BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006737
(633 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80792|RH33_ARATH Putative DEAD-box ATP-dependent RNA helicase 33 OS=Arabidopsis
thaliana GN=RH33 PE=3 SV=1
Length = 845
Score = 567 bits (1462), Expect = e-161, Method: Compositional matrix adjust.
Identities = 311/604 (51%), Positives = 407/604 (67%), Gaps = 73/604 (12%)
Query: 17 LWFNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQEKQLYQARVRSQIRT 76
LW NR+F+R MGGGPRTFPGGLNKWQWKRMHEKKA+EKE +LL+QEKQLY+AR+R++IR
Sbjct: 67 LW-NRIFSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYEARIRTEIRA 125
Query: 77 KLFDKADPDSET----NQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKS-EQRPRS 131
K++ D +T H PMSP EH+K LADRFMK GA+DLWN++DGPVK +Q RS
Sbjct: 126 KMWGHPDSGEKTAKLKQSHGPMSPKEHIKTLADRFMKAGADDLWNDNDGPVKKFDQGSRS 185
Query: 132 GAEANQRPRLAGAPIDLRGLISDKRNSVNNSGNLNSGSNVKTRNYSVLSESKFSDRSKSA 191
+++ + PID+R L+S +S+ L+S R +S +S K ++ S
Sbjct: 186 CSDS-----IDSTPIDVRRLVSATCDSMGKHRVLDSSR----RGFSSMSRFKRNESS--- 233
Query: 192 SLIFMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAK 251
C++G+ V D DT
Sbjct: 234 ---------CDEGDDV--------------------------------DAKKLDT---LS 249
Query: 252 PFARNLGNNREN-GDSKNMSEFMKKKCFVGKRRFKRNESSSSDDDSDIDSEDVDEKVEGW 310
PF+ +E S ++ ++ K G+R+F++N+SS+ +D D E + K+ GW
Sbjct: 250 PFSPKFSGTKEKVKSSTSVVGVIRNKGLFGRRKFRKNDSSTEEDS---DEEGNEGKMIGW 306
Query: 311 RDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKLNGNGEKKEKR 370
D++K GSSASLG +D+K+TKRV ++E + +R+++SK + N ++++
Sbjct: 307 MDLRKTGSSASLGNHDIKLTKRVNRNVTDEELYPPLDINRVREDLSKKQSVDNVMEEKQE 366
Query: 371 EEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
+ I S KRFDE ISPLT+KAL+A+G ++MTRVQ+ATLS CL+GKDA+VKAKTGTGKS
Sbjct: 367 PHDSIYSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKS 426
Query: 431 IAFLLPAIEAVLKATSSST-TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT 489
+AFLLPAIE VLKA +S V PI+VLILCPTRELASQIAAE ALLKNHDGIGV T
Sbjct: 427 MAFLLPAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQT 486
Query: 490 LVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDL 549
L+GGTRF++DQ+RLES+PCQIL+ATPGRLLDHIENKSGL+ RLM LK+ ++DEAD LLDL
Sbjct: 487 LIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDL 546
Query: 550 GFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKVS 603
GF++DVE I+DCLPR+RQSLLFSAT+PKE LVLKR+H+YIDT+GLG VET KV
Sbjct: 547 GFKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVK 606
Query: 604 KYNI 607
+ I
Sbjct: 607 QSCI 610
>sp|Q9C8S9|RH48_ARATH Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis
thaliana GN=RH48 PE=3 SV=1
Length = 798
Score = 567 bits (1461), Expect = e-160, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 415/620 (66%), Gaps = 70/620 (11%)
Query: 1 MSSSVLLQRSKPLTNILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLE 60
M S +L +RS +T LW NR+ +R MGGGPRTFPGGLNKWQWKRMHEKKA+EKE +LL+
Sbjct: 1 MYSLILRERSGSITGSLW-NRISSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLD 59
Query: 61 QEKQLYQARVRSQIRTKLFDKADPDSET----NQHKPMSPDEHVKALADRFMKEGAEDLW 116
QEKQLY+AR+R++IR K++ D +T H PMSP EH+K LADRFMK GAED W
Sbjct: 60 QEKQLYEARIRTEIRAKMWGNPDSGEKTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDFW 119
Query: 117 NEDDGPV-KSEQRPRSGAEANQRPRLAGAPIDLRGLISDKRNSVNNSGNLNSGSNVKTRN 175
NE+DGPV KS+Q RSG+++ + +PID+R L+S +S+ + S R
Sbjct: 120 NENDGPVKKSDQGSRSGSDSID--STSNSPIDVRRLVSATCDSMGKNRVFGSSR----RG 173
Query: 176 YSVLSESKFSDRSKSASLIFMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDG 235
+S +S K ++ S C++G+ DF
Sbjct: 174 FSSMSRFKRNESS------------CDEGD---------DF------------------- 193
Query: 236 SSTRDKAGFDTGNKAKPFARNLGNNREN-GDSKNMSEFMKKKCFVGKRRFKRNESSSSDD 294
D DT PF+ +E S+++ ++ K G+R+F++N+SS+
Sbjct: 194 ----DAKKLDT---LSPFSPKFAGTKEKVKSSRSVVGVIRNKGLFGRRKFRKNDSSTE-- 244
Query: 295 DSDIDSEDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKE 354
D D E + K+ GW D++K GSSASLG +D+K+TKRV ++E + +R++
Sbjct: 245 -EDSDEEGDEGKMIGWMDMRKTGSSASLGNHDIKLTKRVNRNVTDEELYPPLDINTVRED 303
Query: 355 ISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACL 414
+SK K N ++++ + I S KRFDE ISPLT+KAL+A+G ++MTRVQ+ATLS CL
Sbjct: 304 LSKRKSVDNVMEEKQEPHDSIYSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECL 363
Query: 415 EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST-TQLVPPIYVLILCPTRELASQIAA 473
+GKDA+VKAKTGTGKS+AFLLPAIE VLKA +S V PI+ LILCPTRELASQIAA
Sbjct: 364 DGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAA 423
Query: 474 EAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533
E ALLK HDGIGV TL+GGTRFK+DQ+RLES+PCQIL+ATPGRLLDHIENKSGL+ RLM
Sbjct: 424 EGKALLKFHDGIGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLM 483
Query: 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTY 587
LK+ ++DEAD LLDLGFR+DVE I+DCLPR+RQSLLFSAT+PKE LVLKR+H+Y
Sbjct: 484 ALKLFIVDEADLLLDLGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSY 543
Query: 588 IDTVGLGSVETPVKVSKYNI 607
IDT+GLG VET KV + I
Sbjct: 544 IDTIGLGCVETHDKVRQSCI 563
>sp|Q6K7R9|RH48_ORYSJ DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa subsp.
japonica GN=Os02g0826100 PE=2 SV=1
Length = 811
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 289/605 (47%), Positives = 365/605 (60%), Gaps = 59/605 (9%)
Query: 27 MGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQEKQLYQARVRSQIRTKLFDKADPDS 86
MGGGPRTFPGGL+KWQ KRMHEK A+ KE+ LL EKQLY AR+RS+IR A
Sbjct: 1 MGGGPRTFPGGLSKWQHKRMHEKLARHKERGLLRHEKQLYLARLRSEIRASRLPAAGASP 60
Query: 87 ETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQRPRS-------GAEANQRP 139
+ P S H++ALADRF+ GAEDLWNEDDGP+ RPR G R
Sbjct: 61 PDDGDGPTSSRAHIRALADRFLLPGAEDLWNEDDGPIHRADRPRPPRRIVSVGGNGGDRR 120
Query: 140 RLAGAPIDL-RGLISDKRNSVNNSGNLNSGSNVKTRNYSVLSESKFSDRSKSASLIF--- 195
+L +L RG + + N + + + + S + R+K AS F
Sbjct: 121 KLDSTKQELPRGGKEPRLAAFNPRRDFQTAAPWWWQWSSSSA---IPSRTKEASFCFFGP 177
Query: 196 ------MPNLECND---GETVIPSRNVMDFVRRAYFSGTDKRNFCRNDGSSTRDKAGFDT 246
MP + + G +++P + R S + + +G A
Sbjct: 178 KRSYSVMPLFQAHQESSGTSMVP------LIARGLASA--RIAPSQLNGERFYSFAAGRF 229
Query: 247 GNKAKPFARNLGNNRENGDSKNMSEFMKKKCFVGKRRFKRNESSSSDDDSDIDSEDVDEK 306
G K +P + + + + K+M RF R +SS+++S D +
Sbjct: 230 GRKLRPDSSDEDDEDISTAKKDM-------------RFARF-GASSEEESGYD------E 269
Query: 307 VEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEH-DFEEQVELIRKEISKNKLNGNGE 365
+E ++K SSA+L DMK +R LKS E+E+ D +R+EI ++ G
Sbjct: 270 LEARSAIRKKWSSAALRNCDMKKERRA-LKSYEEENNDLAGSFRELREEIKNREVLGAER 328
Query: 366 KKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKT 425
++ + E + + KRF+ECGISPLT+KALT AGY+Q T VQE L CLEGKD +VKAKT
Sbjct: 329 RRYESRGESLFTNKRFEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKT 388
Query: 426 GTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI 485
GTGKS AFLLPAIE+VL A S T V PI+ LILCPTRELA Q+ AEA LLK H GI
Sbjct: 389 GTGKSAAFLLPAIESVLNAMKSHTNHRVSPIFSLILCPTRELAIQLTAEANVLLKYHQGI 448
Query: 486 GVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADH 545
GV +L+GGTRFK+DQRRLESDPCQILVATPGRLLDHIENKS SVRLMGLK+LVLDEADH
Sbjct: 449 GVQSLIGGTRFKLDQRRLESDPCQILVATPGRLLDHIENKSSFSVRLMGLKLLVLDEADH 508
Query: 546 LLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETP 599
LLDLGFR D+E IVD LPR+RQ+LLFSAT+PKE LVLKR+H ++DTVGLG+VETP
Sbjct: 509 LLDLGFRTDIEKIVDSLPRQRQTLLFSATIPKEVRRVSQLVLKRDHVFVDTVGLGAVETP 568
Query: 600 VKVSK 604
KV +
Sbjct: 569 TKVEQ 573
>sp|Q9FNM7|RH26_ARATH DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana
GN=RH26 PE=1 SV=2
Length = 850
Score = 287 bits (735), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/262 (54%), Positives = 191/262 (72%), Gaps = 7/262 (2%)
Query: 350 LIRKEISKNKLNGNGEKKEK-REEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEA 408
LI+K S + + E + + LS+ RFD+ +SPL++KA+ AG+ MT VQEA
Sbjct: 352 LIKKAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEA 411
Query: 409 TLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELA 468
TL L+GKD + KAKTGTGK++AFLLPAIEAV+K+ +S PPI VL++CPTRELA
Sbjct: 412 TLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELA 471
Query: 469 SQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGL 528
SQ AAEA LLK H IGV ++GGT+ +QRR++++PCQILVATPGRL DHIEN SG
Sbjct: 472 SQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGF 531
Query: 529 SVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLK 582
+ RLMG+K+LVLDEADHLLD+GFR+D+E I+ +P++RQ+ LFSAT+P+E + LK
Sbjct: 532 ATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVALK 591
Query: 583 REHTYIDTVGLGSVETPVKVSK 604
R+H +I+ V GS ET KV++
Sbjct: 592 RDHEFINCVQEGSGETHQKVTQ 613
>sp|Q0DBU5|RH31_ORYSJ DEAD-box ATP-dependent RNA helicase 31 OS=Oryza sativa subsp.
japonica GN=Os06g0526600 PE=3 SV=2
Length = 547
Score = 275 bits (703), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 154/324 (47%), Positives = 209/324 (64%), Gaps = 25/324 (7%)
Query: 292 SDDDSDIDSEDVDEKVEGWRD--VKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVE 349
S+DDS++ D D+ G+ D G +L + K P +S++ E +E V
Sbjct: 7 SEDDSELGEVDEDDGPSGFEDDLFDDEGGEKNLVESPAK--NSAPFESIKGEPIDQEGVV 64
Query: 350 LIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEAT 409
R+ +G G+ LSQ RFDEC +SPLT+K + AAGY +MT VQEAT
Sbjct: 65 HTRE-------SGGGDS--------YLSQTRFDECSLSPLTLKGVKAAGYERMTAVQEAT 109
Query: 410 LSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELAS 469
L L+GKD + KAKTGTGK++AFLLPAIE V K + PPI V+++CPTRELA
Sbjct: 110 LPIILKGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPTRELAD 169
Query: 470 QIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLS 529
Q AAEA LLK H IGV ++GGTR ++Q+R+ ++PCQILVATPGRL DH+EN G +
Sbjct: 170 QAAAEANKLLKFHPSIGVQLVIGGTRMALEQKRMHTNPCQILVATPGRLKDHMENTPGFA 229
Query: 530 VRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKR 583
RLMG+K+L+LDEAD LLD+GFR D+E IV LP++RQ+LLFSAT+P E + +KR
Sbjct: 230 TRLMGVKVLILDEADRLLDMGFRTDIERIVAALPKQRQTLLFSATVPDEVRQVCHIAMKR 289
Query: 584 EHTYIDTVGLGSVETPVKVSKYNI 607
+ +++TV GS ET +V + ++
Sbjct: 290 DLEFVNTVEEGSEETHSQVKQMHV 313
>sp|Q9FFQ1|RH31_ARATH DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis thaliana
GN=RH31 PE=2 SV=2
Length = 716
Score = 272 bits (695), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 180/247 (72%), Gaps = 6/247 (2%)
Query: 367 KEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTG 426
K + + L++ RFD +SPL++KA+ AGY MT VQEATL L+GKD + KAKTG
Sbjct: 236 KTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTG 295
Query: 427 TGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIG 486
TGK++AFLLP+IE V+K+ +S PPI L++CPTRELA+Q A EA LLK H IG
Sbjct: 296 TGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIG 355
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHL 546
V ++GGTR ++Q+R++++PCQILVATPGRL DHIEN G + RL G+K+LVLDEADHL
Sbjct: 356 VQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHL 415
Query: 547 LDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPV 600
LD+GFRKD+E I+ +P+ RQ+ LFSAT+P+E + L+R+H +++ V G++ET
Sbjct: 416 LDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQ 475
Query: 601 KVSKYNI 607
+V + ++
Sbjct: 476 QVRQMHM 482
>sp|Q94C75|RH25_ARATH DEAD-box ATP-dependent RNA helicase 25 OS=Arabidopsis thaliana
GN=RH25 PE=2 SV=2
Length = 563
Score = 271 bits (694), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 134/235 (57%), Positives = 175/235 (74%), Gaps = 6/235 (2%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+ +SPLT+K + AG+ MT VQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 77 LSKTRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLL 136
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P+IEAV+KA +S PPI VL++CPTRELA Q AAEA LLK H IGV ++GGT+
Sbjct: 137 PSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTK 196
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QRRL+ PCQILVATPGRL DHI+N SG + RLMG+K+LVLDEADHLLD+GFR+++
Sbjct: 197 LPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREI 256
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKVSK 604
E I+ +P++RQ+ LFSAT+ E + LKR+H +++ V G+ ET KVS+
Sbjct: 257 ERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQ 311
>sp|Q5ZBH5|RH25_ORYSJ DEAD-box ATP-dependent RNA helicase 25 OS=Oryza sativa subsp.
japonica GN=Os01g0618400 PE=2 SV=1
Length = 594
Score = 265 bits (677), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 130/235 (55%), Positives = 174/235 (74%), Gaps = 6/235 (2%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS RFD+C ISPL++KA+ AGY +MT+VQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 123 LSDTRFDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLL 182
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE + +S QL P I +L++CPTRELA Q+A EA LLK H +GV ++GGTR
Sbjct: 183 PAIEVLSALPNSRRDQLRPSINLLVMCPTRELAIQVAVEAKKLLKYHRSLGVQVVIGGTR 242
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QR ++++PCQILVATPGRL DH+EN G S RL G+K+LVLDEAD LLD+GFR+D+
Sbjct: 243 LTQEQRSMQANPCQILVATPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDI 302
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKVSK 604
E I+ +P+ RQ+LLFSAT+P+E + +K+ + +I+TV G ET +VS+
Sbjct: 303 ERIIASVPKERQTLLFSATVPEEVRQISHIAMKKNYKFINTVKDGDEETHAQVSQ 357
>sp|Q0JL73|RH26_ORYSJ DEAD-box ATP-dependent RNA helicase 26 OS=Oryza sativa subsp.
japonica GN=Os01g0618500 PE=2 SV=1
Length = 536
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/248 (53%), Positives = 180/248 (72%), Gaps = 13/248 (5%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+C +SPL++KA+ AGY +MT+VQEATL L+G+D + KAKTGTGK++AFLL
Sbjct: 71 LSETRFDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLL 130
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE + ST P I +L++CPTRELA+Q+AAEA LLK H +GV ++GGT+
Sbjct: 131 PAIELL------STLPRSPSINLLVICPTRELANQVAAEARKLLKYHRSLGVQVVIGGTK 184
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QR ++S+PCQILVATPGRL DH+EN G S R+ G+K+LVLDEAD LLD+GFR+D+
Sbjct: 185 LPQEQRSMQSNPCQILVATPGRLKDHLENTPGFSNRIKGVKVLVLDEADRLLDMGFRRDI 244
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKVSK-YNIY 608
E I+ +P+ RQ+LLFSAT+P+E + +KR + +I+TV G ET +VS+ Y +
Sbjct: 245 EKIIAFIPKERQTLLFSATVPEEVRQISHIAMKRGYKFINTVKEGDEETHSQVSQMYMVA 304
Query: 609 VFVLVLSI 616
L SI
Sbjct: 305 PLDLHFSI 312
>sp|Q8K9H6|DEAD_BUCAP Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=deaD PE=3 SV=1
Length = 601
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 122/203 (60%), Gaps = 12/203 (5%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
++ F G++P IK+L+ GY++ + +Q A + LEG+D + A+TG+GK+ AF LP
Sbjct: 4 TESTFSFLGLNPFIIKSLSKMGYVKPSPIQAACIPLLLEGRDVLGMAQTGSGKTAAFSLP 63
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+ + L P +L+L PTRELA Q+A K GI VL L GG R+
Sbjct: 64 LLHNL-------NINLKAP-QILVLAPTRELAVQVAEAFSDFSKYIMGIHVLPLYGGQRY 115
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+V R L P QI+V TPGRLLDH+ K G ++ L L LVLDEAD +L +GF +DVE
Sbjct: 116 EVQLRALRQGP-QIVVGTPGRLLDHL--KRG-TLNLSNLYALVLDEADEMLRMGFIEDVE 171
Query: 557 NIVDCLPRRRQSLLFSATMPKEL 579
I+ +P+ Q+ LFSATMP+ +
Sbjct: 172 TIMSQIPKEHQTALFSATMPEAI 194
>sp|Q13206|DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10 OS=Homo sapiens GN=DDX10
PE=1 SV=2
Length = 875
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 122/200 (61%), Gaps = 9/200 (4%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + ++
Sbjct: 185 AERINN--INILVCTPGRLLQHMD--ETVSFHATDLQMLVLDEADRILDMGFADTMNAVI 240
Query: 560 DCLPRRRQSLLFSATMPKEL 579
+ LP++RQ+LLFSAT K +
Sbjct: 241 ENLPKKRQTLLFSATQTKSV 260
>sp|Q0INC5|RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp.
japonica GN=Os12g0481100 PE=2 SV=2
Length = 802
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 9/199 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E +S ++A A GY + T +Q A + L G+D A TG+GK+ AF LP +E
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLER 255
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L + VP I VLIL PTRELA+Q+ + I L I +VGG KV +
Sbjct: 256 LL-----FRPKRVPAIRVLILTPTRELAAQVHS-MIEKLAQFTDIRCCLIVGGLSTKVQE 309
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L S P I+VATPGR++DH+ N LSV L L +L+LDEAD LL+LGF +++ ++
Sbjct: 310 VALRSMP-DIVVATPGRIIDHLRN--SLSVGLEDLAILILDEADRLLELGFSAEIQELIR 366
Query: 561 CLPRRRQSLLFSATMPKEL 579
PRRRQ++LFSATM +E+
Sbjct: 367 MCPRRRQTMLFSATMTEEI 385
>sp|Q80Y44|DDX10_MOUSE Probable ATP-dependent RNA helicase DDX10 OS=Mus musculus GN=Ddx10
PE=1 SV=2
Length = 875
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 120/198 (60%), Gaps = 9/198 (4%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMD--ETICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPK 577
+ LP++RQ+LLFSAT K
Sbjct: 241 ENLPKKRQTLLFSATQTK 258
>sp|P57453|DEAD_BUCAI Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=deaD PE=3 SV=1
Length = 601
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 119/199 (59%), Gaps = 12/199 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G++P I++L GY++ + +Q + + LEG+D + A+TG+GK+ AF LP +
Sbjct: 8 FSFLGLNPFIIQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHN 67
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ L P +L+L PTRELA Q+A K GI VL L GG R+++
Sbjct: 68 L-------NINLKAP-QILVLAPTRELAVQVAEAFSDFSKYMIGIHVLPLYGGQRYELQL 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L P QI+V TPGRLLDH+ K G ++ L L LVLDEAD +L +GF +DVE I+
Sbjct: 120 RALRQGP-QIVVGTPGRLLDHL--KRG-TLNLSNLHGLVLDEADEMLRMGFIEDVETIMA 175
Query: 561 CLPRRRQSLLFSATMPKEL 579
+P+ Q+ LFSATMP+ +
Sbjct: 176 QIPKEHQTALFSATMPEAI 194
>sp|A3LNR6|HAS1_PICST ATP-dependent RNA helicase HAS1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=HAS1 PE=3 SV=2
Length = 567
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 148/256 (57%), Gaps = 31/256 (12%)
Query: 339 EDEHDFEEQVELIRKEIS--KNKLNGNGEKKEKREEEPIL--------------SQKRFD 382
E + DF+E ++ +++ + K E+K KR+EE +F+
Sbjct: 47 ELDEDFDEVANMLGADVTDPEEKKQSKLERKRKRDEEATAEYTKPEVVDNEDDAQNDKFE 106
Query: 383 ECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV- 441
+ G+S T++A++ G+ MT+VQ T+ L GKD + AKTG+GK++AFL+PAIE +
Sbjct: 107 DAGLSEPTMRAISDMGFKTMTKVQAKTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIELLY 166
Query: 442 -LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRFKVD 499
LK + T V+++ PTRELA QI A L+ +H G+ ++GG + +
Sbjct: 167 SLKFKPRNGTG------VIVVSPTRELALQIFGVARELMAHHTQTFGI--VIGGANRRQE 218
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+L + +L+ATPGRLLDH++N G + LK LV+DEAD +L++GF ++++ I+
Sbjct: 219 AEKL-AKGVNLLIATPGRLLDHLQNTQGFVFK--NLKALVIDEADRILEIGFEEEMKQII 275
Query: 560 DCLPR-RRQSLLFSAT 574
LP+ RQS+LFSAT
Sbjct: 276 KILPKEERQSMLFSAT 291
>sp|Q9NVP1|DDX18_HUMAN ATP-dependent RNA helicase DDX18 OS=Homo sapiens GN=DDX18 PE=1 SV=2
Length = 670
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 127/207 (61%), Gaps = 18/207 (8%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL----- 244
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L +
Sbjct: 245 -RFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-GNG 301
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 302 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 359
Query: 568 SLLFSATMPKE------LVLKREHTYI 588
++LFSAT ++ + LK+E Y+
Sbjct: 360 TMLFSATQTRKVEDLARISLKKEPLYV 386
>sp|Q5B5E7|RRP3_EMENI ATP-dependent rRNA helicase rrp3 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rrp3 PE=3 SV=1
Length = 465
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 136/252 (53%), Gaps = 26/252 (10%)
Query: 372 EEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSI 431
EEP K F E GI +A GY T +Q + LEG+D + A+TG+GK+
Sbjct: 40 EEPA-PAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTA 98
Query: 432 AFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLV 491
AF LP ++A+++A + ++ L+L PTRELA QI ++A L + G+ +V
Sbjct: 99 AFALPMLQALMEAPQT--------LFGLVLAPTRELAYQI-SQAFETLGSTIGVRCAVIV 149
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GG L P I+VATPGRLLDH+EN G S+R LK L +DEAD LLD+ F
Sbjct: 150 GGMDMVAQSIALGKKP-HIIVATPGRLLDHLENTKGFSLR--NLKYLAIDEADRLLDMDF 206
Query: 552 RKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKVSKYNIYVFV 611
+ ++ I+ LPR R + LFSATM T ++++ S+ PV+VS + Y V
Sbjct: 207 GESLDKIIRILPRTRHTYLFSATM---------STKVESLQRASLSNPVRVSVSSKYQTV 257
Query: 612 LVLSIKIQAFYI 623
L Q+ YI
Sbjct: 258 STL----QSSYI 265
>sp|Q54Q94|DDX10_DICDI Probable ATP-dependent RNA helicase ddx10 OS=Dictyostelium
discoideum GN=ddx10 PE=3 SV=1
Length = 878
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 149/272 (54%), Gaps = 19/272 (6%)
Query: 363 NGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVK 422
N ++KEK + S F + IS LT+KALT + ++++T +Q A+L L G+D +
Sbjct: 125 NDKEKEKEYKIDYPSATDFKDLPISQLTLKALTESKFLKLTDIQRASLPHTLCGRDILGA 184
Query: 423 AKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH 482
AKTG+GK+++F+LP +E + + I ++L PTRELA QI A+ K H
Sbjct: 185 AKTGSGKTLSFILPILETLWRNRWGRDDG----IGAIVLSPTRELAIQIFDVLKAVGKYH 240
Query: 483 DGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDE 542
L ++GG V Q + + + IL+ATPGRLL H++ G LK+LVLDE
Sbjct: 241 TFSAGL-IIGGRN--VQQEKDKINAMNILIATPGRLLQHMDETYGFDCS--NLKILVLDE 295
Query: 543 ADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVE 597
AD +LDLGF K + +IV+ LPR RQ+LLFSAT K + + +E YI
Sbjct: 296 ADRILDLGFSKCLNSIVENLPRERQTLLFSATQTKSIRDLARLSLQEPEYISVYEKDITT 355
Query: 598 TPVKVSKYNIYVFVLVLSIKIQAFYIICFVYT 629
TP N+ + V+ ++++ + F+ T
Sbjct: 356 TP-----QNLTQTLCVIPLEMKLNMLFSFIKT 382
>sp|Q89AF9|DEAD_BUCBP Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=deaD PE=3 SV=1
Length = 602
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 116/199 (58%), Gaps = 12/199 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G++ I AL GY+Q + +Q A + ++GKD + A+TG+GK+ AF LP +
Sbjct: 8 FSSFGLNSCIITALNDIGYVQPSPIQAACIPYLIKGKDVLGMAQTGSGKTAAFALPLLHN 67
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ VP I L+L PTRELA Q+A K G+ VL L GG R+ +
Sbjct: 68 I------KLDVRVPQI--LVLTPTRELAVQVAEAFSNFSKKLIGVHVLALYGGQRYDLQL 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L P QI+V TPGRLLDH++ ++ + L L LVLDEAD +L +GF +DVE I+
Sbjct: 120 KSLRKGP-QIIVGTPGRLLDHLKRRT---LSLSNLHSLVLDEADEMLRMGFIEDVETIMT 175
Query: 561 CLPRRRQSLLFSATMPKEL 579
+P R Q+ LFSATMP+ +
Sbjct: 176 EIPDRHQTALFSATMPEAI 194
>sp|Q9SB89|RH27_ARATH DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana
GN=RH27 PE=2 SV=2
Length = 633
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 125/202 (61%), Gaps = 12/202 (5%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I++ K F+ +S T K++ G+ +MT++Q + + G+D + A+TG+GK++AFL
Sbjct: 150 IMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFL 209
Query: 435 LPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+PA+E + +K T + T VL++CPTRELA Q A LLK H V ++G
Sbjct: 210 IPAVELLYRVKFTPRNGTG------VLVICPTRELAIQSYGVAKELLKYHSQT-VGKVIG 262
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G + K + L + +LVATPGRLLDH+EN +G + LK LV+DEAD +L+ F
Sbjct: 263 GEKRKTEAEIL-AKGVNLLVATPGRLLDHLENTNGFIFK--NLKFLVMDEADRILEQNFE 319
Query: 553 KDVENIVDCLPRRRQSLLFSAT 574
+D++ I++ LP+ RQ+ LFSAT
Sbjct: 320 EDLKKILNLLPKTRQTSLFSAT 341
>sp|Q8K363|DDX18_MOUSE ATP-dependent RNA helicase DDX18 OS=Mus musculus GN=Ddx18 PE=2 SV=1
Length = 660
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 123/207 (59%), Gaps = 18/207 (8%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ +MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 180 TLKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVK------ 233
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L + G R Q+ L
Sbjct: 234 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNG-- 291
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 292 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPARRQ 349
Query: 568 SLLFSATMPKE------LVLKREHTYI 588
++LFSAT ++ + LK+E Y+
Sbjct: 350 TMLFSATQTRKVEDLARISLKKEPLYV 376
>sp|P21693|DBPA_ECOLI ATP-independent RNA helicase DbpA OS=Escherichia coli (strain K12)
GN=dbpA PE=1 SV=2
Length = 457
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 115/197 (58%), Gaps = 18/197 (9%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF---LLPAIEAVL 442
+ P + L GY+ MT VQ A L A L GKD V+AKTG+GK+ AF LL I+A L
Sbjct: 10 LPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASL 69
Query: 443 KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
T + L+LCPTRELA Q+A E L + +LTL GG F + +
Sbjct: 70 FQTQA-----------LVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDS 118
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L+ P I+VATPGRLLDH++ + V L L LV+DEAD +LD+GF +++++
Sbjct: 119 LQHAP-HIIVATPGRLLDHLQKGT---VSLDALNTLVMDEADRMLDMGFSDAIDDVIRFA 174
Query: 563 PRRRQSLLFSATMPKEL 579
P RQ+LLFSAT P+ +
Sbjct: 175 PASRQTLLFSATWPEAI 191
>sp|Q9HXE5|RHLB_PSEAE ATP-dependent RNA helicase RhlB OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=rhlB
PE=3 SV=1
Length = 397
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 124/210 (59%), Gaps = 7/210 (3%)
Query: 373 EPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
EP + RF + ++P + A+ G+ T +Q L L G+DA+ +A+TGTGK+ A
Sbjct: 3 EPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAA 62
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
FL+ I +L+ + P LI+ PTREL QIA +A AL K + G+ V+T VG
Sbjct: 63 FLISIITQLLQTPPPKERYMGEP-RALIIAPTRELVVQIAKDAAALTK-YTGLNVMTFVG 120
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G F ++LE+ C ILVATPGRLLD N+ G V L ++++VLDEAD +LD+GF
Sbjct: 121 GMDFDKQLKQLEARFCDILVATPGRLLDF--NQRG-EVHLDMVEVMVLDEADRMLDMGFI 177
Query: 553 KDVENIVDCLPRR--RQSLLFSATMPKELV 580
V I+ P + RQ+LLFSAT +++
Sbjct: 178 PQVRQIIRQTPHKGERQTLLFSATFTDDVM 207
>sp|Q02S21|RHLB_PSEAB ATP-dependent RNA helicase RhlB OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=rhlB PE=3 SV=1
Length = 397
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 124/210 (59%), Gaps = 7/210 (3%)
Query: 373 EPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
EP + RF + ++P + A+ G+ T +Q L L G+DA+ +A+TGTGK+ A
Sbjct: 3 EPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAA 62
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
FL+ I +L+ + P LI+ PTREL QIA +A AL K + G+ V+T VG
Sbjct: 63 FLISIITQLLQTPPPKERYMGEP-RALIIAPTRELVVQIAKDAAALTK-YTGLNVMTFVG 120
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G F ++LE+ C ILVATPGRLLD N+ G V L ++++VLDEAD +LD+GF
Sbjct: 121 GMDFDKQLKQLEARFCDILVATPGRLLDF--NQRG-EVHLDMVEVMVLDEADRMLDMGFI 177
Query: 553 KDVENIVDCLPRR--RQSLLFSATMPKELV 580
V I+ P + RQ+LLFSAT +++
Sbjct: 178 PQVRQIIRQTPHKGERQTLLFSATFTDDVM 207
>sp|B7UUT0|RHLB_PSEA8 ATP-dependent RNA helicase RhlB OS=Pseudomonas aeruginosa (strain
LESB58) GN=rhlB PE=3 SV=1
Length = 397
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 124/210 (59%), Gaps = 7/210 (3%)
Query: 373 EPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
EP + RF + ++P + A+ G+ T +Q L L G+DA+ +A+TGTGK+ A
Sbjct: 3 EPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAA 62
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
FL+ I +L+ + P LI+ PTREL QIA +A AL K + G+ V+T VG
Sbjct: 63 FLISIITQLLQTPPPKERYMGEP-RALIIAPTRELVVQIAKDAAALTK-YTGLNVMTFVG 120
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G F ++LE+ C ILVATPGRLLD N+ G V L ++++VLDEAD +LD+GF
Sbjct: 121 GMDFDKQLKQLEARFCDILVATPGRLLDF--NQRG-EVHLDMVEVMVLDEADRMLDMGFI 177
Query: 553 KDVENIVDCLPRR--RQSLLFSATMPKELV 580
V I+ P + RQ+LLFSAT +++
Sbjct: 178 PQVRQIIRQTPHKGERQTLLFSATFTDDVM 207
>sp|Q6C7D2|HAS1_YARLI ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=HAS1 PE=3 SV=1
Length = 605
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 124/200 (62%), Gaps = 14/200 (7%)
Query: 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
+K F +S T+++L G+ MT VQE T+ L G+D + AKTG+GK++AFL+PA
Sbjct: 130 RKPFSTIPLSENTMQSLKDMGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPA 189
Query: 438 IEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGT 494
IE + LK + T V+++ PTRELA QI A L+ NH +G+ ++GG
Sbjct: 190 IEMLRKLKFKPRNGTG------VIVVSPTRELALQIYGVARDLMANHSQTLGI--VIGGN 241
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
+ ++ +L +LV TPGRLLDH++N G + LK L++DEAD +L++GF ++
Sbjct: 242 NRRQEEEKLNKG-VNLLVCTPGRLLDHLQNSQGFVFK--NLKALIIDEADRILEIGFEQE 298
Query: 555 VENIVDCLPRRRQSLLFSAT 574
++ I+ LP+ RQS+LFSAT
Sbjct: 299 MKEIIKILPKERQSMLFSAT 318
>sp|Q887N8|RHLB_PSESM ATP-dependent RNA helicase RhlB OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=rhlB PE=3 SV=1
Length = 397
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 125/210 (59%), Gaps = 7/210 (3%)
Query: 373 EPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
EP + RF + ++P + A+ G+ T +Q L L+GKDA+ +A+TGTGK+ A
Sbjct: 2 EPQEGKTRFHDFNLAPELMHAIQDLGFPYCTPIQAGVLGFTLKGKDAIGRAQTGTGKTAA 61
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
FL+ IE + + + + P LI+ PTREL QIA +A L K + + V+T VG
Sbjct: 62 FLISIIEQLTQTPPPAERYMGEP-RALIIAPTRELVVQIAKDAADLTK-YTNLNVMTFVG 119
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G F ++LE+ C ILVATPGRLLD N+ G V L ++++VLDEAD +LD+GF
Sbjct: 120 GMDFDKQLKQLEARHCDILVATPGRLLDF--NQRG-EVHLDMVEVMVLDEADRMLDMGFI 176
Query: 553 KDVENIVDCLPRR--RQSLLFSATMPKELV 580
V I+ P + RQ+LLFSAT ++++
Sbjct: 177 PQVRQIIRQTPHKGERQTLLFSATFTEDVM 206
>sp|P0A4D8|EXP9_STRR6 Probable ATP-dependent RNA helicase exp9 OS=Streptococcus
pneumoniae (strain ATCC BAA-255 / R6) GN=exp9 PE=3 SV=1
Length = 524
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 122/197 (61%), Gaps = 13/197 (6%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F+E +S + + AG+++ + +QE T+ LEGKD + +A+TGTGK+ AF LP +E
Sbjct: 2 KFNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLE 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ T +T Q L++ PTRELA Q + E + G+ V ++ GG+ +
Sbjct: 62 KI--RTEEATIQ------ALVIAPTRELAVQ-SQEELFRFGRSKGVKVRSVYGGSSIEKQ 112
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L+S I+V TPGRLLD I+ K +++L ++ L+LDEAD +L++GF +D+E I+
Sbjct: 113 IKALKSG-AHIVVGTPGRLLDLIKRK---ALKLQDIETLILDEADEMLNMGFLEDIEAII 168
Query: 560 DCLPRRRQSLLFSATMP 576
+P RQ+LLFSATMP
Sbjct: 169 SRVPENRQTLLFSATMP 185
>sp|P0A4D7|EXP9_STRPN Probable ATP-dependent RNA helicase exp9 OS=Streptococcus
pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
GN=exp9 PE=3 SV=1
Length = 524
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 122/197 (61%), Gaps = 13/197 (6%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F+E +S + + AG+++ + +QE T+ LEGKD + +A+TGTGK+ AF LP +E
Sbjct: 2 KFNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLE 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ T +T Q L++ PTRELA Q + E + G+ V ++ GG+ +
Sbjct: 62 KI--RTEEATIQ------ALVIAPTRELAVQ-SQEELFRFGRSKGVKVRSVYGGSSIEKQ 112
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L+S I+V TPGRLLD I+ K +++L ++ L+LDEAD +L++GF +D+E I+
Sbjct: 113 IKALKSG-AHIVVGTPGRLLDLIKRK---ALKLQDIETLILDEADEMLNMGFLEDIEAII 168
Query: 560 DCLPRRRQSLLFSATMP 576
+P RQ+LLFSATMP
Sbjct: 169 SRVPENRQTLLFSATMP 185
>sp|Q5ZJF6|DDX10_CHICK Probable ATP-dependent RNA helicase DDX10 OS=Gallus gallus GN=DDX10
PE=2 SV=1
Length = 875
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 118/199 (59%), Gaps = 9/199 (4%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+RF + +S T+K L A Y +T +Q T+ L+GKD + AKTG+GK++AF++PA+
Sbjct: 73 QRFSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPAL 132
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + +S L VLI+ PTRELA Q + KNHD L ++GG K
Sbjct: 133 ELLYRLQWTSADGLG----VLIISPTRELAFQTFKVLRKVGKNHDFSAGL-IIGGKDLKE 187
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ R+ +L+ TPGRLL H++ S L+ML+LDEAD +LD+GF + I
Sbjct: 188 ESERIHH--INMLICTPGRLLQHMDETSYFYAS--DLQMLILDEADRILDMGFADTMNAI 243
Query: 559 VDCLPRRRQSLLFSATMPK 577
++ LP++RQ+LLFSAT K
Sbjct: 244 IENLPKKRQTLLFSATQTK 262
>sp|A5DID7|HAS1_PICGU ATP-dependent RNA helicase HAS1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=HAS1 PE=3 SV=2
Length = 569
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 127/203 (62%), Gaps = 23/203 (11%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F++ G+S T++A+ G+ +MT+VQE T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 106 KFEDLGLSEPTMRAIKDMGFEKMTKVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE 165
Query: 440 AV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRF 496
+ LK + T V+++ PTRELA QI A L+ +H +G+ ++GG
Sbjct: 166 MLYSLKFKPRNGTG------VIVVSPTRELALQIFGVARDLMAHHSQTLGI--VIGGA-- 215
Query: 497 KVDQRRLESDP----CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
RR E+D +L+ATPGRLLDH++N G + LK LV+DEAD +L++GF
Sbjct: 216 ---NRRQEADKLMKGVNLLIATPGRLLDHLQNTKGFIFK--NLKALVIDEADRILEIGFE 270
Query: 553 KDVENIVDCLPR-RRQSLLFSAT 574
+++ I+ LP RQS+LFSAT
Sbjct: 271 DEMKQIIKVLPSDERQSMLFSAT 293
>sp|P0CR00|RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RRP3 PE=3 SV=1
Length = 484
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 130/234 (55%), Gaps = 30/234 (12%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + GISP +A + G+ + + +Q + LEGKD + A+TG+GK+ AF LP +
Sbjct: 38 KTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPIL 97
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT--LVGGTRF 496
+ + + P + L+L PTRELA QI+ + +L GIGV T LVGG
Sbjct: 98 QTLWENPQ--------PFFALVLAPTRELAYQISQQVTSL---GSGIGVRTAVLVGGMDM 146
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
L P I+VATPGRL+DH+EN G S++ LK LV+DEAD LLDL F ++
Sbjct: 147 MSQSIALSKRP-HIIVATPGRLMDHLENTKGFSLK--SLKYLVMDEADRLLDLDFGPIID 203
Query: 557 NIVDCLPRRRQSLLFSATMPKELV-LKREHTYIDTVGLGSVETPVKV---SKYN 606
I+ +P+ R + LFSATM ++ L+R S+ PV+V SKY+
Sbjct: 204 KILKVIPKERNTYLFSATMTTKVAKLQR----------ASLNKPVRVEVSSKYS 247
>sp|P0CR01|RRP3_CRYNB ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RRP3 PE=3 SV=1
Length = 484
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 130/234 (55%), Gaps = 30/234 (12%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + GISP +A + G+ + + +Q + LEGKD + A+TG+GK+ AF LP +
Sbjct: 38 KTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPIL 97
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT--LVGGTRF 496
+ + + P + L+L PTRELA QI+ + +L GIGV T LVGG
Sbjct: 98 QTLWENPQ--------PFFALVLAPTRELAYQISQQVTSL---GSGIGVRTAVLVGGMDM 146
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
L P I+VATPGRL+DH+EN G S++ LK LV+DEAD LLDL F ++
Sbjct: 147 MSQSIALSKRP-HIIVATPGRLMDHLENTKGFSLK--SLKYLVMDEADRLLDLDFGPIID 203
Query: 557 NIVDCLPRRRQSLLFSATMPKELV-LKREHTYIDTVGLGSVETPVKV---SKYN 606
I+ +P+ R + LFSATM ++ L+R S+ PV+V SKY+
Sbjct: 204 KILKVIPKERNTYLFSATMTTKVAKLQR----------ASLNKPVRVEVSSKYS 247
>sp|Q74Z73|HAS1_ASHGO ATP-dependent RNA helicase HAS1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=HAS1
PE=3 SV=2
Length = 504
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 124/199 (62%), Gaps = 15/199 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+FDE +S T+KA+ G+ +MT+VQ T+ + G+D + AKTG+GK++AFLLPAIE
Sbjct: 40 KFDELNLSSQTLKAIGKMGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIE 99
Query: 440 AV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRF 496
+ LK + T V+++ PTRELA QI A L++ H G+ ++GG
Sbjct: 100 MLHSLKFKPRNGTG------VIVITPTRELALQIFGVARELMEFHSQTFGI--VIGGANR 151
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ + +L + +L+ATPGRLLDH++N G + LK LV+DEAD +L++GF +++
Sbjct: 152 RQEAEKL-AKGVNLLIATPGRLLDHLQNTKGFVFK--NLKALVIDEADRILEIGFEDEMK 208
Query: 557 NIVDCLPRR-RQSLLFSAT 574
I+ LP RQS+LFSAT
Sbjct: 209 QIIKILPNEDRQSMLFSAT 227
>sp|Q0UR48|HAS1_PHANO ATP-dependent RNA helicase HAS1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=HAS1 PE=3 SV=1
Length = 610
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 120/198 (60%), Gaps = 14/198 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RFDE +S T++A+ G+ MT +Q + L GKD + AKTG+GK++AFL+PAIE
Sbjct: 132 RFDELNLSERTMEAIKTMGFESMTEIQRKAIPPLLSGKDVLGAAKTGSGKTLAFLIPAIE 191
Query: 440 AVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRF 496
+ S+ + P V+++ PTRELA QI A L++ H G+ ++GG
Sbjct: 192 ML------SSMRFKPRNGTGVIVVSPTRELALQIFGVARELMEKHSQTFGI--VIGGANR 243
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ + +L + +L+ATPGRLLDH+ N G + LK L++DEAD +L++GF ++
Sbjct: 244 RAEAEKL-AKGVNLLIATPGRLLDHLHNTQGFVFK--NLKSLIIDEADRILEVGFEDEMR 300
Query: 557 NIVDCLPRRRQSLLFSAT 574
+I+ LP RQ++LFSAT
Sbjct: 301 SIIKILPTDRQTMLFSAT 318
>sp|Q54S03|DDX18_DICDI Probable ATP-dependent RNA helicase ddx18 OS=Dictyostelium
discoideum GN=ddx18 PE=3 SV=1
Length = 602
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 123/202 (60%), Gaps = 14/202 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F I T K++ G+ +MT +Q ++ LEGKD + A+TG+GK++AFL+PAIE
Sbjct: 121 FSNLPIEENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEV 180
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH---DGIGVLTLVGGTRFK 497
++K+ V+I+ PTRELA QI A L+K H GI ++GG K
Sbjct: 181 LVKSNFKPRNG----TGVIIISPTRELALQIYGVARELMKYHTQTHGI----VIGGASKK 232
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
++ RLE +LVATPGRLLDH++N G + LK L++DEAD +L++GF +++
Sbjct: 233 PEEERLEKG-VNLLVATPGRLLDHLQNTKGFITK--NLKCLIIDEADRILEVGFEEEMHQ 289
Query: 558 IVDCLPRRRQSLLFSATMPKEL 579
I+ +P+ RQ++LFSAT +++
Sbjct: 290 IIKKVPKTRQTMLFSATQTRKV 311
>sp|Q761Z9|RH18_ORYSJ DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp.
japonica GN=Os01g0164500 PE=1 SV=2
Length = 647
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 15/204 (7%)
Query: 377 SQKRFDEC--GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+++RF E +SP +KAL G+ + T VQ A + L KD V A TG+GK++AF+
Sbjct: 19 TEQRFSELSPALSPEVVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFV 78
Query: 435 LPAIEAVLKATSSSTTQLVPP----IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
+P +E + + S PP + +I+ PTREL+SQI A G+ + L
Sbjct: 79 VPVVEILRRRPS-------PPKPHEVLGIIISPTRELSSQIYNVAQPFFATLKGVSSMLL 131
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
VGG K + ++LE + ILV TPG+L D +E L+ + L++L+LDEAD LLDLG
Sbjct: 132 VGGFDIKAELKKLEEEGANILVGTPGKLFDVMERLDTLNYK--NLEILILDEADRLLDLG 189
Query: 551 FRKDVENIVDCLPRRRQSLLFSAT 574
F+K + +I+ LP+ R++ LFSAT
Sbjct: 190 FQKQITSIISKLPKLRRTGLFSAT 213
>sp|Q75C76|DBP4_ASHGO ATP-dependent RNA helicase DBP4 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP4
PE=3 SV=2
Length = 763
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 9/219 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS T+K L A YI+MT +Q A + L+G D + AKTG+GK++AFL+P +E
Sbjct: 43 FQDLPISSGTVKGLKEAAYIKMTDIQRAAIPVALKGHDVLGAAKTGSGKTLAFLVPVLE- 101
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
K T+L + L++ PTRELA QI E + + + ++GG K +
Sbjct: 102 --KLYHERWTEL-DGLGALVISPTRELAMQI-YEVLVKIGKYMSFSAGLVIGGKDVKFEM 157
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ IL+ TPGRLL H++ GL+ L++LVLDEAD LD+GF+K ++ IV
Sbjct: 158 ERVSK--INILIGTPGRLLQHMDQSVGLNTS--NLQILVLDEADRCLDMGFKKALDAIVS 213
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETP 599
LP RQ+LLFSAT + L + D +G+++ P
Sbjct: 214 NLPPSRQTLLFSATQSQSLADLARLSLADYKTVGTMDGP 252
>sp|Q9LIH9|RH51_ARATH DEAD-box ATP-dependent RNA helicase 51 OS=Arabidopsis thaliana
GN=RH51 PE=2 SV=1
Length = 568
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 119/200 (59%), Gaps = 8/200 (4%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I++ FD +S T A+ G+ MT++Q ++ LEGKD + A+TG+GK++AFL
Sbjct: 85 IMTNVTFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFL 144
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+PA+E + K S V+++CPTRELA Q A LLK+H V ++GG
Sbjct: 145 IPAVELLFKERFSPRN----GTGVIVICPTRELAIQTKNVAEELLKHHSQT-VSMVIGGN 199
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
+ + +R+ S +++ATPGRLLDH++N + LK LV+DEAD +L+ F +D
Sbjct: 200 NRRSEAQRIASG-SNLVIATPGRLLDHLQNTKAFIYK--HLKCLVIDEADRILEENFEED 256
Query: 555 VENIVDCLPRRRQSLLFSAT 574
+ I+ LP+ RQ+ LFSAT
Sbjct: 257 MNKILKILPKTRQTALFSAT 276
>sp|Q2UNB7|RRP3_ASPOR ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rrp3 PE=3 SV=1
Length = 472
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 145/276 (52%), Gaps = 28/276 (10%)
Query: 328 KITKRVPLKSLEDEHDFEEQVELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGIS 387
KI + P + ED D E S++ E++++ E P + K F E G+
Sbjct: 8 KIAREAPQQ--EDHSDSEAH-----SSASEDAAPNTTEQEQEPSEAPKQAPKSFKELGLI 60
Query: 388 PLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSS 447
+A + GY T +Q + L+G+D + A+TG+GK+ AF LP ++A++ SS
Sbjct: 61 EQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKPSS 120
Query: 448 STTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ L+L PTRELA QI ++A L + + LVGG L P
Sbjct: 121 --------FFGLVLAPTRELAYQI-SQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKP 171
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH+EN G S+R LK LV+DEAD LLD+ F ++ I+ LPR R+
Sbjct: 172 -HIIVATPGRLLDHLENTKGFSLR--NLKYLVMDEADRLLDMDFGPILDKILKVLPRERR 228
Query: 568 SLLFSATMPKELVLKREHTYIDTVGLGSVETPVKVS 603
+ LFSATM + ++++ S++ P++V+
Sbjct: 229 TYLFSATMSSK---------VESLQRASLQNPLRVA 255
>sp|Q84T03|RH27_ORYSJ DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp.
japonica GN=Os03g0802700 PE=3 SV=1
Length = 590
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 121/208 (58%), Gaps = 14/208 (6%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
IL+ F E G+S T +A+ Y +T++Q ++ L GKD + AKTG+GK++AFL
Sbjct: 92 ILTNMLFSELGVSEPTARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFL 151
Query: 435 LPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLV 491
+PAIE + A +P V+++CPTRELA Q A L+K H +G +
Sbjct: 152 IPAIEMLHHA------HFMPRNGTGVVVVCPTRELAIQTHNVAKELMKYHSQTLGYIIGG 205
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
G R + DQ + +LVATPGRLLDH++N G R LK L++DEAD LL+ F
Sbjct: 206 NGRRGEADQL---AKGVNLLVATPGRLLDHLQNTKGFIYRR--LKCLIIDEADRLLEQNF 260
Query: 552 RKDVENIVDCLPRRRQSLLFSATMPKEL 579
+D++ I LP RQ++LFSAT +++
Sbjct: 261 EEDMKQIFKRLPLNRQTVLFSATQTEQV 288
>sp|Q54TJ4|DDX27_DICDI Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium
discoideum GN=ddx27 PE=3 SV=1
Length = 783
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 123/222 (55%), Gaps = 18/222 (8%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E +S +KA+ G+ Q T +Q + L GKD + A TG+GK+ AFLLP +E
Sbjct: 192 FEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLER 251
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S I VLIL PTRELA Q + + L I +VGG K +
Sbjct: 252 LLFRDSEYRA-----IRVLILLPTRELALQCQS-VMENLAQFSNITSCLIVGGLSNKAQE 305
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L P +++ATPGRL+DH+ N G+ L L++L+LDEAD LLD+GF+ ++ IV+
Sbjct: 306 VELRKSP-DVVIATPGRLIDHLLNAHGIG--LDDLEILILDEADRLLDMGFKDEINKIVE 362
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKV 602
P RQ++LFSAT+ E + T+ S++ P++V
Sbjct: 363 SCPTNRQTMLFSATLNDE---------VKTLAKLSLQQPIRV 395
>sp|Q4L7W0|Y956_STAHJ Probable DEAD-box ATP-dependent RNA helicase SH0956
OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=SH0956 PE=3 SV=1
Length = 503
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 122/200 (61%), Gaps = 15/200 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E GIS T++ L A G+ + T +Q+ ++ LEGKD + +A+TGTGK+ AF +P IE
Sbjct: 4 FKELGISDKTVETLEAMGFKEPTPIQKDSIPYTLEGKDILGQAQTGTGKTGAFGIPLIEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V+ + + LIL PTRELA Q+ AE + + V+T+ GG
Sbjct: 64 VVGQSG---------VQALILAPTRELAMQV-AEQLREFSRGQNVQVVTVFGGMPIDRQI 113
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L+ P QI+V TPGR++DH+ + +++ G+ L+LDEAD ++++GF D+ I+D
Sbjct: 114 KALKRGP-QIVVGTPGRVIDHLNRR---TLKTNGIHTLILDEADEMMNMGFIDDMRFIMD 169
Query: 561 CLP-RRRQSLLFSATMPKEL 579
+P +RQ++LFSATMPK +
Sbjct: 170 KIPAEQRQTMLFSATMPKAI 189
>sp|A5DY34|DRS1_LODEL ATP-dependent RNA helicase DRS1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DRS1 PE=3 SV=1
Length = 686
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 136/240 (56%), Gaps = 18/240 (7%)
Query: 365 EKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAK 424
E +E L K F E +S +K+L G+ T VQ +T+ L GKD V A+
Sbjct: 182 ESQETNTSASALKSKTFQELQLSRPILKSLQQLGFTVPTPVQASTIPIALLGKDIVASAQ 241
Query: 425 TGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG 484
TG+GK+ A+L+P IE +L +S++T+ +IL PTRELA Q+ L +
Sbjct: 242 TGSGKTAAYLIPIIERLLYVKNSTSTK------AIILTPTRELAIQVHDVGRKLGQFVSN 295
Query: 485 IGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEAD 544
+ VGG K +++L++ P I++ATPGRL+DHI N SV +++L++DEAD
Sbjct: 296 LNFGMAVGGLSLKQQEQQLKTRP-DIVIATPGRLIDHIRNSPSFSVE--DVQVLIIDEAD 352
Query: 545 HLLDLGFRKDVENIVDCLPR-RRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKVS 603
+L+ GF++++ I+ +P+ +RQ+LLFSATM +T I + S+ P+KVS
Sbjct: 353 RMLEEGFQEELTEILSLIPKQKRQTLLFSATM--------NNTKIQDLVQLSLNKPIKVS 404
>sp|A5DQF1|RRP3_PICGU ATP-dependent rRNA helicase RRP3 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=RRP3 PE=3 SV=2
Length = 475
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 126/229 (55%), Gaps = 23/229 (10%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E + P ++A+ Y + T +Q + LEGKD + A+TG+GK+ AF +P +++
Sbjct: 66 FSELNLVPELMEAIEKLKYTKPTPIQSGAIPHALEGKDIIGLAQTGSGKTAAFAIPILQS 125
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ +A P Y L+L PTRELA QI E L + G+ + +VGG
Sbjct: 126 LWEAQR--------PYYALVLAPTRELAYQI-KETFDALGSGMGVRSVCIVGGMDMMDQA 176
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L P ILVATPGR++DH+EN G S++ L+ LV+DEAD LLD+ F ++ I+
Sbjct: 177 RDLMRKP-HILVATPGRIMDHLENTKGFSLK--SLQYLVMDEADRLLDMDFGPALDKILK 233
Query: 561 CLPRRRQSLLFSATMPKELV-LKREHTYIDTVGLGSVETPVKVSKYNIY 608
+P +R + LFSATM ++ L+R S+ PVKV+ N Y
Sbjct: 234 VIPTKRTTYLFSATMTNKIAKLQR----------ASLHEPVKVAVSNKY 272
>sp|Q6BH93|HAS1_DEBHA ATP-dependent RNA helicase HAS1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=HAS1 PE=3 SV=1
Length = 568
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 123/197 (62%), Gaps = 13/197 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E G+S T+KA+ G+ +MT+VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 106 FEEAGLSEPTLKAIKDMGFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 165
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ L+ + T V+++ PTRELA QI A L+ +H + + G R +
Sbjct: 166 LYSLRFKPRNGTG------VVVVSPTRELALQIFGVARELMAHHSQTFGIVIGGANRRQE 219
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
++ ++ +L+ATPGRLLDH++N G + +K LV+DEAD +L++GF ++++ I
Sbjct: 220 AEKLMKG--VNLLIATPGRLLDHLQNTQGFVFK--NVKALVIDEADRILEIGFEEEMKQI 275
Query: 559 VDCLPRR-RQSLLFSAT 574
+ LP RQS+LFSAT
Sbjct: 276 IKILPNEDRQSMLFSAT 292
>sp|A1CTZ2|DBP4_ASPCL ATP-dependent RNA helicase dbp4 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp4 PE=3 SV=1
Length = 823
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T+ LT++ + +T +Q +S L+G+D + AKTG+GK++AFL+P +E
Sbjct: 51 FSDLPLSEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLEN 110
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LIL PTRELA QI E + + + ++GG + +Q
Sbjct: 111 LYRRQWAEHDGLG----ALILSPTRELAIQIF-EVLRKIGRYHTFSAGLVIGGKSLREEQ 165
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + L+MLVLDEAD +LDLGF++ V+ IV
Sbjct: 166 ERLGR--MNILVCTPGRMLQHLDQTALFDT--YNLQMLVLDEADRILDLGFQQTVDAIVG 221
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKVSKYNI 607
LP+ RQ+LLFSAT K++ + R+ Y+ S TP K+ ++ +
Sbjct: 222 HLPKERQTLLFSATQTKKVSDLARLSLRDPEYVAVHETASTATPAKLQQHYV 273
>sp|Q7Y183|RH10_ORYSJ DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp.
japonica GN=Os03g0669000 PE=2 SV=1
Length = 472
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 140/270 (51%), Gaps = 28/270 (10%)
Query: 367 KEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTG 426
+E+ E P F E G+ P + A A G+ + TR+Q + LEG+D + +TG
Sbjct: 29 EEQEAEPPARRPSTFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTG 88
Query: 427 TGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIG 486
+GK+ AF LP I+A+LK ++ +L PTRELA QI + A L + G+
Sbjct: 89 SGKTGAFALPIIQALLKQDKPQA------LFACVLSPTRELAFQIGQQFEA-LGSAIGLS 141
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHL 546
LVGG +V Q + I+V TPGRLLDH+ + G S L LK LVLDEAD L
Sbjct: 142 CTVLVGGVD-RVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFS--LNKLKYLVLDEADKL 198
Query: 547 LDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKVSKYN 606
L++ F+K +++I++ +P+ R++ LFSATM + + + + PVKV +
Sbjct: 199 LNVEFQKALDDILNVIPKERRTFLFSATMTNK---------VSKLQRACLRNPVKVEVAS 249
Query: 607 IYVFVLVLSIKIQAFYII------CFVYTI 630
Y V L Q FY + CF+ +
Sbjct: 250 KYSTVDTLR---QEFYFVPADYKDCFLVHV 276
>sp|Q6BXG0|DBP4_DEBHA ATP-dependent RNA helicase DBP4 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP4 PE=3 SV=2
Length = 766
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 120/205 (58%), Gaps = 12/205 (5%)
Query: 373 EPILSQK---RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGK 429
+P++ +K +F + IS T + L A + +T +Q+ T+ L+G+D + AKTG+GK
Sbjct: 37 DPVVDEKSISQFSDLPISEETARGLKEASFASLTDIQKKTIPISLKGEDVMGTAKTGSGK 96
Query: 430 SIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT 489
++AFL+P IE++++ + L LI+ PTRELA QI E + + H+
Sbjct: 97 TLAFLIPTIESLIRNKITEYDGLA----ALIISPTRELAVQI-FEVLVKIGKHNNFSAGL 151
Query: 490 LVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDL 549
+ GG K ++ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+
Sbjct: 152 VTGGKDVKYEKERVSK--MNILVGTPGRISQHLNESVGMETS--NLQVLVLDEADRCLDM 207
Query: 550 GFRKDVENIVDCLPRRRQSLLFSAT 574
GF+K ++NI+ LP RQ+LLFSAT
Sbjct: 208 GFKKQIDNILGHLPPTRQTLLFSAT 232
>sp|A5E3K3|DBP4_LODEL ATP-dependent RNA helicase DBP4 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP4 PE=3 SV=1
Length = 775
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 118/198 (59%), Gaps = 9/198 (4%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S K F + I+ T++ L ++ +T +Q+ ++ L+G+D + A+TG+GK++AFL+P
Sbjct: 46 SIKHFSDLPITQNTLRGLKECSFVSLTDIQKKSIPVALKGEDLMGTARTGSGKTLAFLIP 105
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
IE +L+ + L LI+ PTRELA QI E +A + ++ + GG
Sbjct: 106 VIEILLRNDITEYDGLA----ALIVSPTRELAVQIF-EVLAKIGKYNSFSAGLVTGGKDV 160
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ ++ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+GFRK ++
Sbjct: 161 QYEKERISR--MNILVGTPGRISQHLNESVGMETS--NLQVLVLDEADRCLDMGFRKQID 216
Query: 557 NIVDCLPRRRQSLLFSAT 574
NI++ LPR RQ+LLFSAT
Sbjct: 217 NILNHLPRTRQTLLFSAT 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,021,703
Number of Sequences: 539616
Number of extensions: 10111947
Number of successful extensions: 54620
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 437
Number of HSP's that attempted gapping in prelim test: 47922
Number of HSP's gapped (non-prelim): 3314
length of query: 633
length of database: 191,569,459
effective HSP length: 124
effective length of query: 509
effective length of database: 124,657,075
effective search space: 63450451175
effective search space used: 63450451175
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)