEEee
Q 006731 360 GKMEVVQGMVEE-LGES-MQIQPHSVDVLVSEWMGYCLLY-ESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 360 ~~I~vi~gd~e~-l~~~-~~l~~~~~DvIvse~mg~~L~~-e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
..++++++|+.+ ++.. ..++.++||+|++..+.+.+.. ...+..++..+.++|||||.++..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 126788889887 4300 0133467999999754332211 456889999999999999999975
No 138
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.27 E-value=2.6e-11 Score=131.76 Aligned_cols=120 Identities=18% Similarity=0.163 Sum_probs=89.1
Q ss_pred HHHHHhCCCCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHH-------HHHHHhCCCCCCCCCCCCCCC
Q 006731 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVA-------TQIAKDNDFWWDRPQSEGNIN 357 (633)
Q Consensus 286 ~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A-------~~~~~~ngl~~~~~~~~~~~~ 357 (633)
...+.....+.++.+|||||||+|.+++.+|+. |+.+|+|||+++.+++.| +++++..|+..
T Consensus 231 v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~---------- 300 (433)
T 1u2z_A 231 LSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRL---------- 300 (433)
T ss_dssp HHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCC----------
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCC----------
Confidence 344445556778999999999999999999986 777899999999999988 88888888310
Q ss_pred CCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 358 NAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 358 ~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.+|++++++............++||+|++... + +...+..++..+.+.|||||.++..
T Consensus 301 --~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~---l-~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 301 --NNVEFSLKKSFVDNNRVAELIPQCDVILVNNF---L-FDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp --CCEEEEESSCSTTCHHHHHHGGGCSEEEECCT---T-CCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred --CceEEEEcCccccccccccccCCCCEEEEeCc---c-ccccHHHHHHHHHHhCCCCeEEEEe
Confidence 68999998543211000011368999997532 2 2246777889999999999999854
No 139
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.27 E-value=1.7e-11 Score=123.37 Aligned_cols=108 Identities=26% Similarity=0.279 Sum_probs=89.8
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCcEEE
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDN-DFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~n-gl~~~~~~~~~~~~~~~~I~v 364 (633)
.+.......++.+|||+|||+|.++..+++. | ..+|+++|.++.+++.|+++++.+ +. .++++
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~--------------~~v~~ 152 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV--------------ENVRF 152 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC--------------CCEEE
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC--------------CCEEE
Confidence 3444455678899999999999999999998 5 469999999999999999999887 74 78999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+++|+.+.+ ++.++||+|++.+. ....++..+.++|+|||.++..
T Consensus 153 ~~~d~~~~~----~~~~~~D~v~~~~~--------~~~~~l~~~~~~L~~gG~l~~~ 197 (258)
T 2pwy_A 153 HLGKLEEAE----LEEAAYDGVALDLM--------EPWKVLEKAALALKPDRFLVAY 197 (258)
T ss_dssp EESCGGGCC----CCTTCEEEEEEESS--------CGGGGHHHHHHHEEEEEEEEEE
T ss_pred EECchhhcC----CCCCCcCEEEECCc--------CHHHHHHHHHHhCCCCCEEEEE
Confidence 999999875 66678999998531 2346788889999999999854
No 140
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.26 E-value=2.2e-11 Score=119.26 Aligned_cols=109 Identities=20% Similarity=0.178 Sum_probs=84.7
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHcC-C-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAG-A-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aG-a-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
..+.......++.+|||||||+|.++..+++.+ . .+|+++|.++.+++.|++++..+++ .++++
T Consensus 67 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------~~v~~ 132 (215)
T 2yxe_A 67 GMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY--------------DNVIV 132 (215)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC--------------TTEEE
T ss_pred HHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CCeEE
Confidence 344444456788999999999999999999985 2 5999999999999999999988887 56999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+.+++.... ...++||+|++....+.+. ..+.++|||||.++...
T Consensus 133 ~~~d~~~~~----~~~~~fD~v~~~~~~~~~~---------~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 133 IVGDGTLGY----EPLAPYDRIYTTAAGPKIP---------EPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp EESCGGGCC----GGGCCEEEEEESSBBSSCC---------HHHHHTEEEEEEEEEEE
T ss_pred EECCcccCC----CCCCCeeEEEECCchHHHH---------HHHHHHcCCCcEEEEEE
Confidence 999985432 1246899999864322211 36788999999988543
No 141
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.26 E-value=2.3e-11 Score=129.19 Aligned_cols=120 Identities=24% Similarity=0.183 Sum_probs=95.2
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcC--CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAG--ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aG--a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I 362 (633)
...++.......++.+|||+|||+|.+++.++..+ ..+|+|+|+++.+++.|+++++.+|+ .+|
T Consensus 191 la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~--------------~~i 256 (354)
T 3tma_A 191 LAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL--------------SWI 256 (354)
T ss_dssp HHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC--------------TTC
T ss_pred HHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC--------------Cce
Confidence 44555555566788999999999999999999974 35999999999999999999999887 579
Q ss_pred EEEEccccccccccccCCCcccEEEEecc-cccccC----hhhHHHHHHHHhhcccCCcEEEeec
Q 006731 363 EVVQGMVEELGESMQIQPHSVDVLVSEWM-GYCLLY----ESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 363 ~vi~gd~e~l~~~~~l~~~~~DvIvse~m-g~~L~~----e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+++++|+.+++ .+...||+||+++. |..+.. ......++..+.++|+|||.++..+
T Consensus 257 ~~~~~D~~~~~----~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 257 RFLRADARHLP----RFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp EEEECCGGGGG----GTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred EEEeCChhhCc----cccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99999999987 55567999999853 221111 1224678899999999999998654
No 142
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.26 E-value=4.4e-12 Score=125.84 Aligned_cols=91 Identities=21% Similarity=0.195 Sum_probs=77.7
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccc-ccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV-EELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~-e~l~~ 374 (633)
.++.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|+++ . .+++++++|+ +.++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~--------------~~~~~~~~d~~~~~~- 105 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARAN-----A--------------PHADVYEWNGKGELP- 105 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHH-----C--------------TTSEEEECCSCSSCC-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHh-----C--------------CCceEEEcchhhccC-
Confidence 5789999999999999999999987 999999999999999877 2 6789999999 4555
Q ss_pred ccccC-CCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 375 SMQIQ-PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 375 ~~~l~-~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
++ .++||+|++.. .+..++..+.++|||||.++
T Consensus 106 ---~~~~~~fD~v~~~~---------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 106 ---AGLGAPFGLIVSRR---------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ---TTCCCCEEEEEEES---------CCSGGGGGHHHHEEEEEEEE
T ss_pred ---CcCCCCEEEEEeCC---------CHHHHHHHHHHHcCCCcEEE
Confidence 55 68999999851 23456778899999999999
No 143
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.26 E-value=1.3e-11 Score=126.56 Aligned_cols=117 Identities=12% Similarity=0.077 Sum_probs=91.4
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a--Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
..++.+|||+|||+|..+..+++. +..+|+|+|+++.+++.++++++.+|+ .+++++++|+.++
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~--------------~~v~~~~~D~~~~ 146 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV--------------LNTIIINADMRKY 146 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC--------------CSEEEEESCHHHH
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC--------------CcEEEEeCChHhc
Confidence 567899999999999999999884 546999999999999999999999887 6799999999887
Q ss_pred ccccccCCCcccEEEEeccccc--ccC-------------hhhHHHHHHHHhhcccCCcEEEeeccee
Q 006731 373 GESMQIQPHSVDVLVSEWMGYC--LLY-------------ESMLSSVLFARDQWLKPGGAILPDTATM 425 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~~--L~~-------------e~~l~~vl~a~~r~LkpgG~lip~~~t~ 425 (633)
......+.++||+|++....+. ... ......++..+.++|||||.++.++|++
T Consensus 147 ~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 147 KDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred chhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 6110002468999998743211 110 1234678999999999999999888765
No 144
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.26 E-value=5.3e-12 Score=123.80 Aligned_cols=103 Identities=24% Similarity=0.337 Sum_probs=80.9
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
..++.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|+++ .++.++.+++.++..
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~--------------------~~~~~~~~~~~~~~~ 108 (227)
T 3e8s_A 50 GRQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA--------------------GAGEVHLASYAQLAE 108 (227)
T ss_dssp HTCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT--------------------CSSCEEECCHHHHHT
T ss_pred cCCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh--------------------cccccchhhHHhhcc
Confidence 34679999999999999999999987 899999999999888865 235678888888721
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
....+..+||+|++..+-+ ...+..++..+.++|||||.++...
T Consensus 109 ~~~~~~~~fD~v~~~~~l~----~~~~~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 109 AKVPVGKDYDLICANFALL----HQDIIELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp TCSCCCCCEEEEEEESCCC----SSCCHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccccCCCccEEEECchhh----hhhHHHHHHHHHHHhCCCeEEEEEe
Confidence 1112335699999864322 3466789999999999999999654
No 145
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.26 E-value=1.3e-11 Score=126.59 Aligned_cols=101 Identities=17% Similarity=0.162 Sum_probs=85.7
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
+.++.+|||+|||+|.+++.+|+. ++.+|+|||+|+.+++.|+++++.|++ .+++++++|+.+++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l--------------~~~~~~~~d~~~~~ 182 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL--------------NNVIPILADNRDVE 182 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC--------------SSEEEEESCGGGCC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CCEEEEECChHHcC
Confidence 567899999999999999999998 466999999999999999999999998 56889999999874
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
. .++||+|++.... ....++..+.+.|+|||+++.+
T Consensus 183 ----~-~~~~D~Vi~d~p~-------~~~~~l~~~~~~LkpgG~l~~s 218 (272)
T 3a27_A 183 ----L-KDVADRVIMGYVH-------KTHKFLDKTFEFLKDRGVIHYH 218 (272)
T ss_dssp ----C-TTCEEEEEECCCS-------SGGGGHHHHHHHEEEEEEEEEE
T ss_pred ----c-cCCceEEEECCcc-------cHHHHHHHHHHHcCCCCEEEEE
Confidence 3 4689999986532 2345677778899999999843
No 146
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.25 E-value=1.2e-11 Score=126.54 Aligned_cols=108 Identities=18% Similarity=0.214 Sum_probs=86.8
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCcEEE
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDN-DFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~n-gl~~~~~~~~~~~~~~~~I~v 364 (633)
.+.......++.+|||+|||+|.++..+++. + ..+|+|+|+++.+++.|+++++.+ |. .++++
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~--------------~~v~~ 166 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI--------------GNVRT 166 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC--------------TTEEE
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC--------------CcEEE
Confidence 4445556778899999999999999999987 2 359999999999999999999888 75 68999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+++|+.+ . ++.++||+|++.+. ....++..+.++|||||.++...
T Consensus 167 ~~~d~~~-~----~~~~~fD~Vi~~~~--------~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 167 SRSDIAD-F----ISDQMYDAVIADIP--------DPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp ECSCTTT-C----CCSCCEEEEEECCS--------CGGGSHHHHHHTEEEEEEEEEEE
T ss_pred EECchhc-c----CcCCCccEEEEcCc--------CHHHHHHHHHHHcCCCCEEEEEe
Confidence 9999987 3 45678999998431 23467888899999999998654
No 147
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.25 E-value=1.5e-11 Score=132.76 Aligned_cols=116 Identities=22% Similarity=0.215 Sum_probs=92.4
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCC-CCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDF-WWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl-~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
.++++|||+|||+|.+++.+++.|+++|+|||+|+.+++.|+++++.|++ . ++++++++|+.++..
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~-------------~~v~~~~~D~~~~~~ 285 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDL-------------SKAEFVRDDVFKLLR 285 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCG-------------GGEEEEESCHHHHHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-------------cceEEEECCHHHHHH
Confidence 47889999999999999999999888999999999999999999999998 5 689999999988641
Q ss_pred ccccCCCcccEEEEeccccc------ccChhhHHHHHHHHhhcccCCcEEEeecce
Q 006731 375 SMQIQPHSVDVLVSEWMGYC------LLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~------L~~e~~l~~vl~a~~r~LkpgG~lip~~~t 424 (633)
.......+||+|++.+.-+. ......+..++....++|+|||+++.+++.
T Consensus 286 ~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 286 TYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp HHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 11011368999999753211 111145677888889999999999966543
No 148
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.25 E-value=1.7e-11 Score=120.02 Aligned_cols=105 Identities=21% Similarity=0.239 Sum_probs=86.0
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.++++|||||||+|..++.++++ + ..+|+++|+++.+++.|+++++..++. ++++++++|+.+..
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~~ 121 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI-------------DRVELQVGDPLGIA 121 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG-------------GGEEEEESCHHHHH
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC-------------ceEEEEEecHHHHh
Confidence 35689999999999999999987 2 359999999999999999999988876 78999999998752
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeecc
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~~ 423 (633)
. ...+ ||+|++... ......++..+.++|||||.++.+..
T Consensus 122 ~---~~~~-fD~v~~~~~------~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 122 A---GQRD-IDILFMDCD------VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp T---TCCS-EEEEEEETT------TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred c---cCCC-CCEEEEcCC------hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 1 2235 999997521 23457789999999999999997543
No 149
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.25 E-value=1.3e-11 Score=124.31 Aligned_cols=120 Identities=14% Similarity=0.097 Sum_probs=86.3
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHc---CCCeEEEEeCCHHHHHHHHHHHHhC---CCCCCCCCCCCCCCCCCc
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA---GASRVIAVEASEKMAAVATQIAKDN---DFWWDRPQSEGNINNAGK 361 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a---Ga~~V~aVD~S~~~~~~A~~~~~~n---gl~~~~~~~~~~~~~~~~ 361 (633)
.+.......++.+|||+|||+|.+++.+++. +..+|+|+|+|+.+++.|++++..+ ++. .+
T Consensus 42 ~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~-------------~~ 108 (250)
T 1o9g_A 42 RALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLT-------------AR 108 (250)
T ss_dssp HHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHH-------------HH
T ss_pred HHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccc-------------cc
Confidence 3343333346789999999999999999886 2348999999999999999988766 442 22
Q ss_pred -------------------------EE-------------EEEcccccccccccc-CCCcccEEEEecc-cccccC----
Q 006731 362 -------------------------ME-------------VVQGMVEELGESMQI-QPHSVDVLVSEWM-GYCLLY---- 397 (633)
Q Consensus 362 -------------------------I~-------------vi~gd~e~l~~~~~l-~~~~~DvIvse~m-g~~L~~---- 397 (633)
++ ++++|+.+....... ...+||+|++++. .+....
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~ 188 (250)
T 1o9g_A 109 ELERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQV 188 (250)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCC
T ss_pred chhhhhhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccc
Confidence 66 999998774300000 3348999999853 221111
Q ss_pred -hhhHHHHHHHHhhcccCCcEEEe
Q 006731 398 -ESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 398 -e~~l~~vl~a~~r~LkpgG~lip 420 (633)
......++..+.++|+|||.++.
T Consensus 189 ~~~~~~~~l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 189 PGQPVAGLLRSLASALPAHAVIAV 212 (250)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred cccHHHHHHHHHHHhcCCCcEEEE
Confidence 24567899999999999999985
No 150
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.24 E-value=2.9e-12 Score=124.64 Aligned_cols=117 Identities=21% Similarity=0.138 Sum_probs=70.8
Q ss_pred hHHHHHHHHhCCCC-CCCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 006731 282 TDSYRQAILENPSL-MKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNA 359 (633)
Q Consensus 282 ~~~y~~aI~~~~~~-~~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~ 359 (633)
++.+.+.+...... .++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.|++++..++.
T Consensus 14 ~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------- 79 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-------------- 79 (215)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------------
T ss_pred HHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--------------
Confidence 33444444443333 6789999999999999999999853 3999999999999999998876553
Q ss_pred CcEEEEEccccccccccccCC-----CcccEEEEecccccccC------------------------hhhHHHHHHHHhh
Q 006731 360 GKMEVVQGMVEELGESMQIQP-----HSVDVLVSEWMGYCLLY------------------------ESMLSSVLFARDQ 410 (633)
Q Consensus 360 ~~I~vi~gd~e~l~~~~~l~~-----~~~DvIvse~mg~~L~~------------------------e~~l~~vl~a~~r 410 (633)
+++++++|+.+ . ++. ++||+|++++. |+... ...+..++..+.+
T Consensus 80 -~~~~~~~d~~~-~----~~~~~~~~~~fD~i~~npp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 152 (215)
T 4dzr_A 80 -VVDWAAADGIE-W----LIERAERGRPWHAIVSNPP-YIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPY 152 (215)
T ss_dssp ----CCHHHHHH-H----HHHHHHTTCCBSEEEECCC-CCC------------------------CTTHHHHHHHTCCGG
T ss_pred -ceEEEEcchHh-h----hhhhhhccCcccEEEECCC-CCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHH
Confidence 58899999987 3 333 79999999643 11100 0112678888899
Q ss_pred cccCCcE-EE
Q 006731 411 WLKPGGA-IL 419 (633)
Q Consensus 411 ~LkpgG~-li 419 (633)
+|||||. ++
T Consensus 153 ~LkpgG~l~~ 162 (215)
T 4dzr_A 153 VLARGRAGVF 162 (215)
T ss_dssp GBCSSSEEEE
T ss_pred HhcCCCeEEE
Confidence 9999999 55
No 151
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.24 E-value=1.5e-11 Score=132.80 Aligned_cols=115 Identities=26% Similarity=0.274 Sum_probs=92.1
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
++++|||+|||+|.+++.+++.|+++|+|||+|+.+++.|+++++.|++. ++++++++|+.++....
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~-------------~~v~~~~~d~~~~~~~~ 283 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVE-------------DRMKFIVGSAFEEMEKL 283 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCG-------------GGEEEEESCHHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-------------ccceEEECCHHHHHHHH
Confidence 78999999999999999999998889999999999999999999999985 58999999998764211
Q ss_pred ccCCCcccEEEEeccccccc------ChhhHHHHHHHHhhcccCCcEEEeecce
Q 006731 377 QIQPHSVDVLVSEWMGYCLL------YESMLSSVLFARDQWLKPGGAILPDTAT 424 (633)
Q Consensus 377 ~l~~~~~DvIvse~mg~~L~------~e~~l~~vl~a~~r~LkpgG~lip~~~t 424 (633)
....++||+|++.+.-+... .......++..+.++|+|||.++..+++
T Consensus 284 ~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 284 QKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp HHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred HhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 01246899999975322111 1134567888899999999999866544
No 152
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.24 E-value=1.6e-11 Score=128.57 Aligned_cols=114 Identities=16% Similarity=0.150 Sum_probs=91.0
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~a--Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
...++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.|+++++.+|+ .+++++++|+.+
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~--------------~~v~~~~~D~~~ 180 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV--------------LNVILFHSSSLH 180 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC--------------CSEEEESSCGGG
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC--------------CeEEEEECChhh
Confidence 3567899999999999999999986 235999999999999999999999888 569999999998
Q ss_pred cccccccCCCcccEEEEecc----cccccCh---------------hhHHHHHHHHhhcccCCcEEEeeccee
Q 006731 372 LGESMQIQPHSVDVLVSEWM----GYCLLYE---------------SMLSSVLFARDQWLKPGGAILPDTATM 425 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~m----g~~L~~e---------------~~l~~vl~a~~r~LkpgG~lip~~~t~ 425 (633)
+. ...++||+|++... |++.... .....++..+.++|||||.++.++|++
T Consensus 181 ~~----~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 181 IG----ELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp GG----GGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cc----cccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 76 33468999998642 2211111 012578899999999999999888775
No 153
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.24 E-value=4e-11 Score=118.76 Aligned_cols=108 Identities=24% Similarity=0.274 Sum_probs=83.5
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
....+.......++.+|||||||+|.++..+++.+ .+|+|+|+++.+++.|++++..+ +++++
T Consensus 58 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~----------------~~v~~ 120 (231)
T 1vbf_A 58 LGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYY----------------NNIKL 120 (231)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTC----------------SSEEE
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhc----------------CCeEE
Confidence 33444444556788999999999999999999998 59999999999999999987643 25999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+.+|+.+.. .+.++||+|++....+.+ ...+.++|+|||.++...
T Consensus 121 ~~~d~~~~~----~~~~~fD~v~~~~~~~~~---------~~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 121 ILGDGTLGY----EEEKPYDRVVVWATAPTL---------LCKPYEQLKEGGIMILPI 165 (231)
T ss_dssp EESCGGGCC----GGGCCEEEEEESSBBSSC---------CHHHHHTEEEEEEEEEEE
T ss_pred EECCccccc----ccCCCccEEEECCcHHHH---------HHHHHHHcCCCcEEEEEE
Confidence 999998732 234789999986432222 135778999999998654
No 154
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.24 E-value=1.9e-11 Score=126.18 Aligned_cols=119 Identities=20% Similarity=0.185 Sum_probs=89.4
Q ss_pred hHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 006731 282 TDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (633)
Q Consensus 282 ~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~ 361 (633)
++.+.+.+.......++.+|||+|||+|.+++.+++.+..+|+|+|+|+.+++.|+++++.+++. ++
T Consensus 108 te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~-------------~~ 174 (284)
T 1nv8_A 108 TEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVS-------------DR 174 (284)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCT-------------TS
T ss_pred HHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------Cc
Confidence 44444444432222356799999999999999999883349999999999999999999999986 67
Q ss_pred EEEEEccccccccccccCCCcc---cEEEEeccccccc---------ChhhH--------HHHHHHHh-hcccCCcEEEe
Q 006731 362 MEVVQGMVEELGESMQIQPHSV---DVLVSEWMGYCLL---------YESML--------SSVLFARD-QWLKPGGAILP 420 (633)
Q Consensus 362 I~vi~gd~e~l~~~~~l~~~~~---DvIvse~mg~~L~---------~e~~l--------~~vl~a~~-r~LkpgG~lip 420 (633)
++++++|+.+.. + ++| |+|||++. |... ++... ..++..+. +.|+|||.++.
T Consensus 175 v~~~~~D~~~~~-----~-~~f~~~D~IvsnPP-yi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 175 FFVRKGEFLEPF-----K-EKFASIEMILSNPP-YVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp EEEEESSTTGGG-----G-GGTTTCCEEEECCC-CBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred eEEEECcchhhc-----c-cccCCCCEEEEcCC-CCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 999999998743 2 578 99999742 2111 22211 15788888 99999999984
No 155
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.24 E-value=1.7e-11 Score=121.90 Aligned_cols=106 Identities=24% Similarity=0.319 Sum_probs=87.6
Q ss_pred CCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
.++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|+++++.+++. ++++++.+|+.+...
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~~~ 119 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLE-------------SRIELLFGDALQLGE 119 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCT-------------TTEEEECSCGGGSHH
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CcEEEEECCHHHHHH
Confidence 467899999999999999999983 359999999999999999999998886 789999999987521
Q ss_pred ccccC-CCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 375 SMQIQ-PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 375 ~~~l~-~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
. .. .++||+|++... . .....++..+.++|+|||.++.+.
T Consensus 120 ~--~~~~~~fD~I~~~~~---~---~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 120 K--LELYPLFDVLFIDAA---K---GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp H--HTTSCCEEEEEEEGG---G---SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred h--cccCCCccEEEECCC---H---HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 11 468999998543 1 246788899999999999999764
No 156
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.24 E-value=3.1e-11 Score=137.98 Aligned_cols=107 Identities=19% Similarity=0.191 Sum_probs=86.3
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCC--CeEEEEeCCHHHHHHHHHHHHhC------CCCCCCCCCCCCCCCCCcEEEEEc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGA--SRVIAVEASEKMAAVATQIAKDN------DFWWDRPQSEGNINNAGKMEVVQG 367 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa--~~V~aVD~S~~~~~~A~~~~~~n------gl~~~~~~~~~~~~~~~~I~vi~g 367 (633)
.++.+|||||||+|.++..+++.+. .+|+|||+|+.|++.|+++++.. ++ .+|+++++
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl--------------~nVefiqG 785 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV--------------KSATLYDG 785 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC--------------SEEEEEES
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC--------------CceEEEEC
Confidence 4789999999999999999999873 59999999999999999876532 33 68999999
Q ss_pred cccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 368 d~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
|+.+++ ++.++||+|++..+-+.+ .......++..+.++|||| .++.++
T Consensus 786 Da~dLp----~~d~sFDlVV~~eVLeHL-~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 786 SILEFD----SRLHDVDIGTCLEVIEHM-EEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp CTTSCC----TTSCSCCEEEEESCGGGS-CHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred chHhCC----cccCCeeEEEEeCchhhC-ChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 999988 677899999985432222 2334557899999999999 665443
No 157
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.24 E-value=2e-11 Score=140.85 Aligned_cols=113 Identities=15% Similarity=0.123 Sum_probs=92.9
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.+|++|||+|||||.+++.+++.|+.+|++||+|+.+++.|+++++.|++.. ++++++++|+.++..
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~------------~~v~~i~~D~~~~l~- 604 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTG------------RAHRLIQADCLAWLR- 604 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCS------------TTEEEEESCHHHHHH-
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCc------------cceEEEecCHHHHHH-
Confidence 4789999999999999999999999899999999999999999999999831 379999999988531
Q ss_pred cccCCCcccEEEEeccccc--------ccChhhHHHHHHHHhhcccCCcEEEeecc
Q 006731 376 MQIQPHSVDVLVSEWMGYC--------LLYESMLSSVLFARDQWLKPGGAILPDTA 423 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~--------L~~e~~l~~vl~a~~r~LkpgG~lip~~~ 423 (633)
...++||+|++.+..+. .........++..+.++|+|||.++.+.+
T Consensus 605 --~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 605 --EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp --HCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred --hcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 23478999999764221 12234567788999999999999996653
No 158
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.24 E-value=5.3e-11 Score=117.78 Aligned_cols=107 Identities=16% Similarity=0.231 Sum_probs=82.9
Q ss_pred CCCCCCCEEEEECCCcchHHHHHHHc-CC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccc
Q 006731 293 PSLMKGAVVMDIGCGTGILSLFAAQA-GA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (633)
Q Consensus 293 ~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e 370 (633)
..+.++.+|||+|||+|.++..+++. |. .+|+|+|.|+.+++.++++++.+ .+++++++|+.
T Consensus 69 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~----------------~~v~~~~~d~~ 132 (227)
T 1g8a_A 69 FPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER----------------RNIVPILGDAT 132 (227)
T ss_dssp CCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC----------------TTEEEEECCTT
T ss_pred cCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc----------------CCCEEEEccCC
Confidence 34667899999999999999999987 53 69999999999999998887643 46999999998
Q ss_pred ccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 371 ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 371 ~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+......+ .++||+|++... .......++..+.++|||||.++..
T Consensus 133 ~~~~~~~~-~~~~D~v~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 133 KPEEYRAL-VPKVDVIFEDVA-----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CGGGGTTT-CCCEEEEEECCC-----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Ccchhhcc-cCCceEEEECCC-----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 74311112 358999997643 2233445688999999999999843
No 159
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.23 E-value=3.6e-11 Score=120.22 Aligned_cols=107 Identities=17% Similarity=0.101 Sum_probs=88.2
Q ss_pred HHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
+.......++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|+++++.+++. .+++++.+|
T Consensus 83 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-------------~~~~~~~~d 148 (248)
T 2yvl_A 83 IALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLG-------------KNVKFFNVD 148 (248)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCC-------------TTEEEECSC
T ss_pred HHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-------------CcEEEEEcC
Confidence 334445678899999999999999999998 459999999999999999999988886 789999999
Q ss_pred ccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 369 ~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+.+.. ++.++||+|++..- ....++..+.++|+|||.++..
T Consensus 149 ~~~~~----~~~~~~D~v~~~~~--------~~~~~l~~~~~~L~~gG~l~~~ 189 (248)
T 2yvl_A 149 FKDAE----VPEGIFHAAFVDVR--------EPWHYLEKVHKSLMEGAPVGFL 189 (248)
T ss_dssp TTTSC----CCTTCBSEEEECSS--------CGGGGHHHHHHHBCTTCEEEEE
T ss_pred hhhcc----cCCCcccEEEECCc--------CHHHHHHHHHHHcCCCCEEEEE
Confidence 98754 35578999997431 2345678888999999999854
No 160
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.23 E-value=4.5e-12 Score=127.70 Aligned_cols=106 Identities=18% Similarity=0.169 Sum_probs=87.6
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.++++|||||||+|..++.+|++ + ..+|++||+++.+++.|+++++.+++. ++|+++.+|+.++.
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-------------~~i~~~~gda~~~l 125 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE-------------HKIKLRLGPALDTL 125 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT-------------TTEEEEESCHHHHH
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CcEEEEEcCHHHHH
Confidence 46789999999999999999996 2 359999999999999999999999986 79999999998754
Q ss_pred ccccc----CCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 374 ESMQI----QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~~l----~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.. + ..++||+|++... ......++..+.++|+|||+++.+.
T Consensus 126 ~~--~~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 126 HS--LLNEGGEHQFDFIFIDAD------KTNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp HH--HHHHHCSSCEEEEEEESC------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HH--HhhccCCCCEeEEEEcCC------hHHhHHHHHHHHHhcCCCeEEEEEC
Confidence 11 1 0378999997532 2446678899999999999999654
No 161
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.22 E-value=6.4e-11 Score=116.99 Aligned_cols=103 Identities=24% Similarity=0.332 Sum_probs=82.4
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc-CC-CeEEEEeCCHHHHHHHHHHHHhCCC----CCCCCCCCCCCCCCCcEEEEEcc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA-GA-SRVIAVEASEKMAAVATQIAKDNDF----WWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a-Ga-~~V~aVD~S~~~~~~A~~~~~~ngl----~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
..++.+|||||||+|.++..+++. |. .+|+|+|+++.+++.|++++..+++ . .+++++.+|
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~-------------~~v~~~~~d 141 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSS-------------GRVQLVVGD 141 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHT-------------SSEEEEESC
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCC-------------CcEEEEECC
Confidence 567899999999999999999987 54 4999999999999999999887653 2 579999999
Q ss_pred ccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeecc
Q 006731 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (633)
Q Consensus 369 ~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~~ 423 (633)
+.... .+.++||+|++..... .++..+.++|||||.++...+
T Consensus 142 ~~~~~----~~~~~fD~i~~~~~~~---------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 142 GRMGY----AEEAPYDAIHVGAAAP---------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp GGGCC----GGGCCEEEEEECSBBS---------SCCHHHHHTEEEEEEEEEEES
T ss_pred cccCc----ccCCCcCEEEECCchH---------HHHHHHHHhcCCCcEEEEEEe
Confidence 98654 3456899999754321 133567889999999986543
No 162
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.22 E-value=1.9e-10 Score=111.82 Aligned_cols=101 Identities=26% Similarity=0.266 Sum_probs=80.0
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
...++.+|||+|||+|.++..+++.|+.+|+|+|+|+.+++.|++++..+++ +++++++|+.+++
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---------------~~~~~~~d~~~~~ 110 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG---------------KFKVFIGDVSEFN 110 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT---------------SEEEEESCGGGCC
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC---------------CEEEEECchHHcC
Confidence 3467899999999999999999999887999999999999999999887653 5999999998764
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
.+||+|++++. |+.........++..+.++| ||.++
T Consensus 111 -------~~~D~v~~~~p-~~~~~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 111 -------SRVDIVIMNPP-FGSQRKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp -------CCCSEEEECCC-CSSSSTTTTHHHHHHHHHHC--SEEEE
T ss_pred -------CCCCEEEEcCC-CccccCCchHHHHHHHHHhc--CcEEE
Confidence 47999999864 22222234456777777777 55443
No 163
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.21 E-value=1.3e-11 Score=127.28 Aligned_cols=109 Identities=17% Similarity=0.152 Sum_probs=77.0
Q ss_pred CCCCEEEEECCCcchHHHHH-----HHcCCCeE--EEEeCCHHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCcE--EEE
Q 006731 296 MKGAVVMDIGCGTGILSLFA-----AQAGASRV--IAVEASEKMAAVATQIAKDN-DFWWDRPQSEGNINNAGKM--EVV 365 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~-----a~aGa~~V--~aVD~S~~~~~~A~~~~~~n-gl~~~~~~~~~~~~~~~~I--~vi 365 (633)
.++.+|||||||+|.++..+ ++....+| +|||.|+.|++.|++.+... ++ .++ .+.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~--------------~~v~~~~~ 116 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL--------------ENVKFAWH 116 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC--------------TTEEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC--------------CcceEEEE
Confidence 45689999999999765432 22222344 99999999999999988753 33 344 455
Q ss_pred Eccccccccc--cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 366 QGMVEELGES--MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 366 ~gd~e~l~~~--~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.++++++... ..+++++||+|++..+ +.+-.++..++..+.++|||||.++..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~fD~V~~~~~---l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 117 KETSSEYQSRMLEKKELQKWDFIHMIQM---LYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CSCHHHHHHHHHTTTCCCCEEEEEEESC---GGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred ecchhhhhhhhccccCCCceeEEEEeee---eeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 6666654300 0024578999998654 334456788999999999999999854
No 164
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.21 E-value=2e-11 Score=123.30 Aligned_cols=106 Identities=18% Similarity=0.173 Sum_probs=86.8
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.++++|||||||+|..++.++++ + ..+|+++|+++.+++.|+++++..++. ++|+++.+++.+..
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~-------------~~i~~~~gda~~~l 144 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD-------------HKIDFREGPALPVL 144 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG-------------GGEEEEESCHHHHH
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CCeEEEECCHHHHH
Confidence 46789999999999999999987 2 359999999999999999999999886 78999999998752
Q ss_pred ccccc-----CCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 374 ESMQI-----QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~~l-----~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.. + +.++||+|++... ......++..+.++|||||+++.+.
T Consensus 145 ~~--l~~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 145 DE--MIKDEKNHGSYDFIFVDAD------KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp HH--HHHSGGGTTCBSEEEECSC------STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred HH--HHhccCCCCCEEEEEEcCc------hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 11 1 1478999997531 1345778889999999999998654
No 165
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.21 E-value=1.3e-10 Score=116.41 Aligned_cols=106 Identities=16% Similarity=0.183 Sum_probs=78.4
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
.+.+|.+|||+|||||.++..+|+. | ..+|+|+|+|+.|++.+.+.++.. .+|.++.+|+..
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r----------------~nv~~i~~Da~~ 136 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR----------------PNIFPLLADARF 136 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC----------------TTEEEEECCTTC
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc----------------CCeEEEEccccc
Confidence 4778999999999999999999886 4 459999999999876555554432 569999999986
Q ss_pred cccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 372 LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
......+ .++||+|++... .......+...+.++|||||.++.+
T Consensus 137 ~~~~~~~-~~~~D~I~~d~a-----~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 137 PQSYKSV-VENVDVLYVDIA-----QPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp GGGTTTT-CCCEEEEEECCC-----CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhhcc-ccceEEEEecCC-----ChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 5311112 368999998742 1233344556667799999999965
No 166
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.21 E-value=3.4e-11 Score=122.93 Aligned_cols=110 Identities=25% Similarity=0.297 Sum_probs=89.9
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhC-C-CCCCCCCCCCCCCCCCcEE
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDN-D-FWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~n-g-l~~~~~~~~~~~~~~~~I~ 363 (633)
.+.......++.+|||+|||+|.++..+++. | ..+|+++|.++.+++.|+++++.+ + +. .+++
T Consensus 90 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~-------------~~v~ 156 (280)
T 1i9g_A 90 QIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPP-------------DNWR 156 (280)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCC-------------TTEE
T ss_pred HHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCC-------------CcEE
Confidence 3444455678899999999999999999986 3 469999999999999999999877 4 43 7899
Q ss_pred EEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++++|+.+.. ++.++||+|++... ....++..+.++|+|||.++...
T Consensus 157 ~~~~d~~~~~----~~~~~~D~v~~~~~--------~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 157 LVVSDLADSE----LPDGSVDRAVLDML--------APWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp EECSCGGGCC----CCTTCEEEEEEESS--------CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EEECchHhcC----CCCCceeEEEECCc--------CHHHHHHHHHHhCCCCCEEEEEe
Confidence 9999999876 66678999998432 23367888899999999998543
No 167
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.20 E-value=9.4e-12 Score=122.35 Aligned_cols=106 Identities=19% Similarity=0.180 Sum_probs=78.6
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHH----HhCCCCCCCCCCCCCCCCCCcEEEEEccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIA----KDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~----~~ngl~~~~~~~~~~~~~~~~I~vi~gd~ 369 (633)
..++.+|||||||+|.++..+++.+ ..+|+|||+|+.|++.+.+.+ ...++ .+++++++|+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~--------------~~v~~~~~d~ 90 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL--------------PNLLYLWATA 90 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC--------------TTEEEEECCS
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC--------------CceEEEecch
Confidence 4578899999999999999999984 359999999999887543333 33444 5799999999
Q ss_pred cccccccccCCCcccEEEEeccccccc---ChhhHHHHHHHHhhcccCCcEEEe
Q 006731 370 EELGESMQIQPHSVDVLVSEWMGYCLL---YESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 370 e~l~~~~~l~~~~~DvIvse~mg~~L~---~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
++++ ++.+. |.|+.. +.+... +-.....++..+.++|||||.++.
T Consensus 91 ~~l~----~~~~~-d~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (218)
T 3mq2_A 91 ERLP----PLSGV-GELHVL-MPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLV 138 (218)
T ss_dssp TTCC----SCCCE-EEEEEE-SCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEE
T ss_pred hhCC----CCCCC-CEEEEE-ccchhhhhhhhccHHHHHHHHHHHcCCCcEEEE
Confidence 9988 66555 777632 111111 111227789999999999999986
No 168
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.20 E-value=3.7e-11 Score=126.64 Aligned_cols=108 Identities=22% Similarity=0.315 Sum_probs=81.1
Q ss_pred CCCCCCCEEEEECCCcchHHHHHHHc-CC-CeEEEEeCCHHHHHHHHHHHHh-------CCCCCCCCCCCCCCCCCCcEE
Q 006731 293 PSLMKGAVVMDIGCGTGILSLFAAQA-GA-SRVIAVEASEKMAAVATQIAKD-------NDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 293 ~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga-~~V~aVD~S~~~~~~A~~~~~~-------ngl~~~~~~~~~~~~~~~~I~ 363 (633)
....++.+|||+|||+|.++..+++. |+ .+|+|+|+++.+++.|++++.. |++. ....+++
T Consensus 101 l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~----------~~~~~v~ 170 (336)
T 2b25_A 101 MDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVE----------EWPDNVD 170 (336)
T ss_dssp HTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSS----------CCCCCEE
T ss_pred cCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccccc----------ccCCceE
Confidence 35678999999999999999999997 65 6999999999999999999875 2221 0116799
Q ss_pred EEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
++.+|+.+.... ++.++||+|++..... ..++..+.++|+|||.++.
T Consensus 171 ~~~~d~~~~~~~--~~~~~fD~V~~~~~~~--------~~~l~~~~~~LkpgG~lv~ 217 (336)
T 2b25_A 171 FIHKDISGATED--IKSLTFDAVALDMLNP--------HVTLPVFYPHLKHGGVCAV 217 (336)
T ss_dssp EEESCTTCCC---------EEEEEECSSST--------TTTHHHHGGGEEEEEEEEE
T ss_pred EEECChHHcccc--cCCCCeeEEEECCCCH--------HHHHHHHHHhcCCCcEEEE
Confidence 999999886311 4556899999854211 2267888999999999983
No 169
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.20 E-value=3.8e-11 Score=122.90 Aligned_cols=109 Identities=21% Similarity=0.215 Sum_probs=89.7
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
.+.......++.+|||+|||+|.++..+++. | ..+|+++|+++.+++.|+++++.+++. .+++++
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-------------~~v~~~ 169 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI-------------ERVTIK 169 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG-------------GGEEEE
T ss_pred HHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-------------CCEEEE
Confidence 3444456778899999999999999999998 5 469999999999999999999988876 789999
Q ss_pred EccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 366 ~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.+|+.+. ++.++||+|++.+. ....++..+.++|+|||.++...
T Consensus 170 ~~d~~~~-----~~~~~~D~V~~~~~--------~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 170 VRDISEG-----FDEKDVDALFLDVP--------DPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp CCCGGGC-----CSCCSEEEEEECCS--------CGGGTHHHHHHHEEEEEEEEEEE
T ss_pred ECCHHHc-----ccCCccCEEEECCc--------CHHHHHHHHHHHcCCCCEEEEEe
Confidence 9999875 34568999998532 22467788889999999998543
No 170
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.19 E-value=5.9e-11 Score=118.40 Aligned_cols=106 Identities=19% Similarity=0.263 Sum_probs=81.4
Q ss_pred HHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
+.......++.+|||||||+|.++..+++.+..+|+++|+++.+++.|++++..+++ .+++++.+|
T Consensus 83 ~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------~~v~~~~~d 148 (235)
T 1jg1_A 83 MLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGV--------------KNVHVILGD 148 (235)
T ss_dssp HHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTC--------------CSEEEEESC
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CCcEEEECC
Confidence 333335678899999999999999999998536999999999999999999998888 459999999
Q ss_pred ccccccccccCC-CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 369 VEELGESMQIQP-HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 369 ~e~l~~~~~l~~-~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+. .. ++. .+||+|++......+ ...+.+.|+|||.++...
T Consensus 149 ~~-~~----~~~~~~fD~Ii~~~~~~~~---------~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 149 GS-KG----FPPKAPYDVIIVTAGAPKI---------PEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp GG-GC----CGGGCCEEEEEECSBBSSC---------CHHHHHTEEEEEEEEEEE
T ss_pred cc-cC----CCCCCCccEEEECCcHHHH---------HHHHHHhcCCCcEEEEEE
Confidence 73 22 333 359999985432211 135678999999998544
No 171
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.19 E-value=4.3e-11 Score=120.37 Aligned_cols=110 Identities=17% Similarity=0.234 Sum_probs=83.2
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhC--------CCCCCCCCCCCCCCCCCcEEEE
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDN--------DFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~n--------gl~~~~~~~~~~~~~~~~I~vi 365 (633)
+.++.+|||||||+|.+++.+++.++ .+|+|||+|+.+++.|+++++.+ ++ .+++++
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~--------------~nv~~~ 112 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF--------------QNINVL 112 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT--------------TTEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC--------------CcEEEE
Confidence 35678999999999999999999875 48999999999999999988776 55 579999
Q ss_pred Eccccc-cccccccCCCcccEEEEecccccccC-----hhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 QGMVEE-LGESMQIQPHSVDVLVSEWMGYCLLY-----ESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 ~gd~e~-l~~~~~l~~~~~DvIvse~mg~~L~~-----e~~l~~vl~a~~r~LkpgG~lip 420 (633)
++|+.+ ++.. ++.+.+|.|+........-. ......++..+.++|+|||.++.
T Consensus 113 ~~D~~~~l~~~--~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 113 RGNAMKFLPNF--FEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp ECCTTSCGGGT--SCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred eccHHHHHHHh--ccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 999987 3311 44578999985321110000 00014788899999999999985
No 172
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.19 E-value=1.7e-11 Score=132.95 Aligned_cols=114 Identities=20% Similarity=0.263 Sum_probs=87.4
Q ss_pred HHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcE
Q 006731 283 DSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (633)
Q Consensus 283 ~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I 362 (633)
..+.+.+.......++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++. ++. ...
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~~~-------------~~~ 154 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----GIR-------------VRT 154 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----TCC-------------EEC
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----CCC-------------cce
Confidence 44666677766677889999999999999999999988 999999999999888754 332 111
Q ss_pred -EEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 363 -EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 363 -~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.+..++.+.++ ++.++||+|++..+ +.+-..+..++..+.++|||||.++..
T Consensus 155 ~~~~~~~~~~l~----~~~~~fD~I~~~~v---l~h~~d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 155 DFFEKATADDVR----RTEGPANVIYAANT---LCHIPYVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp SCCSHHHHHHHH----HHHCCEEEEEEESC---GGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeechhhHhhcc----cCCCCEEEEEECCh---HHhcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 12234555555 55689999998654 333357889999999999999999965
No 173
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.19 E-value=2.5e-11 Score=128.48 Aligned_cols=115 Identities=19% Similarity=0.161 Sum_probs=89.9
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~ 363 (633)
..+.+.......++.+|||||||+|.++..+++.+. .+|+++|+|+.+++.|++++..+++. ++
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~---------------~~ 248 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE---------------GE 248 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC---------------CE
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC---------------CE
Confidence 334455444344577999999999999999999875 49999999999999999999988863 56
Q ss_pred EEEccccccccccccCCCcccEEEEecccccc--cChhhHHHHHHHHhhcccCCcEEEe
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCL--LYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L--~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
++.+|+.+.. .++||+|++++.-+.. ........++..+.++|||||.++.
T Consensus 249 ~~~~d~~~~~------~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 249 VFASNVFSEV------KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp EEECSTTTTC------CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEccccccc------cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 7888886543 4789999997642211 1234567899999999999999985
No 174
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.19 E-value=6.2e-12 Score=131.14 Aligned_cols=141 Identities=20% Similarity=0.225 Sum_probs=89.2
Q ss_pred hhhhhhhhcCCCCchhhH-------HhhcC------hhhhHHHHH-HHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCC
Q 006731 256 KKVNESYFGSYSSFGIHR-------EMISD------KVRTDSYRQ-AILENPSLMKGAVVMDIGCGTGILSLFAAQAGAS 321 (633)
Q Consensus 256 ~~~d~~yf~~Y~~~~~h~-------~mL~D------~~R~~~y~~-aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~ 321 (633)
...+..||.+|...+++. .||.+ .+...+|.- .|.....+.++.+|||||||+|.++..+++. .
T Consensus 27 ~~~~~~~f~~y~~~~i~e~~~~~a~~~l~~g~~~~~~~sR~a~KL~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~--~ 104 (305)
T 2p41_A 27 NALGKSEFQIYKKSGIQEVDRTLAKEGIKRGETDHHAVSRGSAKLRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL--K 104 (305)
T ss_dssp HHSCHHHHHHHHHTTCEEEECHHHHHHHHTTCCSSCCSSTHHHHHHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS--T
T ss_pred hHhhHHHHHHhcccCccccCHHHHHHHHHcCCCcCCccccHHHHHHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc--C
Confidence 344556888887665544 35533 233444432 2233333456899999999999999999998 4
Q ss_pred eEEEEeC----CHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc-cccccccccccCCCcccEEEEeccccccc
Q 006731 322 RVIAVEA----SEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG-MVEELGESMQIQPHSVDVLVSEWMGYCLL 396 (633)
Q Consensus 322 ~V~aVD~----S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g-d~e~l~~~~~l~~~~~DvIvse~mg~~L~ 396 (633)
+|+|||+ ++.+++.+ ..+.. ..++|+++++ |+..++ .++||+|+|.++.....
T Consensus 105 ~V~gvD~~~~~~~~~~~~~----~~~~~------------~~~~v~~~~~~D~~~l~------~~~fD~V~sd~~~~~g~ 162 (305)
T 2p41_A 105 NVREVKGLTKGGPGHEEPI----PMSTY------------GWNLVRLQSGVDVFFIP------PERCDTLLCDIGESSPN 162 (305)
T ss_dssp TEEEEEEECCCSTTSCCCC----CCCST------------TGGGEEEECSCCTTTSC------CCCCSEEEECCCCCCSS
T ss_pred CEEEEeccccCchhHHHHH----Hhhhc------------CCCCeEEEeccccccCC------cCCCCEEEECCccccCc
Confidence 8999999 55332110 01111 0157999999 887654 46899999986533111
Q ss_pred Chhh---HHHHHHHHhhcccCCcEEEe
Q 006731 397 YESM---LSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 397 ~e~~---l~~vl~a~~r~LkpgG~lip 420 (633)
+... ...++..+.++|||||.++.
T Consensus 163 ~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 163 PTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred chhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 1111 11477888899999998884
No 175
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.18 E-value=2.8e-11 Score=119.72 Aligned_cols=106 Identities=20% Similarity=0.189 Sum_probs=86.5
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.++++|||||||+|.+++.++++ + ..+|+++|+++.+++.|+++++.+++. ++++++++|+.+..
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-------------~~i~~~~~d~~~~~ 134 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE-------------HKIDLRLKPALETL 134 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT-------------TTEEEEESCHHHHH
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC-------------CeEEEEEcCHHHHH
Confidence 46789999999999999999987 2 469999999999999999999999886 78999999987652
Q ss_pred cccccCC----CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 374 ESMQIQP----HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~~l~~----~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.. ++. ++||+|++... ......++..+.++|+|||.++...
T Consensus 135 ~~--~~~~~~~~~~D~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 135 DE--LLAAGEAGTFDVAVVDAD------KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp HH--HHHTTCTTCEEEEEECSC------STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HH--HHhcCCCCCccEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 11 211 68999998542 2345678888999999999999654
No 176
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.18 E-value=4.8e-11 Score=119.38 Aligned_cols=108 Identities=23% Similarity=0.262 Sum_probs=86.6
Q ss_pred CCCCEEEEECCCcchHHHHHHHcC--CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAG--ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aG--a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.++++|||||||+|.++..+++.. ..+|+++|.++.+++.|+++++.+++. ++++++.+|+.+..
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-------------~~v~~~~~d~~~~~ 125 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE-------------NKIFLKLGSALETL 125 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG-------------GGEEEEESCHHHHH
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CCEEEEECCHHHHH
Confidence 467899999999999999999883 459999999999999999999998886 67999999987642
Q ss_pred ccc-----------ccCC--CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 374 ESM-----------QIQP--HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~-----------~l~~--~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
... .++. ++||+|++.. ....+..++..+.++|+|||+++...
T Consensus 126 ~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~------~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 126 QVLIDSKSAPSWASDFAFGPSSIDLFFLDA------DKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHHHHCSSCCGGGTTTCCSTTCEEEEEECS------CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHhhcccccccccccCCCCCcCEEEEeC------CHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 110 0122 6899999753 12345678899999999999999643
No 177
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.18 E-value=4.7e-11 Score=119.72 Aligned_cols=106 Identities=12% Similarity=0.119 Sum_probs=87.4
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.++++|||||||+|..++.++++ + ..+|+++|+++.+++.|+++++..|+. ++|+++.+|+.+..
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-------------~~i~~~~gda~~~l 135 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE-------------HKINFIESDAMLAL 135 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG-------------GGEEEEESCHHHHH
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CcEEEEEcCHHHHH
Confidence 46789999999999999999987 2 359999999999999999999999986 78999999998753
Q ss_pred ccccc-----CCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 374 ESMQI-----QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~~l-----~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.. + +.++||+|++.. .......++..+.++|+|||+++.+.
T Consensus 136 ~~--l~~~~~~~~~fD~I~~d~------~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 136 DN--LLQGQESEGSYDFGFVDA------DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp HH--HHHSTTCTTCEEEEEECS------CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HH--HHhccCCCCCcCEEEECC------chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 11 2 147899999753 12346778899999999999999654
No 178
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.18 E-value=2.3e-11 Score=125.26 Aligned_cols=116 Identities=17% Similarity=0.077 Sum_probs=83.6
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhC--CCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDN--DFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~n--gl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.++++|||||||+|.++..+++.+..+|++||+++.+++.|++++ .. ++. ....+....+++++.+|+.+..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~-----~~~~~~~~~~v~~~~~D~~~~l 147 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLL-----EAMLNGKHEKAKLTIGDGFEFI 147 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHH-----HHHHTTCCSSEEEEESCHHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccc-----cccccCCCCcEEEEECchHHHh
Confidence 356899999999999999999887779999999999999999987 33 220 0000001168999999987753
Q ss_pred cccccCCCcccEEEEecccccccChhh-HHHHHHHHhhcccCCcEEEee
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESM-LSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~-l~~vl~a~~r~LkpgG~lip~ 421 (633)
. . .++||+|++............ ...++..+.++|+|||+++..
T Consensus 148 ~---~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 148 K---N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp H---H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred c---c-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 1 2 478999999764322111111 267888999999999999865
No 179
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.17 E-value=7.3e-11 Score=127.22 Aligned_cols=108 Identities=17% Similarity=0.131 Sum_probs=85.5
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
+|++|||+|||||.+++.+|+.|+. |+|||+|+.+++.|+++++.|++. . .++++|+.++...
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~~-------------~--~~~~~D~~~~l~~- 276 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGLR-------------V--DIRHGEALPTLRG- 276 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCC-------------C--EEEESCHHHHHHT-
T ss_pred CCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCCC-------------C--cEEEccHHHHHHH-
Confidence 5899999999999999999999985 999999999999999999999985 4 4569999876421
Q ss_pred ccCCCcccEEEEecccccccC-------hhhHHHHHHHHhhcccCCcEEEeecce
Q 006731 377 QIQPHSVDVLVSEWMGYCLLY-------ESMLSSVLFARDQWLKPGGAILPDTAT 424 (633)
Q Consensus 377 ~l~~~~~DvIvse~mg~~L~~-------e~~l~~vl~a~~r~LkpgG~lip~~~t 424 (633)
++ +.||+|++++.. +... ......++..+.++|+|||.++..+++
T Consensus 277 -~~-~~fD~Ii~dpP~-f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 277 -LE-GPFHHVLLDPPT-LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp -CC-CCEEEEEECCCC-CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -hc-CCCCEEEECCCc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 23 449999997532 2211 123457888889999999999965544
No 180
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.17 E-value=5.6e-11 Score=119.19 Aligned_cols=111 Identities=14% Similarity=0.164 Sum_probs=81.3
Q ss_pred CCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHh------CCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKD------NDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~------ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
.++.+|||||||+|.++..+|+.. ...|+|||+|+.|++.|+++++. +++ .+|.++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~--------------~nv~~~~~d 110 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF--------------QNIACLRSN 110 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC--------------TTEEEEECC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC--------------CeEEEEECc
Confidence 456799999999999999999874 35899999999999999988753 344 679999999
Q ss_pred ccc-cccccccCCCcccEEEEeccccccc--Chh---hHHHHHHHHhhcccCCcEEEeec
Q 006731 369 VEE-LGESMQIQPHSVDVLVSEWMGYCLL--YES---MLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 369 ~e~-l~~~~~l~~~~~DvIvse~mg~~L~--~e~---~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+.+ ++.. ++.++||.|++.......- +.. ....++..+.++|||||.++..+
T Consensus 111 ~~~~l~~~--~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 111 AMKHLPNF--FYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp TTTCHHHH--CCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhhhhh--CCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 987 4311 4568899998642111000 000 01468999999999999998654
No 181
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.17 E-value=4.1e-11 Score=119.65 Aligned_cols=108 Identities=17% Similarity=0.162 Sum_probs=86.3
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.++++|||||||+|..++.++++ + ..+|+++|.++.+++.|+++++.+++. ++|+++.+++.+..
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-------------~~i~~~~~d~~~~l 137 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA-------------EKISLRLGPALATL 137 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG-------------GGEEEEESCHHHHH
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CcEEEEEcCHHHHH
Confidence 35789999999999999999987 2 349999999999999999999988886 78999999986642
Q ss_pred cccccCC--CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 374 ESMQIQP--HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~~l~~--~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
....... ++||+|++... ......++..+.++|+|||.++.+.
T Consensus 138 ~~l~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 138 EQLTQGKPLPEFDLIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp HHHHTSSSCCCEEEEEECSC------GGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred HHHHhcCCCCCcCEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 1111112 68999997532 2346778899999999999999654
No 182
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.17 E-value=7.4e-11 Score=118.88 Aligned_cols=108 Identities=15% Similarity=0.092 Sum_probs=77.8
Q ss_pred CCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc-cc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL-GE 374 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l-~~ 374 (633)
++.+|||+|||+|.++..+++. ...+|+|+|+|+.|++.|+++++.+++. ++++++++|+.+. ..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~~~~ 131 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLS-------------DLIKVVKVPQKTLLMD 131 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT-------------TTEEEEECCTTCSSTT
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCC-------------ccEEEEEcchhhhhhh
Confidence 5789999999999999888876 2359999999999999999999999986 7799999998762 21
Q ss_pred ccccC---CCcccEEEEecccccccC-h--h----------hHHHHHHHHhhcccCCcEEEe
Q 006731 375 SMQIQ---PHSVDVLVSEWMGYCLLY-E--S----------MLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 375 ~~~l~---~~~~DvIvse~mg~~L~~-e--~----------~l~~vl~a~~r~LkpgG~lip 420 (633)
. ++ .++||+|++++. |+... + . ....++..+.++|||||.+..
T Consensus 132 ~--~~~~~~~~fD~i~~npp-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 132 A--LKEESEIIYDFCMCNPP-FFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp T--STTCCSCCBSEEEECCC-CC-------------------------CTTTTHHHHTHHHH
T ss_pred h--hhcccCCcccEEEECCC-CccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 1 33 258999999853 22211 0 0 012355677889999987754
No 183
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.17 E-value=4.6e-11 Score=128.40 Aligned_cols=113 Identities=19% Similarity=0.198 Sum_probs=89.6
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
++++|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|+++++.|++. +++++++|+.++....
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~--------------~~~~~~~d~~~~~~~~ 273 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLG--------------NVRVLEANAFDLLRRL 273 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCT--------------TEEEEESCHHHHHHHH
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC--------------CceEEECCHHHHHHHH
Confidence 7889999999999999999998 669999999999999999999999984 4999999998864211
Q ss_pred ccCCCcccEEEEecccccccC------hhhHHHHHHHHhhcccCCcEEEeecce
Q 006731 377 QIQPHSVDVLVSEWMGYCLLY------ESMLSSVLFARDQWLKPGGAILPDTAT 424 (633)
Q Consensus 377 ~l~~~~~DvIvse~mg~~L~~------e~~l~~vl~a~~r~LkpgG~lip~~~t 424 (633)
.....+||+|++.+.-+.... ......++..+.++|+|||.++.++++
T Consensus 274 ~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 274 EKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 011468999999764222111 134567888899999999999976543
No 184
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.16 E-value=1.3e-11 Score=123.11 Aligned_cols=107 Identities=15% Similarity=0.094 Sum_probs=75.9
Q ss_pred CCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCC-HHHHHHH---HHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEAS-EKMAAVA---TQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S-~~~~~~A---~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e 370 (633)
.++.+|||||||+|.++..+++.. ..+|+|||+| +.|++.| ++++...++ .++.+++++++
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~--------------~~v~~~~~d~~ 88 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL--------------SNVVFVIAAAE 88 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC--------------SSEEEECCBTT
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC--------------CCeEEEEcCHH
Confidence 467899999999999999999652 3489999999 7776665 777777776 57999999999
Q ss_pred ccccccccCCCcccEEEEecccccccChh---hHHHHHHHHhhcccCCcEEEe
Q 006731 371 ELGESMQIQPHSVDVLVSEWMGYCLLYES---MLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 371 ~l~~~~~l~~~~~DvIvse~mg~~L~~e~---~l~~vl~a~~r~LkpgG~lip 420 (633)
+++.. + ...+|.|++...-..+ .+. ....++.++.++|||||.++.
T Consensus 89 ~l~~~--~-~d~v~~i~~~~~~~~~-~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 89 SLPFE--L-KNIADSISILFPWGTL-LEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp BCCGG--G-TTCEEEEEEESCCHHH-HHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred Hhhhh--c-cCeEEEEEEeCCCcHH-hhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 87511 1 1344544432110000 000 124688999999999999986
No 185
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.16 E-value=1.7e-10 Score=118.42 Aligned_cols=109 Identities=16% Similarity=0.098 Sum_probs=83.9
Q ss_pred CCCEEEEECCCc---chHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 297 KGAVVMDIGCGT---GILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 297 ~~~~VLDVGcGt---G~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
...+|||||||+ |.++..+++.. ..+|++||.|+.|++.|++++.. . .+++++++|+.+.
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~-------------~~v~~~~~D~~~~ 140 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---D-------------PNTAVFTADVRDP 140 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---C-------------TTEEEEECCTTCH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---C-------------CCeEEEEeeCCCc
Confidence 347999999999 98887776652 24999999999999999998743 1 6799999999864
Q ss_pred ccc-------cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 373 GES-------MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 373 ~~~-------~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
... ..++..+||+|++..+-+++..+ ....++..+.+.|+|||.++...
T Consensus 141 ~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 141 EYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp HHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhhhccchhhccCCCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEE
Confidence 210 01333589999987655555433 57889999999999999999654
No 186
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.16 E-value=3.9e-11 Score=125.97 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=84.4
Q ss_pred CCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD--NDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~--ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
++++|||||||+|.++..+++. +..+|++||+++.+++.|++++.. +++. ..+++++.+|+.+..
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~------------~~~v~~~~~D~~~~l 183 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYE------------DKRVNVFIEDASKFL 183 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG------------STTEEEEESCHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC------------CCcEEEEEccHHHHH
Confidence 5689999999999999999988 557999999999999999998765 2331 168999999998742
Q ss_pred cccccCCCcccEEEEecccccccChhhH-HHHHHHHhhcccCCcEEEee
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESML-SSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l-~~vl~a~~r~LkpgG~lip~ 421 (633)
. ...++||+|++............. ..++..+.+.|+|||+++..
T Consensus 184 ~---~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 184 E---NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp H---HCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred h---hcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 1 234789999987542211111122 67889999999999999854
No 187
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.16 E-value=3.8e-11 Score=123.91 Aligned_cols=109 Identities=17% Similarity=0.137 Sum_probs=77.2
Q ss_pred HHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE-
Q 006731 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV- 364 (633)
Q Consensus 286 ~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v- 364 (633)
..++.......++++|||||||||.++..+++.|+.+|+|||+|+.|++.+.+. + .++..
T Consensus 74 ~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~---~----------------~rv~~~ 134 (291)
T 3hp7_A 74 EKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ---D----------------DRVRSM 134 (291)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT---C----------------TTEEEE
T ss_pred HHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---C----------------ccccee
Confidence 344544433457899999999999999999999999999999999998764331 1 23332
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
...++..+.. ..++...||+|++....+ .+..++.++.++|+|||.++.
T Consensus 135 ~~~ni~~l~~-~~l~~~~fD~v~~d~sf~------sl~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 135 EQYNFRYAEP-VDFTEGLPSFASIDVSFI------SLNLILPALAKILVDGGQVVA 183 (291)
T ss_dssp CSCCGGGCCG-GGCTTCCCSEEEECCSSS------CGGGTHHHHHHHSCTTCEEEE
T ss_pred cccCceecch-hhCCCCCCCEEEEEeeHh------hHHHHHHHHHHHcCcCCEEEE
Confidence 2345555441 114444599999864311 236788999999999999984
No 188
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.16 E-value=1.1e-10 Score=114.71 Aligned_cols=105 Identities=25% Similarity=0.300 Sum_probs=81.0
Q ss_pred HHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
+..... .++.+|||||||+|.++..+++.| .+|+|+|+|+.+++.|+++. ..++.+|
T Consensus 25 l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~---------------------~~~~~~d 81 (230)
T 3cc8_A 25 LLKHIK-KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL---------------------DHVVLGD 81 (230)
T ss_dssp HHTTCC-TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS---------------------SEEEESC
T ss_pred HHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC---------------------CcEEEcc
Confidence 444433 578999999999999999999987 59999999999997776421 3678899
Q ss_pred ccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 369 ~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+.+... .++.++||+|++..+ +.+...+..++..+.++|+|||.++..
T Consensus 82 ~~~~~~--~~~~~~fD~v~~~~~---l~~~~~~~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 82 IETMDM--PYEEEQFDCVIFGDV---LEHLFDPWAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp TTTCCC--CSCTTCEEEEEEESC---GGGSSCHHHHHHHTGGGEEEEEEEEEE
T ss_pred hhhcCC--CCCCCccCEEEECCh---hhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 887321 155679999998543 223345678999999999999999964
No 189
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.16 E-value=5.4e-11 Score=122.16 Aligned_cols=111 Identities=12% Similarity=0.044 Sum_probs=84.9
Q ss_pred CCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD--NDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~--ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
++++|||||||+|.++..+++. +..+|++||+++.+++.|++++.. +++. .++++++.+|..+..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~------------~~rv~v~~~D~~~~l 142 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLD------------DPRVDVQVDDGFMHI 142 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTT------------STTEEEEESCSHHHH
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccC------------CCceEEEECcHHHHH
Confidence 5689999999999999999988 678999999999999999998753 2331 168999999988742
Q ss_pred cccccCCCcccEEEEecccccccChh-hHHHHHHHHhhcccCCcEEEeec
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYES-MLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~-~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
. ...++||+|++........... ....++..+.+.|+|||+++...
T Consensus 143 ~---~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 143 A---KSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp H---TCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred h---hCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 1 2347899999975432211100 12568888999999999998553
No 190
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.16 E-value=1.1e-10 Score=121.68 Aligned_cols=110 Identities=16% Similarity=0.031 Sum_probs=82.7
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHh---CCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD---NDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~---ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
.++++|||||||+|.++..+++. +..+|++||+++.+++.|++++.. .... .+++++.+|+.+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~-------------~~v~~~~~D~~~ 160 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLAD-------------PRATVRVGDGLA 160 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGC-------------TTEEEEESCHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCC-------------CcEEEEECcHHH
Confidence 46789999999999999999987 456999999999999999998732 1112 689999999988
Q ss_pred cccccccCCCcccEEEEecccccccChhhH--HHHHHHHhhcccCCcEEEee
Q 006731 372 LGESMQIQPHSVDVLVSEWMGYCLLYESML--SSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~mg~~L~~e~~l--~~vl~a~~r~LkpgG~lip~ 421 (633)
+... .+.++||+|++......... ..+ ..++..+.++|||||+++..
T Consensus 161 ~~~~--~~~~~fDvIi~d~~~~~~~~-~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 161 FVRQ--TPDNTYDVVIIDTTDPAGPA-SKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp HHHS--SCTTCEEEEEEECC----------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHh--ccCCceeEEEECCCCccccc-hhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 7511 13578999999754332111 111 57889999999999999854
No 191
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.15 E-value=6.1e-12 Score=129.32 Aligned_cols=112 Identities=19% Similarity=0.194 Sum_probs=76.2
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE-
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV- 365 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi- 365 (633)
..+.....+.++.+|||||||+|.++..+++. .+|+|||+++ |+..|++ +... ....+.+++++
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~----~~~~--------~~~~~~~v~~~~ 136 (276)
T 2wa2_A 72 AWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHE----KPRL--------VETFGWNLITFK 136 (276)
T ss_dssp HHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSC----CCCC--------CCCTTGGGEEEE
T ss_pred HHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhh----chhh--------hhhcCCCeEEEe
Confidence 33444444567899999999999999999998 4899999999 5322221 1110 00011278999
Q ss_pred -EccccccccccccCCCcccEEEEecccccccCh-hh-H--HHHHHHHhhcccCCc--EEEe
Q 006731 366 -QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYE-SM-L--SSVLFARDQWLKPGG--AILP 420 (633)
Q Consensus 366 -~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e-~~-l--~~vl~a~~r~LkpgG--~lip 420 (633)
++|+++++ +++||+|+|... +..... .. . ..++..+.++||||| .++.
T Consensus 137 ~~~D~~~l~------~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 137 SKVDVTKME------PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp CSCCGGGCC------CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred ccCcHhhCC------CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 89998764 578999999865 322121 11 1 137888899999999 8874
No 192
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.15 E-value=6.9e-11 Score=124.83 Aligned_cols=98 Identities=17% Similarity=0.190 Sum_probs=83.8
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||+|||+|.+++. ++ ++.+|+|+|+|+.+++.|+++++.|++. ++++++++|+.++.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~-------------~~v~~~~~D~~~~~-- 256 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLE-------------HKIIPILSDVREVD-- 256 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCT-------------TTEEEEESCGGGCC--
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CcEEEEECChHHhc--
Confidence 4789999999999999999 87 6779999999999999999999999986 78999999998753
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++||+|++.+..+. ..++..+.++|+|||.++...
T Consensus 257 -----~~fD~Vi~dpP~~~-------~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 257 -----VKGNRVIMNLPKFA-------HKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp -----CCEEEEEECCTTTG-------GGGHHHHHHHEEEEEEEEEEE
T ss_pred -----CCCcEEEECCcHhH-------HHHHHHHHHHcCCCCEEEEEE
Confidence 68999998753221 257777889999999988544
No 193
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.15 E-value=6.5e-11 Score=122.89 Aligned_cols=111 Identities=18% Similarity=0.092 Sum_probs=82.9
Q ss_pred CCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD--NDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~--ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
++++|||||||+|.++..+++. +..+|++||+++.+++.|++++.. +++. ..+++++.+|+.+..
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~------------~~~v~~~~~D~~~~l 157 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFD------------DPRAEIVIANGAEYV 157 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGG------------CTTEEEEESCHHHHG
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccC------------CCceEEEECcHHHHH
Confidence 5689999999999999999988 567999999999999999998754 3331 168999999988743
Q ss_pred cccccCCCcccEEEEecccc-cccChh-hHHHHHHHHhhcccCCcEEEeec
Q 006731 374 ESMQIQPHSVDVLVSEWMGY-CLLYES-MLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~-~L~~e~-~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
. ...++||+|++..... ...... ....++..+.++|+|||+++...
T Consensus 158 ~---~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 158 R---KFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp G---GCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred h---hCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 1 2347899999875322 100000 12578889999999999999653
No 194
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.14 E-value=2.2e-10 Score=120.05 Aligned_cols=106 Identities=15% Similarity=0.176 Sum_probs=87.2
Q ss_pred CCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
.++.+|||||||+|.++..+++.. ..+|+++|++ .+++.|++++...++. ++|+++.+|+.+.+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~~- 228 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVA-------------SRYHTIAGSAFEVD- 228 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCG-------------GGEEEEESCTTTSC-
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCC-------------cceEEEecccccCC-
Confidence 567899999999999999999872 3499999999 9999999999888886 78999999998766
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++ ..||+|++..+-+.+ .......++..+.+.|+|||.++..
T Consensus 229 ---~~-~~~D~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 229 ---YG-NDYDLVLLPNFLHHF-DVATCEQLLRKIKTALAVEGKVIVF 270 (335)
T ss_dssp ---CC-SCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CC-CCCcEEEEcchhccC-CHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 55 459999986543322 2345678999999999999988754
No 195
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.14 E-value=1.9e-10 Score=123.23 Aligned_cols=101 Identities=13% Similarity=0.174 Sum_probs=84.2
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc-c
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE-L 372 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~-l 372 (633)
..++++||||| |+|.+++.+++.|+ .+|+|+|+++.|++.|+++++.+|+ .+|+++++|+.+ +
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~--------------~~v~~~~~D~~~~l 234 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY--------------EDIEIFTFDLRKPL 234 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC--------------CCEEEECCCTTSCC
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CCEEEEEChhhhhc
Confidence 34689999999 99999999999876 7999999999999999999998887 579999999988 5
Q ss_pred cccccc-CCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEE
Q 006731 373 GESMQI-QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAI 418 (633)
Q Consensus 373 ~~~~~l-~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~l 418 (633)
+ . ..++||+|++++. +.. .....++..+.+.|+|||.+
T Consensus 235 ~----~~~~~~fD~Vi~~~p-~~~---~~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 235 P----DYALHKFDTFITDPP-ETL---EAIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp C----TTTSSCBSEEEECCC-SSH---HHHHHHHHHHHHTBCSTTCE
T ss_pred h----hhccCCccEEEECCC-Cch---HHHHHHHHHHHHHcccCCeE
Confidence 4 2 2368999999753 211 12578899999999999943
No 196
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.14 E-value=5.3e-11 Score=134.48 Aligned_cols=106 Identities=18% Similarity=0.208 Sum_probs=79.2
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||||||+|+++..+|+.|+ .|+|||+|+.+++.|+..+..+|. -+|++.+++++++...
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~--------------~~~~~~~~~~~~~~~~ 129 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPD--------------FAAEFRVGRIEEVIAA 129 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTT--------------SEEEEEECCHHHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCC--------------CceEEEECCHHHHhhh
Confidence 4568999999999999999999999 899999999999999999988875 4699999999998421
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
.+.++||+|+|.-|-+.+.....+.. +.+..+.|+++|..+
T Consensus 130 --~~~~~fD~v~~~e~~ehv~~~~~~~~-~~~~~~tl~~~~~~~ 170 (569)
T 4azs_A 130 --LEEGEFDLAIGLSVFHHIVHLHGIDE-VKRLLSRLADVTQAV 170 (569)
T ss_dssp --CCTTSCSEEEEESCHHHHHHHHCHHH-HHHHHHHHHHHSSEE
T ss_pred --ccCCCccEEEECcchhcCCCHHHHHH-HHHHHHHhcccccee
Confidence 44578999999544333322211111 233455566666544
No 197
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.14 E-value=7.2e-11 Score=124.58 Aligned_cols=112 Identities=16% Similarity=0.151 Sum_probs=85.4
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhC--CCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDN--DFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~n--gl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.++++|||||||+|.++..+++. +..+|++||+|+.+++.|++++... ++. ..+++++.+|+.+.
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~------------~~rv~~~~~D~~~~ 186 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE------------DPRVNLVIGDGVAF 186 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG------------STTEEEEESCHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC------------CCcEEEEECCHHHH
Confidence 45689999999999999999987 3569999999999999999987642 331 16899999999875
Q ss_pred ccccccCCCcccEEEEecccccccChhh-HHHHHHHHhhcccCCcEEEee
Q 006731 373 GESMQIQPHSVDVLVSEWMGYCLLYESM-LSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~~L~~e~~-l~~vl~a~~r~LkpgG~lip~ 421 (633)
... ++.++||+|++.........+.. ...++..+.++|+|||+++..
T Consensus 187 l~~--~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 187 LKN--AAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp HHT--SCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred HHh--ccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 311 23478999998754222111111 367899999999999999964
No 198
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.13 E-value=1.4e-10 Score=115.03 Aligned_cols=100 Identities=19% Similarity=0.278 Sum_probs=79.6
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc-CC------CeEEEEeCCHHHHHHHHHHHHhCC-----CCCCCCCCCCCCCCCCcE
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA-GA------SRVIAVEASEKMAAVATQIAKDND-----FWWDRPQSEGNINNAGKM 362 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a-Ga------~~V~aVD~S~~~~~~A~~~~~~ng-----l~~~~~~~~~~~~~~~~I 362 (633)
..++.+|||||||+|.++..+++. |. .+|+++|+++.+++.|++++..++ . .++
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~--------------~~v 147 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS--------------GQL 147 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH--------------TSE
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCC--------------Cce
Confidence 567899999999999999999885 43 499999999999999999988765 3 679
Q ss_pred EEEEccccccccccccCC-CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 363 EVVQGMVEELGESMQIQP-HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 363 ~vi~gd~e~l~~~~~l~~-~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+++.+|+.+. ++. ++||+|++...... +...+.++|||||.++...
T Consensus 148 ~~~~~d~~~~-----~~~~~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 148 LIVEGDGRKG-----YPPNAPYNAIHVGAAAPD---------TPTELINQLASGGRLIVPV 194 (227)
T ss_dssp EEEESCGGGC-----CGGGCSEEEEEECSCBSS---------CCHHHHHTEEEEEEEEEEE
T ss_pred EEEECCcccC-----CCcCCCccEEEECCchHH---------HHHHHHHHhcCCCEEEEEE
Confidence 9999999872 333 68999998543221 2256788999999988543
No 199
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.13 E-value=9.5e-11 Score=122.28 Aligned_cols=107 Identities=17% Similarity=0.234 Sum_probs=82.4
Q ss_pred CEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccc
Q 006731 299 AVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQ 377 (633)
Q Consensus 299 ~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~ 377 (633)
.+|||||||+|.++..+++. ...+|++||+++.+++.|++.+..+. . .+++++.+|..++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~-------------~rv~v~~~Da~~~l~~-- 154 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-A-------------PRVKIRVDDARMVAES-- 154 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-T-------------TTEEEEESCHHHHHHT--
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-C-------------CceEEEECcHHHHHhh--
Confidence 49999999999999999994 33499999999999999999875432 2 7899999999876411
Q ss_pred cCCCcccEEEEecccccccChhh-HHHHHHHHhhcccCCcEEEee
Q 006731 378 IQPHSVDVLVSEWMGYCLLYESM-LSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 378 l~~~~~DvIvse~mg~~L~~e~~-l~~vl~a~~r~LkpgG~lip~ 421 (633)
++.++||+||+............ ...++..+.+.|+|||+++..
T Consensus 155 ~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~ 199 (317)
T 3gjy_A 155 FTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVAN 199 (317)
T ss_dssp CCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 34578999999754322111111 267899999999999999854
No 200
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.12 E-value=1.6e-10 Score=123.70 Aligned_cols=107 Identities=21% Similarity=0.236 Sum_probs=85.3
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
..++.+|||+|||+|.+++.+++.+. .+|+|+|+|+.|++.|+++++.+|+. ++|+++++|+.+++
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~-------------~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVL-------------DKIKFIQGDATQLS 281 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCG-------------GGCEEEECCGGGGG
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCC-------------CceEEEECChhhCC
Confidence 56789999999999999999999875 48999999999999999999999987 78999999999988
Q ss_pred cccccCCCcccEEEEecc-ccccc----ChhhHHHHHHHHhhcccCCcEEE
Q 006731 374 ESMQIQPHSVDVLVSEWM-GYCLL----YESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~m-g~~L~----~e~~l~~vl~a~~r~LkpgG~li 419 (633)
.+.++||+||+++. +..+. .+.....++..+.++| +|+.++
T Consensus 282 ----~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~ 327 (373)
T 3tm4_A 282 ----QYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVF 327 (373)
T ss_dssp ----GTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEE
T ss_pred ----cccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEE
Confidence 66689999999853 22111 1122367788888888 443333
No 201
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.12 E-value=7.5e-12 Score=127.91 Aligned_cols=110 Identities=16% Similarity=0.146 Sum_probs=74.5
Q ss_pred HHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE--E
Q 006731 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV--Q 366 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi--~ 366 (633)
+.....+.++.+|||||||+|.++..+++. .+|+|||+++ |+..+++ .... ......+++++ +
T Consensus 66 i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~----~~~~--------~~~~~~~v~~~~~~ 130 (265)
T 2oxt_A 66 MEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHE----VPRI--------TESYGWNIVKFKSR 130 (265)
T ss_dssp HHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCC----CCCC--------CCBTTGGGEEEECS
T ss_pred HHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhh----hhhh--------hhccCCCeEEEecc
Confidence 333344567899999999999999999998 5899999998 5322211 1110 00011278999 8
Q ss_pred ccccccccccccCCCcccEEEEecccccccCh-hhHH---HHHHHHhhcccCCc--EEEe
Q 006731 367 GMVEELGESMQIQPHSVDVLVSEWMGYCLLYE-SMLS---SVLFARDQWLKPGG--AILP 420 (633)
Q Consensus 367 gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e-~~l~---~vl~a~~r~LkpgG--~lip 420 (633)
+|+.+++ +++||+|+|... +..... .... .++..+.++||||| .++.
T Consensus 131 ~D~~~l~------~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 131 VDIHTLP------VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp CCTTTSC------CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred cCHhHCC------CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 9998764 578999999865 322221 1111 27888899999999 8874
No 202
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.12 E-value=8e-11 Score=129.11 Aligned_cols=114 Identities=18% Similarity=0.161 Sum_probs=90.8
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a--Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
..++.+|||+|||+|..+..+|+. +..+|+|+|+|+.+++.++++++.+|+ . |.++++|+.++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~--------------~-v~~~~~Da~~l 163 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA--------------P-LAVTQAPPRAL 163 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC--------------C-CEEECSCHHHH
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--------------e-EEEEECCHHHh
Confidence 568899999999999999999976 335999999999999999999999987 6 99999999887
Q ss_pred ccccccCCCcccEEEEecc----cccccCh---------------hhHHHHHHHHhhcccCCcEEEeecceeE
Q 006731 373 GESMQIQPHSVDVLVSEWM----GYCLLYE---------------SMLSSVLFARDQWLKPGGAILPDTATMF 426 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~m----g~~L~~e---------------~~l~~vl~a~~r~LkpgG~lip~~~t~~ 426 (633)
.. ...++||+|+++.. |.+-... .....++..+.++|||||+++.++|++.
T Consensus 164 ~~---~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 164 AE---AFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp HH---HHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred hh---hccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 52 12478999997632 1111001 0126788999999999999999988863
No 203
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.12 E-value=8.9e-11 Score=122.33 Aligned_cols=112 Identities=18% Similarity=0.126 Sum_probs=83.3
Q ss_pred CCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKD--NDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~--ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.++++|||||||+|.++..+++.+ ..+|++||+++.+++.|++++.. +++. ..+++++.+|+.+.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~------------~~rv~v~~~Da~~~ 161 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS------------SSKLTLHVGDGFEF 161 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG------------CTTEEEEESCHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccC------------CCcEEEEECcHHHH
Confidence 456899999999999999999884 57999999999999999998765 3441 17899999999874
Q ss_pred ccccccCCCcccEEEEecccccccChh-hHHHHHHHHhhcccCCcEEEeec
Q 006731 373 GESMQIQPHSVDVLVSEWMGYCLLYES-MLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~~L~~e~-~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.. ...++||+|++.........+. ....++..+.++|+|||+++...
T Consensus 162 l~---~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 162 MK---QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp HH---TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred Hh---hCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 21 2357899999875432111110 12467889999999999999543
No 204
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.11 E-value=3.7e-10 Score=120.34 Aligned_cols=106 Identities=13% Similarity=0.063 Sum_probs=87.2
Q ss_pred CCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc--
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL-- 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l-- 372 (633)
....+|||||||+|.++..+++.. ..+|+++|. +.+++.|++++...++. ++|+++.+|+.+.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~~~ 243 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGS-------------ERIHGHGANLLDRDV 243 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTG-------------GGEEEEECCCCSSSC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcc-------------cceEEEEccccccCC
Confidence 356899999999999999999863 348999999 99999999999888876 7999999999875
Q ss_pred ccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 373 GESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+ +| ++||+|++..+-+.+ .......++..+.+.|||||.++..
T Consensus 244 ~----~p-~~~D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 244 P----FP-TGFDAVWMSQFLDCF-SEEEVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp C----CC-CCCSEEEEESCSTTS-CHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred C----CC-CCcCEEEEechhhhC-CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3 44 789999986543322 3345568899999999999999853
No 205
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.11 E-value=2.1e-10 Score=113.29 Aligned_cols=107 Identities=16% Similarity=0.197 Sum_probs=81.7
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCC------CeEEEEeCCHHHHHHHHHHHHhCCC----CCCCCCCCCCCCCCCcEE
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGA------SRVIAVEASEKMAAVATQIAKDNDF----WWDRPQSEGNINNAGKME 363 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa------~~V~aVD~S~~~~~~A~~~~~~ngl----~~~~~~~~~~~~~~~~I~ 363 (633)
.+.++.+|||||||+|.++..+++.+. .+|+|+|.++.+++.|+++++.+++ . .+++
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~-------------~~v~ 143 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKI-------------DNFK 143 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSS-------------TTEE
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCcccccc-------------CCEE
Confidence 356789999999999999999998743 4999999999999999999988773 2 6899
Q ss_pred EEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
++.+|+.+.........++||+|++..... .++..+.++|||||+++...
T Consensus 144 ~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~---------~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 144 IIHKNIYQVNEEEKKELGLFDAIHVGASAS---------ELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp EEECCGGGCCHHHHHHHCCEEEEEECSBBS---------SCCHHHHHHEEEEEEEEEEE
T ss_pred EEECChHhcccccCccCCCcCEEEECCchH---------HHHHHHHHhcCCCcEEEEEE
Confidence 999999874200001236899999864322 13466788999999988543
No 206
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.11 E-value=5.8e-10 Score=118.81 Aligned_cols=114 Identities=20% Similarity=0.162 Sum_probs=90.4
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEE
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~ 366 (633)
.+.......++.+|||||||+|.++..+++.. ..+++++|+ +.+++.|++++..+++. ++|+++.
T Consensus 173 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~-------------~~v~~~~ 238 (374)
T 1qzz_A 173 APADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLA-------------DRVTVAE 238 (374)
T ss_dssp HHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT-------------TTEEEEE
T ss_pred HHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCC-------------CceEEEe
Confidence 34444455678999999999999999999884 349999999 99999999999988886 7899999
Q ss_pred ccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 367 GMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 367 gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+|+.+ . ++ ..||+|++..+-+.+ .......++..+.+.|+|||.++...
T Consensus 239 ~d~~~-~----~~-~~~D~v~~~~vl~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 239 GDFFK-P----LP-VTADVVLLSFVLLNW-SDEDALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp CCTTS-C----CS-CCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCC-c----CC-CCCCEEEEeccccCC-CHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99976 3 44 349999986543322 22334589999999999999988544
No 207
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.11 E-value=2.5e-10 Score=117.72 Aligned_cols=87 Identities=21% Similarity=0.313 Sum_probs=73.2
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
..+.|.......++.+|||||||+|.++..+++.+. +|+|||+++.+++.|++++..+++. +++++
T Consensus 16 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~-------------~~v~~ 81 (285)
T 1zq9_A 16 IINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVA-------------SKLQV 81 (285)
T ss_dssp HHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTG-------------GGEEE
T ss_pred HHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCC-------------CceEE
Confidence 344455555667889999999999999999999876 9999999999999999998877664 68999
Q ss_pred EEccccccccccccCCCcccEEEEecc
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWM 391 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~m 391 (633)
+++|+.+++ ++ .||+|+++..
T Consensus 82 ~~~D~~~~~----~~--~fD~vv~nlp 102 (285)
T 1zq9_A 82 LVGDVLKTD----LP--FFDTCVANLP 102 (285)
T ss_dssp EESCTTTSC----CC--CCSEEEEECC
T ss_pred EEcceeccc----ch--hhcEEEEecC
Confidence 999999876 54 7999999753
No 208
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.11 E-value=1.3e-10 Score=117.89 Aligned_cols=93 Identities=20% Similarity=0.304 Sum_probs=76.6
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
.++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|+++. .++.++.+++++++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------------------~~~~~~~~d~~~~~- 143 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-------------------PQVTFCVASSHRLP- 143 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-------------------TTSEEEECCTTSCS-
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-------------------CCcEEEEcchhhCC-
Confidence 46789999999999999999997 2349999999999998888753 45789999999887
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++.++||+|++... ..++..+.++|||||.++..
T Consensus 144 ---~~~~~fD~v~~~~~----------~~~l~~~~~~L~pgG~l~~~ 177 (269)
T 1p91_A 144 ---FSDTSMDAIIRIYA----------PCKAEELARVVKPGGWVITA 177 (269)
T ss_dssp ---BCTTCEEEEEEESC----------CCCHHHHHHHEEEEEEEEEE
T ss_pred ---CCCCceeEEEEeCC----------hhhHHHHHHhcCCCcEEEEE
Confidence 67789999998432 12467888999999999853
No 209
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.11 E-value=6.5e-11 Score=123.91 Aligned_cols=111 Identities=20% Similarity=0.155 Sum_probs=81.6
Q ss_pred CCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhC--CCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDN--DFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~n--gl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
++++|||||||+|.++..+++. +..+|++||+++.+++.|++++... ++. ..+++++.+|+.+..
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~------------~~rv~~~~~D~~~~l 175 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFS------------HPKLDLFCGDGFEFL 175 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGG------------CTTEEEECSCHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccC------------CCCEEEEEChHHHHH
Confidence 5689999999999999999987 4569999999999999999987643 331 178999999998742
Q ss_pred cccccCCCcccEEEEecccccccChhhH-HHHHHHHhhcccCCcEEEeec
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESML-SSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l-~~vl~a~~r~LkpgG~lip~~ 422 (633)
. ...++||+|++............. ..++..+.++|+|||+++...
T Consensus 176 ~---~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 176 K---NHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp H---HCTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred H---hcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 1 235789999987643221111112 678899999999999999654
No 210
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.11 E-value=1.3e-10 Score=110.19 Aligned_cols=93 Identities=17% Similarity=0.156 Sum_probs=71.4
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||+|||+|.++..+++.+ +|+|||+|+.|++. . .+++++++|+.+ .
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~----------~-------------~~~~~~~~d~~~-~-- 73 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES----------H-------------RGGNLVRADLLC-S-- 73 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT----------C-------------SSSCEEECSTTT-T--
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc----------c-------------cCCeEEECChhh-h--
Confidence 467899999999999999999988 99999999999855 2 668899999987 3
Q ss_pred cccCCCcccEEEEecccccccC-------hhhHHHHHHHHhhcccCCcEEEe
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLY-------ESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~-------e~~l~~vl~a~~r~LkpgG~lip 420 (633)
++.++||+|++++. |.... ......++..+.+.| |||.++.
T Consensus 74 --~~~~~fD~i~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~ 121 (170)
T 3q87_B 74 --INQESVDVVVFNPP-YVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYL 121 (170)
T ss_dssp --BCGGGCSEEEECCC-CBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEE
T ss_pred --cccCCCCEEEECCC-CccCCccccccCCcchHHHHHHHHhhC-CCCEEEE
Confidence 45589999999753 22111 112234666666677 9999984
No 211
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.10 E-value=2.1e-10 Score=118.18 Aligned_cols=113 Identities=15% Similarity=0.095 Sum_probs=85.1
Q ss_pred CCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
.++++|||||||+|.++..+++.. ..+|++||+++.+++.|++++...+- +....+++++.+|+.+...
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~----------~~~~~~v~~~~~D~~~~l~ 146 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISC----------GYEDKRVNVFIEDASKFLE 146 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSG----------GGGSTTEEEEESCHHHHHH
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhcc----------ccCCCcEEEEECChHHHHH
Confidence 456899999999999999999873 56999999999999999998764320 0011689999999987531
Q ss_pred ccccCCCcccEEEEecccccccChhhH-HHHHHHHhhcccCCcEEEee
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESML-SSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l-~~vl~a~~r~LkpgG~lip~ 421 (633)
...++||+|++............. ..++..+.+.|+|||+++..
T Consensus 147 ---~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 147 ---NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp ---HCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred ---hCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 124789999987543221111111 68899999999999999954
No 212
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.10 E-value=1.6e-10 Score=120.96 Aligned_cols=112 Identities=15% Similarity=0.132 Sum_probs=85.4
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHh--CC-CCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD--ND-FWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~--ng-l~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
.++++|||||||+|.++..+++. +..+|++||+++.+++.|++++.. .+ +. ..+++++.+|+.+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~------------~~~v~~~~~D~~~ 143 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD------------DPRAVLVIDDARA 143 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG------------CTTEEEEESCHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccccc------------CCceEEEEchHHH
Confidence 35689999999999999999987 456999999999999999998764 22 21 1689999999987
Q ss_pred cccccccCCCcccEEEEeccccc---ccChhh-HHHHHHHHhhcccCCcEEEeec
Q 006731 372 LGESMQIQPHSVDVLVSEWMGYC---LLYESM-LSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~mg~~---L~~e~~-l~~vl~a~~r~LkpgG~lip~~ 422 (633)
... ...++||+|++...... ...... ...++..+.+.|+|||+++...
T Consensus 144 ~l~---~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 144 YLE---RTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp HHH---HCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHH---hcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 421 23578999999754332 101111 3678999999999999999653
No 213
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.10 E-value=4e-10 Score=115.61 Aligned_cols=119 Identities=18% Similarity=0.146 Sum_probs=81.0
Q ss_pred CCCEEEEECCCcch----HHHHHHHc-CC----CeEEEEeCCHHHHHHHHHHHHh----CCCCCCC--------CCC-C-
Q 006731 297 KGAVVMDIGCGTGI----LSLFAAQA-GA----SRVIAVEASEKMAAVATQIAKD----NDFWWDR--------PQS-E- 353 (633)
Q Consensus 297 ~~~~VLDVGcGtG~----lsl~~a~a-Ga----~~V~aVD~S~~~~~~A~~~~~~----ngl~~~~--------~~~-~- 353 (633)
++.+|||+|||||. +++.+++. |. .+|+|+|+|+.|++.|++.+.. .+++... ... .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999997 77777765 41 2899999999999999986411 0100000 000 0
Q ss_pred ---CCCCCCCcEEEEEccccccccccccC-CCcccEEEEec-ccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 354 ---GNINNAGKMEVVQGMVEELGESMQIQ-PHSVDVLVSEW-MGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 354 ---~~~~~~~~I~vi~gd~e~l~~~~~l~-~~~~DvIvse~-mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.......+|+|.++|+.+.+ ++ .++||+|+|.. +.|+ .......++..+.+.|+|||.++..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~----~~~~~~fDlI~crnvliyf--~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQ----YNVPGPFDAIFCRNVMIYF--DKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSS----CCCCCCEEEEEECSSGGGS--CHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCC----CCcCCCeeEEEECCchHhC--CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 00001146999999998854 43 47899999953 4443 3445688999999999999999853
No 214
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.09 E-value=1.3e-10 Score=120.51 Aligned_cols=114 Identities=16% Similarity=0.172 Sum_probs=82.0
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
.++++|||||||+|.++..+++. +..+|++||+++.+++.|++++...+.. .....+++++.+|..+...
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~---------~~~~~rv~~~~~D~~~~l~ 152 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAG---------SYDDPRFKLVIDDGVNFVN 152 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSS---------CTTCTTCCEECSCSCC---
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccc---------cccCCceEEEEChHHHHHh
Confidence 35689999999999999999998 5679999999999999999987653210 0011589999999887541
Q ss_pred ccccCCCcccEEEEecccccccChhhH--HHHHHHHhhcccCCcEEEeec
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESML--SSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l--~~vl~a~~r~LkpgG~lip~~ 422 (633)
.+.++||+||+......... ..+ ..++..+.+.|+|||+++...
T Consensus 153 ---~~~~~fDvIi~D~~~p~~~~-~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 153 ---QTSQTFDVIISDCTDPIGPG-ESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ---CCCCCEEEEEECC-----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---hcCCCccEEEECCCCccCcc-hhccHHHHHHHHHHhcCCCCEEEEec
Confidence 23578999999754322111 112 678899999999999999543
No 215
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.09 E-value=8.4e-10 Score=117.18 Aligned_cols=113 Identities=14% Similarity=0.110 Sum_probs=90.4
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEE
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~ 366 (633)
.+.......++.+|||||||+|.++..+++.. ..+|+++|+ +.+++.|+++++.+++. ++|+++.
T Consensus 181 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-------------~~v~~~~ 246 (359)
T 1x19_A 181 LLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVA-------------DRMRGIA 246 (359)
T ss_dssp HHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCT-------------TTEEEEE
T ss_pred HHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCC-------------CCEEEEe
Confidence 34444445678999999999999999999884 349999999 99999999999988886 7899999
Q ss_pred ccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 367 GMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 367 gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+|+.+.+ ++. .|+|++..+-+.+ .......++..+.+.|+|||.++..
T Consensus 247 ~d~~~~~----~~~--~D~v~~~~vlh~~-~d~~~~~~l~~~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 247 VDIYKES----YPE--ADAVLFCRILYSA-NEQLSTIMCKKAFDAMRSGGRLLIL 294 (359)
T ss_dssp CCTTTSC----CCC--CSEEEEESCGGGS-CHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CccccCC----CCC--CCEEEEechhccC-CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9998876 543 4999986543322 2334788999999999999999743
No 216
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.09 E-value=1.2e-09 Score=116.70 Aligned_cols=114 Identities=18% Similarity=0.148 Sum_probs=90.7
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
..+.......++.+|||||||+|.++..+++.. ..+++++|+ +.+++.|++++...++. ++|+++
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~-------------~~v~~~ 257 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLA-------------DRCEIL 257 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT-------------TTEEEE
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcC-------------CceEEe
Confidence 344444455677999999999999999999883 348999999 99999999999988886 899999
Q ss_pred EccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 366 ~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.+|+. .+ +|. .||+|++..+-+.+ .......++..+.+.|+|||.++..
T Consensus 258 ~~d~~-~~----~p~-~~D~v~~~~vlh~~-~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 258 PGDFF-ET----IPD-GADVYLIKHVLHDW-DDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp ECCTT-TC----CCS-SCSEEEEESCGGGS-CHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ccCCC-CC----CCC-CceEEEhhhhhccC-CHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 99998 33 454 89999986543322 2333457999999999999999854
No 217
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.09 E-value=2.6e-10 Score=112.27 Aligned_cols=91 Identities=26% Similarity=0.331 Sum_probs=75.4
Q ss_pred CCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccc
Q 006731 298 GAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQ 377 (633)
Q Consensus 298 ~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~ 377 (633)
+.+|||||||+|.++..+++. +|+|+|+.+++.|+++ +++++.+++.+++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~---------------------~~~~~~~d~~~~~---- 97 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR---------------------GVFVLKGTAENLP---- 97 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT---------------------TCEEEECBTTBCC----
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc---------------------CCEEEEcccccCC----
Confidence 889999999999999887654 9999999999888764 3678999998887
Q ss_pred cCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 378 IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 378 l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++.++||+|++..+ +.+-..+..++..+.++|+|||.++..
T Consensus 98 ~~~~~fD~v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~i~ 138 (219)
T 1vlm_A 98 LKDESFDFALMVTT---ICFVDDPERALKEAYRILKKGGYLIVG 138 (219)
T ss_dssp SCTTCEEEEEEESC---GGGSSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCeeEEEEcch---HhhccCHHHHHHHHHHHcCCCcEEEEE
Confidence 66789999998643 222245678999999999999999864
No 218
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.09 E-value=6.4e-10 Score=116.77 Aligned_cols=108 Identities=18% Similarity=0.096 Sum_probs=87.4
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
...++.+|||||||+|.++..+++.. ..+++++|+ +.+++.|++++...++. ++|+++.+|+.+
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~- 230 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLS-------------GRAQVVVGSFFD- 230 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT-------------TTEEEEECCTTS-
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcC-------------cCeEEecCCCCC-
Confidence 33456899999999999999998873 348999999 99999999999988886 899999999973
Q ss_pred ccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 373 GESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+ +|. +||+|++..+-+.+ .......++..+.+.|+|||.++...
T Consensus 231 ~----~p~-~~D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 231 P----LPA-GAGGYVLSAVLHDW-DDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp C----CCC-SCSEEEEESCGGGS-CHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred C----CCC-CCcEEEEehhhccC-CHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 3 454 89999986543322 23346789999999999999998644
No 219
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.08 E-value=1.9e-10 Score=125.95 Aligned_cols=116 Identities=19% Similarity=0.115 Sum_probs=92.0
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~a--Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
...++.+|||+|||+|..+..+|+. +..+|+|+|+++.+++.++++++.+|+ .+|.++++|..+
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~--------------~nv~v~~~Da~~ 167 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV--------------SNAIVTNHAPAE 167 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC--------------SSEEEECCCHHH
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CceEEEeCCHHH
Confidence 3567899999999999999999876 446999999999999999999999998 579999999988
Q ss_pred cccccccCCCcccEEEEecc----cccccChh---------------hHHHHHHHHhhcccCCcEEEeecceeE
Q 006731 372 LGESMQIQPHSVDVLVSEWM----GYCLLYES---------------MLSSVLFARDQWLKPGGAILPDTATMF 426 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~m----g~~L~~e~---------------~l~~vl~a~~r~LkpgG~lip~~~t~~ 426 (633)
+.. ...++||+|+++.. |.+--... ....++..+.++|||||.++.++|++.
T Consensus 168 l~~---~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 168 LVP---HFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp HHH---HHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred hhh---hccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 752 12478999998742 21111111 123678899999999999999998864
No 220
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.08 E-value=5e-10 Score=118.35 Aligned_cols=116 Identities=15% Similarity=0.151 Sum_probs=91.9
Q ss_pred HHHhCCCCCC-CCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 288 AILENPSLMK-GAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 288 aI~~~~~~~~-~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
.+.......+ +.+|||||||+|.++..+++.. ..+++++|. +.+++.|++++...++. ++|+++
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-------------~~v~~~ 234 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLG-------------GRVEFF 234 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCG-------------GGEEEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCC-------------CceEEE
Confidence 3444445556 7999999999999999999873 359999999 77999999999988886 789999
Q ss_pred EccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 366 ~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.+|+.+.+. ++++.||+|++..+-+.+ .......++..+.+.|+|||.++..
T Consensus 235 ~~d~~~~~~---~~~~~~D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 235 EKNLLDARN---FEGGAADVVMLNDCLHYF-DAREAREVIGHAAGLVKPGGALLIL 286 (352)
T ss_dssp ECCTTCGGG---GTTCCEEEEEEESCGGGS-CHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eCCcccCcc---cCCCCccEEEEecccccC-CHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999987641 134679999986543332 3335678999999999999999853
No 221
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.08 E-value=5.8e-11 Score=119.12 Aligned_cols=98 Identities=10% Similarity=0.161 Sum_probs=76.7
Q ss_pred CCCEEEEECCCcchHHHHHHHc----C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQA----G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~a----G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
++.+|||||||+|.++..+++. + ..+|+|||+|+.+++.|+ ++. .+|+++++|+.+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~-------------~~v~~~~gD~~~ 141 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDM-------------ENITLHQGDCSD 141 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGC-------------TTEEEEECCSSC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccC-------------CceEEEECcchh
Confidence 5689999999999999999986 2 359999999999987776 222 679999999988
Q ss_pred c---ccccccCCCcccEEEEecccccccChhhHHHHHHHHhh-cccCCcEEEeec
Q 006731 372 L---GESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQ-WLKPGGAILPDT 422 (633)
Q Consensus 372 l---~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r-~LkpgG~lip~~ 422 (633)
. +. +...+||+|++... + ..+..++.++.+ +|||||+++...
T Consensus 142 ~~~l~~---~~~~~fD~I~~d~~-~-----~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 142 LTTFEH---LREMAHPLIFIDNA-H-----ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SGGGGG---GSSSCSSEEEEESS-C-----SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred HHHHHh---hccCCCCEEEECCc-h-----HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 5 31 22247999997542 1 245678888887 999999999654
No 222
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.07 E-value=2.8e-10 Score=125.64 Aligned_cols=113 Identities=16% Similarity=0.160 Sum_probs=89.9
Q ss_pred CCCEEEEECCCcchHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~a--Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
++.+|||+|||+|..+..+|+. +..+|+|+|+|+.+++.++++++.+|+ .+|+++++|+.++..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~--------------~nv~~~~~D~~~~~~ 182 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI--------------SNVALTHFDGRVFGA 182 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC--------------CSEEEECCCSTTHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CcEEEEeCCHHHhhh
Confidence 7899999999999999999986 236999999999999999999999888 579999999988751
Q ss_pred ccccCCCcccEEEEecc----cccccCh---------------hhHHHHHHHHhhcccCCcEEEeecceeE
Q 006731 375 SMQIQPHSVDVLVSEWM----GYCLLYE---------------SMLSSVLFARDQWLKPGGAILPDTATMF 426 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~m----g~~L~~e---------------~~l~~vl~a~~r~LkpgG~lip~~~t~~ 426 (633)
...++||+|+++.. |.+-... .....++..+.++|||||+++.++|++.
T Consensus 183 ---~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 183 ---AVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp ---HSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred ---hccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 13478999998632 2111111 1124678888999999999999888763
No 223
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.06 E-value=5.1e-11 Score=119.37 Aligned_cols=109 Identities=18% Similarity=0.147 Sum_probs=70.4
Q ss_pred HHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 286 ~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
.+++.......++++|||||||||.++..+++.|+.+|+|||+|+.|++.|+++.. ++.+.
T Consensus 26 ~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~-------------------~~~~~ 86 (232)
T 3opn_A 26 EKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE-------------------RVVVM 86 (232)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT-------------------TEEEE
T ss_pred HHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc-------------------ccccc
Confidence 34454444445688999999999999999999998899999999999987765322 22211
Q ss_pred -EccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 -QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 -~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
..++..+.. ..++...+|.+.+..+-.. +..++.++.++|||||.++.
T Consensus 87 ~~~~~~~~~~-~~~~~~~~d~~~~D~v~~~------l~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 87 EQFNFRNAVL-ADFEQGRPSFTSIDVSFIS------LDLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp CSCCGGGCCG-GGCCSCCCSEEEECCSSSC------GGGTHHHHHHHSCTTCEEEE
T ss_pred ccceEEEeCH-hHcCcCCCCEEEEEEEhhh------HHHHHHHHHHhccCCCEEEE
Confidence 112222110 0022122455544322111 26688999999999999985
No 224
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.04 E-value=6.8e-10 Score=116.49 Aligned_cols=112 Identities=17% Similarity=0.108 Sum_probs=88.0
Q ss_pred HHhCCCCCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc
Q 006731 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g 367 (633)
+.......+ .+|||||||+|.++..+++.. ..+|+++|+ +.+++.|++++...++. ++|+++.+
T Consensus 160 ~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-------------~~v~~~~~ 224 (334)
T 2ip2_A 160 IPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAG-------------ERVSLVGG 224 (334)
T ss_dssp HHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHT-------------TSEEEEES
T ss_pred HHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCC-------------CcEEEecC
Confidence 333333344 899999999999999999873 348999999 99999999998877765 78999999
Q ss_pred cccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 368 d~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
|+.+ + ++ ++||+|++..+-+.+ .......++..+.+.|+|||.++...
T Consensus 225 d~~~-~----~~-~~~D~v~~~~vl~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 225 DMLQ-E----VP-SNGDIYLLSRIIGDL-DEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp CTTT-C----CC-SSCSEEEEESCGGGC-CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCC-C----CC-CCCCEEEEchhccCC-CHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9987 4 55 679999986543322 23345689999999999999998543
No 225
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.04 E-value=1.1e-09 Score=116.07 Aligned_cols=112 Identities=20% Similarity=0.238 Sum_probs=88.3
Q ss_pred HHhCCCCCCCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc
Q 006731 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g 367 (633)
+.......++.+|||||||+|.++..+++.+. .+++++|+ +.+++.|++++..+++. ++|+++.+
T Consensus 175 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~-------------~~v~~~~~ 240 (360)
T 1tw3_A 175 PAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLS-------------DRVDVVEG 240 (360)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCT-------------TTEEEEEC
T ss_pred HHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCC-------------CceEEEeC
Confidence 33333456788999999999999999998853 48999999 89999999999988886 78999999
Q ss_pred cccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 368 d~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
|+.+ . ++ ..||+|++..+-+.+ .......++..+.+.|+|||.++..
T Consensus 241 d~~~-~----~~-~~~D~v~~~~vl~~~-~~~~~~~~l~~~~~~L~pgG~l~i~ 287 (360)
T 1tw3_A 241 DFFE-P----LP-RKADAIILSFVLLNW-PDHDAVRILTRCAEALEPGGRILIH 287 (360)
T ss_dssp CTTS-C----CS-SCEEEEEEESCGGGS-CHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCC-C----CC-CCccEEEEcccccCC-CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9976 3 44 359999986543322 2233467899999999999998854
No 226
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.04 E-value=8.7e-10 Score=106.78 Aligned_cols=91 Identities=18% Similarity=0.125 Sum_probs=70.2
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
..++.+|||+|||+|.++..+++.|+.+|+|||+|+.+++.|++++. +++++++|+.+++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-------------------~~~~~~~d~~~~~- 108 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-------------------GVNFMVADVSEIS- 108 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-------------------TSEEEECCGGGCC-
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-------------------CCEEEECcHHHCC-
Confidence 45788999999999999999999988789999999999999988653 4789999998753
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcc
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWL 412 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~L 412 (633)
++||+|+++..-+.+. ......++..+.+.|
T Consensus 109 ------~~~D~v~~~~p~~~~~-~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 109 ------GKYDTWIMNPPFGSVV-KHSDRAFIDKAFETS 139 (200)
T ss_dssp ------CCEEEEEECCCC--------CHHHHHHHHHHE
T ss_pred ------CCeeEEEECCCchhcc-CchhHHHHHHHHHhc
Confidence 5899999986422222 222345777777777
No 227
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.03 E-value=6.6e-10 Score=115.44 Aligned_cols=83 Identities=20% Similarity=0.360 Sum_probs=66.3
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g 367 (633)
.|.......++.+|||||||+|.++..+++.+. +|+|||+++.+++.|++++..+++ .+++++++
T Consensus 33 ~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~--------------~~v~~~~~ 97 (299)
T 2h1r_A 33 KIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGY--------------NNLEVYEG 97 (299)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTC--------------CCEEC---
T ss_pred HHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCC--------------CceEEEEC
Confidence 333333456789999999999999999999865 999999999999999999987776 67999999
Q ss_pred cccccccccccCCCcccEEEEecc
Q 006731 368 MVEELGESMQIQPHSVDVLVSEWM 391 (633)
Q Consensus 368 d~e~l~~~~~l~~~~~DvIvse~m 391 (633)
|+.+++ + .+||+|+++..
T Consensus 98 D~~~~~----~--~~~D~Vv~n~p 115 (299)
T 2h1r_A 98 DAIKTV----F--PKFDVCTANIP 115 (299)
T ss_dssp -CCSSC----C--CCCSEEEEECC
T ss_pred chhhCC----c--ccCCEEEEcCC
Confidence 998876 4 48999999753
No 228
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.03 E-value=1e-09 Score=120.51 Aligned_cols=116 Identities=15% Similarity=0.160 Sum_probs=90.7
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~a--Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
...++.+|||+|||+|..+..+++. +..+|+|+|+++.+++.++++++.+|+ .+++++++|+.+
T Consensus 256 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~--------------~~v~~~~~D~~~ 321 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI--------------KIVKPLVKDARK 321 (450)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC--------------CSEEEECSCTTC
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC--------------CcEEEEEcChhh
Confidence 3567899999999999999999986 325999999999999999999999888 579999999987
Q ss_pred cccccccCCCcccEEEEecc--cccccC--hh--------h-------HHHHHHHHhhcccCCcEEEeeccee
Q 006731 372 LGESMQIQPHSVDVLVSEWM--GYCLLY--ES--------M-------LSSVLFARDQWLKPGGAILPDTATM 425 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~m--g~~L~~--e~--------~-------l~~vl~a~~r~LkpgG~lip~~~t~ 425 (633)
+... ++.++||+|++... +.+.+. .. . ...++..+.++|||||.++.++|++
T Consensus 322 ~~~~--~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 322 APEI--IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp CSSS--SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cchh--hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 6521 33368999998632 121111 11 1 1568899999999999999888775
No 229
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.02 E-value=1.3e-09 Score=118.72 Aligned_cols=100 Identities=17% Similarity=0.254 Sum_probs=80.6
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
..++.+|||+|||+|.+++.+|+.+. +|+|||+|+.+++.|+++++.|++ . ++++++|++++.
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~~-~V~gvD~s~~ai~~A~~n~~~ngl--------------~-v~~~~~d~~~~~- 350 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRGF-NVKGFDSNEFAIEMARRNVEINNV--------------D-AEFEVASDREVS- 350 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC--------------C-EEEEECCTTTCC-
T ss_pred cCCCCEEEEeeccchHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC--------------c-EEEEECChHHcC-
Confidence 35778999999999999999999855 999999999999999999999887 6 999999999875
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+ .+||+|++.+.-. +....++.++. .|+|||+++.+.
T Consensus 351 ----~-~~fD~Vv~dPPr~-----g~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 351 ----V-KGFDTVIVDPPRA-----GLHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp ----C-TTCSEEEECCCTT-----CSCHHHHHHHH-HHCCSEEEEEES
T ss_pred ----c-cCCCEEEEcCCcc-----chHHHHHHHHH-hcCCCcEEEEEC
Confidence 2 3899999976421 11233455443 489999988653
No 230
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.02 E-value=1.3e-09 Score=118.92 Aligned_cols=118 Identities=18% Similarity=0.160 Sum_probs=86.4
Q ss_pred hHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 006731 282 TDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (633)
Q Consensus 282 ~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~ 361 (633)
++.+.+.+.......++.+|||+|||+|.+++.+++.+ .+|+|+|+|+.+++.|+++++.|++ .+
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~-~~V~gvD~s~~al~~A~~n~~~~~~--------------~~ 335 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQA-ASVVGVEGVPALVEKGQQNARLNGL--------------QN 335 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTC--------------CS
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhC-CEEEEEeCCHHHHHHHHHHHHHcCC--------------Cc
Confidence 33444444444445678899999999999999999984 4999999999999999999999988 68
Q ss_pred EEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 362 MEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 362 I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++++++|+.+......++.++||+|++++.-..+ ..++..+.+ ++|+++++.+
T Consensus 336 v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~------~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 336 VTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGA------AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp EEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCC------HHHHHHHHH-HCCSEEEEEE
T ss_pred eEEEECCHHHHhhhhhhhcCCCCEEEECCCCccH------HHHHHHHHh-cCCCeEEEEE
Confidence 9999999988431111345689999998642222 123333332 6888877643
No 231
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.00 E-value=5.3e-10 Score=108.43 Aligned_cols=99 Identities=18% Similarity=0.245 Sum_probs=71.1
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
..++.+|||+|||+|.++..+++.+. +|+|||+++.. .. .+++++++|+.+...
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~~-~V~gvD~~~~~-----------~~--------------~~v~~~~~D~~~~~~ 76 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLAR-KIISIDLQEME-----------EI--------------AGVRFIRCDIFKETI 76 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTCS-EEEEEESSCCC-----------CC--------------TTCEEEECCTTSSSH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcCC-cEEEEeccccc-----------cC--------------CCeEEEEccccCHHH
Confidence 45789999999999999999999854 99999999741 22 579999999987541
Q ss_pred ccc----cC---CCcccEEEEecccccccC--------hhhHHHHHHHHhhcccCCcEEE
Q 006731 375 SMQ----IQ---PHSVDVLVSEWMGYCLLY--------ESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 375 ~~~----l~---~~~~DvIvse~mg~~L~~--------e~~l~~vl~a~~r~LkpgG~li 419 (633)
... ++ .++||+|+|+........ ......++..+.++|||||.++
T Consensus 77 ~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv 136 (191)
T 3dou_A 77 FDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVL 136 (191)
T ss_dssp HHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEE
Confidence 000 11 148999999743211100 1123567888899999999998
No 232
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.99 E-value=1.3e-09 Score=117.09 Aligned_cols=119 Identities=13% Similarity=0.148 Sum_probs=93.2
Q ss_pred HHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCC---------------------------------------CeE
Q 006731 283 DSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA---------------------------------------SRV 323 (633)
Q Consensus 283 ~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa---------------------------------------~~V 323 (633)
+....+|.......++..|||+|||+|.+++.+|..++ .+|
T Consensus 181 e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 260 (385)
T 3ldu_A 181 ETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI 260 (385)
T ss_dssp HHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCE
T ss_pred HHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceE
Confidence 34566677776777889999999999999999988753 369
Q ss_pred EEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecc-cccccChhhHH
Q 006731 324 IAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWM-GYCLLYESMLS 402 (633)
Q Consensus 324 ~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~m-g~~L~~e~~l~ 402 (633)
+|+|+++.|++.|++++..+|+. +.|+++++|+.++. . +.+||+||+++. |.-+..+..+.
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl~-------------~~i~~~~~D~~~l~----~-~~~~D~Iv~NPPyg~rl~~~~~l~ 322 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGVD-------------EYIEFNVGDATQFK----S-EDEFGFIITNPPYGERLEDKDSVK 322 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCG-------------GGEEEEECCGGGCC----C-SCBSCEEEECCCCCCSHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCCC-------------CceEEEECChhhcC----c-CCCCcEEEECCCCcCccCCHHHHH
Confidence 99999999999999999999986 78999999999987 4 368999999864 22222234566
Q ss_pred HHHHHHhhcccC--CcEEE
Q 006731 403 SVLFARDQWLKP--GGAIL 419 (633)
Q Consensus 403 ~vl~a~~r~Lkp--gG~li 419 (633)
.+...+.+.|++ ||.+.
T Consensus 323 ~ly~~lg~~lk~~~g~~~~ 341 (385)
T 3ldu_A 323 QLYKELGYAFRKLKNWSYY 341 (385)
T ss_dssp HHHHHHHHHHHTSBSCEEE
T ss_pred HHHHHHHHHHhhCCCCEEE
Confidence 677777777776 55544
No 233
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.99 E-value=1.6e-09 Score=108.05 Aligned_cols=108 Identities=20% Similarity=0.194 Sum_probs=83.3
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
+...+... .++.+|||||||+|.|++.++ +..+|+|+|+++.+++.+++++..++. ...+
T Consensus 96 fY~~i~~~---~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~---------------~~~~ 155 (253)
T 3frh_A 96 LYDFIFSA---ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW---------------DFTF 155 (253)
T ss_dssp HHHHHTSS---CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC---------------EEEE
T ss_pred HHHHHhcC---CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC---------------CceE
Confidence 33444443 567899999999999999988 667999999999999999999988874 5788
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
..+|....+ . ++++|+|++..+-++|..+.. ...+ ++...|+++|++|
T Consensus 156 ~v~D~~~~~----~-~~~~DvvLllk~lh~LE~q~~-~~~~-~ll~aL~~~~vvV 203 (253)
T 3frh_A 156 ALQDVLCAP----P-AEAGDLALIFKLLPLLEREQA-GSAM-ALLQSLNTPRMAV 203 (253)
T ss_dssp EECCTTTSC----C-CCBCSEEEEESCHHHHHHHST-THHH-HHHHHCBCSEEEE
T ss_pred EEeecccCC----C-CCCcchHHHHHHHHHhhhhch-hhHH-HHHHHhcCCCEEE
Confidence 999988776 4 479999998765555533322 2233 6666899998887
No 234
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.98 E-value=1.2e-09 Score=105.01 Aligned_cols=102 Identities=23% Similarity=0.262 Sum_probs=72.2
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc-CC---------CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA-GA---------SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a-Ga---------~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
+.++.+|||||||+|.++..+++. |. .+|+|+|+|+.+ .+ .++++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~--------------~~~~~ 74 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL--------------EGATF 74 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC--------------TTCEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC--------------CCCeE
Confidence 467899999999999999999988 54 699999999831 22 45788
Q ss_pred E-Eccccccccc----cccCCCcccEEEEecccccccCh-hh-------HHHHHHHHhhcccCCcEEEee
Q 006731 365 V-QGMVEELGES----MQIQPHSVDVLVSEWMGYCLLYE-SM-------LSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 365 i-~gd~e~l~~~----~~l~~~~~DvIvse~mg~~L~~e-~~-------l~~vl~a~~r~LkpgG~lip~ 421 (633)
+ ++|+.+.... ..++.++||+|+|....+...+. .. ...++..+.++|||||.++..
T Consensus 75 ~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (196)
T 2nyu_A 75 LCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCK 144 (196)
T ss_dssp ECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 8 8887764310 00234689999986422211111 11 147888899999999999843
No 235
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.97 E-value=3.2e-09 Score=113.97 Aligned_cols=119 Identities=17% Similarity=0.217 Sum_probs=94.1
Q ss_pred HHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCC---------------------------------------CeE
Q 006731 283 DSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA---------------------------------------SRV 323 (633)
Q Consensus 283 ~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa---------------------------------------~~V 323 (633)
+....+|.......++..|||.+||+|.+.+.+|..++ .+|
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 34556666665667789999999999999999887644 259
Q ss_pred EEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecc-cccccChhhHH
Q 006731 324 IAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWM-GYCLLYESMLS 402 (633)
Q Consensus 324 ~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~m-g~~L~~e~~l~ 402 (633)
+|+|+++.|++.|+++++.+|+. +.|+++++|+.++. .+ .+||+||+++. |.-+..+..+.
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~-------------~~I~~~~~D~~~l~----~~-~~fD~Iv~NPPYG~rl~~~~~l~ 321 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLE-------------DVVKLKQMRLQDFK----TN-KINGVLISNPPYGERLLDDKAVD 321 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCT-------------TTEEEEECCGGGCC----CC-CCSCEEEECCCCTTTTSCHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCCC-------------CceEEEECChHHCC----cc-CCcCEEEECCchhhccCCHHHHH
Confidence 99999999999999999999997 78999999999987 43 68999999853 33344445667
Q ss_pred HHHHHHhhcccC--CcEEE
Q 006731 403 SVLFARDQWLKP--GGAIL 419 (633)
Q Consensus 403 ~vl~a~~r~Lkp--gG~li 419 (633)
.+...+.+.||+ ||.+.
T Consensus 322 ~ly~~lg~~lk~~~g~~~~ 340 (384)
T 3ldg_A 322 ILYNEMGETFAPLKTWSQF 340 (384)
T ss_dssp HHHHHHHHHHTTCTTSEEE
T ss_pred HHHHHHHHHHhhCCCcEEE
Confidence 777777777776 66655
No 236
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.96 E-value=1.4e-09 Score=116.08 Aligned_cols=107 Identities=15% Similarity=0.178 Sum_probs=79.0
Q ss_pred HHHHHHHHhCCCCCCCCEEEEECCC------cchHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCC
Q 006731 283 DSYRQAILENPSLMKGAVVMDIGCG------TGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEG 354 (633)
Q Consensus 283 ~~y~~aI~~~~~~~~~~~VLDVGcG------tG~lsl~~a~a--Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~ 354 (633)
..|...+... ..++.+||||||| +|..++.+++. ...+|+|||+|+.|. . ..
T Consensus 204 ~~Ye~lL~~l--~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~--~~-------- 263 (419)
T 3sso_A 204 PHYDRHFRDY--RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V--DE-------- 263 (419)
T ss_dssp HHHHHHHGGG--TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G--CB--------
T ss_pred HHHHHHHHhh--cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h--cC--------
Confidence 3454444332 2467899999999 77767766654 335999999999872 1 12
Q ss_pred CCCCCCcEEEEEccccccccccccC------CCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 355 NINNAGKMEVVQGMVEELGESMQIQ------PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 355 ~~~~~~~I~vi~gd~e~l~~~~~l~------~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.+|+++++|+.+++ +. .++||+|++... .+......++..+.++|||||+++...
T Consensus 264 -----~rI~fv~GDa~dlp----f~~~l~~~d~sFDlVisdgs----H~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 264 -----LRIRTIQGDQNDAE----FLDRIARRYGPFDIVIDDGS----HINAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp -----TTEEEEECCTTCHH----HHHHHHHHHCCEEEEEECSC----CCHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred -----CCcEEEEecccccc----hhhhhhcccCCccEEEECCc----ccchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 78999999999876 44 578999998642 223456788999999999999999643
No 237
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.96 E-value=1.8e-09 Score=114.09 Aligned_cols=131 Identities=14% Similarity=0.077 Sum_probs=88.7
Q ss_pred HHHHHHhCCC-CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCC---CCCCCCCCCCCCCCCC
Q 006731 285 YRQAILENPS-LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDND---FWWDRPQSEGNINNAG 360 (633)
Q Consensus 285 y~~aI~~~~~-~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ng---l~~~~~~~~~~~~~~~ 360 (633)
|.++|..... ..++++||+||||+|.++..+++.++.+|++||+++.+++.|++++...+ +. ....+
T Consensus 175 YhE~l~~~~~~~p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~---------dp~~~ 245 (364)
T 2qfm_A 175 YTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLD---------NLKGD 245 (364)
T ss_dssp HHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCS---------SSEET
T ss_pred HHHHHhhhhhhCCCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhcccccc---------ccCCC
Confidence 5555543321 23578999999999999999999988899999999999999999875321 21 00113
Q ss_pred cEEEEEccccccccccccCCCcccEEEEeccc-c-c-----ccChhhHHHHHHHHhhcccCCcEEEeecce
Q 006731 361 KMEVVQGMVEELGESMQIQPHSVDVLVSEWMG-Y-C-----LLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (633)
Q Consensus 361 ~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg-~-~-----L~~e~~l~~vl~a~~r~LkpgG~lip~~~t 424 (633)
+++++.+|..++.....-+.++||+||+.... . . +....-+..++..+.+.|+|||+++...+.
T Consensus 246 rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 246 CYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp TEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 79999999988652110024789999998643 1 1 111222334444448999999999966543
No 238
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.95 E-value=2.1e-09 Score=115.84 Aligned_cols=118 Identities=18% Similarity=0.161 Sum_probs=90.8
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCC---------------------------------------CeEE
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA---------------------------------------SRVI 324 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa---------------------------------------~~V~ 324 (633)
....+|.......++..|||++||+|.+++.+|..++ .+|+
T Consensus 188 ~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 267 (393)
T 3k0b_A 188 TMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNII 267 (393)
T ss_dssp HHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEE
Confidence 3555666665667789999999999999999888644 2599
Q ss_pred EEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecc-cccccChhhHHH
Q 006731 325 AVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWM-GYCLLYESMLSS 403 (633)
Q Consensus 325 aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~m-g~~L~~e~~l~~ 403 (633)
|+|+++.|++.|++++..+|+. ++|+++++|+.++. .+ .+||+||+++. |.-+..+..+..
T Consensus 268 GvDid~~al~~Ar~Na~~~gl~-------------~~I~~~~~D~~~~~----~~-~~fD~Iv~NPPYg~rl~~~~~l~~ 329 (393)
T 3k0b_A 268 GGDIDARLIEIAKQNAVEAGLG-------------DLITFRQLQVADFQ----TE-DEYGVVVANPPYGERLEDEEAVRQ 329 (393)
T ss_dssp EEESCHHHHHHHHHHHHHTTCT-------------TCSEEEECCGGGCC----CC-CCSCEEEECCCCCCSHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHcCCC-------------CceEEEECChHhCC----CC-CCCCEEEECCCCccccCCchhHHH
Confidence 9999999999999999999996 78999999999987 43 68999999863 222222234556
Q ss_pred HHHHHhhcccC--CcEEE
Q 006731 404 VLFARDQWLKP--GGAIL 419 (633)
Q Consensus 404 vl~a~~r~Lkp--gG~li 419 (633)
+...+.+.||+ ||.++
T Consensus 330 ly~~lg~~lk~~~g~~~~ 347 (393)
T 3k0b_A 330 LYREMGIVYKRMPTWSVY 347 (393)
T ss_dssp HHHHHHHHHHTCTTCEEE
T ss_pred HHHHHHHHHhcCCCCEEE
Confidence 66666666665 66655
No 239
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.95 E-value=2.7e-09 Score=99.65 Aligned_cols=102 Identities=21% Similarity=0.277 Sum_probs=74.6
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHc-CC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQA-GA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~a-Ga-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
...++.+|||+|||+|.++..+++. |. .+|+|+|.++ ++. . .+++++++|+.+
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~--------------~~~~~~~~d~~~ 73 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------I--------------VGVDFLQGDFRD 73 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------C--------------TTEEEEESCTTS
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------c--------------CcEEEEEccccc
Confidence 3567889999999999999999988 54 6999999999 652 1 468999999987
Q ss_pred ccc----ccccCCCcccEEEEecccccccCh--h------hHHHHHHHHhhcccCCcEEEe
Q 006731 372 LGE----SMQIQPHSVDVLVSEWMGYCLLYE--S------MLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 372 l~~----~~~l~~~~~DvIvse~mg~~L~~e--~------~l~~vl~a~~r~LkpgG~lip 420 (633)
.+. ...++.++||+|++...-+..... . ....++..+.++|+|||.++.
T Consensus 74 ~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (180)
T 1ej0_A 74 ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVV 134 (180)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred chhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 530 000245789999986532222111 0 115788999999999999984
No 240
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.95 E-value=1e-09 Score=117.90 Aligned_cols=104 Identities=14% Similarity=0.040 Sum_probs=85.6
Q ss_pred CCCCEEEEECCCcchHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc-EEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK-MEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a--Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~-I~vi~gd~e~l 372 (633)
.+|.+|||++||+|.+++.+++. |+++|++||+++.+++.++++++.|++. ++ ++++++|+.++
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~-------------~~~v~v~~~Da~~~ 117 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP-------------EDRYEIHGMEANFF 117 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC-------------GGGEEEECSCHHHH
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC-------------CceEEEEeCCHHHH
Confidence 35789999999999999999984 6789999999999999999999999996 66 99999999886
Q ss_pred cc-ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 373 GE-SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 373 ~~-~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
.. . + .++||+|+..+.+ ....++....+.|+|||+++.+.
T Consensus 118 l~~~--~-~~~fD~V~lDP~g-------~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 118 LRKE--W-GFGFDYVDLDPFG-------TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp HHSC--C-SSCEEEEEECCSS-------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHh--h-CCCCcEEEECCCc-------CHHHHHHHHHHHhCCCCEEEEEe
Confidence 42 1 2 3679999988722 12347778888999999777543
No 241
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.94 E-value=1.6e-09 Score=118.07 Aligned_cols=116 Identities=17% Similarity=0.146 Sum_probs=89.8
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
...++.+|||+|||+|..+..+++.+. .+|+|+|+++.+++.++++++.+|+. ++++++|+.++
T Consensus 243 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~---------------~~~~~~D~~~~ 307 (429)
T 1sqg_A 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK---------------ATVKQGDGRYP 307 (429)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCC---------------CEEEECCTTCT
T ss_pred CCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCC---------------eEEEeCchhhc
Confidence 356789999999999999999998753 69999999999999999999988862 68899999876
Q ss_pred ccccccCCCcccEEEEecc--ccccc--Ch--------hh-------HHHHHHHHhhcccCCcEEEeecceeE
Q 006731 373 GESMQIQPHSVDVLVSEWM--GYCLL--YE--------SM-------LSSVLFARDQWLKPGGAILPDTATMF 426 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~m--g~~L~--~e--------~~-------l~~vl~a~~r~LkpgG~lip~~~t~~ 426 (633)
... ++.++||+|+++.. +.+.. .. .. ...++..+.++|||||.++.++|++.
T Consensus 308 ~~~--~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 308 SQW--CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp HHH--HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred hhh--cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 521 23468999998642 11111 11 11 14788999999999999998887763
No 242
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.94 E-value=9.4e-10 Score=110.67 Aligned_cols=114 Identities=11% Similarity=0.073 Sum_probs=87.1
Q ss_pred hHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 006731 282 TDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG 360 (633)
Q Consensus 282 ~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~ 360 (633)
.+.+...|.... ....+|||||||+|.|++.++.. +..+|+|+|+++.|++.+++++..+|+.
T Consensus 119 lD~fY~~i~~~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~-------------- 182 (281)
T 3lcv_B 119 LDEFYRELFRHL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP-------------- 182 (281)
T ss_dssp HHHHHHHHGGGS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC--------------
T ss_pred HHHHHHHHHhcc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--------------
Confidence 344555555543 44679999999999999999888 5679999999999999999999999873
Q ss_pred cEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 361 KMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 361 ~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
.++...|...-. +.+++|++++..+-++|..+.. ...+ .+...|+|+|++|
T Consensus 183 -~~~~v~D~~~~~-----p~~~~DvaL~lkti~~Le~q~k-g~g~-~ll~aL~~~~vvV 233 (281)
T 3lcv_B 183 -HRTNVADLLEDR-----LDEPADVTLLLKTLPCLETQQR-GSGW-EVIDIVNSPNIVV 233 (281)
T ss_dssp -EEEEECCTTTSC-----CCSCCSEEEETTCHHHHHHHST-THHH-HHHHHSSCSEEEE
T ss_pred -ceEEEeeecccC-----CCCCcchHHHHHHHHHhhhhhh-HHHH-HHHHHhCCCCEEE
Confidence 677888876554 4689999998765444432211 1233 6778899999988
No 243
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.94 E-value=2.6e-09 Score=114.20 Aligned_cols=101 Identities=18% Similarity=0.222 Sum_probs=77.3
Q ss_pred CCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccc
Q 006731 298 GAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQ 377 (633)
Q Consensus 298 ~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~ 377 (633)
+.+|||+|||+|.+++.+|+. +.+|+|||+|+.+++.|+++++.|++ .+++++.+|++++...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~--------------~~v~~~~~d~~~~~~~-- 276 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHI--------------DNVQIIRMAAEEFTQA-- 276 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTC--------------CSEEEECCCSHHHHHH--
T ss_pred CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC--------------CceEEEECCHHHHHHH--
Confidence 678999999999999999984 56999999999999999999999998 6899999999876321
Q ss_pred cCC--------------CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeecce
Q 006731 378 IQP--------------HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (633)
Q Consensus 378 l~~--------------~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~~t 424 (633)
+.. .+||+||..+.-..+ . ..+.+.|+++|.++..+|+
T Consensus 277 ~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~-----~----~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 277 MNGVREFNRLQGIDLKSYQCETIFVDPPRSGL-----D----SETEKMVQAYPRILYISCN 328 (369)
T ss_dssp HSSCCCCTTGGGSCGGGCCEEEEEECCCTTCC-----C----HHHHHHHTTSSEEEEEESC
T ss_pred HhhccccccccccccccCCCCEEEECcCcccc-----H----HHHHHHHhCCCEEEEEECC
Confidence 111 379999987532211 1 2234456688888755543
No 244
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.93 E-value=7.2e-09 Score=104.34 Aligned_cols=84 Identities=19% Similarity=0.256 Sum_probs=68.4
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
+.+.|.......++.+|||||||+|.++..+++.+ .+|+|||+++.+++.|++++.. . +++++
T Consensus 18 ~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~--~--------------~~v~~ 80 (244)
T 1qam_A 18 NIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVD--H--------------DNFQV 80 (244)
T ss_dssp HHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTT--C--------------CSEEE
T ss_pred HHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhcc--C--------------CCeEE
Confidence 45566666667788999999999999999999998 4999999999999999987753 2 67999
Q ss_pred EEccccccccccccCC-CcccEEEEec
Q 006731 365 VQGMVEELGESMQIQP-HSVDVLVSEW 390 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~-~~~DvIvse~ 390 (633)
+++|+.+++ ++. ..| .||+++
T Consensus 81 ~~~D~~~~~----~~~~~~~-~vv~nl 102 (244)
T 1qam_A 81 LNKDILQFK----FPKNQSY-KIFGNI 102 (244)
T ss_dssp ECCCGGGCC----CCSSCCC-EEEEEC
T ss_pred EEChHHhCC----cccCCCe-EEEEeC
Confidence 999999887 553 345 566664
No 245
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.93 E-value=2.5e-09 Score=103.32 Aligned_cols=101 Identities=18% Similarity=0.325 Sum_probs=71.4
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc-C--CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA-G--ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a-G--a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
+.++.+|||||||+|.++..+++. + ..+|+|+|+|+.+ .. .+++++++|+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~--------------~~v~~~~~d~~~ 74 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI--------------PNVYFIQGEIGK 74 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC--------------TTCEEEECCTTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC--------------CCceEEEccccc
Confidence 457789999999999999999987 3 3599999999831 12 568899999877
Q ss_pred cccc---------------------cccCCCcccEEEEecccccccC--hhh------HHHHHHHHhhcccCCcEEEe
Q 006731 372 LGES---------------------MQIQPHSVDVLVSEWMGYCLLY--ESM------LSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 372 l~~~---------------------~~l~~~~~DvIvse~mg~~L~~--e~~------l~~vl~a~~r~LkpgG~lip 420 (633)
.... ..++.++||+|++....+.... ... ...++..+.++|||||.++.
T Consensus 75 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 75 DNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp TSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 5300 0024568999999753222100 111 12478889999999999984
No 246
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.92 E-value=2.4e-09 Score=110.83 Aligned_cols=85 Identities=21% Similarity=0.410 Sum_probs=72.0
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
..+.|.......++.+|||||||+|.++..+++.+. +|+|||+++.+++.|++++.. . +++++
T Consensus 38 i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~-~V~aVEid~~li~~a~~~~~~--~--------------~~v~v 100 (295)
T 3gru_A 38 FVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAK-KVYVIEIDKSLEPYANKLKEL--Y--------------NNIEI 100 (295)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCGGGHHHHHHHHHH--C--------------SSEEE
T ss_pred HHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhcc--C--------------CCeEE
Confidence 444555555677889999999999999999999864 999999999999999998872 2 67999
Q ss_pred EEccccccccccccCCCcccEEEEec
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEW 390 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~ 390 (633)
+++|+.+++ ++..+||+||++.
T Consensus 101 i~gD~l~~~----~~~~~fD~Iv~Nl 122 (295)
T 3gru_A 101 IWGDALKVD----LNKLDFNKVVANL 122 (295)
T ss_dssp EESCTTTSC----GGGSCCSEEEEEC
T ss_pred EECchhhCC----cccCCccEEEEeC
Confidence 999999887 6666799999874
No 247
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.92 E-value=2.2e-09 Score=115.00 Aligned_cols=101 Identities=16% Similarity=0.030 Sum_probs=83.4
Q ss_pred CCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhC---------------CCCCCCCCCCCCCCCCC
Q 006731 297 KGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDN---------------DFWWDRPQSEGNINNAG 360 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~n---------------gl~~~~~~~~~~~~~~~ 360 (633)
++.+|||+|||+|.+++.+++. |+.+|+++|+++.+++.|+++++.| ++ .
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl--------------~ 112 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE--------------K 112 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS--------------S
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC--------------C
Confidence 6889999999999999999997 7678999999999999999999998 66 3
Q ss_pred cEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 361 KMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 361 ~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+++++++|+.++... . .++||+|+..+.+. ...++.+..+.|+|||+++.+
T Consensus 113 ~i~v~~~Da~~~~~~--~-~~~fD~I~lDP~~~-------~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 113 TIVINHDDANRLMAE--R-HRYFHFIDLDPFGS-------PMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp EEEEEESCHHHHHHH--S-TTCEEEEEECCSSC-------CHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEcCcHHHHHHh--c-cCCCCEEEeCCCCC-------HHHHHHHHHHhcCCCCEEEEE
Confidence 499999999886521 1 35799999766422 246778888899999987753
No 248
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.91 E-value=6.7e-09 Score=108.33 Aligned_cols=116 Identities=13% Similarity=0.074 Sum_probs=86.7
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~a--Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
...+|.+|||+|||+|..++.+|+. +..+|+|+|+++.+++.++++++.+|+ .+|+++++|+.+
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~--------------~~v~~~~~D~~~ 164 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV--------------SCCELAEEDFLA 164 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC--------------CSEEEEECCGGG
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CeEEEEeCChHh
Confidence 3568899999999999999999885 446999999999999999999999998 679999999988
Q ss_pred cccccccC-CCcccEEEEecc--cccccC------------hhh-------HHHHHHHHhhcccCCcEEEeecceeE
Q 006731 372 LGESMQIQ-PHSVDVLVSEWM--GYCLLY------------ESM-------LSSVLFARDQWLKPGGAILPDTATMF 426 (633)
Q Consensus 372 l~~~~~l~-~~~~DvIvse~m--g~~L~~------------e~~-------l~~vl~a~~r~LkpgG~lip~~~t~~ 426 (633)
+... .+ ..+||+|++... +.+... ... ...+|....++|+ ||+++.++|++.
T Consensus 165 ~~~~--~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 165 VSPS--DPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp SCTT--CGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred cCcc--ccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 7521 11 147999998532 111110 001 1246777778887 999998888764
No 249
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.91 E-value=3.4e-09 Score=108.19 Aligned_cols=110 Identities=16% Similarity=0.149 Sum_probs=78.0
Q ss_pred CEEEEECCCc---chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 299 AVVMDIGCGT---GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 299 ~~VLDVGcGt---G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
..|||||||+ |.+...+.+. ...+|++||.|+.|++.|++++...+. .+++++++|+.++..
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~--------------~~~~~v~aD~~~~~~ 145 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE--------------GRTAYVEADMLDPAS 145 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS--------------SEEEEEECCTTCHHH
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC--------------CcEEEEEecccChhh
Confidence 6899999997 4454444433 334999999999999999998865432 689999999988631
Q ss_pred ccccC--CCccc-----EEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 375 SMQIQ--PHSVD-----VLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 375 ~~~l~--~~~~D-----vIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
....+ .+.|| .|+++.+-+++..+..+..++..+.+.|+|||.++.+.
T Consensus 146 ~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 146 ILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp HHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred hhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 00000 12333 46666655556544446789999999999999999664
No 250
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.87 E-value=6.7e-09 Score=109.83 Aligned_cols=111 Identities=16% Similarity=0.155 Sum_probs=79.9
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEE
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~ 366 (633)
.+.......++.+|||||||+|.++..+++.. ..+++++|.+ .++. ++.++..++. ++|+++.
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~-------------~~v~~~~ 238 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVA-------------GRWKVVE 238 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGT-------------TSEEEEE
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCC-------------CCeEEEe
Confidence 34444455678899999999999999999874 3489999994 4442 3333333443 7899999
Q ss_pred ccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 367 GMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 367 gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+|+. .+ +| +||+|++..+-+.+ .......++..+.+.|||||.++...
T Consensus 239 ~d~~-~~----~p--~~D~v~~~~vlh~~-~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 239 GDFL-RE----VP--HADVHVLKRILHNW-GDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp CCTT-TC----CC--CCSEEEEESCGGGS-CHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred cCCC-CC----CC--CCcEEEEehhccCC-CHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9997 33 45 89999986543322 23334689999999999999998543
No 251
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.86 E-value=1.6e-09 Score=110.34 Aligned_cols=98 Identities=10% Similarity=-0.063 Sum_probs=77.3
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKD--NDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~--ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
..+++|||||||+|.++..+++.+ .+|++||+++.+++.|++.+.. +++. .++++++.+|..+..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~------------~~rv~~~~~D~~~~~ 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKN------------NKNFTHAKQLLDLDI 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHT------------CTTEEEESSGGGSCC
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccC------------CCeEEEEechHHHHH
Confidence 356899999999999999988887 8999999999999999876532 1111 168999999987642
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++||+|++... ....++..+.+.|+|||+++..
T Consensus 138 -------~~fD~Ii~d~~--------dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 138 -------KKYDLIFCLQE--------PDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp -------CCEEEEEESSC--------CCHHHHHHHHTTEEEEEEEEEE
T ss_pred -------hhCCEEEECCC--------ChHHHHHHHHHhcCCCcEEEEE
Confidence 68999998632 1123888999999999999853
No 252
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.84 E-value=2.1e-09 Score=105.07 Aligned_cols=85 Identities=26% Similarity=0.301 Sum_probs=69.2
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++.+|||||||+|.++..++ .+|+|+|+|+. . ++++++++.+++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~------------~-----------------~~~~~~d~~~~~-- 110 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL------------D-----------------PRVTVCDMAQVP-- 110 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS------------S-----------------TTEEESCTTSCS--
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC------------C-----------------ceEEEeccccCC--
Confidence 567899999999999988772 48999999986 1 356889998877
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
++.++||+|++..+ +.+ ..+..++..+.++|+|||.++..
T Consensus 111 --~~~~~fD~v~~~~~---l~~-~~~~~~l~~~~~~L~~gG~l~i~ 150 (215)
T 2zfu_A 111 --LEDESVDVAVFCLS---LMG-TNIRDFLEEANRVLKPGGLLKVA 150 (215)
T ss_dssp --CCTTCEEEEEEESC---CCS-SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCCCCEeEEEEehh---ccc-cCHHHHHHHHHHhCCCCeEEEEE
Confidence 67789999998543 222 56788999999999999999854
No 253
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.81 E-value=3.8e-10 Score=113.60 Aligned_cols=108 Identities=16% Similarity=0.203 Sum_probs=79.0
Q ss_pred HHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
|.......++.+|||||||+|.++..+++.| .+|+|||+++.+++.|++++. + . .+++++++|
T Consensus 21 i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~--~-~-------------~~v~~~~~D 83 (245)
T 1yub_A 21 IIKQLNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK--L-N-------------TRVTLIHQD 83 (245)
T ss_dssp HHHHCCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT--T-C-------------SEEEECCSC
T ss_pred HHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc--c-C-------------CceEEEECC
Confidence 4444456678899999999999999999998 599999999999988776554 1 2 689999999
Q ss_pred ccccccccccCC-CcccEEEEecccccccChhhHHHHH--------------HHHhhcccCCcEEEe
Q 006731 369 VEELGESMQIQP-HSVDVLVSEWMGYCLLYESMLSSVL--------------FARDQWLKPGGAILP 420 (633)
Q Consensus 369 ~e~l~~~~~l~~-~~~DvIvse~mg~~L~~e~~l~~vl--------------~a~~r~LkpgG~lip 420 (633)
+.+++ ++. ++| .||+++. |... ...+..++ ..+.|+|+|||.+..
T Consensus 84 ~~~~~----~~~~~~f-~vv~n~P-y~~~-~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 84 ILQFQ----FPNKQRY-KIVGNIP-YHLS-TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp CTTTT----CCCSSEE-EEEEECC-SSSC-HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred hhhcC----cccCCCc-EEEEeCC-cccc-HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 99887 553 678 7777643 3222 22233332 446788888887653
No 254
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.80 E-value=9.2e-09 Score=104.36 Aligned_cols=86 Identities=16% Similarity=0.180 Sum_probs=67.1
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEE
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~ 366 (633)
+.|.......++.+|||||||+|.++..+++.++ +|+|||+++.|++.+++++.. . +++++++
T Consensus 19 ~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~avEid~~~~~~~~~~~~~--~--------------~~v~~i~ 81 (255)
T 3tqs_A 19 QKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD-NLALVEIDRDLVAFLQKKYNQ--Q--------------KNITIYQ 81 (255)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSS-EEEEEECCHHHHHHHHHHHTT--C--------------TTEEEEE
T ss_pred HHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHhh--C--------------CCcEEEE
Confidence 3344444567889999999999999999999874 999999999999999998764 2 6899999
Q ss_pred ccccccccccccCCCcccEEEEec
Q 006731 367 GMVEELGESMQIQPHSVDVLVSEW 390 (633)
Q Consensus 367 gd~e~l~~~~~l~~~~~DvIvse~ 390 (633)
+|+.+++-....+.++|| ||+++
T Consensus 82 ~D~~~~~~~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 82 NDALQFDFSSVKTDKPLR-VVGNL 104 (255)
T ss_dssp SCTTTCCGGGSCCSSCEE-EEEEC
T ss_pred cchHhCCHHHhccCCCeE-EEecC
Confidence 999998711101135688 77764
No 255
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.80 E-value=1.5e-08 Score=103.62 Aligned_cols=95 Identities=21% Similarity=0.270 Sum_probs=72.1
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEE
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~ 366 (633)
+.|.......++ +|||||||+|.++..+++.|+ +|+|||+++.|++.+++++.. .++++++
T Consensus 37 ~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~~-----------------~~v~vi~ 97 (271)
T 3fut_A 37 RRIVEAARPFTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLSG-----------------LPVRLVF 97 (271)
T ss_dssp HHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTTT-----------------SSEEEEE
T ss_pred HHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCC-----------------CCEEEEE
Confidence 334444456678 999999999999999999985 899999999999999887641 5799999
Q ss_pred ccccccccccccCC-CcccEEEEecccccccChhhHHHHHH
Q 006731 367 GMVEELGESMQIQP-HSVDVLVSEWMGYCLLYESMLSSVLF 406 (633)
Q Consensus 367 gd~e~l~~~~~l~~-~~~DvIvse~mg~~L~~e~~l~~vl~ 406 (633)
+|+.+++ ++. ..+|.||+++. |.. ....+..++.
T Consensus 98 ~D~l~~~----~~~~~~~~~iv~NlP-y~i-ss~il~~ll~ 132 (271)
T 3fut_A 98 QDALLYP----WEEVPQGSLLVANLP-YHI-ATPLVTRLLK 132 (271)
T ss_dssp SCGGGSC----GGGSCTTEEEEEEEC-SSC-CHHHHHHHHH
T ss_pred CChhhCC----hhhccCccEEEecCc-ccc-cHHHHHHHhc
Confidence 9999887 542 26899999863 433 2233444444
No 256
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.79 E-value=1.1e-08 Score=109.20 Aligned_cols=107 Identities=15% Similarity=0.145 Sum_probs=79.3
Q ss_pred HHHHhCCC-CCCCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 287 QAILENPS-LMKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 287 ~aI~~~~~-~~~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
..+..... ..++.+|||||||+|.++..+++.+. .+++++|+ +.+++.|++ . .+|++
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~--------------~~v~~ 256 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------L--------------SGIEH 256 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------C--------------TTEEE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------c--------------CCCEE
Confidence 33444333 45678999999999999999998853 48999999 888865542 2 46999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+.+|+.+ + +|. ||+|++..+-+.+ .......++..+.+.|+|||.++...
T Consensus 257 ~~~d~~~-~----~~~--~D~v~~~~~lh~~-~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 257 VGGDMFA-S----VPQ--GDAMILKAVCHNW-SDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp EECCTTT-C----CCC--EEEEEEESSGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCCccc-C----CCC--CCEEEEecccccC-CHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999987 5 553 9999986543322 22233489999999999999998653
No 257
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.78 E-value=2.2e-08 Score=106.81 Aligned_cols=107 Identities=18% Similarity=0.238 Sum_probs=79.9
Q ss_pred HHHHhCCC-CCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 287 QAILENPS-LMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 287 ~aI~~~~~-~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
..+..... ..++.+|||||||+|.++..+++.. ..+++++|. +.+++.|++ . .+|++
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~--------------~~v~~ 250 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA------F--------------SGVEH 250 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------C--------------TTEEE
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh------c--------------CCCEE
Confidence 44455444 5567899999999999999999873 348999999 877755432 1 57999
Q ss_pred EEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+.+|+.+ + +|.. |+|++..+-|.+ .......++..+.+.|+|||.++...
T Consensus 251 ~~~d~~~-~----~p~~--D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 251 LGGDMFD-G----VPKG--DAIFIKWICHDW-SDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp EECCTTT-C----CCCC--SEEEEESCGGGB-CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EecCCCC-C----CCCC--CEEEEechhhcC-CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999986 5 5633 999987654432 33445688999999999999998543
No 258
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.78 E-value=1.9e-09 Score=109.63 Aligned_cols=81 Identities=20% Similarity=0.124 Sum_probs=68.3
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCH-------HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASE-------KMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~-------~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g 367 (633)
..++.+|||+|||+|.+++.+|+.|. +|+|+|+|+ .+++.|+++++.+++. ++|+++++
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~-------------~ri~~~~~ 146 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTA-------------ARINLHFG 146 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH-------------TTEEEEES
T ss_pred cCCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCc-------------cCeEEEEC
Confidence 45678999999999999999999976 899999999 9999999988888875 67999999
Q ss_pred cccccccccccCC--CcccEEEEecc
Q 006731 368 MVEELGESMQIQP--HSVDVLVSEWM 391 (633)
Q Consensus 368 d~e~l~~~~~l~~--~~~DvIvse~m 391 (633)
|++++... ++. ++||+|++++|
T Consensus 147 d~~~~l~~--~~~~~~~fD~V~~dP~ 170 (258)
T 2r6z_A 147 NAAEQMPA--LVKTQGKPDIVYLDPM 170 (258)
T ss_dssp CHHHHHHH--HHHHHCCCSEEEECCC
T ss_pred CHHHHHHh--hhccCCCccEEEECCC
Confidence 99886311 222 68999999875
No 259
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.77 E-value=1.4e-08 Score=107.21 Aligned_cols=104 Identities=20% Similarity=0.196 Sum_probs=80.2
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCC------CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGA------SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa------~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~ 369 (633)
.++.+|||+|||+|.++..+++... .+|+|+|+++.+++.|+.++..+|+ ++.++++|.
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~---------------~~~i~~~D~ 193 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ---------------KMTLLHQDG 193 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC---------------CCEEEESCT
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC---------------CceEEECCC
Confidence 4668999999999999998887632 5899999999999999999887765 378899998
Q ss_pred cccccccccCCCcccEEEEecc-cccccChh---------------hHHHHHHHHhhcccCCcEEEe
Q 006731 370 EELGESMQIQPHSVDVLVSEWM-GYCLLYES---------------MLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 370 e~l~~~~~l~~~~~DvIvse~m-g~~L~~e~---------------~l~~vl~a~~r~LkpgG~lip 420 (633)
.... +.++||+|++++. ++.- ... ....++..+.++|+|||+++.
T Consensus 194 l~~~-----~~~~fD~Ii~NPPfg~~~-~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~ 254 (344)
T 2f8l_A 194 LANL-----LVDPVDVVISDLPVGYYP-DDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFF 254 (344)
T ss_dssp TSCC-----CCCCEEEEEEECCCSEES-CHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCcc-----ccCCccEEEECCCCCCcC-chhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEE
Confidence 6643 3578999999853 3421 111 112578888999999998874
No 260
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.73 E-value=3.4e-08 Score=105.24 Aligned_cols=99 Identities=15% Similarity=0.172 Sum_probs=76.5
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
..++.+|||||||+|.++..+++.. ..+++++|. +.+++.|++ . .+|+++.+|+.+ +
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~--------------~~v~~~~~D~~~-~ 256 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ------F--------------PGVTHVGGDMFK-E 256 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------C--------------TTEEEEECCTTT-C
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh------c--------------CCeEEEeCCcCC-C
Confidence 5567899999999999999999873 348999999 777755432 1 679999999987 5
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+|.. |+|++..+-+.+ .......++..+.+.|||||.++...
T Consensus 257 ----~p~~--D~v~~~~vlh~~-~d~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 257 ----VPSG--DTILMKWILHDW-SDQHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp ----CCCC--SEEEEESCGGGS-CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ----CCCC--CEEEehHHhccC-CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 6643 999986553332 33456789999999999999998543
No 261
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.72 E-value=8.8e-08 Score=101.60 Aligned_cols=113 Identities=17% Similarity=0.135 Sum_probs=85.7
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
..+..........+|||||||+|.++..++++.. .+++..|. |.+++.|++++...+ . ++|+++
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~-------------~rv~~~ 233 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-E-------------EQIDFQ 233 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---C-------------CSEEEE
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-c-------------Cceeee
Confidence 4455555566678999999999999999998843 47888887 778889998876544 3 899999
Q ss_pred EccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 366 ~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.+|+.+.+ . ..+|+|+...+-|.. .......+|..+.+.|+|||.++..
T Consensus 234 ~gD~~~~~----~--~~~D~~~~~~vlh~~-~d~~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 234 EGDFFKDP----L--PEADLYILARVLHDW-ADGKCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp ESCTTTSC----C--CCCSEEEEESSGGGS-CHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cCccccCC----C--CCceEEEeeeecccC-CHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 99997654 3 458999976554432 2334567899999999999998854
No 262
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.70 E-value=2.3e-08 Score=103.26 Aligned_cols=108 Identities=12% Similarity=0.114 Sum_probs=73.9
Q ss_pred hhHHHHHHHH-hCCCCCCCCEEEEECC------CcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCC
Q 006731 281 RTDSYRQAIL-ENPSLMKGAVVMDIGC------GTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQS 352 (633)
Q Consensus 281 R~~~y~~aI~-~~~~~~~~~~VLDVGc------GtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~ 352 (633)
++..+.+.+. ....+.++.+|||+|| |+|. ...+.+.+ ..+|+|||+|+. +
T Consensus 46 ~y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~-------------v------- 104 (290)
T 2xyq_A 46 KYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF-------------V------- 104 (290)
T ss_dssp HHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC-------------B-------
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCC-------------C-------
Confidence 3333444442 3345678899999999 4466 33344445 359999999986 1
Q ss_pred CCCCCCCCcEEE-EEccccccccccccCCCcccEEEEeccccc--------ccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 353 EGNINNAGKMEV-VQGMVEELGESMQIQPHSVDVLVSEWMGYC--------LLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 353 ~~~~~~~~~I~v-i~gd~e~l~~~~~l~~~~~DvIvse~mg~~--------L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.++++ +++|+.+++ ++ ++||+|+|+..... ......+..++..+.++|||||.++..
T Consensus 105 -------~~v~~~i~gD~~~~~----~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~ 170 (290)
T 2xyq_A 105 -------SDADSTLIGDCATVH----TA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 170 (290)
T ss_dssp -------CSSSEEEESCGGGCC----CS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------CCCEEEEECccccCC----cc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 34778 999999876 44 78999999743111 011234568899999999999999953
No 263
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.70 E-value=6.1e-09 Score=98.66 Aligned_cols=89 Identities=17% Similarity=0.197 Sum_probs=70.9
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.+.+|.+|||||||+ | ++|.|+.|++.|+++.. .+++++++|+++++
T Consensus 9 g~~~g~~vL~~~~g~--------------v-~vD~s~~ml~~a~~~~~------------------~~~~~~~~d~~~~~ 55 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS--------------S-PVEALKGLVDKLQALTG------------------NEGRVSVENIKQLL 55 (176)
T ss_dssp TCCTTSEEEEEECTT--------------S-CHHHHHHHHHHHHHHTT------------------TTSEEEEEEGGGGG
T ss_pred CCCCCCEEEEecCCc--------------e-eeeCCHHHHHHHHHhcc------------------cCcEEEEechhcCc
Confidence 467899999999995 2 39999999999988753 34889999999887
Q ss_pred ccccc---CCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 374 ESMQI---QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 374 ~~~~l---~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+ +.++||+|++...-+++ ...+..++.++.|+|||||.++..
T Consensus 56 ----~~~~~~~~fD~V~~~~~l~~~--~~~~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 56 ----QSAHKESSFDIILSGLVPGST--TLHSAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp ----GGCCCSSCEEEEEECCSTTCC--CCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ----cccCCCCCEeEEEECChhhhc--ccCHHHHHHHHHHHCCCCEEEEEE
Confidence 5 67899999985432222 134578999999999999999973
No 264
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.67 E-value=3.4e-08 Score=106.73 Aligned_cols=97 Identities=20% Similarity=0.241 Sum_probs=73.1
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a--Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
..++.+|||+|||+|.+++.+++. +..+|+|+|+++.+++.| .+++++++|+.+.
T Consensus 37 ~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-----------------------~~~~~~~~D~~~~ 93 (421)
T 2ih2_A 37 APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-----------------------PWAEGILADFLLW 93 (421)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-----------------------TTEEEEESCGGGC
T ss_pred cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-----------------------CCCcEEeCChhhc
Confidence 345679999999999999999985 345999999999887544 2488999999876
Q ss_pred ccccccCCCcccEEEEecccccccC----------hhh-----------------HHHHHHHHhhcccCCcEEEe
Q 006731 373 GESMQIQPHSVDVLVSEWMGYCLLY----------ESM-----------------LSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~~L~~----------e~~-----------------l~~vl~a~~r~LkpgG~lip 420 (633)
. +.++||+||+++. |+... +.. ...++..+.++|+|||.++.
T Consensus 94 ~-----~~~~fD~Ii~NPP-y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 94 E-----PGEAFDLILGNPP-YGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVF 162 (421)
T ss_dssp C-----CSSCEEEEEECCC-CCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEE
T ss_pred C-----ccCCCCEEEECcC-ccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEE
Confidence 5 3478999999852 21111 111 12568888999999999873
No 265
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.67 E-value=2.4e-08 Score=109.31 Aligned_cols=113 Identities=19% Similarity=0.122 Sum_probs=83.7
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHc--------------CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA--------------GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSE 353 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a--------------Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~ 353 (633)
.|.+.....++.+|||+|||+|.+.+.+++. ...+++|+|+++.+++.|+.++..+|+.
T Consensus 162 ~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~------- 234 (445)
T 2okc_A 162 AMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG------- 234 (445)
T ss_dssp HHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC-------
T ss_pred HHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC-------
Confidence 3433334567789999999999998888764 1247999999999999999999888873
Q ss_pred CCCCCCC-cEEEEEccccccccccccCCCcccEEEEecccccccChh---------------hHHHHHHHHhhcccCCcE
Q 006731 354 GNINNAG-KMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYES---------------MLSSVLFARDQWLKPGGA 417 (633)
Q Consensus 354 ~~~~~~~-~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~---------------~l~~vl~a~~r~LkpgG~ 417 (633)
. .+.++++|....+ . ..+||+|++++. |...... ....++..+.++|||||+
T Consensus 235 ------~~~~~i~~gD~l~~~----~-~~~fD~Iv~NPP-f~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~ 302 (445)
T 2okc_A 235 ------TDRSPIVCEDSLEKE----P-STLVDVILANPP-FGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGR 302 (445)
T ss_dssp ------SSCCSEEECCTTTSC----C-SSCEEEEEECCC-SSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEE
T ss_pred ------cCCCCEeeCCCCCCc----c-cCCcCEEEECCC-CCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCE
Confidence 2 6778999987765 3 358999999853 1111110 113678888899999998
Q ss_pred EE
Q 006731 418 IL 419 (633)
Q Consensus 418 li 419 (633)
+.
T Consensus 303 ~a 304 (445)
T 2okc_A 303 AA 304 (445)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 266
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.65 E-value=4.9e-08 Score=103.30 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=75.8
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
..++.+|||||||+|.++..+++.. ..+|+++|+ +.+++.|++ . .+++++.+|+.+ +
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~--------------~~v~~~~~d~~~-~ 243 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------S--------------NNLTYVGGDMFT-S 243 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------B--------------TTEEEEECCTTT-C
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------C--------------CCcEEEeccccC-C
Confidence 3456899999999999999999873 348999999 888866543 2 459999999976 4
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccC---CcEEEeec
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKP---GGAILPDT 422 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~Lkp---gG~lip~~ 422 (633)
+| .||+|++..+-+.+ .......++..+.+.||| ||.++...
T Consensus 244 ----~p--~~D~v~~~~~lh~~-~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 244 ----IP--NADAVLLKYILHNW-TDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp ----CC--CCSEEEEESCGGGS-CHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred ----CC--CccEEEeehhhccC-CHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 55 39999986553333 222344899999999999 99988653
No 267
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.64 E-value=2.4e-08 Score=107.61 Aligned_cols=78 Identities=18% Similarity=0.177 Sum_probs=66.7
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhC--CCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDN--DFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~n--gl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
+|.+|||+|||+|..++.+++.|+ +|+|||+|+.+++.|+++++.+ |+ ++++++++|+.+...
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl--------------~~i~~i~~Da~~~L~ 157 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEG--------------KDVNILTGDFKEYLP 157 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTT--------------CEEEEEESCGGGSHH
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCC--------------CcEEEEECcHHHhhh
Confidence 489999999999999999999876 9999999999999999999987 77 689999999988521
Q ss_pred ccccCCCcccEEEEecc
Q 006731 375 SMQIQPHSVDVLVSEWM 391 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~m 391 (633)
. ++..+||+|++++.
T Consensus 158 ~--~~~~~fDvV~lDPP 172 (410)
T 3ll7_A 158 L--IKTFHPDYIYVDPA 172 (410)
T ss_dssp H--HHHHCCSEEEECCE
T ss_pred h--ccCCCceEEEECCC
Confidence 0 12358999999863
No 268
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.62 E-value=1.3e-07 Score=109.27 Aligned_cols=122 Identities=17% Similarity=0.134 Sum_probs=88.8
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCC-------------------------------------------
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA------------------------------------------- 320 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa------------------------------------------- 320 (633)
....+|.......++..|||.+||+|.+.+.+|..++
T Consensus 177 ~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 177 TLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 3555666655566788999999999999998887531
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecc-cccccChh
Q 006731 321 SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWM-GYCLLYES 399 (633)
Q Consensus 321 ~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~m-g~~L~~e~ 399 (633)
.+|+|+|+++.|++.|+.++..+|+. +.|++.++|+.++... .+.++||+||+++. |.-+....
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~-------------~~i~~~~~D~~~~~~~--~~~~~~d~Iv~NPPYG~Rlg~~~ 321 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIG-------------ELITFEVKDVAQLTNP--LPKGPYGTVLSNPPYGERLDSEP 321 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCG-------------GGEEEEECCGGGCCCS--CTTCCCCEEEECCCCCC---CCH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCC-------------CceEEEECChhhCccc--cccCCCCEEEeCCCccccccchh
Confidence 37999999999999999999999997 7899999999987510 12238999999963 32233333
Q ss_pred hHHHHHHHHhhcc---cCCcEEEe
Q 006731 400 MLSSVLFARDQWL---KPGGAILP 420 (633)
Q Consensus 400 ~l~~vl~a~~r~L---kpgG~lip 420 (633)
.+..+...+.+.| .|||.+..
T Consensus 322 ~l~~ly~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 322 ALIALHSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHHHHHhhCCCCeEEE
Confidence 4555555554444 47988664
No 269
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.58 E-value=1e-07 Score=97.81 Aligned_cols=82 Identities=18% Similarity=0.142 Sum_probs=64.1
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCC---eEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEE
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAGAS---RVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~---~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~ 363 (633)
+.|.......++.+|||||||+|.++..+++.+.. +|+|||+++.|++.|+++. . .+++
T Consensus 32 ~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~-------------~~v~ 93 (279)
T 3uzu_A 32 DAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----G-------------ELLE 93 (279)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----G-------------GGEE
T ss_pred HHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----C-------------CCcE
Confidence 33444445678899999999999999999998652 2999999999999999883 2 7899
Q ss_pred EEEccccccccccccCCC------cccEEEEec
Q 006731 364 VVQGMVEELGESMQIQPH------SVDVLVSEW 390 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~------~~DvIvse~ 390 (633)
++++|+.+++ ++.- ....||+++
T Consensus 94 ~i~~D~~~~~----~~~~~~~~~~~~~~vv~Nl 122 (279)
T 3uzu_A 94 LHAGDALTFD----FGSIARPGDEPSLRIIGNL 122 (279)
T ss_dssp EEESCGGGCC----GGGGSCSSSSCCEEEEEEC
T ss_pred EEECChhcCC----hhHhcccccCCceEEEEcc
Confidence 9999999987 4321 245677775
No 270
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.54 E-value=9.7e-08 Score=96.46 Aligned_cols=83 Identities=19% Similarity=0.289 Sum_probs=65.4
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
+.+.|.......++.+|||||||+|.++..+++.|+.+|+|||+++.+++.++++ + . .++++
T Consensus 19 i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~----~-~-------------~~v~~ 80 (249)
T 3ftd_A 19 VLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI----G-D-------------ERLEV 80 (249)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS----C-C-------------TTEEE
T ss_pred HHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc----c-C-------------CCeEE
Confidence 4444555556678899999999999999999999867999999999999888764 1 2 67999
Q ss_pred EEccccccccccccCC--CcccEEEEec
Q 006731 365 VQGMVEELGESMQIQP--HSVDVLVSEW 390 (633)
Q Consensus 365 i~gd~e~l~~~~~l~~--~~~DvIvse~ 390 (633)
+++|+.+++ ++. ..+ +|++++
T Consensus 81 i~~D~~~~~----~~~~~~~~-~vv~Nl 103 (249)
T 3ftd_A 81 INEDASKFP----FCSLGKEL-KVVGNL 103 (249)
T ss_dssp ECSCTTTCC----GGGSCSSE-EEEEEC
T ss_pred EEcchhhCC----hhHccCCc-EEEEEC
Confidence 999999887 432 233 677664
No 271
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.53 E-value=6.4e-07 Score=87.36 Aligned_cols=102 Identities=16% Similarity=0.108 Sum_probs=76.0
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCC--CCCCCCCCCCCCCCCcEEEEEcccccc--
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDF--WWDRPQSEGNINNAGKMEVVQGMVEEL-- 372 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl--~~~~~~~~~~~~~~~~I~vi~gd~e~l-- 372 (633)
+.++||++|| |.-++.+|+....+|++||.++..++.|+++++.+|+ . ++|+++.+++.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~-------------~~I~~~~gda~~~~~ 94 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEG-------------TEVNIVWTDIGPTGD 94 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTT-------------CEEEEEECCCSSBCG
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCC-------------CceEEEEeCchhhhc
Confidence 4689999998 4788888886335999999999999999999999997 6 8999999997543
Q ss_pred -------------cccc----cc-CCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 373 -------------GESM----QI-QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 373 -------------~~~~----~l-~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+... .+ ..++||+|+...- . ....+....++|+|||+|+.+
T Consensus 95 wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~-------k-~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 95 WGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR-------F-RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp GGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSS-------S-HHHHHHHHHHHCSSCEEEEET
T ss_pred ccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCC-------C-chhHHHHHHHhcCCCeEEEEe
Confidence 1000 01 1368999996531 1 124445556899999999854
No 272
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.53 E-value=1.4e-07 Score=97.96 Aligned_cols=82 Identities=13% Similarity=0.193 Sum_probs=66.1
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aG-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
...++.+|||+|||+|.++..+++.. ..+|+|||.|+.|++.|+++++.++ .+++++++++.++
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g---------------~~v~~v~~d~~~l 87 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS---------------DRVSLFKVSYREA 87 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT---------------TTEEEEECCGGGH
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC---------------CcEEEEECCHHHH
Confidence 45678999999999999999999873 4599999999999999999987665 4799999999887
Q ss_pred cccc-ccCCCcccEEEEec
Q 006731 373 GESM-QIQPHSVDVLVSEW 390 (633)
Q Consensus 373 ~~~~-~l~~~~~DvIvse~ 390 (633)
+... .....+||.|++.+
T Consensus 88 ~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 88 DFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp HHHHHHTTCSCEEEEEEEC
T ss_pred HHHHHhcCCCCCCEEEEcC
Confidence 5210 01125799999864
No 273
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.51 E-value=6.7e-08 Score=97.79 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=60.7
Q ss_pred HHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCe--EEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQAGASR--VIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~--V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
.|.......++.+|||||||+|.++. +++ +. + |+|||+++.|++.|++++.. . ++++++
T Consensus 12 ~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~--~--------------~~v~~i 72 (252)
T 1qyr_A 12 SIVSAINPQKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFL--G--------------PKLTIY 72 (252)
T ss_dssp HHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTT--G--------------GGEEEE
T ss_pred HHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhcc--C--------------CceEEE
Confidence 34443355678899999999999999 765 43 6 99999999999888876542 1 579999
Q ss_pred EccccccccccccCC-----CcccEEEEec
Q 006731 366 QGMVEELGESMQIQP-----HSVDVLVSEW 390 (633)
Q Consensus 366 ~gd~e~l~~~~~l~~-----~~~DvIvse~ 390 (633)
++|+.+++ ++. +..|+||++.
T Consensus 73 ~~D~~~~~----~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 73 QQDAMTFN----FGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp CSCGGGCC----HHHHHHHHTSCEEEEEEC
T ss_pred ECchhhCC----HHHhhcccCCceEEEECC
Confidence 99999876 331 2357888875
No 274
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.49 E-value=2.1e-07 Score=98.57 Aligned_cols=98 Identities=14% Similarity=0.175 Sum_probs=74.7
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
.++.+|||||||+|.++..+++... .+++++|. +.+++.|++ + .+|+++.+|+.+ +
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~--------------~~v~~~~~d~~~-~- 248 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N--------------ENLNFVGGDMFK-S- 248 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C--------------SSEEEEECCTTT-C-
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C--------------CCcEEEeCccCC-C-
Confidence 3568999999999999999998843 48999999 677754432 2 459999999987 5
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccC---CcEEEeec
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKP---GGAILPDT 422 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~Lkp---gG~lip~~ 422 (633)
+| .||+|++..+-+.+ .......++..+.+.|+| ||.++...
T Consensus 249 ---~~--~~D~v~~~~vlh~~-~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 249 ---IP--SADAVLLKWVLHDW-NDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp ---CC--CCSEEEEESCGGGS-CHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred ---CC--CceEEEEcccccCC-CHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 55 49999987553332 222345899999999999 99988543
No 275
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.47 E-value=9e-08 Score=97.13 Aligned_cols=86 Identities=16% Similarity=0.168 Sum_probs=65.5
Q ss_pred HHhCCCCCCC--CEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhC-------C-CCCCCCCCCCCCCC
Q 006731 289 ILENPSLMKG--AVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDN-------D-FWWDRPQSEGNINN 358 (633)
Q Consensus 289 I~~~~~~~~~--~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~n-------g-l~~~~~~~~~~~~~ 358 (633)
+.+...+.++ .+|||+|||+|..++.+|+.|+ +|++||.++.+++.+++.++.. + +.
T Consensus 78 l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~------------ 144 (258)
T 2oyr_A 78 VAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQ------------ 144 (258)
T ss_dssp HHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHH------------
T ss_pred HHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhh------------
Confidence 3333344566 8999999999999999999988 7999999998877776665421 2 22
Q ss_pred CCcEEEEEccccccccccccCCCcccEEEEecc
Q 006731 359 AGKMEVVQGMVEELGESMQIQPHSVDVLVSEWM 391 (633)
Q Consensus 359 ~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~m 391 (633)
.+++++++|+.++... ++ .+||+|+..+|
T Consensus 145 -~~i~~~~~D~~~~L~~--~~-~~fDvV~lDP~ 173 (258)
T 2oyr_A 145 -ERLQLIHASSLTALTD--IT-PRPQVVYLDPM 173 (258)
T ss_dssp -HHEEEEESCHHHHSTT--CS-SCCSEEEECCC
T ss_pred -cCEEEEECCHHHHHHh--Cc-ccCCEEEEcCC
Confidence 5799999999886321 23 47999999876
No 276
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.36 E-value=5.2e-07 Score=101.05 Aligned_cols=110 Identities=15% Similarity=0.033 Sum_probs=80.2
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHc----C---------------CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCC
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQA----G---------------ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEG 354 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~a----G---------------a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~ 354 (633)
...++.+|||.|||||.+.+.+++. + ..+++|+|+++.+++.|+.++..+++.
T Consensus 166 ~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~-------- 237 (541)
T 2ar0_A 166 KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIE-------- 237 (541)
T ss_dssp CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCC--------
T ss_pred ccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCC--------
Confidence 3456789999999999988887764 1 137999999999999999999888874
Q ss_pred CCCCCC----cEEEEEccccccccccccCCCcccEEEEecc-cccccC----------hhhHHHHHHHHhhcccCCcEEE
Q 006731 355 NINNAG----KMEVVQGMVEELGESMQIQPHSVDVLVSEWM-GYCLLY----------ESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 355 ~~~~~~----~I~vi~gd~e~l~~~~~l~~~~~DvIvse~m-g~~L~~----------e~~l~~vl~a~~r~LkpgG~li 419 (633)
. .+.++++|....+. .+..+||+||+++. +..... ...-..++..+.++|+|||++.
T Consensus 238 -----~~~~~~~~I~~gDtL~~~~---~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a 309 (541)
T 2ar0_A 238 -----GNLDHGGAIRLGNTLGSDG---ENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAA 309 (541)
T ss_dssp -----CBGGGTBSEEESCTTSHHH---HTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEE
T ss_pred -----ccccccCCeEeCCCccccc---ccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEE
Confidence 2 27788998765431 23468999999863 111100 0112357888889999999876
No 277
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.34 E-value=8.3e-07 Score=91.34 Aligned_cols=115 Identities=17% Similarity=0.193 Sum_probs=85.5
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
...++||-||.|.|..+..+++. +..+|+.||+++.+++.|++.+..... ......+++++.+|...+..
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~---------~~~~dpRv~v~~~Dg~~~l~ 152 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA---------GSYDDPRFKLVIDDGVNFVN 152 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHT---------TGGGCTTEEEEESCTTTTTS
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccc---------cccCCCcEEEEechHHHHHh
Confidence 35689999999999999999987 567999999999999999998743110 01123789999999988753
Q ss_pred ccccCCCcccEEEEecccccccChh-hHHHHHHHHhhcccCCcEEEeec
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYES-MLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~-~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
...++||+||....+.....+. .-..++..+.+.|+|||+++-..
T Consensus 153 ---~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 153 ---QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ---CSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred ---hccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 3457899999875332111111 12458888999999999999543
No 278
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.20 E-value=2.7e-06 Score=90.29 Aligned_cols=119 Identities=13% Similarity=0.035 Sum_probs=83.3
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
++++||-||.|.|..+..+.+...++|+.||+++.+++.|++.+....- ...+....++++++.+|........
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~------~~~d~pr~~rv~vii~Da~~fl~~~ 278 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCG------DVLDNLKGDCYQVLIEDCIPVLKRY 278 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----------CCSSSEETTEEEEESCHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhh------hhhccccccceeeehHHHHHHHHhh
Confidence 5689999999999999999998778999999999999999987642110 0011222357999999987754211
Q ss_pred ccCCCcccEEEEeccccc------ccChh-hHHHHHHHHhhcccCCcEEEee
Q 006731 377 QIQPHSVDVLVSEWMGYC------LLYES-MLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 377 ~l~~~~~DvIvse~mg~~------L~~e~-~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.-..++||+||....... ..... -...++..+.+.|+|||+++-.
T Consensus 279 ~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 279 AKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp HHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 112468999998743211 11111 1356788899999999999844
No 279
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.17 E-value=1.4e-06 Score=88.14 Aligned_cols=108 Identities=17% Similarity=0.167 Sum_probs=70.4
Q ss_pred CCCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 293 PSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 293 ~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
..+.++.+|||||||+|.++..+++. ++..|+|+|++-.+.. .... ......++..++++++.
T Consensus 70 ~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~--------~pi~--------~~~~g~~ii~~~~~~dv 133 (277)
T 3evf_A 70 GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHE--------KPMN--------VQSLGWNIITFKDKTDI 133 (277)
T ss_dssp TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCC--------CCCC--------CCBTTGGGEEEECSCCT
T ss_pred CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcc--------cccc--------cCcCCCCeEEEecccee
Confidence 44567789999999999999998876 7778999998743210 0000 00001245556776654
Q ss_pred cccccccCCCcccEEEEecccccccChhh-H--HHHHHHHhhcccCC-cEEEe
Q 006731 372 LGESMQIQPHSVDVLVSEWMGYCLLYESM-L--SSVLFARDQWLKPG-GAILP 420 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~mg~~L~~e~~-l--~~vl~a~~r~Lkpg-G~lip 420 (633)
.. ++.++||+|+|..+.......-+ . ..++..+.++|+|| |.++.
T Consensus 134 ~~----l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~ 182 (277)
T 3evf_A 134 HR----LEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV 182 (277)
T ss_dssp TT----SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred hh----cCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 44 66789999999864331111111 1 12467788999999 99984
No 280
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.15 E-value=2.1e-06 Score=96.09 Aligned_cols=104 Identities=11% Similarity=-0.067 Sum_probs=74.7
Q ss_pred EEEEECCCcchHHHHHHHc--------C--------CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEE
Q 006731 300 VVMDIGCGTGILSLFAAQA--------G--------ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 300 ~VLDVGcGtG~lsl~~a~a--------G--------a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~ 363 (633)
+|||.+||||.+.+.+++. + ...++|+|+++.+++.|+.++..+|+. .++.
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~-------------~~i~ 313 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID-------------FNFG 313 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC-------------CBCC
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC-------------cccc
Confidence 9999999999887776542 1 237999999999999999999988886 5555
Q ss_pred EEEccccccccccccCCCcccEEEEecc-ccc------------------------ccChh-hHHHHHHHHhhcccCCcE
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWM-GYC------------------------LLYES-MLSSVLFARDQWLKPGGA 417 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~m-g~~------------------------L~~e~-~l~~vl~a~~r~LkpgG~ 417 (633)
++++|....+. .+..+||+||+++. +.. +.... .--.++..+.++|+|||+
T Consensus 314 i~~gDtL~~~~---~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 390 (544)
T 3khk_A 314 KKNADSFLDDQ---HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGS 390 (544)
T ss_dssp SSSCCTTTSCS---CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEE
T ss_pred eeccchhcCcc---cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCce
Confidence 57777654431 34578999999853 210 00000 011478888999999998
Q ss_pred EE
Q 006731 418 IL 419 (633)
Q Consensus 418 li 419 (633)
+.
T Consensus 391 ~a 392 (544)
T 3khk_A 391 MA 392 (544)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 281
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.14 E-value=5.7e-06 Score=87.70 Aligned_cols=122 Identities=20% Similarity=0.192 Sum_probs=90.9
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
...+|.+|||+.||+|.=+..++..+. ..|+|+|+++.-+...+++++..+.. .-....++.+...|...+
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~--------~~~~~~~v~v~~~D~~~~ 216 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPE--------EIRDGNQVRVTSWDGRKW 216 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCT--------TTTTSSSEEEECCCGGGH
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhh--------hhccCCceEEEeCchhhc
Confidence 467899999999999999999988864 47999999999999999999876652 001125788999998876
Q ss_pred ccccccCCCcccEEEEeccccc----ccC----------hhh-------HHHHHHHHhhcccCCcEEEeecceeE
Q 006731 373 GESMQIQPHSVDVLVSEWMGYC----LLY----------ESM-------LSSVLFARDQWLKPGGAILPDTATMF 426 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~~----L~~----------e~~-------l~~vl~a~~r~LkpgG~lip~~~t~~ 426 (633)
.. ...++||.|+.....+. ... ... -..+|.+..++|||||+|+-++|++.
T Consensus 217 ~~---~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 217 GE---LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp HH---HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred ch---hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 52 34578999998643211 110 111 13578888899999999999999974
No 282
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.11 E-value=1.4e-05 Score=89.33 Aligned_cols=109 Identities=16% Similarity=0.052 Sum_probs=81.1
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc----CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA----GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a----Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e 370 (633)
..++.+|||.+||||.+.+.+++. +...++|+|+++.++..|+.++..+|+.. .++.++++|..
T Consensus 219 ~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~------------~~~~I~~gDtL 286 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI------------ENQFLHNADTL 286 (542)
T ss_dssp TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG------------GGEEEEESCTT
T ss_pred CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc------------CccceEeccee
Confidence 356789999999999888877775 34589999999999999999998888741 36889999987
Q ss_pred cc--ccccccCCCcccEEEEecccccccC--h------------------hh-HHHHHHHHhhccc-CCcEEE
Q 006731 371 EL--GESMQIQPHSVDVLVSEWMGYCLLY--E------------------SM-LSSVLFARDQWLK-PGGAIL 419 (633)
Q Consensus 371 ~l--~~~~~l~~~~~DvIvse~mg~~L~~--e------------------~~-l~~vl~a~~r~Lk-pgG~li 419 (633)
.. +. .+..+||+||+++. |...+ . +. --.++..+.++|+ |||++.
T Consensus 287 ~~d~p~---~~~~~fD~IvaNPP-f~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 287 DEDWPT---QEPTNFDGVLMNPP-YSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp TSCSCC---SSCCCBSEEEECCC-TTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEE
T ss_pred cccccc---cccccccEEEecCC-cCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEE
Confidence 65 21 23578999999852 11111 0 00 1137788889999 999875
No 283
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.06 E-value=4.4e-06 Score=84.67 Aligned_cols=119 Identities=20% Similarity=0.146 Sum_probs=72.7
Q ss_pred CCCCEEEEECCCcchHHHHHHHc-------CC------CeEEEEeCCH---HHH-----------HHHHHHHHhCCCCCC
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA-------GA------SRVIAVEASE---KMA-----------AVATQIAKDNDFWWD 348 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a-------Ga------~~V~aVD~S~---~~~-----------~~A~~~~~~ngl~~~ 348 (633)
.++.+|||||+|+|..++.++++ +. .+|+++|..+ ..+ ..|+++++.....
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~-- 136 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMP-- 136 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCS--
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccc--
Confidence 35579999999999877776553 22 3899999876 333 3556665531100
Q ss_pred CCCC--CCCCCCCCcEEEEEccccccccccccCC---CcccEEEEecccccccChhh-HHHHHHHHhhcccCCcEEE
Q 006731 349 RPQS--EGNINNAGKMEVVQGMVEELGESMQIQP---HSVDVLVSEWMGYCLLYESM-LSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 349 ~~~~--~~~~~~~~~I~vi~gd~e~l~~~~~l~~---~~~DvIvse~mg~~L~~e~~-l~~vl~a~~r~LkpgG~li 419 (633)
.+.. ........+++++.||+.+.... ++. .+||+|+...+.-.- +..+ -..++..+.+.|+|||+++
T Consensus 137 ~~g~~r~~~~~~~~~l~l~~GDa~~~l~~--~~~~~~~~~D~iflD~fsp~~-~p~lw~~~~l~~l~~~L~pGG~l~ 210 (257)
T 2qy6_A 137 LPGCHRLLLDEGRVTLDLWFGDINELISQ--LDDSLNQKVDAWFLDGFAPAK-NPDMWTQNLFNAMARLARPGGTLA 210 (257)
T ss_dssp CSEEEEEEEC--CEEEEEEESCHHHHGGG--SCGGGTTCEEEEEECSSCTTT-CGGGCCHHHHHHHHHHEEEEEEEE
T ss_pred ccchhheeccCCceEEEEEECcHHHHHhh--cccccCCeEEEEEECCCCccc-ChhhcCHHHHHHHHHHcCCCcEEE
Confidence 0000 00011125788999999885311 222 279999976432111 1222 3568999999999999998
No 284
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.04 E-value=2e-06 Score=87.16 Aligned_cols=107 Identities=18% Similarity=0.213 Sum_probs=68.2
Q ss_pred CCCCCCEEEEECCCcchHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQ-AGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~-aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.+.++.+|||||||+|.++..+++ .|+..|+|+|++..+...+... . ....++..+..++...
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~---------------~~g~~ii~~~~~~dv~ 150 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-T---------------TLGWNLIRFKDKTDVF 150 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-C---------------BTTGGGEEEECSCCGG
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-c---------------cCCCceEEeeCCcchh
Confidence 466788999999999999999885 4788899999986532111100 0 0113344445443333
Q ss_pred ccccccCCCcccEEEEecccccccChhh---HHHHHHHHhhcccCC--cEEEe
Q 006731 373 GESMQIQPHSVDVLVSEWMGYCLLYESM---LSSVLFARDQWLKPG--GAILP 420 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~~L~~e~~---l~~vl~a~~r~Lkpg--G~lip 420 (633)
. ++..++|+|+|..........-+ ...++.-+.++|+|| |.++.
T Consensus 151 ~----l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~ 199 (282)
T 3gcz_A 151 N----MEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCI 199 (282)
T ss_dssp G----SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred h----cCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 3 55789999999864331111111 113477778999999 99884
No 285
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.01 E-value=1.7e-05 Score=81.36 Aligned_cols=107 Identities=13% Similarity=0.108 Sum_probs=80.3
Q ss_pred CCCCEEEEECCCcchHHHHHHHc----C--CCeEEEEeCCH--------------------------HHHHHHHHHHHhC
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQA----G--ASRVIAVEASE--------------------------KMAAVATQIAKDN 343 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~a----G--a~~V~aVD~S~--------------------------~~~~~A~~~~~~n 343 (633)
...+.||++|+..|..++.++.+ | .++|+++|..+ ..++.+++++++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 45679999999999988887654 2 46899999642 1356789999988
Q ss_pred CC-CCCCCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 344 DF-WWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 344 gl-~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
|+ . ++|+++.|++.+.... ++.++||+|.... - .++ .....+..+...|+|||+|+.+.
T Consensus 185 gl~~-------------~~I~li~Gda~etL~~--~~~~~~d~vfIDa---D-~y~-~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 185 DLLD-------------EQVRFLPGWFKDTLPT--APIDTLAVLRMDG---D-LYE-STWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp TCCS-------------TTEEEEESCHHHHSTT--CCCCCEEEEEECC---C-SHH-HHHHHHHHHGGGEEEEEEEEESS
T ss_pred CCCc-------------CceEEEEeCHHHHHhh--CCCCCEEEEEEcC---C-ccc-cHHHHHHHHHhhcCCCEEEEEcC
Confidence 87 4 7899999999875422 4457899999643 1 222 23467888999999999999765
No 286
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.00 E-value=9.3e-06 Score=85.80 Aligned_cols=88 Identities=17% Similarity=0.210 Sum_probs=65.5
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
+.+|.+|||+||++|..+..+++.|+ +|+|||..+..- .+... ++|+++++|...+.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~~-----~l~~~----------------~~V~~~~~d~~~~~- 265 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMAQ-----SLMDT----------------GQVTWLREDGFKFR- 265 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCCH-----HHHTT----------------TCEEEECSCTTTCC-
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcCh-----hhccC----------------CCeEEEeCcccccc-
Confidence 46799999999999999999999987 999999875221 11211 67999999998887
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCC
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG 415 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~Lkpg 415 (633)
.+..+||+|||.+..+ +..++..+.++|..+
T Consensus 266 ---~~~~~~D~vvsDm~~~-------p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 266 ---PTRSNISWMVCDMVEK-------PAKVAALMAQWLVNG 296 (375)
T ss_dssp ---CCSSCEEEEEECCSSC-------HHHHHHHHHHHHHTT
T ss_pred ---CCCCCcCEEEEcCCCC-------hHHhHHHHHHHHhcc
Confidence 5557899999976421 234445555666555
No 287
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.00 E-value=6.6e-06 Score=80.91 Aligned_cols=104 Identities=19% Similarity=0.232 Sum_probs=71.4
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc-cccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG-MVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g-d~e~ 371 (633)
.+.++.+|||+||++|.++..++.. |+++|+|+|+-..-.. --..+...|+ +.|+|+++ |+..
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe-~P~~~~s~gw--------------n~v~fk~gvDv~~ 139 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHE-EPVPMSTYGW--------------NIVKLMSGKDVFY 139 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSC-CCCCCCCTTT--------------TSEEEECSCCGGG
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCcc-CcchhhhcCc--------------CceEEEeccceee
Confidence 5678899999999999999987776 8889999998754220 0011223454 78999999 9876
Q ss_pred cccccccCCCcccEEEEecccccccChhh---HHHHHHHHhhcccCCcEEE
Q 006731 372 LGESMQIQPHSVDVLVSEWMGYCLLYESM---LSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~mg~~L~~e~~---l~~vl~a~~r~LkpgG~li 419 (633)
++ +.++|+|+|.+-...-..+-. --.+|.-+.+||++ |.++
T Consensus 140 ~~------~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc 183 (267)
T 3p8z_A 140 LP------PEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFC 183 (267)
T ss_dssp CC------CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEE
T ss_pred cC------CccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEE
Confidence 65 478999999753222211111 12377777899998 5444
No 288
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.93 E-value=1.9e-05 Score=90.67 Aligned_cols=111 Identities=14% Similarity=0.042 Sum_probs=73.9
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcC----CCeEEEEeCCHHHHHHH--HHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAG----ASRVIAVEASEKMAAVA--TQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aG----a~~V~aVD~S~~~~~~A--~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
..++.+|||.|||+|.+.+.+++.. ..+++|+|+++.+++.| +.++..|++.+. -....+...+
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhG----------i~~~~I~~dD 388 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSS----------NNAPTITGED 388 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBT----------TBCCEEECCC
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcC----------CCcceEEecc
Confidence 3467899999999999999988863 24799999999999999 555554433200 0123445555
Q ss_pred ccccccccccCCCcccEEEEecccccc--cChh-------------------------hHHHHHHHHhhcccCCcEEE
Q 006731 369 VEELGESMQIQPHSVDVLVSEWMGYCL--LYES-------------------------MLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 369 ~e~l~~~~~l~~~~~DvIvse~mg~~L--~~e~-------------------------~l~~vl~a~~r~LkpgG~li 419 (633)
...... .+..+||+||+++. |.. .... ....++..+.++|+|||++.
T Consensus 389 ~L~~~~---~~~~kFDVVIgNPP-Yg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLA 462 (878)
T 3s1s_A 389 VCSLNP---EDFANVSVVVMNPP-YVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVIS 462 (878)
T ss_dssp GGGCCG---GGGTTEEEEEECCB-CCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEE
T ss_pred hhcccc---cccCCCCEEEECCC-ccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEE
Confidence 554321 23468999999963 321 1110 12346777889999999977
No 289
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.78 E-value=4.4e-05 Score=77.47 Aligned_cols=106 Identities=19% Similarity=0.199 Sum_probs=70.2
Q ss_pred CCCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc-ccc
Q 006731 293 PSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG-MVE 370 (633)
Q Consensus 293 ~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g-d~e 370 (633)
..+.++.+||||||++|.++..++.. |+++|+|+|+-..-... -..+...++ .-|+++.+ |+.
T Consensus 90 ~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~-P~~~~ql~w--------------~lV~~~~~~Dv~ 154 (321)
T 3lkz_A 90 RFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE-PQLVQSYGW--------------NIVTMKSGVDVF 154 (321)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC-CCCCCBTTG--------------GGEEEECSCCTT
T ss_pred cCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC-cchhhhcCC--------------cceEEEeccCHh
Confidence 45678889999999999999977766 88899999987541100 000012222 45888888 887
Q ss_pred ccccccccCCCcccEEEEecccccccChhh---HHHHHHHHhhcccCC-cEEE
Q 006731 371 ELGESMQIQPHSVDVLVSEWMGYCLLYESM---LSSVLFARDQWLKPG-GAIL 419 (633)
Q Consensus 371 ~l~~~~~l~~~~~DvIvse~mg~~L~~e~~---l~~vl~a~~r~Lkpg-G~li 419 (633)
.++ +.++|+|+|..--.....+-. --.+|.-+.+||++| |.++
T Consensus 155 ~l~------~~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~ 201 (321)
T 3lkz_A 155 YRP------SECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFC 201 (321)
T ss_dssp SSC------CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred hCC------CCCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEE
Confidence 776 377999999743222111111 123677778999988 6655
No 290
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.74 E-value=1.5e-05 Score=81.24 Aligned_cols=106 Identities=15% Similarity=0.103 Sum_probs=66.3
Q ss_pred CCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
+.++++||||||++|.++..+++. |+..|+|+|+...+.. ... .....+.++..+...+.-..
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~--------~P~--------~~~~~~~~iv~~~~~~di~~ 142 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHE--------KPI--------HMQTLGWNIVKFKDKSNVFT 142 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSC--------CCC--------CCCBTTGGGEEEECSCCTTT
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccc--------ccc--------cccccCCceEEeecCceeee
Confidence 567899999999999999999975 7788999999753210 000 00000123333343333222
Q ss_pred cccccCCCcccEEEEecccccccChhh---HHHHHHHHhhcccCC-cEEEe
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESM---LSSVLFARDQWLKPG-GAILP 420 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~---l~~vl~a~~r~Lkpg-G~lip 420 (633)
++++++|+|+|..........-+ ...++.-+.++|+|| |.++.
T Consensus 143 ----l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~ 189 (300)
T 3eld_A 143 ----MPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCV 189 (300)
T ss_dssp ----SCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEE
T ss_pred ----cCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 45689999999854431111111 123477778999999 99884
No 291
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.73 E-value=5.3e-05 Score=77.12 Aligned_cols=78 Identities=22% Similarity=0.260 Sum_probs=62.8
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.+.++.++||.+||.|..|..+++.+. +|+|+|.++.+++.|++ +.. +++++++++..++.
T Consensus 19 ~~~~gg~~VD~T~G~GGHS~~il~~~g-~VigiD~Dp~Ai~~A~~-L~~-----------------~rv~lv~~~f~~l~ 79 (285)
T 1wg8_A 19 AVRPGGVYVDATLGGAGHARGILERGG-RVIGLDQDPEAVARAKG-LHL-----------------PGLTVVQGNFRHLK 79 (285)
T ss_dssp TCCTTCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHH-TCC-----------------TTEEEEESCGGGHH
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHCCC-EEEEEeCCHHHHHHHHh-hcc-----------------CCEEEEECCcchHH
Confidence 456789999999999999999999844 99999999999988887 532 47999999999885
Q ss_pred ccc-ccCCCcccEEEEec
Q 006731 374 ESM-QIQPHSVDVLVSEW 390 (633)
Q Consensus 374 ~~~-~l~~~~~DvIvse~ 390 (633)
... ....++||.|+..+
T Consensus 80 ~~L~~~g~~~vDgIL~DL 97 (285)
T 1wg8_A 80 RHLAALGVERVDGILADL 97 (285)
T ss_dssp HHHHHTTCSCEEEEEEEC
T ss_pred HHHHHcCCCCcCEEEeCC
Confidence 321 12235799999763
No 292
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.59 E-value=0.00046 Score=73.46 Aligned_cols=120 Identities=17% Similarity=0.086 Sum_probs=64.8
Q ss_pred CCEEEEECCCcchHHHHHHHc------------C----CCeEEEEeCCHHHHHHHHHHHHhCCCCCCC-CCCCCCCCCCC
Q 006731 298 GAVVMDIGCGTGILSLFAAQA------------G----ASRVIAVEASEKMAAVATQIAKDNDFWWDR-PQSEGNINNAG 360 (633)
Q Consensus 298 ~~~VLDVGcGtG~lsl~~a~a------------G----a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~-~~~~~~~~~~~ 360 (633)
..+|+|+|||+|..++.++.. | --+|+..|...+.....=+.+....-..+. ..........-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 578999999999998887432 1 125666665544332211111110000000 00000000011
Q ss_pred cEEEEEccccccccccccCCCcccEEEEecccccccC-----------------------------------hhhHHHHH
Q 006731 361 KMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLY-----------------------------------ESMLSSVL 405 (633)
Q Consensus 361 ~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~-----------------------------------e~~l~~vl 405 (633)
-+.-+.|....-. +|.+++|+|+|...-+.+.. ..++..+|
T Consensus 133 f~~gvpgSFy~rl----fP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL 208 (374)
T 3b5i_A 133 FVAGVPGSFYRRL----FPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFL 208 (374)
T ss_dssp EEEEEESCTTSCC----SCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhccc----CCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1223333333333 78899999999754333321 12567789
Q ss_pred HHHhhcccCCcEEEee
Q 006731 406 FARDQWLKPGGAILPD 421 (633)
Q Consensus 406 ~a~~r~LkpgG~lip~ 421 (633)
..+.+.|+|||+++..
T Consensus 209 ~~ra~eL~pGG~mvl~ 224 (374)
T 3b5i_A 209 RARAAEVKRGGAMFLV 224 (374)
T ss_dssp HHHHHHEEEEEEEEEE
T ss_pred HHHHHHhCCCCEEEEE
Confidence 9999999999999954
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.53 E-value=6.5e-05 Score=75.03 Aligned_cols=104 Identities=19% Similarity=0.180 Sum_probs=61.5
Q ss_pred CCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc-cccc
Q 006731 294 SLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG-MVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g-d~e~ 371 (633)
-+.++.+|||+||++|..|..+++. +...|.|..+.... ....+. +....-.-++++++ |+.+
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~--------~~~P~~-------~~~~Gv~~i~~~~G~Df~~ 134 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG--------HEEPML-------MQSYGWNIVTMKSGVDVFY 134 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT--------SCCCCC-------CCSTTGGGEEEECSCCGGG
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc--------ccCCCc-------ccCCCceEEEeeccCCccC
Confidence 4567899999999999999999986 33233443332210 000110 00000023566667 9987
Q ss_pred cccccccCCCcccEEEEecccccccChh----hHHHHHHHHhhcccCCc-EEE
Q 006731 372 LGESMQIQPHSVDVLVSEWMGYCLLYES----MLSSVLFARDQWLKPGG-AIL 419 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~mg~~L~~e~----~l~~vl~a~~r~LkpgG-~li 419 (633)
+. +.++|+|+|..........- .+. +++-+.++|+||| .++
T Consensus 135 ~~------~~~~DvVLSDMAPnSG~~~vD~~Rs~~-aL~~A~~~Lk~gG~~Fv 180 (269)
T 2px2_A 135 KP------SEISDTLLCDIGESSPSAEIEEQRTLR-ILEMVSDWLSRGPKEFC 180 (269)
T ss_dssp SC------CCCCSEEEECCCCCCSCHHHHHHHHHH-HHHHHHHHHTTCCSEEE
T ss_pred CC------CCCCCEEEeCCCCCCCccHHHHHHHHH-HHHHHHHHhhcCCcEEE
Confidence 54 46899999986433111111 122 5666778999999 776
No 294
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.53 E-value=0.00011 Score=67.31 Aligned_cols=69 Identities=13% Similarity=0.244 Sum_probs=51.5
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcc-hHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTG-ILSLFAAQ-AGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG-~lsl~~a~-aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~ 361 (633)
...+.|.+.. .++.+|||||||+| ..+..+++ .|. .|+|+|+++.++ .
T Consensus 24 ~LaeYI~~~~--~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av--------------------------~- 73 (153)
T 2k4m_A 24 DLAVYIIRCS--GPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHG--------------------------G- 73 (153)
T ss_dssp HHHHHHHHHS--CSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSST--------------------------T-
T ss_pred HHHHHHHhcC--CCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCcccc--------------------------c-
Confidence 4555555542 35679999999999 59999997 787 899999999765 2
Q ss_pred EEEEEccccccccccccC-CCcccEEEE
Q 006731 362 MEVVQGMVEELGESMQIQ-PHSVDVLVS 388 (633)
Q Consensus 362 I~vi~gd~e~l~~~~~l~-~~~~DvIvs 388 (633)
+++.|+.+.. +. -+.||+|.+
T Consensus 74 --~v~dDiF~P~----~~~Y~~~DLIYs 95 (153)
T 2k4m_A 74 --IVRDDITSPR----MEIYRGAALIYS 95 (153)
T ss_dssp --EECCCSSSCC----HHHHTTEEEEEE
T ss_pred --eEEccCCCCc----ccccCCcCEEEE
Confidence 5777877643 21 148999987
No 295
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.45 E-value=0.00021 Score=73.64 Aligned_cols=47 Identities=32% Similarity=0.375 Sum_probs=43.6
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhC
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDN 343 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~n 343 (633)
.+|.+|||++||+|.+++.+++.|. +++|||+++.+++.|++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999987 9999999999999999998753
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.33 E-value=0.00063 Score=75.82 Aligned_cols=91 Identities=16% Similarity=0.054 Sum_probs=63.7
Q ss_pred HHHHhCCCCCCCCEEEEECCCcchHHHHHHHc----C----------CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCC
Q 006731 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQA----G----------ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQS 352 (633)
Q Consensus 287 ~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a----G----------a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~ 352 (633)
+.|.+.....++.+|+|-.||||.+.+.+.+. + ...++|+|+++.++..|+.++.-+|..
T Consensus 207 ~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~------ 280 (530)
T 3ufb_A 207 RFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE------ 280 (530)
T ss_dssp HHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS------
T ss_pred HHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc------
Confidence 33444445567889999999999887776653 1 136999999999999999988877773
Q ss_pred CCCCCCCCcEEEEEccccccccccccCCCcccEEEEecc
Q 006731 353 EGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWM 391 (633)
Q Consensus 353 ~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~m 391 (633)
...+.++|....+.....+..+||+||+++.
T Consensus 281 --------~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPP 311 (530)
T 3ufb_A 281 --------YPRIDPENSLRFPLREMGDKDRVDVILTNPP 311 (530)
T ss_dssp --------CCEEECSCTTCSCGGGCCGGGCBSEEEECCC
T ss_pred --------cccccccccccCchhhhcccccceEEEecCC
Confidence 3455677765433111122458999999963
No 297
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.25 E-value=0.00066 Score=72.38 Aligned_cols=107 Identities=16% Similarity=0.093 Sum_probs=66.1
Q ss_pred CCEEEEECCCcchHHHHHHHc--------------C----CCeEEEEeCC-----------HHHHHHHHHHHHhCCCCCC
Q 006731 298 GAVVMDIGCGTGILSLFAAQA--------------G----ASRVIAVEAS-----------EKMAAVATQIAKDNDFWWD 348 (633)
Q Consensus 298 ~~~VLDVGcGtG~lsl~~a~a--------------G----a~~V~aVD~S-----------~~~~~~A~~~~~~ngl~~~ 348 (633)
..+|+|+|||+|..++.+... + --+|+..|.. +.+.+.++ +.+|-.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~---~~~g~~-- 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLE---KENGRK-- 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHH---HHTCCC--
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhh---hhccCC--
Confidence 578999999999988887765 1 1267888876 44433222 122211
Q ss_pred CCCCCCCCCCCCcEEEEEccccccccccccCCCcccEEEEecccccccC-------------------------------
Q 006731 349 RPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLY------------------------------- 397 (633)
Q Consensus 349 ~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~------------------------------- 397 (633)
.+-.|+.|....+= ...+|.+++|+|+|...-+.+..
T Consensus 128 -----------~~~~f~~gvpgSFy-~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~a 195 (384)
T 2efj_A 128 -----------IGSCLIGAMPGSFY-SRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKA 195 (384)
T ss_dssp -----------TTSEEEEECCSCTT-SCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHH
T ss_pred -----------CCceEEEecchhhh-hccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHH
Confidence 12345555433321 11278899999999753333221
Q ss_pred -----hhhHHHHHHHHhhcccCCcEEEee
Q 006731 398 -----ESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 398 -----e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
..++..+|..+.+.|+|||+++..
T Consensus 196 y~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~ 224 (384)
T 2efj_A 196 YLDQFTKDFTTFLRIHSEELISRGRMLLT 224 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeEEEE
Confidence 122345699999999999999943
No 298
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.08 E-value=0.00038 Score=73.64 Aligned_cols=108 Identities=16% Similarity=0.208 Sum_probs=68.4
Q ss_pred CCCEEEEECCCcchHHHHHHHc------------CC-----CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 006731 297 KGAVVMDIGCGTGILSLFAAQA------------GA-----SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNA 359 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~a------------Ga-----~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~ 359 (633)
+.-+|+|+||++|..++.+... |. -+|+..|...+....+-+.+.... . .
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~-~------------~ 117 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN-D------------V 117 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC-S------------C
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc-c------------c
Confidence 3468999999999776655443 21 378888887776654444332110 0 0
Q ss_pred CcEEEEEc---cccccccccccCCCcccEEEEeccccccc------------------------------ChhhHHHHHH
Q 006731 360 GKMEVVQG---MVEELGESMQIQPHSVDVLVSEWMGYCLL------------------------------YESMLSSVLF 406 (633)
Q Consensus 360 ~~I~vi~g---d~e~l~~~~~l~~~~~DvIvse~mg~~L~------------------------------~e~~l~~vl~ 406 (633)
.+..|+.| ....-. +|.+++|+|+|...-+.+. +..++..+|.
T Consensus 118 ~~~~f~~gvpgSFy~rl----fp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~ 193 (359)
T 1m6e_X 118 DGVCFINGVPGSFYGRL----FPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLR 193 (359)
T ss_dssp TTCEEEEEEESCSSSCC----SCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEecchhhhhcc----CCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 02234444 333334 7889999999974322221 1335677899
Q ss_pred HHhhcccCCcEEEee
Q 006731 407 ARDQWLKPGGAILPD 421 (633)
Q Consensus 407 a~~r~LkpgG~lip~ 421 (633)
.+.+-|+|||+++..
T Consensus 194 ~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 194 CRAQEVVPGGRMVLT 208 (359)
T ss_dssp HHHHHBCTTCEEEEE
T ss_pred HHHHHhcCCceEEEE
Confidence 999999999999944
No 299
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.01 E-value=0.0018 Score=65.66 Aligned_cols=105 Identities=14% Similarity=0.146 Sum_probs=69.0
Q ss_pred hhHHHHHHHHh-CCCCCCCCEEEEECCC------cchHHHHHHHcCCC--eEEEEeCCHHHHHHHHHHHHhCCCCCCCCC
Q 006731 281 RTDSYRQAILE-NPSLMKGAVVMDIGCG------TGILSLFAAQAGAS--RVIAVEASEKMAAVATQIAKDNDFWWDRPQ 351 (633)
Q Consensus 281 R~~~y~~aI~~-~~~~~~~~~VLDVGcG------tG~lsl~~a~aGa~--~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~ 351 (633)
.+...-+.|.. ......|.+|||+||| +|. ..+.+.+.. .|+++|+.+... .
T Consensus 92 kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s-----------d------ 152 (344)
T 3r24_A 92 KYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS-----------D------ 152 (344)
T ss_dssp HHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC-----------S------
T ss_pred HHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc-----------C------
Confidence 33344444422 3456778999999983 344 344445443 899999987431 1
Q ss_pred CCCCCCCCCcEEEEEccccccccccccCCCcccEEEEec----ccccccC-----hhhHHHHHHHHhhcccCCcEEE
Q 006731 352 SEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEW----MGYCLLY-----ESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 352 ~~~~~~~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~----mg~~L~~-----e~~l~~vl~a~~r~LkpgG~li 419 (633)
.. .+++||...+. . ..+||+|+|.. .|. ... ......++.-+.+.|+|||.++
T Consensus 153 --------a~-~~IqGD~~~~~----~-~~k~DLVISDMAPNtTG~-~D~d~~Rs~~L~ElALdfA~~~LkpGGsFv 214 (344)
T 3r24_A 153 --------AD-STLIGDCATVH----T-ANKWDLIISDMYDPRTKH-VTKENDSKEGFFTYLCGFIKQKLALGGSIA 214 (344)
T ss_dssp --------SS-EEEESCGGGEE----E-SSCEEEEEECCCCTTSCS-SCSCCCCCCTHHHHHHHHHHHHEEEEEEEE
T ss_pred --------CC-eEEEccccccc----c-CCCCCEEEecCCCCcCCc-cccchhHHHHHHHHHHHHHHHhCcCCCEEE
Confidence 12 44999987765 3 48899999974 233 111 2245677888889999999998
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.91 E-value=0.0013 Score=66.30 Aligned_cols=49 Identities=16% Similarity=0.271 Sum_probs=43.7
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCC
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDF 345 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl 345 (633)
.+|.+|||..||+|..+..+++.|. +++|+|+++.+++.|+++++.+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhccC
Confidence 6789999999999999999999986 999999999999999999987764
No 301
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.86 E-value=0.00056 Score=69.61 Aligned_cols=112 Identities=10% Similarity=0.019 Sum_probs=78.6
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEE
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~ 363 (633)
.|.+.|.. +.+..|||+-+|||.+++.+.+ ++.+++.||.++..++..+++++. . .+++
T Consensus 82 ~yf~~l~~----~n~~~~LDlfaGSGaLgiEaLS-~~d~~vfvE~~~~a~~~L~~Nl~~---~-------------~~~~ 140 (283)
T 2oo3_A 82 EYISVIKQ----INLNSTLSYYPGSPYFAINQLR-SQDRLYLCELHPTEYNFLLKLPHF---N-------------KKVY 140 (283)
T ss_dssp HHHHHHHH----HSSSSSCCEEECHHHHHHHHSC-TTSEEEEECCSHHHHHHHTTSCCT---T-------------SCEE
T ss_pred HHHHHHHH----hcCCCceeEeCCcHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHhCc---C-------------CcEE
Confidence 45566654 3456799999999999999999 457999999999988776666543 2 6799
Q ss_pred EEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhh--cccCCcEEE
Q 006731 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQ--WLKPGGAIL 419 (633)
Q Consensus 364 vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r--~LkpgG~li 419 (633)
++++|.........-+..+||+|+..+. |.. ......++..+.+ .+.|+|+++
T Consensus 141 V~~~D~~~~L~~l~~~~~~fdLVfiDPP-Ye~--k~~~~~vl~~L~~~~~r~~~Gi~v 195 (283)
T 2oo3_A 141 VNHTDGVSKLNALLPPPEKRGLIFIDPS-YER--KEEYKEIPYAIKNAYSKFSTGLYC 195 (283)
T ss_dssp EECSCHHHHHHHHCSCTTSCEEEEECCC-CCS--TTHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEeCcHHHHHHHhcCCCCCccEEEECCC-CCC--CcHHHHHHHHHHHhCccCCCeEEE
Confidence 9999976532211123457999998763 221 1355666655544 567899887
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.82 E-value=0.0015 Score=68.85 Aligned_cols=82 Identities=9% Similarity=0.014 Sum_probs=59.1
Q ss_pred hhcChhhhHHHHHHHHhCC--CCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCC
Q 006731 275 MISDKVRTDSYRQAILENP--SLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQ 351 (633)
Q Consensus 275 mL~D~~R~~~y~~aI~~~~--~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~ 351 (633)
.|.|+.-.+...+++.-.. ...++..|||||.|.|.|+..+++. .+++|++||+++.++...++.. . .
T Consensus 34 FL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--~------ 104 (353)
T 1i4w_A 34 YLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--G------ 104 (353)
T ss_dssp CBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--T------
T ss_pred ccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--C------
Confidence 4556554444444442100 0014689999999999999999986 4579999999999998877765 2 2
Q ss_pred CCCCCCCCCcEEEEEccccccc
Q 006731 352 SEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 352 ~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
++++++++|+.++.
T Consensus 105 --------~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 105 --------SPLQILKRDPYDWS 118 (353)
T ss_dssp --------SSCEEECSCTTCHH
T ss_pred --------CCEEEEECCccchh
Confidence 68999999997654
No 303
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.64 E-value=0.0087 Score=63.16 Aligned_cols=103 Identities=22% Similarity=0.283 Sum_probs=66.3
Q ss_pred HHhCCCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEE
Q 006731 289 ILENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~ 366 (633)
+.+...+.+|.+||.+|+|. |.++..+|++ |+++|++++.++..++.|++. |. + .++.
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga--------------~--~vi~ 241 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GA--------------T--HVIN 241 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TC--------------S--EEEE
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CC--------------C--EEec
Confidence 33444677899999999987 8888888886 887899999999887777643 33 2 1222
Q ss_pred ccccccccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 367 GMVEELGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 367 gd~e~l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
..-.++... ..+..+.+|+|+-. .|. ...+....+.|+|+|+++.
T Consensus 242 ~~~~~~~~~~~~~~~gg~D~vid~-~g~--------~~~~~~~~~~l~~~G~iv~ 287 (371)
T 1f8f_A 242 SKTQDPVAAIKEITDGGVNFALES-TGS--------PEILKQGVDALGILGKIAV 287 (371)
T ss_dssp TTTSCHHHHHHHHTTSCEEEEEEC-SCC--------HHHHHHHHHTEEEEEEEEE
T ss_pred CCccCHHHHHHHhcCCCCcEEEEC-CCC--------HHHHHHHHHHHhcCCEEEE
Confidence 221111100 00122379999842 221 2345666789999999873
No 304
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.41 E-value=0.005 Score=64.05 Aligned_cols=82 Identities=18% Similarity=0.259 Sum_probs=62.2
Q ss_pred hCCCCCCCCEEEEECCCcchHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 291 ENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 291 ~~~~~~~~~~VLDVGcGtG~lsl~~a~a-G-a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
..+.+.+|.+++|..||.|..+.++++. | ..+|+|+|.++.+++.|+ ++ .. +++++++++
T Consensus 51 ~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~-------------~Rv~lv~~n 112 (347)
T 3tka_A 51 NGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DD-------------PRFSIIHGP 112 (347)
T ss_dssp HHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CC-------------TTEEEEESC
T ss_pred HhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cC-------------CcEEEEeCC
Confidence 3345678999999999999999999887 4 369999999999998774 22 12 789999999
Q ss_pred cccccccccc-C-CCcccEEEEec
Q 006731 369 VEELGESMQI-Q-PHSVDVLVSEW 390 (633)
Q Consensus 369 ~e~l~~~~~l-~-~~~~DvIvse~ 390 (633)
..++...... . .+++|.|+...
T Consensus 113 F~~l~~~L~~~g~~~~vDgILfDL 136 (347)
T 3tka_A 113 FSALGEYVAERDLIGKIDGILLDL 136 (347)
T ss_dssp GGGHHHHHHHTTCTTCEEEEEEEC
T ss_pred HHHHHHHHHhcCCCCcccEEEECC
Confidence 9887532111 1 13699999763
No 305
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.16 E-value=0.013 Score=62.04 Aligned_cols=103 Identities=23% Similarity=0.286 Sum_probs=65.6
Q ss_pred HHhCCCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEE
Q 006731 289 ILENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~ 366 (633)
+.+...+.+|.+||-+|+|. |.++..+|++ |+++|+++|.++..++.|+ +.|.. . ++.
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~----~lGa~--------------~--vi~ 244 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK----KFGVN--------------E--FVN 244 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH----TTTCC--------------E--EEC
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HcCCc--------------E--EEc
Confidence 34445678899999999986 8888888887 8889999999988776654 34432 1 222
Q ss_pred cc--ccccccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCC-cEEEe
Q 006731 367 GM--VEELGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG-GAILP 420 (633)
Q Consensus 367 gd--~e~l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~Lkpg-G~lip 420 (633)
.. -.++... ..+..+.+|+|+- ..|. +..+....+.|++| |+++.
T Consensus 245 ~~~~~~~~~~~i~~~~~gg~D~vid-~~g~--------~~~~~~~~~~l~~g~G~iv~ 293 (378)
T 3uko_A 245 PKDHDKPIQEVIVDLTDGGVDYSFE-CIGN--------VSVMRAALECCHKGWGTSVI 293 (378)
T ss_dssp GGGCSSCHHHHHHHHTTSCBSEEEE-CSCC--------HHHHHHHHHTBCTTTCEEEE
T ss_pred cccCchhHHHHHHHhcCCCCCEEEE-CCCC--------HHHHHHHHHHhhccCCEEEE
Confidence 11 1111100 0022348999984 2221 23556677899996 98873
No 306
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.13 E-value=0.012 Score=61.89 Aligned_cols=100 Identities=21% Similarity=0.235 Sum_probs=64.7
Q ss_pred CCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc--cc
Q 006731 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG--MV 369 (633)
Q Consensus 294 ~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g--d~ 369 (633)
.+.+|.+||-+|+|. |.++..+|++ |+++|++++.++.-.+.|++. .. ..+.+... +.
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~-----------------~~~~~~~~~~~~ 237 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP-----------------EVVTHKVERLSA 237 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT-----------------TCEEEECCSCCH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch-----------------hcccccccccch
Confidence 467899999999987 8888888887 887799999999988888775 21 22222110 11
Q ss_pred cccccc--cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 370 EELGES--MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 370 e~l~~~--~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+++... .......+|+|+-. .| . +..+....+.|++||+++.
T Consensus 238 ~~~~~~v~~~t~g~g~Dvvid~-~g----~----~~~~~~~~~~l~~~G~iv~ 281 (363)
T 3m6i_A 238 EESAKKIVESFGGIEPAVALEC-TG----V----ESSIAAAIWAVKFGGKVFV 281 (363)
T ss_dssp HHHHHHHHHHTSSCCCSEEEEC-SC----C----HHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHhCCCCCCEEEEC-CC----C----hHHHHHHHHHhcCCCEEEE
Confidence 111100 00124579999842 22 1 2345566788999999883
No 307
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.13 E-value=0.0083 Score=63.83 Aligned_cols=73 Identities=26% Similarity=0.178 Sum_probs=56.7
Q ss_pred CEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccc-
Q 006731 299 AVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQ- 377 (633)
Q Consensus 299 ~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~- 377 (633)
.+|+|+-||.|.+++-+.++|+..|.|+|+++.+++..+.+. ....++++|+.++.....
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~-------------------~~~~~~~~DI~~~~~~~~~ 63 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF-------------------PRSLHVQEDVSLLNAEIIK 63 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC-------------------TTSEEECCCGGGCCHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC-------------------CCCceEecChhhcCHHHHH
Confidence 589999999999999999999988899999998886666543 345678899988752110
Q ss_pred ---cCCCcccEEEEec
Q 006731 378 ---IQPHSVDVLVSEW 390 (633)
Q Consensus 378 ---l~~~~~DvIvse~ 390 (633)
+....+|+|+..+
T Consensus 64 ~~~~~~~~~D~i~ggp 79 (376)
T 3g7u_A 64 GFFKNDMPIDGIIGGP 79 (376)
T ss_dssp HHHCSCCCCCEEEECC
T ss_pred hhcccCCCeeEEEecC
Confidence 1246799999754
No 308
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.05 E-value=0.0036 Score=65.77 Aligned_cols=72 Identities=14% Similarity=0.143 Sum_probs=55.5
Q ss_pred CEEEEECCCcchHHHHHHHcC--CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 299 AVVMDIGCGTGILSLFAAQAG--ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 299 ~~VLDVGcGtG~lsl~~a~aG--a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
.+|||+.||.|.+++-+.++| ++.|+++|+++.+++..+.+.. ...++.+|+.++...
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-------------------~~~~~~~Di~~~~~~- 62 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-------------------HTQLLAKTIEGITLE- 62 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-------------------TSCEECSCGGGCCHH-
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-------------------ccccccCCHHHccHh-
Confidence 589999999999999999999 5689999999998877776642 234678999887521
Q ss_pred ccCCCcccEEEEec
Q 006731 377 QIQPHSVDVLVSEW 390 (633)
Q Consensus 377 ~l~~~~~DvIvse~ 390 (633)
.++...+|+|+..+
T Consensus 63 ~~~~~~~D~l~~gp 76 (343)
T 1g55_A 63 EFDRLSFDMILMSP 76 (343)
T ss_dssp HHHHHCCSEEEECC
T ss_pred HcCcCCcCEEEEcC
Confidence 12222699999764
No 309
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.01 E-value=0.0078 Score=64.45 Aligned_cols=46 Identities=30% Similarity=0.444 Sum_probs=38.8
Q ss_pred CCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHH
Q 006731 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQI 339 (633)
Q Consensus 294 ~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~ 339 (633)
.+.+|.+||-+|+|. |.++..+|++ |+++|++++.++.-.+.|++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 577899999999986 7888888876 888999999999888777654
No 310
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.01 E-value=0.014 Score=61.21 Aligned_cols=98 Identities=21% Similarity=0.264 Sum_probs=62.4
Q ss_pred CCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc---
Q 006731 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM--- 368 (633)
Q Consensus 294 ~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd--- 368 (633)
.+.+|.+||.+|+|. |.++..+|++ |+++|++++.++...+.+++ .|. + .++..+
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa--------------~--~vi~~~~~~ 227 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGA--------------D--LVLQISKES 227 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC--------------S--EEEECSSCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCC--------------C--EEEcCcccc
Confidence 467899999999986 8888888886 88799999999987766653 343 2 223222
Q ss_pred ccccccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 369 VEELGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 369 ~e~l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
..++... .......+|+|+-. .| . ...+....+.|+|||+++.
T Consensus 228 ~~~~~~~i~~~~~~g~D~vid~-~g----~----~~~~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 228 PQEIARKVEGQLGCKPEVTIEC-TG----A----EASIQAGIYATRSGGTLVL 271 (356)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEC-SC----C----HHHHHHHHHHSCTTCEEEE
T ss_pred cchHHHHHHHHhCCCCCEEEEC-CC----C----hHHHHHHHHHhcCCCEEEE
Confidence 1111100 00112579999842 22 1 2244556678999999883
No 311
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.97 E-value=0.017 Score=61.12 Aligned_cols=98 Identities=22% Similarity=0.352 Sum_probs=63.5
Q ss_pred CCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
.+.+|.+||-+|+|. |.++..+|++ |+++|++++.++...+.|++. |.. .++...-.+
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~----------------~vi~~~~~~ 238 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GAT----------------ATVDPSAGD 238 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS----------------EEECTTSSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC----------------EEECCCCcC
Confidence 467899999999986 7888888886 888999999999887766653 432 122211111
Q ss_pred cccc-cc---cCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 372 LGES-MQ---IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 372 l~~~-~~---l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+... .. +..+.+|+|+-. .|. ...+....+.|++||+++.
T Consensus 239 ~~~~i~~~~~~~~gg~Dvvid~-~G~--------~~~~~~~~~~l~~~G~vv~ 282 (370)
T 4ej6_A 239 VVEAIAGPVGLVPGGVDVVIEC-AGV--------AETVKQSTRLAKAGGTVVI 282 (370)
T ss_dssp HHHHHHSTTSSSTTCEEEEEEC-SCC--------HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHhhhhccCCCCCEEEEC-CCC--------HHHHHHHHHHhccCCEEEE
Confidence 1100 00 123489999842 221 2345666788999999883
No 312
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.93 E-value=0.026 Score=58.96 Aligned_cols=137 Identities=13% Similarity=0.175 Sum_probs=84.5
Q ss_pred hhhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCC-------CCCCCC
Q 006731 280 VRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDF-------WWDRPQ 351 (633)
Q Consensus 280 ~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl-------~~~~~~ 351 (633)
.|+..+.+.|.+.+...+...|+.+|||.......+... +..+++-||. |.+++.-++.+...+. ......
T Consensus 80 ~Rt~~iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~ 158 (334)
T 1rjd_A 80 LRTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTA 158 (334)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCC
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhccccccccc
Confidence 566666665544322235589999999999988888764 2337888888 6677676777665420 000000
Q ss_pred CCCCCCCCCcEEEEEccccccccc----ccc-CCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 352 SEGNINNAGKMEVVQGMVEELGES----MQI-QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 352 ~~~~~~~~~~I~vi~gd~e~l~~~----~~l-~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
.+.....+++.+++.+|+.+.... ... ......++|+|.+-.+| .+.....++..+...+ |+|.++
T Consensus 159 ~~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL-~~~~~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 159 KSPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYM-HNNESQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp CTTEEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGS-CHHHHHHHHHHHHHHC-SSEEEE
T ss_pred ccccccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCC-CHHHHHHHHHHHHhhC-CCcEEE
Confidence 000111237899999999875310 011 23568899999765544 4556777888777766 676654
No 313
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.93 E-value=0.0028 Score=66.48 Aligned_cols=99 Identities=23% Similarity=0.333 Sum_probs=64.2
Q ss_pred CCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccc
Q 006731 293 PSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (633)
Q Consensus 293 ~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e 370 (633)
..+.+|.+||-+|+|. |.++..+|++ |+++|+++|.++..++.+++. |. + .++..+-.
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga--------------~--~vi~~~~~ 221 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GA--------------T--DIINYKNG 221 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TC--------------C--EEECGGGS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CC--------------c--eEEcCCCc
Confidence 4567899999999987 8888888887 887999999999877677653 33 1 12222211
Q ss_pred ccccc-cc-cCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 371 ELGES-MQ-IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 371 ~l~~~-~~-l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
++... .. .....+|+|+- ..+. +..+....+.|+|||+++.
T Consensus 222 ~~~~~v~~~t~g~g~D~v~d-~~g~--------~~~~~~~~~~l~~~G~~v~ 264 (352)
T 3fpc_A 222 DIVEQILKATDGKGVDKVVI-AGGD--------VHTFAQAVKMIKPGSDIGN 264 (352)
T ss_dssp CHHHHHHHHTTTCCEEEEEE-CSSC--------TTHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHcCCCCCCEEEE-CCCC--------hHHHHHHHHHHhcCCEEEE
Confidence 11100 00 12347999984 2221 1245556678999999883
No 314
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.83 E-value=0.03 Score=59.01 Aligned_cols=101 Identities=20% Similarity=0.211 Sum_probs=63.9
Q ss_pred hCCCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 291 ~~~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
+...+.+|.+||-+|+|. |.++..+|++ |+++|++++.++...+.|++ .|. +. ++...
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa--------------~~--vi~~~ 244 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGA--------------TE--CLNPK 244 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTC--------------SE--EECGG
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCC--------------cE--EEecc
Confidence 344577899999999986 8888888876 88889999999877766653 343 21 22211
Q ss_pred c--cccccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCC-cEEEe
Q 006731 369 V--EELGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG-GAILP 420 (633)
Q Consensus 369 ~--e~l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~Lkpg-G~lip 420 (633)
- .++... ..+..+.+|+|+-. .|. ...+....+.|+++ |+++.
T Consensus 245 ~~~~~~~~~i~~~t~gg~Dvvid~-~g~--------~~~~~~~~~~l~~~~G~iv~ 291 (373)
T 1p0f_A 245 DYDKPIYEVICEKTNGGVDYAVEC-AGR--------IETMMNALQSTYCGSGVTVV 291 (373)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEEC-SCC--------HHHHHHHHHTBCTTTCEEEE
T ss_pred cccchHHHHHHHHhCCCCCEEEEC-CCC--------HHHHHHHHHHHhcCCCEEEE
Confidence 0 111100 00122479999842 221 23456667899999 99873
No 315
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.71 E-value=0.022 Score=61.28 Aligned_cols=64 Identities=16% Similarity=0.164 Sum_probs=51.7
Q ss_pred CCCCCEEEEECCCcchHHHHHH-Hc-C-CCeEEEEeCCHHHHHHHHHHHHh--C-CCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 295 LMKGAVVMDIGCGTGILSLFAA-QA-G-ASRVIAVEASEKMAAVATQIAKD--N-DFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a-~a-G-a~~V~aVD~S~~~~~~A~~~~~~--n-gl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
+.++.+|+||||+.|..++.++ +. | ..+|+|+|.+|..++..+++++. | +.. .++++++.-
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~-------------~~v~~~~~a 290 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFA-------------SRITVHGCG 290 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTG-------------GGEEEECSE
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCC-------------CCEEEEEeE
Confidence 4678999999999999999887 44 3 36999999999999999999987 3 342 578887765
Q ss_pred ccc
Q 006731 369 VEE 371 (633)
Q Consensus 369 ~e~ 371 (633)
+-+
T Consensus 291 l~~ 293 (409)
T 2py6_A 291 AGE 293 (409)
T ss_dssp ECS
T ss_pred EEC
Confidence 543
No 316
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.70 E-value=0.021 Score=60.81 Aligned_cols=45 Identities=22% Similarity=0.276 Sum_probs=37.9
Q ss_pred CCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHH
Q 006731 293 PSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVAT 337 (633)
Q Consensus 293 ~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~ 337 (633)
..+.+|.+||.+|||. |.++..+|++ |+.+|+++|.++..++.|+
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 3567899999999987 8888888886 8889999999998776654
No 317
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.67 E-value=0.045 Score=57.64 Aligned_cols=101 Identities=22% Similarity=0.312 Sum_probs=63.9
Q ss_pred hCCCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 291 ~~~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
+...+.+|.+||-+|+|. |.++..+|++ |+++|++++.++...+.+++. |. +. ++...
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga--------------~~--vi~~~ 243 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GA--------------TE--CINPQ 243 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TC--------------SE--EECGG
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CC--------------ce--Eeccc
Confidence 344567899999999986 7888888876 887899999998877676643 33 21 22111
Q ss_pred c--cccccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCC-cEEEe
Q 006731 369 V--EELGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG-GAILP 420 (633)
Q Consensus 369 ~--e~l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~Lkpg-G~lip 420 (633)
- .++... ..+..+.+|+|+-. .|. ...+....+.|+|+ |+++.
T Consensus 244 ~~~~~~~~~v~~~~~~g~D~vid~-~g~--------~~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 244 DFSKPIQEVLIEMTDGGVDYSFEC-IGN--------VKVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEEC-SCC--------HHHHHHHHHTBCTTTCEEEE
T ss_pred cccccHHHHHHHHhCCCCCEEEEC-CCc--------HHHHHHHHHhhccCCcEEEE
Confidence 0 111100 00122479999842 221 23456667899999 99873
No 318
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.66 E-value=0.036 Score=58.48 Aligned_cols=101 Identities=18% Similarity=0.242 Sum_probs=63.5
Q ss_pred hCCCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 291 ~~~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
+...+.+|.+||-+|+|. |.++..+|++ |+++|++++.++...+.|++ .|.. . ++...
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--------------~--vi~~~ 248 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT--------------D--CLNPR 248 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS--------------E--EECGG
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc--------------E--EEccc
Confidence 344577899999999986 7888888876 88789999999877766653 3432 1 12111
Q ss_pred c--cccccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCC-cEEEe
Q 006731 369 V--EELGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG-GAILP 420 (633)
Q Consensus 369 ~--e~l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~Lkpg-G~lip 420 (633)
- .++... ..+..+.+|+|+- ..|. ...+....+.|+++ |+++.
T Consensus 249 ~~~~~~~~~v~~~~~~g~Dvvid-~~G~--------~~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 249 ELDKPVQDVITELTAGGVDYSLD-CAGT--------AQTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp GCSSCHHHHHHHHHTSCBSEEEE-SSCC--------HHHHHHHHHTBCTTTCEEEE
T ss_pred cccchHHHHHHHHhCCCccEEEE-CCCC--------HHHHHHHHHHhhcCCCEEEE
Confidence 0 111100 0011247999984 2221 23456667899999 99874
No 319
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=95.66 E-value=0.01 Score=44.01 Aligned_cols=52 Identities=23% Similarity=0.347 Sum_probs=42.2
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHH
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~ 123 (633)
.+..|-.|+..|.+...+..||+..++- ....|..|++.|.....|..||+.
T Consensus 3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------------~~~~C~~C~~~f~~~~~l~~H~~~ 54 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLNIHLRTHTGE---------------------------KPYKCEFCEYAAAQKTSLRYHLER 54 (57)
T ss_dssp --CBCTTTCCBCSCHHHHHHHHHHHHCC---------------------------CCEECSSSSCEESSHHHHHHHHHH
T ss_pred CCccCCCCcchhCChHHHHHHHHHcCCC---------------------------CCcCCCCCcchhCCHHHHHHHHHH
Confidence 4689999999999999999999865430 124599999999999999999964
No 320
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.61 E-value=0.029 Score=58.34 Aligned_cols=99 Identities=18% Similarity=0.133 Sum_probs=63.6
Q ss_pred CCCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccc
Q 006731 292 NPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (633)
Q Consensus 292 ~~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~ 369 (633)
.....+|.+||-+|+|. |.++..+|++ |+ +|++++.++...+.+++ .|. +. ++...-
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa--------------~~--~i~~~~ 219 (340)
T 3s2e_A 161 VTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARR----LGA--------------EV--AVNARD 219 (340)
T ss_dssp TTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTC--------------SE--EEETTT
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH----cCC--------------CE--EEeCCC
Confidence 34677899999999986 8888888886 88 99999999987766654 343 21 232222
Q ss_pred cccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 370 EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 370 e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
.++........+.+|+|+-.. + . ...+....+.|+|+|+++.
T Consensus 220 ~~~~~~~~~~~g~~d~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 261 (340)
T 3s2e_A 220 TDPAAWLQKEIGGAHGVLVTA-V----S----PKAFSQAIGMVRRGGTIAL 261 (340)
T ss_dssp SCHHHHHHHHHSSEEEEEESS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred cCHHHHHHHhCCCCCEEEEeC-C----C----HHHHHHHHHHhccCCEEEE
Confidence 222100000113689988432 1 1 2355666788999999884
No 321
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.58 E-value=0.03 Score=58.40 Aligned_cols=71 Identities=23% Similarity=0.266 Sum_probs=55.2
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
..+.+|||+.||.|.+++-+.++|+..|+++|+++.+++..+.+.. ... ++|+.++...
T Consensus 9 ~~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~------------------~~~---~~Di~~~~~~ 67 (327)
T 2c7p_A 9 LTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFG------------------EKP---EGDITQVNEK 67 (327)
T ss_dssp TTTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHS------------------CCC---BSCGGGSCGG
T ss_pred cCCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC------------------CCC---cCCHHHcCHh
Confidence 3568999999999999999999999899999999998877776652 111 5888877521
Q ss_pred cccCCCcccEEEEec
Q 006731 376 MQIQPHSVDVLVSEW 390 (633)
Q Consensus 376 ~~l~~~~~DvIvse~ 390 (633)
.+ ..+|+|+..+
T Consensus 68 -~~--~~~D~l~~gp 79 (327)
T 2c7p_A 68 -TI--PDHDILCAGF 79 (327)
T ss_dssp -GS--CCCSEEEEEC
T ss_pred -hC--CCCCEEEECC
Confidence 12 3599999763
No 322
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.56 E-value=0.044 Score=57.78 Aligned_cols=101 Identities=19% Similarity=0.243 Sum_probs=63.4
Q ss_pred hCCCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 291 ~~~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
+...+.+|.+||-+|+|. |.++..+|++ |+++|++++.++..++.+++ .|. +. ++...
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa--------------~~--vi~~~ 245 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGA--------------TD--FVNPN 245 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC--------------CE--EECGG
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCC--------------ce--EEecc
Confidence 344567899999999986 7888888876 88789999999887766653 343 21 22111
Q ss_pred c--cccccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCC-cEEEe
Q 006731 369 V--EELGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG-GAILP 420 (633)
Q Consensus 369 ~--e~l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~Lkpg-G~lip 420 (633)
- .++... ..+..+.+|+|+-. .|. ...+....+.|+|+ |+++.
T Consensus 246 ~~~~~~~~~~~~~~~~g~D~vid~-~g~--------~~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 246 DHSEPISQVLSKMTNGGVDFSLEC-VGN--------VGVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp GCSSCHHHHHHHHHTSCBSEEEEC-SCC--------HHHHHHHHHTBCTTTCEEEE
T ss_pred ccchhHHHHHHHHhCCCCCEEEEC-CCC--------HHHHHHHHHHhhcCCcEEEE
Confidence 0 111100 00112479999842 221 23456667899999 99873
No 323
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.47 E-value=0.019 Score=59.88 Aligned_cols=89 Identities=20% Similarity=0.161 Sum_probs=61.5
Q ss_pred CCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
.+.+|.+||-+|+|. |.++..+|++ |+ +|++++.++...+.+++ .|. +.+ + .+...
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa--------------~~v--~-~~~~~ 230 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALS----MGV--------------KHF--Y-TDPKQ 230 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHH----TTC--------------SEE--E-SSGGG
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHh----cCC--------------Cee--c-CCHHH
Confidence 567899999999987 8888888886 88 89999999877766654 444 222 2 33333
Q ss_pred cccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 372 LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+. ..+|+|+-. .+. . ..+....+.|+|+|+++.
T Consensus 231 ~~-------~~~D~vid~-~g~----~----~~~~~~~~~l~~~G~iv~ 263 (348)
T 3two_A 231 CK-------EELDFIIST-IPT----H----YDLKDYLKLLTYNGDLAL 263 (348)
T ss_dssp CC-------SCEEEEEEC-CCS----C----CCHHHHHTTEEEEEEEEE
T ss_pred Hh-------cCCCEEEEC-CCc----H----HHHHHHHHHHhcCCEEEE
Confidence 22 379999842 221 1 124455679999999884
No 324
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.45 E-value=0.042 Score=57.82 Aligned_cols=94 Identities=13% Similarity=0.143 Sum_probs=60.6
Q ss_pred CCCEEEEEC-CCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 297 KGAVVMDIG-CGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 297 ~~~~VLDVG-cGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
+|.+||-+| +|. |.++..+|++ +..+|++++.++.-.+.+++ .|. +. ++... .++.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGa--------------d~--vi~~~-~~~~ 229 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGA--------------HH--VIDHS-KPLA 229 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTC--------------SE--EECTT-SCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCC--------------CE--EEeCC-CCHH
Confidence 789999999 665 8999999986 55599999999887766654 343 21 12111 1111
Q ss_pred cc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 374 ES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 374 ~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
.. ..+..+.+|+|+-. .| -...+....+.|+|+|+++.
T Consensus 230 ~~v~~~~~~g~Dvvid~-~g--------~~~~~~~~~~~l~~~G~iv~ 268 (363)
T 4dvj_A 230 AEVAALGLGAPAFVFST-TH--------TDKHAAEIADLIAPQGRFCL 268 (363)
T ss_dssp HHHHTTCSCCEEEEEEC-SC--------HHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHhcCCCceEEEEC-CC--------chhhHHHHHHHhcCCCEEEE
Confidence 00 01234679999842 22 12355666788999999884
No 325
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.39 E-value=0.027 Score=59.90 Aligned_cols=46 Identities=26% Similarity=0.310 Sum_probs=38.6
Q ss_pred CCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHH
Q 006731 293 PSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQ 338 (633)
Q Consensus 293 ~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~ 338 (633)
..+.+|.+||-+|+|. |.++..+|++ |+++|+++|.++..++.|++
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 3567899999999987 8888888886 88889999999988766654
No 326
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.38 E-value=0.053 Score=57.11 Aligned_cols=101 Identities=18% Similarity=0.261 Sum_probs=63.0
Q ss_pred hCCCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 291 ~~~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
+...+.+|.+||-+|+|. |.++..+|++ |+++|++++.++...+.+++ .|. +. ++...
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa--------------~~--vi~~~ 244 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGA--------------TE--CVNPQ 244 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC--------------SE--EECGG
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCC--------------ce--Eeccc
Confidence 344567899999999986 7788788776 88789999999877766653 343 21 22111
Q ss_pred c--cccccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCC-cEEEe
Q 006731 369 V--EELGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG-GAILP 420 (633)
Q Consensus 369 ~--e~l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~Lkpg-G~lip 420 (633)
- .++... ..+..+.+|+|+-. .|. ...+....+.|+++ |+++.
T Consensus 245 ~~~~~~~~~~~~~~~~g~D~vid~-~g~--------~~~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 245 DYKKPIQEVLTEMSNGGVDFSFEV-IGR--------LDTMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEEC-SCC--------HHHHHHHHHHBCTTTCEEEE
T ss_pred ccchhHHHHHHHHhCCCCcEEEEC-CCC--------HHHHHHHHHHhhcCCcEEEE
Confidence 0 111100 00122479999842 221 23455667789999 99873
No 327
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.31 E-value=0.041 Score=58.24 Aligned_cols=99 Identities=24% Similarity=0.353 Sum_probs=62.2
Q ss_pred CC-CCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc-
Q 006731 293 PS-LMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM- 368 (633)
Q Consensus 293 ~~-~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd- 368 (633)
.. +.+|.+||-+|+|. |.++..+|++ |+.+|++++.++...+.+++ .|. + .++..+
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa--------------~--~vi~~~~ 249 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGA--------------D--LTLNRRE 249 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTC--------------S--EEEETTT
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCC--------------c--EEEeccc
Confidence 45 67899999999886 7888888876 76699999999987766653 343 2 223322
Q ss_pred --ccccccc-ccc-CCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 369 --VEELGES-MQI-QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 369 --~e~l~~~-~~l-~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
-.++... ..+ ....+|+|+-. .|. ...+....+.|+|+|+++.
T Consensus 250 ~~~~~~~~~v~~~~~g~g~Dvvid~-~g~--------~~~~~~~~~~l~~~G~iv~ 296 (380)
T 1vj0_A 250 TSVEERRKAIMDITHGRGADFILEA-TGD--------SRALLEGSELLRRGGFYSV 296 (380)
T ss_dssp SCHHHHHHHHHHHTTTSCEEEEEEC-SSC--------TTHHHHHHHHEEEEEEEEE
T ss_pred cCcchHHHHHHHHhCCCCCcEEEEC-CCC--------HHHHHHHHHHHhcCCEEEE
Confidence 1111100 001 22479999842 221 1234555678999999873
No 328
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.25 E-value=0.035 Score=57.82 Aligned_cols=97 Identities=22% Similarity=0.266 Sum_probs=63.1
Q ss_pred CCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
...+|.+||-+|+|. |.++..+|++ |..+|+++|.++.-.+.+++ .|.. . ++..+- +
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~--------------~--~i~~~~-~ 226 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGAD--------------A--AVKSGA-G 226 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCS--------------E--EEECST-T
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCC--------------E--EEcCCC-c
Confidence 467899999999987 8888888886 56799999999987766654 3442 2 222211 1
Q ss_pred cccc-ccc-CCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 372 LGES-MQI-QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 372 l~~~-~~l-~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+... ..+ ....+|+|+- ..|. +..+....+.|+|+|+++.
T Consensus 227 ~~~~v~~~t~g~g~d~v~d-~~G~--------~~~~~~~~~~l~~~G~iv~ 268 (345)
T 3jv7_A 227 AADAIRELTGGQGATAVFD-FVGA--------QSTIDTAQQVVAVDGHISV 268 (345)
T ss_dssp HHHHHHHHHGGGCEEEEEE-SSCC--------HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHhCCCCCeEEEE-CCCC--------HHHHHHHHHHHhcCCEEEE
Confidence 1100 001 2247999984 2221 2355666788999999884
No 329
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=95.15 E-value=0.025 Score=41.89 Aligned_cols=51 Identities=18% Similarity=0.423 Sum_probs=41.9
Q ss_pred CceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHH
Q 006731 46 GFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (633)
Q Consensus 46 ~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~ 123 (633)
|..|-.|+..|.+...+..||+..++- ....|..||+.|.....|..||+.
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------------~~~~C~~C~~~f~~~~~l~~H~~~ 51 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRTHTDV---------------------------RPYHCTYCNFSFKTKGNLTKHMKS 51 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTSSC---------------------------CCEECSSSSCEESSHHHHHHHHHS
T ss_pred CCcCCCCcCcCCCHHHHHHHHHhcCCC---------------------------CCccCCCCCchhcCHHHHHHHHHH
Confidence 457999999999999999999865431 114699999999999999999963
No 330
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.13 E-value=0.019 Score=45.71 Aligned_cols=57 Identities=26% Similarity=0.444 Sum_probs=46.8
Q ss_pred CCCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHH
Q 006731 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (633)
Q Consensus 44 ~~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~ 123 (633)
..+..|-.|++.|.+...+..||+..|.=. .....|..|++.|.....|..||+.
T Consensus 13 ~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~-------------------------~~~~~C~~C~~~f~~~~~L~~H~~~ 67 (77)
T 2ct1_A 13 EKPYECYICHARFTQSGTMKMHILQKHTEN-------------------------VAKFHCPHCDTVIARKSDLGVHLRK 67 (77)
T ss_dssp CCSEECTTTCCEESCHHHHHHHHHHHSSSS-------------------------CSSEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCeECCCcCchhCCHHHHHHHHHHhcCCC-------------------------CCccCCCCCCCccCCHHHHHHHHHH
Confidence 357899999999999999999998777421 0124699999999999999999986
Q ss_pred hc
Q 006731 124 AY 125 (633)
Q Consensus 124 ~~ 125 (633)
.+
T Consensus 68 ~H 69 (77)
T 2ct1_A 68 QH 69 (77)
T ss_dssp TS
T ss_pred hC
Confidence 54
No 331
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.11 E-value=0.018 Score=47.52 Aligned_cols=82 Identities=18% Similarity=0.225 Sum_probs=53.2
Q ss_pred CCCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhccc----ccccccCCccCCHHHHHH
Q 006731 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE----NRCWICGLTCQSNQDLQN 119 (633)
Q Consensus 44 ~~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~----~~C~~C~~~~~~~~~~~~ 119 (633)
..+..|-.|+..|.+...+..||+..++-. ......=+.-|...-.|..-+|..... ..|..|++.|.....|+.
T Consensus 5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~ 83 (95)
T 2yt9_A 5 SSGVACEICGKIFRDVYHLNRHKLSHSGEK-PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG 83 (95)
T ss_dssp CSCEECSSSCCEESSSHHHHHHHHHSCSSC-SEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred CCCeECCCCCCccCChHHHHHHHHhcCCCC-CCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence 357899999999999999999998654421 111111122233333344555544332 459999999999999999
Q ss_pred HHHHhcc
Q 006731 120 HLHEAYN 126 (633)
Q Consensus 120 Hm~~~~~ 126 (633)
||+..+.
T Consensus 84 H~~~~H~ 90 (95)
T 2yt9_A 84 HIKQVHS 90 (95)
T ss_dssp HHHHTSC
T ss_pred HHHHhcC
Confidence 9976543
No 332
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.06 E-value=0.022 Score=44.70 Aligned_cols=53 Identities=26% Similarity=0.488 Sum_probs=43.9
Q ss_pred CCCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHH
Q 006731 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (633)
Q Consensus 44 ~~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~ 123 (633)
..+..|-.|++.|.+...+..||+..++- ....|..|++.|.....|+.||+.
T Consensus 12 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~---------------------------~~~~C~~C~~~f~~~~~L~~H~~~ 64 (72)
T 1x6e_A 12 EKPYGCVECGKAFSRSSILVQHQRVHTGE---------------------------KPYKCLECGKAFSQNSGLINHQRI 64 (72)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHGGGCS---------------------------CCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCccCCCCCCccCCHHHHHHHHHhcCCC---------------------------CCeECCCCCcccCCHHHHHHHHHh
Confidence 35799999999999999999999864320 114699999999999999999974
No 333
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.95 E-value=0.048 Score=57.31 Aligned_cols=102 Identities=24% Similarity=0.235 Sum_probs=64.2
Q ss_pred HHHhCCCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 288 AILENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
++.+...+.+|.+||-+|+|. |.++..+|++ |+ +|++++.++..++.+++. |.. .++
T Consensus 180 al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~----------------~vi 238 (363)
T 3uog_A 180 ALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFAL----GAD----------------HGI 238 (363)
T ss_dssp HHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH----TCS----------------EEE
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHc----CCC----------------EEE
Confidence 343445678899999999886 7888888876 88 999999998877666553 332 122
Q ss_pred Ecccccccccc-c-cCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 QGMVEELGESM-Q-IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 ~gd~e~l~~~~-~-l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
..+..++.... . .....+|+|+-. .| . . .+....+.|+|+|.++.
T Consensus 239 ~~~~~~~~~~v~~~~~g~g~D~vid~-~g----~-~----~~~~~~~~l~~~G~iv~ 285 (363)
T 3uog_A 239 NRLEEDWVERVYALTGDRGADHILEI-AG----G-A----GLGQSLKAVAPDGRISV 285 (363)
T ss_dssp ETTTSCHHHHHHHHHTTCCEEEEEEE-TT----S-S----CHHHHHHHEEEEEEEEE
T ss_pred cCCcccHHHHHHHHhCCCCceEEEEC-CC----h-H----HHHHHHHHhhcCCEEEE
Confidence 22212211000 0 123479999853 22 1 1 23445678999999883
No 334
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=94.94 E-value=0.019 Score=44.04 Aligned_cols=55 Identities=18% Similarity=0.338 Sum_probs=45.1
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~~ 124 (633)
.+..|-.|+..|.+...+..||+..|.- ......|..||+.|.....|..||+..
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~-------------------------~~~~~~C~~C~k~f~~~~~L~~H~~~~ 63 (66)
T 2drp_A 9 HTYRCKVCSRVYTHISNFCRHYVTSHKR-------------------------NVKVYPCPFCFKEFTRKDNMTAHVKII 63 (66)
T ss_dssp TEEECTTTCCEESSHHHHHHHHHHHSSS-------------------------SCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred cceECCCCcchhCCHHHHHHHHHHHcCC-------------------------CCcCeECCCCCCccCCHHHHHHHHHHH
Confidence 5789999999999999999999987731 011246999999999999999999753
No 335
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.89 E-value=0.026 Score=43.88 Aligned_cols=54 Identities=20% Similarity=0.297 Sum_probs=44.4
Q ss_pred CCCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHH
Q 006731 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (633)
Q Consensus 44 ~~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~ 123 (633)
..+..|-.|++.|.+...+..||+..++ .....|..|++.|.....|..||+.
T Consensus 7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~---------------------------~~~~~C~~C~~~f~~~~~L~~H~~~ 59 (70)
T 1x5w_A 7 GHPEKCSECSYSCSSKAALRIHERIHCT---------------------------DRPFKCNYCSFDTKQPSNLSKHMKK 59 (70)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHGGGCC---------------------------SCSEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHcCC---------------------------CCCEeCCCCCCccCCHHHHHHHHHH
Confidence 3679999999999999999999986332 0113699999999999999999975
Q ss_pred h
Q 006731 124 A 124 (633)
Q Consensus 124 ~ 124 (633)
.
T Consensus 60 h 60 (70)
T 1x5w_A 60 F 60 (70)
T ss_dssp H
T ss_pred H
Confidence 4
No 336
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.85 E-value=0.073 Score=55.46 Aligned_cols=92 Identities=22% Similarity=0.253 Sum_probs=58.1
Q ss_pred CCCEEEEE-CCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 297 KGAVVMDI-GCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 297 ~~~~VLDV-GcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
+|.+||-+ |+|. |.++..++++ |+ +|++++.++.-++.+++. |. +.+ +..+ .++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga--------------~~v--i~~~-~~~~ 207 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM----GA--------------DIV--LNHK-ESLL 207 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH----TC--------------SEE--ECTT-SCHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CC--------------cEE--EECC-ccHH
Confidence 79999999 5665 7777777776 88 999999999877777653 33 211 2111 1111
Q ss_pred cc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 374 ES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 374 ~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
.. .......+|+|+-. .| -...+....+.|+++|+++
T Consensus 208 ~~~~~~~~~g~Dvv~d~-~g--------~~~~~~~~~~~l~~~G~iv 245 (346)
T 3fbg_A 208 NQFKTQGIELVDYVFCT-FN--------TDMYYDDMIQLVKPRGHIA 245 (346)
T ss_dssp HHHHHHTCCCEEEEEES-SC--------HHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHhCCCCccEEEEC-CC--------chHHHHHHHHHhccCCEEE
Confidence 00 00223579999842 21 1334566678899999987
No 337
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.85 E-value=0.024 Score=46.81 Aligned_cols=79 Identities=22% Similarity=0.265 Sum_probs=51.1
Q ss_pred CCCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhccc--ccccccCCccCCHHHHHHHH
Q 006731 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNHL 121 (633)
Q Consensus 44 ~~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~--~~C~~C~~~~~~~~~~~~Hm 121 (633)
..+..|-.|+..|.+...+..||+..++-... ....=+.-|...-.|..-++..... ..|..|++.|.....|..||
T Consensus 6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~ 84 (96)
T 2dmd_A 6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPY-KCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL 84 (96)
T ss_dssp CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSE-ECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHH
T ss_pred CcCeECCCCCCccCCHHHHHHHHHhcCCCCCE-eCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence 35789999999999999999999966542110 0011112222323344444443333 34999999999988999998
Q ss_pred HH
Q 006731 122 HE 123 (633)
Q Consensus 122 ~~ 123 (633)
+.
T Consensus 85 ~~ 86 (96)
T 2dmd_A 85 RS 86 (96)
T ss_dssp TT
T ss_pred HH
Confidence 63
No 338
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=94.78 E-value=0.036 Score=43.62 Aligned_cols=53 Identities=23% Similarity=0.425 Sum_probs=43.8
Q ss_pred CCCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHH
Q 006731 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (633)
Q Consensus 44 ~~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~ 123 (633)
..+..|-.|++.|.+...+..||+..++ .....|..|++.|.....|+.||+.
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~---------------------------~~~~~C~~C~k~f~~~~~L~~H~~~ 67 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTVHTG---------------------------EKPYRCNICGAQFNRPANLKTHTRI 67 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHHHCC---------------------------CCSEECTTTCCEESCHHHHHHHHHH
T ss_pred CCCeECCCCCceeCCHHHHHHHHHHcCC---------------------------CCCEECCCCCchhCCHHHHHHHHHh
Confidence 4678999999999999999999986432 0114699999999999999999964
No 339
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.77 E-value=0.046 Score=57.67 Aligned_cols=94 Identities=24% Similarity=0.240 Sum_probs=60.6
Q ss_pred CCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
.+.+|.+||-+|+|. |.++..+|++ |+ +|++++.++..++.+++. |. + .++...-.+
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~l----Ga--------------~--~vi~~~~~~ 249 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL----GA--------------D--EVVNSRNAD 249 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH----TC--------------S--EEEETTCHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CC--------------c--EEeccccHH
Confidence 567899999999986 7888888876 88 699999998877676642 33 2 122222111
Q ss_pred cccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 372 LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
.... +. ..+|+|+-. .|. . ..+....+.|+|+|.++.
T Consensus 250 ~~~~--~~-~g~Dvvid~-~g~----~----~~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 250 EMAA--HL-KSFDFILNT-VAA----P----HNLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp HHHT--TT-TCEEEEEEC-CSS----C----CCHHHHHTTEEEEEEEEE
T ss_pred HHHH--hh-cCCCEEEEC-CCC----H----HHHHHHHHHhccCCEEEE
Confidence 1100 22 579999842 221 1 123445678999999873
No 340
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.67 E-value=0.049 Score=55.87 Aligned_cols=91 Identities=19% Similarity=0.109 Sum_probs=60.2
Q ss_pred hCCCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 291 ~~~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
+...+.+|.+||-+|+|. |.++..+|++ |+ +|++++ ++.-.+.+++. |. -.++. |
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l----Ga----------------~~v~~-d 192 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR----GV----------------RHLYR-E 192 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH----TE----------------EEEES-S
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc----CC----------------CEEEc-C
Confidence 555678899999999975 8888888887 88 999999 87766666552 32 12232 3
Q ss_pred ccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 369 ~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.+. + ...+|+|+- ..|. +. +....+.|+|+|+++.-
T Consensus 193 ~~~------v-~~g~Dvv~d-~~g~--------~~-~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 193 PSQ------V-TQKYFAIFD-AVNS--------QN-AAALVPSLKANGHIICI 228 (315)
T ss_dssp GGG------C-CSCEEEEEC-C----------------TTGGGEEEEEEEEEE
T ss_pred HHH------h-CCCccEEEE-CCCc--------hh-HHHHHHHhcCCCEEEEE
Confidence 111 3 468999984 2221 11 13456899999998843
No 341
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.59 E-value=0.023 Score=59.30 Aligned_cols=99 Identities=26% Similarity=0.359 Sum_probs=61.6
Q ss_pred CCCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccc
Q 006731 292 NPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (633)
Q Consensus 292 ~~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~ 369 (633)
...+ +|.+||-+|+|. |.++..+|++ |+++|++++.++...+.+++. |. +. ++..+-
T Consensus 163 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga--------------~~--~~~~~~ 221 (348)
T 2d8a_A 163 AGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GA--------------DY--VINPFE 221 (348)
T ss_dssp TSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TC--------------SE--EECTTT
T ss_pred hcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CC--------------CE--EECCCC
Confidence 3456 899999999975 7777777775 877899999998877666543 32 11 122111
Q ss_pred ccccccc-cc-CCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 370 EELGESM-QI-QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 370 e~l~~~~-~l-~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
.++.... .+ ....+|+|+.. .+. ...+....+.|+++|+++.
T Consensus 222 ~~~~~~v~~~~~g~g~D~vid~-~g~--------~~~~~~~~~~l~~~G~iv~ 265 (348)
T 2d8a_A 222 EDVVKEVMDITDGNGVDVFLEF-SGA--------PKALEQGLQAVTPAGRVSL 265 (348)
T ss_dssp SCHHHHHHHHTTTSCEEEEEEC-SCC--------HHHHHHHHHHEEEEEEEEE
T ss_pred cCHHHHHHHHcCCCCCCEEEEC-CCC--------HHHHHHHHHHHhcCCEEEE
Confidence 1111000 01 22469999853 221 2345566788999999873
No 342
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=94.57 E-value=0.039 Score=41.33 Aligned_cols=52 Identities=19% Similarity=0.391 Sum_probs=42.3
Q ss_pred CceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 006731 46 GFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (633)
Q Consensus 46 ~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~~ 124 (633)
+..|-.|+..|.+...+..||+..++- ....|..|++.|.....|..||...
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------------~~~~C~~C~~~f~~~~~l~~H~~~~ 53 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRSHTNE---------------------------KPYPCGLCNRAFTRRDLLIRHAQKI 53 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHTTTSS---------------------------CSEECTTTCCEESSHHHHHHHHTTT
T ss_pred cCcCCCCccccCCHHHHHHHHHHhCCC---------------------------CCccCCCCCCccCCHHHHHHHHHHH
Confidence 568999999999999999999864320 1236999999999999999998543
No 343
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=94.49 E-value=0.2 Score=51.60 Aligned_cols=129 Identities=11% Similarity=0.024 Sum_probs=83.5
Q ss_pred hhhhHHHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 006731 279 KVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINN 358 (633)
Q Consensus 279 ~~R~~~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~ 358 (633)
..|+..+.+++....... ...|++||||-=.....+......+|+=|| -|.+++..++.+...+.. .
T Consensus 85 ~~Rt~~~d~~v~~~~~~g-~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~-----------~ 151 (310)
T 2uyo_A 85 AVRTNFFDTYFNNAVIDG-IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVT-----------P 151 (310)
T ss_dssp HHHHHHHHHHHHHHHHTT-CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCC-----------C
T ss_pred HHHHHHHHHHHHHHHHhC-CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCC-----------C
Confidence 356655655555532211 257999999975554444321124899999 588888888888765431 1
Q ss_pred CCcEEEEEccccccccc-----cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 359 AGKMEVVQGMVEELGES-----MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 359 ~~~I~vi~gd~e~l~~~-----~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
..+..++.+|+.+ .-. ..+.....=++++|.+-+++.. .....++..+...+.||+.++.+.
T Consensus 152 ~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~-~~~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 152 TADRREVPIDLRQ-DWPPALRSAGFDPSARTAWLAEGLLMYLPA-TAQDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp SSEEEEEECCTTS-CHHHHHHHTTCCTTSCEEEEECSCGGGSCH-HHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred CCCeEEEecchHh-hHHHHHHhccCCCCCCEEEEEechHhhCCH-HHHHHHHHHHHHhCCCCeEEEEEe
Confidence 2778999999986 210 0122234557777866555543 467888999988889999988664
No 344
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=94.49 E-value=0.017 Score=46.10 Aligned_cols=75 Identities=17% Similarity=0.269 Sum_probs=40.6
Q ss_pred ceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhccc--ccccccCCccCCHHHHHHHHH
Q 006731 47 FLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNHLH 122 (633)
Q Consensus 47 ~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~--~~C~~C~~~~~~~~~~~~Hm~ 122 (633)
..|-.|+..|.+...+..||+..++--... ...=+.-|...-.|..-++..... ..|..||+.|.....|..||+
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~ 78 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYP-CQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR 78 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHHTCCCEE-CSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHH
T ss_pred ccCCCCcccccCchhHHHHHHHcCCCCCee-CCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHH
Confidence 467777777777777777777544310000 000011122222233333332222 348888888888888888886
No 345
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=94.43 E-value=0.05 Score=45.81 Aligned_cols=79 Identities=19% Similarity=0.211 Sum_probs=51.3
Q ss_pred CCCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhccc--ccccccCCccCCHHHHHHHH
Q 006731 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNHL 121 (633)
Q Consensus 44 ~~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~--~~C~~C~~~~~~~~~~~~Hm 121 (633)
..+..|-.|+..|.+...+..||+..++-... ....=+.-|...-.|..-++..... ..|..|++.|.....|..||
T Consensus 15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~ 93 (106)
T 2ee8_A 15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPY-TCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK 93 (106)
T ss_dssp CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCC-BCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred CcCeECCCCCCccCCHHHHHHHHHHcCCCCCc-CCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence 45789999999999999999999876652110 0111122233322333333333322 35999999999999999999
Q ss_pred HH
Q 006731 122 HE 123 (633)
Q Consensus 122 ~~ 123 (633)
+.
T Consensus 94 ~~ 95 (106)
T 2ee8_A 94 TL 95 (106)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 346
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.42 E-value=0.081 Score=55.17 Aligned_cols=97 Identities=24% Similarity=0.310 Sum_probs=60.6
Q ss_pred CCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccc-c
Q 006731 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV-E 370 (633)
Q Consensus 294 ~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~-e 370 (633)
.+.+|.+||-+|+|. |.++..+|++ |+ +|++++.++...+.+++ .|. + .++..+- .
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa--------------~--~~~~~~~~~ 223 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKN----CGA--------------D--VTLVVDPAK 223 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTC--------------S--EEEECCTTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHH----hCC--------------C--EEEcCcccc
Confidence 467899999999986 7777777775 88 59999999987766653 343 2 1222210 1
Q ss_pred cccccc-c-cC---CCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 371 ELGESM-Q-IQ---PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 371 ~l~~~~-~-l~---~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
++.... . .+ ...+|+|+-. .+. ...+....+.|+|+|+++.
T Consensus 224 ~~~~~i~~~~~~~~g~g~D~vid~-~g~--------~~~~~~~~~~l~~~G~iv~ 269 (352)
T 1e3j_A 224 EEESSIIERIRSAIGDLPNVTIDC-SGN--------EKCITIGINITRTGGTLML 269 (352)
T ss_dssp SCHHHHHHHHHHHSSSCCSEEEEC-SCC--------HHHHHHHHHHSCTTCEEEE
T ss_pred cHHHHHHHHhccccCCCCCEEEEC-CCC--------HHHHHHHHHHHhcCCEEEE
Confidence 111000 0 11 2469999852 221 2244556678999999883
No 347
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.36 E-value=0.032 Score=44.34 Aligned_cols=57 Identities=19% Similarity=0.272 Sum_probs=45.5
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~~ 124 (633)
.+..|-.|++.|.....+..||+..++- .......|..|++.|.....|..||+..
T Consensus 6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~------------------------~~~~~~~C~~C~k~f~~~~~L~~H~~~~ 61 (78)
T 2d9h_A 6 SGLQCEICGFTCRQKASLNWHQRKHAET------------------------VAALRFPCEFCGKRFEKPDSVAAHRSKS 61 (78)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHHHHH------------------------TTTCCEECTTTCCEESSHHHHHHHHHHT
T ss_pred cCeECCCCCCeeCCHHHHHHHHHHhhcc------------------------CCCcccCCCCCCchhCCHHHHHHHHHHh
Confidence 5789999999999999999999876541 0111245999999999999999999654
Q ss_pred c
Q 006731 125 Y 125 (633)
Q Consensus 125 ~ 125 (633)
+
T Consensus 62 H 62 (78)
T 2d9h_A 62 H 62 (78)
T ss_dssp S
T ss_pred C
Confidence 3
No 348
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.29 E-value=0.092 Score=53.82 Aligned_cols=74 Identities=20% Similarity=0.121 Sum_probs=55.5
Q ss_pred CCCCEEEEECCCcchHHHHHHHcCCCe--EEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGTGILSLFAAQAGASR--VIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~lsl~~a~aGa~~--V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
..+.+|+|+-||.|.+++-+.++|... |+++|+++.+++..+.+. ....++.+|+.++.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~-------------------~~~~~~~~DI~~i~ 74 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH-------------------QGKIMYVGDVRSVT 74 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT-------------------TTCEEEECCGGGCC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC-------------------CCCceeCCChHHcc
Confidence 455799999999999999999999866 799999998875555432 22457889999875
Q ss_pred cccccC-CCcccEEEEe
Q 006731 374 ESMQIQ-PHSVDVLVSE 389 (633)
Q Consensus 374 ~~~~l~-~~~~DvIvse 389 (633)
... ++ .+.+|+|+..
T Consensus 75 ~~~-i~~~~~~Dll~gg 90 (295)
T 2qrv_A 75 QKH-IQEWGPFDLVIGG 90 (295)
T ss_dssp HHH-HHHTCCCSEEEEC
T ss_pred HHH-hcccCCcCEEEec
Confidence 211 21 1369999975
No 349
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.20 E-value=0.013 Score=61.08 Aligned_cols=98 Identities=22% Similarity=0.362 Sum_probs=60.1
Q ss_pred CCCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccc
Q 006731 292 NPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (633)
Q Consensus 292 ~~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~ 369 (633)
...+ +|.+||-+|+|. |.++..+|++ |+++|++++.++..++.+++. . +.+ +...-
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a------------------~~v--~~~~~ 217 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A------------------DRL--VNPLE 217 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C------------------SEE--ECTTT
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H------------------Hhc--cCcCc
Confidence 3456 899999999975 7777777776 877899999998766555432 1 211 21111
Q ss_pred ccccccc-ccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 370 EELGESM-QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 370 e~l~~~~-~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+++.... .+....+|+|+-. .|. ...+....+.|+++|+++.
T Consensus 218 ~~~~~~~~~~~~~g~D~vid~-~g~--------~~~~~~~~~~l~~~G~iv~ 260 (343)
T 2dq4_A 218 EDLLEVVRRVTGSGVEVLLEF-SGN--------EAAIHQGLMALIPGGEARI 260 (343)
T ss_dssp SCHHHHHHHHHSSCEEEEEEC-SCC--------HHHHHHHHHHEEEEEEEEE
T ss_pred cCHHHHHHHhcCCCCCEEEEC-CCC--------HHHHHHHHHHHhcCCEEEE
Confidence 1111000 0113469999852 221 2345566778999999873
No 350
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.19 E-value=0.051 Score=43.08 Aligned_cols=52 Identities=21% Similarity=0.363 Sum_probs=43.2
Q ss_pred CCCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHH
Q 006731 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLH 122 (633)
Q Consensus 44 ~~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~ 122 (633)
..+..|-.|+..|.+...+..||+..++ .....|..|++.|.....|..||+
T Consensus 16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~---------------------------~~~~~C~~C~~~f~~~~~L~~H~~ 67 (77)
T 2cot_A 16 RRRYKCDECGKSFSHSSDLSKHRRTHTG---------------------------EKPYKCDECGKAFIQRSHLIGHHR 67 (77)
T ss_dssp SCSSBCSSSCCBCSCHHHHHHHHTTTCC---------------------------SCSEECSSSCCEESSHHHHHHHGG
T ss_pred CCCEECCCCCcccCCHHHHHHHHHHcCC---------------------------CcCeeCCCCCCccCCHHHHHHHHH
Confidence 3679999999999999999999985432 012469999999999999999995
No 351
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.02 E-value=0.094 Score=54.83 Aligned_cols=91 Identities=13% Similarity=0.223 Sum_probs=56.4
Q ss_pred CEEEEECCCc-chHH-HHHH-Hc-CCCeEEEEeCCHH---HHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 299 AVVMDIGCGT-GILS-LFAA-QA-GASRVIAVEASEK---MAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 299 ~~VLDVGcGt-G~ls-l~~a-~a-Ga~~V~aVD~S~~---~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
.+||-+|+|. |.++ ..+| ++ |+++|++++.++. ..+.+++ .|. +.+ ...-.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa--------------~~v---~~~~~~ 232 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDA--------------TYV---DSRQTP 232 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTC--------------EEE---ETTTSC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCC--------------ccc---CCCccC
Confidence 9999999976 7888 8888 65 8866999999876 5555543 343 112 211111
Q ss_pred cccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 372 LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+.....+ .+.+|+|+- ..|. ...+....+.|+|+|+++.
T Consensus 233 ~~~i~~~-~gg~Dvvid-~~g~--------~~~~~~~~~~l~~~G~iv~ 271 (357)
T 2b5w_A 233 VEDVPDV-YEQMDFIYE-ATGF--------PKHAIQSVQALAPNGVGAL 271 (357)
T ss_dssp GGGHHHH-SCCEEEEEE-CSCC--------HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHh-CCCCCEEEE-CCCC--------hHHHHHHHHHHhcCCEEEE
Confidence 1110012 237999984 2221 2245566788999999873
No 352
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=93.88 E-value=0.043 Score=44.54 Aligned_cols=77 Identities=23% Similarity=0.342 Sum_probs=44.9
Q ss_pred CCceeec--CCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhccc--ccccccCCccCCHHHHHHH
Q 006731 45 SGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNH 120 (633)
Q Consensus 45 ~~~~CLF--C~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~--~~C~~C~~~~~~~~~~~~H 120 (633)
.+..|-+ |+..|.+...+..||+..++=.. .....=+.-|...-.|..-++..... ..|..|+..|.....|..|
T Consensus 3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 81 (90)
T 1a1h_A 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKP-FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 81 (90)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred CceECCCCCCCCccCCHHHHHHHHHHhCCCCC-ccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence 3567774 88888888888888875543110 00000111222222233334433222 3499999999999999999
Q ss_pred HH
Q 006731 121 LH 122 (633)
Q Consensus 121 m~ 122 (633)
|+
T Consensus 82 ~~ 83 (90)
T 1a1h_A 82 TK 83 (90)
T ss_dssp HG
T ss_pred HH
Confidence 96
No 353
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.88 E-value=0.056 Score=46.28 Aligned_cols=80 Identities=25% Similarity=0.314 Sum_probs=50.3
Q ss_pred CCCceeecCCCCCCCHHHHHHHhhhhcC---cchhhhhccccccc--cCceeeehhhHhhcc--cccccccCCccCCHHH
Q 006731 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHC---FDFHSVKTELRLDF--YGSFKLINYIRSQVA--ENRCWICGLTCQSNQD 116 (633)
Q Consensus 44 ~~~~~CLFC~~~~~~~~~~l~Hm~~~H~---Fd~~~~~~~~~ld~--Y~~IKlINyiR~~~~--~~~C~~C~~~~~~~~~ 116 (633)
..+..|-.|++.|.+...+..||+. |+ -........=+-.| ...-.|..-+|.... ...|..||+.|.....
T Consensus 17 ~~~~~C~~C~k~f~~~~~L~~H~~~-~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~ 95 (115)
T 2dmi_A 17 ASKFRCKDCSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQD 95 (115)
T ss_dssp CCSEEBSSSSCEESSHHHHHHHHHH-TCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHH
T ss_pred CCCEECCccCchhcCHHHHHHHHHH-hCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHH
Confidence 3578999999999999999999997 32 11000000001111 222223333333322 2359999999999999
Q ss_pred HHHHHHHh
Q 006731 117 LQNHLHEA 124 (633)
Q Consensus 117 ~~~Hm~~~ 124 (633)
|+.||+..
T Consensus 96 L~~H~~~h 103 (115)
T 2dmi_A 96 LSVHMIKT 103 (115)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99999764
No 354
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.81 E-value=0.027 Score=58.57 Aligned_cols=49 Identities=27% Similarity=0.323 Sum_probs=38.1
Q ss_pred HHhCCCCCCCCEEEEECCCc--chHHHHHHHc-CCCeEEEEeCCHHHHHHHHH
Q 006731 289 ILENPSLMKGAVVMDIGCGT--GILSLFAAQA-GASRVIAVEASEKMAAVATQ 338 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcGt--G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~ 338 (633)
+.+...+.+|++||-+|+|. |.++..++++ |+ +|++++.++..++.+++
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLR 187 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHH
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 33445678899999999984 6677777765 88 99999999877766665
No 355
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.80 E-value=0.053 Score=56.59 Aligned_cols=71 Identities=15% Similarity=0.217 Sum_probs=53.3
Q ss_pred CEEEEECCCcchHHHHHHHcCC--CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 299 AVVMDIGCGTGILSLFAAQAGA--SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 299 ~~VLDVGcGtG~lsl~~a~aGa--~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
-+|+|+-||.|.+++-+.++|. +.|.|+|+++.+++..+.+. ....++.+|+.++...
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~-------------------~~~~~~~~DI~~~~~~- 63 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF-------------------PETNLLNRNIQQLTPQ- 63 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC-------------------TTSCEECCCGGGCCHH-
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC-------------------CCCceeccccccCCHH-
Confidence 4799999999999999999996 67899999998876665543 2234678899887521
Q ss_pred ccCCCcccEEEEe
Q 006731 377 QIQPHSVDVLVSE 389 (633)
Q Consensus 377 ~l~~~~~DvIvse 389 (633)
.++...+|+|+..
T Consensus 64 ~~~~~~~D~l~gg 76 (333)
T 4h0n_A 64 VIKKWNVDTILMS 76 (333)
T ss_dssp HHHHTTCCEEEEC
T ss_pred HhccCCCCEEEec
Confidence 1232369999964
No 356
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.74 E-value=0.077 Score=50.29 Aligned_cols=101 Identities=19% Similarity=0.262 Sum_probs=58.0
Q ss_pred HHhCCCCCCCCEEEEECCC--cchHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 289 ILENPSLMKGAVVMDIGCG--TGILSLFAAQ-AGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcG--tG~lsl~~a~-aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
+.+...+.++++||.+|++ .|.....+++ .|+ +|++++.++...+.++ ..|. .. ++
T Consensus 30 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~----~~g~--------------~~--~~ 88 (198)
T 1pqw_A 30 LCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS----RLGV--------------EY--VG 88 (198)
T ss_dssp HHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH----TTCC--------------SE--EE
T ss_pred HHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH----HcCC--------------CE--Ee
Confidence 3344457789999999953 3555444444 487 8999999987665443 2333 21 12
Q ss_pred Eccccccccc-cc-cCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 QGMVEELGES-MQ-IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 ~gd~e~l~~~-~~-l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
...-.+.... .. .....+|+||... | . ..+....+.|+|||+++.
T Consensus 89 d~~~~~~~~~~~~~~~~~~~D~vi~~~-g-----~----~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 89 DSRSVDFADEILELTDGYGVDVVLNSL-A-----G----EAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp ETTCSTHHHHHHHHTTTCCEEEEEECC-C-----T----HHHHHHHHTEEEEEEEEE
T ss_pred eCCcHHHHHHHHHHhCCCCCeEEEECC-c-----h----HHHHHHHHHhccCCEEEE
Confidence 2111111000 00 1124699999532 2 1 245566789999999883
No 357
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.69 E-value=0.039 Score=56.99 Aligned_cols=101 Identities=19% Similarity=0.257 Sum_probs=62.5
Q ss_pred HHhCCCCCCCCEEEEEC-CCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 289 ILENPSLMKGAVVMDIG-CGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVG-cGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
+.....+.+|++||-+| +|. |.++..++++ |+ +|++++.++.-++.+++. |. + .++
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----Ga--------------~--~~~ 190 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKAL----GA--------------W--ETI 190 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----TC--------------S--EEE
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CC--------------C--EEE
Confidence 34445678899999999 443 7777777775 88 899999999877776643 32 2 122
Q ss_pred Ecccccccccc--ccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 QGMVEELGESM--QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 ~gd~e~l~~~~--~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
...-.++.... ......+|+|+.. .|. ..+....+.|+++|+++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~g~Dvvid~-~g~---------~~~~~~~~~l~~~G~iv~ 237 (325)
T 3jyn_A 191 DYSHEDVAKRVLELTDGKKCPVVYDG-VGQ---------DTWLTSLDSVAPRGLVVS 237 (325)
T ss_dssp ETTTSCHHHHHHHHTTTCCEEEEEES-SCG---------GGHHHHHTTEEEEEEEEE
T ss_pred eCCCccHHHHHHHHhCCCCceEEEEC-CCh---------HHHHHHHHHhcCCCEEEE
Confidence 22212211000 0123579999853 221 134456689999999884
No 358
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.68 E-value=0.11 Score=53.72 Aligned_cols=98 Identities=18% Similarity=0.178 Sum_probs=61.5
Q ss_pred CCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
...+|.+||-.|+|. |.++..+|++ |+..|++++.++.-++.|++ .|.. .++...-.+
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~----------------~~i~~~~~~ 216 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAM----------------QTFNSSEMS 216 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS----------------EEEETTTSC
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCe----------------EEEeCCCCC
Confidence 467899999999987 6777777776 88889999999987766654 3432 223222111
Q ss_pred cccc-ccc-CCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 372 LGES-MQI-QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 372 l~~~-~~l-~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
.... ..+ ....+|+|+- ..|. ...+....++|++||.++.
T Consensus 217 ~~~~~~~~~~~~g~d~v~d-~~G~--------~~~~~~~~~~l~~~G~~v~ 258 (346)
T 4a2c_A 217 APQMQSVLRELRFNQLILE-TAGV--------PQTVELAVEIAGPHAQLAL 258 (346)
T ss_dssp HHHHHHHHGGGCSSEEEEE-CSCS--------HHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHhhcccCCcccccc-cccc--------cchhhhhhheecCCeEEEE
Confidence 1100 001 1245788774 2221 2345566688999999873
No 359
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.67 E-value=0.19 Score=51.55 Aligned_cols=93 Identities=23% Similarity=0.266 Sum_probs=58.7
Q ss_pred hCCCCCCCCEEEEEC-CCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc
Q 006731 291 ENPSLMKGAVVMDIG-CGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (633)
Q Consensus 291 ~~~~~~~~~~VLDVG-cGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g 367 (633)
+...+.+|.+||-+| +|. |.++..+|++ |+ +|+++. ++.-.+.+++ .|.. .++..
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~----lGa~----------------~~i~~ 203 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKA----LGAE----------------QCINY 203 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHH----HTCS----------------EEEET
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHH----cCCC----------------EEEeC
Confidence 334678899999997 675 8888888887 88 899997 4443445443 3442 23333
Q ss_pred cccc-cccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 368 MVEE-LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 368 d~e~-l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
.-.+ +.. ....+|+|+- ..|. +.+ ....+.|+++|+++
T Consensus 204 ~~~~~~~~----~~~g~D~v~d-~~g~--------~~~-~~~~~~l~~~G~iv 242 (321)
T 3tqh_A 204 HEEDFLLA----ISTPVDAVID-LVGG--------DVG-IQSIDCLKETGCIV 242 (321)
T ss_dssp TTSCHHHH----CCSCEEEEEE-SSCH--------HHH-HHHGGGEEEEEEEE
T ss_pred CCcchhhh----hccCCCEEEE-CCCc--------HHH-HHHHHhccCCCEEE
Confidence 2222 221 1257999984 2221 222 56678999999988
No 360
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.63 E-value=0.31 Score=43.53 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=57.3
Q ss_pred CCEEEEECCCc-c-hHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 298 GAVVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 298 ~~~VLDVGcGt-G-~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
..+|+-+|+|. | .++..+.+.|. .|+++|.++..++.+++ ..+.++.||..+...-
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~---------------------~g~~~i~gd~~~~~~l 64 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRE---------------------RGVRAVLGNAANEEIM 64 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH---------------------TTCEEEESCTTSHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH---------------------cCCCEEECCCCCHHHH
Confidence 35799999986 5 35556666687 89999999987765543 2356788888664311
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
.......+|+||.-. ........+-...+.+.|+..++
T Consensus 65 ~~a~i~~ad~vi~~~------~~~~~n~~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 65 QLAHLECAKWLILTI------PNGYEAGEIVASARAKNPDIEII 102 (140)
T ss_dssp HHTTGGGCSEEEECC------SCHHHHHHHHHHHHHHCSSSEEE
T ss_pred HhcCcccCCEEEEEC------CChHHHHHHHHHHHHHCCCCeEE
Confidence 112236799998632 11111222233445567777665
No 361
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.56 E-value=0.16 Score=52.36 Aligned_cols=101 Identities=19% Similarity=0.232 Sum_probs=61.5
Q ss_pred HHhCCCCCCCCEEEEECC-Cc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 289 ILENPSLMKGAVVMDIGC-GT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGc-Gt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
+.+...+.+|++||-+|+ |. |.++..++++ |+ +|++++.++..++.+++ .|. + .++
T Consensus 140 l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga--------------~--~~~ 198 (334)
T 3qwb_A 140 TNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKE----YGA--------------E--YLI 198 (334)
T ss_dssp HHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTC--------------S--EEE
T ss_pred HHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCC--------------c--EEE
Confidence 344446788999999994 43 6777777775 88 89999999887766554 343 2 123
Q ss_pred Ecccccccccc-c-cCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 QGMVEELGESM-Q-IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 ~gd~e~l~~~~-~-l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
...-.++.... . .....+|+|+.. .|. ..+....+.|+|+|+++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~g~D~vid~-~g~---------~~~~~~~~~l~~~G~iv~ 245 (334)
T 3qwb_A 199 NASKEDILRQVLKFTNGKGVDASFDS-VGK---------DTFEISLAALKRKGVFVS 245 (334)
T ss_dssp ETTTSCHHHHHHHHTTTSCEEEEEEC-CGG---------GGHHHHHHHEEEEEEEEE
T ss_pred eCCCchHHHHHHHHhCCCCceEEEEC-CCh---------HHHHHHHHHhccCCEEEE
Confidence 22222211000 0 123579999853 221 134455678999999884
No 362
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.56 E-value=0.13 Score=53.15 Aligned_cols=68 Identities=15% Similarity=0.193 Sum_probs=53.2
Q ss_pred CEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccccc
Q 006731 299 AVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQI 378 (633)
Q Consensus 299 ~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~l 378 (633)
.+|||+=||.|.+++-+.++|..-|.|+|+++.+++.-+.+. + . +++.+|+.++... .+
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~-----~-------------~--~~~~~DI~~i~~~-~~ 59 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH-----S-------------A--KLIKGDISKISSD-EF 59 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC-----C-------------S--EEEESCGGGCCGG-GS
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC-----C-------------C--CcccCChhhCCHh-hC
Confidence 379999999999999999999988999999998775555432 1 2 5688999988632 13
Q ss_pred CCCcccEEEEe
Q 006731 379 QPHSVDVLVSE 389 (633)
Q Consensus 379 ~~~~~DvIvse 389 (633)
..+|+|+..
T Consensus 60 --~~~D~l~gg 68 (331)
T 3ubt_Y 60 --PKCDGIIGG 68 (331)
T ss_dssp --CCCSEEECC
T ss_pred --CcccEEEec
Confidence 479999964
No 363
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.52 E-value=0.14 Score=53.56 Aligned_cols=97 Identities=20% Similarity=0.246 Sum_probs=60.7
Q ss_pred CCCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccc
Q 006731 293 PSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (633)
Q Consensus 293 ~~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e 370 (633)
..+.+|.+||-+|+|. |.++..+|++ |+ +|++++.++..++.+++. |. +. ++...-.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l----Ga--------------~~--v~~~~~~ 233 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM----GA--------------DH--YIATLEE 233 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH----TC--------------SE--EEEGGGT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc----CC--------------CE--EEcCcCc
Confidence 3567899999999976 7888888876 88 799999988777666652 33 22 2322211
Q ss_pred -ccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 371 -ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 371 -~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
++... +. +.+|+|+-. .+.. .. ..+....+.|++||+++.
T Consensus 234 ~~~~~~--~~-~~~D~vid~-~g~~--~~----~~~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 234 GDWGEK--YF-DTFDLIVVC-ASSL--TD----IDFNIMPKAMKVGGRIVS 274 (360)
T ss_dssp SCHHHH--SC-SCEEEEEEC-CSCS--TT----CCTTTGGGGEEEEEEEEE
T ss_pred hHHHHH--hh-cCCCEEEEC-CCCC--cH----HHHHHHHHHhcCCCEEEE
Confidence 22111 22 479999853 2220 00 123345678999999873
No 364
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.51 E-value=0.071 Score=55.50 Aligned_cols=72 Identities=14% Similarity=0.113 Sum_probs=54.0
Q ss_pred CCEEEEECCCcchHHHHHHHcCC--CeE-EEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 298 GAVVMDIGCGTGILSLFAAQAGA--SRV-IAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 298 ~~~VLDVGcGtG~lsl~~a~aGa--~~V-~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
.-+|+|+-||.|.+++-+.++|. ..| .|+|+++.+++..+.+.. .. ++.+|+.++..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~------------------~~--~~~~DI~~~~~ 69 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFK------------------EE--VQVKNLDSISI 69 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHC------------------CC--CBCCCTTTCCH
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCC------------------CC--cccCChhhcCH
Confidence 45899999999999999999984 677 899999988877766642 22 56788887752
Q ss_pred ccccCCCcccEEEEec
Q 006731 375 SMQIQPHSVDVLVSEW 390 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~ 390 (633)
. .++...+|+|+..+
T Consensus 70 ~-~i~~~~~Dil~ggp 84 (327)
T 3qv2_A 70 K-QIESLNCNTWFMSP 84 (327)
T ss_dssp H-HHHHTCCCEEEECC
T ss_pred H-HhccCCCCEEEecC
Confidence 1 13323699999653
No 365
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.49 E-value=0.13 Score=53.46 Aligned_cols=96 Identities=21% Similarity=0.213 Sum_probs=59.3
Q ss_pred CCCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
.+.+|++||-+|+|. |.++..++++ |+ +|++++.++..++.+++ .|. +. ++...-.+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa--------------~~--~~d~~~~~ 219 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKE----LGA--------------DL--VVNPLKED 219 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTC--------------SE--EECTTTSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----CCC--------------CE--EecCCCcc
Confidence 467899999999975 7777777765 88 99999999887766653 343 21 12111111
Q ss_pred cccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 372 LGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 372 l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+... .... +.+|+|+.. .|. ...+....+.|+++|+++.
T Consensus 220 ~~~~~~~~~-~~~d~vid~-~g~--------~~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 220 AAKFMKEKV-GGVHAAVVT-AVS--------KPAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp HHHHHHHHH-SSEEEEEES-SCC--------HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHh-CCCCEEEEC-CCC--------HHHHHHHHHHhhcCCEEEE
Confidence 1100 0011 469999853 221 2345566678999999873
No 366
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.48 E-value=0.13 Score=53.24 Aligned_cols=103 Identities=19% Similarity=0.254 Sum_probs=62.6
Q ss_pred HHHhCCCCCCCCEEEEECC-C-cchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 288 AILENPSLMKGAVVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGc-G-tG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
++.+...+.+|++||-.|+ | .|.++..++++ |+ +|++++.++...+.+. +..|.. .+
T Consensus 140 al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~---~~~g~~----------------~~ 199 (336)
T 4b7c_A 140 ALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLV---EELGFD----------------GA 199 (336)
T ss_dssp HHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH---HTTCCS----------------EE
T ss_pred HHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH---HHcCCC----------------EE
Confidence 3444556788999999999 3 36777766665 88 9999999987665552 233431 12
Q ss_pred EEccccccccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 365 VQGMVEELGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 365 i~gd~e~l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+...-.++... .....+.+|+|+.. .|. ..+....+.|+++|+++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vi~~-~g~---------~~~~~~~~~l~~~G~iv~ 246 (336)
T 4b7c_A 200 IDYKNEDLAAGLKRECPKGIDVFFDN-VGG---------EILDTVLTRIAFKARIVL 246 (336)
T ss_dssp EETTTSCHHHHHHHHCTTCEEEEEES-SCH---------HHHHHHHTTEEEEEEEEE
T ss_pred EECCCHHHHHHHHHhcCCCceEEEEC-CCc---------chHHHHHHHHhhCCEEEE
Confidence 22211221100 00113579999852 221 245667789999999883
No 367
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.46 E-value=0.044 Score=46.00 Aligned_cols=54 Identities=17% Similarity=0.284 Sum_probs=44.3
Q ss_pred CCceeecCCCCCC-CHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHH
Q 006731 45 SGFLCLFCDAGYS-SCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (633)
Q Consensus 45 ~~~~CLFC~~~~~-~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~ 123 (633)
.+..|-.|++.|. ....+..||+..|+-. ....|..|++.|.....|+.||+.
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~--------------------------~~~~C~~C~k~F~~~~~L~~H~~~ 76 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHMEVCQKLQ--------------------------DALKCQHCRKQFKSKAGLNYHTMA 76 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHHHHHHHHH--------------------------HHHSCSSSCCCCSCHHHHHHHHHH
T ss_pred CCcCCCCCCCChhhhHHHHHHHHHHHcCCC--------------------------CCEECCCCCCccCCHHHHHHHHHH
Confidence 5789999999999 9999999998655310 113699999999999999999975
Q ss_pred h
Q 006731 124 A 124 (633)
Q Consensus 124 ~ 124 (633)
.
T Consensus 77 h 77 (98)
T 2gqj_A 77 E 77 (98)
T ss_dssp H
T ss_pred H
Confidence 3
No 368
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=93.44 E-value=0.072 Score=44.12 Aligned_cols=79 Identities=18% Similarity=0.258 Sum_probs=50.2
Q ss_pred CCCceeec--CCCCCCCHHHHHHHhhhhcCcchhhhh-ccccccccCceeeehhhHhhccc--ccccccCCccCCHHHHH
Q 006731 44 ESGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVK-TELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQ 118 (633)
Q Consensus 44 ~~~~~CLF--C~~~~~~~~~~l~Hm~~~H~Fd~~~~~-~~~~ld~Y~~IKlINyiR~~~~~--~~C~~C~~~~~~~~~~~ 118 (633)
..+..|-+ |+..|.+...+..||+..++--..... ..=+.-|...-.|..-+|..... ..|..|++.|.....|.
T Consensus 13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~ 92 (100)
T 2ebt_A 13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA 92 (100)
T ss_dssp CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence 45789998 999999999999999976542111110 00112222222233444443332 34999999999888999
Q ss_pred HHHH
Q 006731 119 NHLH 122 (633)
Q Consensus 119 ~Hm~ 122 (633)
.||+
T Consensus 93 ~H~~ 96 (100)
T 2ebt_A 93 LHMK 96 (100)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9986
No 369
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=93.41 E-value=0.26 Score=50.64 Aligned_cols=110 Identities=11% Similarity=0.099 Sum_probs=64.5
Q ss_pred CCEEEEECCCcchHHHHHHH----cCC-C--eEEEEeCCH---------HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 006731 298 GAVVMDIGCGTGILSLFAAQ----AGA-S--RVIAVEASE---------KMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (633)
Q Consensus 298 ~~~VLDVGcGtG~lsl~~a~----aGa-~--~V~aVD~S~---------~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~ 361 (633)
.-+|||+|=|||+..+.+.+ .+. . +++++|..+ ...+..+........ .....-.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~---------~~~~~v~ 167 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPE---------YEGERLS 167 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSE---------EECSSEE
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCcc---------ccCCcEE
Confidence 46899999999985543332 232 2 567788532 111122222221100 0001124
Q ss_pred EEEEEccccccccccccCCCcccEEEEecccccccChhhH-HHHHHHHhhcccCCcEEE
Q 006731 362 MEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESML-SSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 362 I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l-~~vl~a~~r~LkpgG~li 419 (633)
++++.||+.+.-.. ++..+||+|+...+...- ...|+ ..++.++.++++|||++.
T Consensus 168 L~l~~GDa~~~l~~--l~~~~~Da~flDgFsP~k-NPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 168 LKVLLGDARKRIKE--VENFKADAVFHDAFSPYK-NPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp EEEEESCHHHHGGG--CCSCCEEEEEECCSCTTT-SGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred EEEEechHHHHHhh--hcccceeEEEeCCCCccc-CcccCCHHHHHHHHHHhCCCcEEE
Confidence 67888999775422 344589999986654332 22333 578999999999999987
No 370
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.33 E-value=0.12 Score=53.68 Aligned_cols=95 Identities=17% Similarity=0.235 Sum_probs=59.5
Q ss_pred CCCCCCEEEEECCCc-chHHHHHHHc---CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccc
Q 006731 294 SLMKGAVVMDIGCGT-GILSLFAAQA---GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (633)
Q Consensus 294 ~~~~~~~VLDVGcGt-G~lsl~~a~a---Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~ 369 (633)
.+ +|.+||-+|+|. |.++..+|++ |+ +|++++.++...+.+++. |. +. ++...-
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga--------------~~--vi~~~~ 225 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALEL----GA--------------DY--VSEMKD 225 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHH----TC--------------SE--EECHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHh----CC--------------CE--Eecccc
Confidence 45 899999999986 7777777764 77 799999999877777653 33 22 221111
Q ss_pred -cccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 370 -EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 370 -e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
.++.... .....+|+|+-. .|. ...+....+.|+|+|.++.
T Consensus 226 ~~~~~~~~-~~g~g~D~vid~-~g~--------~~~~~~~~~~l~~~G~iv~ 267 (344)
T 2h6e_A 226 AESLINKL-TDGLGASIAIDL-VGT--------EETTYNLGKLLAQEGAIIL 267 (344)
T ss_dssp HHHHHHHH-HTTCCEEEEEES-SCC--------HHHHHHHHHHEEEEEEEEE
T ss_pred chHHHHHh-hcCCCccEEEEC-CCC--------hHHHHHHHHHhhcCCEEEE
Confidence 1111000 112379999852 221 2245566788999999873
No 371
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.32 E-value=0.051 Score=46.14 Aligned_cols=78 Identities=12% Similarity=0.204 Sum_probs=50.4
Q ss_pred CCCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhccc--ccccccCCccCCHHHHHHHH
Q 006731 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNHL 121 (633)
Q Consensus 44 ~~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~--~~C~~C~~~~~~~~~~~~Hm 121 (633)
..+..| .|+..|.+...+..||+..++--... ...=+.-|...-.|..-+|..... ..|..|++.|.....|..||
T Consensus 8 ~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~-C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~ 85 (110)
T 2csh_A 8 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYG-CGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV 85 (110)
T ss_dssp CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEE-CTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHH
T ss_pred CCCEec-cCCCccCCHHHHHHHHHHcCCCcCcc-CCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHH
Confidence 357899 89999999999999999766421100 011112222222344444433322 34999999999999999999
Q ss_pred HH
Q 006731 122 HE 123 (633)
Q Consensus 122 ~~ 123 (633)
+.
T Consensus 86 ~~ 87 (110)
T 2csh_A 86 TS 87 (110)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 372
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.30 E-value=0.088 Score=45.32 Aligned_cols=27 Identities=30% Similarity=0.301 Sum_probs=16.6
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcC
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHC 71 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~ 71 (633)
.+..|-.|+..|.+...+..||+..++
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~ 32 (124)
T 2dlq_A 6 SGVECPTCHKKFLSKYYLKVHNRKHTG 32 (124)
T ss_dssp SSCCCTTTCCCCSSHHHHHHHHHHHSS
T ss_pred CCCCCCCCCCcCCCHHHHHHHHHhCCC
Confidence 345666666666666666666665443
No 373
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.28 E-value=0.08 Score=42.47 Aligned_cols=57 Identities=23% Similarity=0.384 Sum_probs=45.9
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~~ 124 (633)
.+..|-.|+..|.+...+..||+..|+-... .....|..|++.|.....|..||+..
T Consensus 14 k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~-----------------------~~~~~C~~C~~~f~~~~~L~~H~~~h 70 (86)
T 1x6h_A 14 KPYACSHCDKTFRQKQLLDMHFKRYHDPNFV-----------------------PAAFVCSKCGKTFTRRNTMARHADNC 70 (86)
T ss_dssp CCEECSSSSCEESSHHHHHHHHHHTTCSSCC-----------------------CCCEECSSSCCEESCHHHHHHHHHHC
T ss_pred CCCcCCCCCCccCCHHHHHHHHHHhcCCcCC-----------------------CcceECCCCCChhCCHHHHHHHHHHc
Confidence 5789999999999999999999987753210 01246999999999999999999753
No 374
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.17 E-value=0.17 Score=52.47 Aligned_cols=101 Identities=23% Similarity=0.292 Sum_probs=63.4
Q ss_pred HHHhCCCCCCCCEEEEECC-C-cchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 288 AILENPSLMKGAVVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGc-G-tG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
++.+...+.+|++||-.|+ | .|.++..++++ |+ +|++++.++...+.+++. |. +. +
T Consensus 150 ~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----ga--------------~~--v 208 (342)
T 4eye_A 150 AYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSV----GA--------------DI--V 208 (342)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH----TC--------------SE--E
T ss_pred HHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CC--------------cE--E
Confidence 4445556788999999998 4 37777777776 88 999999998777666653 33 22 2
Q ss_pred EEcccccccccc-c-cCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 365 VQGMVEELGESM-Q-IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 365 i~gd~e~l~~~~-~-l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+..+ .++.... . .....+|+|+-. .|. . .+....+.|+++|+++.
T Consensus 209 ~~~~-~~~~~~v~~~~~~~g~Dvvid~-~g~-----~----~~~~~~~~l~~~G~iv~ 255 (342)
T 4eye_A 209 LPLE-EGWAKAVREATGGAGVDMVVDP-IGG-----P----AFDDAVRTLASEGRLLV 255 (342)
T ss_dssp EESS-TTHHHHHHHHTTTSCEEEEEES-CC-----------CHHHHHHTEEEEEEEEE
T ss_pred ecCc-hhHHHHHHHHhCCCCceEEEEC-Cch-----h----HHHHHHHhhcCCCEEEE
Confidence 3322 2221100 0 123479999853 221 1 34556678999999884
No 375
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=93.17 E-value=0.097 Score=47.29 Aligned_cols=80 Identities=23% Similarity=0.311 Sum_probs=51.7
Q ss_pred CCCCceeecCCCCCCCHHHHHHHhhhhcCcchhh--------hhccccccccCceeeehhhHhhccc--ccccc--cCCc
Q 006731 43 LESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHS--------VKTELRLDFYGSFKLINYIRSQVAE--NRCWI--CGLT 110 (633)
Q Consensus 43 ~~~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~--------~~~~~~ld~Y~~IKlINyiR~~~~~--~~C~~--C~~~ 110 (633)
+..+..|-.|+..|.+...+..||+..|.-.-.. ....=+.-|...-.|..-+|..... ..|.. |++.
T Consensus 22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~ 101 (155)
T 2rpc_A 22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI 101 (155)
T ss_dssp TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence 3467899999999999999999999888753221 0111122232323344444443322 34887 8888
Q ss_pred cCCHHHHHHHHH
Q 006731 111 CQSNQDLQNHLH 122 (633)
Q Consensus 111 ~~~~~~~~~Hm~ 122 (633)
|.....|..||+
T Consensus 102 f~~~~~L~~H~~ 113 (155)
T 2rpc_A 102 FARSENLKIHKR 113 (155)
T ss_dssp ESCHHHHHHHHT
T ss_pred cCCHHHHHHHHH
Confidence 888888888885
No 376
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.17 E-value=0.13 Score=53.05 Aligned_cols=101 Identities=21% Similarity=0.217 Sum_probs=59.0
Q ss_pred HHhCCCCCCCCEEEEECCC--cchHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 289 ILENPSLMKGAVVMDIGCG--TGILSLFAAQ-AGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcG--tG~lsl~~a~-aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
+.+...+.++++||..|++ .|.....+++ .|+ +|++++.++..++.+++ .|. . . ++
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~--------------~-~-~~ 195 (333)
T 1v3u_A 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQ----IGF--------------D-A-AF 195 (333)
T ss_dssp HHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTC--------------S-E-EE
T ss_pred HHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCC--------------c-E-EE
Confidence 3344567789999999983 3555555555 488 99999999877665532 232 1 1 12
Q ss_pred Eccc-ccccccc-ccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 QGMV-EELGESM-QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 ~gd~-e~l~~~~-~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
...- .++.... ....+.+|++|... |. ..+....+.|++||+++.
T Consensus 196 d~~~~~~~~~~~~~~~~~~~d~vi~~~-g~---------~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 196 NYKTVNSLEEALKKASPDGYDCYFDNV-GG---------EFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp ETTSCSCHHHHHHHHCTTCEEEEEESS-CH---------HHHHHHHTTEEEEEEEEE
T ss_pred ecCCHHHHHHHHHHHhCCCCeEEEECC-Ch---------HHHHHHHHHHhcCCEEEE
Confidence 1111 1111000 01124799998532 21 135566788999999873
No 377
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=92.94 E-value=0.059 Score=43.58 Aligned_cols=78 Identities=18% Similarity=0.265 Sum_probs=46.6
Q ss_pred CCceeec--CCCCCCCHHHHHHHhhhhcCcchhhhh-ccccccccCceeeehhhHhhccc--ccccccCCccCCHHHHHH
Q 006731 45 SGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVK-TELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQN 119 (633)
Q Consensus 45 ~~~~CLF--C~~~~~~~~~~l~Hm~~~H~Fd~~~~~-~~~~ld~Y~~IKlINyiR~~~~~--~~C~~C~~~~~~~~~~~~ 119 (633)
.+..|-+ |+..|.+...+..||+..++-...... ..=+.-|...-.|..-++..... ..|..||+.|.....|..
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~ 83 (89)
T 2wbs_A 4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL 83 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence 4678999 999999999999999865542110000 00111222222233334433332 348888888888888888
Q ss_pred HHH
Q 006731 120 HLH 122 (633)
Q Consensus 120 Hm~ 122 (633)
||+
T Consensus 84 H~~ 86 (89)
T 2wbs_A 84 HMK 86 (89)
T ss_dssp HGG
T ss_pred HHH
Confidence 875
No 378
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=92.85 E-value=0.062 Score=41.31 Aligned_cols=51 Identities=27% Similarity=0.580 Sum_probs=42.2
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHH
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLH 122 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~ 122 (633)
-|..|-.|++.|.....+..||+. |. + .....|..||+.|.....|..||+
T Consensus 3 Kpy~C~~C~k~F~~~~~L~~H~~~-Ht----------~----------------ekp~~C~~C~k~F~~~~~L~~H~~ 53 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLSRHRRA-HL----------G----------------YRPRSCPECGKCFRDQSEVNRHLK 53 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH-HH----------T----------------CCCEECTTTCCEESSHHHHHHHGG
T ss_pred CCccCCCCCCEeCCHHHHHHHHHH-hC----------C----------------CcCeECCCCCCCcCCHHHHHHHhC
Confidence 578999999999999999999984 31 1 012359999999999999999996
No 379
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.66 E-value=0.11 Score=44.69 Aligned_cols=80 Identities=21% Similarity=0.280 Sum_probs=44.5
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcC--cchhhhhccccccccCceeeehhhHhhccc--ccccccCCccCCHHHHHHH
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHC--FDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNH 120 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~--Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~--~~C~~C~~~~~~~~~~~~H 120 (633)
.+..|-.|+..|.+...+..|+...|. -.-......=+.-|-..-.|..-+|..... ..|..|++.|.....|+.|
T Consensus 34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 113 (124)
T 2dlq_A 34 KPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113 (124)
T ss_dssp CSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHH
T ss_pred CCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHH
Confidence 578999999999999999999987531 110000000011122222233333333222 2377777777666677777
Q ss_pred HHHh
Q 006731 121 LHEA 124 (633)
Q Consensus 121 m~~~ 124 (633)
|...
T Consensus 114 ~~~~ 117 (124)
T 2dlq_A 114 MIKL 117 (124)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6543
No 380
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.55 E-value=0.26 Score=53.33 Aligned_cols=45 Identities=29% Similarity=0.341 Sum_probs=36.4
Q ss_pred CCCCCCCEEEEECC-Cc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHH
Q 006731 293 PSLMKGAVVMDIGC-GT-GILSLFAAQA-GASRVIAVEASEKMAAVATQ 338 (633)
Q Consensus 293 ~~~~~~~~VLDVGc-Gt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~ 338 (633)
..+.+|.+||-+|+ |. |.++..+|++ |+ +|++++.++.-++.+++
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRA 271 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHh
Confidence 45678999999998 54 7888888886 77 89999999887777654
No 381
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=92.53 E-value=0.091 Score=40.96 Aligned_cols=52 Identities=25% Similarity=0.503 Sum_probs=42.3
Q ss_pred CCCceeec--CCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHH
Q 006731 44 ESGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHL 121 (633)
Q Consensus 44 ~~~~~CLF--C~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm 121 (633)
..+..|-+ |++.|.+...+..||+..++- ....|..||+.|.....|..||
T Consensus 17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~---------------------------~~~~C~~C~~~f~~~~~l~~H~ 69 (73)
T 1f2i_G 17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQ---------------------------KPFQCRICMRNFSRSDHLTTHI 69 (73)
T ss_dssp CCCEECSSTTBCCEESSHHHHHHHHHHHHCC---------------------------CCEECTTTCCEESCHHHHHHHH
T ss_pred CCccCCcCCCCCCccCCHHHHHHHHHhhCCC---------------------------CCeECCCCCchhCCHHHHHHHH
Confidence 35789986 999999999999999864330 1135999999999999999998
Q ss_pred H
Q 006731 122 H 122 (633)
Q Consensus 122 ~ 122 (633)
+
T Consensus 70 ~ 70 (73)
T 1f2i_G 70 R 70 (73)
T ss_dssp T
T ss_pred H
Confidence 5
No 382
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=92.27 E-value=0.13 Score=42.45 Aligned_cols=53 Identities=26% Similarity=0.444 Sum_probs=43.9
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~~ 124 (633)
.+-+|-.|++.|.+...+..||+..|+- | ...|..|++.|.....|..||...
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~-----------------k----------~~~C~~C~k~F~~~~~L~~H~~~~ 79 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRLLHAA-----------------Q----------VFPCKYCPATFYSSPGLTRHINKC 79 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHTTSCS-----------------S----------SEECTTSSCEESSHHHHHHHHHTT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhhccCC-----------------C----------ccCCCCCCCEeCCHHHHHHhCccc
Confidence 4679999999999999999999876531 0 135999999999999999999654
No 383
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.06 E-value=0.52 Score=48.19 Aligned_cols=89 Identities=20% Similarity=0.274 Sum_probs=57.0
Q ss_pred CCEEEEECC-Cc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 298 GAVVMDIGC-GT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 298 ~~~VLDVGc-Gt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
+. ||-.|+ |. |.++..+|++ |+ +|++++.++.-.+.+++. |. +. ++.. .+...
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga--------------~~--vi~~--~~~~~ 203 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSL----GA--------------NR--ILSR--DEFAE 203 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH----TC--------------SE--EEEG--GGSSC
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CC--------------CE--EEec--CCHHH
Confidence 45 999998 54 8888888887 88 999999998877777653 33 21 1211 11110
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
...+..+.+|+|+- ..|. ..+....+.|+|+|+++.
T Consensus 204 ~~~~~~~~~d~v~d-~~g~---------~~~~~~~~~l~~~G~iv~ 239 (324)
T 3nx4_A 204 SRPLEKQLWAGAID-TVGD---------KVLAKVLAQMNYGGCVAA 239 (324)
T ss_dssp CCSSCCCCEEEEEE-SSCH---------HHHHHHHHTEEEEEEEEE
T ss_pred HHhhcCCCccEEEE-CCCc---------HHHHHHHHHHhcCCEEEE
Confidence 11123467999874 2221 155667789999999883
No 384
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.99 E-value=0.18 Score=52.86 Aligned_cols=96 Identities=21% Similarity=0.277 Sum_probs=59.6
Q ss_pred CCCCCCCEEEEEC-CC-cchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccc
Q 006731 293 PSLMKGAVVMDIG-CG-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (633)
Q Consensus 293 ~~~~~~~~VLDVG-cG-tG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~ 369 (633)
..+.+|++||-+| +| .|.++..++++ |+ +|++++.++..++.+++ .|. + .++..+-
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga--------------~--~~~~~~~ 217 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS----LGC--------------D--RPINYKT 217 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTC--------------S--EEEETTT
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH----cCC--------------c--EEEecCC
Confidence 3567899999999 34 47777777775 88 89999999877666654 343 2 1222221
Q ss_pred ccccccc-ccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 370 EELGESM-QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 370 e~l~~~~-~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
.++.... ......+|+|+-. .|. ..+....+.|+++|.++
T Consensus 218 ~~~~~~~~~~~~~g~D~vid~-~g~---------~~~~~~~~~l~~~G~iv 258 (362)
T 2c0c_A 218 EPVGTVLKQEYPEGVDVVYES-VGG---------AMFDLAVDALATKGRLI 258 (362)
T ss_dssp SCHHHHHHHHCTTCEEEEEEC-SCT---------HHHHHHHHHEEEEEEEE
T ss_pred hhHHHHHHHhcCCCCCEEEEC-CCH---------HHHHHHHHHHhcCCEEE
Confidence 2211000 0113579999853 221 24556678899999887
No 385
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.98 E-value=0.15 Score=52.82 Aligned_cols=50 Identities=22% Similarity=0.231 Sum_probs=44.6
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCC
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDF 345 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl 345 (633)
..+|..|||.-||+|..+..+.+.|. +.+|+|+++..++.|+++++..+.
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSCS
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhccc
Confidence 36789999999999999999999986 999999999999999998876553
No 386
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=91.97 E-value=0.12 Score=42.02 Aligned_cols=27 Identities=30% Similarity=0.514 Sum_probs=22.9
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcC
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHC 71 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~ 71 (633)
.+..|-.|+..|.+...+..||+..++
T Consensus 2 k~~~C~~C~k~f~~~~~L~~H~~~H~~ 28 (88)
T 1llm_C 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28 (88)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CCCcCCCCCCccCCHHHHHHHHHHcCC
Confidence 467899999999999999999986543
No 387
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=91.85 E-value=0.11 Score=53.73 Aligned_cols=100 Identities=16% Similarity=0.091 Sum_probs=58.5
Q ss_pred CCCCCCEEEEECCCc-chHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 294 SLMKGAVVMDIGCGT-GILSLFAAQ-AGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 294 ~~~~~~~VLDVGcGt-G~lsl~~a~-aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
...+|.+||-+|+|. |.++..+++ ++..+|++++.++.-++.+++ .|.. ..+..-..+..+
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~-------------~~i~~~~~~~~~ 222 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGAD-------------VTINSGDVNPVD 222 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCS-------------EEEEC-CCCHHH
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCe-------------EEEeCCCCCHHH
Confidence 457899999999997 455555554 566799999999987655554 3432 112111112111
Q ss_pred -cccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 372 -LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 372 -l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
+.. ......+|+++-... . ...+....+.|+++|.++..
T Consensus 223 ~v~~--~t~g~g~d~~~~~~~-----~----~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 223 EIKK--ITGGLGVQSAIVCAV-----A----RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp HHHH--HTTSSCEEEEEECCS-----C----HHHHHHHHHTEEEEEEEEEC
T ss_pred Hhhh--hcCCCCceEEEEecc-----C----cchhheeheeecCCceEEEE
Confidence 110 012345777774221 1 23455667889999998743
No 388
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.84 E-value=0.33 Score=50.54 Aligned_cols=101 Identities=18% Similarity=0.222 Sum_probs=61.5
Q ss_pred HHhCCCCCCCCEEEEEC-CC-cchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 289 ILENPSLMKGAVVMDIG-CG-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVG-cG-tG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
+.+...+.+|++||-+| +| .|.++..++++ |+ +|++++.++..++.+++. |. + .++
T Consensus 159 l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga--------------~--~~~ 217 (353)
T 4dup_A 159 LFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERL----GA--------------K--RGI 217 (353)
T ss_dssp HTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TC--------------S--EEE
T ss_pred HHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CC--------------C--EEE
Confidence 33445678899999995 34 37777777765 88 899999999887776653 33 2 122
Q ss_pred Eccccccccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 QGMVEELGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 ~gd~e~l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
...-.++... .......+|+|+.. .|. . .+....+.|+++|.++.
T Consensus 218 ~~~~~~~~~~~~~~~~~g~Dvvid~-~g~-----~----~~~~~~~~l~~~G~iv~ 263 (353)
T 4dup_A 218 NYRSEDFAAVIKAETGQGVDIILDM-IGA-----A----YFERNIASLAKDGCLSI 263 (353)
T ss_dssp ETTTSCHHHHHHHHHSSCEEEEEES-CCG-----G----GHHHHHHTEEEEEEEEE
T ss_pred eCCchHHHHHHHHHhCCCceEEEEC-CCH-----H----HHHHHHHHhccCCEEEE
Confidence 2222221100 00113579999853 221 1 34455678999999874
No 389
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.66 E-value=0.2 Score=51.93 Aligned_cols=102 Identities=20% Similarity=0.189 Sum_probs=60.6
Q ss_pred HHhCCCCCCCCEEEEECC-C-cchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 289 ILENPSLMKGAVVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGc-G-tG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
+.+...+.+|++||.+|+ | .|.++..++++ |+ +|++++.++..++.+++ ..|. +. ++
T Consensus 147 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~---~~g~--------------~~--~~ 206 (345)
T 2j3h_A 147 FYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKT---KFGF--------------DD--AF 206 (345)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH---TSCC--------------SE--EE
T ss_pred HHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH---HcCC--------------ce--EE
Confidence 334456778999999998 3 46666666664 87 89999999876655542 2233 11 12
Q ss_pred Ecc-cccccccc-ccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 QGM-VEELGESM-QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 ~gd-~e~l~~~~-~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
... ..++.... ....+.+|+|+... | . ..+....+.|++||+++.
T Consensus 207 d~~~~~~~~~~~~~~~~~~~d~vi~~~-g-------~--~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 207 NYKEESDLTAALKRCFPNGIDIYFENV-G-------G--KMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp ETTSCSCSHHHHHHHCTTCEEEEEESS-C-------H--HHHHHHHTTEEEEEEEEE
T ss_pred ecCCHHHHHHHHHHHhCCCCcEEEECC-C-------H--HHHHHHHHHHhcCCEEEE
Confidence 211 11111000 01125699998532 1 1 245666789999999873
No 390
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.64 E-value=0.34 Score=50.18 Aligned_cols=45 Identities=29% Similarity=0.352 Sum_probs=35.5
Q ss_pred CCCCCCCEEEEECC--CcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHH
Q 006731 293 PSLMKGAVVMDIGC--GTGILSLFAAQA-GASRVIAVEASEKMAAVATQ 338 (633)
Q Consensus 293 ~~~~~~~~VLDVGc--GtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~ 338 (633)
..+.++++||.+|+ |.|.+...++++ |+ +|++++.++..++.+++
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKA 209 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh
Confidence 35678999999999 457777777765 88 89999999887766654
No 391
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=91.63 E-value=0.086 Score=55.17 Aligned_cols=94 Identities=23% Similarity=0.244 Sum_probs=57.5
Q ss_pred CCC-CCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc-cc
Q 006731 294 SLM-KGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG-MV 369 (633)
Q Consensus 294 ~~~-~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g-d~ 369 (633)
... +|.+||-+|+|. |.++..+|++ |+ +|++++.++...+.+++ ..|. +.+ +.. +.
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~---~lGa--------------~~v--i~~~~~ 235 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQ---DLGA--------------DDY--VIGSDQ 235 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHT---TSCC--------------SCE--EETTCH
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHH---HcCC--------------cee--eccccH
Confidence 455 899999999886 7777777776 88 89999998865544431 3343 221 221 11
Q ss_pred cccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 370 EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 370 e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
..+. ... +.+|+|+- ..|.- . .+....+.|+|+|+++.
T Consensus 236 ~~~~---~~~-~g~D~vid-~~g~~----~----~~~~~~~~l~~~G~iv~ 273 (357)
T 2cf5_A 236 AKMS---ELA-DSLDYVID-TVPVH----H----ALEPYLSLLKLDGKLIL 273 (357)
T ss_dssp HHHH---HST-TTEEEEEE-CCCSC----C----CSHHHHTTEEEEEEEEE
T ss_pred HHHH---Hhc-CCCCEEEE-CCCCh----H----HHHHHHHHhccCCEEEE
Confidence 1111 022 46999984 23321 1 12344578999999873
No 392
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=91.59 E-value=0.61 Score=48.31 Aligned_cols=98 Identities=21% Similarity=0.264 Sum_probs=60.4
Q ss_pred HHhCCCCCCCCEEEEECC-Cc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 289 ILENPSLMKGAVVMDIGC-GT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGc-Gt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
+.+...+.+|.+||-+|+ |. |.++..++++ |+ +|+++ .++..++.+++. |. +. +
T Consensus 142 l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~l----Ga--------------~~---i 198 (343)
T 3gaz_A 142 LVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDL----GA--------------TP---I 198 (343)
T ss_dssp HTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHH----TS--------------EE---E
T ss_pred HHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHc----CC--------------CE---e
Confidence 334456778999999994 43 7777777776 88 89999 888776666542 33 21 2
Q ss_pred Ecccccccccc--ccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 QGMVEELGESM--QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 ~gd~e~l~~~~--~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
. +-.++.... ......+|+|+-. .| . ..+....+.|+++|.++.
T Consensus 199 ~-~~~~~~~~~~~~~~~~g~D~vid~-~g----~-----~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 199 D-ASREPEDYAAEHTAGQGFDLVYDT-LG----G-----PVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp E-TTSCHHHHHHHHHTTSCEEEEEES-SC----T-----HHHHHHHHHEEEEEEEEE
T ss_pred c-cCCCHHHHHHHHhcCCCceEEEEC-CC----c-----HHHHHHHHHHhcCCeEEE
Confidence 2 222221000 0123579999852 22 1 245556678999999883
No 393
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.53 E-value=0.69 Score=47.91 Aligned_cols=98 Identities=19% Similarity=0.255 Sum_probs=59.1
Q ss_pred CCCCCCCEEEEECCCc--chHHHHHHH-c-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 293 PSLMKGAVVMDIGCGT--GILSLFAAQ-A-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 293 ~~~~~~~~VLDVGcGt--G~lsl~~a~-a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
..+.++++||.+|+|. |.++..+++ . |+ +|++++.++...+.+++. |. +. ++...
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~----g~--------------~~--~~~~~ 224 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA----GA--------------DY--VINAS 224 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH----TC--------------SE--EEETT
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh----CC--------------CE--EecCC
Confidence 3567899999999984 555555554 4 87 899999999877666542 32 21 12211
Q ss_pred cccccc-ccccCC-CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 369 VEELGE-SMQIQP-HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 369 ~e~l~~-~~~l~~-~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
-.+... ...+.. +.+|+|+... |. ...+....+.|+|+|+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~d~vi~~~-g~--------~~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 225 MQDPLAEIRRITESKGVDAVIDLN-NS--------EKTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp TSCHHHHHHHHTTTSCEEEEEESC-CC--------HHHHTTGGGGEEEEEEEEE
T ss_pred CccHHHHHHHHhcCCCceEEEECC-CC--------HHHHHHHHHHHhcCCEEEE
Confidence 111100 000122 4799998532 21 2345666789999999873
No 394
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=91.34 E-value=0.22 Score=51.96 Aligned_cols=42 Identities=14% Similarity=0.124 Sum_probs=30.3
Q ss_pred HHHhCCCCCCC-CEEEEECC-Cc-chHHHHHHHc-CCCeEEEEeCCH
Q 006731 288 AILENPSLMKG-AVVMDIGC-GT-GILSLFAAQA-GASRVIAVEASE 330 (633)
Q Consensus 288 aI~~~~~~~~~-~~VLDVGc-Gt-G~lsl~~a~a-Ga~~V~aVD~S~ 330 (633)
++.+...+.+| .+||-.|+ |. |.++..+|++ |+ +|+++..++
T Consensus 157 ~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~ 202 (364)
T 1gu7_A 157 MLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDR 202 (364)
T ss_dssp HHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCC
T ss_pred HHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCc
Confidence 34443456788 99999998 54 7888888886 88 777776443
No 395
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.28 E-value=0.23 Score=51.58 Aligned_cols=97 Identities=14% Similarity=0.176 Sum_probs=58.2
Q ss_pred CCCCCCEEEEECCC--cchHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcc-c
Q 006731 294 SLMKGAVVMDIGCG--TGILSLFAAQ-AGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM-V 369 (633)
Q Consensus 294 ~~~~~~~VLDVGcG--tG~lsl~~a~-aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd-~ 369 (633)
.+.+|++||.+|++ .|.....+++ .|+ +|++++.++...+.+++ .|. + .++... .
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~----~g~--------------~--~~~d~~~~ 224 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRS----IGG--------------E--VFIDFTKE 224 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHH----TTC--------------C--EEEETTTC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHH----cCC--------------c--eEEecCcc
Confidence 56789999999993 4666666665 488 99999998876655543 233 2 122111 1
Q ss_pred ccccccc-ccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 370 EELGESM-QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 370 e~l~~~~-~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
.++.... ....+.+|+||... +. ...+....+.|+++|+++.
T Consensus 225 ~~~~~~~~~~~~~~~D~vi~~~-g~--------~~~~~~~~~~l~~~G~iv~ 267 (347)
T 2hcy_A 225 KDIVGAVLKATDGGAHGVINVS-VS--------EAAIEASTRYVRANGTTVL 267 (347)
T ss_dssp SCHHHHHHHHHTSCEEEEEECS-SC--------HHHHHHHTTSEEEEEEEEE
T ss_pred HhHHHHHHHHhCCCCCEEEECC-Cc--------HHHHHHHHHHHhcCCEEEE
Confidence 1111000 01112799998632 21 2356677789999999873
No 396
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.26 E-value=1.1 Score=44.30 Aligned_cols=79 Identities=19% Similarity=0.204 Sum_probs=54.9
Q ss_pred CCCCEEEEECCC--cch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccc
Q 006731 296 MKGAVVMDIGCG--TGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (633)
Q Consensus 296 ~~~~~VLDVGcG--tG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e 370 (633)
.++++||-.|++ +|+ ++..+++.|+ +|+.++.+....+.+.+.....+- .++.++.+|+.
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~D~~ 69 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDR--------------NDSIILPCDVT 69 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSS--------------CCCEEEECCCS
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCC--------------CCceEEeCCCC
Confidence 568999999987 554 6777778898 899999887666566665554432 47899999998
Q ss_pred cccccccc------CCCcccEEEEe
Q 006731 371 ELGESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 371 ~l~~~~~l------~~~~~DvIvse 389 (633)
+...-..+ ..+++|++|..
T Consensus 70 ~~~~v~~~~~~~~~~~g~id~li~~ 94 (266)
T 3oig_A 70 NDAEIETCFASIKEQVGVIHGIAHC 94 (266)
T ss_dssp SSHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CHHHHHHHHHHHHHHhCCeeEEEEc
Confidence 75411000 01478999975
No 397
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.26 E-value=0.36 Score=39.44 Aligned_cols=61 Identities=18% Similarity=0.151 Sum_probs=44.5
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHH
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~ 123 (633)
....|-.|+..|.+...+..||+..|.=.-. .-.|.+ .-..|..||+.|.....|..||+-
T Consensus 24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~-------~~~~~c-----------~~~~C~~C~k~f~~~~~L~~H~~~ 84 (95)
T 2ej4_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPE-------QNNHVC-----------YWEECPREGKSFKAKYKLVNHIRV 84 (95)
T ss_dssp SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTT-------CSCCCC-----------CCTTCSSTTCCCSSHHHHHHHHHH
T ss_pred CCCcccccccccCCHHHHHHHHHHhccCCCC-------CCccce-----------eccCCCCCCcccCCHHHHHHHHHh
Confidence 4567999999999999999999976642110 000110 013699999999999999999973
No 398
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=91.23 E-value=1 Score=44.98 Aligned_cols=112 Identities=18% Similarity=0.175 Sum_probs=68.0
Q ss_pred CCEEEEECCCcchHHHHHHHc-------C-CCeEEEEeCCHHHH------------------------HHHHHHHH--hC
Q 006731 298 GAVVMDIGCGTGILSLFAAQA-------G-ASRVIAVEASEKMA------------------------AVATQIAK--DN 343 (633)
Q Consensus 298 ~~~VLDVGcGtG~lsl~~a~a-------G-a~~V~aVD~S~~~~------------------------~~A~~~~~--~n 343 (633)
...|+++|+-.|..++.+++. + .++|+++|.-..+- +..++.+. .+
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 459999999999877776653 2 37999999211111 11111111 01
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEEcccccccccc--ccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEee
Q 006731 344 DFWWDRPQSEGNINNAGKMEVVQGMVEELGESM--QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 344 gl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~--~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
. ...+...++|+++.|++.+..... ..+..++|+|.... + .++ .....+..+...|+|||+|+.+
T Consensus 150 ~--------~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~-D---~Y~-~t~~~le~~~p~l~~GGvIv~D 216 (257)
T 3tos_A 150 S--------DFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL-D---LYE-PTKAVLEAIRPYLTKGSIVAFD 216 (257)
T ss_dssp T--------STTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC-C---CHH-HHHHHHHHHGGGEEEEEEEEES
T ss_pred h--------hhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC-c---ccc-hHHHHHHHHHHHhCCCcEEEEc
Confidence 0 011122388999999998753211 12345799998643 1 123 2345677888999999999976
Q ss_pred c
Q 006731 422 T 422 (633)
Q Consensus 422 ~ 422 (633)
.
T Consensus 217 D 217 (257)
T 3tos_A 217 E 217 (257)
T ss_dssp S
T ss_pred C
Confidence 5
No 399
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=91.19 E-value=0.39 Score=50.05 Aligned_cols=102 Identities=18% Similarity=0.294 Sum_probs=59.9
Q ss_pred HHHhCCCCCCCCEEEEECCC--cchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEE
Q 006731 288 AILENPSLMKGAVVMDIGCG--TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGcG--tG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~v 364 (633)
++.....+.++++||-.|++ .|.....++++ |+ +|++++.++..++.+++ .|. + .+
T Consensus 161 al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga--------------~--~~ 219 (351)
T 1yb5_A 161 ALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQ----NGA--------------H--EV 219 (351)
T ss_dssp HHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTC--------------S--EE
T ss_pred HHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH----cCC--------------C--EE
Confidence 34444567789999999983 36666655554 87 89999999877655543 333 2 12
Q ss_pred EEcccccccccc--ccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 365 VQGMVEELGESM--QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 365 i~gd~e~l~~~~--~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+...-.++.... ......+|+||.. .|. ..+....+.|+|+|+++.
T Consensus 220 ~d~~~~~~~~~~~~~~~~~~~D~vi~~-~G~---------~~~~~~~~~l~~~G~iv~ 267 (351)
T 1yb5_A 220 FNHREVNYIDKIKKYVGEKGIDIIIEM-LAN---------VNLSKDLSLLSHGGRVIV 267 (351)
T ss_dssp EETTSTTHHHHHHHHHCTTCEEEEEES-CHH---------HHHHHHHHHEEEEEEEEE
T ss_pred EeCCCchHHHHHHHHcCCCCcEEEEEC-CCh---------HHHHHHHHhccCCCEEEE
Confidence 222111111000 0122479999853 221 134455788999999884
No 400
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=91.16 E-value=0.079 Score=47.51 Aligned_cols=80 Identities=15% Similarity=0.195 Sum_probs=52.9
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhccc--ccccccCCccCCHHHHHHHHH
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNHLH 122 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~--~~C~~C~~~~~~~~~~~~Hm~ 122 (633)
.+..|-.|+..|.+...+..||+...+- -+.....=+--|...-.|..-+|....+ ..|..||+.|.....|..||+
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~~H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~ 99 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFNIHSWE-KKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIK 99 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHHHHHCC-SCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHH
T ss_pred cCeECCCCCCCcCCHHHHHHHHHHcCCC-CCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhH
Confidence 5689999999999999999999853221 1111111122334434455555544333 349999999999999999997
Q ss_pred Hhc
Q 006731 123 EAY 125 (633)
Q Consensus 123 ~~~ 125 (633)
..+
T Consensus 100 ~hh 102 (133)
T 2lt7_A 100 SVH 102 (133)
T ss_dssp HHT
T ss_pred Hhc
Confidence 543
No 401
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=91.11 E-value=0.18 Score=51.25 Aligned_cols=90 Identities=18% Similarity=0.175 Sum_probs=58.3
Q ss_pred CCCCCEEEEECC-C-cchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccc-c
Q 006731 295 LMKGAVVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV-E 370 (633)
Q Consensus 295 ~~~~~~VLDVGc-G-tG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~-e 370 (633)
+.+|++||-+|+ | .|.++..++++ |+ +|++++.++...+.+++ .|. +. ++...- .
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga--------------~~--~~~~~~~~ 181 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLA----LGA--------------EE--AATYAEVP 181 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHH----TTC--------------SE--EEEGGGHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCC--------------CE--EEECCcch
Confidence 678999999998 4 37777777765 87 99999998876655543 343 22 232221 2
Q ss_pred ccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 371 ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 371 ~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
++... + ..+|+|+. .|. . .+....+.|+++|+++.
T Consensus 182 ~~~~~--~--~~~d~vid--~g~-----~----~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 182 ERAKA--W--GGLDLVLE--VRG-----K----EVEESLGLLAHGGRLVY 216 (302)
T ss_dssp HHHHH--T--TSEEEEEE--CSC-----T----THHHHHTTEEEEEEEEE
T ss_pred hHHHH--h--cCceEEEE--CCH-----H----HHHHHHHhhccCCEEEE
Confidence 22211 2 57999985 432 1 24556688999999873
No 402
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.06 E-value=1.5 Score=43.57 Aligned_cols=109 Identities=19% Similarity=0.234 Sum_probs=67.9
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCC------------HHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEAS------------EKMAAVATQIAKDNDFWWDRPQSEGNINNA 359 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S------------~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~ 359 (633)
..++++||-.|++.|+ ++..+++.|+ +|+.++.+ ...++.+...+...+
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 70 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--------------- 70 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT---------------
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcC---------------
Confidence 3578999999998874 5666777798 89999987 555545544444433
Q ss_pred CcEEEEEcccccccccccc------CCCcccEEEEecccccc----cChhhHH-----------HHHHHHhhcccCCcEE
Q 006731 360 GKMEVVQGMVEELGESMQI------QPHSVDVLVSEWMGYCL----LYESMLS-----------SVLFARDQWLKPGGAI 418 (633)
Q Consensus 360 ~~I~vi~gd~e~l~~~~~l------~~~~~DvIvse~mg~~L----~~e~~l~-----------~vl~a~~r~LkpgG~l 418 (633)
.++.++.+|+.+...-..+ ..+++|++|.+. |... .....+. .+.+++.+.++++|.+
T Consensus 71 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nA-g~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~i 149 (287)
T 3pxx_A 71 RKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANA-GICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASI 149 (287)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC-CCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEE
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC-CcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEE
Confidence 5789999998875411000 014799999763 1111 1112222 2445666777777877
Q ss_pred Ee
Q 006731 419 LP 420 (633)
Q Consensus 419 ip 420 (633)
+.
T Consensus 150 v~ 151 (287)
T 3pxx_A 150 IT 151 (287)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 403
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=91.06 E-value=0.18 Score=42.46 Aligned_cols=76 Identities=22% Similarity=0.208 Sum_probs=48.3
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcc--cccccccCCccCCHHHHHHHHH
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVA--ENRCWICGLTCQSNQDLQNHLH 122 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~--~~~C~~C~~~~~~~~~~~~Hm~ 122 (633)
.+..|-.|+..|.+...+..||+. |.= ......-+.-|...-.|..-++ ... ...|..|++.|.....|+.||+
T Consensus 15 ~~~~C~~C~~~f~~~~~l~~H~~~-H~~--~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~ 90 (107)
T 1wjp_A 15 EVYQCRLCNAKLSSLLEQGSHERL-CRN--AAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQV 90 (107)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHH-HHH--SBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHH
T ss_pred cCeECCCCCCccCCHHHHHHHHHH-CCC--CccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHH
Confidence 578999999999999999999986 410 0000111122222222333332 221 2349999999999999999997
Q ss_pred Hh
Q 006731 123 EA 124 (633)
Q Consensus 123 ~~ 124 (633)
..
T Consensus 91 ~~ 92 (107)
T 1wjp_A 91 EV 92 (107)
T ss_dssp HT
T ss_pred HH
Confidence 43
No 404
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=90.80 E-value=0.26 Score=51.77 Aligned_cols=95 Identities=17% Similarity=0.201 Sum_probs=55.6
Q ss_pred CCCCCEEEEEC-CCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 295 LMKGAVVMDIG-CGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 295 ~~~~~~VLDVG-cGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
..+|++||-.| +|. |.++..+|++ |+ +|++++ ++.-.+.++ ..|. + .++..+-.+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~----~lGa--------------~--~v~~~~~~~ 238 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVR----KLGA--------------D--DVIDYKSGS 238 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHH----HTTC--------------S--EEEETTSSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHH----HcCC--------------C--EEEECCchH
Confidence 67899999999 464 7777777776 87 899998 554444443 3443 2 122222112
Q ss_pred cccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 372 LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 372 l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
+.... .....+|+|+-. .|. . ...+....+.|+++|+++.
T Consensus 239 ~~~~~-~~~~g~D~vid~-~g~----~---~~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 239 VEEQL-KSLKPFDFILDN-VGG----S---TETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp HHHHH-HTSCCBSEEEES-SCT----T---HHHHGGGGBCSSSCCEEEE
T ss_pred HHHHH-hhcCCCCEEEEC-CCC----h---hhhhHHHHHhhcCCcEEEE
Confidence 11000 112469999842 221 1 1234555678999999873
No 405
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=90.76 E-value=0.24 Score=38.92 Aligned_cols=53 Identities=26% Similarity=0.475 Sum_probs=43.1
Q ss_pred CCceeec--CCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccc--cCCccCCHHHHHHH
Q 006731 45 SGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWI--CGLTCQSNQDLQNH 120 (633)
Q Consensus 45 ~~~~CLF--C~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~--C~~~~~~~~~~~~H 120 (633)
.+..|-+ |+..|.+...+..||+..|.= .....|.. |++.|.....|..|
T Consensus 6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~--------------------------~~~~~C~~~~C~k~f~~~~~L~~H 59 (79)
T 2dlk_A 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIH--------------------------QKSFSCPEPACGKSFNFKKHLKEH 59 (79)
T ss_dssp SSEECSSTTTCCEESSHHHHHHHHHHGGGS--------------------------CCCEECSCTTTCCEESSHHHHHHH
T ss_pred CCccCCCCCCcCccCCHHHHHHHHHHHhCC--------------------------CCCeECCCCCCcCccCCHHHHHHH
Confidence 5788998 999999999999999966631 01135888 99999999999999
Q ss_pred HHH
Q 006731 121 LHE 123 (633)
Q Consensus 121 m~~ 123 (633)
|+-
T Consensus 60 ~~~ 62 (79)
T 2dlk_A 60 MKL 62 (79)
T ss_dssp HHH
T ss_pred HHH
Confidence 973
No 406
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=90.71 E-value=0.21 Score=42.56 Aligned_cols=79 Identities=19% Similarity=0.289 Sum_probs=49.7
Q ss_pred CCceeec--CCCCCCCHHHHHHHhhhhcCcchhhhh-ccccccccCceeeehhhHhhccc--ccccccCCccCCHHHHHH
Q 006731 45 SGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVK-TELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQN 119 (633)
Q Consensus 45 ~~~~CLF--C~~~~~~~~~~l~Hm~~~H~Fd~~~~~-~~~~ld~Y~~IKlINyiR~~~~~--~~C~~C~~~~~~~~~~~~ 119 (633)
.+..|-+ |+..|.+...+..||+..++-...... ..=+.-|-..-.|..-++..... ..|..|++.|.....|+.
T Consensus 5 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~ 84 (119)
T 2jp9_A 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKT 84 (119)
T ss_dssp CCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred eeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHH
Confidence 5688998 999999999999999966542111000 00111222222244444443333 349999999999899999
Q ss_pred HHHH
Q 006731 120 HLHE 123 (633)
Q Consensus 120 Hm~~ 123 (633)
||..
T Consensus 85 H~~~ 88 (119)
T 2jp9_A 85 HTRT 88 (119)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9963
No 407
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=90.53 E-value=0.19 Score=40.54 Aligned_cols=22 Identities=23% Similarity=0.513 Sum_probs=19.1
Q ss_pred ccccccCCccCCHHHHHHHHHH
Q 006731 102 NRCWICGLTCQSNQDLQNHLHE 123 (633)
Q Consensus 102 ~~C~~C~~~~~~~~~~~~Hm~~ 123 (633)
..|..|++.|.....|+.||..
T Consensus 35 ~~C~~C~~~f~~~~~l~~H~~~ 56 (90)
T 1a1h_A 35 FQCRICMRNFSRSDHLTTHIRT 56 (90)
T ss_dssp EECTTTCCEESCHHHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHHH
Confidence 3599999999999999999963
No 408
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.36 E-value=0.53 Score=48.23 Aligned_cols=101 Identities=17% Similarity=0.166 Sum_probs=59.0
Q ss_pred HHhCCCCCCCCEEEEECCC--cchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 289 ILENPSLMKGAVVMDIGCG--TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGcG--tG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
+.....+.++++||-.|++ .|.....++++ |+ +|++++.++...+.+++. |. +. ++
T Consensus 132 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~----g~--------------~~--~~ 190 (327)
T 1qor_A 132 LRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA----GA--------------WQ--VI 190 (327)
T ss_dssp HHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----TC--------------SE--EE
T ss_pred HHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc----CC--------------CE--EE
Confidence 4334467789999999953 35555555554 88 899999998777666542 32 21 12
Q ss_pred Eccccccccc-cc-cCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 QGMVEELGES-MQ-IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 ~gd~e~l~~~-~~-l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
...-.++... .. .....+|+||... | . ..+....+.|+++|+++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~D~vi~~~-g-----~----~~~~~~~~~l~~~G~iv~ 237 (327)
T 1qor_A 191 NYREEDLVERLKEITGGKKVRVVYDSV-G-----R----DTWERSLDCLQRRGLMVS 237 (327)
T ss_dssp ETTTSCHHHHHHHHTTTCCEEEEEECS-C-----G----GGHHHHHHTEEEEEEEEE
T ss_pred ECCCccHHHHHHHHhCCCCceEEEECC-c-----h----HHHHHHHHHhcCCCEEEE
Confidence 2111111100 00 1124699998532 2 1 234556678999999873
No 409
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.36 E-value=0.36 Score=55.18 Aligned_cols=125 Identities=16% Similarity=0.091 Sum_probs=69.4
Q ss_pred CCCEEEEECCCcchHHHHHHHcC----------C---CeEEEEeCCHHHHHHHHH--------------HHHhCCCCCCC
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAG----------A---SRVIAVEASEKMAAVATQ--------------IAKDNDFWWDR 349 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aG----------a---~~V~aVD~S~~~~~~A~~--------------~~~~ngl~~~~ 349 (633)
+.-+|||+|-|+|+..+.+.++- . -+++++|..|...+.+++ .+...... .
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~--~ 135 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLP--L 135 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCC--C
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCccc--C
Confidence 44699999999998666655431 1 269999994433222222 22211100 0
Q ss_pred CCCCC--CCCCCCcEEEEEcccccccccccc-CCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeecc
Q 006731 350 PQSEG--NINNAGKMEVVQGMVEELGESMQI-QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (633)
Q Consensus 350 ~~~~~--~~~~~~~I~vi~gd~e~l~~~~~l-~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~~ 423 (633)
+-.-. .....-.++++.||+.+.-..... ...++|.++...+.-.-..+---..++..+.++++|||.+...++
T Consensus 136 ~~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~ 212 (689)
T 3pvc_A 136 AGCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTA 212 (689)
T ss_dssp SEEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCC
T ss_pred CCceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccC
Confidence 00000 011123788999999876422110 136899999765322111221135678888999999999875443
No 410
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=90.31 E-value=0.68 Score=48.20 Aligned_cols=43 Identities=19% Similarity=0.238 Sum_probs=30.5
Q ss_pred HHHhCCCCCCCCEEEEECC-Cc-chHHHHHHHc-CCCeEEEEeCCH
Q 006731 288 AILENPSLMKGAVVMDIGC-GT-GILSLFAAQA-GASRVIAVEASE 330 (633)
Q Consensus 288 aI~~~~~~~~~~~VLDVGc-Gt-G~lsl~~a~a-Ga~~V~aVD~S~ 330 (633)
++.....+.+|.+||-+|+ |. |.++..+|++ |++.|..++.++
T Consensus 158 ~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~ 203 (357)
T 1zsy_A 158 MLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP 203 (357)
T ss_dssp HHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred HHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence 3444446778999999998 43 8888888886 885555565544
No 411
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=90.28 E-value=0.25 Score=51.07 Aligned_cols=49 Identities=22% Similarity=0.341 Sum_probs=41.6
Q ss_pred CCCCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCH---HHHHHHHHHHHhCC
Q 006731 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASE---KMAAVATQIAKDND 344 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~---~~~~~A~~~~~~ng 344 (633)
..+|..|||.-||+|..+..+.+.|. +.+|+|+++ ..++.|+++++..+
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHHcc
Confidence 36789999999999999999999986 999999999 99999999887544
No 412
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.28 E-value=0.23 Score=52.03 Aligned_cols=43 Identities=26% Similarity=0.317 Sum_probs=33.3
Q ss_pred CCC-CCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHH
Q 006731 294 SLM-KGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVAT 337 (633)
Q Consensus 294 ~~~-~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~ 337 (633)
... +|.+||-+|+|. |.++..+|++ |+ +|++++.++...+.++
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~ 228 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEAL 228 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHH
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 355 889999999876 7777777776 87 8999999986654443
No 413
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.08 E-value=1.2 Score=39.39 Aligned_cols=69 Identities=17% Similarity=0.157 Sum_probs=45.9
Q ss_pred CCEEEEECCCc-c-hHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 298 GAVVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 298 ~~~VLDVGcGt-G-~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
.++|+-+|+|. | .++..+++.|. +|+++|.++..++.+++ ..+.++.+|..+...-
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~---------------------~~~~~~~gd~~~~~~l 63 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLED---------------------EGFDAVIADPTDESFY 63 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH---------------------TTCEEEECCTTCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHH---------------------CCCcEEECCCCCHHHH
Confidence 46799999986 4 35556666687 89999999987654442 2256788888764311
Q ss_pred cccCCCcccEEEE
Q 006731 376 MQIQPHSVDVLVS 388 (633)
Q Consensus 376 ~~l~~~~~DvIvs 388 (633)
.......+|+||.
T Consensus 64 ~~~~~~~~d~vi~ 76 (141)
T 3llv_A 64 RSLDLEGVSAVLI 76 (141)
T ss_dssp HHSCCTTCSEEEE
T ss_pred HhCCcccCCEEEE
Confidence 1122357999886
No 414
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=90.08 E-value=0.12 Score=34.03 Aligned_cols=27 Identities=33% Similarity=0.551 Sum_probs=24.7
Q ss_pred CceeecCCCCCCCHHHHHHHhhhhcCc
Q 006731 46 GFLCLFCDAGYSSCDTLFEHCRLSHCF 72 (633)
Q Consensus 46 ~~~CLFC~~~~~~~~~~l~Hm~~~H~F 72 (633)
.--|-||.+.++++..++.|.++.|+.
T Consensus 9 kqhcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 9 KQHCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 457999999999999999999999974
No 415
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.97 E-value=1.3 Score=41.05 Aligned_cols=71 Identities=18% Similarity=0.151 Sum_probs=44.8
Q ss_pred CCCCEEEEECCCc-c-hHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGT-G-ILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGt-G-~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
..+.+|+-+|+|. | .++..+.+. |. +|+++|.++..++.++ ..| +.++.+|..+.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~----~~g-----------------~~~~~gd~~~~ 94 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHR----SEG-----------------RNVISGDATDP 94 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHH----HTT-----------------CCEEECCTTCH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHH----HCC-----------------CCEEEcCCCCH
Confidence 3467899999986 5 345566666 77 8999999997664443 223 34567776543
Q ss_pred cccccc-CCCcccEEEE
Q 006731 373 GESMQI-QPHSVDVLVS 388 (633)
Q Consensus 373 ~~~~~l-~~~~~DvIvs 388 (633)
...... ....+|+||.
T Consensus 95 ~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 95 DFWERILDTGHVKLVLL 111 (183)
T ss_dssp HHHHTBCSCCCCCEEEE
T ss_pred HHHHhccCCCCCCEEEE
Confidence 210012 2357999986
No 416
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=89.71 E-value=0.34 Score=52.99 Aligned_cols=60 Identities=10% Similarity=-0.015 Sum_probs=46.6
Q ss_pred CCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 298 GAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 298 ~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.-+|+|+-||.|.+++-+.++|...|+|+|+++.+++.-+.+... . ....++.+|+.++.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~---~-------------p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYC---D-------------PATHHFNEDIRDIT 147 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCC---C-------------TTTCEEESCTHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhccc---C-------------CCcceeccchhhhh
Confidence 468999999999999999999998899999999877655544311 1 23456778988775
No 417
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=89.70 E-value=0.46 Score=49.41 Aligned_cols=99 Identities=16% Similarity=0.232 Sum_probs=57.9
Q ss_pred CCCCCC--CEEEEECCC--cchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc
Q 006731 293 PSLMKG--AVVMDIGCG--TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (633)
Q Consensus 293 ~~~~~~--~~VLDVGcG--tG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g 367 (633)
..+.++ ++||-.|++ .|.+...++++ |+++|++++.++...+.+++ ..|. + .++..
T Consensus 154 ~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~---~~g~--------------~--~~~d~ 214 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS---ELGF--------------D--AAINY 214 (357)
T ss_dssp SCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH---TSCC--------------S--EEEET
T ss_pred cCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH---HcCC--------------c--eEEec
Confidence 356788 999999983 35665555554 87799999999866555443 1232 1 12221
Q ss_pred cccccccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 368 MVEELGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 368 d~e~l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
.-.++... .....+.+|++|... | ...+....+.|+++|+++.
T Consensus 215 ~~~~~~~~~~~~~~~~~d~vi~~~-G---------~~~~~~~~~~l~~~G~iv~ 258 (357)
T 2zb4_A 215 KKDNVAEQLRESCPAGVDVYFDNV-G---------GNISDTVISQMNENSHIIL 258 (357)
T ss_dssp TTSCHHHHHHHHCTTCEEEEEESC-C---------HHHHHHHHHTEEEEEEEEE
T ss_pred CchHHHHHHHHhcCCCCCEEEECC-C---------HHHHHHHHHHhccCcEEEE
Confidence 11111100 001123799998532 2 1345566789999999873
No 418
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.66 E-value=0.75 Score=49.29 Aligned_cols=94 Identities=16% Similarity=0.179 Sum_probs=59.7
Q ss_pred CCEEEEECCCc-c-hHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 298 GAVVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 298 ~~~VLDVGcGt-G-~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
+.+|+-+|+|. | .++..+.+.|. .|++||.++..++.+++ .| +.++.||..+...-
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~----~g-----------------~~vi~GDat~~~~L 61 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRK----FG-----------------MKVFYGDATRMDLL 61 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHH----TT-----------------CCCEESCTTCHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHh----CC-----------------CeEEEcCCCCHHHH
Confidence 45799999986 4 34555555676 89999999998866653 22 45788998875421
Q ss_pred cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 376 ~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
.......+|+||+-. ........+-...+.+.|...++
T Consensus 62 ~~agi~~A~~viv~~------~~~~~n~~i~~~ar~~~p~~~Ii 99 (413)
T 3l9w_A 62 ESAGAAKAEVLINAI------DDPQTNLQLTEMVKEHFPHLQII 99 (413)
T ss_dssp HHTTTTTCSEEEECC------SSHHHHHHHHHHHHHHCTTCEEE
T ss_pred HhcCCCccCEEEECC------CChHHHHHHHHHHHHhCCCCeEE
Confidence 112346799998632 12223333444456677876666
No 419
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=89.61 E-value=1.1 Score=48.26 Aligned_cols=45 Identities=22% Similarity=0.347 Sum_probs=35.1
Q ss_pred CCCCCCCEEEEECC-Cc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHH
Q 006731 293 PSLMKGAVVMDIGC-GT-GILSLFAAQA-GASRVIAVEASEKMAAVATQ 338 (633)
Q Consensus 293 ~~~~~~~~VLDVGc-Gt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~ 338 (633)
..+.+|++||-.|+ |. |.++..++++ |+ +|++++.++.-++.+++
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 45788999999998 43 7777777776 77 89999998877766643
No 420
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=89.60 E-value=0.41 Score=40.02 Aligned_cols=50 Identities=20% Similarity=0.293 Sum_probs=41.3
Q ss_pred CCceeecCCCCC-CCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHH-HH
Q 006731 45 SGFLCLFCDAGY-SSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNH-LH 122 (633)
Q Consensus 45 ~~~~CLFC~~~~-~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~H-m~ 122 (633)
.+..|-.|++.| .+...+..||+.. += ....|-.||+.|.....|..| |.
T Consensus 33 ~~~~C~~C~k~F~~~~~~L~~H~~~h-~~---------------------------k~~~C~~Cgk~F~~~~~L~~H~~~ 84 (96)
T 2ctd_A 33 GSVSCPTCQAVGRKTIEGLKKHMENC-KQ---------------------------EMFTCHHCGKQLRSLAGMKYHVMA 84 (96)
T ss_dssp SCEECTTTCSCEESSHHHHHHHHHHH-CC---------------------------CCCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CCcCCCCCCCCcccCHHHHHHHHHHH-CC---------------------------CCeECCCCCCeeCCHHHHHHHhHH
Confidence 578999999999 9999999999853 21 013699999999999999999 64
No 421
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=89.52 E-value=1 Score=47.22 Aligned_cols=94 Identities=15% Similarity=0.077 Sum_probs=55.6
Q ss_pred CCCCEEEEECC-C-cchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGc-G-tG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.+|.+||-+|+ | .|.++..+|++ |+ +|+++- ++.-.+.++ ..|.. .++...-.++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~----~lGa~----------------~vi~~~~~~~ 220 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAK----SRGAE----------------EVFDYRAPNL 220 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHH----HTTCS----------------EEEETTSTTH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHH----HcCCc----------------EEEECCCchH
Confidence 68899999999 3 48888888886 88 899885 776555554 34442 2233222221
Q ss_pred ccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcc-cCCcEEEe
Q 006731 373 GES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWL-KPGGAILP 420 (633)
Q Consensus 373 ~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~L-kpgG~lip 420 (633)
... ..+..+.+|+|+- ..|. ...+....+.| ++||+++.
T Consensus 221 ~~~v~~~t~g~~d~v~d-~~g~--------~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 221 AQTIRTYTKNNLRYALD-CITN--------VESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp HHHHHHHTTTCCCEEEE-SSCS--------HHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHccCCccEEEE-CCCc--------hHHHHHHHHHhhcCCCEEEE
Confidence 100 0022345999984 2221 22344455667 69999874
No 422
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=89.51 E-value=1 Score=44.84 Aligned_cols=79 Identities=24% Similarity=0.221 Sum_probs=59.6
Q ss_pred CCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.+||++|--|++.|+ .+..+++.|+ +|+.+|.++..++.+.+.++..| .++.++++|+.+.
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g---------------~~~~~~~~Dvt~~ 68 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMG---------------KEVLGVKADVSKK 68 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CCEEEEECCTTSH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC---------------CcEEEEEccCCCH
Confidence 579999999999985 5777788898 89999999988777777666655 5688999999875
Q ss_pred ccccc------cCCCcccEEEEec
Q 006731 373 GESMQ------IQPHSVDVLVSEW 390 (633)
Q Consensus 373 ~~~~~------l~~~~~DvIvse~ 390 (633)
..-.. -.-++.|++|.+.
T Consensus 69 ~~v~~~~~~~~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 69 KDVEEFVRRTFETYSRIDVLCNNA 92 (254)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 42100 0126899999863
No 423
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=89.45 E-value=0.059 Score=43.91 Aligned_cols=56 Identities=18% Similarity=0.201 Sum_probs=46.0
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~~ 124 (633)
.+..|-.|+..|.+...+..||+..|+. ...|..|++.|.....|..||+..
T Consensus 30 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~----------------------------~~~c~~C~~~f~~~~~L~~H~~~~ 81 (88)
T 1llm_C 30 KPFACDICGRKFARSDERKRHRDIQHIL----------------------------PILEDKVEELLSKNYHLENEVARL 81 (88)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHTHH----------------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCCCccCCHHHHHHHHHHhCCC----------------------------cchHHHHHHHHHHHhhhHHHHHHH
Confidence 4789999999999999999999988731 013788999999889999999876
Q ss_pred cccc
Q 006731 125 YNLK 128 (633)
Q Consensus 125 ~~~~ 128 (633)
+...
T Consensus 82 h~~~ 85 (88)
T 1llm_C 82 KKLV 85 (88)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 5543
No 424
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.29 E-value=1.5 Score=39.51 Aligned_cols=97 Identities=9% Similarity=0.006 Sum_probs=54.8
Q ss_pred CCEEEEECCCc-c-hHHHHHHHcCCCeEEEEeCC-HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 298 GAVVMDIGCGT-G-ILSLFAAQAGASRVIAVEAS-EKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 298 ~~~VLDVGcGt-G-~lsl~~a~aGa~~V~aVD~S-~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
.++|+-+|+|. | .++..+.+.|. .|+++|.+ +..++....... ..+.++.||..+...
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~------------------~~~~~i~gd~~~~~~ 63 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG------------------DNADVIPGDSNDSSV 63 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC------------------TTCEEEESCTTSHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc------------------CCCeEEEcCCCCHHH
Confidence 46788899875 3 34555555676 89999997 443323322211 347789998865431
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
-....-..+|+||+-. ........+....+-+.|...++
T Consensus 64 l~~a~i~~ad~vi~~~------~~d~~n~~~~~~a~~~~~~~~ii 102 (153)
T 1id1_A 64 LKKAGIDRCRAILALS------DNDADNAFVVLSAKDMSSDVKTV 102 (153)
T ss_dssp HHHHTTTTCSEEEECS------SCHHHHHHHHHHHHHHTSSSCEE
T ss_pred HHHcChhhCCEEEEec------CChHHHHHHHHHHHHHCCCCEEE
Confidence 1111235799998632 11223334444455566665665
No 425
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.95 E-value=1.8 Score=44.37 Aligned_cols=89 Identities=10% Similarity=0.076 Sum_probs=58.8
Q ss_pred CCEEEEECCCc-c-hHHHHHHHcCCC-eEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc-cc
Q 006731 298 GAVVMDIGCGT-G-ILSLFAAQAGAS-RVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE-LG 373 (633)
Q Consensus 298 ~~~VLDVGcGt-G-~lsl~~a~aGa~-~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~-l~ 373 (633)
.++|.-||+|. | .++..++++|.. +|+++|.++..++.+++ .|.. .. ...+..+ ..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~-------------~~---~~~~~~~~~~ 92 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGII-------------DE---GTTSIAKVED 92 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSC-------------SE---EESCTTGGGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCc-------------ch---hcCCHHHHhh
Confidence 36899999997 3 567777777863 89999999977655542 3331 11 2233333 22
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
...|+||.-. .......++..+...|+||.+++
T Consensus 93 -------~~aDvVilav------p~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 93 -------FSPDFVMLSS------PVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp -------GCCSEEEECS------CGGGHHHHHHHHHHHSCTTCEEE
T ss_pred -------ccCCEEEEeC------CHHHHHHHHHHHhhccCCCcEEE
Confidence 4689998532 23345677888888899887665
No 426
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.95 E-value=0.32 Score=51.07 Aligned_cols=44 Identities=20% Similarity=0.197 Sum_probs=32.2
Q ss_pred CCCCEEEEECCCc-chHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHH
Q 006731 296 MKGAVVMDIGCGT-GILSLFAAQ-AGASRVIAVEASEKMAAVATQIA 340 (633)
Q Consensus 296 ~~~~~VLDVGcGt-G~lsl~~a~-aGa~~V~aVD~S~~~~~~A~~~~ 340 (633)
.++++||-+|+|. |.....+++ .|+ +|+++|.++..++.+++..
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~ 210 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLF 210 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhh
Confidence 3458999999985 555444444 488 9999999998776666544
No 427
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=88.75 E-value=2.2 Score=42.94 Aligned_cols=109 Identities=27% Similarity=0.295 Sum_probs=67.1
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHH-HHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccc
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEK-MAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~-~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e 370 (633)
..++++||-.|++.|+ ++..+++.|+ +|+.++.+.. ..+.+.+.+...+ .++.++.+|+.
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~---------------~~~~~~~~Dv~ 107 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEG---------------VKCVLLPGDLS 107 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTT---------------CCEEEEESCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcC---------------CcEEEEECCCC
Confidence 3578999999998774 5666777798 8999998754 3434444444433 56899999998
Q ss_pred cccccccc------CCCcccEEEEec-cccc---c--cChhhH-----------HHHHHHHhhcccCCcEEE
Q 006731 371 ELGESMQI------QPHSVDVLVSEW-MGYC---L--LYESML-----------SSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 371 ~l~~~~~l------~~~~~DvIvse~-mg~~---L--~~e~~l-----------~~vl~a~~r~LkpgG~li 419 (633)
+...-..+ ..+++|++|.+. .... + .....+ -.+.+++.+.++++|.++
T Consensus 108 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv 179 (291)
T 3ijr_A 108 DEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVII 179 (291)
T ss_dssp SHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEE
Confidence 75311000 014799999763 1110 0 011111 134566677778888766
No 428
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.68 E-value=2.5 Score=42.58 Aligned_cols=78 Identities=18% Similarity=0.229 Sum_probs=53.6
Q ss_pred CCCCCEEEEECCC--cch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccc
Q 006731 295 LMKGAVVMDIGCG--TGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (633)
Q Consensus 295 ~~~~~~VLDVGcG--tG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~ 369 (633)
..++++||-.|++ .|+ ++..+++.|+ +|+.++.++...+.+.+..... .++.++.+|+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~Dv 90 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEEL----------------GAFVAGHCDV 90 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHH----------------TCEEEEECCT
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhc----------------CCceEEECCC
Confidence 4678999999987 443 6677778898 7999999976655555554432 3578899998
Q ss_pred ccccccccc------CCCcccEEEEe
Q 006731 370 EELGESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 370 e~l~~~~~l------~~~~~DvIvse 389 (633)
.+...-..+ ..+++|++|.+
T Consensus 91 ~d~~~v~~~~~~~~~~~g~iD~lVnn 116 (293)
T 3grk_A 91 ADAASIDAVFETLEKKWGKLDFLVHA 116 (293)
T ss_dssp TCHHHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 875411000 12479999976
No 429
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.55 E-value=0.2 Score=51.61 Aligned_cols=101 Identities=21% Similarity=0.296 Sum_probs=59.4
Q ss_pred HHhCCCCCCCCEEEEECC--CcchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 289 ILENPSLMKGAVVMDIGC--GTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGc--GtG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
+.+...+.++++||-.|+ |.|.....+++. |+ +|++++.++..++.+++. |. +. ++
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~----g~--------------~~--~~ 195 (333)
T 1wly_A 137 LHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKL----GC--------------HH--TI 195 (333)
T ss_dssp HHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TC--------------SE--EE
T ss_pred HHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CC--------------CE--EE
Confidence 434446778999999996 346665555554 88 899999998776666542 32 21 12
Q ss_pred Ecccccccccc-c-cCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 QGMVEELGESM-Q-IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 ~gd~e~l~~~~-~-l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
...-.++.... . .....+|+||.. .|. ..+....+.|+++|+++.
T Consensus 196 d~~~~~~~~~i~~~~~~~~~d~vi~~-~g~---------~~~~~~~~~l~~~G~iv~ 242 (333)
T 1wly_A 196 NYSTQDFAEVVREITGGKGVDVVYDS-IGK---------DTLQKSLDCLRPRGMCAA 242 (333)
T ss_dssp ETTTSCHHHHHHHHHTTCCEEEEEEC-SCT---------TTHHHHHHTEEEEEEEEE
T ss_pred ECCCHHHHHHHHHHhCCCCCeEEEEC-CcH---------HHHHHHHHhhccCCEEEE
Confidence 21111111000 0 112469999853 221 134555678999999873
No 430
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=88.42 E-value=0.8 Score=47.80 Aligned_cols=90 Identities=16% Similarity=0.134 Sum_probs=54.4
Q ss_pred CCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCH---HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 298 GAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASE---KMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 298 ~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~---~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
|++||-+|+|. |.++..++++ |+ +|++++.++ ...+.+++. |. +.+ ..+ ++
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~----ga--------------~~v---~~~--~~ 236 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET----KT--------------NYY---NSS--NG 236 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH----TC--------------EEE---ECT--TC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh----CC--------------cee---chH--HH
Confidence 89999999964 6666666665 88 999999987 655555542 32 222 111 21
Q ss_pred ccccccCCCcccEEEEecccccccChhhHHHHH-HHHhhcccCCcEEEe
Q 006731 373 GESMQIQPHSVDVLVSEWMGYCLLYESMLSSVL-FARDQWLKPGGAILP 420 (633)
Q Consensus 373 ~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl-~a~~r~LkpgG~lip 420 (633)
.....-....+|+|+... |. . ..+ ....+.|+++|.++.
T Consensus 237 ~~~~~~~~~~~d~vid~~-g~----~----~~~~~~~~~~l~~~G~iv~ 276 (366)
T 2cdc_A 237 YDKLKDSVGKFDVIIDAT-GA----D----VNILGNVIPLLGRNGVLGL 276 (366)
T ss_dssp SHHHHHHHCCEEEEEECC-CC----C----THHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHhCCCCCEEEECC-CC----h----HHHHHHHHHHHhcCCEEEE
Confidence 100000014699998532 21 1 133 566788999999874
No 431
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=88.15 E-value=1.2 Score=46.26 Aligned_cols=47 Identities=17% Similarity=0.167 Sum_probs=34.3
Q ss_pred hCCCCCCCCEEEEECC-C-cchHHHHHHHc-CCCeEEEEeCCHHHHHHHHH
Q 006731 291 ENPSLMKGAVVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQ 338 (633)
Q Consensus 291 ~~~~~~~~~~VLDVGc-G-tG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~ 338 (633)
....+.+|++||-.|+ | .|.....++++ |+ +|++++.++..++.+++
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 205 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEK 205 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 3445778999999995 3 36665555554 87 89999999887766643
No 432
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=88.10 E-value=0.27 Score=46.02 Aligned_cols=77 Identities=21% Similarity=0.275 Sum_probs=40.1
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhccc--ccccccCCccCCHHHHHHHHH
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNHLH 122 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~--~~C~~C~~~~~~~~~~~~Hm~ 122 (633)
.+..|-.|+..|.+...+..||+..++-.... ...=+.-|...-.|..-++..... ..|..||+.|.....|..||+
T Consensus 76 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~ 154 (190)
T 2i13_A 76 KPYKCPECGKSFSQRANLRAHQRTHTGEKPYA-CPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR 154 (190)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHHHHTCCCEE-CTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH
T ss_pred CCccCcccCCccCCHHHHHHHHHhcCCCCCCc-CCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHH
Confidence 45677777777777777777777655421000 000011222222233333333222 237777777777677777775
No 433
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.07 E-value=3.9 Score=35.35 Aligned_cols=71 Identities=14% Similarity=0.282 Sum_probs=41.9
Q ss_pred CCEEEEECCCc-c-hHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 298 GAVVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 298 ~~~VLDVGcGt-G-~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
+.+|+-+|+|. | .++..+++.|. +|+++|.++..++.+++ .. .+.++.++..+....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~---~~-----------------~~~~~~~d~~~~~~l 62 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASA---EI-----------------DALVINGDCTKIKTL 62 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH---HC-----------------SSEEEESCTTSHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHH---hc-----------------CcEEEEcCCCCHHHH
Confidence 46899999875 3 34455556676 89999999876543332 11 244567766543210
Q ss_pred cccCCCcccEEEEe
Q 006731 376 MQIQPHSVDVLVSE 389 (633)
Q Consensus 376 ~~l~~~~~DvIvse 389 (633)
.......+|+|+..
T Consensus 63 ~~~~~~~~d~vi~~ 76 (140)
T 1lss_A 63 EDAGIEDADMYIAV 76 (140)
T ss_dssp HHTTTTTCSEEEEC
T ss_pred HHcCcccCCEEEEe
Confidence 00112579999864
No 434
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=87.98 E-value=2.2 Score=43.07 Aligned_cols=77 Identities=21% Similarity=0.201 Sum_probs=52.2
Q ss_pred CCCCEEEEECCCc--ch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccc
Q 006731 296 MKGAVVMDIGCGT--GI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (633)
Q Consensus 296 ~~~~~VLDVGcGt--G~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e 370 (633)
..+++||-.|++. |+ ++..+++.|+ +|+.++.++...+.+.+..... ..+.++.+|+.
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~Dv~ 90 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESL----------------GVKLTVPCDVS 90 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHH----------------TCCEEEECCTT
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhc----------------CCeEEEEcCCC
Confidence 5689999999864 54 6777778898 8999999876555555544433 33678899988
Q ss_pred cccccccc------CCCcccEEEEe
Q 006731 371 ELGESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 371 ~l~~~~~l------~~~~~DvIvse 389 (633)
+...-..+ ..+++|++|.+
T Consensus 91 d~~~v~~~~~~~~~~~g~iD~lVnn 115 (296)
T 3k31_A 91 DAESVDNMFKVLAEEWGSLDFVVHA 115 (296)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 75411000 01478999976
No 435
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=87.97 E-value=2.5 Score=44.49 Aligned_cols=96 Identities=14% Similarity=0.073 Sum_probs=68.7
Q ss_pred CCCEEEEECCCcchHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
.+..||.||.+.|.|+..++.. .++.+.-|-.....++.+++.|++.. ..+++... .++
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~------------~~~~~~~~-~~~----- 96 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDE------------SSVKFLDS-TAD----- 96 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCG------------GGSEEEET-TSC-----
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCc------------cceEeccc-ccc-----
Confidence 4568999999999999888754 45667657777777888999999851 34666533 222
Q ss_pred ccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 377 ~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
+...+|+|+.-+. -.-..+...|..+...|+||+.++
T Consensus 97 --~~~~~~~v~~~lp----k~~~~l~~~L~~l~~~l~~~~~i~ 133 (375)
T 4dcm_A 97 --YPQQPGVVLIKVP----KTLALLEQQLRALRKVVTSDTRII 133 (375)
T ss_dssp --CCSSCSEEEEECC----SCHHHHHHHHHHHHTTCCTTSEEE
T ss_pred --cccCCCEEEEEcC----CCHHHHHHHHHHHHhhCCCCCEEE
Confidence 2368999986432 233456677888889999999886
No 436
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=87.96 E-value=0.3 Score=41.69 Aligned_cols=55 Identities=18% Similarity=0.315 Sum_probs=42.8
Q ss_pred CCCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHH
Q 006731 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHL 121 (633)
Q Consensus 44 ~~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm 121 (633)
..+..|-.|++.|.....+..||+..|.-.. + .....|-.||+.|.....|..||
T Consensus 16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~-------~----------------ekpf~C~~Cgk~F~~~~~L~~H~ 70 (102)
T 2ghf_A 16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVV-------L----------------NSSYVCVECNFLTKRYDALSEHN 70 (102)
T ss_dssp CSSEECSSCSCEESCHHHHHHHHHHHCSSCC-------C----------------SCCEEETTTTEEESSTHHHHTHH
T ss_pred CcCcCCCCCCCccCCHHHHHHHHHhhCCCCC-------C----------------CCCcCCCCCCcccCCHHHHHHHH
Confidence 4679999999999999999999987662100 0 01135999999999989999994
No 437
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=87.90 E-value=0.44 Score=41.45 Aligned_cols=51 Identities=25% Similarity=0.474 Sum_probs=39.7
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~C~~~~~~~~~~~~Hm~~~ 124 (633)
.+..|-.|++.|.....+..||+. | . ....|..||+.|.....|..||+..
T Consensus 73 ~~~~C~~C~k~f~~~~~l~~H~~~-H----~------------------------~~~~C~~C~k~f~~~~~l~~H~~~h 123 (129)
T 2wbt_A 73 SQFVCPLCLMPFSSSVSLKQHIRY-T----E------------------------HTKVCPVCKKEFTSTDSALDHVCKK 123 (129)
T ss_dssp CSEECTTTCCEESSHHHHHHHHHH-T----C------------------------CCCBCTTTCCBCSSHHHHHHHHHHT
T ss_pred CCeECCCCCcccCCHhHHHHHHHH-C----C------------------------CCCCCCCCCcccCCHHHHHHHHHHH
Confidence 467888888888888888888864 4 1 1136999999999999999999753
No 438
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=87.81 E-value=0.68 Score=47.49 Aligned_cols=96 Identities=18% Similarity=0.140 Sum_probs=57.0
Q ss_pred CCCCCC-EEEEECC-Cc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccc
Q 006731 294 SLMKGA-VVMDIGC-GT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (633)
Q Consensus 294 ~~~~~~-~VLDVGc-Gt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~ 369 (633)
.+.++. +||-+|+ |. |.++..++++ |+ +|++++.++..++.+++ .|. +. ++..+-
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~----lGa--------------~~--v~~~~~ 204 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQ----LGA--------------SE--VISRED 204 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHH----HTC--------------SE--EEEHHH
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCC--------------cE--EEECCC
Confidence 345664 8999998 43 7777777776 88 79999998766666654 233 22 222111
Q ss_pred cccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 370 EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 370 e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
.+......+....+|+|+-. .| . ..+....+.|+++|+++.
T Consensus 205 ~~~~~~~~~~~~~~d~vid~-~g----~-----~~~~~~~~~l~~~G~iv~ 245 (330)
T 1tt7_A 205 VYDGTLKALSKQQWQGAVDP-VG----G-----KQLASLLSKIQYGGSVAV 245 (330)
T ss_dssp HCSSCCCSSCCCCEEEEEES-CC----T-----HHHHHHHTTEEEEEEEEE
T ss_pred chHHHHHHhhcCCccEEEEC-Cc----H-----HHHHHHHHhhcCCCEEEE
Confidence 10000001223579999842 22 1 135566788999999874
No 439
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=87.77 E-value=0.5 Score=48.10 Aligned_cols=63 Identities=27% Similarity=0.306 Sum_probs=43.5
Q ss_pred CcEEEEEccccccccccccCCCcccEEEEeccccccc---------------Ch---hhHHHHHHHHhhcccCCcEEEee
Q 006731 360 GKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLL---------------YE---SMLSSVLFARDQWLKPGGAILPD 421 (633)
Q Consensus 360 ~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~---------------~e---~~l~~vl~a~~r~LkpgG~lip~ 421 (633)
.++++++||..++... +++++||+||+++. |... ++ ..+..++.++.++|||||.++..
T Consensus 20 ~~~~i~~gD~~~~l~~--l~~~s~DlIvtdPP-Y~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 20 GVHRLHVGDAREVLAS--FPEASVHLVVTSPP-YWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp -CEEEEESCHHHHHTT--SCTTCEEEEEECCC-CCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhh--CCCCceeEEEECCC-CCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 5689999999884321 45689999999863 3211 11 12346778889999999999866
Q ss_pred ccee
Q 006731 422 TATM 425 (633)
Q Consensus 422 ~~t~ 425 (633)
....
T Consensus 97 ~~d~ 100 (297)
T 2zig_A 97 VGDV 100 (297)
T ss_dssp ECCE
T ss_pred ECCC
Confidence 5543
No 440
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=87.76 E-value=0.41 Score=34.96 Aligned_cols=28 Identities=29% Similarity=0.590 Sum_probs=24.6
Q ss_pred CCCceeecCCCCCCCHHHHHHHhhhhcC
Q 006731 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHC 71 (633)
Q Consensus 44 ~~~~~CLFC~~~~~~~~~~l~Hm~~~H~ 71 (633)
..+..|-.|++.|.....+..||+..|.
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~ 37 (54)
T 2eps_A 10 GKPYICQSCGKGFSRPDHLNGHIKQVHT 37 (54)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHhcC
Confidence 3578999999999999999999986663
No 441
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=87.61 E-value=0.17 Score=66.14 Aligned_cols=115 Identities=17% Similarity=0.053 Sum_probs=52.4
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcchHHHHHHHc-C-----CCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-----ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNIN 357 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~lsl~~a~a-G-----a~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~ 357 (633)
.+.+.+.... ..+..+||+||.|+|.++..+.+. + ...++..|+|+...+.|++.++...
T Consensus 1228 ~~~~~~~~~~-~~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d------------- 1293 (2512)
T 2vz8_A 1228 ACVDTALENM-ASPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH------------- 1293 (2512)
T ss_dssp HHHHHHHTTS-SSSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT-------------
T ss_pred HHHHHHHhcC-CCCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc-------------
Confidence 4555554432 135679999999999665444332 2 2378889999877766666554311
Q ss_pred CCCcEEEEEccccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeec
Q 006731 358 NAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 358 ~~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+..-.-+..+.. .+....||+||+..+ |.....+...+..+.++|||||.++...
T Consensus 1294 ----i~~~~~d~~~~~---~~~~~~ydlvia~~v---l~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1294 ----VTQGQWDPANPA---PGSLGKADLLVCNCA---LATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp ----EEEECCCSSCCC---C-----CCEEEEECC-----------------------CCEEEEEE
T ss_pred ----cccccccccccc---cCCCCceeEEEEccc---ccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 211111221110 012457999997532 3333456778888999999999988653
No 442
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=87.51 E-value=0.28 Score=38.91 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=39.2
Q ss_pred cee--ecCCCCCCCHHHHHHHhhhhcCcchhhhhcc--ccccccCceeeehhhHhhcccccccc---cCCccCCHHHHHH
Q 006731 47 FLC--LFCDAGYSSCDTLFEHCRLSHCFDFHSVKTE--LRLDFYGSFKLINYIRSQVAENRCWI---CGLTCQSNQDLQN 119 (633)
Q Consensus 47 ~~C--LFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~--~~ld~Y~~IKlINyiR~~~~~~~C~~---C~~~~~~~~~~~~ 119 (633)
..| -.|+..|.+...+..||+..++-- ...... =+.-|...-.|..-+|.... ..|.. |++.|.....|..
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~-~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~C~~~~~C~~~f~~~~~l~~ 79 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQL-PYECPHEGCDKRFSLPSRLKRHEKVHAG-YPCKKDDSCSFVGKTWTLYLK 79 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHHHHTTC-CEECCSTTCCCEESSHHHHHHHHHHHHS-EECCSCSSCCCEESSHHHHHH
T ss_pred ccCCCCCCCcccCCHHHHHHHHHHhCCCC-CeeCCCCCCcCccCCHHHHHHHHHHhCC-CCCCCCCCCCCccCCHHHHHH
Confidence 457 668888888888888876544310 000000 11122222223333333332 45777 8887777777777
Q ss_pred HHH
Q 006731 120 HLH 122 (633)
Q Consensus 120 Hm~ 122 (633)
||+
T Consensus 80 H~~ 82 (85)
T 2j7j_A 80 HVA 82 (85)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
No 443
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=87.44 E-value=1.8 Score=47.50 Aligned_cols=42 Identities=33% Similarity=0.304 Sum_probs=31.7
Q ss_pred CCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHH
Q 006731 295 LMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVAT 337 (633)
Q Consensus 295 ~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~ 337 (633)
..+|++|+-+|+|. |.....++++ |+ +|+++|.++..+..|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~ 314 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAM 314 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 56899999999986 6554444444 87 9999999997665554
No 444
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=87.38 E-value=1.1 Score=40.45 Aligned_cols=38 Identities=26% Similarity=0.485 Sum_probs=27.8
Q ss_pred CCCCCEEEEECCCc-ch-HHHHHHHcCCCeEEEEeCCHHHH
Q 006731 295 LMKGAVVMDIGCGT-GI-LSLFAAQAGASRVIAVEASEKMA 333 (633)
Q Consensus 295 ~~~~~~VLDVGcGt-G~-lsl~~a~aGa~~V~aVD~S~~~~ 333 (633)
..++++|+-+|+|. |. ++..+.+.|. +|+++|.++..+
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~ 55 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAF 55 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGG
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHH
Confidence 35678999999986 53 4555555687 899999987654
No 445
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.38 E-value=0.4 Score=50.67 Aligned_cols=42 Identities=26% Similarity=0.257 Sum_probs=30.8
Q ss_pred CCCCEEEEECCCc-chHHHHHHH-cCCCeEEEEeCCHHHHHHHHH
Q 006731 296 MKGAVVMDIGCGT-GILSLFAAQ-AGASRVIAVEASEKMAAVATQ 338 (633)
Q Consensus 296 ~~~~~VLDVGcGt-G~lsl~~a~-aGa~~V~aVD~S~~~~~~A~~ 338 (633)
.++++|+-+|+|. |......++ .|+ +|+++|.++..++.+++
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~ 209 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDA 209 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHH
Confidence 5689999999976 554444443 488 89999999987655554
No 446
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=87.17 E-value=2.2 Score=42.60 Aligned_cols=80 Identities=14% Similarity=0.124 Sum_probs=54.5
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeC-CHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccc
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEA-SEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~-S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e 370 (633)
...+++||-.|++.|+ ++..+++.|+ +|+.++. ++..++...+.+...+ .++.++++|+.
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~Dv~ 89 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLG---------------ARVIFLRADLA 89 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTT---------------CCEEEEECCTT
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcC---------------CcEEEEEecCC
Confidence 4578999999998874 5666777798 8999985 6655544444444433 56899999998
Q ss_pred cccccccc------CCCcccEEEEec
Q 006731 371 ELGESMQI------QPHSVDVLVSEW 390 (633)
Q Consensus 371 ~l~~~~~l------~~~~~DvIvse~ 390 (633)
+...-..+ ..+++|++|.+.
T Consensus 90 d~~~v~~~~~~~~~~~g~iD~lvnnA 115 (280)
T 4da9_A 90 DLSSHQATVDAVVAEFGRIDCLVNNA 115 (280)
T ss_dssp SGGGHHHHHHHHHHHHSCCCEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 75421100 013799999763
No 447
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=86.57 E-value=1 Score=51.11 Aligned_cols=123 Identities=21% Similarity=0.151 Sum_probs=69.9
Q ss_pred CCCEEEEECCCcchHHHHHHHcC-----------C--CeEEEEeC---CHHHHHHHH-----------HHHHhCCCCCCC
Q 006731 297 KGAVVMDIGCGTGILSLFAAQAG-----------A--SRVIAVEA---SEKMAAVAT-----------QIAKDNDFWWDR 349 (633)
Q Consensus 297 ~~~~VLDVGcGtG~lsl~~a~aG-----------a--~~V~aVD~---S~~~~~~A~-----------~~~~~ngl~~~~ 349 (633)
+.-+|||+|-|||+..+.+.++- . -+++++|. +...+..+. +........ .
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~--~ 143 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMP--L 143 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCC--C
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCccc--C
Confidence 34689999999997655554431 1 25899999 665554332 222211100 0
Q ss_pred CCCC--CCCCCCCcEEEEEcccccccccccc-CCCcccEEEEecccccccChhh-HHHHHHHHhhcccCCcEEEeec
Q 006731 350 PQSE--GNINNAGKMEVVQGMVEELGESMQI-QPHSVDVLVSEWMGYCLLYESM-LSSVLFARDQWLKPGGAILPDT 422 (633)
Q Consensus 350 ~~~~--~~~~~~~~I~vi~gd~e~l~~~~~l-~~~~~DvIvse~mg~~L~~e~~-l~~vl~a~~r~LkpgG~lip~~ 422 (633)
+..- ......-.++++.||+.+.-..... ....||+|+...+..... ..| -..++..+.++++|||.+...+
T Consensus 144 ~~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~n-p~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 144 PGCHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKN-PDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp SEEEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGC-GGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred CCceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCC-hhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 0000 0001124577888988775422111 136799999765433222 223 3568889999999999987544
No 448
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.55 E-value=0.74 Score=48.41 Aligned_cols=99 Identities=18% Similarity=0.179 Sum_probs=53.8
Q ss_pred CCCCEEEEECCCc-chHH-HHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 296 MKGAVVMDIGCGT-GILS-LFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 296 ~~~~~VLDVGcGt-G~ls-l~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
.++++|+-+|+|. |... ..++..|+ +|+++|.++..++.+++.. + ..+.....+..++.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~---g---------------~~~~~~~~~~~~l~ 224 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVF---G---------------GRVITLTATEANIK 224 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT---T---------------TSEEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhc---C---------------ceEEEecCCHHHHH
Confidence 4679999999974 4433 33344588 8999999987665554322 2 22333322333332
Q ss_pred cccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 374 ~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
. . -..+|+||... +.. .......+.....+.++|||.++-
T Consensus 225 ~---~-~~~~DvVi~~~-g~~--~~~~~~li~~~~l~~mk~gg~iV~ 264 (369)
T 2eez_A 225 K---S-VQHADLLIGAV-LVP--GAKAPKLVTRDMLSLMKEGAVIVD 264 (369)
T ss_dssp H---H-HHHCSEEEECC-C---------CCSCHHHHTTSCTTCEEEE
T ss_pred H---H-HhCCCEEEECC-CCC--ccccchhHHHHHHHhhcCCCEEEE
Confidence 1 1 14699998632 110 000001123445577899998773
No 449
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=86.42 E-value=1.7 Score=42.64 Aligned_cols=78 Identities=18% Similarity=0.197 Sum_probs=53.1
Q ss_pred CCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.++++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~ 70 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKG---------------FKVEASVCDLSSR 70 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CEEEEEECCTTCH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CcEEEEEcCCCCH
Confidence 568999999988764 5566667788 89999999876655444444332 5688999998775
Q ss_pred cccccc------CC-CcccEEEEe
Q 006731 373 GESMQI------QP-HSVDVLVSE 389 (633)
Q Consensus 373 ~~~~~l------~~-~~~DvIvse 389 (633)
..-..+ .. +++|++|.+
T Consensus 71 ~~~~~~~~~~~~~~~g~id~lv~~ 94 (260)
T 2ae2_A 71 SERQELMNTVANHFHGKLNILVNN 94 (260)
T ss_dssp HHHHHHHHHHHHHTTTCCCEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCCEEEEC
Confidence 311000 01 579999976
No 450
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=86.35 E-value=1.8 Score=43.04 Aligned_cols=79 Identities=22% Similarity=0.211 Sum_probs=53.9
Q ss_pred CCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.++++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~ 82 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKG---------------LNVEGSVCDLLSR 82 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CCEEEEECCTTCH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CceEEEECCCCCH
Confidence 568999999988764 5666667798 89999999876655544444333 4688899998764
Q ss_pred cccccc------C-CCcccEEEEec
Q 006731 373 GESMQI------Q-PHSVDVLVSEW 390 (633)
Q Consensus 373 ~~~~~l------~-~~~~DvIvse~ 390 (633)
..-..+ . .+++|++|.+.
T Consensus 83 ~~~~~~~~~~~~~~~g~id~lv~nA 107 (273)
T 1ae1_A 83 TERDKLMQTVAHVFDGKLNILVNNA 107 (273)
T ss_dssp HHHHHHHHHHHHHTTSCCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCcEEEECC
Confidence 311000 0 15799999863
No 451
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=86.34 E-value=0.4 Score=44.76 Aligned_cols=78 Identities=21% Similarity=0.238 Sum_probs=51.1
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhccc--ccccccCCccCCHHHHHHHHH
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNHLH 122 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~--~~C~~C~~~~~~~~~~~~Hm~ 122 (633)
.+..|-.|+..|.+...+..||+..++-.... ...=+.-|...-.|..-++..... ..|..|++.|.....|..||.
T Consensus 48 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~ 126 (190)
T 2i13_A 48 KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYK-CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR 126 (190)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHHCCCCEE-CTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHH
T ss_pred CCccCCCcCchhCCHHHHHHHHHhcCCCCCcc-CcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH
Confidence 57899999999999999999999776521100 011122222223344444443322 349999999999899999997
Q ss_pred H
Q 006731 123 E 123 (633)
Q Consensus 123 ~ 123 (633)
.
T Consensus 127 ~ 127 (190)
T 2i13_A 127 T 127 (190)
T ss_dssp H
T ss_pred H
Confidence 4
No 452
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=86.20 E-value=1.1 Score=45.44 Aligned_cols=56 Identities=14% Similarity=0.288 Sum_probs=37.5
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHH
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIA 340 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~ 340 (633)
.+..++.......++++||-+|+| |. .+..+++.|+++|+.++.++...+...+.+
T Consensus 113 G~~~~l~~~~~~l~~k~vlVlGaG-G~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~ 171 (283)
T 3jyo_A 113 GFGRGMEEGLPNAKLDSVVQVGAG-GVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_dssp HHHHHHHHHCTTCCCSEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCcCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Confidence 345555544345678999999998 42 345566679988999999986554333333
No 453
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=86.09 E-value=0.35 Score=41.63 Aligned_cols=19 Identities=26% Similarity=0.672 Sum_probs=10.6
Q ss_pred ccc--cCCccCCHHHHHHHHH
Q 006731 104 CWI--CGLTCQSNQDLQNHLH 122 (633)
Q Consensus 104 C~~--C~~~~~~~~~~~~Hm~ 122 (633)
|.+ |++.|.....|..||+
T Consensus 65 C~~~~C~~~f~~~~~l~~H~~ 85 (124)
T 1ubd_C 65 CTFEGCGKRFSLDFNLRTHVR 85 (124)
T ss_dssp CCSTTCCCEESCHHHHHHHHH
T ss_pred CCCCCCcCccCCHHHHHHHHH
Confidence 544 5555555555555554
No 454
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=85.88 E-value=0.84 Score=40.76 Aligned_cols=79 Identities=18% Similarity=0.265 Sum_probs=48.0
Q ss_pred CCceeecCCCCCCCHHHHHHHhhhhcCc--chhhhhcc-----ccccccCceeeehhhHhhcc--cccccc--cCCccCC
Q 006731 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCF--DFHSVKTE-----LRLDFYGSFKLINYIRSQVA--ENRCWI--CGLTCQS 113 (633)
Q Consensus 45 ~~~~CLFC~~~~~~~~~~l~Hm~~~H~F--d~~~~~~~-----~~ld~Y~~IKlINyiR~~~~--~~~C~~--C~~~~~~ 113 (633)
.+..|-.|+..|.+...+..||+..|.- .-...... -+.-|...-.|..-++.... ...|.+ |++.|.+
T Consensus 2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~ 81 (155)
T 2gli_A 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR 81 (155)
T ss_dssp CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence 3578999999999999999999974421 11100000 00112222223334444332 234986 9999999
Q ss_pred HHHHHHHHHH
Q 006731 114 NQDLQNHLHE 123 (633)
Q Consensus 114 ~~~~~~Hm~~ 123 (633)
...|..||+.
T Consensus 82 ~~~l~~H~~~ 91 (155)
T 2gli_A 82 LENLKTHLRS 91 (155)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8999999964
No 455
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=85.75 E-value=0.82 Score=46.81 Aligned_cols=94 Identities=18% Similarity=0.118 Sum_probs=55.4
Q ss_pred CCCCCC-EEEEECC-C-cchHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEc-c
Q 006731 294 SLMKGA-VVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG-M 368 (633)
Q Consensus 294 ~~~~~~-~VLDVGc-G-tG~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~g-d 368 (633)
.+.++. +||-+|+ | .|.++..++++ |+ +|++++.++.-++.+++ .|.. .+ +.. +
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~----lGa~--------------~~--i~~~~ 203 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRV----LGAK--------------EV--LARED 203 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHH----TTCS--------------EE--EECC-
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH----cCCc--------------EE--EecCC
Confidence 355664 8999998 4 37777777776 87 79999998766656543 3432 11 111 1
Q ss_pred c-cccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 369 V-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 369 ~-e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
. .+.. ..+....+|+|+-. .|. . .+....+.|+++|+++.
T Consensus 204 ~~~~~~--~~~~~~~~d~vid~-~g~-----~----~~~~~~~~l~~~G~~v~ 244 (328)
T 1xa0_A 204 VMAERI--RPLDKQRWAAAVDP-VGG-----R----TLATVLSRMRYGGAVAV 244 (328)
T ss_dssp ----------CCSCCEEEEEEC-STT-----T----THHHHHHTEEEEEEEEE
T ss_pred cHHHHH--HHhcCCcccEEEEC-CcH-----H----HHHHHHHhhccCCEEEE
Confidence 1 0100 00223579999842 221 1 23455678999999873
No 456
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=85.55 E-value=3.5 Score=44.44 Aligned_cols=38 Identities=34% Similarity=0.384 Sum_probs=29.2
Q ss_pred CCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHH
Q 006731 295 LMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMA 333 (633)
Q Consensus 295 ~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~ 333 (633)
...|++|+-+|+|. |......+++ |+ +|+++|.++...
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a 283 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICA 283 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHH
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchh
Confidence 57899999999997 6544444444 88 899999998643
No 457
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.46 E-value=0.3 Score=37.33 Aligned_cols=50 Identities=24% Similarity=0.425 Sum_probs=40.4
Q ss_pred CCCceeecCCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhccccccc-ccCCccCCHHHHHHHHH
Q 006731 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCW-ICGLTCQSNQDLQNHLH 122 (633)
Q Consensus 44 ~~~~~CLFC~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~-~C~~~~~~~~~~~~Hm~ 122 (633)
..+..|-+|++.|. ...+..||+. .+- ....|. .||+.|.....|..||+
T Consensus 8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~---------------------------~p~~C~~~C~k~f~~~~~L~~H~~ 58 (66)
T 2eod_A 8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPR---------------------------LPVACPNQCGVGTVAREDLPGHLK 58 (66)
T ss_dssp CCEEECSSSCCEEE-HHHHHHHHHH-CSS---------------------------SEEECTTCCSCCEEETTTHHHHHH
T ss_pred CCCeeccccCCccC-HHHHHHHHHH-cCC---------------------------cCccCCcccCcccccHHHHHHHHH
Confidence 46799999999999 9999999975 321 013588 89999988789999996
No 458
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=85.41 E-value=2.6 Score=41.74 Aligned_cols=77 Identities=18% Similarity=0.263 Sum_probs=54.0
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
.++|+++|--|++.|+ .+..+++.|+ +|+.+|.+.. +.+.+.++..+ .++.++++|+.+
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~--~~~~~~~~~~g---------------~~~~~~~~Dv~d 67 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAP--DETLDIIAKDG---------------GNASALLIDFAD 67 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCC--HHHHHHHHHTT---------------CCEEEEECCTTS
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcH--HHHHHHHHHhC---------------CcEEEEEccCCC
Confidence 4689999999999985 6777888899 8999998753 22333444444 568889999876
Q ss_pred ccccc-ccCCCcccEEEEe
Q 006731 372 LGESM-QIQPHSVDVLVSE 389 (633)
Q Consensus 372 l~~~~-~l~~~~~DvIvse 389 (633)
..... .+..+++|++|.+
T Consensus 68 ~~~v~~~~~~g~iDiLVNN 86 (247)
T 4hp8_A 68 PLAAKDSFTDAGFDILVNN 86 (247)
T ss_dssp TTTTTTSSTTTCCCEEEEC
T ss_pred HHHHHHHHHhCCCCEEEEC
Confidence 43211 1234689999976
No 459
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=85.35 E-value=0.67 Score=35.71 Aligned_cols=52 Identities=19% Similarity=0.328 Sum_probs=41.6
Q ss_pred CCCceeec--CCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccc--cCCccCCHHHHHH
Q 006731 44 ESGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWI--CGLTCQSNQDLQN 119 (633)
Q Consensus 44 ~~~~~CLF--C~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~--C~~~~~~~~~~~~ 119 (633)
..+..|-. |++.|.....+..||+..++- ....|.+ |++.|.....|..
T Consensus 15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~---------------------------~~~~C~~~~C~k~f~~~~~l~~ 67 (72)
T 2epa_A 15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGE---------------------------KPFSCSWKGCERRFARSDELSR 67 (72)
T ss_dssp CCCEECSSTTTCCEESSHHHHHHHHHHHSSS---------------------------CSEECCCTTCCCEESSHHHHHH
T ss_pred cCceeCCCCCCccccCCHHHHHHHHHhcCCC---------------------------CCccCCCCCCCcccCCHHHHHh
Confidence 46789998 999999999999999854321 1135866 9999999899999
Q ss_pred HHH
Q 006731 120 HLH 122 (633)
Q Consensus 120 Hm~ 122 (633)
||+
T Consensus 68 H~~ 70 (72)
T 2epa_A 68 HRR 70 (72)
T ss_dssp HTT
T ss_pred Hhh
Confidence 984
No 460
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=85.20 E-value=0.87 Score=47.22 Aligned_cols=99 Identities=15% Similarity=0.137 Sum_probs=55.8
Q ss_pred HHhCCCCCCCCEEEEECC-Cc-chHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEE
Q 006731 289 ILENPSLMKGAVVMDIGC-GT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (633)
Q Consensus 289 I~~~~~~~~~~~VLDVGc-Gt-G~lsl~~a~a-Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi 365 (633)
+.+...+.+|.+||-.|+ |. |.++..+|++ |+.+|++++ ++.-.+.++ .|. +. ++
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga--------------~~--~~ 191 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSV--------------TH--LF 191 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGS--------------SE--EE
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCC--------------cE--EE
Confidence 444556788999999999 43 7778888876 567999998 443332332 333 22 22
Q ss_pred Eccccccccc-cccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 366 QGMVEELGES-MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 366 ~gd~e~l~~~-~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
. .-.++... ..+..+.+|+|+-. .|. + .+....+.|+++|+++.
T Consensus 192 ~-~~~~~~~~~~~~~~~g~Dvv~d~-~g~--------~-~~~~~~~~l~~~G~~v~ 236 (349)
T 4a27_A 192 D-RNADYVQEVKRISAEGVDIVLDC-LCG--------D-NTGKGLSLLKPLGTYIL 236 (349)
T ss_dssp E-TTSCHHHHHHHHCTTCEEEEEEE-CC----------------CTTEEEEEEEEE
T ss_pred c-CCccHHHHHHHhcCCCceEEEEC-CCc--------h-hHHHHHHHhhcCCEEEE
Confidence 2 21221100 00224679999842 221 1 12456689999999984
No 461
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=85.15 E-value=3.5 Score=40.59 Aligned_cols=80 Identities=18% Similarity=0.228 Sum_probs=57.9
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
..++++||-.|++.|+ ++..+++.|+ +|+.++.++..++.+.+.+...+ .++.++++|+.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~Dv~~ 71 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTG---------------RRALSVGTDITD 71 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CCEEEEECCTTC
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcC---------------CcEEEEEcCCCC
Confidence 4678999999999874 5677777898 89999999877766666655543 568999999987
Q ss_pred ccccccc------CCCcccEEEEec
Q 006731 372 LGESMQI------QPHSVDVLVSEW 390 (633)
Q Consensus 372 l~~~~~l------~~~~~DvIvse~ 390 (633)
...-..+ ..+++|++|.+.
T Consensus 72 ~~~v~~~~~~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 72 DAQVAHLVDETMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCcEEEECC
Confidence 5411000 124799999763
No 462
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=85.15 E-value=1.2 Score=44.36 Aligned_cols=78 Identities=21% Similarity=0.213 Sum_probs=58.4
Q ss_pred CCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
++|+++|--|++.|+ .+..+++.|+ +|+.+|.++..++.+.+.+...+ .++..+++|+.+.
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g---------------~~~~~~~~Dv~~~ 70 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKG---------------YDAHGVAFDVTDE 70 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT---------------CCEEECCCCTTCH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC---------------CcEEEEEeeCCCH
Confidence 689999999999885 6777788899 89999999887766666666655 4688888888764
Q ss_pred ccc------cccCCCcccEEEEe
Q 006731 373 GES------MQIQPHSVDVLVSE 389 (633)
Q Consensus 373 ~~~------~~l~~~~~DvIvse 389 (633)
..- ..-..++.|++|.+
T Consensus 71 ~~v~~~~~~~~~~~G~iDiLVNN 93 (255)
T 4g81_D 71 LAIEAAFSKLDAEGIHVDILINN 93 (255)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEEC
T ss_pred HHHHHHHHHHHHHCCCCcEEEEC
Confidence 311 00123689999986
No 463
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=85.11 E-value=0.47 Score=40.27 Aligned_cols=77 Identities=22% Similarity=0.310 Sum_probs=49.8
Q ss_pred CCceeec--CCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhccc--ccc--cccCCccCCHHHHH
Q 006731 45 SGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRC--WICGLTCQSNQDLQ 118 (633)
Q Consensus 45 ~~~~CLF--C~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~--~~C--~~C~~~~~~~~~~~ 118 (633)
.+..|-+ |+..|.+...+..||+..++-... ....=+.-|...-.|..-+|..... ..| ..||+.|.....|.
T Consensus 35 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~ 113 (119)
T 2jp9_A 35 KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF-QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELV 113 (119)
T ss_dssp CCEECCSTTCCCEESSHHHHHHHHHHHHCCCCE-ECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHH
T ss_pred CCccCCCCCCcCccCCHHHHHHHHHHcCCCCCc-cCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHH
Confidence 4688884 999999999999999876542110 0011122333333344455544433 348 78999999999999
Q ss_pred HHHH
Q 006731 119 NHLH 122 (633)
Q Consensus 119 ~Hm~ 122 (633)
.||+
T Consensus 114 ~H~~ 117 (119)
T 2jp9_A 114 RHHN 117 (119)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9985
No 464
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=84.98 E-value=3.9 Score=41.29 Aligned_cols=108 Identities=18% Similarity=0.167 Sum_probs=60.4
Q ss_pred CEEEEECCCc-c-hHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHH-------hCCCCCCCCC-CCCCCCCCCcEEEEEcc
Q 006731 299 AVVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAVATQIAK-------DNDFWWDRPQ-SEGNINNAGKMEVVQGM 368 (633)
Q Consensus 299 ~~VLDVGcGt-G-~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~-------~ngl~~~~~~-~~~~~~~~~~I~vi~gd 368 (633)
++|.-||+|. | .++..++++|. +|+.+|.++..++.+++.+. ..|.-....+ .........++++. .+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~-~~ 93 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS-TD 93 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE-SC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe-cC
Confidence 5799999998 5 47778888887 89999999988776654332 1221000000 00000000124332 23
Q ss_pred ccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 369 ~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
..+. -...|+||.-.. ........++..+...++|+.+++
T Consensus 94 ~~~~-------~~~aD~Vi~avp----~~~~~~~~v~~~l~~~~~~~~iv~ 133 (302)
T 1f0y_A 94 AASV-------VHSTDLVVEAIV----ENLKVKNELFKRLDKFAAEHTIFA 133 (302)
T ss_dssp HHHH-------TTSCSEEEECCC----SCHHHHHHHHHHHTTTSCTTCEEE
T ss_pred HHHh-------hcCCCEEEEcCc----CcHHHHHHHHHHHHhhCCCCeEEE
Confidence 3211 146899985321 111224567778888888887665
No 465
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.91 E-value=2.7 Score=41.25 Aligned_cols=79 Identities=28% Similarity=0.344 Sum_probs=56.7
Q ss_pred CCCCEEEEECC-Ccch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 296 MKGAVVMDIGC-GTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 296 ~~~~~VLDVGc-GtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
.++++||-.|+ |.|+ ++..+++.|+ +|+.++.+...++.+.+.++..+- .++.++.+|+.+
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~Dl~~ 84 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGL--------------GRVEAVVCDVTS 84 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCS--------------SCEEEEECCTTC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCC--------------CceEEEEeCCCC
Confidence 57899999998 6764 6777788898 899999998877666666654432 679999999987
Q ss_pred ccccccc------CCCcccEEEEe
Q 006731 372 LGESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 372 l~~~~~l------~~~~~DvIvse 389 (633)
...-..+ ..+++|++|..
T Consensus 85 ~~~v~~~~~~~~~~~g~id~li~~ 108 (266)
T 3o38_A 85 TEAVDALITQTVEKAGRLDVLVNN 108 (266)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEC
Confidence 5411000 01478999976
No 466
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=84.61 E-value=3.2 Score=40.33 Aligned_cols=79 Identities=20% Similarity=0.246 Sum_probs=56.3
Q ss_pred CCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.++++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~ 70 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADG---------------GTAISVAVDVSDP 70 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CEEEEEECCTTSH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC---------------CcEEEEEccCCCH
Confidence 568999999998764 5666777798 89999999887766666555443 6789999999875
Q ss_pred cccccc------CCCcccEEEEec
Q 006731 373 GESMQI------QPHSVDVLVSEW 390 (633)
Q Consensus 373 ~~~~~l------~~~~~DvIvse~ 390 (633)
..-..+ ..+++|++|...
T Consensus 71 ~~~~~~~~~~~~~~g~id~li~~A 94 (253)
T 3qiv_A 71 ESAKAMADRTLAEFGGIDYLVNNA 94 (253)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 411000 013799999763
No 467
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=84.56 E-value=2 Score=42.66 Aligned_cols=79 Identities=16% Similarity=0.269 Sum_probs=54.2
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeC-------------CHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEA-------------SEKMAAVATQIAKDNDFWWDRPQSEGNINN 358 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~-------------S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~ 358 (633)
...+++||-.|++.|+ ++..+++.|+ +|++++. +...++.+.+.+...+
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 72 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN-------------- 72 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--------------
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--------------
Confidence 3578999999999874 5667777898 8999987 5555545444444433
Q ss_pred CCcEEEEEcccccccccccc------CCCcccEEEEe
Q 006731 359 AGKMEVVQGMVEELGESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 359 ~~~I~vi~gd~e~l~~~~~l------~~~~~DvIvse 389 (633)
.++.++.+|+.+...-..+ ..+++|++|.+
T Consensus 73 -~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnn 108 (277)
T 3tsc_A 73 -RRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVAN 108 (277)
T ss_dssp -CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred -CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5688999998875411000 01479999976
No 468
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=84.23 E-value=1.3 Score=39.48 Aligned_cols=77 Identities=19% Similarity=0.281 Sum_probs=38.6
Q ss_pred CCceeec--CCCCCCCHHHHHHHhhhhcCcchhhhhcc--ccccccCceeeehhh-Hhhccc--ccccc--cCCccCCHH
Q 006731 45 SGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVKTE--LRLDFYGSFKLINYI-RSQVAE--NRCWI--CGLTCQSNQ 115 (633)
Q Consensus 45 ~~~~CLF--C~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~--~~ld~Y~~IKlINyi-R~~~~~--~~C~~--C~~~~~~~~ 115 (633)
.+..|-+ |+..|.+...+..||+..++--.... .. =+.-|...-.|..-+ +..... ..|.. ||+.|....
T Consensus 66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C-~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~ 144 (155)
T 2gli_A 66 KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMC-EHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS 144 (155)
T ss_dssp CCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEEC-CSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHH
T ss_pred CCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeC-CCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHH
Confidence 4567776 77777777777777775443210000 00 111222222233333 222211 23766 777777767
Q ss_pred HHHHHHH
Q 006731 116 DLQNHLH 122 (633)
Q Consensus 116 ~~~~Hm~ 122 (633)
.|..||+
T Consensus 145 ~L~~H~~ 151 (155)
T 2gli_A 145 SLRKHVK 151 (155)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777765
No 469
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.16 E-value=2.2 Score=41.81 Aligned_cols=78 Identities=18% Similarity=0.124 Sum_probs=56.0
Q ss_pred CCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.++++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~Dv~~~ 68 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAG---------------GRIVARSLDARNE 68 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT---------------CEEEEEECCTTCH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CeEEEEECcCCCH
Confidence 468999999999874 5667777798 89999999876666666555543 6799999999875
Q ss_pred ccccccC-----CCcccEEEEe
Q 006731 373 GESMQIQ-----PHSVDVLVSE 389 (633)
Q Consensus 373 ~~~~~l~-----~~~~DvIvse 389 (633)
..-..+- .+++|++|.+
T Consensus 69 ~~v~~~~~~~~~~g~id~lv~n 90 (252)
T 3h7a_A 69 DEVTAFLNAADAHAPLEVTIFN 90 (252)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEC
T ss_pred HHHHHHHHHHHhhCCceEEEEC
Confidence 4110000 0478999976
No 470
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=84.05 E-value=1.5 Score=43.91 Aligned_cols=80 Identities=16% Similarity=0.192 Sum_probs=52.1
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
..++++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+- ..+.++.+|+.+
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~d 94 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTG--------------NIVRAVVCDVGD 94 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHS--------------SCEEEEECCTTC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC--------------CeEEEEEcCCCC
Confidence 3578999999998774 5666677798 899999998766555555443322 446889999887
Q ss_pred ccccccc------CCCcccEEEEe
Q 006731 372 LGESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 372 l~~~~~l------~~~~~DvIvse 389 (633)
...-..+ ..+++|++|.+
T Consensus 95 ~~~v~~~~~~~~~~~g~iD~lvnn 118 (281)
T 4dry_A 95 PDQVAALFAAVRAEFARLDLLVNN 118 (281)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5411000 01478999976
No 471
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=83.90 E-value=3 Score=42.97 Aligned_cols=114 Identities=12% Similarity=0.090 Sum_probs=69.9
Q ss_pred CCEEEEECCCc-c-hHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhC-------CCCCCCCCCCCCCCCCCcEEEEEcc
Q 006731 298 GAVVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAVATQIAKDN-------DFWWDRPQSEGNINNAGKMEVVQGM 368 (633)
Q Consensus 298 ~~~VLDVGcGt-G-~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~n-------gl~~~~~~~~~~~~~~~~I~vi~gd 368 (633)
..+|--||+|+ | .++..+|.+|. .|+..|.++..++.+.+.++.+ +.-. ........-.+|++. .+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~---~~~~~~~~l~~i~~~-~~ 80 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLK---GSLSAEEQLSLISSC-TN 80 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCC---SSSCHHHHHHTEEEE-CC
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCC---CccCHHHHHhhcccc-cc
Confidence 46899999998 4 47888888998 8999999999888777665431 1100 000000000123322 22
Q ss_pred ccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEeecceeEE
Q 006731 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTATMFV 427 (633)
Q Consensus 369 ~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip~~~t~~~ 427 (633)
+.+. -...|+|+ |.+ ......-..++..+.++++|+.++.-++-++.+
T Consensus 81 l~~a-------~~~ad~Vi-Eav---~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~i 128 (319)
T 3ado_A 81 LAEA-------VEGVVHIQ-ECV---PENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLP 128 (319)
T ss_dssp HHHH-------TTTEEEEE-ECC---CSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCH
T ss_pred hHhH-------hccCcEEe-ecc---ccHHHHHHHHHHHHHHHhhhcceeehhhhhccc
Confidence 2221 14688887 332 233345678999999999999888766655543
No 472
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=83.80 E-value=4.8 Score=43.17 Aligned_cols=38 Identities=29% Similarity=0.294 Sum_probs=29.7
Q ss_pred CCCCCEEEEECCCc-chHHHHHHHc-CCCeEEEEeCCHHHH
Q 006731 295 LMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMA 333 (633)
Q Consensus 295 ~~~~~~VLDVGcGt-G~lsl~~a~a-Ga~~V~aVD~S~~~~ 333 (633)
...|++|+-+|+|. |......+++ |+ +|+++|.++...
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra 256 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICA 256 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHH
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhh
Confidence 56899999999997 6655555554 88 899999998644
No 473
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=83.79 E-value=2.9 Score=42.65 Aligned_cols=80 Identities=15% Similarity=0.088 Sum_probs=56.9
Q ss_pred CCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
..+++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+.. .++.++.+|+.+.
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~-------------~~~~~~~~Dl~~~ 71 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSG-------------PEVMGVQLDVASR 71 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCG-------------GGEEEEECCTTCH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCC-------------CeEEEEECCCCCH
Confidence 568999999999874 5666677798 8999999988776666666544432 4799999999875
Q ss_pred cccccc------CCCcccEEEEe
Q 006731 373 GESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 373 ~~~~~l------~~~~~DvIvse 389 (633)
..-..+ ..+++|++|.+
T Consensus 72 ~~v~~~~~~~~~~~g~id~lv~n 94 (319)
T 3ioy_A 72 EGFKMAADEVEARFGPVSILCNN 94 (319)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEC
Confidence 311000 01478999976
No 474
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=83.78 E-value=3.1 Score=41.59 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=54.4
Q ss_pred CCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.++++||-.|++.|+ ++..+++.|+ +|+.++.+...++.+.+.+...+ .++.++.+|+.+.
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~Dv~d~ 89 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAG---------------GQAIALEADVSDE 89 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTT---------------CCEEEEECCTTCH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CcEEEEEccCCCH
Confidence 568999999998874 5666777798 89999999877655555554332 5788999999875
Q ss_pred cccccc------CCCcccEEEEe
Q 006731 373 GESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 373 ~~~~~l------~~~~~DvIvse 389 (633)
..-..+ ..+++|++|.+
T Consensus 90 ~~v~~~~~~~~~~~g~iD~lVnn 112 (283)
T 3v8b_A 90 LQMRNAVRDLVLKFGHLDIVVAN 112 (283)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEC
Confidence 311000 01479999976
No 475
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=83.49 E-value=1.1 Score=46.14 Aligned_cols=63 Identities=22% Similarity=0.249 Sum_probs=45.7
Q ss_pred CCcEEEEEccccccccccccCCCcccEEEEeccccccc------------ChhhHHHHHHHHhhcccCCcEEEeecce
Q 006731 359 AGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLL------------YESMLSSVLFARDQWLKPGGAILPDTAT 424 (633)
Q Consensus 359 ~~~I~vi~gd~e~l~~~~~l~~~~~DvIvse~mg~~L~------------~e~~l~~vl~a~~r~LkpgG~lip~~~t 424 (633)
.....+++||..+.... ++.++||+|++.+. |... +..++..++.++.++|+|||.++.....
T Consensus 12 ~~~~~ii~gD~~~~l~~--l~~~svDlI~tDPP-Y~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 12 TSNGSMYIGDSLELLES--FPEESISLVMTSPP-FALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp CSSEEEEESCHHHHGGG--SCSSCEEEEEECCC-CSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCceEEeCcHHHHHhh--CCCCCeeEEEECCC-CCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 46789999999874321 56789999999863 3222 1235677888899999999999876543
No 476
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=83.48 E-value=1.4 Score=52.21 Aligned_cols=42 Identities=26% Similarity=0.142 Sum_probs=35.7
Q ss_pred CCEEEEECCCcchHHHHHHHcCC-CeEEEEeCCHHHHHHHHHH
Q 006731 298 GAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQI 339 (633)
Q Consensus 298 ~~~VLDVGcGtG~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~ 339 (633)
..+|+|+-||.|.+++-+.++|. ..|.|+|+++.+++.-+.+
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N 582 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLN 582 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHH
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHh
Confidence 45899999999999999999997 6788999999887555443
No 477
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=83.48 E-value=6.1 Score=38.87 Aligned_cols=97 Identities=13% Similarity=0.046 Sum_probs=59.1
Q ss_pred CEEEEECCCcchHHHHHHHc----CCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccc
Q 006731 299 AVVMDIGCGTGILSLFAAQA----GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (633)
Q Consensus 299 ~~VLDVGcGtG~lsl~~a~a----Ga~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~ 374 (633)
++||-.|+ |.++..+++. |. +|++++.++....... . .+++++.+|+.++.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~----~-----------------~~~~~~~~D~~d~~- 60 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIR----A-----------------SGAEPLLWPGEEPS- 60 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHH----H-----------------TTEEEEESSSSCCC-
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHh----h-----------------CCCeEEEecccccc-
Confidence 68999995 7666655553 66 8999999875442221 1 45899999998854
Q ss_pred ccccCCCcccEEEEecccccccChhhHHHHHHHHhhcc-cCCcEEEeecceeE
Q 006731 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWL-KPGGAILPDTATMF 426 (633)
Q Consensus 375 ~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~L-kpgG~lip~~~t~~ 426 (633)
+ ..+|+||... +...........++.++.+.- +..-.++.++..+|
T Consensus 61 ---~--~~~d~vi~~a-~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vy 107 (286)
T 3ius_A 61 ---L--DGVTHLLIST-APDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVY 107 (286)
T ss_dssp ---C--TTCCEEEECC-CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGG
T ss_pred ---c--CCCCEEEECC-CccccccHHHHHHHHHHHhhcCCceEEEEeecceec
Confidence 3 5799999742 222222333455666665532 22334555554443
No 478
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=83.41 E-value=2.9 Score=41.76 Aligned_cols=80 Identities=16% Similarity=0.134 Sum_probs=54.9
Q ss_pred CCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.++++||-.|++.|+ ++..+++.|+ +|++++.+....+.+.+.+...+- .++.++.+|+.+.
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~Dl~~~ 74 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNH--------------ENVVFHQLDVTDP 74 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTC--------------CSEEEEECCTTSC
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC--------------CceEEEEccCCCc
Confidence 467899999998774 5666677788 899999998776666555554432 5799999999875
Q ss_pred -cccccc------CCCcccEEEEec
Q 006731 373 -GESMQI------QPHSVDVLVSEW 390 (633)
Q Consensus 373 -~~~~~l------~~~~~DvIvse~ 390 (633)
.....+ ..+++|++|.+.
T Consensus 75 ~~~v~~~~~~~~~~~g~iD~lv~nA 99 (311)
T 3o26_A 75 IATMSSLADFIKTHFGKLDILVNNA 99 (311)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECC
Confidence 210000 014799999863
No 479
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=83.21 E-value=3.3 Score=40.65 Aligned_cols=79 Identities=19% Similarity=0.212 Sum_probs=55.9
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
..++++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+ .++.++.+|+.+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~D~~~ 89 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAG---------------GEAESHACDLSH 89 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CEEEEEECCTTC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhC---------------CceeEEEecCCC
Confidence 4678999999988763 4556667788 89999999887766666665543 578999999887
Q ss_pred ccccccc------CCCcccEEEEe
Q 006731 372 LGESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 372 l~~~~~l------~~~~~DvIvse 389 (633)
...-..+ ..+++|+||..
T Consensus 90 ~~~v~~~~~~~~~~~g~id~lv~~ 113 (262)
T 3rkr_A 90 SDAIAAFATGVLAAHGRCDVLVNN 113 (262)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 5411000 01469999975
No 480
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=83.03 E-value=4.2 Score=38.75 Aligned_cols=93 Identities=12% Similarity=-0.015 Sum_probs=54.5
Q ss_pred EEEEECCCc-c-hHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccccc
Q 006731 300 VVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQ 377 (633)
Q Consensus 300 ~VLDVGcGt-G-~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~~ 377 (633)
+|+-+|+|. | .++..+.+.|. .|+++|.++..++...+ . ..+.++.+|..+...-..
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~---~-----------------~~~~~i~gd~~~~~~l~~ 60 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAK---K-----------------LKATIIHGDGSHKEILRD 60 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH---H-----------------SSSEEEESCTTSHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHH---H-----------------cCCeEEEcCCCCHHHHHh
Confidence 578889865 3 34555555677 89999999987644332 1 235678898876431111
Q ss_pred cCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 378 IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 378 l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
..-..+|+||+-. .......++....+.+.|...++
T Consensus 61 a~i~~ad~vi~~~------~~d~~n~~~~~~a~~~~~~~~ii 96 (218)
T 3l4b_C 61 AEVSKNDVVVILT------PRDEVNLFIAQLVMKDFGVKRVV 96 (218)
T ss_dssp HTCCTTCEEEECC------SCHHHHHHHHHHHHHTSCCCEEE
T ss_pred cCcccCCEEEEec------CCcHHHHHHHHHHHHHcCCCeEE
Confidence 1235799998632 22233344444455555665555
No 481
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=82.95 E-value=3.3 Score=40.63 Aligned_cols=79 Identities=23% Similarity=0.278 Sum_probs=56.5
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
..++++||-.|++.|+ ++..+++.|+ +|+.++.+....+.+.+.+...+ .++.++.+|+.+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~Dv~d 72 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAG---------------GKAIGLECNVTD 72 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTT---------------CCEEEEECCTTC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CcEEEEECCCCC
Confidence 3578999999999874 5666777798 89999999877666666555443 568999999987
Q ss_pred ccccccc------CCCcccEEEEe
Q 006731 372 LGESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 372 l~~~~~l------~~~~~DvIvse 389 (633)
...-..+ ..+++|++|.+
T Consensus 73 ~~~v~~~~~~~~~~~g~id~lv~n 96 (256)
T 3gaf_A 73 EQHREAVIKAALDQFGKITVLVNN 96 (256)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5411000 01479999976
No 482
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=82.95 E-value=2.3 Score=42.33 Aligned_cols=78 Identities=31% Similarity=0.459 Sum_probs=53.3
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
..++++||-.|++.|+ ++..+++.|+ +|++++.++...+.+.+. ...+ .++.++.+|+.+
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~-~~~~---------------~~~~~~~~Dv~d 90 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEI-ADGG---------------GSAEAVVADLAD 90 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHH-HTTT---------------CEEEEEECCTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHH-HhcC---------------CcEEEEEecCCC
Confidence 4678999999998874 6667777798 899999776555444433 3322 678999999987
Q ss_pred ccccccc-----CCCcccEEEEe
Q 006731 372 LGESMQI-----QPHSVDVLVSE 389 (633)
Q Consensus 372 l~~~~~l-----~~~~~DvIvse 389 (633)
......+ ..+++|++|.+
T Consensus 91 ~~~v~~~~~~~~~~g~iD~lv~n 113 (273)
T 3uf0_A 91 LEGAANVAEELAATRRVDVLVNN 113 (273)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEC
Confidence 5421111 01479999976
No 483
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=82.78 E-value=0.71 Score=48.86 Aligned_cols=42 Identities=24% Similarity=0.405 Sum_probs=31.6
Q ss_pred CCCCEEEEECCCc-chHHHHHHH-cCCCeEEEEeCCHHHHHHHHH
Q 006731 296 MKGAVVMDIGCGT-GILSLFAAQ-AGASRVIAVEASEKMAAVATQ 338 (633)
Q Consensus 296 ~~~~~VLDVGcGt-G~lsl~~a~-aGa~~V~aVD~S~~~~~~A~~ 338 (633)
.++.+|+-+|+|. |..+...++ .|+ +|+++|.++..++.+++
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 3678999999997 665554444 488 89999999976655554
No 484
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=82.63 E-value=4 Score=41.15 Aligned_cols=79 Identities=22% Similarity=0.212 Sum_probs=57.2
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
...+++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+ .++.++.+|+.+
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~Dv~d 91 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQG---------------FDAHGVVCDVRH 91 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CCEEEEECCTTC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC---------------CceEEEEccCCC
Confidence 3678999999999774 5666777798 89999999887766666665544 568999999987
Q ss_pred ccccccc------CCCcccEEEEe
Q 006731 372 LGESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 372 l~~~~~l------~~~~~DvIvse 389 (633)
...-..+ ..+++|++|.+
T Consensus 92 ~~~v~~~~~~~~~~~g~id~lvnn 115 (301)
T 3tjr_A 92 LDEMVRLADEAFRLLGGVDVVFSN 115 (301)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEC
Confidence 5421000 01479999976
No 485
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=82.52 E-value=2.6 Score=42.34 Aligned_cols=82 Identities=16% Similarity=0.140 Sum_probs=55.2
Q ss_pred CCCCEEEEECCCcch---HHHHHHHcCC--CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccc
Q 006731 296 MKGAVVMDIGCGTGI---LSLFAAQAGA--SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~---lsl~~a~aGa--~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e 370 (633)
..+++||-.|++.|+ ++..+++.|+ .+|+.++.+...++.+.+.+...... .++.++.+|+.
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~-------------~~~~~~~~Dv~ 97 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN-------------AKVHVAQLDIT 97 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTT-------------CEEEEEECCTT
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCC-------------CeEEEEECCCC
Confidence 367999999998774 4555566666 38999999987776665555443222 67899999998
Q ss_pred ccccccc----c--CCCcccEEEEec
Q 006731 371 ELGESMQ----I--QPHSVDVLVSEW 390 (633)
Q Consensus 371 ~l~~~~~----l--~~~~~DvIvse~ 390 (633)
+...-.. . ..+++|++|.+.
T Consensus 98 d~~~v~~~~~~~~~~~g~iD~lVnnA 123 (287)
T 3rku_A 98 QAEKIKPFIENLPQEFKDIDILVNNA 123 (287)
T ss_dssp CGGGHHHHHHTSCGGGCSCCEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 7542100 0 124799999763
No 486
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=82.34 E-value=4.3 Score=41.72 Aligned_cols=45 Identities=22% Similarity=0.322 Sum_probs=32.8
Q ss_pred HHHHHHHhCCCCCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCC
Q 006731 284 SYRQAILENPSLMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEAS 329 (633)
Q Consensus 284 ~y~~aI~~~~~~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S 329 (633)
.+..++.......++++||-+|+| |. .+..+++.|+++|+.+..+
T Consensus 140 Gf~~~L~~~~~~l~gk~~lVlGaG-G~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 140 GYMRALKEAGHDIIGKKMTICGAG-GAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp HHHHHHHHTTCCCTTSEEEEECCS-HHHHHHHHHHHHTTCSEEEEEECS
T ss_pred HHHHHHHHcCCCccCCEEEEECCC-hHHHHHHHHHHHCCCCEEEEEECC
Confidence 355566554344678999999998 42 4555666799899999988
No 487
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=82.32 E-value=4.2 Score=40.88 Aligned_cols=79 Identities=18% Similarity=0.243 Sum_probs=54.2
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCC------------HHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEAS------------EKMAAVATQIAKDNDFWWDRPQSEGNINNA 359 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S------------~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~ 359 (633)
..++++||-.|++.|+ ++..+++.|+ +|++++.+ +..++.+.+.+...+
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 88 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--------------- 88 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT---------------
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcC---------------
Confidence 4678999999999874 5667777898 89999986 544444444444433
Q ss_pred CcEEEEEcccccccccccc------CCCcccEEEEe
Q 006731 360 GKMEVVQGMVEELGESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 360 ~~I~vi~gd~e~l~~~~~l------~~~~~DvIvse 389 (633)
.++.++.+|+.+...-..+ ..+++|++|.+
T Consensus 89 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~n 124 (299)
T 3t7c_A 89 RRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLAN 124 (299)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 5689999999875411000 01479999976
No 488
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=82.07 E-value=4.5 Score=40.10 Aligned_cols=79 Identities=22% Similarity=0.232 Sum_probs=55.0
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeC-------------CHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEA-------------SEKMAAVATQIAKDNDFWWDRPQSEGNINN 358 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~-------------S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~ 358 (633)
..++++||-.|++.|+ ++..+++.|+ +|++++. ++..++.+.+.+...+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 76 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-------------- 76 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--------------
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--------------
Confidence 4678999999999874 5667777898 8999997 5665555555555443
Q ss_pred CCcEEEEEcccccccccccc------CCCcccEEEEe
Q 006731 359 AGKMEVVQGMVEELGESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 359 ~~~I~vi~gd~e~l~~~~~l------~~~~~DvIvse 389 (633)
.++.++.+|+.+...-..+ ..+++|++|.+
T Consensus 77 -~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnn 112 (280)
T 3pgx_A 77 -RKALTRVLDVRDDAALRELVADGMEQFGRLDVVVAN 112 (280)
T ss_dssp -CCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEEC
T ss_pred -CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5688999998765311000 01479999976
No 489
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=82.01 E-value=3.3 Score=41.52 Aligned_cols=103 Identities=11% Similarity=0.055 Sum_probs=61.7
Q ss_pred CEEEEECCCc-c-hHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhC---------CCCCCCCCCCCCCCCCCcEEEEEc
Q 006731 299 AVVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAVATQIAKDN---------DFWWDRPQSEGNINNAGKMEVVQG 367 (633)
Q Consensus 299 ~~VLDVGcGt-G-~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~n---------gl~~~~~~~~~~~~~~~~I~vi~g 367 (633)
++|.-||+|+ | .++..++++|. +|+.+|.++..++.+++.+..+ ++.. .. ......++++ ..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~----~~-~~~~~~~i~~-~~ 77 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAAD----GA-AQKALGGIRY-SD 77 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTT----TH-HHHHHHHCEE-ES
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCH----HH-HHHHHcCeEE-eC
Confidence 5789999997 4 46777788898 8999999998887776653211 1110 00 0000012332 22
Q ss_pred cccccccccccCCCcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 368 d~e~l~~~~~l~~~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
+..+. -...|+||... .........++..+...++|+.+++
T Consensus 78 ~~~~~-------~~~aDlVi~av----~~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 78 DLAQA-------VKDADLVIEAV----PESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp CHHHH-------TTTCSEEEECC----CSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred CHHHH-------hccCCEEEEec----cCcHHHHHHHHHHHHhhCCCCcEEE
Confidence 33222 14689998532 1222355677888888899988776
No 490
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=82.01 E-value=3.1 Score=40.77 Aligned_cols=79 Identities=23% Similarity=0.299 Sum_probs=55.6
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
..++++||-.|++.|+ ++..+++.|+ +|+.++.++..++.+.+.+...+ .++.++.+|+.+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~Dv~~ 66 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFP---------------GQILTVQMDVRN 66 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCST---------------TCEEEEECCTTC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CcEEEEEccCCC
Confidence 3578999999988774 5666777798 89999999887766665554332 578999999987
Q ss_pred ccccccc------CCCcccEEEEe
Q 006731 372 LGESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 372 l~~~~~l------~~~~~DvIvse 389 (633)
...-..+ ..+++|++|.+
T Consensus 67 ~~~v~~~~~~~~~~~g~id~lv~n 90 (257)
T 3imf_A 67 TDDIQKMIEQIDEKFGRIDILINN 90 (257)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5311000 01478999975
No 491
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=81.97 E-value=1.4 Score=40.84 Aligned_cols=50 Identities=18% Similarity=0.319 Sum_probs=0.0
Q ss_pred CCCCceeec--CCCCCCCHHHHHHHhhhhcCcchhhhhccccccccCceeeehhhHhhcccccccc---cCCccCCHHHH
Q 006731 43 LESGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWI---CGLTCQSNQDL 117 (633)
Q Consensus 43 ~~~~~~CLF--C~~~~~~~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~IKlINyiR~~~~~~~C~~---C~~~~~~~~~~ 117 (633)
...+..|-+ |+..|.+...+..||+..++ ..|.. |+..|.....|
T Consensus 131 ~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~------------------------------~~C~~~~~C~~~f~~~~~l 180 (190)
T 1tf6_A 131 QQLPYECPHEGCDKRFSLPSRLKRHEKVHAG------------------------------YPCKKDDSCSFVGKTWTLY 180 (190)
T ss_dssp SSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS------------------------------CCCCSTTTCCCCCSCHHHH
T ss_pred CCCCccCCCCCCCchhcCHHHHHHHHHHhCC------------------------------CcCCCCCcCCCccccHHHH
Q ss_pred HHHHH
Q 006731 118 QNHLH 122 (633)
Q Consensus 118 ~~Hm~ 122 (633)
..||+
T Consensus 181 ~~H~~ 185 (190)
T 1tf6_A 181 LKHVA 185 (190)
T ss_dssp HHHHT
T ss_pred HHHHH
No 492
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=81.95 E-value=4.5 Score=40.00 Aligned_cols=80 Identities=14% Similarity=0.212 Sum_probs=54.5
Q ss_pred CCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.++++||-.|++.|+ ++..+++.|+ +|++++.++..++...+.+...+.. .++.++.+|+.+.
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~ 95 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYP-------------GTLIPYRCDLSNE 95 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCS-------------SEEEEEECCTTCH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCC-------------ceEEEEEecCCCH
Confidence 467899999987653 4555666787 8999999987665555555555543 6788999998765
Q ss_pred cccccc------CCCcccEEEEe
Q 006731 373 GESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 373 ~~~~~l------~~~~~DvIvse 389 (633)
..-..+ ..+++|+||..
T Consensus 96 ~~v~~~~~~~~~~~g~iD~vi~~ 118 (279)
T 1xg5_A 96 EDILSMFSAIRSQHSGVDICINN 118 (279)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEC
Confidence 411000 01369999975
No 493
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=81.86 E-value=4.2 Score=40.48 Aligned_cols=78 Identities=15% Similarity=0.150 Sum_probs=53.8
Q ss_pred CCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccc
Q 006731 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (633)
Q Consensus 296 ~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l 372 (633)
.++++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~Dv~d~ 85 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAG---------------HDVDGSSCDVTST 85 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT---------------CCEEEEECCTTCH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CcEEEEECCCCCH
Confidence 467899999998774 5666777798 89999999887766666555443 5689999998875
Q ss_pred cccccc------CCCcccEEEEe
Q 006731 373 GESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 373 ~~~~~l------~~~~~DvIvse 389 (633)
..-..+ ..+++|++|.+
T Consensus 86 ~~v~~~~~~~~~~~g~id~lv~n 108 (279)
T 3sju_A 86 DEVHAAVAAAVERFGPIGILVNS 108 (279)
T ss_dssp HHHHHHHHHHHHHHCSCCEEEEC
T ss_pred HHHHHHHHHHHHHcCCCcEEEEC
Confidence 411000 01478999976
No 494
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=81.83 E-value=7.3 Score=38.57 Aligned_cols=88 Identities=11% Similarity=0.122 Sum_probs=54.4
Q ss_pred CEEEEECCCc-c-hHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccccccc
Q 006731 299 AVVMDIGCGT-G-ILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (633)
Q Consensus 299 ~~VLDVGcGt-G-~lsl~~a~aGa-~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~ 375 (633)
++|.-||+|. | .++..+++.|. .+|+++|.++..++.++ ..|.. .. ...+..+..
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~g~~-------------~~---~~~~~~~~~-- 59 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGII-------------DE---GTTSIAKVE-- 59 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSC-------------SE---EESCGGGGG--
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH----HCCCc-------------cc---ccCCHHHHh--
Confidence 3688999997 4 45666667674 37999999987665443 23431 11 112332221
Q ss_pred cccCCC-cccEEEEecccccccChhhHHHHHHHHhhcccCCcEEE
Q 006731 376 MQIQPH-SVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (633)
Q Consensus 376 ~~l~~~-~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~li 419 (633)
. ..|+|+.-. .......++..+...++++.+++
T Consensus 60 -----~~~aDvVilav------p~~~~~~v~~~l~~~l~~~~iv~ 93 (281)
T 2g5c_A 60 -----DFSPDFVMLSS------PVRTFREIAKKLSYILSEDATVT 93 (281)
T ss_dssp -----GTCCSEEEECS------CHHHHHHHHHHHHHHSCTTCEEE
T ss_pred -----cCCCCEEEEcC------CHHHHHHHHHHHHhhCCCCcEEE
Confidence 4 689998532 22345567777777888887665
No 495
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=81.82 E-value=5.7 Score=39.16 Aligned_cols=94 Identities=16% Similarity=0.184 Sum_probs=54.5
Q ss_pred hhhHHHHHHHHh-CCCCCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 006731 280 VRTDSYRQAILE-NPSLMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGN 355 (633)
Q Consensus 280 ~R~~~y~~aI~~-~~~~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~ 355 (633)
.|-..+...+.. ......+++||-.|++.|+ ++..+++.|+ +|++++.++...+...+.++..+
T Consensus 12 ~~~~~~~~~~~~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~----------- 79 (272)
T 1yb1_A 12 GRENLYFQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLG----------- 79 (272)
T ss_dssp -------------CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-----------
T ss_pred cchhheeccccCCcccccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcC-----------
Confidence 344445555433 2334678999999988653 4555666687 89999999876655554444433
Q ss_pred CCCCCcEEEEEcccccccccccc------CCCcccEEEEe
Q 006731 356 INNAGKMEVVQGMVEELGESMQI------QPHSVDVLVSE 389 (633)
Q Consensus 356 ~~~~~~I~vi~gd~e~l~~~~~l------~~~~~DvIvse 389 (633)
.++.++.+|+.+...-..+ ..+++|+||..
T Consensus 80 ----~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~ 115 (272)
T 1yb1_A 80 ----AKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNN 115 (272)
T ss_dssp ----CCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEEC
T ss_pred ----CeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEEC
Confidence 5689999998764311000 01478999975
No 496
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=81.50 E-value=3.4 Score=40.68 Aligned_cols=79 Identities=13% Similarity=0.136 Sum_probs=55.8
Q ss_pred CCCCEEEEECCCc--ch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccc
Q 006731 296 MKGAVVMDIGCGT--GI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (633)
Q Consensus 296 ~~~~~VLDVGcGt--G~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e 370 (633)
++||++|--|++. |+ ++..+++.|+ +|+.++.++...+.+.+.+...+- .++.++++|+.
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~ 68 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQ--------------PEAHLYQIDVQ 68 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTC--------------SSCEEEECCTT
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC--------------CcEEEEEccCC
Confidence 6899999999743 53 5777888899 899999998777666666655432 46788999987
Q ss_pred ccccccc------cCCCcccEEEEe
Q 006731 371 ELGESMQ------IQPHSVDVLVSE 389 (633)
Q Consensus 371 ~l~~~~~------l~~~~~DvIvse 389 (633)
+...-.. -.-+++|++|.+
T Consensus 69 ~~~~v~~~~~~~~~~~G~iD~lvnn 93 (256)
T 4fs3_A 69 SDEEVINGFEQIGKDVGNIDGVYHS 93 (256)
T ss_dssp CHHHHHHHHHHHHHHHCCCSEEEEC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEec
Confidence 6431100 012579999976
No 497
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=81.47 E-value=9.3 Score=38.43 Aligned_cols=51 Identities=20% Similarity=0.212 Sum_probs=34.0
Q ss_pred HHHHHHhCCCCCCCCEEEEECCCc-c-hHHHHHHHcCCCeEEEEeCCHHHHHH
Q 006731 285 YRQAILENPSLMKGAVVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAV 335 (633)
Q Consensus 285 y~~aI~~~~~~~~~~~VLDVGcGt-G-~lsl~~a~aGa~~V~aVD~S~~~~~~ 335 (633)
|..++.......++++||-+|+|- | ..+..+++.|+++|+.++.++...+.
T Consensus 113 ~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~ 165 (281)
T 3o8q_A 113 LVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQ 165 (281)
T ss_dssp HHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHH
T ss_pred HHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHH
Confidence 455555443346789999999982 2 23444555688899999998765433
No 498
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=81.34 E-value=11 Score=37.41 Aligned_cols=99 Identities=16% Similarity=0.175 Sum_probs=56.2
Q ss_pred CEEEEECCCc-c-hHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEcccccccccc
Q 006731 299 AVVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (633)
Q Consensus 299 ~~VLDVGcGt-G-~lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~~~~ 376 (633)
.+|.-||+|. | .++..++++|. +|+.+|.++..++..++. ++.. .. . .........+....
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~----g~~~-------~~-~-~~~~~~~~~~~~~~--- 66 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKN----GLIA-------DF-N-GEEVVANLPIFSPE--- 66 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHH----CEEE-------EE-T-TEEEEECCCEECGG---
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhC----CEEE-------Ee-C-CCeeEecceeecch---
Confidence 4799999997 4 56677777787 899999998765444322 3210 00 0 00000000111110
Q ss_pred ccCC--CcccEEEEecccccccChhhHHHHHHHHhhcccCCcEEEe
Q 006731 377 QIQP--HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (633)
Q Consensus 377 ~l~~--~~~DvIvse~mg~~L~~e~~l~~vl~a~~r~LkpgG~lip 420 (633)
.... ..+|+|+.-. .......++..+...|+|+..++.
T Consensus 67 ~~~~~~~~~d~vi~~v------~~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 67 EIDHQNEQVDLIIALT------KAQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp GCCTTSCCCSEEEECS------CHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred hhcccCCCCCEEEEEe------ccccHHHHHHHHHHhcCCCCEEEE
Confidence 0111 2799998632 234567788888888988877663
No 499
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=81.26 E-value=3.6 Score=41.36 Aligned_cols=76 Identities=20% Similarity=0.222 Sum_probs=54.2
Q ss_pred CCCCCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcEEEEEccccc
Q 006731 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (633)
Q Consensus 295 ~~~~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~ 371 (633)
.++||++|--|++.|+ .+..+++.|+ +|+.++.+...++.+.+.+ + .++..+++|+.+
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~---g---------------~~~~~~~~Dv~~ 86 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI---G---------------GGAVGIQADSAN 86 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---C---------------TTCEEEECCTTC
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc---C---------------CCeEEEEecCCC
Confidence 3689999999999985 6777788899 8999999987765443332 2 456778899876
Q ss_pred cccccc------cCCCcccEEEEe
Q 006731 372 LGESMQ------IQPHSVDVLVSE 389 (633)
Q Consensus 372 l~~~~~------l~~~~~DvIvse 389 (633)
...-.. -.-++.|++|.+
T Consensus 87 ~~~v~~~~~~~~~~~G~iDiLVNN 110 (273)
T 4fgs_A 87 LAELDRLYEKVKAEAGRIDVLFVN 110 (273)
T ss_dssp HHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEC
Confidence 541100 012579999976
No 500
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=81.25 E-value=3.9 Score=39.24 Aligned_cols=76 Identities=16% Similarity=0.067 Sum_probs=51.6
Q ss_pred CCEEEEECCCcch---HHHHHHHcCCCeEEEEeCCHHHHHHHHHHHH-hCCCCCCCCCCCCCCCCCCcEEEEEccccccc
Q 006731 298 GAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAK-DNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (633)
Q Consensus 298 ~~~VLDVGcGtG~---lsl~~a~aGa~~V~aVD~S~~~~~~A~~~~~-~ngl~~~~~~~~~~~~~~~~I~vi~gd~e~l~ 373 (633)
+++||-.|++.|+ ++..+++.|+ +|+.++.+...++.+.+.+. ..+ .++.++.+|+.+..
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~~ 65 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQG---------------VEVFYHHLDVSKAE 65 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHC---------------CCEEEEECCTTCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcC---------------CeEEEEEeccCCHH
Confidence 6789999988764 5666667788 79999999876655444443 322 56899999998754
Q ss_pred cccccC------CCcccEEEEe
Q 006731 374 ESMQIQ------PHSVDVLVSE 389 (633)
Q Consensus 374 ~~~~l~------~~~~DvIvse 389 (633)
.-..+- .+++|++|.+
T Consensus 66 ~v~~~~~~~~~~~g~id~li~~ 87 (235)
T 3l77_A 66 SVEEFSKKVLERFGDVDVVVAN 87 (235)
T ss_dssp HHHHHCC-HHHHHSSCSEEEEC
T ss_pred HHHHHHHHHHHhcCCCCEEEEC
Confidence 211111 1379999976
Done!