Query 006737
Match_columns 633
No_of_seqs 450 out of 2781
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 07:37:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006737.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006737hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2j0sa1 c.37.1.19 (A:22-243) P 100.0 4E-40 2.9E-44 328.3 20.4 192 376-580 14-205 (222)
2 d1veca_ c.37.1.19 (A:) DEAD bo 100.0 1.7E-39 1.2E-43 319.8 21.5 190 379-580 3-192 (206)
3 d1t6na_ c.37.1.19 (A:) Spliceo 100.0 5E-39 3.7E-43 316.6 20.2 190 380-580 2-192 (207)
4 d2g9na1 c.37.1.19 (A:21-238) I 100.0 2.4E-38 1.8E-42 314.4 18.5 191 378-580 11-201 (218)
5 d1qdea_ c.37.1.19 (A:) Initiat 100.0 3.8E-37 2.7E-41 304.4 18.9 188 378-579 9-196 (212)
6 d1wrba1 c.37.1.19 (A:164-401) 100.0 5.9E-37 4.3E-41 308.2 17.9 198 377-579 19-221 (238)
7 d1hv8a1 c.37.1.19 (A:3-210) Pu 100.0 3.1E-36 2.3E-40 296.5 19.8 187 378-579 3-190 (208)
8 d1s2ma1 c.37.1.19 (A:46-251) P 100.0 7.6E-36 5.5E-40 292.9 19.4 188 380-580 2-189 (206)
9 d1q0ua_ c.37.1.19 (A:) Probabl 100.0 1.4E-34 1E-38 283.1 16.6 189 379-579 1-192 (209)
10 d2p6ra3 c.37.1.19 (A:1-202) He 99.9 1.2E-25 8.7E-30 218.3 10.8 173 386-578 10-185 (202)
11 d1gkub1 c.37.1.16 (B:1-250) He 99.9 5.7E-26 4.1E-30 225.9 7.4 179 380-579 23-218 (237)
12 d1oywa2 c.37.1.19 (A:1-206) Re 99.9 5E-25 3.6E-29 214.1 10.2 177 380-579 3-188 (206)
13 d1wp9a1 c.37.1.19 (A:1-200) pu 99.9 1.5E-21 1.1E-25 187.6 18.5 162 400-578 8-169 (200)
14 d2bmfa2 c.37.1.14 (A:178-482) 99.8 2E-20 1.4E-24 190.0 9.4 138 413-579 6-145 (305)
15 d1yksa1 c.37.1.14 (A:185-324) 99.7 4.9E-17 3.6E-21 145.0 8.7 136 413-576 4-140 (140)
16 d2eyqa3 c.37.1.19 (A:546-778) 99.6 3.2E-15 2.3E-19 148.2 18.8 170 385-579 39-217 (233)
17 d1rifa_ c.37.1.23 (A:) DNA hel 99.6 8.2E-16 6E-20 156.8 10.8 153 401-578 113-265 (282)
18 d1gm5a3 c.37.1.19 (A:286-549) 99.6 4.4E-15 3.2E-19 149.8 15.9 164 389-578 71-244 (264)
19 d2fz4a1 c.37.1.19 (A:24-229) D 99.6 1.6E-15 1.2E-19 147.2 12.0 136 401-575 70-205 (206)
20 d1a1va1 c.37.1.14 (A:190-325) 99.5 1.9E-14 1.4E-18 129.6 11.1 127 415-574 7-135 (136)
21 d1z3ix2 c.37.1.19 (X:92-389) R 98.8 9.8E-08 7.1E-12 96.2 17.9 163 401-578 55-233 (298)
22 d1z63a1 c.37.1.19 (A:432-661) 98.5 2E-07 1.4E-11 90.2 10.6 150 401-578 12-165 (230)
23 d1tf5a3 c.37.1.19 (A:1-226,A:3 98.4 1.2E-06 8.8E-11 86.8 12.8 130 401-547 80-213 (273)
24 d1nkta3 c.37.1.19 (A:-15-225,A 98.3 1.5E-06 1.1E-10 86.4 12.1 130 401-547 97-230 (288)
25 d1w36d1 c.37.1.19 (D:2-360) Ex 97.8 2.1E-05 1.6E-09 81.3 9.7 146 401-573 148-296 (359)
26 d1uaaa1 c.37.1.19 (A:2-307) DE 97.1 0.00048 3.5E-08 67.4 7.9 71 401-480 1-71 (306)
27 d1pjra1 c.37.1.19 (A:1-318) DE 96.4 0.0034 2.5E-07 61.7 8.3 72 401-481 11-82 (318)
28 d1l8qa2 c.37.1.20 (A:77-289) C 95.9 0.016 1.2E-06 54.4 10.1 45 533-578 96-142 (213)
29 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 95.6 0.012 8.7E-07 62.8 8.7 83 399-490 9-92 (623)
30 d1a5ta2 c.37.1.20 (A:1-207) de 95.5 0.013 9.6E-07 54.7 7.6 40 532-572 106-145 (207)
31 d1njfa_ c.37.1.20 (A:) delta p 94.8 0.25 1.8E-05 46.2 15.0 49 379-443 9-60 (239)
32 d2eyqa5 c.37.1.19 (A:779-989) 94.7 0.02 1.5E-06 54.0 6.4 92 457-564 33-127 (211)
33 d1ls1a2 c.37.1.10 (A:89-295) G 94.5 0.049 3.6E-06 51.1 8.7 46 533-578 91-137 (207)
34 d2gnoa2 c.37.1.20 (A:11-208) g 94.4 0.066 4.8E-06 49.5 9.2 43 532-575 77-119 (198)
35 d1sxje2 c.37.1.20 (E:4-255) Re 94.1 0.025 1.8E-06 53.2 5.6 39 533-572 130-168 (252)
36 d1sxjc2 c.37.1.20 (C:12-238) R 94.0 0.068 4.9E-06 49.5 8.6 39 532-571 97-135 (227)
37 d1sxjb2 c.37.1.20 (B:7-230) Re 93.9 0.13 9.5E-06 47.5 10.4 44 533-577 100-143 (224)
38 d1c4oa2 c.37.1.19 (A:410-583) 93.6 0.11 8.2E-06 47.2 9.0 77 457-547 33-112 (174)
39 d1ixza_ c.37.1.20 (A:) AAA dom 93.1 0.13 9.7E-06 49.0 9.2 52 378-432 5-58 (247)
40 d1t5la1 c.37.1.19 (A:2-414) Nu 93.0 0.053 3.8E-06 56.1 6.2 54 413-480 27-81 (413)
41 d1t5la2 c.37.1.19 (A:415-595) 92.9 0.071 5.2E-06 48.8 6.4 101 457-571 33-137 (181)
42 d1okkd2 c.37.1.10 (D:97-303) G 92.8 0.11 8.2E-06 48.5 7.8 18 416-433 6-23 (207)
43 d2qy9a2 c.37.1.10 (A:285-495) 92.4 0.21 1.5E-05 46.7 9.2 15 419-433 12-26 (211)
44 d1vmaa2 c.37.1.10 (A:82-294) G 92.4 0.23 1.7E-05 46.5 9.4 16 418-433 13-28 (213)
45 d1fuka_ c.37.1.19 (A:) Initiat 92.3 0.22 1.6E-05 44.2 8.9 73 457-543 29-104 (162)
46 d1iqpa2 c.37.1.20 (A:2-232) Re 92.3 0.49 3.6E-05 43.4 11.8 42 379-433 21-62 (231)
47 d1sxjd2 c.37.1.20 (D:26-262) R 91.8 0.081 5.9E-06 48.9 5.4 38 534-572 108-145 (237)
48 d1s2ma2 c.37.1.19 (A:252-422) 91.8 0.34 2.4E-05 43.2 9.5 73 457-543 34-109 (171)
49 d1lv7a_ c.37.1.20 (A:) AAA dom 91.7 0.13 9.6E-06 49.4 7.0 52 378-432 8-61 (256)
50 d1hv8a2 c.37.1.19 (A:211-365) 91.5 0.38 2.8E-05 42.0 9.4 70 457-540 30-102 (155)
51 d1oywa3 c.37.1.19 (A:207-406) 90.7 0.38 2.7E-05 44.3 8.8 70 457-540 32-104 (200)
52 d1d2na_ c.37.1.20 (A:) Hexamer 90.3 0.53 3.9E-05 44.5 9.8 16 417-432 41-56 (246)
53 d1g6oa_ c.37.1.11 (A:) Hexamer 90.2 0.19 1.4E-05 49.9 6.7 65 391-467 137-205 (323)
54 d1t5ia_ c.37.1.19 (A:) Spliceo 90.0 0.33 2.4E-05 43.2 7.6 73 457-543 29-104 (168)
55 d1tf7a2 c.37.1.11 (A:256-497) 90.0 0.23 1.7E-05 45.9 6.7 43 533-575 115-161 (242)
56 d2j0sa2 c.37.1.19 (A:244-411) 89.5 0.61 4.5E-05 41.5 9.0 71 457-541 36-109 (168)
57 d1ye8a1 c.37.1.11 (A:1-178) Hy 89.2 0.03 2.2E-06 49.5 -0.4 43 532-575 97-139 (178)
58 d2rb4a1 c.37.1.19 (A:307-474) 89.0 0.55 4E-05 41.7 8.3 70 457-540 34-106 (168)
59 d1j8yf2 c.37.1.10 (F:87-297) G 88.5 1 7.3E-05 41.8 10.0 15 419-433 15-29 (211)
60 d1jr6a_ c.37.1.14 (A:) HCV hel 86.8 0.3 2.2E-05 42.4 4.8 50 457-515 37-86 (138)
61 d1yksa2 c.37.1.14 (A:325-623) 84.6 0.41 3E-05 47.0 5.1 53 457-515 38-90 (299)
62 d1e32a2 c.37.1.20 (A:201-458) 83.2 1.2 8.8E-05 42.0 7.8 16 417-432 39-54 (258)
63 d1e9ra_ c.37.1.11 (A:) Bacteri 82.8 0.46 3.4E-05 47.9 4.7 28 415-443 49-76 (433)
64 d2i3ba1 c.37.1.11 (A:1-189) Ca 82.6 0.63 4.6E-05 39.9 5.0 26 417-443 2-27 (189)
65 d1c4oa1 c.37.1.19 (A:2-409) Nu 82.4 0.78 5.7E-05 46.8 6.3 55 412-480 23-78 (408)
66 d1wp9a2 c.37.1.19 (A:201-486) 81.2 3.2 0.00023 39.2 10.1 70 457-540 163-243 (286)
67 d2fnaa2 c.37.1.20 (A:1-283) Ar 81.1 2.7 0.0002 38.2 9.3 30 534-563 136-168 (283)
68 d1r6bx2 c.37.1.20 (X:169-436) 80.9 2.1 0.00015 41.0 8.6 40 537-578 113-158 (268)
69 d1p9ra_ c.37.1.11 (A:) Extrace 79.8 0.8 5.8E-05 46.5 5.3 37 404-441 144-182 (401)
70 d1ofha_ c.37.1.20 (A:) HslU {H 78.2 0.46 3.4E-05 46.4 2.7 18 416-433 49-66 (309)
71 d1g41a_ c.37.1.20 (A:) HslU {H 78.1 0.35 2.5E-05 50.1 1.8 17 416-432 49-65 (443)
72 d1qvra2 c.37.1.20 (A:149-535) 77.4 1.9 0.00014 43.4 7.3 16 417-432 44-59 (387)
73 d1ixsb2 c.37.1.20 (B:4-242) Ho 76.7 1.3 9.4E-05 40.6 5.3 43 379-433 6-52 (239)
74 d2p6ra4 c.37.1.19 (A:203-403) 75.9 4.1 0.0003 36.8 8.6 74 458-540 43-144 (201)
75 d1w36b1 c.37.1.19 (B:1-485) Ex 75.9 1.9 0.00014 43.0 6.9 63 417-479 17-80 (485)
76 d1tf7a1 c.37.1.11 (A:14-255) C 75.9 3.3 0.00024 36.8 7.9 18 415-432 25-42 (242)
77 d1in4a2 c.37.1.20 (A:17-254) H 75.7 1.8 0.00013 39.4 6.1 44 379-433 6-52 (238)
78 d2b8ta1 c.37.1.24 (A:11-149) T 74.1 5.6 0.00041 33.9 8.6 101 419-562 5-105 (139)
79 d1um8a_ c.37.1.20 (A:) ClpX {H 73.8 1.1 7.9E-05 44.9 4.2 17 417-433 69-85 (364)
80 d1jbka_ c.37.1.20 (A:) ClpB, A 73.0 19 0.0013 32.4 12.3 37 505-544 149-186 (195)
81 d1kaga_ c.37.1.2 (A:) Shikimat 71.3 0.9 6.6E-05 38.0 2.5 19 416-434 2-20 (169)
82 d1fnna2 c.37.1.20 (A:1-276) CD 70.8 0.91 6.6E-05 41.6 2.6 16 417-432 44-59 (276)
83 d1sxja2 c.37.1.20 (A:295-547) 69.5 2.3 0.00017 38.9 5.1 54 379-433 11-69 (253)
84 d1xx6a1 c.37.1.24 (A:2-142) Th 67.9 7.3 0.00053 33.3 7.9 40 416-466 7-46 (141)
85 d1gm5a4 c.37.1.19 (A:550-755) 67.5 0.3 2.2E-05 45.4 -1.7 95 457-564 31-134 (206)
86 d1g5ta_ c.37.1.11 (A:) ATP:cor 66.5 4.6 0.00034 35.4 6.3 52 533-584 93-146 (157)
87 d1zp6a1 c.37.1.25 (A:6-181) Hy 66.0 0.9 6.5E-05 39.0 1.3 19 414-432 2-20 (176)
88 d1nlfa_ c.37.1.11 (A:) Hexamer 65.1 2.7 0.0002 38.9 4.8 68 411-480 24-91 (274)
89 d1ly1a_ c.37.1.1 (A:) Polynucl 64.4 1.1 8.1E-05 37.6 1.6 15 418-432 4-18 (152)
90 d1lw7a2 c.37.1.1 (A:220-411) T 62.0 0.96 7E-05 38.7 0.7 16 417-432 8-23 (192)
91 d1gvnb_ c.37.1.21 (B:) Plasmid 61.6 1.4 0.0001 40.6 1.8 15 418-432 34-48 (273)
92 d2bdta1 c.37.1.25 (A:1-176) Hy 61.1 1.4 0.0001 37.2 1.6 15 418-432 4-18 (176)
93 d1rkba_ c.37.1.1 (A:) Adenylat 60.5 1.7 0.00012 36.9 2.0 17 417-433 5-21 (173)
94 d1y63a_ c.37.1.1 (A:) Probable 60.2 1.6 0.00012 37.2 1.8 17 416-432 5-21 (174)
95 d1nyta1 c.2.1.7 (A:102-271) Sh 56.9 2.2 0.00016 37.4 2.2 47 414-476 16-62 (170)
96 d1xbta1 c.37.1.24 (A:18-150) T 56.9 6.7 0.00049 33.1 5.4 37 419-466 5-41 (133)
97 d1bg2a_ c.37.1.9 (A:) Kinesin 56.5 2.9 0.00021 40.7 3.2 24 409-432 67-92 (323)
98 d1gkub2 c.37.1.16 (B:251-498) 55.5 2.1 0.00015 39.8 1.9 72 457-544 27-102 (248)
99 d1cr2a_ c.37.1.11 (A:) Gene 4 55.4 4.4 0.00032 37.6 4.3 19 414-432 33-51 (277)
100 d1viaa_ c.37.1.2 (A:) Shikimat 55.0 2.1 0.00016 36.9 1.8 17 417-433 1-17 (161)
101 d1a1va2 c.37.1.14 (A:326-624) 55.0 6.4 0.00046 38.1 5.4 36 457-497 38-73 (299)
102 d1n0wa_ c.37.1.11 (A:) DNA rep 54.8 2.7 0.00019 36.3 2.4 18 415-432 22-39 (242)
103 d1mo6a1 c.37.1.11 (A:1-269) Re 54.7 11 0.00079 35.7 7.1 93 415-547 59-151 (269)
104 d1m8pa3 c.37.1.15 (A:391-573) 53.3 1.7 0.00012 37.0 0.7 20 414-433 4-23 (183)
105 d1qhxa_ c.37.1.3 (A:) Chloramp 53.1 2.4 0.00018 35.8 1.8 18 415-432 2-19 (178)
106 d2a5yb3 c.37.1.20 (B:109-385) 53.1 24 0.0018 32.7 9.5 30 486-515 136-165 (277)
107 d1w5sa2 c.37.1.20 (A:7-293) CD 52.5 1.5 0.00011 40.3 0.3 15 419-433 49-63 (287)
108 d1ny5a1 c.23.1.1 (A:1-137) Tra 51.6 54 0.004 26.7 10.6 42 534-578 44-85 (137)
109 d1khta_ c.37.1.1 (A:) Adenylat 50.6 4.7 0.00034 34.1 3.3 16 417-432 2-17 (190)
110 d1kgda_ c.37.1.1 (A:) Guanylat 50.3 3.1 0.00023 36.8 2.1 16 417-432 4-19 (178)
111 d1v8ka_ c.37.1.9 (A:) Kinesin 50.1 4.1 0.0003 40.4 3.2 24 409-432 105-130 (362)
112 d1goja_ c.37.1.9 (A:) Kinesin 49.8 4.2 0.00031 40.0 3.2 24 409-432 71-96 (354)
113 d1ys7a2 c.23.1.1 (A:7-127) Tra 49.5 59 0.0043 25.9 11.0 85 456-578 2-86 (121)
114 d1g8pa_ c.37.1.20 (A:) ATPase 49.3 2.8 0.0002 40.5 1.7 18 415-432 27-44 (333)
115 d1knqa_ c.37.1.17 (A:) Glucona 48.8 2.9 0.00021 35.4 1.6 17 417-433 7-23 (171)
116 d2zfia1 c.37.1.9 (A:4-352) Kin 47.9 4.7 0.00034 39.5 3.2 24 409-432 78-103 (349)
117 d1sdma_ c.37.1.9 (A:) Kinesin 47.8 4 0.00029 40.4 2.7 24 409-432 66-91 (364)
118 d1xp8a1 c.37.1.11 (A:15-282) R 47.2 15 0.0011 34.5 6.8 20 415-434 56-75 (268)
119 d1vi2a1 c.2.1.7 (A:107-288) Pu 46.6 12 0.00088 32.6 5.6 22 414-435 16-37 (182)
120 d1np6a_ c.37.1.10 (A:) Molybdo 46.6 7.7 0.00056 32.3 4.1 13 419-431 5-17 (170)
121 d1szpa2 c.37.1.11 (A:145-395) 45.7 3.3 0.00024 37.0 1.5 17 415-431 33-49 (251)
122 d2bmfa2 c.37.1.14 (A:178-482) 45.5 11 0.0008 34.8 5.4 53 457-515 180-232 (305)
123 d1qkka_ c.23.1.1 (A:) Transcri 45.4 55 0.004 26.8 9.6 43 534-579 44-86 (140)
124 d1yj5a2 c.37.1.1 (A:351-522) 5 44.7 3.7 0.00027 36.0 1.6 14 418-431 16-29 (172)
125 d1gkya_ c.37.1.1 (A:) Guanylat 44.6 3.6 0.00026 36.2 1.6 15 417-431 2-16 (186)
126 d1znwa1 c.37.1.1 (A:20-201) Gu 43.0 4.2 0.00031 35.4 1.8 17 416-432 2-18 (182)
127 d1pzna2 c.37.1.11 (A:96-349) D 42.9 4.5 0.00032 36.5 1.9 18 415-432 35-52 (254)
128 d1f9va_ c.37.1.9 (A:) Kinesin 42.8 5 0.00036 39.2 2.4 26 408-433 73-100 (342)
129 d1svma_ c.37.1.20 (A:) Papillo 42.8 7.3 0.00053 38.5 3.7 35 398-432 132-170 (362)
130 d1s96a_ c.37.1.1 (A:) Guanylat 42.2 4.5 0.00033 36.6 1.9 17 416-432 2-18 (205)
131 d1nksa_ c.37.1.1 (A:) Adenylat 41.9 7.3 0.00053 33.0 3.2 23 419-443 4-26 (194)
132 d1rz3a_ c.37.1.6 (A:) Hypothet 41.8 7.8 0.00057 33.1 3.4 17 416-432 21-38 (198)
133 d1zaka1 c.37.1.1 (A:3-127,A:15 40.6 5 0.00036 35.0 1.8 16 418-433 5-20 (189)
134 d1r6bx3 c.37.1.20 (X:437-751) 40.2 6.8 0.0005 37.8 3.0 16 418-433 54-69 (315)
135 d2ncda_ c.37.1.9 (A:) Kinesin 40.0 6.3 0.00046 38.9 2.7 25 408-432 115-141 (368)
136 d1x88a1 c.37.1.9 (A:18-362) Ki 39.9 6.9 0.0005 38.1 3.0 25 408-432 71-97 (345)
137 d1e6ca_ c.37.1.2 (A:) Shikimat 39.8 6.6 0.00048 33.7 2.5 18 417-434 3-20 (170)
138 d1lvga_ c.37.1.1 (A:) Guanylat 39.4 4.9 0.00036 35.5 1.6 15 418-432 2-16 (190)
139 d1zina1 c.37.1.1 (A:1-125,A:16 37.8 6.7 0.00049 33.5 2.2 16 418-433 2-17 (182)
140 d1x6va3 c.37.1.4 (A:34-228) Ad 37.4 2.8 0.00021 36.3 -0.5 19 416-434 19-37 (195)
141 d1r7ra3 c.37.1.20 (A:471-735) 36.8 5.2 0.00038 37.6 1.4 17 416-432 41-57 (265)
142 d1l2ta_ c.37.1.12 (A:) MJ0796 36.8 6.8 0.0005 36.3 2.2 43 532-574 161-205 (230)
143 d1v5wa_ c.37.1.11 (A:) Meiotic 36.8 6.8 0.0005 35.0 2.2 18 415-432 36-53 (258)
144 d1qf9a_ c.37.1.1 (A:) UMP/CMP 36.6 7 0.00051 34.0 2.2 15 418-432 8-22 (194)
145 d1xhfa1 c.23.1.1 (A:2-122) Aer 36.6 94 0.0068 24.5 10.1 84 456-578 3-86 (121)
146 d2i1qa2 c.37.1.11 (A:65-322) D 36.2 6.6 0.00048 34.7 1.9 20 414-433 32-51 (258)
147 d1s3ga1 c.37.1.1 (A:1-125,A:16 36.1 7.6 0.00055 33.5 2.3 16 418-433 2-17 (182)
148 d1ukza_ c.37.1.1 (A:) Uridylat 36.0 6.7 0.00049 34.3 1.9 16 418-433 10-25 (196)
149 d1nija1 c.37.1.10 (A:2-223) Hy 35.8 1.4E+02 0.01 26.2 11.5 37 533-572 149-185 (222)
150 d2cdna1 c.37.1.1 (A:1-181) Ade 35.8 5.8 0.00042 34.2 1.4 16 418-433 2-17 (181)
151 d2pmka1 c.37.1.12 (A:467-707) 35.5 6.3 0.00046 36.8 1.7 23 413-435 26-48 (241)
152 d1ak2a1 c.37.1.1 (A:14-146,A:1 34.9 8.6 0.00062 33.3 2.5 18 416-433 3-20 (190)
153 d1z5za1 c.37.1.19 (A:663-906) 34.8 81 0.0059 28.0 9.7 97 425-544 66-166 (244)
154 d1jj7a_ c.37.1.12 (A:) Peptide 34.6 6.8 0.00049 36.7 1.8 41 532-572 167-208 (251)
155 d1e4va1 c.37.1.1 (A:1-121,A:15 34.2 7.3 0.00053 33.5 1.8 16 418-433 2-17 (179)
156 d2fh5b1 c.37.1.8 (B:63-269) Si 33.7 23 0.0017 30.8 5.3 23 417-444 1-23 (207)
157 d3adka_ c.37.1.1 (A:) Adenylat 33.5 9.8 0.00071 33.2 2.6 20 413-432 5-24 (194)
158 d1ny5a2 c.37.1.20 (A:138-384) 33.4 10 0.00075 35.1 2.9 21 412-432 19-39 (247)
159 d1bifa1 c.37.1.7 (A:37-249) 6- 33.2 7.1 0.00052 33.9 1.6 15 419-433 5-19 (213)
160 d1qhla_ c.37.1.12 (A:) Cell di 31.8 3.1 0.00023 35.4 -1.1 23 419-443 27-49 (222)
161 g1xew.1 c.37.1.12 (X:,Y:) Smc 31.6 9.7 0.00071 35.8 2.4 45 533-579 245-289 (329)
162 d3b60a1 c.37.1.12 (A:329-581) 31.3 8 0.00058 36.2 1.7 41 532-572 168-208 (253)
163 d1teva_ c.37.1.1 (A:) UMP/CMP 31.3 10 0.00073 32.9 2.3 15 419-433 4-18 (194)
164 d3dhwc1 c.37.1.12 (C:1-240) Me 31.1 9.3 0.00068 35.6 2.1 42 532-573 156-198 (240)
165 d1yxma1 c.2.1.2 (A:7-303) Pero 31.0 50 0.0037 30.8 7.7 90 412-517 8-104 (297)
166 d1r0wa_ c.37.1.12 (A:) Cystic 31.0 9.2 0.00067 36.4 2.1 42 532-574 174-216 (281)
167 d1sgwa_ c.37.1.12 (A:) Putativ 30.9 8.9 0.00065 34.4 1.9 43 532-574 141-183 (200)
168 d2iyva1 c.37.1.2 (A:2-166) Shi 30.9 11 0.00079 32.0 2.4 17 418-434 3-19 (165)
169 d1xjca_ c.37.1.10 (A:) Molybdo 30.5 23 0.0017 29.7 4.6 13 419-431 4-16 (165)
170 d2ak3a1 c.37.1.1 (A:0-124,A:16 30.4 11 0.00077 33.2 2.3 16 418-433 8-23 (189)
171 d1mv5a_ c.37.1.12 (A:) Multidr 30.4 7.8 0.00057 36.1 1.4 42 532-574 155-196 (242)
172 d1uj2a_ c.37.1.6 (A:) Uridine- 30.0 8.5 0.00062 34.0 1.6 18 532-549 108-125 (213)
173 d1akya1 c.37.1.1 (A:3-130,A:16 29.7 11 0.00081 32.4 2.3 16 418-433 4-19 (180)
174 d2hyda1 c.37.1.12 (A:324-578) 29.7 8.3 0.0006 36.2 1.5 21 413-433 41-61 (255)
175 d2awna2 c.37.1.12 (A:4-235) Ma 29.6 11 0.00081 34.9 2.4 47 532-578 146-193 (232)
176 d1u94a1 c.37.1.11 (A:6-268) Re 29.5 19 0.0014 33.7 4.1 21 415-435 53-73 (263)
177 d1yioa2 c.23.1.1 (A:3-130) Res 29.5 1.3E+02 0.0091 23.8 10.0 42 534-578 46-87 (128)
178 d1yrba1 c.37.1.10 (A:1-244) AT 29.3 21 0.0016 31.4 4.3 13 419-431 3-15 (244)
179 d1z3ix1 c.37.1.19 (X:390-735) 29.2 1.5E+02 0.011 28.2 11.0 95 425-542 98-197 (346)
180 d1yb1a_ c.2.1.2 (A:) 17-beta-h 28.9 69 0.0051 28.9 8.1 83 414-517 5-94 (244)
181 d1qvra3 c.37.1.20 (A:536-850) 28.2 8.5 0.00062 37.1 1.3 16 418-433 55-70 (315)
182 g1f2t.1 c.37.1.12 (A:,B:) Rad5 27.4 20 0.0015 32.3 3.8 40 533-572 224-264 (292)
183 d1ry6a_ c.37.1.9 (A:) Kinesin 27.3 10 0.00076 36.5 1.8 18 415-432 82-101 (330)
184 d1a7ja_ c.37.1.6 (A:) Phosphor 27.0 19 0.0014 34.3 3.6 23 419-443 7-29 (288)
185 d1byia_ c.37.1.10 (A:) Dethiob 26.5 22 0.0016 30.6 3.8 18 417-434 2-20 (224)
186 d1w44a_ c.37.1.11 (A:) NTPase 26.1 10 0.00076 36.8 1.5 42 536-577 184-236 (321)
187 d1g2912 c.37.1.12 (1:1-240) Ma 26.0 14 0.001 34.4 2.3 46 532-577 155-202 (240)
188 d1w1wa_ c.37.1.12 (A:) Smc hea 25.3 15 0.0011 35.4 2.5 14 419-432 28-41 (427)
189 d1u0sy_ c.23.1.1 (Y:) CheY pro 25.2 1.4E+02 0.011 23.1 9.7 43 534-579 46-88 (118)
190 d1kgsa2 c.23.1.1 (A:2-123) Pho 25.2 1.5E+02 0.011 23.2 11.0 43 534-579 45-87 (122)
191 g1ii8.1 c.37.1.12 (A:,B:) Rad5 24.9 18 0.0013 33.0 3.0 22 419-442 26-47 (369)
192 d1v43a3 c.37.1.12 (A:7-245) Hy 24.9 15 0.0011 34.0 2.4 45 532-576 152-198 (239)
193 g1f2t.1 c.37.1.12 (A:,B:) Rad5 24.7 19 0.0014 32.5 3.0 14 419-432 26-39 (292)
194 d1krwa_ c.23.1.1 (A:) NTRC rec 24.6 1.5E+02 0.011 23.2 10.0 43 534-579 47-89 (123)
195 d1q9ca_ a.22.1.3 (A:) Histone 24.4 10 0.00074 33.6 0.9 26 32-57 71-96 (172)
196 d1tuea_ c.37.1.20 (A:) Replica 24.1 29 0.0021 31.4 4.1 43 388-432 23-69 (205)
197 d1w1wa_ c.37.1.12 (A:) Smc hea 23.6 19 0.0014 34.6 2.9 40 533-572 353-393 (427)
198 d1x1ta1 c.2.1.2 (A:1-260) D(-) 23.5 85 0.0062 28.2 7.6 85 413-517 1-93 (260)
199 d1t5la1 c.37.1.19 (A:2-414) Nu 23.5 11 0.00081 37.9 1.1 43 536-578 332-398 (413)
200 d1u0la2 c.37.1.8 (A:69-293) Pr 22.6 28 0.002 31.9 3.7 29 403-431 82-110 (225)
201 d1ckea_ c.37.1.1 (A:) CMP kina 22.6 18 0.0013 31.4 2.3 16 419-434 6-21 (225)
202 d1fmca_ c.2.1.2 (A:) 7-alpha-h 22.5 72 0.0052 28.8 6.9 84 414-517 9-98 (255)
203 d1sq5a_ c.37.1.6 (A:) Pantothe 22.4 30 0.0022 33.1 4.1 23 419-443 83-105 (308)
204 d1r8sa_ c.37.1.8 (A:) ADP-ribo 22.2 48 0.0035 26.5 5.0 13 419-431 3-15 (160)
205 d1e69a_ c.37.1.12 (A:) Smc hea 22.0 27 0.002 32.0 3.7 45 533-579 240-284 (308)
206 d3d31a2 c.37.1.12 (A:1-229) Su 21.6 13 0.00094 34.3 1.1 48 532-579 143-191 (229)
207 d1knxa2 c.91.1.2 (A:133-309) H 21.5 18 0.0013 31.9 2.1 19 415-433 14-32 (177)
208 d2onka1 c.37.1.12 (A:1-240) Mo 21.2 21 0.0015 33.1 2.5 47 532-578 142-190 (240)
209 d1oxxk2 c.37.1.12 (K:1-242) Gl 20.6 11 0.00081 35.1 0.4 44 532-575 156-200 (242)
210 d1ji0a_ c.37.1.12 (A:) Branche 20.6 17 0.0012 33.5 1.7 44 532-575 155-198 (240)
211 d2vp4a1 c.37.1.1 (A:12-208) De 20.6 16 0.0012 31.4 1.6 13 419-431 12-24 (197)
212 d1e69a_ c.37.1.12 (A:) Smc hea 20.5 19 0.0014 33.2 2.1 14 419-432 27-40 (308)
213 d1ae1a_ c.2.1.2 (A:) Tropinone 20.3 1.2E+02 0.0091 27.1 8.1 83 414-517 4-94 (258)
214 d1kkma_ c.91.1.2 (A:) HPr kina 20.1 20 0.0014 31.6 2.0 19 415-433 13-31 (176)
No 1
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=4e-40 Score=328.32 Aligned_cols=192 Identities=32% Similarity=0.552 Sum_probs=174.4
Q ss_pred ccccCccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC
Q 006737 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP 455 (633)
Q Consensus 376 ~~~~~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~ 455 (633)
....+|++|+|++.++++|.++||.+||++|..+||.+++|+|++++|+||||||+||++|+++++.... ..
T Consensus 14 ~~~~sF~~l~L~~~l~~~L~~~g~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTlayllPil~~l~~~~--------~~ 85 (222)
T d2j0sa1 14 DVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQV--------RE 85 (222)
T ss_dssp CCCCSGGGGCCCHHHHHHHHHHTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHTCCTTS--------CS
T ss_pred CCCCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCeEEEcCcchhhhhhhcccccccccccc--------cC
Confidence 3445799999999999999999999999999999999999999999999999999999999998875432 24
Q ss_pred eEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCe
Q 006737 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGL 535 (633)
Q Consensus 456 ~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l 535 (633)
+++||++||||||.|+++.+..+.... ++++.+++|+.....+...+..+ ++|||+|||+|.+++... ...++++
T Consensus 86 ~~~lil~PtreLa~Qi~~~~~~l~~~~-~i~~~~~~g~~~~~~~~~~l~~~-~~Ilv~TPgrl~~~~~~~---~~~~~~l 160 (222)
T d2j0sa1 86 TQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYG-QHVVAGTPGRVFDMIRRR---SLRTRAI 160 (222)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHTTTT-TCCEEEECTTSCHHHHHHHHHHC-CSEEEECHHHHHHHHHTT---SSCCTTC
T ss_pred ceeEEecchHHHHHHHHHHHHHHhCcc-ceeEEEEeecccchhhHHHhccC-CeEEeCCCCcHHhccccc---ccccccc
Confidence 679999999999999999999998754 79999999999888777777654 799999999999998776 4678999
Q ss_pred eEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhhh
Q 006737 536 KMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELV 580 (633)
Q Consensus 536 ~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el~ 580 (633)
++|||||||+|++.+|...+..|+..+++++|+++||||+++++.
T Consensus 161 ~~lVlDEaD~ll~~~f~~~i~~I~~~l~~~~Q~ilfSAT~~~~v~ 205 (222)
T d2j0sa1 161 KMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEIL 205 (222)
T ss_dssp CEEEEETHHHHTSTTTHHHHHHHHTTSCTTCEEEEEESCCCHHHH
T ss_pred eeeeecchhHhhhcCcHHHHHHHHHhCCCCCEEEEEEEeCCHHHH
Confidence 999999999999999999999999999999999999999999863
No 2
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.7e-39 Score=319.77 Aligned_cols=190 Identities=35% Similarity=0.582 Sum_probs=172.1
Q ss_pred cCccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEE
Q 006737 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYV 458 (633)
Q Consensus 379 ~~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~v 458 (633)
++|++|+|++.++++|.++||+.||++|+++||.+++|+|++++||||||||+||++|+++++.... .++++
T Consensus 3 ~~F~~l~L~~~l~~~l~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllP~l~~~~~~~--------~~~~~ 74 (206)
T d1veca_ 3 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK--------DNIQA 74 (206)
T ss_dssp SSGGGSCCCHHHHHHHHTTTCCSCCHHHHHHHHHHHTTCCEEEECCSSSTTHHHHHHHHHHHCCTTS--------CSCCE
T ss_pred CChhccCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEeeccCccccccccccchhhcccccc--------cCcce
Confidence 5799999999999999999999999999999999999999999999999999999999998864332 34679
Q ss_pred EEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEE
Q 006737 459 LILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKML 538 (633)
Q Consensus 459 LILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~L 538 (633)
||++||++||.|+++.+..+.....++.+....|+.....+...+.. +++|||+||++|.+++... ...++++++|
T Consensus 75 lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~ivv~TPgrl~~~~~~~---~~~~~~l~~l 150 (206)
T d1veca_ 75 MVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDD-TVHVVIATPGRILDLIKKG---VAKVDHVQMI 150 (206)
T ss_dssp EEECSCHHHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHHHTTS-CCSEEEECHHHHHHHHHTT---CSCCTTCCEE
T ss_pred EEEeecchhhHHHHHHHHHHhhcccCcccccccCCccHHHHHHHHHh-ccCeEEeCCccccccccch---hccccccceE
Confidence 99999999999999999999887777888888888887766555544 5899999999999999876 4678999999
Q ss_pred EEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhhh
Q 006737 539 VLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELV 580 (633)
Q Consensus 539 VIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el~ 580 (633)
||||||.|++.+|..++..|+..+++++|+++||||+++++.
T Consensus 151 VlDEaD~ll~~~f~~~i~~I~~~~~~~~Q~~l~SAT~~~~v~ 192 (206)
T d1veca_ 151 VLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQ 192 (206)
T ss_dssp EEETHHHHTSTTTHHHHHHHHHHSCTTCEEEEEESCCCHHHH
T ss_pred EEeccccccccchHHHHHHHHHhCCCCCEEEEEEecCCHHHH
Confidence 999999999999999999999999999999999999999863
No 3
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=5e-39 Score=316.59 Aligned_cols=190 Identities=33% Similarity=0.559 Sum_probs=173.7
Q ss_pred CccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEE
Q 006737 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVL 459 (633)
Q Consensus 380 ~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vL 459 (633)
.|++|+|++.++++|.++||++|||+|+++||.+++|+|++++||||||||+||++|+++.+... ..++++|
T Consensus 2 ~F~dl~L~~~l~~~l~~~g~~~pt~iQ~~aip~il~g~dvl~~A~TGsGKTla~~lp~l~~~~~~--------~~~~~~l 73 (207)
T d1t6na_ 2 GFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPV--------TGQVSVL 73 (207)
T ss_dssp CSTTSCCCHHHHHHHHHTTCCCCCHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHCCCC--------TTCCCEE
T ss_pred CccccCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCeEEEeccccccccccccceeeeeccc--------CCCceEE
Confidence 59999999999999999999999999999999999999999999999999999999999875332 2346799
Q ss_pred EEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEEE
Q 006737 460 ILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLV 539 (633)
Q Consensus 460 ILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LV 539 (633)
|++|||+||.|+++.+..+......+.+.+++|+.....+...+....++|||+||++|.+++.+. ...++++++||
T Consensus 74 il~PtreL~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ilI~TP~rl~~~~~~~---~~~l~~l~~lV 150 (207)
T d1t6na_ 74 VMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNK---SLNLKHIKHFI 150 (207)
T ss_dssp EECSCHHHHHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHHHHHHHSCCSEEEECHHHHHHHHHTT---SSCCTTCCEEE
T ss_pred EEeccchhhHHHHHHHHHHHhhCCCceeEEEeccccHHHHHHHHHhcCCCEEEeCcchhhhhccCC---ceeccccceee
Confidence 999999999999999999998877788899999998888888887777999999999999999876 46799999999
Q ss_pred EecccccCC-cChHHHHHHHHHHCCCCCcEEEEeccCChhhh
Q 006737 540 LDEADHLLD-LGFRKDVENIVDCLPRRRQSLLFSATMPKELV 580 (633)
Q Consensus 540 IDEAD~Lld-~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el~ 580 (633)
|||||.|++ .+|...+..|+..+++++|+++||||+++.+.
T Consensus 151 lDEaD~ll~~~~~~~~i~~I~~~~~~~~Q~il~SAT~~~~v~ 192 (207)
T d1t6na_ 151 LDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 192 (207)
T ss_dssp EESHHHHHSSHHHHHHHHHHHHTSCSSSEEEEEESCCCTTTH
T ss_pred hhhhhhhhhcCCcHHHHHHHHHhCCCCCEEEEEeeeCCHHHH
Confidence 999999997 48999999999999999999999999998853
No 4
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.4e-38 Score=314.41 Aligned_cols=191 Identities=31% Similarity=0.556 Sum_probs=170.4
Q ss_pred ccCccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeE
Q 006737 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457 (633)
Q Consensus 378 ~~~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~ 457 (633)
..+|++++|++.++++|.++||.+||++|+++||.++.|+|++++|+||||||+||++|+++++.... .+++
T Consensus 11 i~sF~~l~L~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllp~l~~i~~~~--------~~~~ 82 (218)
T d2g9na1 11 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDL--------KATQ 82 (218)
T ss_dssp CCCGGGSCCCHHHHHHHHHHTCCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHHHHHHHHHCCTTC--------CSCC
T ss_pred cCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEEEcccchhhhhhhhhhhhheecccc--------cCcc
Confidence 46799999999999999999999999999999999999999999999999999999999999874332 3468
Q ss_pred EEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeE
Q 006737 458 VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKM 537 (633)
Q Consensus 458 vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~ 537 (633)
+||++||++||.|+++.+..+.... ++.+.++.++.....+........++|||+||++|.+++.+. ...++++++
T Consensus 83 alil~Pt~eL~~Q~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~IvV~TP~rl~~~l~~~---~~~~~~l~~ 158 (218)
T d2g9na1 83 ALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRR---YLSPKYIKM 158 (218)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTT-TCCEEEECC--CCCSTTTSSSSCCCSEEEECHHHHHHHHHTT---SSCSTTCCE
T ss_pred EEEEcccchhhhhHHHHHhhhcccc-ceeEEeeecccchhHHHHHHhcCCCEEEEeCChhHHHHHhcC---CcccccceE
Confidence 9999999999999999999998766 677777777776666555565667899999999999999876 467899999
Q ss_pred EEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhhh
Q 006737 538 LVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELV 580 (633)
Q Consensus 538 LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el~ 580 (633)
|||||||.|++.+|...+..|++.+++++|+++||||+++++.
T Consensus 159 lVlDEaD~ll~~~f~~~~~~Il~~~~~~~Q~il~SAT~~~~v~ 201 (218)
T d2g9na1 159 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL 201 (218)
T ss_dssp EEEESHHHHHHTTCHHHHHHHHHHSCTTCEEEEEESCCCHHHH
T ss_pred EEeeecchhhcCchHHHHHHHHHhCCCCCeEEEEEecCCHHHH
Confidence 9999999999999999999999999999999999999999863
No 5
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.8e-37 Score=304.41 Aligned_cols=188 Identities=34% Similarity=0.567 Sum_probs=162.3
Q ss_pred ccCccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeE
Q 006737 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457 (633)
Q Consensus 378 ~~~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~ 457 (633)
..+|++|+|++.++++|.++||++||++|..+||+++.|+|++++||||||||+||++|+++++.... .+++
T Consensus 9 ~~sF~~l~l~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a~~lp~i~~l~~~~--------~~~~ 80 (212)
T d1qdea_ 9 VYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSV--------KAPQ 80 (212)
T ss_dssp CCCGGGGTCCHHHHHHHHHHTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHCCTTC--------CSCC
T ss_pred ccChhhCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEeecccccchhhhhHhhhHhhhhccC--------CCcc
Confidence 56799999999999999999999999999999999999999999999999999999999999874332 3578
Q ss_pred EEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeE
Q 006737 458 VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKM 537 (633)
Q Consensus 458 vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~ 537 (633)
+||++||++|+.|++..+..+.... .+.+..+.++.....+...++ +++|+|+||++|..++... ...++++++
T Consensus 81 ~lil~pt~el~~q~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~IvI~TP~~l~~~~~~~---~~~l~~l~~ 154 (212)
T d1qdea_ 81 ALMLAPTRELALQIQKVVMALAFHM-DIKVHACIGGTSFVEDAEGLR--DAQIVVGTPGRVFDNIQRR---RFRTDKIKM 154 (212)
T ss_dssp EEEECSSHHHHHHHHHHHHHHTTTS-CCCEEEECC----------CT--TCSEEEECHHHHHHHHHTT---SSCCTTCCE
T ss_pred eEEEcccHHHhhhhhhhhccccccc-ccceeeEeeccchhHHHHHhc--CCcEEEECCCccccccccC---ceecCcceE
Confidence 9999999999999999998887654 678888888777665555443 4799999999999999776 467999999
Q ss_pred EEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhh
Q 006737 538 LVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL 579 (633)
Q Consensus 538 LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el 579 (633)
+||||||.|++.+|...+..|++.+++.+|+++||||+++.+
T Consensus 155 lVlDEad~lld~~f~~~v~~I~~~~~~~~Q~vl~SAT~~~~v 196 (212)
T d1qdea_ 155 FILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDV 196 (212)
T ss_dssp EEEETHHHHHHTTCHHHHHHHHHHSCTTCEEEEEESSCCHHH
T ss_pred EeehhhhhhcccchHHHHHHHHHhCCCCCeEEEEEeeCCHHH
Confidence 999999999999999999999999999999999999999985
No 6
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=100.00 E-value=5.9e-37 Score=308.16 Aligned_cols=198 Identities=37% Similarity=0.552 Sum_probs=172.8
Q ss_pred cccCccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCC-CCCCCCC
Q 006737 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSS-TTQLVPP 455 (633)
Q Consensus 377 ~~~~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~-~~~~~~~ 455 (633)
...+|++|+|++.++++|.++||..||++|..+||.+++|+|++++||||||||+||++|+++++....... ......+
T Consensus 19 ~~~~F~~l~l~~~l~~~L~~~g~~~pt~iQ~~~ip~il~g~dvvi~a~TGsGKTlayllp~l~~l~~~~~~~~~~~~~~~ 98 (238)
T d1wrba1 19 VIENFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAY 98 (238)
T ss_dssp CCCSSGGGSCCCSTTTTTTTTTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHHHTTCC------CCBC
T ss_pred ccCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHhhhhhCCCCEEEECCCCCCcceeeHHHHHHHHHhcccccccccCCCC
Confidence 457899999999999999999999999999999999999999999999999999999999999987653211 1223456
Q ss_pred eEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCe
Q 006737 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGL 535 (633)
Q Consensus 456 ~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l 535 (633)
+++|||+||++||.|+++.+..+.... ++++..++|+.....+..... .++||||+||++|.+++... ...+.++
T Consensus 99 ~~alil~pt~el~~q~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~-~~~~ivV~TP~~l~~~~~~~---~~~l~~v 173 (238)
T d1wrba1 99 PKCLILAPTRELAIQILSESQKFSLNT-PLRSCVVYGGADTHSQIREVQ-MGCHLLVATPGRLVDFIEKN---KISLEFC 173 (238)
T ss_dssp CSEEEECSSHHHHHHHHHHHHHHHTTS-SCCEEEECSSSCSHHHHHHHS-SCCSEEEECHHHHHHHHHTT---SBCCTTC
T ss_pred ceEEEeccchhhhcchheeeeecccCC-CcEEEEEeccchhhHHHhhcc-cCCceeecCHHHHHhHHccC---ceecccc
Confidence 789999999999999999999988765 789999999988776655554 46899999999999999876 4678999
Q ss_pred eEEEEecccccCCcChHHHHHHHHHHCCC----CCcEEEEeccCChhh
Q 006737 536 KMLVLDEADHLLDLGFRKDVENIVDCLPR----RRQSLLFSATMPKEL 579 (633)
Q Consensus 536 ~~LVIDEAD~Lld~gf~~~l~~Il~~lpk----~~Q~IlfSATl~~el 579 (633)
+++||||||.|++.+|..++..|++.+.. ++|+++||||+++++
T Consensus 174 ~~lViDEaD~ll~~~f~~~i~~Il~~~~~~~~~~~Q~il~SAT~~~~v 221 (238)
T d1wrba1 174 KYIVLDEADRMLDMGFEPQIRKIIEESNMPSGINRQTLMFSATFPKEI 221 (238)
T ss_dssp CEEEEETHHHHHHTTCHHHHHHHHHSSCCCCGGGCEEEEEESSCCHHH
T ss_pred ceeeeehhhhhhhhccHHHHHHHHHHhcCCCCCCCEEEEEeeeCCHHH
Confidence 99999999999999999999999987642 689999999999985
No 7
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=3.1e-36 Score=296.45 Aligned_cols=187 Identities=37% Similarity=0.613 Sum_probs=168.5
Q ss_pred ccCccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhCCC-cEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCe
Q 006737 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPI 456 (633)
Q Consensus 378 ~~~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~gr-DvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~ 456 (633)
.++|++|+|++.++++|.++||..|||+|.++||.+++|+ |++++||||+|||++|++|++++... ..++
T Consensus 3 ~msf~~l~l~~~l~~~l~~~g~~~pt~iQ~~~ip~~l~g~~d~iv~a~TGsGKT~~~~l~~~~~~~~---------~~~~ 73 (208)
T d1hv8a1 3 YMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNE---------NNGI 73 (208)
T ss_dssp CCCGGGSSCCHHHHHHHHHHTCCSCCHHHHHHHHHHHHTCSEEEEECCSSSSHHHHHHHHHHHHSCS---------SSSC
T ss_pred ccCHHHcCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCCeeeechhcccccceeeccccccccc---------ccCc
Confidence 4689999999999999999999999999999999999985 99999999999999999999876432 2356
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCee
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLK 536 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~ 536 (633)
++||++||++||.|+++.+..+.... +.++.+++|+.....+...+. +++|||+||++|.+++.+. ...+++++
T Consensus 74 ~~lil~pt~~l~~q~~~~~~~~~~~~-~~~v~~~~g~~~~~~~~~~l~--~~~IlV~TP~~l~~~l~~~---~~~~~~l~ 147 (208)
T d1hv8a1 74 EAIILTPTRELAIQVADEIESLKGNK-NLKIAKIYGGKAIYPQIKALK--NANIVVGTPGRILDHINRG---TLNLKNVK 147 (208)
T ss_dssp CEEEECSCHHHHHHHHHHHHHHHCSS-CCCEEEECTTSCHHHHHHHHH--TCSEEEECHHHHHHHHHTT---CSCTTSCC
T ss_pred ceEEEeeccccchhhhhhhhhhcccC-CeEEEEeeCCCChHHHHHhcC--CCCEEEEChHHHHHHHHcC---CCCcccCc
Confidence 89999999999999999999998755 788999999988777666654 4799999999999999776 46789999
Q ss_pred EEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhh
Q 006737 537 MLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL 579 (633)
Q Consensus 537 ~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el 579 (633)
+|||||||+|++.++..++..|+..+++++|+++||||+|+++
T Consensus 148 ~lViDEad~l~~~~~~~~i~~I~~~~~~~~Q~i~~SAT~~~~v 190 (208)
T d1hv8a1 148 YFILDEADEMLNMGFIKDVEKILNACNKDKRILLFSATMPREI 190 (208)
T ss_dssp EEEEETHHHHHTTTTHHHHHHHHHTSCSSCEEEEECSSCCHHH
T ss_pred EEEEEChHHhhcCCChHHHHHHHHhCCCCCeEEEEEccCCHHH
Confidence 9999999999999999999999999999999999999999875
No 8
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=7.6e-36 Score=292.91 Aligned_cols=188 Identities=36% Similarity=0.579 Sum_probs=169.7
Q ss_pred CccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEE
Q 006737 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVL 459 (633)
Q Consensus 380 ~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vL 459 (633)
+|++|+|++.++++|.++||.+|||+|+++||+++.|+|++++||||||||+||++|+++++.... ..++++
T Consensus 2 sF~~l~L~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKTlay~lp~i~~~~~~~--------~~~~~~ 73 (206)
T d1s2ma1 2 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKL--------NKIQAL 73 (206)
T ss_dssp CGGGGCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHCCTTS--------CSCCEE
T ss_pred ChHHcCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEEecCCcchhhhhhcccccccccccc--------ccccce
Confidence 699999999999999999999999999999999999999999999999999999999998865432 235699
Q ss_pred EEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEEE
Q 006737 460 ILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLV 539 (633)
Q Consensus 460 ILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LV 539 (633)
+++|+++++.|....+..+... .++++.+++|+.........+. .+++|||+||++|.+++... ...+.++++||
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~l~-~~~~Ili~TP~~l~~~l~~~---~~~l~~l~~lV 148 (206)
T d1s2ma1 74 IMVPTRELALQTSQVVRTLGKH-CGISCMVTTGGTNLRDDILRLN-ETVHILVGTPGRVLDLASRK---VADLSDCSLFI 148 (206)
T ss_dssp EECSSHHHHHHHHHHHHHHTTT-TTCCEEEECSSSCHHHHHHHTT-SCCSEEEECHHHHHHHHHTT---CSCCTTCCEEE
T ss_pred eeccchhhhhhhhhhhhhcccc-cCeeEEeecCccchhhHHHHhc-ccceEEEECCcccccccccc---eeecccceEEE
Confidence 9999999999999888887654 4899999999998776666554 45899999999999999876 46799999999
Q ss_pred EecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhhh
Q 006737 540 LDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELV 580 (633)
Q Consensus 540 IDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el~ 580 (633)
|||||.|++.+|...+..|+..+++.+|+++||||+|+++.
T Consensus 149 ~DEaD~l~~~~f~~~v~~I~~~l~~~~Q~il~SATl~~~v~ 189 (206)
T d1s2ma1 149 MDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVK 189 (206)
T ss_dssp EESHHHHSSHHHHHHHHHHHTTSCSSCEEEEEESCCCHHHH
T ss_pred eechhhhhhhhhHHHHHHHHHhCCCCCEEEEEEEeCCHHHH
Confidence 99999999999999999999999999999999999998853
No 9
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=1.4e-34 Score=283.11 Aligned_cols=189 Identities=35% Similarity=0.571 Sum_probs=163.4
Q ss_pred cCccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEE
Q 006737 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYV 458 (633)
Q Consensus 379 ~~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~v 458 (633)
++|++|+|++.++++|.+.||.+||++|++|||.+++|+|++++||||||||+||++|+++.+..... .+.+
T Consensus 1 t~F~~l~L~~~l~~~l~~~g~~~pt~iQ~~aip~~l~G~dvii~a~TGSGKTlayllp~l~~~~~~~~--------~~~~ 72 (209)
T d1q0ua_ 1 TQFTRFPFQPFIIEAIKTLRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLLPIMEKIKPERA--------EVQA 72 (209)
T ss_dssp CCGGGSCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCSSHHHHHHHHHHHHHHCCTTSC--------SCCE
T ss_pred CccccCCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCeEeecccccccceeeeeeeccccccccc--------cccc
Confidence 46999999999999999999999999999999999999999999999999999999999987654322 3468
Q ss_pred EEEcccHHHHHHHHHHHHHHHhcCC---CceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCe
Q 006737 459 LILCPTRELASQIAAEAIALLKNHD---GIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGL 535 (633)
Q Consensus 459 LILvPTReLa~Qi~~~l~~l~~~~~---~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l 535 (633)
++++|+++++.+.+..+........ ...+.++.++.....+.... ..+++|+|+||++|..++.+. ...++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Ilv~TP~~l~~~~~~~---~~~~~~l 148 (209)
T d1q0ua_ 73 VITAPTRELATQIYHETLKITKFCPKDRMIVARCLIGGTDKQKALEKL-NVQPHIVIGTPGRINDFIREQ---ALDVHTA 148 (209)
T ss_dssp EEECSSHHHHHHHHHHHHHHHTTSCGGGCCCEEEECCCSHHHHTTCCC-SSCCSEEEECHHHHHHHHHTT---CCCGGGC
T ss_pred cccccccchhHHHHHHHHhhhccccccccccccccccchhhHHHHHHh-ccCceEEEecCchhhhhhhhh---ccccccc
Confidence 9999999999999988887765442 35566677766655443333 345899999999999998776 3568999
Q ss_pred eEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhh
Q 006737 536 KMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL 579 (633)
Q Consensus 536 ~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el 579 (633)
+++||||||.|++++|..++..|+..+++++|+++||||+|+++
T Consensus 149 ~~lViDEad~ll~~~f~~~v~~I~~~~~~~~Q~il~SATl~~~v 192 (209)
T d1q0ua_ 149 HILVVDEADLMLDMGFITDVDQIAARMPKDLQMLVFSATIPEKL 192 (209)
T ss_dssp CEEEECSHHHHHHTTCHHHHHHHHHTSCTTCEEEEEESCCCGGG
T ss_pred eEEEEeecccccccccHHHHHHHHHHCCCCCEEEEEEccCCHHH
Confidence 99999999999999999999999999999999999999999885
No 10
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.92 E-value=1.2e-25 Score=218.27 Aligned_cols=173 Identities=20% Similarity=0.245 Sum_probs=137.8
Q ss_pred CCHHHHHHHHHcCCCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccH
Q 006737 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTR 465 (633)
Q Consensus 386 L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTR 465 (633)
+++.++..|.+.||.+|+|+|.++++.+++|+|+++++|||+|||++++++++..+.+. .++|||+|++
T Consensus 10 ~~~~~~~~l~~~g~~~l~~~Q~~ai~~l~~~~~~il~apTGsGKT~~a~l~i~~~~~~~-----------~~vl~l~P~~ 78 (202)
T d2p6ra3 10 ISSYAVGILKEEGIEELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIKG-----------GKSLYVVPLR 78 (202)
T ss_dssp HHHHHHHHHHCC---CCCCCCHHHHHHHTTCSCEEEECSSHHHHHHHHHHHHHHHHHTT-----------CCEEEEESSH
T ss_pred hhHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCchhHHHHHHHHHHhhcc-----------CcceeecccH
Confidence 56788999999999999999999999999999999999999999999999998877543 2599999999
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEEEEecccc
Q 006737 466 ELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADH 545 (633)
Q Consensus 466 eLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDEAD~ 545 (633)
+|+.|+++.++++... ...+....|+..... .....++|+++||..+..++.+. ...+..+++||+||+|.
T Consensus 79 ~L~~q~~~~~~~~~~~--~~~v~~~~~~~~~~~----~~~~~~~ii~~~~~~~~~~~~~~---~~~~~~~~~ii~DE~h~ 149 (202)
T d2p6ra3 79 ALAGEKYESFKKWEKI--GLRIGISTGDYESRD----EHLGDCDIIVTTSEKADSLIRNR---ASWIKAVSCLVVDEIHL 149 (202)
T ss_dssp HHHHHHHHHHTTTTTT--TCCEEEECSSCBCCS----SCSTTCSEEEEEHHHHHHHHHTT---CSGGGGCCEEEETTGGG
T ss_pred HHHHHHHHHHHHHhhc--cccceeeccCccccc----ccccccceeeeccHHHHHHHhcc---chhhhhhhhccccHHHH
Confidence 9999999999877653 345556666554332 12234789999999999988765 34578899999999999
Q ss_pred cCCcChHHHHHHH---HHHCCCCCcEEEEeccCChh
Q 006737 546 LLDLGFRKDVENI---VDCLPRRRQSLLFSATMPKE 578 (633)
Q Consensus 546 Lld~gf~~~l~~I---l~~lpk~~Q~IlfSATl~~e 578 (633)
+.+..+...+..+ +..+++++|+|+||||+++.
T Consensus 150 ~~~~~r~~~~~~~l~~i~~~~~~~~~l~lSATl~n~ 185 (202)
T d2p6ra3 150 LDSEKRGATLEILVTKMRRMNKALRVIGLSATAPNV 185 (202)
T ss_dssp GGCTTTHHHHHHHHHHHHHHCTTCEEEEEECCCTTH
T ss_pred hcccccchHHHHHHHHHHhcCCCCcEEEEcCCCCcH
Confidence 9887765554444 44556789999999999875
No 11
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.92 E-value=5.7e-26 Score=225.89 Aligned_cols=179 Identities=17% Similarity=0.103 Sum_probs=130.2
Q ss_pred CccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEE
Q 006737 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVL 459 (633)
Q Consensus 380 ~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vL 459 (633)
.|.+..+.+.+ ..+.+.++.+|+++|+.+++.++.|+|++++||||+|||++|+++++....+. .++|
T Consensus 23 ~~~~~~~~~~~-~~~~~~~~~~p~~~Q~~~i~~~l~g~~~~i~apTGsGKT~~~~~~~~~~~~~~-----------~rvl 90 (237)
T d1gkub1 23 LFPEDFLLKEF-VEFFRKCVGEPRAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLALKG-----------KRCY 90 (237)
T ss_dssp CCTTHHHHHHH-HHHHHTTTCSCCHHHHHHHHHHHTTCCEECCCCBTSCSHHHHHHHHHHHHTTS-----------CCEE
T ss_pred cCccchhHHHH-HHHHHhccCCCCHHHHHHHHHHHCCCCEEEEecCCChHHHHHHHHHHHHHHhc-----------CeEE
Confidence 34444334443 55667789999999999999999999999999999999999999988655322 3699
Q ss_pred EEcccHHHHHHHHHHHHHHHhcCC---CceEEEEECCccchHHHHHHh-cCCCcEEEECchhhHHHHhcccCcccccCCe
Q 006737 460 ILCPTRELASQIAAEAIALLKNHD---GIGVLTLVGGTRFKVDQRRLE-SDPCQILVATPGRLLDHIENKSGLSVRLMGL 535 (633)
Q Consensus 460 ILvPTReLa~Qi~~~l~~l~~~~~---~i~v~~l~Gg~~~~~~~~~l~-~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l 535 (633)
||+||++|+.|+++.+++++.... ...+....++.........+. ...++|||+||++|.+.+ ..+.++
T Consensus 91 iv~Pt~~La~Q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ilv~Tp~~l~~~~-------~~~~~~ 163 (237)
T d1gkub1 91 VIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKHY-------RELGHF 163 (237)
T ss_dssp EEESCHHHHHHHHHHHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGGGCSEEEEEHHHHHHCS-------TTSCCC
T ss_pred EEeccHHHHHHHHHHHHHHHHHcCCceEEEEeeeecccchhhhhhhhccccccceeccChHHHHHhh-------hhcCCC
Confidence 999999999999999999986542 122344444444443333322 234689999999876533 346789
Q ss_pred eEEEEecccccCCcChHHHHHHHHHH-------------CCCCCcEEEEeccCChhh
Q 006737 536 KMLVLDEADHLLDLGFRKDVENIVDC-------------LPRRRQSLLFSATMPKEL 579 (633)
Q Consensus 536 ~~LVIDEAD~Lld~gf~~~l~~Il~~-------------lpk~~Q~IlfSATl~~el 579 (633)
++|||||||.|++.+.. +..++.. .+...|+|++|||+++.+
T Consensus 164 ~~vVvDE~d~~l~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~SAT~~~~~ 218 (237)
T d1gkub1 164 DFIFVDDVDAILKASKN--VDKLLHLLGFHYDLKTKSWVGEARGCLMVSTATAKKGK 218 (237)
T ss_dssp SEEEESCHHHHHTSTHH--HHHHHHHTTEEEETTTTEEEECCSSEEEECCCCSCCCT
T ss_pred CEEEEEChhhhhhcccc--hhHHHHhcCChHHHHHHHhhCCCCCeEEEEeCCCCccc
Confidence 99999999999876532 2222222 234678999999998764
No 12
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.91 E-value=5e-25 Score=214.06 Aligned_cols=177 Identities=19% Similarity=0.235 Sum_probs=135.3
Q ss_pred CccccCCCHHHHHHHHHc-CCCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEE
Q 006737 380 RFDECGISPLTIKALTAA-GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYV 458 (633)
Q Consensus 380 ~F~el~L~~~Ll~~L~~~-g~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~v 458 (633)
..+.++|.+.+.+.|++. ||..++|+|.++|++++.|+|+++++|||||||++|.+|++.. ..++
T Consensus 3 ~~e~~~l~~~~~~~l~~~fg~~~~rp~Q~~ai~~~l~g~~vlv~apTGsGKT~~~~~~~~~~--------------~~~~ 68 (206)
T d1oywa2 3 QAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLL--------------NGLT 68 (206)
T ss_dssp CCCCSSHHHHHHHHHHHTTCCSSCCTTHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHS--------------SSEE
T ss_pred chhhCCCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCCCcchhhhhhhhc--------------cCce
Confidence 357789999999999987 9999999999999999999999999999999999999998742 1269
Q ss_pred EEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccch---HHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCe
Q 006737 459 LILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK---VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGL 535 (633)
Q Consensus 459 LILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~---~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l 535 (633)
+|++|+++|+.|+.+.++.+.. ............ ...........+|+++||..+....... ......+
T Consensus 69 ~~v~P~~~L~~q~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~t~~~~~~~~~~~---~~~~~~v 140 (206)
T d1oywa2 69 VVVSPLISLMKDQVDQLQANGV-----AAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLE---HLAHWNP 140 (206)
T ss_dssp EEECSCHHHHHHHHHHHHHTTC-----CEEEECTTSCHHHHHHHHHHHHHTCCSEEEECHHHHTSTTHHH---HHTTSCE
T ss_pred EEeccchhhhhhHHHHHHhhcc-----cccccccccccccchhHHHHHhcCCceEEEEechhhhchhhcc---cchhhee
Confidence 9999999999999998887742 233333322211 2223334456799999999886543332 2456789
Q ss_pred eEEEEecccccCCcCh--HH---HHHHHHHHCCCCCcEEEEeccCChhh
Q 006737 536 KMLVLDEADHLLDLGF--RK---DVENIVDCLPRRRQSLLFSATMPKEL 579 (633)
Q Consensus 536 ~~LVIDEAD~Lld~gf--~~---~l~~Il~~lpk~~Q~IlfSATl~~el 579 (633)
.+||+||||++.++++ .. .+..++..++ ++|+++||||+++.+
T Consensus 141 ~~lviDEaH~~~~~~~~~~~~~~~~~~l~~~~~-~~~ii~lSATl~~~v 188 (206)
T d1oywa2 141 VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFP-TLPFMALTATADDTT 188 (206)
T ss_dssp EEEEESSGGGGCTTSSCCCHHHHGGGGHHHHCT-TSCEEEEESCCCHHH
T ss_pred eeeeeeeeeeeeccccchHHHHHHHHHHHHhCC-CCceEEEEeCCCHHH
Confidence 9999999999998763 22 3334455554 699999999999975
No 13
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.87 E-value=1.5e-21 Score=187.61 Aligned_cols=162 Identities=20% Similarity=0.212 Sum_probs=128.1
Q ss_pred CCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHH
Q 006737 400 IQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALL 479 (633)
Q Consensus 400 ~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~ 479 (633)
-+|+++|.+++..+. ++|+|+++|||+|||+++++++...+.+.. -++|||+|+++|+.|.++.+.+++
T Consensus 8 ~~pr~~Q~~~~~~~~-~~n~lv~~pTGsGKT~i~~~~~~~~~~~~~----------~~il~i~P~~~L~~q~~~~~~~~~ 76 (200)
T d1wp9a1 8 IQPRIYQEVIYAKCK-ETNCLIVLPTGLGKTLIAMMIAEYRLTKYG----------GKVLMLAPTKPLVLQHAESFRRLF 76 (200)
T ss_dssp HCCCHHHHHHHHHGG-GSCEEEECCTTSCHHHHHHHHHHHHHHHSC----------SCEEEECSSHHHHHHHHHHHHHHB
T ss_pred CCCCHHHHHHHHHHh-cCCeEEEeCCCCcHHHHHHHHHHHHHHhcC----------CcEEEEcCchHHHHHHHHHHHHhh
Confidence 379999999999876 568999999999999999988877665432 148999999999999999999987
Q ss_pred hcCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEEEEecccccCCcChHHHHHHHH
Q 006737 480 KNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559 (633)
Q Consensus 480 ~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDEAD~Lld~gf~~~l~~Il 559 (633)
... +..+..+.++.........+.. ++|+|+||+.+...+... ...+.++++||+||||++........+...+
T Consensus 77 ~~~-~~~v~~~~~~~~~~~~~~~~~~--~~i~i~t~~~~~~~~~~~---~~~~~~~~~vIiDE~H~~~~~~~~~~~~~~~ 150 (200)
T d1wp9a1 77 NLP-PEKIVALTGEKSPEERSKAWAR--AKVIVATPQTIENDLLAG---RISLEDVSLIVFDEAHRAVGNYAYVFIAREY 150 (200)
T ss_dssp CSC-GGGEEEECSCSCHHHHHHHHHH--CSEEEECHHHHHHHHHTT---SCCTTSCSEEEEETGGGCSTTCHHHHHHHHH
T ss_pred ccc-ccceeeeecccchhHHHHhhhc--ccccccccchhHHHHhhh---hhhccccceEEEEehhhhhcchhHHHHHHHH
Confidence 543 6778777777665544444333 589999999999888765 3567899999999999998765555555555
Q ss_pred HHCCCCCcEEEEeccCChh
Q 006737 560 DCLPRRRQSLLFSATMPKE 578 (633)
Q Consensus 560 ~~lpk~~Q~IlfSATl~~e 578 (633)
.......++++||||.+..
T Consensus 151 ~~~~~~~~~l~~SATp~~~ 169 (200)
T d1wp9a1 151 KRQAKNPLVIGLTASPGST 169 (200)
T ss_dssp HHHCSSCCEEEEESCSCSS
T ss_pred HhcCCCCcEEEEEecCCCc
Confidence 5555678999999998654
No 14
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=99.80 E-value=2e-20 Score=189.95 Aligned_cols=138 Identities=17% Similarity=0.232 Sum_probs=98.3
Q ss_pred HhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEEC
Q 006737 413 CLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492 (633)
Q Consensus 413 il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~G 492 (633)
+..++++|+.||||||||++|+++++....... .++|||+||++||.|+++.+..+..... ...
T Consensus 6 ~~~~~~~lv~~~TGsGKT~~~l~~~~~~~~~~~----------~~~lvi~Ptr~La~q~~~~l~~~~~~~~-----~~~- 69 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGKTKRYLPAIVREAIKRG----------LRTLILAPTRVVAAEMEEALRGLPIRYQ-----TPA- 69 (305)
T ss_dssp SSTTCEEEECCCTTSSTTTTHHHHHHHHHHHHT----------CCEEEEESSHHHHHHHHHHTTTSCCBCC-----C---
T ss_pred hhcCCcEEEEECCCCCHHHHHHHHHHHHHHhcC----------CEEEEEccHHHHHHHHHHHHhcCCccee-----eeE-
Confidence 457899999999999999999989887766542 3699999999999999888765532211 110
Q ss_pred CccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEEEEecccccCCcCh--HHHHHHHHHHCCCCCcEEE
Q 006737 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF--RKDVENIVDCLPRRRQSLL 570 (633)
Q Consensus 493 g~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDEAD~Lld~gf--~~~l~~Il~~lpk~~Q~Il 570 (633)
..........|+++||+.|..++... ..+.++++|||||||++..+++ ...+..+. .....|+++
T Consensus 70 -------~~~~~~~~~~i~~~t~~~l~~~~~~~----~~~~~~~~vViDE~H~~~~~~~~~~~~l~~~~--~~~~~~~v~ 136 (305)
T d2bmfa2 70 -------IRAEHTGREIVDLMCHATFTMRLLSP----IRVPNYNLIIMDEAHFTDPASIAARGYISTRV--EMGEAAGIF 136 (305)
T ss_dssp -------------CCCSEEEEEHHHHHHHHTSS----SCCCCCSEEEEESTTCCSHHHHHHHHHHHHHH--HHTSCEEEE
T ss_pred -------EeecccCccccccCCcHHHHHHHhcC----ccccceeEEEeeeeeecchhhHHHHHHHHHhh--ccccceEEE
Confidence 01112234589999999988877544 4578899999999999987653 22222221 235789999
Q ss_pred EeccCChhh
Q 006737 571 FSATMPKEL 579 (633)
Q Consensus 571 fSATl~~el 579 (633)
+|||.+...
T Consensus 137 ~SAT~~~~~ 145 (305)
T d2bmfa2 137 MTATPPGSR 145 (305)
T ss_dssp ECSSCTTCC
T ss_pred eecCCCcce
Confidence 999998764
No 15
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.66 E-value=4.9e-17 Score=145.00 Aligned_cols=136 Identities=19% Similarity=0.242 Sum_probs=90.6
Q ss_pred HhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEEC
Q 006737 413 CLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492 (633)
Q Consensus 413 il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~G 492 (633)
+..|+++++++|||+|||++++..++....... .++||++|+++|+.|.++.+... ...+ ...
T Consensus 4 l~~~~~~il~~~tGsGKT~~~~~~~~~~~~~~~----------~~vli~~p~~~l~~q~~~~~~~~-----~~~~--~~~ 66 (140)
T d1yksa1 4 LKKGMTTVLDFHPGAGKTRRFLPQILAECARRR----------LRTLVLAPTRVVLSEMKEAFHGL-----DVKF--HTQ 66 (140)
T ss_dssp TSTTCEEEECCCTTSSTTTTHHHHHHHHHHHTT----------CCEEEEESSHHHHHHHHHHTTTS-----CEEE--ESS
T ss_pred HHcCCcEEEEcCCCCChhHHHHHHHHHHhhhcC----------ceeeeeecchhHHHHHHHHhhhh-----hhhh--ccc
Confidence 346889999999999999988766666654432 35999999999999987665322 2222 211
Q ss_pred CccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEEEEecccccCCcChHH-HHHHHHHHCCCCCcEEEE
Q 006737 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK-DVENIVDCLPRRRQSLLF 571 (633)
Q Consensus 493 g~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDEAD~Lld~gf~~-~l~~Il~~lpk~~Q~Ilf 571 (633)
..... ......+.++|...+....... ..+.++++|||||||.+...++.. .+...+.. .++.++|+|
T Consensus 67 ~~~~~------~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~lvIiDEaH~~~~~~~~~~~~~~~~~~-~~~~~~l~l 135 (140)
T d1yksa1 67 AFSAH------GSGREVIDAMCHATLTYRMLEP----TRVVNWEVIIMDEAHFLDPASIAARGWAAHRAR-ANESATILM 135 (140)
T ss_dssp CCCCC------CCSSCCEEEEEHHHHHHHHTSS----SCCCCCSEEEETTTTCCSHHHHHHHHHHHHHHH-TTSCEEEEE
T ss_pred ccccc------cccccchhhhhHHHHHHHHhcc----ccccceeEEEEccccccChhhHHHHHHHHHHhh-CCCCCEEEE
Confidence 11111 1122467888888776655443 567899999999999886443221 12222223 357999999
Q ss_pred eccCC
Q 006737 572 SATMP 576 (633)
Q Consensus 572 SATl~ 576 (633)
|||.|
T Consensus 136 TATPp 140 (140)
T d1yksa1 136 TATPP 140 (140)
T ss_dssp CSSCT
T ss_pred EcCCC
Confidence 99987
No 16
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.63 E-value=3.2e-15 Score=148.21 Aligned_cols=170 Identities=21% Similarity=0.168 Sum_probs=130.0
Q ss_pred CCCHHHHHHHHHcCCCCCcHHHHHHHHHHhC----C--CcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEE
Q 006737 385 GISPLTIKALTAAGYIQMTRVQEATLSACLE----G--KDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYV 458 (633)
Q Consensus 385 ~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~----g--rDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~v 458 (633)
..+....+.+.+.-...+|+-|..++..|.+ + .+.+++|.||||||.+|+..++..+... -+|
T Consensus 39 ~~~~~~~~~~~~~lP~~lt~~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~g-----------~qv 107 (233)
T d2eyqa3 39 KHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNH-----------KQV 107 (233)
T ss_dssp CCCHHHHHHHHHTCCSCCCHHHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHTTT-----------CEE
T ss_pred CCCHHHHHhhhhccccccchhHHHHHHHHHHHHhccCccCeEEEcCCCCCcHHHHHHHHHHHHHcC-----------Cce
Confidence 3456777777766556899999999988754 3 3789999999999999999887766332 369
Q ss_pred EEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHH---HHHHhcCCCcEEEECchhhHHHHhcccCcccccCCe
Q 006737 459 LILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD---QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGL 535 (633)
Q Consensus 459 LILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~---~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l 535 (633)
++++||..|+.|.++.+++++... ++.+.++++....... ...+..+.++|||+|--.|. . .+.+.++
T Consensus 108 ~~l~Pt~~La~Q~~~~~~~~~~~~-~~~v~~l~~~~~~~~~~~~~~~~~~g~~~iviGths~l~----~----~~~f~~L 178 (233)
T d2eyqa3 108 AVLVPTTLLAQQHYDNFRDRFANW-PVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQ----S----DVKFKDL 178 (233)
T ss_dssp EEECSSHHHHHHHHHHHHHHSTTT-TCCEEEESTTSCHHHHHHHHHHHHTTCCSEEEECTHHHH----S----CCCCSSE
T ss_pred EEEccHHHhHHHHHHHHHHHHhhC-CCEEEeccCcccchhHHHHHHHHhCCCCCEEEeehhhhc----c----CCccccc
Confidence 999999999999999999998766 7889999998775543 34667788999999954443 2 2567899
Q ss_pred eEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhh
Q 006737 536 KMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL 579 (633)
Q Consensus 536 ~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el 579 (633)
.+|||||-|+..- . +-..+ .....+..++++|||-.+..
T Consensus 179 gLiIiDEeH~fg~---k-Q~~~l-~~~~~~~~~l~~SATPiprt 217 (233)
T d2eyqa3 179 GLLIVDEEHRFGV---R-HKERI-KAMRANVDILTLTATPIPRT 217 (233)
T ss_dssp EEEEEESGGGSCH---H-HHHHH-HHHHTTSEEEEEESSCCCHH
T ss_pred cceeeechhhhhh---H-HHHHH-HhhCCCCCEEEEecchhHHH
Confidence 9999999998542 2 22223 22334688999999987773
No 17
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=99.60 E-value=8.2e-16 Score=156.77 Aligned_cols=153 Identities=16% Similarity=0.179 Sum_probs=109.6
Q ss_pred CCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHh
Q 006737 401 QMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480 (633)
Q Consensus 401 ~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~ 480 (633)
.|++.|.+++..++.++..++.+|||+|||++..+ ++..+..... .++|||||+++|+.|.++.+.+++.
T Consensus 113 ~~rdyQ~~av~~~l~~~~~il~~pTGsGKT~i~~~-i~~~~~~~~~---------~k~Liivp~~~Lv~Q~~~~f~~~~~ 182 (282)
T d1rifa_ 113 EPHWYQKDAVFEGLVNRRRILNLPTSAGRSLIQAL-LARYYLENYE---------GKILIIVPTTALTTQMADDFVDYRL 182 (282)
T ss_dssp CCCHHHHHHHHHHHHHSEEEECCCTTSCHHHHHHH-HHHHHHHHCS---------SEEEEECSSHHHHHHHHHHHHHHTS
T ss_pred ccchHHHHHHHHHHhcCCceeEEEcccCccHHHHH-HHHHhhhccc---------ceEEEEEcCchhHHHHHHHHHHhhc
Confidence 69999999999999999999999999999987544 3333333221 2699999999999999999998864
Q ss_pred cCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEEEEecccccCCcChHHHHHHHHH
Q 006737 481 NHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560 (633)
Q Consensus 481 ~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~ 560 (633)
.. ...+..+.+|...... .....+|+|+|+..+..+.. ..+.++++||+||||++- ...+..|+.
T Consensus 183 ~~-~~~~~~~~~g~~~~~~----~~~~~~i~i~t~qs~~~~~~------~~~~~f~~VIvDEaH~~~----a~~~~~il~ 247 (282)
T d1rifa_ 183 FS-HAMIKKIGGGASKDDK----YKNDAPVVVGTWQTVVKQPK------EWFSQFGMMMNDECHLAT----GKSISSIIS 247 (282)
T ss_dssp CC-GGGEEECSTTCSSTTC----CCTTCSEEEECHHHHTTSCG------GGGGGEEEEEEETGGGCC----HHHHHHHTT
T ss_pred cc-cccceeecceeccccc----ccccceEEEEeeehhhhhcc------cccCCCCEEEEECCCCCC----chhHHHHHH
Confidence 32 3345555555432211 12236899999877654322 236789999999999975 346677777
Q ss_pred HCCCCCcEEEEeccCChh
Q 006737 561 CLPRRRQSLLFSATMPKE 578 (633)
Q Consensus 561 ~lpk~~Q~IlfSATl~~e 578 (633)
.+.+....++||||++..
T Consensus 248 ~~~~~~~rlGlTaT~~~~ 265 (282)
T d1rifa_ 248 GLNNCMFKFGLSGSLRDG 265 (282)
T ss_dssp TCTTCCEEEEECSSCCTT
T ss_pred hccCCCeEEEEEeecCCC
Confidence 665444468999998654
No 18
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.60 E-value=4.4e-15 Score=149.78 Aligned_cols=164 Identities=16% Similarity=0.213 Sum_probs=122.3
Q ss_pred HHHHHHH-HcCCCCCcHHHHHHHHHHhC----C--CcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEE
Q 006737 389 LTIKALT-AAGYIQMTRVQEATLSACLE----G--KDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLIL 461 (633)
Q Consensus 389 ~Ll~~L~-~~g~~~pt~iQ~~aIp~il~----g--rDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLIL 461 (633)
.+.+.+. +..| .+|.-|..|+..|.. + .+.+++|-||||||.+|+..++..+.... +|+++
T Consensus 71 ~l~~~f~~~LPF-eLT~~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~-----------q~~~m 138 (264)
T d1gm5a3 71 KLAEEFIKSLPF-KLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGF-----------QTAFM 138 (264)
T ss_dssp HHHHHHHHHSSS-CCCHHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHHHTS-----------CEEEE
T ss_pred HHHHHHHhhccc-cCCchHHHHHHHHHHHhhccCcceeeeeccccccccHHHHHHHHHHHhccc-----------ceeEE
Confidence 4444444 4455 799999999998864 2 37899999999999999998887776543 49999
Q ss_pred cccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHH---HHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEE
Q 006737 462 CPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD---QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKML 538 (633)
Q Consensus 462 vPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~---~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~L 538 (633)
+||..||.|.++.+.+++... ++.+.+++|+...... ...+.++.++|||||-.-|.+ . +.+.++.+|
T Consensus 139 ~Pt~~La~Qh~~~~~~~f~~~-~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~~~----~----~~f~~Lglv 209 (264)
T d1gm5a3 139 VPTSILAIQHYRRTVESFSKF-NIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQE----D----VHFKNLGLV 209 (264)
T ss_dssp CSCHHHHHHHHHHHHHHHTCS-SCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHHH----C----CCCSCCCEE
T ss_pred eehHhhhHHHHHHHHHhhhhc-cccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHhcC----C----CCcccccee
Confidence 999999999999999999766 7889999998875542 455667889999999654432 2 557799999
Q ss_pred EEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChh
Q 006737 539 VLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE 578 (633)
Q Consensus 539 VIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~e 578 (633)
||||-|+..-... ..+..-..++.++++|||--+.
T Consensus 210 iiDEqH~fgv~Qr-----~~l~~~~~~~~~l~~SATPipr 244 (264)
T d1gm5a3 210 IIDEQHRFGVKQR-----EALMNKGKMVDTLVMSATPIPR 244 (264)
T ss_dssp EEESCCCC----------CCCCSSSSCCCEEEEESSCCCH
T ss_pred eeccccccchhhH-----HHHHHhCcCCCEEEEECCCCHH
Confidence 9999999763221 1111122358899999996555
No 19
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.60 E-value=1.6e-15 Score=147.23 Aligned_cols=136 Identities=23% Similarity=0.199 Sum_probs=99.7
Q ss_pred CCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHh
Q 006737 401 QMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480 (633)
Q Consensus 401 ~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~ 480 (633)
+|+++|.+++..+++++..++++|||+|||++++.. +..+ . .++|||||+++|+.|..+.+..+..
T Consensus 70 ~Lr~yQ~eav~~~~~~~~~ll~~~tG~GKT~~a~~~-~~~~---~----------~~~Liv~p~~~L~~q~~~~~~~~~~ 135 (206)
T d2fz4a1 70 SLRDYQEKALERWLVDKRGCIVLPTGSGKTHVAMAA-INEL---S----------TPTLIVVPTLALAEQWKERLGIFGE 135 (206)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEESSSTTHHHHHHHH-HHHS---C----------SCEEEEESSHHHHHHHHHHHGGGCG
T ss_pred CcCHHHHHHHHHHHhCCCcEEEeCCCCCceehHHhH-HHHh---c----------CceeEEEcccchHHHHHHHHHhhcc
Confidence 689999999999999999999999999999875432 2221 1 2489999999999999988876532
Q ss_pred cCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEEEEecccccCCcChHHHHHHHHH
Q 006737 481 NHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560 (633)
Q Consensus 481 ~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~ 560 (633)
..+....|+.. ...+|+|+|...+....... ...+++||+||||++... .+..++.
T Consensus 136 ----~~~~~~~~~~~----------~~~~i~i~t~~~~~~~~~~~------~~~~~lvIiDEaH~~~a~----~~~~i~~ 191 (206)
T d2fz4a1 136 ----EYVGEFSGRIK----------ELKPLTVSTYDSAYVNAEKL------GNRFMLLIFDEVHHLPAE----SYVQIAQ 191 (206)
T ss_dssp ----GGEEEESSSCB----------CCCSEEEEEHHHHHHTHHHH------TTTCSEEEEECSSCCCTT----THHHHHH
T ss_pred ----cchhhcccccc----------cccccccceehhhhhhhHhh------CCcCCEEEEECCeeCCcH----HHHHHHh
Confidence 23444444432 12479999998877654432 357889999999998643 3455565
Q ss_pred HCCCCCcEEEEeccC
Q 006737 561 CLPRRRQSLLFSATM 575 (633)
Q Consensus 561 ~lpk~~Q~IlfSATl 575 (633)
.++ ....++||||+
T Consensus 192 ~~~-~~~~lgLTATl 205 (206)
T d2fz4a1 192 MSI-APFRLGLTATF 205 (206)
T ss_dssp TCC-CSEEEEEEESC
T ss_pred ccC-CCcEEEEecCC
Confidence 554 34578899997
No 20
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.52 E-value=1.9e-14 Score=129.64 Aligned_cols=127 Identities=20% Similarity=0.135 Sum_probs=86.4
Q ss_pred CCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCc
Q 006737 415 EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~ 494 (633)
..+..++.+|||||||+.+ +.+ +... +.++||++|+++|+.|+.+.+.+.+... .....++.
T Consensus 7 ~~~~~ll~apTGsGKT~~~--~~~--~~~~----------~~~vli~~P~~~l~~q~~~~~~~~~~~~----~~~~~~~~ 68 (136)
T d1a1va1 7 SFQVAHLHAPTGSGKSTKV--PAA--YAAQ----------GYKVLVLNPSVAATLGFGAYMSKAHGVD----PNIRTGVR 68 (136)
T ss_dssp SCEEEEEECCTTSCTTTHH--HHH--HHTT----------TCCEEEEESCHHHHHHHHHHHHHHHSCC----CEEECSSC
T ss_pred CCCEEEEEeCCCCCHHHHH--HHH--HHHc----------CCcEEEEcChHHHHHHHHHHHHHHhhcc----cccccccc
Confidence 3567899999999999743 222 2221 1359999999999999999998876432 23333333
Q ss_pred cchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEEEEecccccCCcChHHHHHHHHHHCC--CCCcEEEEe
Q 006737 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP--RRRQSLLFS 572 (633)
Q Consensus 495 ~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lp--k~~Q~IlfS 572 (633)
... ....++++|.+.+..... ..+.++++|||||+|++... ....+..++..+. .+.++|++|
T Consensus 69 ~~~--------~~~~~~~~~~~~~~~~~~------~~~~~~~~vIiDE~H~~~~~-~~~~~~~~l~~~~~~~~~~~l~~T 133 (136)
T d1a1va1 69 TIT--------TGSPITYSTYGKFLADGG------CSGGAYDIIICDECHSTDAT-SILGIGTVLDQAETAGARLVVLAT 133 (136)
T ss_dssp EEC--------CCCSEEEEEHHHHHHTTG------GGGCCCSEEEEETTTCCSHH-HHHHHHHHHHHTTTTTCSEEEEEE
T ss_pred ccc--------cccceEEEeeeeeccccc------hhhhcCCEEEEecccccCHH-HHHHHHHHHHHHHHCCCCcEEEEe
Confidence 221 124789999887654432 34788999999999987432 3334556666654 356789999
Q ss_pred cc
Q 006737 573 AT 574 (633)
Q Consensus 573 AT 574 (633)
||
T Consensus 134 AT 135 (136)
T d1a1va1 134 AT 135 (136)
T ss_dssp SS
T ss_pred CC
Confidence 98
No 21
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=98.76 E-value=9.8e-08 Score=96.25 Aligned_cols=163 Identities=16% Similarity=0.232 Sum_probs=101.6
Q ss_pred CCcHHHHHHHHHHh---------CCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHH
Q 006737 401 QMTRVQEATLSACL---------EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQI 471 (633)
Q Consensus 401 ~pt~iQ~~aIp~il---------~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi 471 (633)
.+.|+|.+++.-+. .+..+|++-..|.|||+..+ .++..+........ .....+|||+|.. |+.|.
T Consensus 55 ~Lr~hQ~~gv~~l~~~~~~~~~~~~~g~iLaDemGlGKT~qai-a~l~~l~~~~~~~~---~~~~~~LIV~P~s-l~~qW 129 (298)
T d1z3ix2 55 VLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCI-TLIWTLLKQSPDCK---PEIDKVIVVSPSS-LVRNW 129 (298)
T ss_dssp TCCHHHHHHHHHHHHHHTTSSSTTCCEEEECCCTTSCHHHHHH-HHHHHHHHCCTTSS---CSCSCEEEEECHH-HHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhhhccCCceEEEeCCCCCHHHHHH-HHHHHHHHhccccc---CCCCcEEEEccch-hhHHH
Confidence 67899999997552 34568888899999998533 34444444322110 1112489999975 88899
Q ss_pred HHHHHHHHhcCCCceEEEEECCccchHHHHH---Hhc----CCCcEEEECchhhHHHHhcccCcccccCCeeEEEEeccc
Q 006737 472 AAEAIALLKNHDGIGVLTLVGGTRFKVDQRR---LES----DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEAD 544 (633)
Q Consensus 472 ~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~---l~~----~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDEAD 544 (633)
.+++.+++.. ...+..++++......... ... ...+|+|+|...+...... ..-....+||+||||
T Consensus 130 ~~Ei~k~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~sy~~~~~~~~~-----l~~~~~~~vI~DEaH 202 (298)
T d1z3ix2 130 YNEVGKWLGG--RVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAEV-----LHKGKVGLVICDEGH 202 (298)
T ss_dssp HHHHHHHHGG--GCCEEEECSSCHHHHHHHHHHHHCCCSSCCSCCEEEEEHHHHHHHTTT-----TTTSCCCEEEETTGG
T ss_pred HHHHHhhcCC--ceeEEEEeCchHHHHHHHHHHhhhccCccccceEEEEeecccccchhc-----ccccceeeeeccccc
Confidence 9999988753 3455566666543322211 111 2357999998877654432 222356789999999
Q ss_pred ccCCcChHHHHHHHHHHCCCCCcEEEEeccCChh
Q 006737 545 HLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE 578 (633)
Q Consensus 545 ~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~e 578 (633)
.+-+.. ......+..+. ....+++|||.-..
T Consensus 203 ~ikn~~--s~~~~a~~~l~-~~~rllLTGTPi~N 233 (298)
T d1z3ix2 203 RLKNSD--NQTYLALNSMN-AQRRVLISGTPIQN 233 (298)
T ss_dssp GCCTTC--HHHHHHHHHHC-CSEEEEECSSCSGG
T ss_pred cccccc--chhhhhhhccc-cceeeeecchHHhh
Confidence 997653 22222333333 45578999998544
No 22
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.49 E-value=2e-07 Score=90.21 Aligned_cols=150 Identities=15% Similarity=0.189 Sum_probs=93.6
Q ss_pred CCcHHHHHHHHHHh----CCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHH
Q 006737 401 QMTRVQEATLSACL----EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAI 476 (633)
Q Consensus 401 ~pt~iQ~~aIp~il----~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~ 476 (633)
.+.|+|.+++..+. .+..+|+.-.+|.|||+..+ .++..+...... .++|||+| ..++.|..+++.
T Consensus 12 ~L~~yQ~~~v~~~~~~~~~~~g~iLaDe~GlGKT~~~i-~~~~~~~~~~~~--------~~~LIv~p-~~l~~~W~~e~~ 81 (230)
T d1z63a1 12 NLRPYQIKGFSWMRFMNKLGFGICLADDMGLGKTLQTI-AVFSDAKKENEL--------TPSLVICP-LSVLKNWEEELS 81 (230)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCCEEECCCTTSCHHHHHH-HHHHHHHHTTCC--------SSEEEEEC-STTHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhhhcCCCEEEEeCCCCChHHHHH-Hhhhhhhhcccc--------cccceecc-hhhhhHHHHHHH
Confidence 57899999987543 35578999999999999754 344444443221 14899999 566778888888
Q ss_pred HHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEEEEecccccCCcChHHHHH
Q 006737 477 ALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556 (633)
Q Consensus 477 ~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDEAD~Lld~gf~~~l~ 556 (633)
.+.. ...+.......... .....+|+|+|...+...-. +.--...+||+||||.+-...- ...
T Consensus 82 ~~~~---~~~~~~~~~~~~~~------~~~~~~vvi~~~~~~~~~~~------l~~~~~~~vI~DEah~~k~~~s--~~~ 144 (230)
T d1z63a1 82 KFAP---HLRFAVFHEDRSKI------KLEDYDIILTTYAVLLRDTR------LKEVEWKYIVIDEAQNIKNPQT--KIF 144 (230)
T ss_dssp HHCT---TSCEEECSSSTTSC------CGGGSSEEEEEHHHHTTCHH------HHTCCEEEEEEETGGGGSCTTS--HHH
T ss_pred hhcc---cccceeeccccchh------hccCcCEEEeeHHHHHhHHH------HhcccceEEEEEhhhcccccch--hhh
Confidence 7754 33343332222111 11235899999877643221 1122567899999999976532 222
Q ss_pred HHHHHCCCCCcEEEEeccCChh
Q 006737 557 NIVDCLPRRRQSLLFSATMPKE 578 (633)
Q Consensus 557 ~Il~~lpk~~Q~IlfSATl~~e 578 (633)
..+..+. ....+++|||.-..
T Consensus 145 ~~~~~l~-a~~r~~LTgTPi~n 165 (230)
T d1z63a1 145 KAVKELK-SKYRIALTGTPIEN 165 (230)
T ss_dssp HHHHTSC-EEEEEEECSSCSTT
T ss_pred hhhhhhc-cceEEEEecchHHh
Confidence 3334443 33468899997544
No 23
>d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=98.37 E-value=1.2e-06 Score=86.78 Aligned_cols=130 Identities=23% Similarity=0.239 Sum_probs=98.6
Q ss_pred CCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHh
Q 006737 401 QMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480 (633)
Q Consensus 401 ~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~ 480 (633)
+++++|.-.--.+..|+ |+...||-|||++..+|+.-..+..+ .|-||+..--||..=.+.+..+..
T Consensus 80 RhyDVQLiGgi~L~~G~--iaem~TGEGKTL~a~l~a~l~al~g~-----------~vhvvTvNdyLA~RDae~m~~iy~ 146 (273)
T d1tf5a3 80 FPFKVQLMGGVALHDGN--IAEMKTGEGKTLTSTLPVYLNALTGK-----------GVHVVTVNEYLASRDAEQMGKIFE 146 (273)
T ss_dssp CCCHHHHHHHHHHHTTS--EEECCTTSCHHHHHHHHHHHHHTTSS-----------CEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EEehhHHHHHHHHHhhh--heeecCCCcchhHHHHHHHHHHhcCC-----------CceEEecCccccchhhhHHhHHHH
Confidence 78899988888888886 89999999999999998875544432 277888889999887777888877
Q ss_pred cCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhh-HHHHhcccCc---ccccCCeeEEEEecccccC
Q 006737 481 NHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRL-LDHIENKSGL---SVRLMGLKMLVLDEADHLL 547 (633)
Q Consensus 481 ~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrL-l~lL~~~~~~---~~~Ls~l~~LVIDEAD~Ll 547 (633)
.+ |+.|.++..+.......... .|||+++|..-| .++|...-.. ......+.+.||||+|.++
T Consensus 147 ~l-Glsvg~~~~~~~~~~r~~~Y---~~di~Ygt~~e~~fDyLrd~~~~~~~~~~~r~~~~aIvDEvDsil 213 (273)
T d1tf5a3 147 FL-GLTVGLNLNSMSKDEKREAY---AADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSIL 213 (273)
T ss_dssp HT-TCCEEECCTTSCHHHHHHHH---HSSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEEETHHHHH
T ss_pred Hc-CCCccccccccCHHHHHHHh---hCCceecchhhhhhhhcchhhhcChhhhccCCCCEEEEEcchhhh
Confidence 66 89999988776655444433 379999999887 4555433111 1235678999999999876
No 24
>d1nkta3 c.37.1.19 (A:-15-225,A:350-396) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.31 E-value=1.5e-06 Score=86.42 Aligned_cols=130 Identities=22% Similarity=0.214 Sum_probs=97.8
Q ss_pred CCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHh
Q 006737 401 QMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480 (633)
Q Consensus 401 ~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~ 480 (633)
++.++|.-.--.+..|+ |+...||-|||++..+|+.-..+..+ .|-||+..-.||..=.+.+..+..
T Consensus 97 RhyDVQLiGgi~l~~g~--iaem~TGEGKTL~a~l~a~l~al~g~-----------~vhvvTvNdyLA~RDa~~m~~~y~ 163 (288)
T d1nkta3 97 RPFDVQVMGAAALHLGN--VAEMKTGEGKTLTCVLPAYLNALAGN-----------GVHIVTVNDYLAKRDSEWMGRVHR 163 (288)
T ss_dssp CCCHHHHHHHHHHHTTE--EEECCTTSCHHHHTHHHHHHHHTTTS-----------CEEEEESSHHHHHHHHHHHHHHHH
T ss_pred eeeeehhHHHHHHhhhh--hhcccCCCchhHHHHHHHHHHHhcCC-----------CeEEEecCchhhhhhHHHHHHHHH
Confidence 67888887776777664 89999999999999999875554432 277888899999987888888877
Q ss_pred cCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhh-HHHHhcccC---cccccCCeeEEEEecccccC
Q 006737 481 NHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRL-LDHIENKSG---LSVRLMGLKMLVLDEADHLL 547 (633)
Q Consensus 481 ~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrL-l~lL~~~~~---~~~~Ls~l~~LVIDEAD~Ll 547 (633)
.+ |+.|+++..+.......... .|||+++|...| .++|...-. .......+.+.||||||.++
T Consensus 164 ~l-Glsvg~~~~~~~~~~~~~~Y---~~di~Y~t~~e~gfDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiL 230 (288)
T d1nkta3 164 FL-GLQVGVILATMTPDERRVAY---NADITYGTNNEFGFDYLRDNMAHSLDDLVQRGHHYAIVDEVDSIL 230 (288)
T ss_dssp HT-TCCEEECCTTCCHHHHHHHH---HSSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEETTHHHHH
T ss_pred Hh-CCCcCcccccCChHHHHHHh---hcccccccHHHHhhhhhhhhhccChhhhcccCCcEEEEEcccccc
Confidence 66 99999998887765544433 379999999887 455543311 11235678899999999776
No 25
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=97.82 E-value=2.1e-05 Score=81.28 Aligned_cols=146 Identities=18% Similarity=0.218 Sum_probs=86.9
Q ss_pred CCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHh
Q 006737 401 QMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480 (633)
Q Consensus 401 ~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~ 480 (633)
.....|..|+..++.++-++|+|+.|||||... ..++..+..... ..+.++++++||-..|..+.+.+.....
T Consensus 148 ~~~~~Q~~A~~~al~~~~~vI~G~pGTGKTt~i-~~~l~~l~~~~~------~~~~~I~l~ApTgkAA~~L~e~~~~~~~ 220 (359)
T d1w36d1 148 DEINWQKVAAAVALTRRISVISGGPGTGKTTTV-AKLLAALIQMAD------GERCRIRLAAPTGKAAARLTESLGKALR 220 (359)
T ss_dssp TSCCHHHHHHHHHHTBSEEEEECCTTSTHHHHH-HHHHHHHHHTCS------SCCCCEEEEBSSHHHHHHHHHHHTHHHH
T ss_pred ccccHHHHHHHHHHcCCeEEEEcCCCCCceehH-HHHHHHHHHHHh------ccCCeEEEecCcHHHHHHHHHHHHHHHh
Confidence 456789999999999999999999999999863 333444443221 1234699999999999888777655443
Q ss_pred cCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccC---cccccCCeeEEEEecccccCCcChHHHHHH
Q 006737 481 NHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSG---LSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557 (633)
Q Consensus 481 ~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~---~~~~Ls~l~~LVIDEAD~Lld~gf~~~l~~ 557 (633)
....... .. . ....-..|..+++........ .......+++||||||-.+. ...+..
T Consensus 221 ~~~~~~~------~~-~---------~~~~~~~t~~~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv~----~~l~~~ 280 (359)
T d1w36d1 221 QLPLTDE------QK-K---------RIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMID----LPMMSR 280 (359)
T ss_dssp HSSCCSC------CC-C---------SCSCCCBTTTSCC-----------CTTSCCSCSEEEECSGGGCB----HHHHHH
T ss_pred hcCchhh------hh-h---------hhhhhhhHHHHHHhhhhcchHHHHhhhcccccceeeehhhhccC----HHHHHH
Confidence 2210000 00 0 000011222222211111000 01223467899999998764 346778
Q ss_pred HHHHCCCCCcEEEEec
Q 006737 558 IVDCLPRRRQSLLFSA 573 (633)
Q Consensus 558 Il~~lpk~~Q~IlfSA 573 (633)
++..++...++|++-=
T Consensus 281 ll~~~~~~~~lILvGD 296 (359)
T d1w36d1 281 LIDALPDHARVIFLGD 296 (359)
T ss_dssp HHHTCCTTCEEEEEEC
T ss_pred HHHHhcCCCEEEEECC
Confidence 8888888888888753
No 26
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=97.05 E-value=0.00048 Score=67.37 Aligned_cols=71 Identities=14% Similarity=0.136 Sum_probs=51.2
Q ss_pred CCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHh
Q 006737 401 QMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480 (633)
Q Consensus 401 ~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~ 480 (633)
+++|-|.+++.. ....++|.|+.|||||.+.+. .+..++..... ++-++|||++|+.+|..+...+.++..
T Consensus 1 ~L~~eQ~~av~~--~~~~~lI~g~aGTGKTt~l~~-rv~~ll~~~~~------~~~~ILvlt~tn~a~~~i~~~~~~~~~ 71 (306)
T d1uaaa1 1 RLNPGQQQAVEF--VTGPCLVLAGAGSGKTRVITN-KIAHLIRGCGY------QARHIAAVTFTNKAAREMKERVGQTLG 71 (306)
T ss_dssp CCCHHHHHHHHC--CSSEEEECCCTTSCHHHHHHH-HHHHHHHHHCC------CGGGEEEEESSHHHHHHHHHHHHHHSC
T ss_pred CcCHHHHHHHhC--CCCCEEEEeeCCccHHHHHHH-HHHHHHHhcCC------ChhHEEEEeCcHHHHHHHHHHHHHhcC
Confidence 478999999975 245699999999999986443 33333333211 122599999999999999888877653
No 27
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=96.35 E-value=0.0034 Score=61.68 Aligned_cols=72 Identities=17% Similarity=0.274 Sum_probs=51.9
Q ss_pred CCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHh
Q 006737 401 QMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480 (633)
Q Consensus 401 ~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~ 480 (633)
.+++-|.+++... +..++|.|+.|||||.+.+- -+..++..... ++-++|++++|+.++..+...+.....
T Consensus 11 ~L~~eQ~~~v~~~--~g~~lV~g~aGSGKTt~l~~-ri~~ll~~~~~------~p~~il~lt~t~~aa~~~~~~~~~~~~ 81 (318)
T d1pjra1 11 HLNKEQQEAVRTT--EGPLLIMAGAGSGKTRVLTH-RIAYLMAEKHV------APWNILAITFTNKAAREMRERVQSLLG 81 (318)
T ss_dssp TSCHHHHHHHHCC--SSCEEEEECTTSCHHHHHHH-HHHHHHHTTCC------CGGGEEEEESSHHHHHHHHHHHHHHHG
T ss_pred hCCHHHHHHHhCC--CCCEEEEecCCccHHHHHHH-HHHHHHHcCCC------CHHHeEeEeccHHHHHHHHHHHHhhcc
Confidence 5889999999853 45699999999999986433 33333333211 112589999999999999988877654
Q ss_pred c
Q 006737 481 N 481 (633)
Q Consensus 481 ~ 481 (633)
.
T Consensus 82 ~ 82 (318)
T d1pjra1 82 G 82 (318)
T ss_dssp G
T ss_pred c
Confidence 3
No 28
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=95.85 E-value=0.016 Score=54.43 Aligned_cols=45 Identities=18% Similarity=0.255 Sum_probs=29.2
Q ss_pred CCeeEEEEecccccCCc-ChHHHHHHHHHHCC-CCCcEEEEeccCChh
Q 006737 533 MGLKMLVLDEADHLLDL-GFRKDVENIVDCLP-RRRQSLLFSATMPKE 578 (633)
Q Consensus 533 s~l~~LVIDEAD~Lld~-gf~~~l~~Il~~lp-k~~Q~IlfSATl~~e 578 (633)
...++||||++|.+... .....+..+++.+. ...++|+ |++.++.
T Consensus 96 ~~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iii-ts~~~p~ 142 (213)
T d1l8qa2 96 KSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIIL-ASDRHPQ 142 (213)
T ss_dssp HTCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEE-EESSCGG
T ss_pred hhccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEE-ecCCcch
Confidence 36778999999999753 24556667776554 3455555 5555444
No 29
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=95.55 E-value=0.012 Score=62.76 Aligned_cols=83 Identities=14% Similarity=0.243 Sum_probs=57.2
Q ss_pred CCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHH
Q 006737 399 YIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIAL 478 (633)
Q Consensus 399 ~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l 478 (633)
...+|+-|.+++.. ....++|.|..|||||.+.+--+ ..++....- ++=++|+|+.|+..|.++.+.+...
T Consensus 9 ~~~L~~eQ~~~v~~--~~~~~lV~A~AGSGKT~~lv~ri-~~ll~~~~~------~p~~Il~ltft~~Aa~ei~~Ri~~~ 79 (623)
T g1qhh.1 9 LAHLNKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRI-AYLMAEKHV------APWNILAITFTNKAAREMRERVQSL 79 (623)
T ss_dssp HTTSCHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHH-HHHHHTTCC------CGGGEEEEESSHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHcC--CCCCEEEEEeCchHHHHHHHHHH-HHHHHcCCC------CcccEEEEeccHHHHHHHHHHHHHh
Confidence 46789999999963 34578888999999998754333 333333211 1124899999999999999988876
Q ss_pred HhcC-CCceEEEE
Q 006737 479 LKNH-DGIGVLTL 490 (633)
Q Consensus 479 ~~~~-~~i~v~~l 490 (633)
+... .++.+.++
T Consensus 80 l~~~~~~~~v~Tf 92 (623)
T g1qhh.1 80 LGGAAEDVWISTF 92 (623)
T ss_dssp HGGGGTTSEEEEH
T ss_pred cccccCCCEEEcH
Confidence 5432 24555544
No 30
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=95.45 E-value=0.013 Score=54.68 Aligned_cols=40 Identities=20% Similarity=0.199 Sum_probs=27.2
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEe
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFS 572 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfS 572 (633)
....+++||||||.|... -...+.++++.-+++..+|+.+
T Consensus 106 ~~~~kviIide~d~l~~~-a~n~Llk~lEep~~~~~fIl~t 145 (207)
T d1a5ta2 106 LGGAKVVWVTDAALLTDA-AANALLKTLEEPPAETWFFLAT 145 (207)
T ss_dssp TSSCEEEEESCGGGBCHH-HHHHHHHHHTSCCTTEEEEEEE
T ss_pred cCccceEEechhhhhhhh-hhHHHHHHHHhhcccceeeeee
Confidence 456789999999999743 3556666666666555555444
No 31
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=94.85 E-value=0.25 Score=46.24 Aligned_cols=49 Identities=14% Similarity=0.109 Sum_probs=32.3
Q ss_pred cCccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhCC---CcEEEEccCCCCchhhhHHHHHHHHHH
Q 006737 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEG---KDAVVKAKTGTGKSIAFLLPAIEAVLK 443 (633)
Q Consensus 379 ~~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~g---rDvLv~ApTGSGKTlaylLPiL~~l~~ 443 (633)
++|+++-..+.+.+.|... +.++ +.+|++||+|+|||.+.. .++..+..
T Consensus 9 ~~~~dlig~~~~~~~L~~~---------------i~~~~~~~~~Ll~Gp~G~GKtt~a~-~~~~~l~~ 60 (239)
T d1njfa_ 9 QTFADVVGQEHVLTALANG---------------LSLGRIHHAYLFSGTRGVGKTSIAR-LLAKGLNC 60 (239)
T ss_dssp SSGGGSCSCHHHHHHHHHH---------------HHTTCCCSEEEEECSTTSSHHHHHH-HHHHHHHC
T ss_pred CCHHHccChHHHHHHHHHH---------------HHcCCCCeeEEEECCCCCcHHHHHH-HHHHHhcC
Confidence 4688887778777776542 2223 248999999999997643 34444443
No 32
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=94.72 E-value=0.02 Score=54.05 Aligned_cols=92 Identities=17% Similarity=0.187 Sum_probs=72.0
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHH---HHHHhcCCCcEEEECchhhHHHHhcccCcccccC
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD---QRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~---~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls 533 (633)
+|.||+|..+-+..+++.+.+++ +++++.+++|..+..+. ...+..+..+|||||. .++.+ +++.
T Consensus 33 Qvy~V~p~I~~~e~~~~~l~~~~---p~~~i~~lHGkm~~~eke~im~~F~~g~~~ILv~Tt-----vIEvG----iDvp 100 (211)
T d2eyqa5 33 QVYYLYNDVENIQKAAERLAELV---PEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTT-----IIETG----IDIP 100 (211)
T ss_dssp EEEEECCCSSCHHHHHHHHHHHC---TTSCEEECCSSCCHHHHHHHHHHHHTTSCCEEEESS-----TTGGG----SCCT
T ss_pred eEEEEEcCccchhhHHHHHHHhC---CceEEEEEEeccCHHHHHHHHHHHHcCCcceEEEeh-----hhhhc----cCCC
Confidence 79999999998888888877775 47899999998875543 3456677899999995 33443 7888
Q ss_pred CeeEEEEecccccCCcChHHHHHHHHHHCCC
Q 006737 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPR 564 (633)
Q Consensus 534 ~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk 564 (633)
+..++||..||++. ..++.++....-+
T Consensus 101 nA~~iiI~~a~rfG----LaQLhQLRGRVGR 127 (211)
T d2eyqa5 101 TANTIIIERADHFG----LAQLHQLRGRVGR 127 (211)
T ss_dssp TEEEEEETTTTSSC----HHHHHHHHTTCCB
T ss_pred CCcEEEEecchhcc----ccccccccceeee
Confidence 99999999999965 4577777766654
No 33
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=94.53 E-value=0.049 Score=51.07 Aligned_cols=46 Identities=15% Similarity=0.195 Sum_probs=26.5
Q ss_pred CCeeEEEEecccccCC-cChHHHHHHHHHHCCCCCcEEEEeccCChh
Q 006737 533 MGLKMLVLDEADHLLD-LGFRKDVENIVDCLPRRRQSLLFSATMPKE 578 (633)
Q Consensus 533 s~l~~LVIDEAD~Lld-~gf~~~l~~Il~~lpk~~Q~IlfSATl~~e 578 (633)
.+.++|+||=|=+... ......+..+....++..-+++++||...+
T Consensus 91 ~~~d~vlIDTaGr~~~d~~~~~el~~~~~~~~~~~~llv~~a~~~~~ 137 (207)
T d1ls1a2 91 EARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQE 137 (207)
T ss_dssp HTCCEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGTHH
T ss_pred ccCcceeecccccchhhhhhHHHHHHHHhhcCCceEEEEeccccchh
Confidence 3455666666655432 224455556666666555566777777665
No 34
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=94.36 E-value=0.066 Score=49.55 Aligned_cols=43 Identities=9% Similarity=0.132 Sum_probs=31.4
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccC
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl 575 (633)
....+++||||||.|... -...+.++++.-|++..+|++|...
T Consensus 77 ~~~~KviIId~ad~l~~~-aqNaLLK~LEEPp~~t~fiLit~~~ 119 (198)
T d2gnoa2 77 LYTRKYVIVHDCERMTQQ-AANAFLKALEEPPEYAVIVLNTRRW 119 (198)
T ss_dssp SSSSEEEEETTGGGBCHH-HHHHTHHHHHSCCTTEEEEEEESCG
T ss_pred cCCCEEEEEeCccccchh-hhhHHHHHHhCCCCCceeeeccCCh
Confidence 345679999999999643 5667777888777777777765543
No 35
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.08 E-value=0.025 Score=53.15 Aligned_cols=39 Identities=10% Similarity=0.217 Sum_probs=27.0
Q ss_pred CCeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEe
Q 006737 533 MGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFS 572 (633)
Q Consensus 533 s~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfS 572 (633)
....++||||+|.|... ....+..+++..+..+.+|+.+
T Consensus 130 ~~~~iiiide~d~l~~~-~~~~l~~~~e~~~~~~~~Il~t 168 (252)
T d1sxje2 130 HRYKCVIINEANSLTKD-AQAALRRTMEKYSKNIRLIMVC 168 (252)
T ss_dssp -CCEEEEEECTTSSCHH-HHHHHHHHHHHSTTTEEEEEEE
T ss_pred CCceEEEeccccccccc-cchhhhcccccccccccceeee
Confidence 35678999999998543 5556777888777666555543
No 36
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.05 E-value=0.068 Score=49.46 Aligned_cols=39 Identities=18% Similarity=0.436 Sum_probs=25.6
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEE
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLF 571 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~Ilf 571 (633)
.....+|||||+|.+... ....+..++...++...+++.
T Consensus 97 ~~~~kiiiiDe~d~~~~~-~~~~Ll~~le~~~~~~~~~~~ 135 (227)
T d1sxjc2 97 SKGFKLIILDEADAMTNA-AQNALRRVIERYTKNTRFCVL 135 (227)
T ss_dssp SCSCEEEEETTGGGSCHH-HHHHHHHHHHHTTTTEEEEEE
T ss_pred CCCeEEEEEeccccchhh-HHHHHHHHhhhcccceeeccc
Confidence 345568999999998754 455566667766655444433
No 37
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.94 E-value=0.13 Score=47.50 Aligned_cols=44 Identities=16% Similarity=0.179 Sum_probs=29.7
Q ss_pred CCeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCCh
Q 006737 533 MGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPK 577 (633)
Q Consensus 533 s~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~ 577 (633)
..-.+||+||+|.+... ....+...+...+..+.+++.+....+
T Consensus 100 ~~~kviiiDe~d~~~~~-~~~~ll~~~e~~~~~~~~i~~~~~~~~ 143 (224)
T d1sxjb2 100 GKHKIVILDEADSMTAG-AQQALRRTMELYSNSTRFAFACNQSNK 143 (224)
T ss_dssp TCCEEEEEESGGGSCHH-HHHTTHHHHHHTTTTEEEEEEESCGGG
T ss_pred cceEEEEEecccccchh-HHHHHhhhccccccceeeeeccCchhh
Confidence 34568999999998854 344555666666666767666655443
No 38
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=93.63 E-value=0.11 Score=47.24 Aligned_cols=77 Identities=17% Similarity=0.144 Sum_probs=61.6
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHH---HHHhcCCCcEEEECchhhHHHHhcccCcccccC
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ---RRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~---~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls 533 (633)
++||.|+|+.-|..+...+... ++.+..++|+.+..... ..+..+..+|||+|. ++.. .+++.
T Consensus 33 r~lvfc~t~~~~~~l~~~L~~~-----Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT~-----v~~~----GiDip 98 (174)
T d1c4oa2 33 RTLVTVLTVRMAEELTSFLVEH-----GIRARYLHHELDAFKRQALIRDLRLGHYDCLVGIN-----LLRE----GLDIP 98 (174)
T ss_dssp EEEEECSSHHHHHHHHHHHHHT-----TCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEESC-----CCCT----TCCCT
T ss_pred cEEEEEcchhHHHHHHHHHHhc-----CCceEEEecccchHHHHHHHHHHHCCCeEEEEeee-----eeee----eccCC
Confidence 6999999999999988887765 89999999998866543 466678899999994 3333 37889
Q ss_pred CeeEEEEecccccC
Q 006737 534 GLKMLVLDEADHLL 547 (633)
Q Consensus 534 ~l~~LVIDEAD~Ll 547 (633)
++.+||+=.++...
T Consensus 99 ~V~~Vi~~~~~~~~ 112 (174)
T d1c4oa2 99 EVSLVAILDADKEG 112 (174)
T ss_dssp TEEEEEETTTTSCS
T ss_pred CCcEEEEecccccc
Confidence 99999997777643
No 39
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=93.15 E-value=0.13 Score=49.05 Aligned_cols=52 Identities=12% Similarity=0.132 Sum_probs=30.2
Q ss_pred ccCccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHH--hCCCcEEEEccCCCCchhh
Q 006737 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSAC--LEGKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 378 ~~~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~i--l~grDvLv~ApTGSGKTla 432 (633)
..+|++++-.+.+.+.|.+. + .+ -.+.+.+..+ ..-+.+|+.||+|+|||+.
T Consensus 5 ~~~~~di~G~~~~k~~l~~~-i-~~-l~~~~~~~~~g~~~~~giLl~GppGtGKT~l 58 (247)
T d1ixza_ 5 KVTFKDVAGAEEAKEELKEI-V-EF-LKNPSRFHEMGARIPKGVLLVGPPGVGKTHL 58 (247)
T ss_dssp SCCGGGCCSCHHHHHHHHHH-H-HH-HHCHHHHHHTTCCCCSEEEEECCTTSSHHHH
T ss_pred CCcHHHHccHHHHHHHHHHH-H-HH-HHCHHHHHHcCCCCCceEEEecCCCCChhHH
Confidence 35799997777766666542 0 00 0011122221 1124699999999999984
No 40
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=92.98 E-value=0.053 Score=56.13 Aligned_cols=54 Identities=22% Similarity=0.388 Sum_probs=39.8
Q ss_pred HhCC-CcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHh
Q 006737 413 CLEG-KDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480 (633)
Q Consensus 413 il~g-rDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~ 480 (633)
+..| ++.++.|-||||||++. ..+ ...... .+|||+|+..+|.|+++.+..++.
T Consensus 27 l~~g~~~q~l~GltGS~ka~~i--A~l---~~~~~r---------p~LVVt~n~~~A~qL~~dL~~~l~ 81 (413)
T d1t5la1 27 LRRGVKHQTLLGATGTGKTFTI--SNV---IAQVNK---------PTLVIAHNKTLAGQLYSELKEFFP 81 (413)
T ss_dssp HHHTCSEEEEEECTTSCHHHHH--HHH---HHHHTC---------CEEEECSSHHHHHHHHHHHHHHCT
T ss_pred HhcCCCcEEEeCCCCcHHHHHH--HHH---HHHhCC---------CEEEEeCCHHHHHHHHHHHHHHcC
Confidence 3344 57899999999999743 222 222111 289999999999999999999874
No 41
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=92.88 E-value=0.071 Score=48.78 Aligned_cols=101 Identities=15% Similarity=0.144 Sum_probs=70.1
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHH---HHHhcCCCcEEEECchhhHHHHhcccCcccccC
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ---RRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~---~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls 533 (633)
++||.+++++-+..+...+... ++.+..++|+.+..... ..++.+..+|||||. ++.. .+++.
T Consensus 33 ~~iif~~~~~~~~~~~~~l~~~-----g~~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLVaTd-----v~~r----GiDip 98 (181)
T d1t5la2 33 RTLVTTLTKKMAEDLTDYLKEA-----GIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGIN-----LLRE----GLDIP 98 (181)
T ss_dssp EEEEECSSHHHHHHHHHHHHTT-----TCCEEEECSSCCHHHHHHHHHHHHHTSCSEEEESC-----CCSS----SCCCT
T ss_pred eEEEEeehhhhhHHHHHHHHhC-----CcceeEecCCccHHHHHHHHHHHHCCCCCEEEehh-----HHHc----cCCCC
Confidence 6999999999999887777654 88999999998866543 456668899999993 2333 37889
Q ss_pred CeeEEEEecccccCC-cChHHHHHHHHHHCCCCCcEEEE
Q 006737 534 GLKMLVLDEADHLLD-LGFRKDVENIVDCLPRRRQSLLF 571 (633)
Q Consensus 534 ~l~~LVIDEAD~Lld-~gf~~~l~~Il~~lpk~~Q~Ilf 571 (633)
++.+||.-++..... ..+...+.++-..-......+++
T Consensus 99 ~v~~VI~~d~p~~~~~~s~~~yi~R~GRagR~g~~~~~~ 137 (181)
T d1t5la2 99 EVSLVAILDADKEGFLRSERSLIQTIGRAARNANGHVIM 137 (181)
T ss_dssp TEEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTTCEEEE
T ss_pred CCCEEEEecCCcccccccHHHHHHHHHhhccccCceeEe
Confidence 999999988886432 22344444444433333333333
No 42
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=92.80 E-value=0.11 Score=48.48 Aligned_cols=18 Identities=28% Similarity=0.523 Sum_probs=14.6
Q ss_pred CCcEEEEccCCCCchhhh
Q 006737 416 GKDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 416 grDvLv~ApTGSGKTlay 433 (633)
++-+++++|||+|||.+.
T Consensus 6 ~~vi~lvGptGvGKTTTi 23 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTI 23 (207)
T ss_dssp SSEEEEECSTTSSHHHHH
T ss_pred CEEEEEECCCCCCHHHHH
Confidence 345788999999999863
No 43
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=92.42 E-value=0.21 Score=46.73 Aligned_cols=15 Identities=20% Similarity=0.426 Sum_probs=12.7
Q ss_pred EEEEccCCCCchhhh
Q 006737 419 AVVKAKTGTGKSIAF 433 (633)
Q Consensus 419 vLv~ApTGSGKTlay 433 (633)
+++++|||+|||.+.
T Consensus 12 i~lvGptGvGKTTTi 26 (211)
T d2qy9a2 12 ILMVGVNGVGKTTTI 26 (211)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 567999999999863
No 44
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=92.39 E-value=0.23 Score=46.49 Aligned_cols=16 Identities=31% Similarity=0.397 Sum_probs=13.3
Q ss_pred cEEEEccCCCCchhhh
Q 006737 418 DAVVKAKTGTGKSIAF 433 (633)
Q Consensus 418 DvLv~ApTGSGKTlay 433 (633)
-+++++|||+|||.+.
T Consensus 13 vi~lvGptGvGKTTTi 28 (213)
T d1vmaa2 13 VIMVVGVNGTGKTTSC 28 (213)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3678999999999863
No 45
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.34 E-value=0.22 Score=44.25 Aligned_cols=73 Identities=12% Similarity=0.245 Sum_probs=55.3
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHH---HHHhcCCCcEEEECchhhHHHHhcccCcccccC
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ---RRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~---~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls 533 (633)
++||.|.++.-+.++++.+... ++.+..++|+....... ..++.+...|||||. .+.+ .+++.
T Consensus 29 k~iIF~~s~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~r~~~l~~f~~~~~~iLv~Td-----v~~r----GiDi~ 94 (162)
T d1fuka_ 29 QAVIFCNTRRKVEELTTKLRND-----KFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTD-----LLAR----GIDVQ 94 (162)
T ss_dssp CEEEEESSHHHHHHHHHHHHHT-----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEEG-----GGTT----TCCCC
T ss_pred cEEEEEEEEchHHHHHHHHhhc-----CceEEEeccCCchhhHHHHHHHHhhcccceeeccc-----cccc----cccCC
Confidence 5999999999999998777654 77889999988766543 445567789999995 2333 37788
Q ss_pred CeeEEEEecc
Q 006737 534 GLKMLVLDEA 543 (633)
Q Consensus 534 ~l~~LVIDEA 543 (633)
++.+||.=+.
T Consensus 95 ~v~~VI~~d~ 104 (162)
T d1fuka_ 95 QVSLVINYDL 104 (162)
T ss_dssp SCSEEEESSC
T ss_pred CceEEEEecc
Confidence 8988887443
No 46
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=92.32 E-value=0.49 Score=43.45 Aligned_cols=42 Identities=21% Similarity=0.203 Sum_probs=28.6
Q ss_pred cCccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhhh
Q 006737 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 379 ~~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTlay 433 (633)
++|+++-..+.+.+.|... ++. -.-.++|++||+|+|||.+.
T Consensus 21 ~~~~diig~~~~~~~l~~~-------i~~------~~~~~lll~Gp~G~GKTtla 62 (231)
T d1iqpa2 21 QRLDDIVGQEHIVKRLKHY-------VKT------GSMPHLLFAGPPGVGKTTAA 62 (231)
T ss_dssp CSTTTCCSCHHHHHHHHHH-------HHH------TCCCEEEEESCTTSSHHHHH
T ss_pred CCHHHccCcHHHHHHHHHH-------HHc------CCCCeEEEECCCCCcHHHHH
Confidence 4578887777777776553 110 01247999999999999753
No 47
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.82 E-value=0.081 Score=48.92 Aligned_cols=38 Identities=18% Similarity=0.270 Sum_probs=23.4
Q ss_pred CeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEe
Q 006737 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFS 572 (633)
Q Consensus 534 ~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfS 572 (633)
...+|||||+|.+... ....+..++...+....+++.+
T Consensus 108 ~~~viiiDe~d~l~~~-~~~~l~~~~~~~~~~~~~i~~~ 145 (237)
T d1sxjd2 108 PYKIIILDEADSMTAD-AQSALRRTMETYSGVTRFCLIC 145 (237)
T ss_dssp SCEEEEETTGGGSCHH-HHHHHHHHHHHTTTTEEEEEEE
T ss_pred CceEEEEecccccCHH-HHHHHhhccccccccccccccc
Confidence 4568999999998754 3344555555555444444433
No 48
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.76 E-value=0.34 Score=43.17 Aligned_cols=73 Identities=10% Similarity=0.198 Sum_probs=56.0
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHH---HHHhcCCCcEEEECchhhHHHHhcccCcccccC
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ---RRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~---~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls 533 (633)
++||.|.++.-|..++..+... ++.+..++|+....... ..++.+..+|||||.- +.. .+++.
T Consensus 34 k~iVF~~~~~~~~~l~~~L~~~-----g~~~~~~h~~~~~~~r~~~~~~f~~~~~~ilv~Td~-----~~~----Gid~~ 99 (171)
T d1s2ma2 34 QAIIFCNSTNRVELLAKKITDL-----GYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDL-----LTR----GIDIQ 99 (171)
T ss_dssp EEEEECSSHHHHHHHHHHHHHH-----TCCEEEECTTSCHHHHHHHHHHHHTTSSSEEEESSC-----SSS----SCCCT
T ss_pred ceEEEEeeeehhhHhHHhhhcc-----cccccccccccchhhhhhhhhhcccCccccccchhH-----hhh----ccccc
Confidence 7999999999999988888776 78888999988765433 4555678899999963 222 37788
Q ss_pred CeeEEEEecc
Q 006737 534 GLKMLVLDEA 543 (633)
Q Consensus 534 ~l~~LVIDEA 543 (633)
.+.+||.=++
T Consensus 100 ~v~~VI~~d~ 109 (171)
T d1s2ma2 100 AVNVVINFDF 109 (171)
T ss_dssp TEEEEEESSC
T ss_pred eeEEEEecCC
Confidence 9998885444
No 49
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=91.74 E-value=0.13 Score=49.41 Aligned_cols=52 Identities=15% Similarity=0.155 Sum_probs=29.8
Q ss_pred ccCccccCCCHHHHHHHHHc--CCCCCcHHHHHHHHHHhCCCcEEEEccCCCCchhh
Q 006737 378 QKRFDECGISPLTIKALTAA--GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 378 ~~~F~el~L~~~Ll~~L~~~--g~~~pt~iQ~~aIp~il~grDvLv~ApTGSGKTla 432 (633)
..+|++.+-.+.+.+.|.+. -+..+..+|..- +-..+.+|+.||+|+|||+.
T Consensus 8 ~~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g---~~~~~~iLL~GppGtGKT~l 61 (256)
T d1lv7a_ 8 KTTFADVAGCDEAKEEVAELVEYLREPSRFQKLG---GKIPKGVLMVGPPGTGKTLL 61 (256)
T ss_dssp CCCGGGSCSCHHHHHHTHHHHHHHHCGGGC--------CCCCEEEEECCTTSCHHHH
T ss_pred CCCHHHHhchHHHHHHHHHHHHHHHCHHHHHHcC---CCCCCeEEeeCCCCCCccHH
Confidence 35689988777777666542 011111111110 11235799999999999984
No 50
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=91.50 E-value=0.38 Score=41.99 Aligned_cols=70 Identities=19% Similarity=0.323 Sum_probs=52.9
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHH---HHHhcCCCcEEEECchhhHHHHhcccCcccccC
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ---RRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~---~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls 533 (633)
++||.|++++-|.+++..+... ++.+..++|+....... ..+..+...|+|||. .+..+ +++.
T Consensus 30 k~IIF~~s~~~~~~l~~~L~~~-----g~~~~~~~~~~~~~~r~~~~~~f~~~~~~ilv~T~-----~~~~G----id~~ 95 (155)
T d1hv8a2 30 YGLVFCKTKRDTKELASMLRDI-----GFKAGAIHGDLSQSQREKVIRLFKQKKIRILIATD-----VMSRG----IDVN 95 (155)
T ss_dssp CEEEECSSHHHHHHHHHHHHHT-----TCCEEEECSSSCHHHHHHHHHHHHTTSSSEEEECT-----THHHH----CCCS
T ss_pred CEEEEECchHHHHHHHhhhccc-----ccccccccccchhhhhhhhhhhhhcccceeeeehh-----HHhhh----hhhc
Confidence 5999999999999988877764 77888999987655433 455567789999994 23333 6778
Q ss_pred CeeEEEE
Q 006737 534 GLKMLVL 540 (633)
Q Consensus 534 ~l~~LVI 540 (633)
.+.+||.
T Consensus 96 ~v~~Vi~ 102 (155)
T d1hv8a2 96 DLNCVIN 102 (155)
T ss_dssp CCSEEEE
T ss_pred cCcEEEE
Confidence 8888884
No 51
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=90.65 E-value=0.38 Score=44.28 Aligned_cols=70 Identities=24% Similarity=0.319 Sum_probs=53.0
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHH---HHHHhcCCCcEEEECchhhHHHHhcccCcccccC
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD---QRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~---~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls 533 (633)
++||.++|+..+..++..+... ++.+..++|+...... ...+..+..+|||+|. .+.. .+++.
T Consensus 32 ~~IIF~~t~~~~~~l~~~l~~~-----~~~~~~~h~~~~~~~r~~~~~~f~~g~~~ilvaTd-----~~~~----GiD~p 97 (200)
T d1oywa3 32 SGIIYCNSRAKVEDTAARLQSK-----GISAAAYHAGLENNVRADVQEKFQRDDLQIVVATV-----AFGM----GINKP 97 (200)
T ss_dssp CEEEECSSHHHHHHHHHHHHHT-----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEECT-----TSCT----TTCCT
T ss_pred CEEEEEeeehhhHHhhhhhccC-----CceeEEecCCCcHHHHHHHHHHHhcccceEEEecc-----hhhh----ccCCC
Confidence 5999999999999988777654 7889999999876543 3455667889999994 2222 36778
Q ss_pred CeeEEEE
Q 006737 534 GLKMLVL 540 (633)
Q Consensus 534 ~l~~LVI 540 (633)
+|++||.
T Consensus 98 ~v~~VI~ 104 (200)
T d1oywa3 98 NVRFVVH 104 (200)
T ss_dssp TCCEEEE
T ss_pred CCCEEEE
Confidence 8888874
No 52
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=90.28 E-value=0.53 Score=44.52 Aligned_cols=16 Identities=13% Similarity=0.275 Sum_probs=14.1
Q ss_pred CcEEEEccCCCCchhh
Q 006737 417 KDAVVKAKTGTGKSIA 432 (633)
Q Consensus 417 rDvLv~ApTGSGKTla 432 (633)
+.+|+.||+|+|||+.
T Consensus 41 ~~vLL~GppGtGKT~l 56 (246)
T d1d2na_ 41 VSVLLEGPPHSGKTAL 56 (246)
T ss_dssp EEEEEECSTTSSHHHH
T ss_pred eEEEEECcCCCCHHHH
Confidence 3699999999999974
No 53
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=90.16 E-value=0.19 Score=49.93 Aligned_cols=65 Identities=15% Similarity=0.268 Sum_probs=37.5
Q ss_pred HHHHHHcCCCC---CcHHHHHHHHH-HhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHH
Q 006737 391 IKALTAAGYIQ---MTRVQEATLSA-CLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRE 466 (633)
Q Consensus 391 l~~L~~~g~~~---pt~iQ~~aIp~-il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTRe 466 (633)
+..+...|+-. ..+-+...+.. +..+++++|+|+||||||.. +-+ +...-.. .-++++|--+.|
T Consensus 137 l~~l~~~g~~~~~~~~~~~~~~l~~~v~~~~nili~G~tgSGKTT~--l~a---l~~~i~~-------~~rivtiEd~~E 204 (323)
T d1g6oa_ 137 HSFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGKTTY--IKS---IMEFIPK-------EERIISIEDTEE 204 (323)
T ss_dssp HHHHHHTTTTTTCSSHHHHHHHHHHHHHHTCCEEEEESTTSSHHHH--HHH---HGGGSCT-------TCCEEEEESSCC
T ss_pred hHHHHHHhhhcccccHHHHHHHHHHHHHhCCCEEEEeeccccchHH--HHH---Hhhhccc-------ccceeeccchhh
Confidence 34445555433 23444444444 45678999999999999983 222 2222111 124777777777
Q ss_pred H
Q 006737 467 L 467 (633)
Q Consensus 467 L 467 (633)
|
T Consensus 205 l 205 (323)
T d1g6oa_ 205 I 205 (323)
T ss_dssp C
T ss_pred h
Confidence 6
No 54
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.03 E-value=0.33 Score=43.19 Aligned_cols=73 Identities=12% Similarity=0.123 Sum_probs=53.6
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHH---HHHhcCCCcEEEECchhhHHHHhcccCcccccC
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ---RRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~---~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls 533 (633)
++||.|+++.-+..+.+.+.+. ++.+..++|+.+..... ..+..+.++|||+|.- +.. .+++.
T Consensus 29 k~iIF~~~~~~~~~l~~~L~~~-----~~~~~~ihg~~~~~~r~~~l~~F~~g~~~iLv~T~~-----~~~----Gid~~ 94 (168)
T d1t5ia_ 29 QVVIFVKSVQRCIALAQLLVEQ-----NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNL-----FGR----GMDIE 94 (168)
T ss_dssp SEEEECSSHHHHHHHHHHHHHT-----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEESSC-----CST----TCCGG
T ss_pred eEEEEEeeeecchhhhhhhccc-----cccccccccccchhhhhhhhhhhccccceeeecccc-----ccc----hhhcc
Confidence 5999999999999888777654 77889999998766543 4456678899999942 222 36677
Q ss_pred CeeEEEEecc
Q 006737 534 GLKMLVLDEA 543 (633)
Q Consensus 534 ~l~~LVIDEA 543 (633)
.+.+||+=+.
T Consensus 95 ~~~~vi~~~~ 104 (168)
T d1t5ia_ 95 RVNIAFNYDM 104 (168)
T ss_dssp GCSEEEESSC
T ss_pred cchhhhhhhc
Confidence 7877766543
No 55
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=89.96 E-value=0.23 Score=45.88 Aligned_cols=43 Identities=19% Similarity=0.169 Sum_probs=25.3
Q ss_pred CCeeEEEEecccccCCcC----hHHHHHHHHHHCCCCCcEEEEeccC
Q 006737 533 MGLKMLVLDEADHLLDLG----FRKDVENIVDCLPRRRQSLLFSATM 575 (633)
Q Consensus 533 s~l~~LVIDEAD~Lld~g----f~~~l~~Il~~lpk~~Q~IlfSATl 575 (633)
..++++|||-++.+.... ....+..+...+.....++++.++.
T Consensus 115 ~~~~~vviDs~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~ 161 (242)
T d1tf7a2 115 FKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTS 161 (242)
T ss_dssp TCCSEEEEECHHHHTSSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred cCCceeeeecchhhhcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEee
Confidence 357899999999887543 2333334444444444566665544
No 56
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.47 E-value=0.61 Score=41.45 Aligned_cols=71 Identities=13% Similarity=0.246 Sum_probs=54.0
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHH---HHHhcCCCcEEEECchhhHHHHhcccCcccccC
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ---RRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~---~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls 533 (633)
++||.|.++.-|..++..+... ++.+..++|+....... ..++.+..+|||||- .+.+ .+++.
T Consensus 36 k~iiF~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~r~~~~~~fk~g~~~iLv~Td-----~~~r----GiDi~ 101 (168)
T d2j0sa2 36 QAVIFCNTKRKVDWLTEKMREA-----NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTD-----VWAR----GLDVP 101 (168)
T ss_dssp EEEEECSSHHHHHHHHHHHHHT-----TCCCEEECTTSCHHHHHHHHHHHHHTSSCEEEECG-----GGSS----SCCCT
T ss_pred ceEEEeeeHHHHHHHHHHhhhc-----ccchhhhhhhhhHHHHHHHHHHHhcCCccEEeccc-----hhcc----ccccc
Confidence 6999999999999988777765 67788899988766543 345567789999994 3333 37788
Q ss_pred CeeEEEEe
Q 006737 534 GLKMLVLD 541 (633)
Q Consensus 534 ~l~~LVID 541 (633)
++++||.=
T Consensus 102 ~v~~VIn~ 109 (168)
T d2j0sa2 102 QVSLIINY 109 (168)
T ss_dssp TEEEEEES
T ss_pred CcceEEEe
Confidence 89888753
No 57
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=89.18 E-value=0.03 Score=49.53 Aligned_cols=43 Identities=9% Similarity=0.106 Sum_probs=27.0
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccC
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl 575 (633)
....+++++||++..... -...+..+...+.....+++++...
T Consensus 97 ~~~~~vlllDE~~~~~~~-~~~~~~~l~~~l~~~~~~il~~~h~ 139 (178)
T d1ye8a1 97 KDRRKVIIIDEIGKMELF-SKKFRDLVRQIMHDPNVNVVATIPI 139 (178)
T ss_dssp HCTTCEEEECCCSTTGGG-CHHHHHHHHHHHTCTTSEEEEECCS
T ss_pred hcCCCceeecCCCccchh-hHHHHHHHHHHhccCCCEEEEEEcc
Confidence 457789999999765533 2344445555555555677776543
No 58
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.00 E-value=0.55 Score=41.74 Aligned_cols=70 Identities=21% Similarity=0.305 Sum_probs=53.6
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHH---HHHhcCCCcEEEECchhhHHHHhcccCcccccC
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ---RRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~---~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls 533 (633)
++||.+.+++-+..++..+... ++.+..++|+....... ..+..+...|+|||.- +.+ .+++.
T Consensus 34 ~~lIF~~~~~~~~~l~~~l~~~-----~~~~~~~hg~~~~~~R~~~~~~F~~g~~~ilv~Td~-----~~~----Gid~~ 99 (168)
T d2rb4a1 34 QAIIFCQTRRNAKWLTVEMIQD-----GHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNV-----CAR----GIDVK 99 (168)
T ss_dssp EEEEECSCHHHHHHHHHHHHTT-----TCCEEEECSSCCHHHHHHHHHHHHTTSCSEEEECCS-----CCT----TTCCT
T ss_pred cEEEEcCHHHHHHHHHHHHHhc-----CCcceecccchhhHHHHHHhhhhcCCceeeeechhh-----hhh----hhccc
Confidence 6999999999999988766543 78899999998866543 4556677899999953 222 37788
Q ss_pred CeeEEEE
Q 006737 534 GLKMLVL 540 (633)
Q Consensus 534 ~l~~LVI 540 (633)
.+.+||.
T Consensus 100 ~v~~Vi~ 106 (168)
T d2rb4a1 100 QVTIVVN 106 (168)
T ss_dssp TEEEEEE
T ss_pred cccEEEe
Confidence 8988876
No 59
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=88.47 E-value=1 Score=41.80 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=8.8
Q ss_pred EEEEccCCCCchhhh
Q 006737 419 AVVKAKTGTGKSIAF 433 (633)
Q Consensus 419 vLv~ApTGSGKTlay 433 (633)
+++++|||+|||.+.
T Consensus 15 i~lvGptGvGKTTTi 29 (211)
T d1j8yf2 15 IMLVGVQGTGKATTA 29 (211)
T ss_dssp EEEECSCCC----HH
T ss_pred EEEECCCCCCHHHHH
Confidence 567899999999863
No 60
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=86.84 E-value=0.3 Score=42.43 Aligned_cols=50 Identities=28% Similarity=0.480 Sum_probs=41.2
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECc
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTP 515 (633)
++||.|+|+.-|.++++.+..+ ++.+..++++..... .+.+..+|||||.
T Consensus 37 k~IVFc~t~~~ae~la~~L~~~-----G~~~~~~H~~~~~~~----~~~~~~~vlvaTd 86 (138)
T d1jr6a_ 37 RHLIFCHSKKKCDELAAKLVAL-----GINAVAYYRGLDVSV----IPTNGDVVVVATD 86 (138)
T ss_dssp CEEEECSCHHHHHHHHHHHHHH-----TCEEEEECTTCCSCC----CTTSSCEEEEESS
T ss_pred CEEEEeCcHHHHHHHHHHHhcc-----ccchhhhhccchhhh----hhhhhcceeehhH
Confidence 4899999999999999888776 788999999877543 3456689999994
No 61
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=84.63 E-value=0.41 Score=46.99 Aligned_cols=53 Identities=19% Similarity=0.123 Sum_probs=38.3
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECc
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTP 515 (633)
++||+||+..-+.++...+.+. +..|.+++|.+.... ...++.+..+|||+|.
T Consensus 38 ~~~~F~~s~~~~~~~a~~L~~~-----g~~V~~l~~~~~~~e-~~~~~~~~~~~~~~t~ 90 (299)
T d1yksa2 38 PTAWFLPSIRAANVMAASLRKA-----GKSVVVLNRKTFERE-YPTIKQKKPDFILATD 90 (299)
T ss_dssp CEEEECSCHHHHHHHHHHHHHT-----TCCEEECCSSSCC---------CCCSEEEESS
T ss_pred CEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEcCcCcHhH-HhhhhcCCcCEEEEec
Confidence 4899999999999998888764 667889999877554 4556677789999994
No 62
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.22 E-value=1.2 Score=42.03 Aligned_cols=16 Identities=25% Similarity=0.540 Sum_probs=14.3
Q ss_pred CcEEEEccCCCCchhh
Q 006737 417 KDAVVKAKTGTGKSIA 432 (633)
Q Consensus 417 rDvLv~ApTGSGKTla 432 (633)
+.+|+.||+|+|||+.
T Consensus 39 ~giLL~GppGtGKT~l 54 (258)
T d1e32a2 39 RGILLYGPPGTGKTLI 54 (258)
T ss_dssp CEEEEECCTTSSHHHH
T ss_pred ceeEEecCCCCCchHH
Confidence 5799999999999973
No 63
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=82.78 E-value=0.46 Score=47.86 Aligned_cols=28 Identities=32% Similarity=0.350 Sum_probs=20.0
Q ss_pred CCCcEEEEccCCCCchhhhHHHHHHHHHH
Q 006737 415 EGKDAVVKAKTGTGKSIAFLLPAIEAVLK 443 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTlaylLPiL~~l~~ 443 (633)
..++++|.|+||||||.+. ..++..+..
T Consensus 49 ~~~H~~I~G~tGsGKT~~l-~~li~~~~~ 76 (433)
T d1e9ra_ 49 EPRHLLVNGATGTGKSVLL-RELAYTGLL 76 (433)
T ss_dssp GGGCEEEEECTTSSHHHHH-HHHHHHHHH
T ss_pred ccceEEEEeCCCCcHHHHH-HHHHHHHHh
Confidence 3568999999999999764 334444443
No 64
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.61 E-value=0.63 Score=39.92 Aligned_cols=26 Identities=19% Similarity=0.331 Sum_probs=18.5
Q ss_pred CcEEEEccCCCCchhhhHHHHHHHHHH
Q 006737 417 KDAVVKAKTGTGKSIAFLLPAIEAVLK 443 (633)
Q Consensus 417 rDvLv~ApTGSGKTlaylLPiL~~l~~ 443 (633)
|++++.||+|+|||.. +--++..+..
T Consensus 2 k~v~ItG~~GtGKTtl-~~~i~~~l~~ 27 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTL-IHKASEVLKS 27 (189)
T ss_dssp CCEEEESCCSSCHHHH-HHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHH-HHHHHHHHHH
Confidence 6899999999999983 3334444433
No 65
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=82.41 E-value=0.78 Score=46.82 Aligned_cols=55 Identities=33% Similarity=0.492 Sum_probs=39.6
Q ss_pred HHhCCC-cEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHh
Q 006737 412 ACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480 (633)
Q Consensus 412 ~il~gr-DvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~ 480 (633)
.+..|. .+.+.|-|||+|+++ +..+ ...... .+|||+|+...|.++++.+..++.
T Consensus 23 ~L~~g~~~~~L~GlsgS~ka~~--~A~l---~~~~~r---------p~LvVt~~~~~A~~l~~dL~~~l~ 78 (408)
T d1c4oa1 23 ALRDGERFVTLLGATGTGKTVT--MAKV---IEALGR---------PALVLAPNKILAAQLAAEFRELFP 78 (408)
T ss_dssp HHHTTCSEEEEEECTTSCHHHH--HHHH---HHHHTC---------CEEEEESSHHHHHHHHHHHHHHCT
T ss_pred HHhcCCCcEEEecCCCCHHHHH--HHHH---HHHhCC---------CEEEEeCCHHHHHHHHHHHHHhcC
Confidence 344554 578899999999973 3333 222111 178999999999999999998864
No 66
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=81.19 E-value=3.2 Score=39.20 Aligned_cols=70 Identities=21% Similarity=0.299 Sum_probs=49.7
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccch-----------HHHHHHhcCCCcEEEECchhhHHHHhcc
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK-----------VDQRRLESDPCQILVATPGRLLDHIENK 525 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~-----------~~~~~l~~~~~dILIaTPgrLl~lL~~~ 525 (633)
++||.+.+++-+..+++.+.+. ++.+..+.|..... .....+..+.++|||+|- .+..
T Consensus 163 k~iiF~~~~~~~~~~~~~L~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~g~~~vLv~T~-----~~~~- 231 (286)
T d1wp9a2 163 KIIVFTNYRETAKKIVNELVKD-----GIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFNVLVATS-----VGEE- 231 (286)
T ss_dssp CEEEECSCHHHHHHHHHHHHHT-----TCCEEEECCSSCC-------CCHHHHHHHHHHHTSCSEEEECG-----GGGG-
T ss_pred cEEEEeCcHHhHHHHHHHHHHc-----CCceEEeeccccccccchhchHHHHHHHHHHHcCCCcEEEEcc-----ceec-
Confidence 6999999999999888776653 67777777753322 123455667789999993 2333
Q ss_pred cCcccccCCeeEEEE
Q 006737 526 SGLSVRLMGLKMLVL 540 (633)
Q Consensus 526 ~~~~~~Ls~l~~LVI 540 (633)
.+++..+.+||+
T Consensus 232 ---Gld~~~~~~Vi~ 243 (286)
T d1wp9a2 232 ---GLDVPEVDLVVF 243 (286)
T ss_dssp ---GGGSTTCCEEEE
T ss_pred ---cccCCCCCEEEE
Confidence 378889998886
No 67
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=81.10 E-value=2.7 Score=38.19 Aligned_cols=30 Identities=30% Similarity=0.369 Sum_probs=20.2
Q ss_pred CeeEEEEecccccCCcC---hHHHHHHHHHHCC
Q 006737 534 GLKMLVLDEADHLLDLG---FRKDVENIVDCLP 563 (633)
Q Consensus 534 ~l~~LVIDEAD~Lld~g---f~~~l~~Il~~lp 563 (633)
.--++|+||+|.+.+.. +...+..+....+
T Consensus 136 ~~~~i~id~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (283)
T d2fnaa2 136 DNVIIVLDEAQELVKLRGVNLLPALAYAYDNLK 168 (283)
T ss_dssp SCEEEEEETGGGGGGCTTCCCHHHHHHHHHHCT
T ss_pred cccccccchhhhhcccchHHHHHHHHHHHHhhh
Confidence 34578999999987543 5666666665543
No 68
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=80.95 E-value=2.1 Score=40.98 Aligned_cols=40 Identities=23% Similarity=0.373 Sum_probs=24.4
Q ss_pred EEEEecccccCCcC----hHHHHHHHHH-HCCC-CCcEEEEeccCChh
Q 006737 537 MLVLDEADHLLDLG----FRKDVENIVD-CLPR-RRQSLLFSATMPKE 578 (633)
Q Consensus 537 ~LVIDEAD~Lld~g----f~~~l~~Il~-~lpk-~~Q~IlfSATl~~e 578 (633)
+++|||+|.|+..| -...+..++. .+.. +.|+|+ ||=+.+
T Consensus 113 IlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~rg~i~vIg--atT~ee 158 (268)
T d1r6bx2 113 ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIG--STTYQE 158 (268)
T ss_dssp EEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSSCCCEEEE--EECHHH
T ss_pred eEEecchHHHhcCCCCCCccccHHHHhhHHHhCCCCeEEE--eCCHHH
Confidence 68899999998643 2345556655 3332 455555 555555
No 69
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=79.77 E-value=0.8 Score=46.45 Aligned_cols=37 Identities=16% Similarity=0.300 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhCCC--cEEEEccCCCCchhhhHHHHHHHH
Q 006737 404 RVQEATLSACLEGK--DAVVKAKTGTGKSIAFLLPAIEAV 441 (633)
Q Consensus 404 ~iQ~~aIp~il~gr--DvLv~ApTGSGKTlaylLPiL~~l 441 (633)
+.|.+.+..++... =+|++||||||||... ..+++.+
T Consensus 144 ~~~~~~l~~l~~~~~GliLvtGpTGSGKSTTl-~~~l~~~ 182 (401)
T d1p9ra_ 144 AHNHDNFRRLIKRPHGIILVTGPTGSGKSTTL-YAGLQEL 182 (401)
T ss_dssp HHHHHHHHHHHTSSSEEEEEECSTTSCHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHhhhhceEEEEcCCCCCccHHH-HHHhhhh
Confidence 44444444444433 5889999999999863 3355555
No 70
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=78.18 E-value=0.46 Score=46.43 Aligned_cols=18 Identities=28% Similarity=0.349 Sum_probs=15.7
Q ss_pred CCcEEEEccCCCCchhhh
Q 006737 416 GKDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 416 grDvLv~ApTGSGKTlay 433 (633)
.+.++++||||+|||+..
T Consensus 49 ~~~iLl~GPpG~GKT~lA 66 (309)
T d1ofha_ 49 PKNILMIGPTGVGKTEIA 66 (309)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred CceEEEECCCCCCHHHHH
Confidence 578999999999999843
No 71
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=78.13 E-value=0.35 Score=50.11 Aligned_cols=17 Identities=29% Similarity=0.415 Sum_probs=15.3
Q ss_pred CCcEEEEccCCCCchhh
Q 006737 416 GKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 416 grDvLv~ApTGSGKTla 432 (633)
.+|+|+.||||+|||+.
T Consensus 49 ksNILliGPTGvGKTlL 65 (443)
T d1g41a_ 49 PKNILMIGPTGVGKTEI 65 (443)
T ss_dssp CCCEEEECCTTSSHHHH
T ss_pred cccEEEECCCCCCHHHH
Confidence 46999999999999984
No 72
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=77.42 E-value=1.9 Score=43.44 Aligned_cols=16 Identities=25% Similarity=0.511 Sum_probs=14.2
Q ss_pred CcEEEEccCCCCchhh
Q 006737 417 KDAVVKAKTGTGKSIA 432 (633)
Q Consensus 417 rDvLv~ApTGSGKTla 432 (633)
.|+|++|+.|.|||..
T Consensus 44 ~n~llvG~~GvGKtai 59 (387)
T d1qvra2 44 NNPVLIGEPGVGKTAI 59 (387)
T ss_dssp CCCEEEECTTSCHHHH
T ss_pred CCCeEECCCCCCHHHH
Confidence 4899999999999974
No 73
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=76.68 E-value=1.3 Score=40.62 Aligned_cols=43 Identities=21% Similarity=0.114 Sum_probs=27.6
Q ss_pred cCccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhC----CCcEEEEccCCCCchhhh
Q 006737 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLE----GKDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 379 ~~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~----grDvLv~ApTGSGKTlay 433 (633)
++|+++--.+.+.+.|... +..... -.++|++||+|+|||.+.
T Consensus 6 ~~~ddivGq~~~~~~L~~~------------i~~~~~~~~~~~~~Ll~GPpG~GKTtla 52 (239)
T d1ixsb2 6 KTLDEYIGQERLKQKLRVY------------LEAAKARKEPLEHLLLFGPPGLGKTTLA 52 (239)
T ss_dssp CSGGGSCSCHHHHHHHHHH------------HHHHTTSSSCCCCEEEECCTTSCHHHHH
T ss_pred CCHHHhCCHHHHHHHHHHH------------HHHHHhcCCCCCeEEEECCCCCCHHHHH
Confidence 3578875566666665432 122222 247999999999999743
No 74
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=75.94 E-value=4.1 Score=36.79 Aligned_cols=74 Identities=22% Similarity=0.194 Sum_probs=47.5
Q ss_pred EEEEcccHHHHHHHHHHHHHHHhcCCC-------------------------ceEEEEECCccchHH---HHHHhcCCCc
Q 006737 458 VLILCPTRELASQIAAEAIALLKNHDG-------------------------IGVLTLVGGTRFKVD---QRRLESDPCQ 509 (633)
Q Consensus 458 vLILvPTReLa~Qi~~~l~~l~~~~~~-------------------------i~v~~l~Gg~~~~~~---~~~l~~~~~d 509 (633)
+||.||||..|..++..+......... ..|++.+++...... ...+..+..+
T Consensus 43 ~LVF~~sRk~~~~~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GIa~hh~~l~~~~r~~ie~~f~~g~i~ 122 (201)
T d2p6ra4 43 VLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLNGQRRVVEDAFRRGNIK 122 (201)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHTTCCCSSHHHHHHTTCCSHHHHHHHHHHHTTCCEECTTSCHHHHHHHHHHHHTTSCC
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhhhhhHHHHHHHhccHHHHHHHhhhhhHHHHHHHHhCCCce
Confidence 899999998888877777665432110 126677888765542 2345667889
Q ss_pred EEEECchhhHHHHhcccCcccccCCeeEEEE
Q 006737 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVL 540 (633)
Q Consensus 510 ILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVI 540 (633)
|||||..- .. .+++....+||.
T Consensus 123 vlvaT~~l-----~~----Gin~p~~~vvi~ 144 (201)
T d2p6ra4 123 VVVATPTL-----AA----GVNLPARRVIVR 144 (201)
T ss_dssp EEEECSTT-----TS----SSCCCBSEEEEC
T ss_pred EEEechHH-----Hh----hcCCCCceEEEe
Confidence 99999532 11 356666665554
No 75
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=75.89 E-value=1.9 Score=43.00 Aligned_cols=63 Identities=14% Similarity=0.206 Sum_probs=40.1
Q ss_pred CcEEEEccCCCCchhhhHHHHHHHHHHhcCCC-CCCCCCCeEEEEEcccHHHHHHHHHHHHHHH
Q 006737 417 KDAVVKAKTGTGKSIAFLLPAIEAVLKATSSS-TTQLVPPIYVLILCPTRELASQIAAEAIALL 479 (633)
Q Consensus 417 rDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~-~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~ 479 (633)
..+||.|.-|||||.+..-=++..|+...... ......+=.+|+|+=|+..|.++.+++...+
T Consensus 17 g~~lv~A~AGsGKT~~l~~r~~~ll~~~~~~~~~~~~~~~~~IL~lTFT~kAA~Emk~RI~~~L 80 (485)
T d1w36b1 17 GERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNI 80 (485)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHHHHTTCSSSSSCSSCCCGGGEEEEESCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEcCchHHHHHHHHHHHHHHhhCcccccccCCCCcccEeEeccHHHHHHHHHHHHHHHH
Confidence 36899999999999864444444443322110 0111222248999999999999888776554
No 76
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=75.86 E-value=3.3 Score=36.76 Aligned_cols=18 Identities=33% Similarity=0.667 Sum_probs=15.5
Q ss_pred CCCcEEEEccCCCCchhh
Q 006737 415 EGKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTla 432 (633)
.|.-+++.|++|+|||..
T Consensus 25 ~G~~~~I~G~~G~GKT~l 42 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLF 42 (242)
T ss_dssp TTSEEEEEESTTSSHHHH
T ss_pred CCeEEEEEeCCCCCHHHH
Confidence 467899999999999964
No 77
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=75.66 E-value=1.8 Score=39.45 Aligned_cols=44 Identities=23% Similarity=0.200 Sum_probs=28.5
Q ss_pred cCccccCCCHHHHHHHHHcCCCCCcHHHHHHHHHHhC---CCcEEEEccCCCCchhhh
Q 006737 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLE---GKDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 379 ~~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~il~---grDvLv~ApTGSGKTlay 433 (633)
++|+++--.+.+++.|... ++. .... ..++|++||+|+|||.+.
T Consensus 6 ~~~~divGqe~~~~~l~~~-------i~~----~~~~~~~~~~~L~~GPpGtGKT~lA 52 (238)
T d1in4a2 6 KSLDEFIGQENVKKKLSLA-------LEA----AKMRGEVLDHVLLAGPPGLGKTTLA 52 (238)
T ss_dssp SSGGGCCSCHHHHHHHHHH-------HHH----HHHHTCCCCCEEEESSTTSSHHHHH
T ss_pred CcHHHcCChHHHHHHHHHH-------HHH----HHhcCCCCCeEEEECCCCCcHHHHH
Confidence 4688887677777666532 110 1111 247999999999999853
No 78
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=74.14 E-value=5.6 Score=33.90 Aligned_cols=101 Identities=19% Similarity=0.179 Sum_probs=54.1
Q ss_pred EEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchH
Q 006737 419 AVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498 (633)
Q Consensus 419 vLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~ 498 (633)
-++.||=.||||.- +|-.+....... -+++++-|...-= +...+ .. +.|..
T Consensus 5 ~~i~GpMfsGKTte-Li~~~~~~~~~~----------~kv~~ikp~~D~R------------~~~~i--~s-~~g~~--- 55 (139)
T d2b8ta1 5 EFITGPMFAGKTAE-LIRRLHRLEYAD----------VKYLVFKPKIDTR------------SIRNI--QS-RTGTS--- 55 (139)
T ss_dssp EEEECSTTSCHHHH-HHHHHHHHHHTT----------CCEEEEEECCCGG------------GCSSC--CC-CCCCS---
T ss_pred EEEEccccCHHHHH-HHHHHHHHHHCC----------CcEEEEEEccccc------------ccceE--Ec-ccCce---
Confidence 36789999999974 343444333222 2488888874310 00011 00 01111
Q ss_pred HHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEEEEecccccCCcChHHHHHHHHHHC
Q 006737 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562 (633)
Q Consensus 499 ~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~l 562 (633)
-..+.|.+...+...+... ....++++|.||||+-+.+ -...+..++...
T Consensus 56 --------~~~~~~~~~~~~~~~~~~~----~~~~~~dvI~IDE~QFf~d--~i~~~~~~~~~~ 105 (139)
T d2b8ta1 56 --------LPSVEVESAPEILNYIMSN----SFNDETKVIGIDEVQFFDD--RICEVANILAEN 105 (139)
T ss_dssp --------SCCEEESSTHHHHHHHHST----TSCTTCCEEEECSGGGSCT--HHHHHHHHHHHT
T ss_pred --------eeeEEeccchhhHHHHHhh----ccccCcCEEEechhhhcch--hHHHHHHHHHhc
Confidence 1235566666666666543 2245789999999998753 233444444433
No 79
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=73.80 E-value=1.1 Score=44.92 Aligned_cols=17 Identities=24% Similarity=0.483 Sum_probs=14.9
Q ss_pred CcEEEEccCCCCchhhh
Q 006737 417 KDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 417 rDvLv~ApTGSGKTlay 433 (633)
.++|++||||+|||...
T Consensus 69 ~niLfiGPTGvGKTElA 85 (364)
T d1um8a_ 69 SNILLIGPTGSGKTLMA 85 (364)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred cceeeeCCCCccHHHHH
Confidence 58999999999999743
No 80
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=73.03 E-value=19 Score=32.41 Aligned_cols=37 Identities=11% Similarity=0.092 Sum_probs=25.9
Q ss_pred cCCCcEE-EECchhhHHHHhcccCcccccCCeeEEEEeccc
Q 006737 505 SDPCQIL-VATPGRLLDHIENKSGLSVRLMGLKMLVLDEAD 544 (633)
Q Consensus 505 ~~~~dIL-IaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDEAD 544 (633)
.+...|| -+||+.+..++..+. ...+.+..|.|+|-+
T Consensus 149 rg~l~~IgatT~eey~~~~e~d~---aL~rrF~~I~V~Ep~ 186 (195)
T d1jbka_ 149 RGELHCVGATTLDEYRQYIEKDA---ALERRFQKVFVAEPS 186 (195)
T ss_dssp TTSCCEEEEECHHHHHHHTTTCH---HHHTTEEEEECCCCC
T ss_pred CCCceEEecCCHHHHHHHHHcCH---HHHhcCCEeecCCCC
Confidence 3445544 578999998887763 335678888888864
No 81
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=71.33 E-value=0.9 Score=37.97 Aligned_cols=19 Identities=21% Similarity=0.228 Sum_probs=16.0
Q ss_pred CCcEEEEccCCCCchhhhH
Q 006737 416 GKDAVVKAKTGTGKSIAFL 434 (633)
Q Consensus 416 grDvLv~ApTGSGKTlayl 434 (633)
.+++++.|+.|+|||....
T Consensus 2 ~k~I~l~G~~GsGKSTvak 20 (169)
T d1kaga_ 2 KRNIFLVGPMGAGKSTIGR 20 (169)
T ss_dssp CCCEEEECCTTSCHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHH
Confidence 3689999999999998544
No 82
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=70.78 E-value=0.91 Score=41.63 Aligned_cols=16 Identities=31% Similarity=0.596 Sum_probs=14.5
Q ss_pred CcEEEEccCCCCchhh
Q 006737 417 KDAVVKAKTGTGKSIA 432 (633)
Q Consensus 417 rDvLv~ApTGSGKTla 432 (633)
.++++.||+|+|||.+
T Consensus 44 ~~lll~GppGtGKT~l 59 (276)
T d1fnna2 44 PRATLLGRPGTGKTVT 59 (276)
T ss_dssp CEEEEECCTTSSHHHH
T ss_pred CceEEECCCCCCHHHH
Confidence 5899999999999974
No 83
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=69.47 E-value=2.3 Score=38.93 Aligned_cols=54 Identities=11% Similarity=0.078 Sum_probs=30.6
Q ss_pred cCccccCCCHHHHHHHHHcCCCCCcHHHHHHHHH-----HhCCCcEEEEccCCCCchhhh
Q 006737 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSA-----CLEGKDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 379 ~~F~el~L~~~Ll~~L~~~g~~~pt~iQ~~aIp~-----il~grDvLv~ApTGSGKTlay 433 (633)
++|+++-..+..++.|... +...-......+.. ....+.++++||+|+|||.+.
T Consensus 11 ~~~~dlig~~~~~~~L~~~-l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a 69 (253)
T d1sxja2 11 TNLQQVCGNKGSVMKLKNW-LANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAA 69 (253)
T ss_dssp SSGGGCCSCHHHHHHHHHH-HHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHH
T ss_pred CCHHHhcCCHHHHHHHHHH-HHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHH
Confidence 4589998888888877652 00000000000000 001247999999999999743
No 84
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=67.93 E-value=7.3 Score=33.28 Aligned_cols=40 Identities=23% Similarity=0.220 Sum_probs=24.4
Q ss_pred CCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHH
Q 006737 416 GKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRE 466 (633)
Q Consensus 416 grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTRe 466 (633)
|.=-+++||=.||||.- +|-.+......+ -+++++-|...
T Consensus 7 G~l~lI~GpMfSGKTte-Li~~~~~~~~~g----------~~vl~i~~~~D 46 (141)
T d1xx6a1 7 GWVEVIVGPMYSGKSEE-LIRRIRRAKIAK----------QKIQVFKPEID 46 (141)
T ss_dssp CEEEEEECSTTSSHHHH-HHHHHHHHHHTT----------CCEEEEEEC--
T ss_pred eeEEEEEeccccHHHHH-HHHHHHHhhhcC----------CcEEEEEeccc
Confidence 33357889999999974 444444333222 24899999654
No 85
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=67.54 E-value=0.3 Score=45.43 Aligned_cols=95 Identities=15% Similarity=0.141 Sum_probs=59.3
Q ss_pred EEEEEcccHHHHHHH-----HHHHHHHHh-cCCCceEEEEECCccchH---HHHHHhcCCCcEEEECchhhHHHHhcccC
Q 006737 457 YVLILCPTRELASQI-----AAEAIALLK-NHDGIGVLTLVGGTRFKV---DQRRLESDPCQILVATPGRLLDHIENKSG 527 (633)
Q Consensus 457 ~vLILvPTReLa~Qi-----~~~l~~l~~-~~~~i~v~~l~Gg~~~~~---~~~~l~~~~~dILIaTPgrLl~lL~~~~~ 527 (633)
++.||||..+-...+ .+.+..+.+ ..+++++.+++|..+..+ ....+..+..+|||||. .++.
T Consensus 31 QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~~F~~g~~~iLVaTt-----ViE~--- 102 (206)
T d1gm5a4 31 QAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEGRYDILVSTT-----VIEV--- 102 (206)
T ss_dssp CBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHHHHTTTSSSBCCCSS-----CCCS---
T ss_pred CEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHHHHHCCCEEEEEEeh-----hhhc---
Confidence 578899987543322 222333332 235778889999876543 34566778899999994 2333
Q ss_pred cccccCCeeEEEEecccccCCcChHHHHHHHHHHCCC
Q 006737 528 LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR 564 (633)
Q Consensus 528 ~~~~Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk 564 (633)
.+++.++.++||..|+...-. ++.++.-..-+
T Consensus 103 -GIDip~a~~iii~~a~~fgls----qlhQlrGRvGR 134 (206)
T d1gm5a4 103 -GIDVPRANVMVIENPERFGLA----QLHQLRGRVGR 134 (206)
T ss_dssp -CSCCTTCCEEEBCSCSSSCTT----HHHHHHHTSCC
T ss_pred -cccccCCcEEEEEccCCccHH----HHHhhhhheee
Confidence 378899999999999986543 66676665543
No 86
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=66.49 E-value=4.6 Score=35.41 Aligned_cols=52 Identities=15% Similarity=0.228 Sum_probs=39.7
Q ss_pred CCeeEEEEecccccCCcC--hHHHHHHHHHHCCCCCcEEEEeccCChhhhcccc
Q 006737 533 MGLKMLVLDEADHLLDLG--FRKDVENIVDCLPRRRQSLLFSATMPKELVLKRE 584 (633)
Q Consensus 533 s~l~~LVIDEAD~Lld~g--f~~~l~~Il~~lpk~~Q~IlfSATl~~el~l~~~ 584 (633)
...++||+||+-..+..+ -...+..+++.-|...-+|+.--..|+++.-..+
T Consensus 93 ~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~p~~L~e~AD 146 (157)
T d1g5ta_ 93 PLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCHRDILDLAD 146 (157)
T ss_dssp TTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSCCHHHHHHCS
T ss_pred CccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCCCHHHHHhcc
Confidence 358899999999888777 4678888888888777777766677877654433
No 87
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=65.99 E-value=0.9 Score=38.98 Aligned_cols=19 Identities=32% Similarity=0.513 Sum_probs=16.2
Q ss_pred hCCCcEEEEccCCCCchhh
Q 006737 414 LEGKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 414 l~grDvLv~ApTGSGKTla 432 (633)
+.|+-+++.|++|||||..
T Consensus 2 ~~g~iI~l~G~~GsGKSTi 20 (176)
T d1zp6a1 2 LGGNILLLSGHPGSGKSTI 20 (176)
T ss_dssp CTTEEEEEEECTTSCHHHH
T ss_pred CCCeEEEEECCCCCCHHHH
Confidence 3577789999999999984
No 88
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=65.05 E-value=2.7 Score=38.92 Aligned_cols=68 Identities=18% Similarity=0.153 Sum_probs=37.0
Q ss_pred HHHhCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHh
Q 006737 411 SACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480 (633)
Q Consensus 411 p~il~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~ 480 (633)
+-++.|.-+++.|++|+|||... +-+...+.....-.......+..+||+. +-.-..++..++..+..
T Consensus 24 ~G~~pg~~~~i~G~~G~GKS~l~-l~la~~ia~g~~~~~~~~~~~~~vl~~~-~E~~~~~~~~Rl~~~~~ 91 (274)
T d1nlfa_ 24 PNMVAGTVGALVSPGGAGKSMLA-LQLAAQIAGGPDLLEVGELPTGPVIYLP-AEDPPTAIHHRLHALGA 91 (274)
T ss_dssp TTEETTSEEEEEESTTSSHHHHH-HHHHHHHHTCCCTTCCCCCCCCCEEEEE-SSSCHHHHHHHHHHHHT
T ss_pred CCccCCcEEEEEeCCCCCHHHHH-HHHHHHHHcCCCcccccccCCCceEEEe-ccchHHHHHHHHHHHhh
Confidence 44456778899999999999643 3333344433221111112233466664 33334556666666654
No 89
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=64.44 E-value=1.1 Score=37.62 Aligned_cols=15 Identities=27% Similarity=0.197 Sum_probs=12.8
Q ss_pred cEEEEccCCCCchhh
Q 006737 418 DAVVKAKTGTGKSIA 432 (633)
Q Consensus 418 DvLv~ApTGSGKTla 432 (633)
=++++|++|||||..
T Consensus 4 lIii~G~pGsGKTTl 18 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTW 18 (152)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 378899999999983
No 90
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=61.97 E-value=0.96 Score=38.69 Aligned_cols=16 Identities=25% Similarity=0.408 Sum_probs=14.3
Q ss_pred CcEEEEccCCCCchhh
Q 006737 417 KDAVVKAKTGTGKSIA 432 (633)
Q Consensus 417 rDvLv~ApTGSGKTla 432 (633)
+.+++.|++|+|||..
T Consensus 8 K~I~i~G~~GsGKTTl 23 (192)
T d1lw7a2 8 KTVAILGGESSGKSVL 23 (192)
T ss_dssp EEEEEECCTTSHHHHH
T ss_pred eEEEEECCCCCCHHHH
Confidence 5799999999999983
No 91
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=61.56 E-value=1.4 Score=40.63 Aligned_cols=15 Identities=20% Similarity=0.410 Sum_probs=13.5
Q ss_pred cEEEEccCCCCchhh
Q 006737 418 DAVVKAKTGTGKSIA 432 (633)
Q Consensus 418 DvLv~ApTGSGKTla 432 (633)
.+|+.||+|+|||..
T Consensus 34 ~ilL~GpPGtGKT~l 48 (273)
T d1gvnb_ 34 AFLLGGQPGSGKTSL 48 (273)
T ss_dssp EEEEECCTTSCTHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 599999999999984
No 92
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=61.10 E-value=1.4 Score=37.22 Aligned_cols=15 Identities=27% Similarity=0.428 Sum_probs=13.2
Q ss_pred cEEEEccCCCCchhh
Q 006737 418 DAVVKAKTGTGKSIA 432 (633)
Q Consensus 418 DvLv~ApTGSGKTla 432 (633)
-++++|++|||||+.
T Consensus 4 lI~i~G~~GsGKTTv 18 (176)
T d2bdta1 4 LYIITGPAGVGKSTT 18 (176)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 478999999999984
No 93
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=60.49 E-value=1.7 Score=36.90 Aligned_cols=17 Identities=18% Similarity=0.317 Sum_probs=14.4
Q ss_pred CcEEEEccCCCCchhhh
Q 006737 417 KDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 417 rDvLv~ApTGSGKTlay 433 (633)
..++++|+.|||||...
T Consensus 5 ~~I~i~G~pGsGKTTia 21 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLG 21 (173)
T ss_dssp CCEEEECSTTSSHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 46899999999999743
No 94
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=60.16 E-value=1.6 Score=37.24 Aligned_cols=17 Identities=29% Similarity=0.579 Sum_probs=14.8
Q ss_pred CCcEEEEccCCCCchhh
Q 006737 416 GKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 416 grDvLv~ApTGSGKTla 432 (633)
+.++++.|++|||||..
T Consensus 5 ~~~I~i~G~~GsGKTT~ 21 (174)
T d1y63a_ 5 GINILITGTPGTGKTSM 21 (174)
T ss_dssp SCEEEEECSTTSSHHHH
T ss_pred CCEEEEEeCCCCCHHHH
Confidence 45799999999999984
No 95
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}
Probab=56.92 E-value=2.2 Score=37.44 Aligned_cols=47 Identities=17% Similarity=0.108 Sum_probs=32.8
Q ss_pred hCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHH
Q 006737 414 LEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAI 476 (633)
Q Consensus 414 l~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~ 476 (633)
+.|++++|.+.-|++|+.+|.|-- . +.++.|+.-|.+-+..+.+.+.
T Consensus 16 ~~~k~vlIlGaGGaarai~~al~~------~----------g~~i~I~nRt~~ka~~l~~~~~ 62 (170)
T d1nyta1 16 RPGLRILLIGAGGASRGVLLPLLS------L----------DCAVTITNRTVSRAEELAKLFA 62 (170)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH------T----------TCEEEEECSSHHHHHHHHHHTG
T ss_pred CCCCEEEEECCcHHHHHHHHHhcc------c----------ceEEEeccchHHHHHHHHHHHh
Confidence 468899999999999998776421 1 1346677777777776665544
No 96
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.85 E-value=6.7 Score=33.07 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=23.3
Q ss_pred EEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHH
Q 006737 419 AVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRE 466 (633)
Q Consensus 419 vLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTRe 466 (633)
-+++||=.||||.- +|-.+......+ -+++++-|...
T Consensus 5 ~li~GpMfsGKTt~-Li~~~~~~~~~g----------~~v~~ikp~~D 41 (133)
T d1xbta1 5 QVILGPMFSGKSTE-LMRRVRRFQIAQ----------YKCLVIKYAKD 41 (133)
T ss_dssp EEEECCTTSCHHHH-HHHHHHHHHTTT----------CCEEEEEETTC
T ss_pred EEEEecccCHHHHH-HHHHHHHHHHcC----------CcEEEEecccc
Confidence 47889999999973 444444332221 24888887643
No 97
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.52 E-value=2.9 Score=40.66 Aligned_cols=24 Identities=25% Similarity=0.400 Sum_probs=19.3
Q ss_pred HHHHHhCCCc--EEEEccCCCCchhh
Q 006737 409 TLSACLEGKD--AVVKAKTGTGKSIA 432 (633)
Q Consensus 409 aIp~il~grD--vLv~ApTGSGKTla 432 (633)
.+..++.|.| +++.|+||||||..
T Consensus 67 lv~~~l~G~n~~i~aYGqtgSGKTyT 92 (323)
T d1bg2a_ 67 IVKDVLEGYNGTIFAYGQTSSGKTHT 92 (323)
T ss_dssp HHHHHHTTCCEEEEEECSTTSSHHHH
T ss_pred HHHHHHcCCCcceeeecccCCCCcee
Confidence 4666788875 67889999999975
No 98
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=55.51 E-value=2.1 Score=39.84 Aligned_cols=72 Identities=15% Similarity=0.085 Sum_probs=44.5
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccch---HHHHHHhcCCCcEEEECchhhHHHHhcccCcccccC
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK---VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~---~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls 533 (633)
.+||.|+|+..|..+++.+... ++|+.... .....+..+.++|||||.. +.+.+..+ +++.
T Consensus 27 ~~iif~~~~~~~~~l~~~l~~~-----------~hg~~~~~~R~~~~~~f~~g~~~vLVaT~a-~~~v~~rG----lDip 90 (248)
T d1gkub2 27 GGIIYARTGEEAEEIYESLKNK-----------FRIGIVTATKKGDYEKFVEGEIDHLIGTAH-YYGTLVRG----LDLP 90 (248)
T ss_dssp CEEEEESSHHHHHHHHHTTTTS-----------SCEEECTTSSSHHHHHHHHTSCSEEEEECC-------CC----SCCT
T ss_pred CEEEEECCHHHHHHHHHHHHHh-----------ccCCCCHHHHHHHHHHHHhCCCeEEEEecc-ccchhhhc----cCcc
Confidence 4899999999998887665432 23333322 2355667788999999952 11223333 6775
Q ss_pred C-eeEEEEeccc
Q 006737 534 G-LKMLVLDEAD 544 (633)
Q Consensus 534 ~-l~~LVIDEAD 544 (633)
+ |++||.=.+.
T Consensus 91 ~~v~~VI~~d~P 102 (248)
T d1gkub2 91 ERIRFAVFVGCP 102 (248)
T ss_dssp TTCCEEEEESCC
T ss_pred ccccEEEEeCCC
Confidence 4 8988865554
No 99
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=55.39 E-value=4.4 Score=37.60 Aligned_cols=19 Identities=32% Similarity=0.401 Sum_probs=15.7
Q ss_pred hCCCcEEEEccCCCCchhh
Q 006737 414 LEGKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 414 l~grDvLv~ApTGSGKTla 432 (633)
..|.=+++.|+||+|||..
T Consensus 33 ~~G~l~vi~G~~G~GKT~~ 51 (277)
T d1cr2a_ 33 RGGEVIMVTSGSGMGKSTF 51 (277)
T ss_dssp CTTCEEEEECSTTSSHHHH
T ss_pred CCCeEEEEEeCCCCCHHHH
Confidence 4567789999999999953
No 100
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=54.98 E-value=2.1 Score=36.90 Aligned_cols=17 Identities=35% Similarity=0.366 Sum_probs=14.8
Q ss_pred CcEEEEccCCCCchhhh
Q 006737 417 KDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 417 rDvLv~ApTGSGKTlay 433 (633)
++++++|+.|+|||...
T Consensus 1 k~I~liG~~GsGKsTi~ 17 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLA 17 (161)
T ss_dssp CCEEEECCTTSCHHHHH
T ss_pred CcEEEECCCCCCHHHHH
Confidence 57899999999999853
No 101
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=54.98 E-value=6.4 Score=38.07 Aligned_cols=36 Identities=28% Similarity=0.522 Sum_probs=30.4
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccch
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~ 497 (633)
++||.+++|..|.++...+.+. ++++..++++.+..
T Consensus 38 k~LVFcnSR~~aE~La~~L~~~-----Gi~a~~~Hgglsq~ 73 (299)
T d1a1va2 38 RHLIFCHSKKKCDELAAKLVAL-----GINAVAYYRGLDVS 73 (299)
T ss_dssp EEEEECSSHHHHHHHHHHHHHT-----TCCEEEECTTSCGG
T ss_pred CEEEECCcHHHHHHHHHHHHHC-----CCCEEEEeCCchHH
Confidence 5999999999999999888765 78888899886644
No 102
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.84 E-value=2.7 Score=36.29 Aligned_cols=18 Identities=22% Similarity=0.176 Sum_probs=15.3
Q ss_pred CCCcEEEEccCCCCchhh
Q 006737 415 EGKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTla 432 (633)
.|+-+++.|++|+|||..
T Consensus 22 ~G~v~~i~G~~GsGKT~l 39 (242)
T d1n0wa_ 22 TGSITEMFGEFRTGKTQI 39 (242)
T ss_dssp TTSEEEEECCTTSSHHHH
T ss_pred CCEEEEEEeCCCCCHHHH
Confidence 357899999999999963
No 103
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=54.66 E-value=11 Score=35.67 Aligned_cols=93 Identities=18% Similarity=0.173 Sum_probs=49.5
Q ss_pred CCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCc
Q 006737 415 EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~ 494 (633)
.|+-+.+.++.|+|||...+..+.+ .... +..++||---..+..+ .++.+.-..
T Consensus 59 ~g~i~e~~G~~~~GKT~l~l~~~~~-~q~~----------g~~~vyIDtE~~~~~e---~a~~~GvD~------------ 112 (269)
T d1mo6a1 59 RGRVIEIYGPESSGKTTVALHAVAN-AQAA----------GGVAAFIDAEHALDPD---YAKKLGVDT------------ 112 (269)
T ss_dssp SSSEEEEECSSSSSHHHHHHHHHHH-HHHT----------TCEEEEEESSCCCCHH---HHHHHTCCG------------
T ss_pred cceeEEEecCCCcHHHHHHHHHHHH-HhcC----------CCEEEEEECCccCCHH---HHHHhCCCH------------
Confidence 5678899999999999754433332 2221 1356666443333222 234442110
Q ss_pred cchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCeeEEEEecccccC
Q 006737 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547 (633)
Q Consensus 495 ~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDEAD~Ll 547 (633)
-+|+|..|....+.+.--.. ...-..+.+||||=+-.+.
T Consensus 113 -------------d~il~~~~~~~E~~~~~~~~-l~~~~~~~liIiDSi~al~ 151 (269)
T d1mo6a1 113 -------------DSLLVSQPDTGEQALEIADM-LIRSGALDIVVIDSVAALV 151 (269)
T ss_dssp -------------GGCEEECCSSHHHHHHHHHH-HHHTTCEEEEEEECSTTCC
T ss_pred -------------HHeEEecCCCHHHHHHHHHH-HHhcCCCCEEEEecccccc
Confidence 14566655554433321100 0112467899999998776
No 104
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=53.28 E-value=1.7 Score=36.98 Aligned_cols=20 Identities=15% Similarity=0.185 Sum_probs=16.7
Q ss_pred hCCCcEEEEccCCCCchhhh
Q 006737 414 LEGKDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 414 l~grDvLv~ApTGSGKTlay 433 (633)
..|.-++++|+.|||||...
T Consensus 4 ~~g~~I~l~G~~GsGKTTia 23 (183)
T d1m8pa3 4 TQGFTIFLTGYMNSGKDAIA 23 (183)
T ss_dssp TCCEEEEEECSTTSSHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHH
Confidence 45677889999999999854
No 105
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=53.09 E-value=2.4 Score=35.85 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=15.0
Q ss_pred CCCcEEEEccCCCCchhh
Q 006737 415 EGKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTla 432 (633)
..+=++++|++|||||..
T Consensus 2 ~~kiI~l~G~~GsGKsTv 19 (178)
T d1qhxa_ 2 TTRMIILNGGSSAGKSGI 19 (178)
T ss_dssp CCCEEEEECCTTSSHHHH
T ss_pred CCeEEEEECCCCCCHHHH
Confidence 456688999999999974
No 106
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=53.09 E-value=24 Score=32.68 Aligned_cols=30 Identities=17% Similarity=0.053 Sum_probs=19.4
Q ss_pred eEEEEECCccchHHHHHHhcCCCcEEEECc
Q 006737 486 GVLTLVGGTRFKVDQRRLESDPCQILVATP 515 (633)
Q Consensus 486 ~v~~l~Gg~~~~~~~~~l~~~~~dILIaTP 515 (633)
++.++..+.....+...+...++.|||+|-
T Consensus 136 r~LlVLDDv~~~~~~~~~~~~~srilvTTR 165 (277)
T d2a5yb3 136 NTLFVFDDVVQEETIRWAQELRLRCLVTTR 165 (277)
T ss_dssp TEEEEEEEECCHHHHHHHHHTTCEEEEEES
T ss_pred CeeEecchhhHHhhhhhhcccCceEEEEee
Confidence 455566665555555555556788999885
No 107
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=52.52 E-value=1.5 Score=40.26 Aligned_cols=15 Identities=20% Similarity=0.175 Sum_probs=12.3
Q ss_pred EEEEccCCCCchhhh
Q 006737 419 AVVKAKTGTGKSIAF 433 (633)
Q Consensus 419 vLv~ApTGSGKTlay 433 (633)
++++||+|+|||++.
T Consensus 49 l~l~GppGtGKT~l~ 63 (287)
T d1w5sa2 49 YGSIGRVGIGKTTLA 63 (287)
T ss_dssp EECTTCCSSSHHHHH
T ss_pred EEeECCCCCCHHHHH
Confidence 456799999999863
No 108
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=51.59 E-value=54 Score=26.66 Aligned_cols=42 Identities=12% Similarity=0.120 Sum_probs=28.0
Q ss_pred CeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChh
Q 006737 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE 578 (633)
Q Consensus 534 ~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~e 578 (633)
.+++||+|- .|.+.+-...+..+.. ..++.++|++||.-..+
T Consensus 44 ~~dlvilD~--~mp~~~G~e~~~~lr~-~~~~~piI~lT~~~~~~ 85 (137)
T d1ny5a1 44 HFNVVLLDL--LLPDVNGLEILKWIKE-RSPETEVIVITGHGTIK 85 (137)
T ss_dssp CCSEEEEES--BCSSSBHHHHHHHHHH-HCTTSEEEEEEETTCHH
T ss_pred ccccchHHH--hhhhhhHHHHHHHHHH-hCCCCCEEEEECCCCHH
Confidence 577899992 4555544455555544 45678999999976555
No 109
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=50.59 E-value=4.7 Score=34.12 Aligned_cols=16 Identities=31% Similarity=0.449 Sum_probs=13.7
Q ss_pred CcEEEEccCCCCchhh
Q 006737 417 KDAVVKAKTGTGKSIA 432 (633)
Q Consensus 417 rDvLv~ApTGSGKTla 432 (633)
+-+++.|++|||||..
T Consensus 2 kiI~i~G~~GsGKsT~ 17 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTS 17 (190)
T ss_dssp CEEEEECCTTSCHHHH
T ss_pred CEEEEECCCCCCHHHH
Confidence 4578999999999983
No 110
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.35 E-value=3.1 Score=36.75 Aligned_cols=16 Identities=25% Similarity=0.368 Sum_probs=13.8
Q ss_pred CcEEEEccCCCCchhh
Q 006737 417 KDAVVKAKTGTGKSIA 432 (633)
Q Consensus 417 rDvLv~ApTGSGKTla 432 (633)
+=++++||+|+|||..
T Consensus 4 k~ivl~Gpsg~GK~tl 19 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHI 19 (178)
T ss_dssp CEEEEECCTTSSHHHH
T ss_pred CcEEEECCCCCCHHHH
Confidence 4589999999999983
No 111
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=50.11 E-value=4.1 Score=40.36 Aligned_cols=24 Identities=25% Similarity=0.455 Sum_probs=18.5
Q ss_pred HHHHHhCCCc--EEEEccCCCCchhh
Q 006737 409 TLSACLEGKD--AVVKAKTGTGKSIA 432 (633)
Q Consensus 409 aIp~il~grD--vLv~ApTGSGKTla 432 (633)
++..++.|.| +++.|+||||||..
T Consensus 105 lv~~~l~G~n~tifaYGqTGSGKTyT 130 (362)
T d1v8ka_ 105 LVQTIFEGGKATCFAYGQTGSGKTHT 130 (362)
T ss_dssp HHHHHHTTCEEEEEEEESTTSSHHHH
T ss_pred HHHHHHhccCceEEeeccCCCCCcee
Confidence 4556778875 56779999999976
No 112
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=49.82 E-value=4.2 Score=39.98 Aligned_cols=24 Identities=33% Similarity=0.512 Sum_probs=19.1
Q ss_pred HHHHHhCCCc--EEEEccCCCCchhh
Q 006737 409 TLSACLEGKD--AVVKAKTGTGKSIA 432 (633)
Q Consensus 409 aIp~il~grD--vLv~ApTGSGKTla 432 (633)
++..++.|.| +++.|+||||||..
T Consensus 71 lv~~~l~G~n~ti~aYG~tgSGKT~T 96 (354)
T d1goja_ 71 TVDDILNGYNGTVFAYGQTGAGKSYT 96 (354)
T ss_dssp HHHHHTTTCCEEEEEECSTTSSHHHH
T ss_pred HHHHhhccCceeEEecccCCCCccee
Confidence 4566778876 67779999999975
No 113
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=49.49 E-value=59 Score=25.89 Aligned_cols=85 Identities=15% Similarity=0.114 Sum_probs=49.4
Q ss_pred eEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCe
Q 006737 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGL 535 (633)
Q Consensus 456 ~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l 535 (633)
|++|||=-...++..+...+... ++.|.+ +.+....+.++... ..
T Consensus 2 PkILiVDD~~~~~~~l~~~L~~~-----g~~v~~----------------------a~~~~eal~~~~~~--------~~ 46 (121)
T d1ys7a2 2 PRVLVVDDDSDVLASLERGLRLS-----GFEVAT----------------------AVDGAEALRSATEN--------RP 46 (121)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-----TCEEEE----------------------ESSHHHHHHHHHHS--------CC
T ss_pred CEEEEEECCHHHHHHHHHHHHHC-----CCEEEE----------------------ECCHHHHHHHHHhC--------CC
Confidence 57888888777777666555443 333322 22333344444432 46
Q ss_pred eEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChh
Q 006737 536 KMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE 578 (633)
Q Consensus 536 ~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~e 578 (633)
++||+|- .|.+.+=...+..|. ...+..++|++||.-..+
T Consensus 47 dlvl~D~--~mP~~~G~el~~~ir-~~~~~~piI~lt~~~~~~ 86 (121)
T d1ys7a2 47 DAIVLDI--NMPVLDGVSVVTALR-AMDNDVPVCVLSARSSVD 86 (121)
T ss_dssp SEEEEES--SCSSSCHHHHHHHHH-HTTCCCCEEEEECCCTTT
T ss_pred CEEEEEe--eccCcccHHHHHHHH-hcCCCCEEEEEEeeCCHH
Confidence 6788882 234444344444544 455689999999976555
No 114
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=49.28 E-value=2.8 Score=40.54 Aligned_cols=18 Identities=39% Similarity=0.361 Sum_probs=15.7
Q ss_pred CCCcEEEEccCCCCchhh
Q 006737 415 EGKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTla 432 (633)
.+.++|+.|++|+|||++
T Consensus 27 ~~h~vLl~G~pG~GKT~l 44 (333)
T d1g8pa_ 27 GIGGVLVFGDRGTGKSTA 44 (333)
T ss_dssp GGCCEEEECCGGGCTTHH
T ss_pred CCCeEEEECCCCccHHHH
Confidence 456899999999999984
No 115
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=48.77 E-value=2.9 Score=35.40 Aligned_cols=17 Identities=29% Similarity=0.311 Sum_probs=13.9
Q ss_pred CcEEEEccCCCCchhhh
Q 006737 417 KDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 417 rDvLv~ApTGSGKTlay 433 (633)
+=++++|++|||||...
T Consensus 7 ~iivl~G~~GsGKsT~a 23 (171)
T d1knqa_ 7 HIYVLMGVSGSGKSAVA 23 (171)
T ss_dssp EEEEEECSTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 34788999999999854
No 116
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=47.94 E-value=4.7 Score=39.50 Aligned_cols=24 Identities=33% Similarity=0.508 Sum_probs=18.7
Q ss_pred HHHHHhCCCc--EEEEccCCCCchhh
Q 006737 409 TLSACLEGKD--AVVKAKTGTGKSIA 432 (633)
Q Consensus 409 aIp~il~grD--vLv~ApTGSGKTla 432 (633)
++..++.|.| +++.|+||||||..
T Consensus 78 lv~~~l~G~n~ti~aYGqTgSGKT~T 103 (349)
T d2zfia1 78 MLQHAFEGYNVCIFAYGQTGAGKSYT 103 (349)
T ss_dssp HHHHHHTTCCEEEEEECSTTSSHHHH
T ss_pred HHHHHHhccCceeeeeccCCCCCcee
Confidence 4556678875 67889999999975
No 117
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=47.83 E-value=4 Score=40.36 Aligned_cols=24 Identities=21% Similarity=0.505 Sum_probs=19.2
Q ss_pred HHHHHhCCCc--EEEEccCCCCchhh
Q 006737 409 TLSACLEGKD--AVVKAKTGTGKSIA 432 (633)
Q Consensus 409 aIp~il~grD--vLv~ApTGSGKTla 432 (633)
.+..++.|.| +++.|+||||||..
T Consensus 66 lv~~~l~G~n~~i~aYGqTGSGKTyT 91 (364)
T d1sdma_ 66 LVQSAVDGYNVCIFAYGQTGSGKTFT 91 (364)
T ss_dssp HHHHHHTTCEEEEEEECSTTSSHHHH
T ss_pred HHHHHhcCCceeeeccccCCCCcccc
Confidence 4667778875 67779999999975
No 118
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=47.20 E-value=15 Score=34.51 Aligned_cols=20 Identities=20% Similarity=0.267 Sum_probs=16.1
Q ss_pred CCCcEEEEccCCCCchhhhH
Q 006737 415 EGKDAVVKAKTGTGKSIAFL 434 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTlayl 434 (633)
.|+=+.+.++.|||||...+
T Consensus 56 ~g~itei~G~~~sGKT~l~l 75 (268)
T d1xp8a1 56 RGRITEIYGPESGGKTTLAL 75 (268)
T ss_dssp TTSEEEEEESTTSSHHHHHH
T ss_pred CceEEEEecCCccchHHHHH
Confidence 45678899999999997543
No 119
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}
Probab=46.60 E-value=12 Score=32.65 Aligned_cols=22 Identities=23% Similarity=0.308 Sum_probs=17.3
Q ss_pred hCCCcEEEEccCCCCchhhhHH
Q 006737 414 LEGKDAVVKAKTGTGKSIAFLL 435 (633)
Q Consensus 414 l~grDvLv~ApTGSGKTlaylL 435 (633)
+.+++++|.+.-|+||..+|.+
T Consensus 16 l~~k~vlIlGaGGaarai~~al 37 (182)
T d1vi2a1 16 IKGKTMVLLGAGGASTAIGAQG 37 (182)
T ss_dssp CTTCEEEEECCSHHHHHHHHHH
T ss_pred cCCCEEEEECCcHHHHHHHHHH
Confidence 4678999999888888876554
No 120
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=46.58 E-value=7.7 Score=32.31 Aligned_cols=13 Identities=38% Similarity=0.483 Sum_probs=12.0
Q ss_pred EEEEccCCCCchh
Q 006737 419 AVVKAKTGTGKSI 431 (633)
Q Consensus 419 vLv~ApTGSGKTl 431 (633)
+.++|+.|||||.
T Consensus 5 i~itG~~GSGKTT 17 (170)
T d1np6a_ 5 LAFAAWSGTGKTT 17 (170)
T ss_dssp EEEECCTTSCHHH
T ss_pred EEEEcCCCCCHHH
Confidence 6789999999997
No 121
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=45.67 E-value=3.3 Score=36.96 Aligned_cols=17 Identities=29% Similarity=0.220 Sum_probs=15.2
Q ss_pred CCCcEEEEccCCCCchh
Q 006737 415 EGKDAVVKAKTGTGKSI 431 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTl 431 (633)
.|+-+++.|++|+|||.
T Consensus 33 ~G~~~li~G~pGsGKT~ 49 (251)
T d1szpa2 33 TGSITELFGEFRTGKSQ 49 (251)
T ss_dssp SSSEEEEEESTTSSHHH
T ss_pred CCeEEEEEcCCCCCHHH
Confidence 46789999999999996
No 122
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=45.48 E-value=11 Score=34.81 Aligned_cols=53 Identities=19% Similarity=0.159 Sum_probs=41.3
Q ss_pred EEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECc
Q 006737 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515 (633)
Q Consensus 457 ~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTP 515 (633)
++||.++++.-+..+++.+.+. +..+..++|+.... ....+..+..+++|+|.
T Consensus 180 ~~lvf~~~~~~~~~l~~~L~~~-----~~~~~~l~~~~~~~-~~~~~~~~~~~~lvaT~ 232 (305)
T d2bmfa2 180 KTVWFVPSIKAGNDIAACLRKN-----GKKVIQLSRKTFDS-EYIKTRTNDWDFVVTTD 232 (305)
T ss_dssp CEEEECSCHHHHHHHHHHHHHH-----TCCCEECCTTCHHH-HGGGGGTSCCSEEEECG
T ss_pred CEEEEeccHHHHHHHHHHHHhC-----CCCEEEeCCcChHH-HHhhhhccchhhhhhhH
Confidence 4899999999999998888776 55677788876543 44556667789999996
No 123
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=45.42 E-value=55 Score=26.80 Aligned_cols=43 Identities=7% Similarity=-0.035 Sum_probs=28.6
Q ss_pred CeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhh
Q 006737 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL 579 (633)
Q Consensus 534 ~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el 579 (633)
..++||+| -.|.+++=...+..|... .++.++|++||.-..+.
T Consensus 44 ~~dlil~D--~~mP~~~G~el~~~lr~~-~~~~pvI~lT~~~~~~~ 86 (140)
T d1qkka_ 44 FAGIVISD--IRMPGMDGLALFRKILAL-DPDLPMILVTGHGDIPM 86 (140)
T ss_dssp CCSEEEEE--SCCSSSCHHHHHHHHHHH-CTTSCEEEEECGGGHHH
T ss_pred CcchHHHh--hccCCCCHHHHHHHHHHh-CCCCcEEEEECCCCHHH
Confidence 46778888 345555544455555554 45789999999776663
No 124
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=44.66 E-value=3.7 Score=35.99 Aligned_cols=14 Identities=36% Similarity=0.356 Sum_probs=12.6
Q ss_pred cEEEEccCCCCchh
Q 006737 418 DAVVKAKTGTGKSI 431 (633)
Q Consensus 418 DvLv~ApTGSGKTl 431 (633)
=+|++|++|||||.
T Consensus 16 liil~G~pGsGKST 29 (172)
T d1yj5a2 16 VVVAVGFPGAGKST 29 (172)
T ss_dssp EEEEECCTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47889999999997
No 125
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=44.60 E-value=3.6 Score=36.23 Aligned_cols=15 Identities=40% Similarity=0.660 Sum_probs=13.3
Q ss_pred CcEEEEccCCCCchh
Q 006737 417 KDAVVKAKTGTGKSI 431 (633)
Q Consensus 417 rDvLv~ApTGSGKTl 431 (633)
|-++++||+|+|||.
T Consensus 2 rpIvl~GpsG~GK~t 16 (186)
T d1gkya_ 2 RPIVISGPSGTGKST 16 (186)
T ss_dssp CCEEEECCTTSSHHH
T ss_pred CeEEEECCCCCCHHH
Confidence 348999999999998
No 126
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=43.02 E-value=4.2 Score=35.40 Aligned_cols=17 Identities=29% Similarity=0.495 Sum_probs=14.8
Q ss_pred CCcEEEEccCCCCchhh
Q 006737 416 GKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 416 grDvLv~ApTGSGKTla 432 (633)
|+=++++||+|+|||..
T Consensus 2 G~iivl~GpsG~GK~tl 18 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTV 18 (182)
T ss_dssp CCEEEEECSTTSSHHHH
T ss_pred CeEEEEECCCCCCHHHH
Confidence 56689999999999984
No 127
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=42.87 E-value=4.5 Score=36.47 Aligned_cols=18 Identities=22% Similarity=0.174 Sum_probs=15.4
Q ss_pred CCCcEEEEccCCCCchhh
Q 006737 415 EGKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTla 432 (633)
.|+-+++.|++|+|||..
T Consensus 35 ~G~~~li~G~pGsGKT~~ 52 (254)
T d1pzna2 35 TQAITEVFGEFGSGKTQL 52 (254)
T ss_dssp SSEEEEEEESTTSSHHHH
T ss_pred CCEEEEEEcCCCCCHHHH
Confidence 457899999999999973
No 128
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=42.81 E-value=5 Score=39.22 Aligned_cols=26 Identities=23% Similarity=0.507 Sum_probs=20.2
Q ss_pred HHHHHHhCCCc--EEEEccCCCCchhhh
Q 006737 408 ATLSACLEGKD--AVVKAKTGTGKSIAF 433 (633)
Q Consensus 408 ~aIp~il~grD--vLv~ApTGSGKTlay 433 (633)
..+..++.|.| +++.|+||||||...
T Consensus 73 ~~v~~~l~G~n~~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 73 QLVQSSLDGYNVCIFAYGQTGSGKTFTM 100 (342)
T ss_dssp HHHGGGGGTCCEEEEEECCTTSSHHHHH
T ss_pred hhhcchhcccccceeeeeccCCcccccc
Confidence 35677788875 567899999999864
No 129
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=42.76 E-value=7.3 Score=38.50 Aligned_cols=35 Identities=17% Similarity=0.100 Sum_probs=22.8
Q ss_pred CCCCCcHHHHHHHHHHhCC----CcEEEEccCCCCchhh
Q 006737 398 GYIQMTRVQEATLSACLEG----KDAVVKAKTGTGKSIA 432 (633)
Q Consensus 398 g~~~pt~iQ~~aIp~il~g----rDvLv~ApTGSGKTla 432 (633)
++......-..++..++.| +.++++||+|+|||+.
T Consensus 132 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~g~~~~gk~~~ 170 (362)
T d1svma_ 132 LLPKMDSVVYDFLKCMVYNIPKKRYWLFKGPIDSGKTTL 170 (362)
T ss_dssp TSTTHHHHHHHHHHHHHHCCTTCCEEEEECSTTSSHHHH
T ss_pred cccchHHHHHHHHHHHHhCCCCcCeEEEECCCCCCHHHH
Confidence 4444444444444444443 5799999999999974
No 130
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=42.25 E-value=4.5 Score=36.58 Aligned_cols=17 Identities=41% Similarity=0.522 Sum_probs=14.8
Q ss_pred CCcEEEEccCCCCchhh
Q 006737 416 GKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 416 grDvLv~ApTGSGKTla 432 (633)
|+=++++||+|+|||..
T Consensus 2 G~livi~GPSG~GK~tl 18 (205)
T d1s96a_ 2 GTLYIVSAPSGAGKSSL 18 (205)
T ss_dssp CCEEEEECCTTSCHHHH
T ss_pred CeEEEEECCCCCCHHHH
Confidence 66689999999999984
No 131
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=41.93 E-value=7.3 Score=32.98 Aligned_cols=23 Identities=30% Similarity=0.573 Sum_probs=15.9
Q ss_pred EEEEccCCCCchhhhHHHHHHHHHH
Q 006737 419 AVVKAKTGTGKSIAFLLPAIEAVLK 443 (633)
Q Consensus 419 vLv~ApTGSGKTlaylLPiL~~l~~ 443 (633)
+++.|+.|+|||.. .-.|...+.
T Consensus 4 ivi~G~~GsGKTT~--~~~La~~L~ 26 (194)
T d1nksa_ 4 GIVTGIPGVGKSTV--LAKVKEILD 26 (194)
T ss_dssp EEEEECTTSCHHHH--HHHHHHHHH
T ss_pred EEEECCCCCCHHHH--HHHHHHHHH
Confidence 57889999999984 444444443
No 132
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=41.84 E-value=7.8 Score=33.14 Aligned_cols=17 Identities=18% Similarity=0.407 Sum_probs=12.8
Q ss_pred CCcEE-EEccCCCCchhh
Q 006737 416 GKDAV-VKAKTGTGKSIA 432 (633)
Q Consensus 416 grDvL-v~ApTGSGKTla 432 (633)
++=+| |+|++|||||..
T Consensus 21 ~~~iIgI~G~~GSGKSTl 38 (198)
T d1rz3a_ 21 GRLVLGIDGLSRSGKTTL 38 (198)
T ss_dssp SSEEEEEEECTTSSHHHH
T ss_pred CCEEEEEECCCCCCHHHH
Confidence 33344 889999999974
No 133
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=40.63 E-value=5 Score=35.02 Aligned_cols=16 Identities=13% Similarity=0.339 Sum_probs=13.7
Q ss_pred cEEEEccCCCCchhhh
Q 006737 418 DAVVKAKTGTGKSIAF 433 (633)
Q Consensus 418 DvLv~ApTGSGKTlay 433 (633)
.+++.||+|||||...
T Consensus 5 ~I~i~GppGsGKsT~a 20 (189)
T d1zaka1 5 KVMISGAPASGKGTQC 20 (189)
T ss_dssp CEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4889999999999844
No 134
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=40.23 E-value=6.8 Score=37.75 Aligned_cols=16 Identities=25% Similarity=0.318 Sum_probs=14.0
Q ss_pred cEEEEccCCCCchhhh
Q 006737 418 DAVVKAKTGTGKSIAF 433 (633)
Q Consensus 418 DvLv~ApTGSGKTlay 433 (633)
.++++||||+|||...
T Consensus 54 ~~lf~Gp~GvGKT~la 69 (315)
T d1r6bx3 54 SFLFAGPTGVGKTEVT 69 (315)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCcchhHHHH
Confidence 6899999999999743
No 135
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=40.02 E-value=6.3 Score=38.92 Aligned_cols=25 Identities=24% Similarity=0.509 Sum_probs=19.8
Q ss_pred HHHHHHhCCCc--EEEEccCCCCchhh
Q 006737 408 ATLSACLEGKD--AVVKAKTGTGKSIA 432 (633)
Q Consensus 408 ~aIp~il~grD--vLv~ApTGSGKTla 432 (633)
.++..++.|.| +++.|+||||||..
T Consensus 115 plv~~vl~G~n~ti~aYGqtGSGKT~T 141 (368)
T d2ncda_ 115 PLIQSALDGYNICIFAYGQTGSGKTYT 141 (368)
T ss_dssp HHHHHHHTTCEEEEEEECSTTSSHHHH
T ss_pred HHHHHHhcccceeEEeeccCCCccceE
Confidence 35667778875 67889999999975
No 136
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=39.91 E-value=6.9 Score=38.13 Aligned_cols=25 Identities=28% Similarity=0.474 Sum_probs=19.5
Q ss_pred HHHHHHhCCCc--EEEEccCCCCchhh
Q 006737 408 ATLSACLEGKD--AVVKAKTGTGKSIA 432 (633)
Q Consensus 408 ~aIp~il~grD--vLv~ApTGSGKTla 432 (633)
.++..++.|.+ +++.|+||||||..
T Consensus 71 ~lv~~~l~G~n~~i~aYGqtgSGKTyT 97 (345)
T d1x88a1 71 PILDEVIMGYNCTIFAYGQTGTGKTFT 97 (345)
T ss_dssp HHHHHHHTTCEEEEEEEECTTSSHHHH
T ss_pred HhHHHHhccCCceEEeeeeccccceEE
Confidence 34566788875 56889999999975
No 137
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=39.80 E-value=6.6 Score=33.66 Aligned_cols=18 Identities=11% Similarity=0.086 Sum_probs=14.9
Q ss_pred CcEEEEccCCCCchhhhH
Q 006737 417 KDAVVKAKTGTGKSIAFL 434 (633)
Q Consensus 417 rDvLv~ApTGSGKTlayl 434 (633)
+.+++.|+.|||||...-
T Consensus 3 ~~Iil~G~~GsGKSTia~ 20 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGR 20 (170)
T ss_dssp CCEEEESCTTSSHHHHHH
T ss_pred CCEEEECCCCCCHHHHHH
Confidence 568899999999998543
No 138
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=39.43 E-value=4.9 Score=35.52 Aligned_cols=15 Identities=33% Similarity=0.523 Sum_probs=13.1
Q ss_pred cEEEEccCCCCchhh
Q 006737 418 DAVVKAKTGTGKSIA 432 (633)
Q Consensus 418 DvLv~ApTGSGKTla 432 (633)
=++++||+|+|||..
T Consensus 2 pIvl~GPsGsGK~tl 16 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTL 16 (190)
T ss_dssp CEEEECCTTSSHHHH
T ss_pred eEEEECCCCCCHHHH
Confidence 378999999999984
No 139
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=37.76 E-value=6.7 Score=33.53 Aligned_cols=16 Identities=25% Similarity=0.368 Sum_probs=13.7
Q ss_pred cEEEEccCCCCchhhh
Q 006737 418 DAVVKAKTGTGKSIAF 433 (633)
Q Consensus 418 DvLv~ApTGSGKTlay 433 (633)
.+++.||+|||||+..
T Consensus 2 ~I~i~G~pGSGKsT~a 17 (182)
T d1zina1 2 NLVLMGLPGAGKGTQA 17 (182)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999854
No 140
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.43 E-value=2.8 Score=36.28 Aligned_cols=19 Identities=21% Similarity=0.372 Sum_probs=15.1
Q ss_pred CCcEEEEccCCCCchhhhH
Q 006737 416 GKDAVVKAKTGTGKSIAFL 434 (633)
Q Consensus 416 grDvLv~ApTGSGKTlayl 434 (633)
|.-++++|++|||||...-
T Consensus 19 g~vI~L~G~pGSGKTTiAk 37 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVSM 37 (195)
T ss_dssp CEEEEEESSCHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4567789999999998543
No 141
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.84 E-value=5.2 Score=37.57 Aligned_cols=17 Identities=24% Similarity=0.444 Sum_probs=14.8
Q ss_pred CCcEEEEccCCCCchhh
Q 006737 416 GKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 416 grDvLv~ApTGSGKTla 432 (633)
.+.+|++||+|+|||+.
T Consensus 41 ~~giLL~Gp~GtGKT~l 57 (265)
T d1r7ra3 41 SKGVLFYGPPGCGKTLL 57 (265)
T ss_dssp CCEEEEBCCTTSSHHHH
T ss_pred CCeEEEECCCCCcchhH
Confidence 36799999999999973
No 142
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=36.77 E-value=6.8 Score=36.33 Aligned_cols=43 Identities=9% Similarity=0.174 Sum_probs=31.7
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCCC--CcEEEEecc
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR--RQSLLFSAT 574 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~--~Q~IlfSAT 574 (633)
..+-++|++||-=.-+|......+..++..+.++ .-+|+.|--
T Consensus 161 ~~~P~lLllDEPTs~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd 205 (230)
T d1l2ta_ 161 ANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHD 205 (230)
T ss_dssp TTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred hcCCCEEEecCCccccCHHHHHHHHHHHHHHHHhhCCEEEEECCC
Confidence 3567899999999989988888888888877543 334554543
No 143
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.77 E-value=6.8 Score=35.00 Aligned_cols=18 Identities=17% Similarity=-0.049 Sum_probs=15.7
Q ss_pred CCCcEEEEccCCCCchhh
Q 006737 415 EGKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTla 432 (633)
.|+-+++.+++|+|||..
T Consensus 36 ~G~~~~i~G~~GsGKT~l 53 (258)
T d1v5wa_ 36 SMAITEAFGEFRTGKTQL 53 (258)
T ss_dssp SSEEEEEECCTTCTHHHH
T ss_pred CCEEEEEECCCCCCHHHH
Confidence 467899999999999974
No 144
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=36.62 E-value=7 Score=34.00 Aligned_cols=15 Identities=27% Similarity=0.348 Sum_probs=13.0
Q ss_pred cEEEEccCCCCchhh
Q 006737 418 DAVVKAKTGTGKSIA 432 (633)
Q Consensus 418 DvLv~ApTGSGKTla 432 (633)
-+++.||.|||||..
T Consensus 8 iI~i~G~pGSGKsT~ 22 (194)
T d1qf9a_ 8 VVFVLGGPGSGKGTQ 22 (194)
T ss_dssp EEEEEESTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 468899999999984
No 145
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=36.60 E-value=94 Score=24.52 Aligned_cols=84 Identities=8% Similarity=0.057 Sum_probs=48.1
Q ss_pred eEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHHHHhcCCCcEEEECchhhHHHHhcccCcccccCCe
Q 006737 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGL 535 (633)
Q Consensus 456 ~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~~l~~~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l 535 (633)
|++|||-.....+..+...+... |+.+..+ .++...+..+... .+
T Consensus 3 p~ILiVDDd~~~~~~l~~~L~~~-----g~~v~~a----------------------~~~~~al~~l~~~--------~~ 47 (121)
T d1xhfa1 3 PHILIVEDELVTRNTLKSIFEAE-----GYDVFEA----------------------TDGAEMHQILSEY--------DI 47 (121)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTT-----TCEEEEE----------------------SSHHHHHHHHHHS--------CC
T ss_pred CEEEEEECCHHHHHHHHHHHHHC-----CCEEEEE----------------------CChHHHHHHHHhc--------CC
Confidence 57889888888887766655543 3333222 2333334444432 46
Q ss_pred eEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChh
Q 006737 536 KMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE 578 (633)
Q Consensus 536 ~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~e 578 (633)
++||+| . .|.+.+=...+..+.+. .+.++|++|+.-...
T Consensus 48 dlii~D-~-~mp~~~G~~~~~~~r~~--~~~pii~lt~~~~~~ 86 (121)
T d1xhfa1 48 NLVIMD-I-NLPGKNGLLLARELREQ--ANVALMFLTGRDNEV 86 (121)
T ss_dssp SEEEEC-S-SCSSSCHHHHHHHHHHH--CCCEEEEEESCCSHH
T ss_pred CEEEee-c-ccCCccCcHHHHHHHhc--CCCcEEEEECCCCHH
Confidence 788888 2 23443323334444333 468899999976665
No 146
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=36.22 E-value=6.6 Score=34.73 Aligned_cols=20 Identities=15% Similarity=0.117 Sum_probs=16.3
Q ss_pred hCCCcEEEEccCCCCchhhh
Q 006737 414 LEGKDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 414 l~grDvLv~ApTGSGKTlay 433 (633)
..|.-+++.|++|+|||...
T Consensus 32 ~~G~l~~i~G~~G~GKT~~~ 51 (258)
T d2i1qa2 32 ESQSVTEFAGVFGSGKTQIM 51 (258)
T ss_dssp ETTEEEEEEESTTSSHHHHH
T ss_pred cCCeEEEEEeCCCCCHHHHH
Confidence 34678899999999999743
No 147
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=36.06 E-value=7.6 Score=33.53 Aligned_cols=16 Identities=25% Similarity=0.376 Sum_probs=13.5
Q ss_pred cEEEEccCCCCchhhh
Q 006737 418 DAVVKAKTGTGKSIAF 433 (633)
Q Consensus 418 DvLv~ApTGSGKTlay 433 (633)
.+++.||+|||||+..
T Consensus 2 ~I~i~G~pGSGKsT~a 17 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQA 17 (182)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3789999999999843
No 148
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.02 E-value=6.7 Score=34.27 Aligned_cols=16 Identities=25% Similarity=0.272 Sum_probs=13.2
Q ss_pred cEEEEccCCCCchhhh
Q 006737 418 DAVVKAKTGTGKSIAF 433 (633)
Q Consensus 418 DvLv~ApTGSGKTlay 433 (633)
-+++.||+|||||...
T Consensus 10 iI~i~GppGSGKsT~a 25 (196)
T d1ukza_ 10 VIFVLGGPGAGKGTQC 25 (196)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4788899999998743
No 149
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=35.84 E-value=1.4e+02 Score=26.23 Aligned_cols=37 Identities=8% Similarity=0.056 Sum_probs=24.2
Q ss_pred CCeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEe
Q 006737 533 MGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFS 572 (633)
Q Consensus 533 s~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfS 572 (633)
..-++|||=-+|.+.+ ...+...++.+++..+++-.+
T Consensus 149 ~~AD~ivlNK~Dl~~~---~~~~~~~l~~lNP~a~Ii~~~ 185 (222)
T d1nija1 149 GYADRILLTKTDVAGE---AEKLHERLARINARAPVYTVT 185 (222)
T ss_dssp HTCSEEEEECTTTCSC---THHHHHHHHHHCSSSCEEECC
T ss_pred HhCCcccccccccccH---HHHHHHHHHHHhCCCeEEEee
Confidence 3445688777776543 246677777788888876433
No 150
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=35.76 E-value=5.8 Score=34.25 Aligned_cols=16 Identities=19% Similarity=0.326 Sum_probs=13.8
Q ss_pred cEEEEccCCCCchhhh
Q 006737 418 DAVVKAKTGTGKSIAF 433 (633)
Q Consensus 418 DvLv~ApTGSGKTlay 433 (633)
++++.||.|||||+..
T Consensus 2 ~I~i~G~pGsGKsT~a 17 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQA 17 (181)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5789999999999843
No 151
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=35.52 E-value=6.3 Score=36.77 Aligned_cols=23 Identities=26% Similarity=0.341 Sum_probs=0.0
Q ss_pred HhCCCcEEEEccCCCCchhhhHH
Q 006737 413 CLEGKDAVVKAKTGTGKSIAFLL 435 (633)
Q Consensus 413 il~grDvLv~ApTGSGKTlaylL 435 (633)
+..|.-+.+++++|||||...-+
T Consensus 26 i~~Ge~vaIvG~sGsGKSTLl~l 48 (241)
T d2pmka1 26 IKQGEVIGIVGRSGSGKSTLTKL 48 (241)
T ss_dssp EETTCEEEEECSTTSSHHHHHHH
T ss_pred EcCCCEEEEECCCCCCHHHHHHH
No 152
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=34.85 E-value=8.6 Score=33.34 Aligned_cols=18 Identities=33% Similarity=0.453 Sum_probs=14.6
Q ss_pred CCcEEEEccCCCCchhhh
Q 006737 416 GKDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 416 grDvLv~ApTGSGKTlay 433 (633)
|--+++.||+|||||+..
T Consensus 3 ~~riil~G~pGSGKsT~a 20 (190)
T d1ak2a1 3 GVRAVLLGPPGAGKGTQA 20 (190)
T ss_dssp CCEEEEECCTTSSHHHHH
T ss_pred ccEEEEECCCCCCHHHHH
Confidence 446788999999999854
No 153
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=34.78 E-value=81 Score=28.02 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=58.1
Q ss_pred CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHHH---
Q 006737 425 TGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQR--- 501 (633)
Q Consensus 425 TGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~~--- 501 (633)
..|||... ++-++..+...+ -++||.+..++-..-+...+...+ ++.+..++|+.+......
T Consensus 66 ~~S~K~~~-l~~~l~~~~~~g----------~kviIFs~~~~~~~~l~~~l~~~~----~~~~~~i~G~~~~~~R~~~i~ 130 (244)
T d1z5za1 66 RRSGKMIR-TMEIIEEALDEG----------DKIAIFTQFVDMGKIIRNIIEKEL----NTEVPFLYGELSKKERDDIIS 130 (244)
T ss_dssp TTCHHHHH-HHHHHHHHHHTT----------CCEEEEESCHHHHHHHHHHHHHHH----CSCCCEECTTSCHHHHHHHHH
T ss_pred hhhhHHHH-HHHHHHhhcccc----------cceEEEeeceehHHHHHHHHHhhc----cceEEEEecccchhccchhhh
Confidence 45777643 455555443332 248999988887766555554443 566777899987654332
Q ss_pred HHhc-CCCcEEEECchhhHHHHhcccCcccccCCeeEEEEeccc
Q 006737 502 RLES-DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEAD 544 (633)
Q Consensus 502 ~l~~-~~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDEAD 544 (633)
.+.. ..+.++|+|+... +..++|....++|+=+.+
T Consensus 131 ~F~~~~~~~vll~~~~~~--------g~Glnl~~a~~vi~~~~~ 166 (244)
T d1z5za1 131 KFQNNPSVKFIVLSVKAG--------GFGINLTSANRVIHFDRW 166 (244)
T ss_dssp HHHHCTTCCEEEEECCTT--------CCCCCCTTCSEEEECSCC
T ss_pred hhhccccchhcccccccc--------ccccccchhhhhhhcCch
Confidence 2322 3467888887542 224667777777655443
No 154
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.59 E-value=6.8 Score=36.72 Aligned_cols=41 Identities=29% Similarity=0.391 Sum_probs=30.2
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCCC-CcEEEEe
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-RQSLLFS 572 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~-~Q~IlfS 572 (633)
+.+-+++|+||.=.-+|......+..++..+.+. -.++++-
T Consensus 167 ~~~p~ililDEpTs~LD~~~~~~i~~~l~~l~~~~~~Tvi~i 208 (251)
T d1jj7a_ 167 IRKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLI 208 (251)
T ss_dssp TTCCSEEEEESTTTTCCHHHHHHHHHHHHTCGGGGGCEEEEE
T ss_pred ccCCcEEEecCcCcccChhhHHHHHHHHHHHhhhcCCEEEEE
Confidence 5667899999999989887778888888776542 2344443
No 155
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=34.24 E-value=7.3 Score=33.47 Aligned_cols=16 Identities=13% Similarity=0.133 Sum_probs=13.5
Q ss_pred cEEEEccCCCCchhhh
Q 006737 418 DAVVKAKTGTGKSIAF 433 (633)
Q Consensus 418 DvLv~ApTGSGKTlay 433 (633)
.+++.||.|||||+..
T Consensus 2 ~I~i~G~pGSGKsT~~ 17 (179)
T d1e4va1 2 RIILLGAPVAGKGTQA 17 (179)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4788999999999853
No 156
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.69 E-value=23 Score=30.77 Aligned_cols=23 Identities=13% Similarity=0.291 Sum_probs=17.8
Q ss_pred CcEEEEccCCCCchhhhHHHHHHHHHHh
Q 006737 417 KDAVVKAKTGTGKSIAFLLPAIEAVLKA 444 (633)
Q Consensus 417 rDvLv~ApTGSGKTlaylLPiL~~l~~~ 444 (633)
|+|++.|++|+|||. +++++...
T Consensus 1 k~V~ivG~~~~GKTs-----Ll~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTL-----LFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHH-----HHHHHHHS
T ss_pred CEEEEECCCCCCHHH-----HHHHHHcC
Confidence 579999999999997 34555544
No 157
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=33.46 E-value=9.8 Score=33.18 Aligned_cols=20 Identities=25% Similarity=0.258 Sum_probs=16.3
Q ss_pred HhCCCcEEEEccCCCCchhh
Q 006737 413 CLEGKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 413 il~grDvLv~ApTGSGKTla 432 (633)
+...+-+++.||+|||||..
T Consensus 5 ~~~~~iI~l~G~pGSGKsT~ 24 (194)
T d3adka_ 5 LKKSKIIFVVGGPGSGKGTQ 24 (194)
T ss_dssp HHTSCEEEEEECTTSSHHHH
T ss_pred ccCCcEEEEECCCCCCHHHH
Confidence 34566788999999999984
No 158
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=33.35 E-value=10 Score=35.06 Aligned_cols=21 Identities=14% Similarity=0.344 Sum_probs=17.0
Q ss_pred HHhCCCcEEEEccCCCCchhh
Q 006737 412 ACLEGKDAVVKAKTGTGKSIA 432 (633)
Q Consensus 412 ~il~grDvLv~ApTGSGKTla 432 (633)
.......|++.|++|||||++
T Consensus 19 ~a~~~~pvlI~Ge~GtGK~~~ 39 (247)
T d1ny5a2 19 ISCAECPVLITGESGVGKEVV 39 (247)
T ss_dssp HTTCCSCEEEECSTTSSHHHH
T ss_pred HhCCCCCEEEECCCCcCHHHH
Confidence 344567899999999999974
No 159
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=33.20 E-value=7.1 Score=33.93 Aligned_cols=15 Identities=20% Similarity=0.186 Sum_probs=13.0
Q ss_pred EEEEccCCCCchhhh
Q 006737 419 AVVKAKTGTGKSIAF 433 (633)
Q Consensus 419 vLv~ApTGSGKTlay 433 (633)
++++|.+|||||..+
T Consensus 5 i~l~GlpgsGKSTla 19 (213)
T d1bifa1 5 IVMVGLPARGKTYIS 19 (213)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 678899999999854
No 160
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=31.82 E-value=3.1 Score=35.43 Aligned_cols=23 Identities=26% Similarity=0.391 Sum_probs=16.3
Q ss_pred EEEEccCCCCchhhhHHHHHHHHHH
Q 006737 419 AVVKAKTGTGKSIAFLLPAIEAVLK 443 (633)
Q Consensus 419 vLv~ApTGSGKTlaylLPiL~~l~~ 443 (633)
.+++|++|||||. +|-++..++.
T Consensus 27 tvi~G~NGsGKSt--il~Ai~~~L~ 49 (222)
T d1qhla_ 27 TTLSGGNGAGKST--TMAAFVTALI 49 (222)
T ss_dssp HHHHSCCSHHHHH--HHHHHHHHHS
T ss_pred EEEECCCCCCHHH--HHHHHHHHhc
Confidence 3567999999998 4555555553
No 161
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=31.58 E-value=9.7 Score=35.76 Aligned_cols=45 Identities=20% Similarity=0.258 Sum_probs=28.9
Q ss_pred CCeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhh
Q 006737 533 MGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL 579 (633)
Q Consensus 533 s~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el 579 (633)
..-.++++||.+.-+.......+..++..+.++.|+|+. |-.+.+
T Consensus 245 ~~~~~~~ide~e~~L~~~~~~~l~~~l~~~~~~~Q~iit--Th~~~~ 289 (329)
T g1xew.1 245 KPAPFYLFDEIDAHLDDANVKRVADLIKESSKESQFIVI--TLRDVM 289 (329)
T ss_dssp SCCSEEEEESTTTTSCHHHHHHHHHHHHHHTTTSEEEEE--CCCHHH
T ss_pred cccchhhhhhHHhhcCHHHHHHHHHHHHHhccCCeEEEE--eCCHHH
Confidence 344578888888777654455566666666677888764 444443
No 162
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=31.35 E-value=8 Score=36.24 Aligned_cols=41 Identities=32% Similarity=0.472 Sum_probs=30.0
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEe
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFS 572 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfS 572 (633)
+.+-++||+||.-.-+|......+..++..+.++.-+|+.|
T Consensus 168 ~~~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~it 208 (253)
T d3b60a1 168 LRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIA 208 (253)
T ss_dssp HHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEEC
T ss_pred hcCCCEEEeccccccCCHHHHHHHHHHHHHhccCCEEEEEE
Confidence 34567999999999999877788888877765555444444
No 163
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.33 E-value=10 Score=32.87 Aligned_cols=15 Identities=27% Similarity=0.375 Sum_probs=13.0
Q ss_pred EEEEccCCCCchhhh
Q 006737 419 AVVKAKTGTGKSIAF 433 (633)
Q Consensus 419 vLv~ApTGSGKTlay 433 (633)
+++.||+|||||+..
T Consensus 4 I~i~GppGSGKsT~a 18 (194)
T d1teva_ 4 VFVLGGPGAGKGTQC 18 (194)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 688999999999854
No 164
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=31.11 E-value=9.3 Score=35.60 Aligned_cols=42 Identities=24% Similarity=0.339 Sum_probs=30.7
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCCC-CcEEEEec
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-RQSLLFSA 573 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~-~Q~IlfSA 573 (633)
..+-++||+||-=.-+|......+..++..+.+. --++++..
T Consensus 156 ~~~P~lLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vT 198 (240)
T d3dhwc1 156 ASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLIT 198 (240)
T ss_dssp HTCCSEEEEESGGGSSCHHHHHHHHHHHHHHHHHHCCEEEEEB
T ss_pred ccCCCeEEeccccccCCHHHhhHHHHHHHHHHhccCCEEEEEc
Confidence 3456799999999999988888888888877543 33444433
No 165
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.99 E-value=50 Score=30.82 Aligned_cols=90 Identities=23% Similarity=0.208 Sum_probs=53.3
Q ss_pred HHhCCCcEEEEccCC-CCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEE
Q 006737 412 ACLEGKDAVVKAKTG-TGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490 (633)
Q Consensus 412 ~il~grDvLv~ApTG-SGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l 490 (633)
-.|.||-+||.+.++ -|+.+|. .+... +.+++++.-..+-..+..+++........+.++..+
T Consensus 8 g~L~gKvalITGas~GIG~aia~------~la~~----------Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~ 71 (297)
T d1yxma1 8 GLLQGQVAIVTGGATGIGKAIVK------ELLEL----------GSNVVIASRKLERLKSAADELQANLPPTKQARVIPI 71 (297)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHH------HHHHT----------TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHH------HHHHC----------CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEE
Confidence 358899999876543 3544432 23333 235777776767777776666654433335667777
Q ss_pred ECCccchHHHHHHh------cCCCcEEEECchh
Q 006737 491 VGGTRFKVDQRRLE------SDPCQILVATPGR 517 (633)
Q Consensus 491 ~Gg~~~~~~~~~l~------~~~~dILIaTPgr 517 (633)
..+.....+...+. .+..||||...+.
T Consensus 72 ~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~ 104 (297)
T d1yxma1 72 QCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG 104 (297)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred eccCCCHHHHHHHHHHHHHHhCCeEEEEeeccc
Confidence 77766554433322 2468999976543
No 166
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.98 E-value=9.2 Score=36.35 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=25.3
Q ss_pred cCCeeEEEEecccccCCcChHHHHHH-HHHHCCCCCcEEEEecc
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVEN-IVDCLPRRRQSLLFSAT 574 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~-Il~~lpk~~Q~IlfSAT 574 (633)
+.+-++||+||.=.-+|......+.. ++..+..+ .++++.+.
T Consensus 174 ~~~p~illLDEPts~LD~~~~~~i~~~~~~~~~~~-~tvi~itH 216 (281)
T d1r0wa_ 174 YKDADLYLLDSPFGYLDVFTEEQVFESCVCKLMAN-KTRILVTS 216 (281)
T ss_dssp HSCCSEEEEESCCCSSCHHHHHHHHHHCCCCCTTT-SEEEEECS
T ss_pred HhCccchhhcCccccCCHHHHHHHHHHHHHHhhCC-CEEEEEec
Confidence 56778999999988887644444433 33333333 45555443
No 167
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=30.93 E-value=8.9 Score=34.44 Aligned_cols=43 Identities=16% Similarity=0.244 Sum_probs=30.5
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEecc
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSAT 574 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSAT 574 (633)
+.+-+++|+||--.-+|......+.+.+..+.++..+++++.+
T Consensus 141 ~~~~~llllDEPt~gLD~~~~~~i~~~l~~~~~~~~~~ii~~~ 183 (200)
T d1sgwa_ 141 LVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKGIVIISSR 183 (200)
T ss_dssp TSCCSEEEEESTTTTSCTTTHHHHHHHHHHHHHHHSEEEEEES
T ss_pred hcCCCEEEEcCcccccCHHHHHHHHHHHHHHHhCCCEEEEEEe
Confidence 5678899999998888887776666555544444456666665
No 168
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=30.86 E-value=11 Score=31.98 Aligned_cols=17 Identities=35% Similarity=0.319 Sum_probs=14.1
Q ss_pred cEEEEccCCCCchhhhH
Q 006737 418 DAVVKAKTGTGKSIAFL 434 (633)
Q Consensus 418 DvLv~ApTGSGKTlayl 434 (633)
.+++.|+.|+|||...-
T Consensus 3 ~IvliG~~G~GKSTig~ 19 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGR 19 (165)
T ss_dssp SEEEECSTTSSHHHHHH
T ss_pred cEEEECCCCCCHHHHHH
Confidence 57888999999998643
No 169
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=30.45 E-value=23 Score=29.67 Aligned_cols=13 Identities=23% Similarity=0.153 Sum_probs=11.3
Q ss_pred EEEEccCCCCchh
Q 006737 419 AVVKAKTGTGKSI 431 (633)
Q Consensus 419 vLv~ApTGSGKTl 431 (633)
+-|+|..|||||.
T Consensus 4 i~I~G~~gSGKTT 16 (165)
T d1xjca_ 4 WQVVGYKHSGKTT 16 (165)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEEeCCCCCHHH
Confidence 3489999999997
No 170
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=30.43 E-value=11 Score=33.21 Aligned_cols=16 Identities=25% Similarity=0.399 Sum_probs=13.8
Q ss_pred cEEEEccCCCCchhhh
Q 006737 418 DAVVKAKTGTGKSIAF 433 (633)
Q Consensus 418 DvLv~ApTGSGKTlay 433 (633)
.+++.||+|||||...
T Consensus 8 rIiliG~PGSGKtT~a 23 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVS 23 (189)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 6889999999999854
No 171
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=30.40 E-value=7.8 Score=36.07 Aligned_cols=42 Identities=36% Similarity=0.385 Sum_probs=29.7
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEecc
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSAT 574 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSAT 574 (633)
+.+-++||+||.-.-+|......+..++..+.+++ ++++.+-
T Consensus 155 ~~~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~-Tvi~itH 196 (242)
T d1mv5a_ 155 LRNPKILMLDEATASLDSESESMVQKALDSLMKGR-TTLVIAH 196 (242)
T ss_dssp HHCCSEEEEECCSCSSCSSSCCHHHHHHHHHHTTS-EEEEECC
T ss_pred hcCCCEEEecCCccccCHHHHHHHHHHHHHHcCCC-EEEEEEC
Confidence 34567899999999888877777777777665544 5555443
No 172
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.03 E-value=8.5 Score=34.03 Aligned_cols=18 Identities=0% Similarity=0.071 Sum_probs=12.9
Q ss_pred cCCeeEEEEecccccCCc
Q 006737 532 LMGLKMLVLDEADHLLDL 549 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~ 549 (633)
...-.++||++.+.+.+.
T Consensus 108 ~~~~~~iiveg~~~l~~~ 125 (213)
T d1uj2a_ 108 VYPADVVLFEGILAFYSQ 125 (213)
T ss_dssp ECCCSEEEEECTTTTSSH
T ss_pred ecccceEEecchhhhccH
Confidence 345567999999887653
No 173
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.67 E-value=11 Score=32.40 Aligned_cols=16 Identities=25% Similarity=0.343 Sum_probs=13.3
Q ss_pred cEEEEccCCCCchhhh
Q 006737 418 DAVVKAKTGTGKSIAF 433 (633)
Q Consensus 418 DvLv~ApTGSGKTlay 433 (633)
-+++.||.|||||+..
T Consensus 4 rIvl~G~pGSGKtT~a 19 (180)
T d1akya1 4 RMVLIGPPGAGKGTQA 19 (180)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3788899999999843
No 174
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=29.66 E-value=8.3 Score=36.24 Aligned_cols=21 Identities=24% Similarity=0.335 Sum_probs=0.0
Q ss_pred HhCCCcEEEEccCCCCchhhh
Q 006737 413 CLEGKDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 413 il~grDvLv~ApTGSGKTlay 433 (633)
+..|.-+.+++++|||||...
T Consensus 41 i~~Ge~vaivG~sGsGKSTLl 61 (255)
T d2hyda1 41 IEKGETVAFVGMSGGGKSTLI 61 (255)
T ss_dssp ECTTCEEEEECSTTSSHHHHH
T ss_pred EcCCCEEEEECCCCCcHHHHH
No 175
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=29.65 E-value=11 Score=34.86 Aligned_cols=47 Identities=17% Similarity=0.248 Sum_probs=31.0
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCC-CCcEEEEeccCChh
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR-RRQSLLFSATMPKE 578 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk-~~Q~IlfSATl~~e 578 (633)
+.+-++|++||-=.-+|......+..++..+.+ .-.++++..--..+
T Consensus 146 ~~~P~illlDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~~~ 193 (232)
T d2awna2 146 VAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVE 193 (232)
T ss_dssp HTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHSCCEEEEEESCHHH
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 456679999999998888777777777766533 23455554433333
No 176
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=29.50 E-value=19 Score=33.69 Aligned_cols=21 Identities=19% Similarity=0.226 Sum_probs=16.8
Q ss_pred CCCcEEEEccCCCCchhhhHH
Q 006737 415 EGKDAVVKAKTGTGKSIAFLL 435 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTlaylL 435 (633)
.|+-+.+.+++|+|||...+-
T Consensus 53 ~g~itei~G~~gsGKTtl~l~ 73 (263)
T d1u94a1 53 MGRIVEIYGPESSGKTTLTLQ 73 (263)
T ss_dssp TTSEEEEECSTTSSHHHHHHH
T ss_pred CceEEEEecCCCcHHHHHHHH
Confidence 457889999999999976433
No 177
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=29.49 E-value=1.3e+02 Score=23.81 Aligned_cols=42 Identities=14% Similarity=0.061 Sum_probs=26.8
Q ss_pred CeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChh
Q 006737 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE 578 (633)
Q Consensus 534 ~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~e 578 (633)
.+++||+|- .|.+.+-...+.. +...++..+++++|+.-..+
T Consensus 46 ~~dliilD~--~mp~~~G~~~~~~-i~~~~~~~~ii~lt~~~~~~ 87 (128)
T d1yioa2 46 QHGCLVLDM--RMPGMSGIELQEQ-LTAISDGIPIVFITAHGDIP 87 (128)
T ss_dssp SCEEEEEES--CCSSSCHHHHHHH-HHHTTCCCCEEEEESCTTSC
T ss_pred CCCEeehhh--hcccchhHHHHHH-HHhhCCCCeEEEEEEECCHH
Confidence 577899994 3444443344444 45566788999999875444
No 178
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=29.27 E-value=21 Score=31.36 Aligned_cols=13 Identities=31% Similarity=0.562 Sum_probs=11.9
Q ss_pred EEEEccCCCCchh
Q 006737 419 AVVKAKTGTGKSI 431 (633)
Q Consensus 419 vLv~ApTGSGKTl 431 (633)
+++.|+.|+|||.
T Consensus 3 i~v~G~~GsGKTT 15 (244)
T d1yrba1 3 VVFVGTAGSGKTT 15 (244)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEEcCCCCcHHH
Confidence 6789999999997
No 179
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=29.15 E-value=1.5e+02 Score=28.18 Aligned_cols=95 Identities=17% Similarity=0.167 Sum_probs=55.6
Q ss_pred CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECCccchHHH---H
Q 006737 425 TGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ---R 501 (633)
Q Consensus 425 TGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg~~~~~~~---~ 501 (633)
-.|||.. .+.-++..+.... +-++||++-.+....-+...+... ++.+..+.|+++..... .
T Consensus 98 ~~S~Kl~-~L~~ll~~~~~~~---------g~KvlIFs~~~~~ld~l~~~l~~~-----g~~~~~l~G~~~~~~R~~~i~ 162 (346)
T d1z3ix1 98 QLSGKML-VLDYILAMTRTTT---------SDKVVLVSNYTQTLDLFEKLCRNR-----RYLYVRLDGTMSIKKRAKIVE 162 (346)
T ss_dssp GGSHHHH-HHHHHHHHHHHHC---------CCEEEEEESCHHHHHHHHHHHHHH-----TCCEEEECSSCCHHHHHHHHH
T ss_pred ccCHHHH-HHHHHHHHHHHhc---------CCceeEEeehhhhhHHHHHHHhhh-----hccccccccchhHHHHHHHHH
Confidence 3477864 3344444433221 136999998887766555555544 77888999998765433 2
Q ss_pred HHhcC--CCcEEEECchhhHHHHhcccCcccccCCeeEEEEec
Q 006737 502 RLESD--PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDE 542 (633)
Q Consensus 502 ~l~~~--~~dILIaTPgrLl~lL~~~~~~~~~Ls~l~~LVIDE 542 (633)
.+... +..|+++++.. .+..++|.....||+=+
T Consensus 163 ~F~~~~~~~~vlLls~~a--------gg~GlnL~~a~~vi~~d 197 (346)
T d1z3ix1 163 RFNNPSSPEFIFMLSSKA--------GGCGLNLIGANRLVMFD 197 (346)
T ss_dssp HHHSTTCCCCEEEEEGGG--------SCTTCCCTTEEEEEECS
T ss_pred hhhcccccceeeeecchh--------hhhccccccceEEEEec
Confidence 33332 23466666432 22346677777777654
No 180
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.94 E-value=69 Score=28.86 Aligned_cols=83 Identities=20% Similarity=0.203 Sum_probs=52.0
Q ss_pred hCCCcEEEEccCC-CCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEEC
Q 006737 414 LEGKDAVVKAKTG-TGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492 (633)
Q Consensus 414 l~grDvLv~ApTG-SGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~G 492 (633)
+.||-+||.+.++ -|+.+|..+ .+. +.+++++.-+.+-+.++.+++... +-++..+..
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~l------a~~----------G~~V~l~~r~~~~l~~~~~~~~~~-----~~~~~~~~~ 63 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEF------AKL----------KSKLVLWDINKHGLEETAAKCKGL-----GAKVHTFVV 63 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHH------HHT----------TCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEEC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHH------HHC----------CCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEe
Confidence 5788888876664 587776543 222 246888888888777777777654 334555556
Q ss_pred CccchHHHHHH------hcCCCcEEEECchh
Q 006737 493 GTRFKVDQRRL------ESDPCQILVATPGR 517 (633)
Q Consensus 493 g~~~~~~~~~l------~~~~~dILIaTPgr 517 (633)
+.........+ ..+..||+|...+.
T Consensus 64 Dvs~~~~v~~~~~~i~~~~g~idilinnag~ 94 (244)
T d1yb1a_ 64 DCSNREDIYSSAKKVKAEIGDVSILVNNAGV 94 (244)
T ss_dssp CTTCHHHHHHHHHHHHHHTCCCSEEEECCCC
T ss_pred eCCCHHHHHHHHHHHHHHcCCCceeEeeccc
Confidence 65544433322 23568999987654
No 181
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=28.24 E-value=8.5 Score=37.12 Aligned_cols=16 Identities=25% Similarity=0.254 Sum_probs=13.7
Q ss_pred cEEEEccCCCCchhhh
Q 006737 418 DAVVKAKTGTGKSIAF 433 (633)
Q Consensus 418 DvLv~ApTGSGKTlay 433 (633)
.++++||||+|||...
T Consensus 55 ~~lf~Gp~G~GKt~la 70 (315)
T d1qvra3 55 SFLFLGPTGVGKTELA 70 (315)
T ss_dssp EEEEBSCSSSSHHHHH
T ss_pred EEEEECCCcchHHHHH
Confidence 5789999999999843
No 182
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=27.45 E-value=20 Score=32.28 Aligned_cols=40 Identities=28% Similarity=0.405 Sum_probs=29.8
Q ss_pred CCeeEEEEecccccCCcChHHHHHHHHHHCCCC-CcEEEEe
Q 006737 533 MGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-RQSLLFS 572 (633)
Q Consensus 533 s~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~-~Q~IlfS 572 (633)
....+|||||...-|+......+..++..+.+. .|+|+.|
T Consensus 224 ~~~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~~~qviv~T 264 (292)
T g1f2t.1 224 GEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVS 264 (292)
T ss_dssp SSCSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEE
T ss_pred CCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 456689999999888877777777788777543 5766653
No 183
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=27.31 E-value=10 Score=36.55 Aligned_cols=18 Identities=28% Similarity=0.449 Sum_probs=14.6
Q ss_pred CCCc--EEEEccCCCCchhh
Q 006737 415 EGKD--AVVKAKTGTGKSIA 432 (633)
Q Consensus 415 ~grD--vLv~ApTGSGKTla 432 (633)
+|.+ +++.|+||||||..
T Consensus 82 ~G~n~~i~aYGqTGSGKTyT 101 (330)
T d1ry6a_ 82 NGCVCSCFAYGQTGSGKTYT 101 (330)
T ss_dssp HCCEEEEEEECCTTSSHHHH
T ss_pred cCCCeEEEeeecccccccee
Confidence 5765 57779999999986
No 184
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=26.97 E-value=19 Score=34.32 Aligned_cols=23 Identities=17% Similarity=0.408 Sum_probs=12.9
Q ss_pred EEEEccCCCCchhhhHHHHHHHHHH
Q 006737 419 AVVKAKTGTGKSIAFLLPAIEAVLK 443 (633)
Q Consensus 419 vLv~ApTGSGKTlaylLPiL~~l~~ 443 (633)
+-|+|++|||||.. .-.|.+++.
T Consensus 7 IgIaG~SGSGKTTv--a~~l~~i~~ 29 (288)
T d1a7ja_ 7 ISVTGSSGAGTSTV--KHTFDQIFR 29 (288)
T ss_dssp EEEESCC---CCTH--HHHHHHHHH
T ss_pred EEEECCCCCcHHHH--HHHHHHHHh
Confidence 56889999999984 334444444
No 185
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=26.51 E-value=22 Score=30.57 Aligned_cols=18 Identities=33% Similarity=0.355 Sum_probs=13.2
Q ss_pred CcEEEEcc-CCCCchhhhH
Q 006737 417 KDAVVKAK-TGTGKSIAFL 434 (633)
Q Consensus 417 rDvLv~Ap-TGSGKTlayl 434 (633)
|.++|++- ||.|||.+-+
T Consensus 2 ~~~~i~gt~~GVGKTtvs~ 20 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASC 20 (224)
T ss_dssp EEEEEEESSTTSCHHHHHH
T ss_pred ceEEEEECCCCccHHHHHH
Confidence 34677777 6999998643
No 186
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=26.07 E-value=10 Score=36.80 Aligned_cols=42 Identities=10% Similarity=0.348 Sum_probs=24.3
Q ss_pred eEEEEecccccCCcC--------hHHHHHHHHHHC---CCCCcEEEEeccCCh
Q 006737 536 KMLVLDEADHLLDLG--------FRKDVENIVDCL---PRRRQSLLFSATMPK 577 (633)
Q Consensus 536 ~~LVIDEAD~Lld~g--------f~~~l~~Il~~l---pk~~Q~IlfSATl~~ 577 (633)
.+|+|||+|.+.... -...+..++..+ .....++++-||.+.
T Consensus 184 ~ilf~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~~~~v~viaatN~~ 236 (321)
T d1w44a_ 184 RVIVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAASRGCVVIASLNPT 236 (321)
T ss_dssp SEEEEECCTTTC-----------CCHHHHHHHHHHHHHHHHHTCEEEEECCCC
T ss_pred cEEEeehhhhhccccccCCCCCcchhhhhhhhhhccccccCCCeEEEEeCCCc
Confidence 389999999996321 112334443322 223457888899864
No 187
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=26.05 E-value=14 Score=34.36 Aligned_cols=46 Identities=15% Similarity=0.193 Sum_probs=32.2
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCC--CCcEEEEeccCCh
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR--RRQSLLFSATMPK 577 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk--~~Q~IlfSATl~~ 577 (633)
..+-++|++||--.-+|......+..++..+.+ ..-+|+.|--+..
T Consensus 155 ~~~P~iLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHd~~~ 202 (240)
T d1g2912 155 VRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVE 202 (240)
T ss_dssp HTCCSEEEEECTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHH
T ss_pred hcCCCEEEecCCCcccCHHHHHHHHHHHHHHHhccCCEEEEEcCCHHH
Confidence 456789999999999998888888888776643 3434444444433
No 188
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.34 E-value=15 Score=35.38 Aligned_cols=14 Identities=29% Similarity=0.420 Sum_probs=12.1
Q ss_pred EEEEccCCCCchhh
Q 006737 419 AVVKAKTGTGKSIA 432 (633)
Q Consensus 419 vLv~ApTGSGKTla 432 (633)
.+++|++|||||..
T Consensus 28 ~~i~G~NGsGKS~i 41 (427)
T d1w1wa_ 28 TSIIGPNGSGKSNM 41 (427)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 47889999999984
No 189
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=25.25 E-value=1.4e+02 Score=23.14 Aligned_cols=43 Identities=9% Similarity=0.212 Sum_probs=27.2
Q ss_pred CeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhh
Q 006737 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL 579 (633)
Q Consensus 534 ~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el 579 (633)
..++||+| . .|.+.+=...+..+.+ ..++.++|++|+.-..+.
T Consensus 46 ~~dliilD-~-~mp~~~G~e~~~~ir~-~~~~~pvi~ls~~~~~~~ 88 (118)
T d1u0sy_ 46 KPDIVTMD-I-TMPEMNGIDAIKEIMK-IDPNAKIIVCSAMGQQAM 88 (118)
T ss_dssp CCSEEEEE-C-SCGGGCHHHHHHHHHH-HCTTCCEEEEECTTCHHH
T ss_pred cCCEEEEe-c-CCCCCCHHHHHHHHHH-hCCCCcEEEEEccCCHHH
Confidence 46789998 3 3444443445555544 445788999998866653
No 190
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=25.24 E-value=1.5e+02 Score=23.18 Aligned_cols=43 Identities=14% Similarity=0.058 Sum_probs=27.1
Q ss_pred CeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhh
Q 006737 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL 579 (633)
Q Consensus 534 ~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el 579 (633)
..++||+|= .|.+.+-...+..+ ...+...++|++||.-....
T Consensus 45 ~~dlillD~--~mp~~~g~~~~~~l-r~~~~~~piI~lt~~~~~~~ 87 (122)
T d1kgsa2 45 PFDVVILDI--MLPVHDGWEILKSM-RESGVNTPVLMLTALSDVEY 87 (122)
T ss_dssp CCSEEEEES--CCSSSCHHHHHHHH-HHTTCCCCEEEEESSCHHHH
T ss_pred Ccccccccc--ccccchhHHHHHHH-HhcCCCCcEEEEcCCCCHHH
Confidence 466788882 34444433444444 44556789999999876653
No 191
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=24.94 E-value=18 Score=32.95 Aligned_cols=22 Identities=41% Similarity=0.531 Sum_probs=0.0
Q ss_pred EEEEccCCCCchhhhHHHHHHHHH
Q 006737 419 AVVKAKTGTGKSIAFLLPAIEAVL 442 (633)
Q Consensus 419 vLv~ApTGSGKTlaylLPiL~~l~ 442 (633)
.+++|++|||||. +|=++..++
T Consensus 26 ~vi~G~NgsGKTt--ileAI~~~l 47 (369)
T g1ii8.1 26 NLIIGQNGSGKSS--LLDAILVGL 47 (369)
T ss_dssp EEEECCTTSSHHH--HHHHHHHHH
T ss_pred EEEECCCCCCHHH--HHHHHHHHH
No 192
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=24.87 E-value=15 Score=34.04 Aligned_cols=45 Identities=16% Similarity=0.236 Sum_probs=31.6
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCC--CCcEEEEeccCC
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR--RRQSLLFSATMP 576 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk--~~Q~IlfSATl~ 576 (633)
..+-++|++||-=.-+|......+..++..+.+ ..-+|+.|--+.
T Consensus 152 ~~~P~iLllDEPts~LD~~~~~~i~~ll~~l~~~~g~tii~vTHd~~ 198 (239)
T d1v43a3 152 VVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQV 198 (239)
T ss_dssp TTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHH
T ss_pred ccCCCceeecCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCHH
Confidence 456789999999999988878888888777643 333444444343
No 193
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=24.69 E-value=19 Score=32.48 Aligned_cols=14 Identities=29% Similarity=0.527 Sum_probs=12.3
Q ss_pred EEEEccCCCCchhh
Q 006737 419 AVVKAKTGTGKSIA 432 (633)
Q Consensus 419 vLv~ApTGSGKTla 432 (633)
.+++|++|+|||.+
T Consensus 26 n~IvG~NGsGKSti 39 (292)
T g1f2t.1 26 NLIIGQNGSGKSSL 39 (292)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 37999999999984
No 194
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=24.65 E-value=1.5e+02 Score=23.16 Aligned_cols=43 Identities=9% Similarity=0.013 Sum_probs=28.1
Q ss_pred CeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhh
Q 006737 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL 579 (633)
Q Consensus 534 ~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el 579 (633)
..++||+| -.|.+..=...+..+.+. .+..++|++||.-..+.
T Consensus 47 ~~dlii~D--~~mp~~~G~el~~~l~~~-~~~~piI~~t~~~~~~~ 89 (123)
T d1krwa_ 47 TPDVLLSD--IRMPGMDGLALLKQIKQR-HPMLPVIIMTAHSDLDA 89 (123)
T ss_dssp CCSEEEEC--CSSSSSTTHHHHHHHHHH-SSSCCEEESCCCSCHHH
T ss_pred CCCEEEeh--hhcCCchHHHHHHHHHHh-CCCCeEEEEecCCCHHH
Confidence 46788888 235544434445555554 45788999999877663
No 195
>d1q9ca_ a.22.1.3 (A:) Histone domain of Son of sevenless protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.38 E-value=10 Score=33.64 Aligned_cols=26 Identities=23% Similarity=0.563 Sum_probs=17.4
Q ss_pred ccCCCCcchhHHHHhHHHHHHHHHHH
Q 006737 32 RTFPGGLNKWQWKRMHEKKAKEKEKR 57 (633)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (633)
+||||.+.||-|+-++++..+...|+
T Consensus 71 ~~fp~~i~~~ai~~a~~~~~srs~ra 96 (172)
T d1q9ca_ 71 KSFPHPIDKWAIADAQSAIEKRKRRN 96 (172)
T ss_dssp HSSCTTHHHHHHHHHHHHHC------
T ss_pred HhCCchHHHHHHHHHHHHHhcccccc
Confidence 36999999999998887776555443
No 196
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=24.08 E-value=29 Score=31.35 Aligned_cols=43 Identities=23% Similarity=0.147 Sum_probs=27.9
Q ss_pred HHHHHHHHHcCCCCCcHHHHHHHHHHhCC----CcEEEEccCCCCchhh
Q 006737 388 PLTIKALTAAGYIQMTRVQEATLSACLEG----KDAVVKAKTGTGKSIA 432 (633)
Q Consensus 388 ~~Ll~~L~~~g~~~pt~iQ~~aIp~il~g----rDvLv~ApTGSGKTla 432 (633)
..|++-|+..|+.-..= ..++..++.| +-+++.||.++|||+.
T Consensus 23 ~~I~~~l~~q~i~~~~F--l~~l~~~l~~~PKkn~i~~~GP~~TGKS~f 69 (205)
T d1tuea_ 23 RPIVQFLRYQQIEFITF--LGALKSFLKGTPKKNCLVFCGPANTGKSYF 69 (205)
T ss_dssp HHHHHHHHHTTCCHHHH--HHHHHHHHHTCTTCSEEEEESCGGGCHHHH
T ss_pred HHHHHHHHhcCccHHHH--HHHHHHHHcCCCCceEEEEECCCCccHHHH
Confidence 56777777776653211 2334444544 3678899999999974
No 197
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.61 E-value=19 Score=34.58 Aligned_cols=40 Identities=23% Similarity=0.231 Sum_probs=28.8
Q ss_pred CCeeEEEEecccccCCcChHHHHHHHHHHC-CCCCcEEEEe
Q 006737 533 MGLKMLVLDEADHLLDLGFRKDVENIVDCL-PRRRQSLLFS 572 (633)
Q Consensus 533 s~l~~LVIDEAD~Lld~gf~~~l~~Il~~l-pk~~Q~IlfS 572 (633)
...-++||||.+.-++......+..++..+ ..+.|+|+.|
T Consensus 353 ~~~pililDE~d~~Ld~~~~~~~~~~l~~~~~~~~Q~I~iT 393 (427)
T d1w1wa_ 353 QPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVIS 393 (427)
T ss_dssp SCCSEEEESSTTTTCCHHHHHHHHHHHHHHCBTTBEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 344589999999988876677777776543 4567887743
No 198
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}
Probab=23.53 E-value=85 Score=28.25 Aligned_cols=85 Identities=26% Similarity=0.182 Sum_probs=47.0
Q ss_pred HhCCCcEEEEccCC-CCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEccc-HHHHHHHHHHHHHHHhcCCCceEEEE
Q 006737 413 CLEGKDAVVKAKTG-TGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPT-RELASQIAAEAIALLKNHDGIGVLTL 490 (633)
Q Consensus 413 il~grDvLv~ApTG-SGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPT-ReLa~Qi~~~l~~l~~~~~~i~v~~l 490 (633)
+|.||-+||.+.++ -|+..| ..+.+.. .+++++.-+ .+.+.++...+.... +.++..+
T Consensus 1 ~L~gK~alITGas~GIG~aiA------~~la~~G----------a~V~~~~r~~~~~~~~~~~~~~~~~----g~~~~~~ 60 (260)
T d1x1ta1 1 MLKGKVAVVTGSTSGIGLGIA------TALAAQG----------ADIVLNGFGDAAEIEKVRAGLAAQH----GVKVLYD 60 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHH------HHHHHTT----------CEEEEECCSCHHHHHHHHHHHHHHH----TSCEEEE
T ss_pred CCCcCEEEEeCCCCHHHHHHH------HHHHHCC----------CEEEEEeCCcHHHHHHHHHHHHHhc----CCcEEEE
Confidence 46788888754443 344432 2333332 346555543 456666666665543 4556666
Q ss_pred ECCccchHHHHHHh------cCCCcEEEECchh
Q 006737 491 VGGTRFKVDQRRLE------SDPCQILVATPGR 517 (633)
Q Consensus 491 ~Gg~~~~~~~~~l~------~~~~dILIaTPgr 517 (633)
..+.....+...+. .+..||||...+.
T Consensus 61 ~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~ 93 (260)
T d1x1ta1 61 GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI 93 (260)
T ss_dssp CCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCCcEEEeeccc
Confidence 66665544443322 2568999987664
No 199
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=23.46 E-value=11 Score=37.89 Aligned_cols=43 Identities=30% Similarity=0.325 Sum_probs=28.4
Q ss_pred eEEEEecccccCCc------ChHHHHHHHHHH---CCC---------------CCcEEEEeccCChh
Q 006737 536 KMLVLDEADHLLDL------GFRKDVENIVDC---LPR---------------RRQSLLFSATMPKE 578 (633)
Q Consensus 536 ~~LVIDEAD~Lld~------gf~~~l~~Il~~---lpk---------------~~Q~IlfSATl~~e 578 (633)
.+|||||.|.+... ++......+++. ||. -.|+|++|||-.+.
T Consensus 332 ~l~~iDE~~~~~~q~~~~~~~~~~r~~~l~e~G~~LP~a~dn~pL~~ee~~~~~~~~i~vsatP~~~ 398 (413)
T d1t5la1 332 FLIIVDESHVTLPQLRGMYNGDRARKQVLVDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPY 398 (413)
T ss_dssp CEEEEETHHHHHHHHHHHHHHHHHHHHHHHHHTSSCGGGGGSSCCCHHHHHHHCSEEEEEESSCCHH
T ss_pred eEEEEechhhhHHHHHHHHHHHHHHHHHHHhccccCcccccCCCcCHHHHHHhcCCEEEEeCCCCch
Confidence 36899999998742 244445555542 221 25899999998864
No 200
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=22.64 E-value=28 Score=31.88 Aligned_cols=29 Identities=31% Similarity=0.382 Sum_probs=23.5
Q ss_pred cHHHHHHHHHHhCCCcEEEEccCCCCchh
Q 006737 403 TRVQEATLSACLEGKDAVVKAKTGTGKSI 431 (633)
Q Consensus 403 t~iQ~~aIp~il~grDvLv~ApTGSGKTl 431 (633)
+......+..++.|+-.++.|++|.|||.
T Consensus 82 ~~~g~~~L~~~l~~kt~~~~G~SGVGKST 110 (225)
T d1u0la2 82 TGMGIEELKEYLKGKISTMAGLSGVGKSS 110 (225)
T ss_dssp TCTTHHHHHHHHSSSEEEEECSTTSSHHH
T ss_pred cchhHhhHHHHhcCCeEEEECCCCCCHHH
Confidence 33445667777889999999999999997
No 201
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=22.63 E-value=18 Score=31.44 Aligned_cols=16 Identities=19% Similarity=0.353 Sum_probs=12.4
Q ss_pred EEEEccCCCCchhhhH
Q 006737 419 AVVKAKTGTGKSIAFL 434 (633)
Q Consensus 419 vLv~ApTGSGKTlayl 434 (633)
++|.||.||||++..-
T Consensus 6 I~I~GppGSGKgT~ak 21 (225)
T d1ckea_ 6 ITIDGPSGAGKGTLCK 21 (225)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 4566999999998543
No 202
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=22.51 E-value=72 Score=28.84 Aligned_cols=84 Identities=20% Similarity=0.211 Sum_probs=47.5
Q ss_pred hCCCcEEEEccCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEECC
Q 006737 414 LEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493 (633)
Q Consensus 414 l~grDvLv~ApTGSGKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~Gg 493 (633)
|.||-+||.+. ++-+-+.+ ...+... +..++++.-..+-+.++.++++.. +.++..+..+
T Consensus 9 L~gK~alITGa---s~GIG~ai--a~~la~~----------Ga~V~~~~r~~~~~~~~~~~l~~~-----g~~~~~~~~D 68 (255)
T d1fmca_ 9 LDGKCAIITGA---GAGIGKEI--AITFATA----------GASVVVSDINADAANHVVDEIQQL-----GGQAFACRCD 68 (255)
T ss_dssp CTTCEEEETTT---TSHHHHHH--HHHHHTT----------TCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECC
T ss_pred CCCCEEEEeCC---CcHHHHHH--HHHHHHC----------CCEEEEEECCHHHHHHHHHHHHHc-----CCcEEEEEcc
Confidence 46888887544 33333322 2233333 235766666667777777777654 3345556666
Q ss_pred ccchHHHHHHh------cCCCcEEEECchh
Q 006737 494 TRFKVDQRRLE------SDPCQILVATPGR 517 (633)
Q Consensus 494 ~~~~~~~~~l~------~~~~dILIaTPgr 517 (633)
.....+...+. -+..||+|...+.
T Consensus 69 vs~~~~~~~~~~~~~~~~g~iDilvnnAG~ 98 (255)
T d1fmca_ 69 ITSEQELSALADFAISKLGKVDILVNNAGG 98 (255)
T ss_dssp TTCHHHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEeeeCCcC
Confidence 55444333221 2568999998774
No 203
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=22.44 E-value=30 Score=33.09 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=15.9
Q ss_pred EEEEccCCCCchhhhHHHHHHHHHH
Q 006737 419 AVVKAKTGTGKSIAFLLPAIEAVLK 443 (633)
Q Consensus 419 vLv~ApTGSGKTlaylLPiL~~l~~ 443 (633)
+-|+|+.|||||+.. -.|..++.
T Consensus 83 IGIaG~sgSGKSTla--~~L~~lL~ 105 (308)
T d1sq5a_ 83 ISIAGSVAVGKSTTA--RVLQALLS 105 (308)
T ss_dssp EEEEECTTSSHHHHH--HHHHHHHT
T ss_pred EEEeCCCCCCCcHHH--HHHHHHHh
Confidence 557899999999843 34455554
No 204
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=22.19 E-value=48 Score=26.49 Aligned_cols=13 Identities=15% Similarity=0.286 Sum_probs=12.1
Q ss_pred EEEEccCCCCchh
Q 006737 419 AVVKAKTGTGKSI 431 (633)
Q Consensus 419 vLv~ApTGSGKTl 431 (633)
++++|+.|+|||.
T Consensus 3 ivlvG~~~vGKSs 15 (160)
T d1r8sa_ 3 ILMVGLDAAGKTT 15 (160)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7899999999997
No 205
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=21.99 E-value=27 Score=32.00 Aligned_cols=45 Identities=22% Similarity=0.180 Sum_probs=32.4
Q ss_pred CCeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccCChhh
Q 006737 533 MGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL 579 (633)
Q Consensus 533 s~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl~~el 579 (633)
..-.+++|||.+.-+.......+..++..+.++.|+|+. |=++.+
T Consensus 240 ~~~~~~~iDEpe~~Lhp~~~~~l~~~l~~~~~~~Qviit--THsp~~ 284 (308)
T d1e69a_ 240 KPSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVI--THNKIV 284 (308)
T ss_dssp SCCSEEEEESCCSSCCHHHHHHHHHHHHHHTTTSEEEEE--CCCTTG
T ss_pred ccCchhhhhhccccCCHHHHHHHHHHHHHhccCCEEEEE--ECCHHH
Confidence 345689999999877666666777777766678998874 455554
No 206
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=21.62 E-value=13 Score=34.34 Aligned_cols=48 Identities=21% Similarity=0.326 Sum_probs=34.4
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCCC-CcEEEEeccCChhh
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-RQSLLFSATMPKEL 579 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~-~Q~IlfSATl~~el 579 (633)
+.+-++|++||-=.-+|......+..++..+.+. --+|++...-..++
T Consensus 143 ~~~P~iLllDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vtHd~~~~ 191 (229)
T d3d31a2 143 VTNPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQTEA 191 (229)
T ss_dssp TSCCSEEEEESSSTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred hccCCceeecCCCcCCCHHHHHHHHHHHHHHHhcCCcEEEEEcCCHHHH
Confidence 5678899999999989888788888888776543 34566555544443
No 207
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=21.46 E-value=18 Score=31.93 Aligned_cols=19 Identities=26% Similarity=0.406 Sum_probs=16.1
Q ss_pred CCCcEEEEccCCCCchhhh
Q 006737 415 EGKDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTlay 433 (633)
.|+-++++++.|+|||.+.
T Consensus 14 ~g~gvli~G~sG~GKS~la 32 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECA 32 (177)
T ss_dssp TTEEEEEEESSSSSHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHH
Confidence 5678999999999998643
No 208
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=21.24 E-value=21 Score=33.09 Aligned_cols=47 Identities=17% Similarity=0.217 Sum_probs=33.1
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCC--CCcEEEEeccCChh
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR--RRQSLLFSATMPKE 578 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk--~~Q~IlfSATl~~e 578 (633)
..+-++|++||-=.-+|......+..++..+.+ ..-+|+.|=-+...
T Consensus 142 ~~~P~illlDEPts~LD~~~~~~i~~~i~~l~~~~g~tvi~vtHd~~~~ 190 (240)
T d2onka1 142 VIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEA 190 (240)
T ss_dssp TTCCSSBEEESTTSSCCHHHHHHHHHHHHHHHHHHTCCEEEEESCHHHH
T ss_pred hccCCceEecCccccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence 456788999999988888888888888776643 34455555444433
No 209
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=20.61 E-value=11 Score=35.11 Aligned_cols=44 Identities=25% Similarity=0.301 Sum_probs=32.2
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCCC-CcEEEEeccC
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-RQSLLFSATM 575 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~-~Q~IlfSATl 575 (633)
..+-++|++||--.-+|......+..++..+.+. --++++...-
T Consensus 156 ~~~P~llllDEPt~~LD~~~~~~i~~~i~~l~~~~g~tvi~vTHd 200 (242)
T d1oxxk2 156 VKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHD 200 (242)
T ss_dssp TTCCSEEEEESTTTTSCGGGHHHHHHHHHHHHHHHCCEEEEEESC
T ss_pred hhcccceeecCCccCCCHHHHHHHHHHHHHHHhccCCEEEEEECC
Confidence 4567899999999999998888888888777542 3344444433
No 210
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=20.59 E-value=17 Score=33.54 Aligned_cols=44 Identities=16% Similarity=0.226 Sum_probs=33.1
Q ss_pred cCCeeEEEEecccccCCcChHHHHHHHHHHCCCCCcEEEEeccC
Q 006737 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575 (633)
Q Consensus 532 Ls~l~~LVIDEAD~Lld~gf~~~l~~Il~~lpk~~Q~IlfSATl 575 (633)
..+-++||+||-=.=+|......+..++..+...-.+|+++..-
T Consensus 155 ~~~P~lLllDEPt~gLD~~~~~~i~~~i~~l~~~g~til~~tH~ 198 (240)
T d1ji0a_ 155 MSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQN 198 (240)
T ss_dssp TTCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred HhCCCEeeecCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 55678999999999898888888888888776554455555433
No 211
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=20.58 E-value=16 Score=31.37 Aligned_cols=13 Identities=23% Similarity=0.659 Sum_probs=11.8
Q ss_pred EEEEccCCCCchh
Q 006737 419 AVVKAKTGTGKSI 431 (633)
Q Consensus 419 vLv~ApTGSGKTl 431 (633)
+++.|+.|||||.
T Consensus 12 I~ieG~~GsGKTT 24 (197)
T d2vp4a1 12 VLIEGNIGSGKTT 24 (197)
T ss_dssp EEEECSTTSCHHH
T ss_pred EEEECCCCCCHHH
Confidence 6788999999998
No 212
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.47 E-value=19 Score=33.19 Aligned_cols=14 Identities=29% Similarity=0.453 Sum_probs=12.4
Q ss_pred EEEEccCCCCchhh
Q 006737 419 AVVKAKTGTGKSIA 432 (633)
Q Consensus 419 vLv~ApTGSGKTla 432 (633)
.+++|++|||||.+
T Consensus 27 nvlvG~NgsGKS~i 40 (308)
T d1e69a_ 27 TAIVGPNGSGKSNI 40 (308)
T ss_dssp EEEECCTTTCSTHH
T ss_pred EEEECCCCCcHHHH
Confidence 48899999999984
No 213
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}
Probab=20.32 E-value=1.2e+02 Score=27.12 Aligned_cols=83 Identities=18% Similarity=0.136 Sum_probs=46.6
Q ss_pred hCCCcEEEEccCCC-CchhhhHHHHHHHHHHhcCCCCCCCCCCeEEEEEcccHHHHHHHHHHHHHHHhcCCCceEEEEEC
Q 006737 414 LEGKDAVVKAKTGT-GKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492 (633)
Q Consensus 414 l~grDvLv~ApTGS-GKTlaylLPiL~~l~~~~~~~~~~~~~~~~vLILvPTReLa~Qi~~~l~~l~~~~~~i~v~~l~G 492 (633)
|.||.+||.+.++. |+-.+- .+.+. +.+++++.-+.+-+..+.+.+... +..+..+..
T Consensus 4 L~gK~alITGas~GIG~aia~------~la~~----------G~~V~i~~r~~~~l~~~~~~~~~~-----~~~~~~~~~ 62 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVE------ELAGL----------GARVYTCSRNEKELDECLEIWREK-----GLNVEGSVC 62 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHH------HHHHT----------TCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEEC
T ss_pred CCCCEEEEeCCCCHHHHHHHH------HHHHC----------CCEEEEEECCHHHHHHHHHHHHhc-----CCCceEEEe
Confidence 57888999876643 655432 23333 235777777766666655555443 344445555
Q ss_pred CccchHHHHHH-------hcCCCcEEEECchh
Q 006737 493 GTRFKVDQRRL-------ESDPCQILVATPGR 517 (633)
Q Consensus 493 g~~~~~~~~~l-------~~~~~dILIaTPgr 517 (633)
+.....+.+.+ ..+..+|+|...+.
T Consensus 63 D~s~~~~~~~~~~~~~~~~~g~idilinnag~ 94 (258)
T d1ae1a_ 63 DLLSRTERDKLMQTVAHVFDGKLNILVNNAGV 94 (258)
T ss_dssp CTTCHHHHHHHHHHHHHHTTSCCCEEEECCCC
T ss_pred ecCCHHHHHHHHHHHHHHhCCCcEEEeccccc
Confidence 55544433221 12457898887654
No 214
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=20.09 E-value=20 Score=31.65 Aligned_cols=19 Identities=26% Similarity=0.417 Sum_probs=16.1
Q ss_pred CCCcEEEEccCCCCchhhh
Q 006737 415 EGKDAVVKAKTGTGKSIAF 433 (633)
Q Consensus 415 ~grDvLv~ApTGSGKTlay 433 (633)
.|+-++++++.|+|||.+.
T Consensus 13 ~g~gvl~~G~sG~GKStla 31 (176)
T d1kkma_ 13 YGLGVLITGDSGVGKSETA 31 (176)
T ss_dssp TTEEEEEECCTTSCHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHH
Confidence 5678999999999998743
Done!