Query 006738
Match_columns 633
No_of_seqs 46 out of 48
Neff 3.0
Searched_HMMs 29240
Date Mon Mar 25 07:38:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006738.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006738hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2q12_A DIP13 alpha, DCC-intera 99.9 7E-21 2.4E-25 184.0 20.2 206 27-238 22-235 (265)
2 2q13_A DCC-interacting protein 99.8 2.1E-19 7.1E-24 181.8 20.0 205 27-237 22-234 (385)
3 4h8s_A DCC-interacting protein 99.8 4E-17 1.4E-21 166.2 20.3 201 28-234 46-254 (407)
4 2z0v_A SH3-containing GRB2-lik 99.5 1.3E-12 4.5E-17 126.2 21.1 189 32-232 15-227 (240)
5 1zww_A SH3-containing GRB2-lik 99.5 5.6E-12 1.9E-16 122.7 22.0 183 32-232 31-243 (256)
6 1uru_A Amphiphysin; endocytosi 99.0 3.3E-08 1.1E-12 93.2 21.7 199 33-237 38-241 (244)
7 2fic_A Bridging integrator 1; 99.0 1.7E-08 5.7E-13 96.6 19.1 192 36-233 56-250 (251)
8 4avm_A Bridging integrator 2; 98.4 4.8E-05 1.6E-09 74.0 20.8 139 95-235 91-233 (237)
9 4a3a_A Amphiphysin; structural 97.9 0.0019 6.4E-08 63.3 21.1 133 104-239 105-241 (243)
10 1i4d_A Arfaptin 2, partner of 97.7 0.0034 1.2E-07 62.0 19.7 180 33-225 8-202 (224)
11 2ykt_A Brain-specific angiogen 97.7 0.0021 7E-08 64.0 18.4 172 56-234 46-234 (253)
12 3dyt_A Sorting nexin-9; 3-heli 97.6 0.0024 8.4E-08 65.4 18.5 191 28-228 163-362 (366)
13 2d1l_A Metastasis suppressor p 97.6 0.0041 1.4E-07 62.3 18.5 106 38-146 19-137 (253)
14 4akv_A Sorting nexin-33; trans 97.2 0.024 8.4E-07 58.7 20.4 187 28-228 183-382 (386)
15 3ok8_A Brain-specific angiogen 96.8 0.099 3.4E-06 51.8 19.4 122 36-164 27-153 (222)
16 3abh_A Pacsin2, protein kinase 96.1 0.2 6.8E-06 49.1 16.3 80 41-127 45-125 (312)
17 2efk_A CDC42-interacting prote 96.0 1.1 3.8E-05 43.1 20.7 82 41-129 23-108 (301)
18 2efl_A Formin-binding protein 95.8 0.32 1.1E-05 46.7 16.3 82 41-129 30-115 (305)
19 3i2w_A Syndapin, LD46328P; EFC 95.6 0.81 2.8E-05 44.3 18.2 81 41-128 24-105 (290)
20 3plt_A Sphingolipid long chain 95.5 0.68 2.3E-05 46.3 17.6 139 33-188 20-158 (234)
21 4dyl_A Tyrosine-protein kinase 95.3 0.2 7E-06 51.8 13.5 92 31-129 17-111 (406)
22 2v0o_A FCHO2, FCH domain only 95.1 0.81 2.8E-05 43.5 16.2 77 41-128 34-110 (276)
23 2x3v_A Syndapin I, protein kin 95.0 1.4 4.8E-05 43.5 18.0 79 41-128 36-117 (337)
24 3haj_A Human pacsin2 F-BAR; pa 94.8 3 0.0001 44.1 20.9 84 38-128 35-119 (486)
25 3aco_A Pacsin2, protein kinase 94.6 1.8 6.2E-05 43.3 17.8 80 41-127 45-125 (350)
26 3m3w_A Pacsin3, protein kinase 91.5 12 0.00042 37.3 21.3 79 41-126 36-115 (320)
27 3g9g_A Suppressor of yeast pro 86.2 31 0.0011 35.0 18.8 185 27-227 41-256 (287)
28 2x3v_A Syndapin I, protein kin 84.0 35 0.0012 33.6 16.8 20 129-148 148-167 (337)
29 3aco_A Pacsin2, protein kinase 82.4 21 0.00073 35.6 13.8 23 128-150 156-178 (350)
30 4hpq_C ATG17, KLTH0D15642P; au 78.1 7.8 0.00027 41.3 9.4 48 117-167 310-359 (413)
31 4h8s_A DCC-interacting protein 77.1 67 0.0023 32.7 17.5 44 36-79 48-91 (407)
32 2q13_A DCC-interacting protein 75.8 71 0.0024 32.3 20.5 73 33-105 22-96 (385)
33 2v0o_A FCHO2, FCH domain only 70.2 73 0.0025 30.0 18.1 75 63-147 76-154 (276)
34 2efl_A Formin-binding protein 70.0 77 0.0026 30.2 16.0 22 129-150 137-158 (305)
35 2fic_A Bridging integrator 1; 67.6 85 0.0029 29.7 17.6 153 41-205 68-225 (251)
36 2efk_A CDC42-interacting prote 63.5 1.1E+02 0.0036 29.3 19.1 57 94-155 99-155 (301)
37 1m1j_B Fibrinogen beta chain; 61.6 32 0.0011 37.4 9.7 35 38-76 99-133 (464)
38 2l7b_A Apolipoprotein E, APO-E 57.8 1.3E+02 0.0045 30.7 13.1 162 27-194 30-213 (307)
39 3caz_A BAR protein; thermo-aci 57.4 92 0.0032 31.1 11.3 106 89-214 87-201 (294)
40 3rkv_A Putative peptidylprolyl 55.5 62 0.0021 26.8 8.7 78 63-149 77-160 (162)
41 3ghg_A Fibrinogen alpha chain; 52.5 65 0.0022 35.9 10.2 40 29-72 49-93 (562)
42 3zrx_A AF1503 protein, osmolar 52.4 55 0.0019 25.2 7.4 65 62-126 11-80 (115)
43 1u4q_A Spectrin alpha chain, b 52.1 1.6E+02 0.0055 27.9 15.6 38 41-78 84-127 (322)
44 2j1d_G DAAM1, disheveled-assoc 52.1 58 0.002 34.7 9.7 20 130-149 380-399 (483)
45 1uru_A Amphiphysin; endocytosi 50.1 1.6E+02 0.0055 27.3 18.7 160 41-212 53-222 (244)
46 3haj_A Human pacsin2 F-BAR; pa 50.1 2.5E+02 0.0086 29.5 17.6 26 44-69 79-104 (486)
47 3oja_B Anopheles plasmodium-re 49.4 2.3E+02 0.0078 29.7 13.6 37 173-209 558-594 (597)
48 3m3w_A Pacsin3, protein kinase 47.3 1E+02 0.0035 30.7 10.1 22 128-149 147-168 (320)
49 1quu_A Human skeletal muscle a 46.3 1.9E+02 0.0065 27.0 15.1 142 62-210 16-173 (250)
50 4dyl_A Tyrosine-protein kinase 45.5 89 0.003 32.3 9.7 82 61-150 73-155 (406)
51 2bnx_A Diaphanous protein homo 44.0 42 0.0014 34.7 7.0 72 41-130 248-331 (386)
52 4ido_A Atlastin-1; GTPase, GTP 42.7 1.1E+02 0.0039 32.9 10.2 109 62-188 290-403 (457)
53 2ifu_A Gamma-SNAP; membrane fu 41.9 2.2E+02 0.0075 26.6 11.1 110 125-240 158-278 (307)
54 1p5q_A FKBP52, FK506-binding p 40.4 2.2E+02 0.0076 27.4 11.1 64 85-151 226-294 (336)
55 2p22_C Protein SRN2; endosome, 40.3 2.3E+02 0.0077 27.3 10.9 24 130-154 159-182 (192)
56 2a01_A Apolipoprotein A-I; fou 39.7 1.5E+02 0.0051 28.8 9.7 123 27-159 4-129 (243)
57 3zcc_A HAMP, osmolarity sensor 39.4 1.2E+02 0.0041 23.4 7.5 65 62-126 11-80 (114)
58 2b1e_A Exocyst complex compone 36.0 4.5E+02 0.015 28.5 16.2 165 48-213 25-229 (564)
59 3f31_A Spectrin alpha chain, b 35.6 1.1E+02 0.0038 26.9 7.5 50 30-79 9-65 (149)
60 3abh_A Pacsin2, protein kinase 34.6 3.3E+02 0.011 26.4 13.3 22 128-149 156-177 (312)
61 2p7n_A Pathogenicity island 1 34.6 80 0.0027 34.0 7.3 87 31-123 178-270 (407)
62 4a1s_A PINS, partner of inscut 33.9 2.7E+02 0.0091 26.1 10.2 24 127-150 228-251 (411)
63 1cun_A Protein (alpha spectrin 33.4 2.6E+02 0.0088 24.9 12.2 18 88-105 35-52 (213)
64 3nzz_A Cell invasion protein S 32.1 16 0.00056 37.9 1.7 86 32-123 97-184 (308)
65 2d1l_A Metastasis suppressor p 30.6 4.2E+02 0.014 26.5 12.7 10 68-77 74-83 (253)
66 1g8x_A Myosin II heavy chain f 30.3 2.3E+02 0.0079 33.3 10.9 68 137-210 855-930 (1010)
67 3u8p_A Cytochrome B562 integra 30.3 2E+02 0.0067 30.5 9.2 105 27-149 36-148 (347)
68 4gcn_A Protein STI-1; structur 30.1 2.2E+02 0.0075 23.1 8.0 16 86-101 80-95 (127)
69 3edu_A Beta-I spectrin, spectr 30.1 3.2E+02 0.011 24.9 15.6 86 61-150 2-98 (218)
70 1hci_A Alpha-actinin 2; triple 30.1 4.4E+02 0.015 26.6 19.4 195 37-238 104-321 (476)
71 2pih_A Protein YMCA; regulate 29.5 2.3E+02 0.0079 25.8 8.7 21 106-126 98-118 (151)
72 3f0c_A TETR-molecule A, transc 29.1 2.7E+02 0.0093 23.8 8.7 25 197-221 181-205 (216)
73 2pjw_H Uncharacterized protein 28.6 1.9E+02 0.0064 25.0 7.4 52 84-150 33-84 (88)
74 3oja_B Anopheles plasmodium-re 28.1 1.2E+02 0.0043 31.7 7.5 16 131-146 479-494 (597)
75 1gs9_A Apolipoprotein E, APOE4 27.6 3.4E+02 0.012 25.2 9.7 88 24-113 19-115 (165)
76 2yf2_A C4B binding protein; im 26.9 71 0.0024 26.1 4.2 30 86-115 34-63 (65)
77 3r9v_A Invasin IPAD; type III 26.7 55 0.0019 33.7 4.4 82 33-123 97-180 (286)
78 4fp9_B Mterf domain-containing 26.6 17 0.00058 37.4 0.7 22 198-219 253-274 (335)
79 3sza_A Aldehyde dehydrogenase, 26.4 2.5E+02 0.0084 29.6 9.4 64 14-77 3-73 (469)
80 2j69_A Bacterial dynamin-like 26.4 2.4E+02 0.0083 31.2 9.7 58 88-150 632-690 (695)
81 2j0o_A Invasin IPAD; type III 26.3 60 0.002 33.9 4.6 84 31-123 117-202 (318)
82 2gno_A DNA polymerase III, gam 26.2 3.4E+02 0.012 26.8 9.9 66 85-150 163-234 (305)
83 3zqe_A Protein PRGI, cell inva 25.5 19 0.00066 37.3 0.9 88 30-123 92-181 (305)
84 3r6n_A Desmoplakin; spectrin r 25.5 6.4E+02 0.022 26.9 18.6 170 41-235 71-264 (450)
85 3i9y_A Sensor protein; stacked 24.9 3.6E+02 0.012 27.3 9.9 102 96-213 160-261 (276)
86 3hym_B Cell division cycle pro 24.9 1.3E+02 0.0043 26.8 6.0 22 128-149 165-186 (330)
87 4a1s_A PINS, partner of inscut 24.7 4.3E+02 0.015 24.6 13.7 24 127-150 268-291 (411)
88 1ayz_A UBC2, ubiquitin-conjuga 24.4 50 0.0017 30.6 3.4 30 202-237 124-153 (169)
89 3nft_A Translocator protein BI 24.1 66 0.0023 33.4 4.4 82 25-121 117-198 (303)
90 2odv_A Plectin 1, HD1; plakin 23.9 4.4E+02 0.015 25.7 10.1 128 39-191 7-146 (235)
91 4b4t_Q 26S proteasome regulato 23.9 3.3E+02 0.011 25.8 9.0 27 27-53 4-32 (434)
92 1kt0_A FKBP51, 51 kDa FK506-bi 23.8 3.8E+02 0.013 27.1 10.0 64 85-151 347-415 (457)
93 1f5n_A Interferon-induced guan 23.7 6.5E+02 0.022 27.8 12.4 134 98-234 436-581 (592)
94 3vtx_A MAMA; tetratricopeptide 23.5 2.1E+02 0.0071 23.7 6.7 21 129-149 80-100 (184)
95 2ym9_A Cell invasion protein S 22.1 31 0.0011 36.4 1.6 86 31-122 134-221 (346)
96 1jfi_B DR1 protein, transcript 22.1 2.7E+02 0.0093 26.8 7.9 43 133-177 85-127 (179)
97 3q5d_A Atlastin-1; G protein, 21.7 6E+02 0.021 27.0 11.3 104 62-182 290-398 (447)
98 3axj_A GM27569P, translin; tra 21.0 6E+02 0.021 25.0 12.3 78 31-110 69-174 (249)
99 2pjw_V Vacuolar protein sortin 21.0 4.1E+02 0.014 23.0 10.7 79 57-152 6-84 (91)
100 2byk_A Chrac-16; nucleosome sl 21.0 32 0.0011 31.7 1.3 22 169-190 44-65 (140)
101 4abn_A Tetratricopeptide repea 20.9 1.7E+02 0.0057 29.7 6.6 189 27-225 69-284 (474)
102 3s84_A Apolipoprotein A-IV; fo 20.9 6.3E+02 0.021 25.1 18.2 36 199-234 205-241 (273)
103 1deq_A Fibrinogen (alpha chain 20.9 7.4E+02 0.025 26.6 11.6 87 36-136 60-152 (390)
104 2bk9_A CG9734-PA; oxygen trans 20.1 2.3E+02 0.0077 24.8 6.6 20 60-79 80-99 (153)
No 1
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=99.87 E-value=7e-21 Score=183.99 Aligned_cols=206 Identities=15% Similarity=0.177 Sum_probs=177.1
Q ss_pred chhhHHHHHHHhHh-HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHH
Q 006738 27 PLAQLDELAQASQD-MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKL 105 (633)
Q Consensus 27 p~a~ldEl~~a~qd-m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL 105 (633)
-+..+|+-++..+. |.++-+.++.|+.++.++......|+++|.+++...+. ...+|+.++.+|..||++.+||...
T Consensus 22 ~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~--~~~~d~~~~~~L~~f~~~l~ei~~~ 99 (265)
T 2q12_A 22 LLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFP--LGGDDEVMSSTLQQFSKVIDELSSC 99 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCCC-------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888888 99999999999999999999999999999999874321 1346788999999999999999999
Q ss_pred HHHHHHHhhhhccCCcHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccc---cHHHHHHHHHhhHhh
Q 006738 106 VDAYRSHIFQTITIPSESLLN-ELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETF---SLQQLQEAHDEYDQE 181 (633)
Q Consensus 106 ~d~yr~nI~~tIt~PsESLLk-eLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~---i~eqle~~r~~fqEe 181 (633)
...+..++.++|..|++.+++ ||+.++|.||.||+.|++|+..++++..-.|+| +.|.. ...+|..+|+.|+
T Consensus 100 ~~~l~~~~~~~~~~PL~~f~~~dlk~~ke~kk~fdk~~~~yd~al~k~~~~~k~k--~~e~~l~Ea~~~l~~~Rk~f~-- 175 (265)
T 2q12_A 100 HAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKR--ENDKVKYEVTEDVYTSRKKQH-- 175 (265)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC--cchhhHHHHHHHHHHHHHHHH--
Confidence 999999999999999999999 999999999999999999998887544333333 22222 3489999999999
Q ss_pred HhHHHHHHh--hhccCCchhHHHHHHHHHHHHHHHHHHHhhhhh-ccchHHHHHHhhhhc
Q 006738 182 ATLFVFRLK--SLKQGQSRSLLTQAARHHAAQLSFVKKALKSLE-AVDPHVKMVAEQQHI 238 (633)
Q Consensus 182 aqmc~frLK--sLKqgq~rsLLtqaaRhhaAQl~fF~~GLKsLE-~lephVk~lae~~hi 238 (633)
.++|.|-++ .|+.++..++|..+..|.+||.+||+.|...+. .++|+++.|..+++.
T Consensus 176 ~~~ldyv~~l~~l~~kk~~e~le~l~~~~~a~~~ff~~g~e~~~~~~~p~~~~l~~~l~~ 235 (265)
T 2q12_A 176 QTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQN 235 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999877 899999999999999999999999999999984 999999999887653
No 2
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.83 E-value=2.1e-19 Score=181.78 Aligned_cols=205 Identities=16% Similarity=0.187 Sum_probs=174.0
Q ss_pred chhhHHHHHHHhHh-HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHH
Q 006738 27 PLAQLDELAQASQD-MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKL 105 (633)
Q Consensus 27 p~a~ldEl~~a~qd-m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL 105 (633)
-+..+|+-++..+. |.++.+.++.++.++-++......|+++|.+++..... ...+|+.++.+|..||++.+||..+
T Consensus 22 ~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~--~~~~d~~v~~~l~~f~~~~~ei~~~ 99 (385)
T 2q13_A 22 LLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFP--LGGDDEVMSSTLQQFSKVIDELSSC 99 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCC--C---CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--CCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888888 99999999999999999989999999999998763210 1236888999999999999999999
Q ss_pred HHHHHHHhhhhccCCcHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccc---cHHHHHHHHHhhHhh
Q 006738 106 VDAYRSHIFQTITIPSESLLN-ELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETF---SLQQLQEAHDEYDQE 181 (633)
Q Consensus 106 ~d~yr~nI~~tIt~PsESLLk-eLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~---i~eqle~~r~~fqEe 181 (633)
...+..++.++|..|++++++ ||+.++|.||.||+.|++|+..++++.--.|+| +.+.. ..+||..+|+.|+
T Consensus 100 ~~~l~~~~~~~~~~PL~~f~~~di~~~ke~kk~fek~~~~yd~al~k~~~~~k~k--~~e~~~~ea~~~l~~~rk~f~-- 175 (385)
T 2q13_A 100 HAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKR--ENDKVKYEVTEDVYTSRKKQH-- 175 (385)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSS--CCHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC--chhhHHHHHHHHHHHHHHHHH--
Confidence 999999999999999999999 999999999999999999999888654433332 22221 2378999999999
Q ss_pred HhHHHHHHh--hhccCCchhHHHHHHHHHHHHHHHHHHHhhhh-hccchHHHHHHhhhh
Q 006738 182 ATLFVFRLK--SLKQGQSRSLLTQAARHHAAQLSFVKKALKSL-EAVDPHVKMVAEQQH 237 (633)
Q Consensus 182 aqmc~frLK--sLKqgq~rsLLtqaaRhhaAQl~fF~~GLKsL-E~lephVk~lae~~h 237 (633)
.++|.|.++ .|..++...+|..+..|.+||++||++|...+ +.++|+++.|..+++
T Consensus 176 ~~~ldy~~~l~~l~~rk~~e~le~l~~~~~a~~~ff~~g~~~~~~~~~~~~~~l~~~l~ 234 (385)
T 2q13_A 176 QTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQ 234 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999987 99999999999999999999999999999997 699999988876644
No 3
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.75 E-value=4e-17 Score=166.23 Aligned_cols=201 Identities=16% Similarity=0.194 Sum_probs=153.0
Q ss_pred hhhHHHHHHHhHh-HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHH
Q 006738 28 LAQLDELAQASQD-MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLV 106 (633)
Q Consensus 28 ~a~ldEl~~a~qd-m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~ 106 (633)
+..+|+-++..++ |.++-+.++.++.++-+.......|+++|.++..-.. ....+|+++..+|..|+++..|+....
T Consensus 46 l~~~E~~~~~l~~~l~kl~k~~~~~~~~~~~~~~a~~~f~~~l~~~~~~~~--~~~~~d~~~~~~l~~f~~~~~ei~~~~ 123 (407)
T 4h8s_A 46 LSVFEEDAGTLTDYTNQLLQAMQRVYGAQNEMCLATQQLSKQLLAYEKQNF--ALGKGDEEVISTLHYFSKVVDELNLLH 123 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSCC--C----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc--cccCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555 6666666666666665555555566666655443211 123467889999999999999999999
Q ss_pred HHHHHHhhhhccCCcHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccc---cHHHHHHHHHhhHhhH
Q 006738 107 DAYRSHIFQTITIPSESLLN-ELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETF---SLQQLQEAHDEYDQEA 182 (633)
Q Consensus 107 d~yr~nI~~tIt~PsESLLk-eLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~---i~eqle~~r~~fqEea 182 (633)
+.+.+++.++|..|++++++ +|+.++|+||+||+.++.|+..+.++..-.|+| +.+.. ..++|.++|+.|+ .
T Consensus 124 ~~L~~~~~~~i~~pL~~f~k~di~~~ke~kK~Fek~~~~Yd~~l~Ky~~~~k~k--~~~~~~~e~~~~l~~~Rk~f~--~ 199 (407)
T 4h8s_A 124 TELAKQLADTMVLPIIQFREKDLTEVSTLKDLFGLASNEHDLSMAKYSRLPKKK--ENEKVKTEVGKEVAAARRKQH--L 199 (407)
T ss_dssp HHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSTT--CCHHHHHHHHHHHHHHHHHHH--H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC--CchHHHHHHHHHHHHHHHHHH--H
Confidence 99999999999999999999 999999999999999999999998543222221 12221 2367999999999 7
Q ss_pred hHHHHHHh--hhccCCchhHHHHHHHHHHHHHHHHHHHhhhh-hccchHHHHHHh
Q 006738 183 TLFVFRLK--SLKQGQSRSLLTQAARHHAAQLSFVKKALKSL-EAVDPHVKMVAE 234 (633)
Q Consensus 183 qmc~frLK--sLKqgq~rsLLtqaaRhhaAQl~fF~~GLKsL-E~lephVk~lae 234 (633)
+.|.|..+ .|+.++..++|..+..|++||.+||+.|...+ +.++|+++.+..
T Consensus 200 asldyv~~l~~lq~rk~~e~le~l~~~~~a~~~~f~~~~~~~~~~~~~~~~~l~~ 254 (407)
T 4h8s_A 200 SSLQYYCALNALQYRKQMAMMEPMIGFAHGQINFFKKGAEMFSKRMDSFLSSVAD 254 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777654 99999999999999999999999999999987 568999877654
No 4
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=99.51 E-value=1.3e-12 Score=126.24 Aligned_cols=189 Identities=16% Similarity=0.262 Sum_probs=151.4
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHhhh-----HHHHH-----------------HHHHHHhhhhhhh-cccCCchhh
Q 006738 32 DELAQASQDMQDMRGCYDSLLSAAAATANS-----AYEFS-----------------ESLQELGACLLEK-TALNDNEES 88 (633)
Q Consensus 32 dEl~~a~qdm~~Mk~~ydsllsaaaa~~ns-----~yefs-----------------EaleemGscll~k-ta~~dd~e~ 88 (633)
+|..+.-+.+..|++.+..|+...-++.+. +..|. ....-||.|+++- ..+.+|...
T Consensus 15 ~d~~~lE~r~d~~~~~~~~l~k~~~~yl~pn~~~r~~~~~~~~i~k~~~~~k~~~~~~~~~~L~~~m~~~~~~l~~ds~~ 94 (240)
T 2z0v_A 15 DEFLDMERKIDVTNKVVAEILSKTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTF 94 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHTCCCCCCSSCCCCCCSSCCHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHhccccCCCCCCcHHHHHHHHHHHHhhcCCCchH
Confidence 456666677888889999998888776441 11110 0012255555433 234468899
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCcccc
Q 006738 89 GKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLN-ELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFS 167 (633)
Q Consensus 89 g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLk-eLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i 167 (633)
|.+|.++|.++.+|-.....|...|..++.-|+..+|+ |++.+.+-+|.++++|-+|+++++ +. .| ..
T Consensus 95 g~aL~~~g~a~~~ia~~~~~~~~~v~~~~l~pL~~~l~~d~k~i~~~rKkle~~rLd~D~ak~-k~-------~k---~~ 163 (240)
T 2z0v_A 95 GNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKKK-RV-------GK---IP 163 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHT-TT-------TS---SC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-------cc---cc
Confidence 99999999999999999999999999999999999997 999999999999999999999864 22 22 25
Q ss_pred HHHHHHHHHhhHhhHhHHHHHHhhhccCCchhHHHHHHHHHHHHHHHHHHHhhhhhccchHHHHH
Q 006738 168 LQQLQEAHDEYDQEATLFVFRLKSLKQGQSRSLLTQAARHHAAQLSFVKKALKSLEAVDPHVKMV 232 (633)
Q Consensus 168 ~eqle~~r~~fqEeaqmc~frLKsLKqgq~rsLLtqaaRhhaAQl~fF~~GLKsLE~lephVk~l 232 (633)
++||+.+...|.+-...+.-++..|.... .+.|.++..+-.||+.||++|+..|+.|.|.+...
T Consensus 164 eeEl~~A~~~fe~~~e~~~~~m~~~~~~~-~e~l~~l~~~v~aQl~y~~~~~e~L~~l~~~l~~~ 227 (240)
T 2z0v_A 164 DEEVRQAVEKFEESKELAERSMFNFLEND-VEQVSQLAVFIEAALDYHRQSTEILQELQSKLQMR 227 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHST-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999977666666777887775 78888999999999999999999999999998643
No 5
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=99.47 E-value=5.6e-12 Score=122.72 Aligned_cols=183 Identities=16% Similarity=0.240 Sum_probs=148.2
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHhh----------------h-------------HHHHHHHHHHHhhhhhhhccc
Q 006738 32 DELAQASQDMQDMRGCYDSLLSAAAATAN----------------S-------------AYEFSESLQELGACLLEKTAL 82 (633)
Q Consensus 32 dEl~~a~qdm~~Mk~~ydsllsaaaa~~n----------------s-------------~yefsEaleemGscll~kta~ 82 (633)
+|..+.-+.+..|++.|+.|+...-++.+ . .+.|+++|.+.|..|
T Consensus 31 ~d~~~lE~r~d~~k~~~~kl~k~~~~yl~~np~~r~~~~~~~~i~k~~g~~k~~~~p~~~~~L~~~m~~~~~~l------ 104 (256)
T 1zww_A 31 DDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMSKIRGQEKGPGYPQAEALLAEAMLKFGREL------ 104 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTTC---------------------CCHHHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHhhC------
Confidence 45666667777778888777777664332 1 134555555555554
Q ss_pred CCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCC
Q 006738 83 NDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLN-ELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNG 161 (633)
Q Consensus 83 ~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLk-eLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~ 161 (633)
.+|...|.+|.++|.++.+|......+...|.+++.-|+..+|+ +++.+.+.+|..+.+|-+|+.+.+ +..|
T Consensus 105 ~~~s~~g~aL~~~g~a~~~la~~~~~~~~~i~~~~l~pl~~~l~~~~k~i~k~rkkl~~~rLdyD~~k~-k~~k------ 177 (256)
T 1zww_A 105 GDDCNFGPALGEVGEAMRELSEVKDSLDMEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFGYKKK-RQGK------ 177 (256)
T ss_dssp CSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH-TTTT------
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc------
Confidence 35678899999999999999999999999999999999999998 999999999999999999999875 2211
Q ss_pred CCccccHHHHHHHHHhhHhhHhHHHHHHhhhccCCchhHHHHHHHHHHHHHHHHHHHhhhhhccchHHHHH
Q 006738 162 KGETFSLQQLQEAHDEYDQEATLFVFRLKSLKQGQSRSLLTQAARHHAAQLSFVKKALKSLEAVDPHVKMV 232 (633)
Q Consensus 162 K~e~~i~eqle~~r~~fqEeaqmc~frLKsLKqgq~rsLLtqaaRhhaAQl~fF~~GLKsLE~lephVk~l 232 (633)
..++||+.+..+|++-...+.-.|..|-... .+.+.++..+..||++||++|+..|+.|.|.+...
T Consensus 178 ----~~eeEle~A~~~fe~~~e~~~~~m~~l~~~e-~e~~~~L~~~v~aQl~y~~~~~e~L~~l~~~l~~~ 243 (256)
T 1zww_A 178 ----IPDEELRQALEKFDESKEIAESSMFNLLEMD-IEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEER 243 (256)
T ss_dssp ----SCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2589999999999977777777777666554 67779999999999999999999999999998754
No 6
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=99.04 E-value=3.3e-08 Score=93.21 Aligned_cols=199 Identities=12% Similarity=0.070 Sum_probs=138.5
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHHHHH
Q 006738 33 ELAQASQDMQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYRSH 112 (633)
Q Consensus 33 El~~a~qdm~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~n 112 (633)
|..+..+.+..+.+++..|+...-++......+..+-..||.|+.+= ...+ ...+.+ ++.+...+..++..|..+
T Consensus 38 ~fe~~~~~f~~~e~~~~~l~k~~~~y~~~~~~~~~~~~~l~~~~~~l-~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~ 112 (244)
T 1uru_A 38 IFDDHLNNFNRQQASANRLQKEFNNYIRCVRAAQAASKTLMDSVCEI-YEPQ-WSGYDA---LQAQTGASESLWADFAHK 112 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCTT-STTHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCC-CCCchH---HHHHHHHHHHHHHHHHHH
Confidence 34445555777777777777777666666666666666666666431 1111 111123 233333467788888899
Q ss_pred hhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccC--CCCccc---cHHHHHHHHHhhHhhHhHHHH
Q 006738 113 IFQTITIPSESLLNELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKN--GKGETF---SLQQLQEAHDEYDQEATLFVF 187 (633)
Q Consensus 113 I~~tIt~PsESLLkeLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~--~K~e~~---i~eqle~~r~~fqEeaqmc~f 187 (633)
|...+..|+..|++.++++..+-+..+.||-||+.... +.+|-+.+. .|.+.- ..++++.++++|+.--..+.=
T Consensus 113 ~~~~vi~Pl~~~~~~~~~i~~~ikKR~~k~lDyD~~~~-~l~kl~~k~~k~kd~~kl~~ae~el~~ak~~ye~ln~~L~~ 191 (244)
T 1uru_A 113 LGDQVLIPLNTYTGQFPEMKKKVEKRNRKLIDYDGQRH-SFQNLQANANKRKDDVKLTKGREQLEEARRTYEILNTELHD 191 (244)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTTTCBTTBCCTTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHHhccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888889999999999875 555544332 133332 468999999999843333222
Q ss_pred HHhhhccCCchhHHHHHHHHHHHHHHHHHHHhhhhhccchHHHHHHhhhh
Q 006738 188 RLKSLKQGQSRSLLTQAARHHAAQLSFVKKALKSLEAVDPHVKMVAEQQH 237 (633)
Q Consensus 188 rLKsLKqgq~rsLLtqaaRhhaAQl~fF~~GLKsLE~lephVk~lae~~h 237 (633)
-|-.|-+.+...+...+..+..+|+.||+.+.+..+.|.+.++.+..+..
T Consensus 192 eLp~l~~~~~~~~~~~l~~fv~~q~~~~~~~~~~~~~l~~~~~~l~~~~~ 241 (244)
T 1uru_A 192 ELPALYDSRILFLVTNLQTLFATEQVFHNETAKIYSELEAIVDKLATESQ 241 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 23345555556677788889999999999999999999999999988754
No 7
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=99.02 E-value=1.7e-08 Score=96.60 Aligned_cols=192 Identities=13% Similarity=0.084 Sum_probs=129.7
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhh
Q 006738 36 QASQDMQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQ 115 (633)
Q Consensus 36 ~a~qdm~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~ 115 (633)
+..+-+..+.+++..|+...-++....-.+..+...||.|+.+= ...+...+..+..+|. -+..++..|...|..
T Consensus 56 ~~~~~f~~~e~~~~~l~k~~k~y~~~~~~~~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~---~~~~~~~d~~~~l~~ 130 (251)
T 2fic_A 56 QCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEV--YEPDWPGRDEANKIAE---NNDLLWMDYHQKLVD 130 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCTTSTTHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCcCCchhHHHHHH---HHHHHHHHHHHHHHH
Confidence 33444667777777777777766666666777777777776531 1111223344545543 244566777777888
Q ss_pred hccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccc---cHHHHHHHHHhhHhhHhHHHHHHhhh
Q 006738 116 TITIPSESLLNELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETF---SLQQLQEAHDEYDQEATLFVFRLKSL 192 (633)
Q Consensus 116 tIt~PsESLLkeLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~---i~eqle~~r~~fqEeaqmc~frLKsL 192 (633)
.+..|+..+++.++++..+-+..+.||-||+.... +.+|-+.+..|.+.- ..++++.++++|+.--..+.=.|-.|
T Consensus 131 ~vi~Pl~~~~~~~~~i~~~ikKR~~k~lDyD~~~~-~l~kl~~k~~kd~~kl~kae~el~~ak~~ye~ln~~L~~eLp~l 209 (251)
T 2fic_A 131 QALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARH-HYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSL 209 (251)
T ss_dssp HTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhhHHHHHH-HHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999998999999999997665 444444444444333 34889999999984433333333355
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhccchHHHHHH
Q 006738 193 KQGQSRSLLTQAARHHAAQLSFVKKALKSLEAVDPHVKMVA 233 (633)
Q Consensus 193 Kqgq~rsLLtqaaRhhaAQl~fF~~GLKsLE~lephVk~la 233 (633)
.+.+..-|...+.-++.+|++||+++.+.++.|.+.+..|+
T Consensus 210 ~~~~~~~~~~~l~~f~~~Q~~f~~~~~~~~~~L~~~l~~~~ 250 (251)
T 2fic_A 210 WNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVGLE 250 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 55555556678888999999999999999999998887665
No 8
>4avm_A Bridging integrator 2; protein binding, plasma membrane, BAR adaptor; 1.91A {Homo sapiens}
Probab=98.36 E-value=4.8e-05 Score=73.95 Aligned_cols=139 Identities=11% Similarity=0.079 Sum_probs=101.8
Q ss_pred HHhHHHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCcccc---HHHH
Q 006738 95 LGKVQFELQKLVDAYRSHIFQTITIPSESLLNELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFS---LQQL 171 (633)
Q Consensus 95 lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLkeLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i---~eql 171 (633)
+..+...+..|+..|...|...|..|+..+++-+.++..+-+..+.|.-||+.... +.+|-+.|..|.+.-+ .+++
T Consensus 91 ~~~~~~~~~~l~~~~~~~l~~~vi~Pl~~~~~~~~~i~k~I~KR~~kllDyd~~~~-~~~kl~~k~~kd~~kl~kae~el 169 (237)
T 4avm_A 91 LKAIVWNNDLLWEDYEEKLADQAVRTMEIYVAQFSEIKERIAKRGRKLVDYDSARH-HLEAVQNAKKKDEAKTAKAEEEF 169 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccCCcHHHHHHHHHHH
Confidence 44444556678889999998889999999999999999888889999999998876 6666655555666543 3778
Q ss_pred HHHHHhhHhhHhHHHHHHhhhccCCchhHHHH-HHHHHHHHHHHHHHHhhhhhccchHHHHHHhh
Q 006738 172 QEAHDEYDQEATLFVFRLKSLKQGQSRSLLTQ-AARHHAAQLSFVKKALKSLEAVDPHVKMVAEQ 235 (633)
Q Consensus 172 e~~r~~fqEeaqmc~frLKsLKqgq~rsLLtq-aaRhhaAQl~fF~~GLKsLE~lephVk~lae~ 235 (633)
+.++..|+.-=..+.=-|=.|-+.+ ..+|.. +.-+...|.+||..--|....|...+..|.++
T Consensus 170 ~~a~~~ye~lN~~L~~eLP~l~~~~-~~~~~~~~~~~i~~q~~f~~~~~~~~~~l~~~~~~~~~~ 233 (237)
T 4avm_A 170 NKAQTVFEDLNQELLEELPILYNSR-IGCYVTIFQNISNLRDVFYREMSKLNHNLYEVMSKLERQ 233 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 8888888743333322222222222 344444 44456779999999999999999999998774
No 9
>4a3a_A Amphiphysin; structural genomics, invagination, knobs-IN-holes, curvature membrane, structural genomics consortium; 1.78A {Homo sapiens} PDB: 4atm_A 3sog_A
Probab=97.87 E-value=0.0019 Score=63.32 Aligned_cols=133 Identities=13% Similarity=0.118 Sum_probs=92.3
Q ss_pred HHHHHHHHHhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCcccc---HHHHHHHHHhhHh
Q 006738 104 KLVDAYRSHIFQTITIPSESLLNELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFS---LQQLQEAHDEYDQ 180 (633)
Q Consensus 104 kL~d~yr~nI~~tIt~PsESLLkeLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i---~eqle~~r~~fqE 180 (633)
.++..|.+.+...+..|+..|++-+.++..+=+--+.|.-||+.... +.||=+.|..|.+.-+ .+||+.++++|+.
T Consensus 105 ~l~~d~~~~l~d~~l~Pl~~l~~~f~~i~k~I~KR~~KllDYD~~~~-k~~kL~~K~~kd~~kl~kae~el~~Ak~~Ye~ 183 (243)
T 4a3a_A 105 VLWEDFHQKLVDGSLLTLDTYLGQFPDIKNRIAKRSRKLVDYDSARH-HLEALQSSKRKDESRISKAEEEFQKAQKVFEE 183 (243)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHhcchHHHHHHHHH-HHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Confidence 46677777777777789999999999999777777888899998876 6665555555666533 3889999999984
Q ss_pred hHhHHHHHHhhhccCCchhHHHH-HHHHHHHHHHHHHHHhhhhhccchHHHHHHhhhhcc
Q 006738 181 EATLFVFRLKSLKQGQSRSLLTQ-AARHHAAQLSFVKKALKSLEAVDPHVKMVAEQQHID 239 (633)
Q Consensus 181 eaqmc~frLKsLKqgq~rsLLtq-aaRhhaAQl~fF~~GLKsLE~lephVk~lae~~hiD 239 (633)
-=..+.=-|=.|-+-+ +.+|.. +.-+..+|.+||....|....|...+..+++ ||.|
T Consensus 184 lN~~L~eELP~l~~~r-~~~~~~~~~s~i~~Q~~f~~e~~k~~~~l~~~~~~~~~-~~~~ 241 (243)
T 4a3a_A 184 FNVDLQEELPSLWSRR-VGFYVNTFKNVSSLEAKFHKEIAVLCHKLYEVMTKLGD-QHAD 241 (243)
T ss_dssp HHHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTC-
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh-hccC
Confidence 3222222221222221 334444 3445678999999999999999999988876 4443
No 10
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A*
Probab=97.69 E-value=0.0034 Score=62.02 Aligned_cols=180 Identities=19% Similarity=0.230 Sum_probs=122.4
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHH-------H
Q 006738 33 ELAQASQDMQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQK-------L 105 (633)
Q Consensus 33 El~~a~qdm~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~k-------L 105 (633)
||..-...+.++++.|..|+..+-+..+..|+.++.=.+||.+|= ..+.. +++.|..|..+|+.|+=+.+ -
T Consensus 8 EL~~klE~l~~~q~~Y~~L~~~~~~l~~~~~~l~qtq~~lG~~f~-~l~~~-~p~l~~~f~~~~~~~r~~~k~g~~Ll~~ 85 (224)
T 1i4d_A 8 ELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFA-DLSQK-SPELQEEFGYNAETQKLLCKNGETLLGA 85 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHT-CGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhh-CcHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 555555668899999999999999999999999999999999994 33334 48899999999999875433 2
Q ss_pred HHHHHHHhhhhccCCcHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhccc-----cCCCCccccHHHHHHHHHh
Q 006738 106 VDAYRSHIFQTITIPSESLLNELQTVEE---MKRQCDEKRNVCEYMLMRQREKGRS-----KNGKGETFSLQQLQEAHDE 177 (633)
Q Consensus 106 ~d~yr~nI~~tIt~PsESLLkeLk~Vee---mKkqcDekr~~YE~m~~~~~EKgr~-----k~~K~e~~i~eqle~~r~~ 177 (633)
++-+.+.|+-- ++ |+++| .=++|+..|-.|..-+....|-.-. -..|-+. +..+.+.++.-
T Consensus 86 L~~f~s~l~T~--------~~--kaI~DT~lTIk~ye~aR~EY~ay~~~~ee~~~~~~~~~~l~rve~-~q~~~~~ak~k 154 (224)
T 1i4d_A 86 VNFFVSSINTL--------VT--KTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPRDAGTRGRLES-AQATFQAHRDK 154 (224)
T ss_dssp HHHHHHHHHHH--------HH--THHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------CH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHH--------Hh--HhccHHHHHHHHHHHHhHhHHHHHhhHHHhhcccccccchhhHHH-HHHHHHHHHHH
Confidence 22223222211 11 23343 3578888888888877622222111 1112222 45778888888
Q ss_pred hHhhHhHHHHHHhhhccCCchhHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 006738 178 YDQEATLFVFRLKSLKQGQSRSLLTQAARHHAAQLSFVKKALKSLEAV 225 (633)
Q Consensus 178 fqEeaqmc~frLKsLKqgq~rsLLtqaaRhhaAQl~fF~~GLKsLE~l 225 (633)
|+---.=|.--|+=|-+++-..+=.|+..+|.|=..||.+.-+.||..
T Consensus 155 f~kLR~DV~~KleLLd~~r~kv~~~qL~~~~~al~~y~~~~~~~l~~~ 202 (224)
T 1i4d_A 155 YEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFAGNQKQLEQT 202 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 874333344445567788888889999999999999999887777653
No 11
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=97.69 E-value=0.0021 Score=64.03 Aligned_cols=172 Identities=13% Similarity=0.169 Sum_probs=104.4
Q ss_pred HHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHH-HHHHHHHH
Q 006738 56 AATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLN-ELQTVEEM 134 (633)
Q Consensus 56 aa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLk-eLk~Veem 134 (633)
.+++.-+-.|.+||++||..-... ..-.|+|.+|..+..++++|..-++.+.+.+..-+..|++.=+. +-|.|..+
T Consensus 46 ~~~~~a~~~f~dal~kia~~A~~s---~gs~elG~~L~~i~~~~r~ie~~l~~~~~~~~~~li~pL~~kie~d~K~v~~~ 122 (253)
T 2ykt_A 46 AGVTYAAKGYFDALVKMGELASES---QGSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAA 122 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS---SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 446667778999999999988642 23489999999999999999999999999999999999998777 88888766
Q ss_pred HHHH----HHHHHHHHHHHHH--HHhhccccCCCCccc----cHHHH---HHHHHhhHhhHhHHHHHHh---hhccCCch
Q 006738 135 KRQC----DEKRNVCEYMLMR--QREKGRSKNGKGETF----SLQQL---QEAHDEYDQEATLFVFRLK---SLKQGQSR 198 (633)
Q Consensus 135 Kkqc----Dekr~~YE~m~~~--~~EKgr~k~~K~e~~----i~eql---e~~r~~fqEeaqmc~frLK---sLKqgq~r 198 (633)
.|.| -.+++.|+-..+. +.+ .|++.||+.+- -.+.| ...+.++| ++|.==|+ --.-+++.
T Consensus 123 ~K~~~~e~k~~~~~l~K~~~e~~kl~-KK~k~gk~~~~~~~~~~~~~e~v~~~~~~le---~~~~~~lr~aL~EERrRyc 198 (253)
T 2ykt_A 123 LKKYQTEQRSKGDALDKCQAELKKLR-KKSQGSKNPQKYSDKELQYIDAISNKQGELE---NYVSDGYKTALTEERRRFC 198 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HC------CCCCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHhHHHHHHHHHHHHH-hhccCCCCcchhHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 5544 4455556554321 222 23334555331 11222 11122222 11111111 11235566
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccchHHHHHHh
Q 006738 199 SLLTQAARHHAAQLSFVKKALKSLEAVDPHVKMVAE 234 (633)
Q Consensus 199 sLLtqaaRhhaAQl~fF~~GLKsLE~lephVk~lae 234 (633)
.|+....-...-.++|+.+|...|...-|-...++.
T Consensus 199 flv~~~~~v~~~~~~~h~~~~~~L~~~l~~w~~l~~ 234 (253)
T 2ykt_A 199 FLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACA 234 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Confidence 666666666666677777776666655555555443
No 12
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A*
Probab=97.63 E-value=0.0024 Score=65.35 Aligned_cols=191 Identities=10% Similarity=0.075 Sum_probs=121.6
Q ss_pred hhhHHHHHHHhHh-HHHHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhH
Q 006738 28 LAQLDELAQASQD-MQDMRGCYDSLLSAAAATAN--------SAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKV 98 (633)
Q Consensus 28 ~a~ldEl~~a~qd-m~~Mk~~ydsllsaaaa~~n--------s~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~ 98 (633)
...+|+-.+..+. +..|-+.++.|...+...+. .-.+|+.++.+||.|+ +--...+....+++|-.+|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~~~L~~al~~l~~~ 241 (366)
T 3dyt_A 163 LVEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVF-SSSGYQGETDLNDAITEAGKT 241 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH-HTTCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hhccccccHHHHHHHHHHHHH
Confidence 4455555555555 78888888888877766553 3477888999999886 211112357899999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccHHHHHHHHHhh
Q 006738 99 QFELQKLVDAYRSHIFQTITIPSESLLNELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFSLQQLQEAHDEY 178 (633)
Q Consensus 99 q~EL~kL~d~yr~nI~~tIt~PsESLLkeLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~eqle~~r~~f 178 (633)
...+.++++.-..+-..++.-++..-+..|..|+|+=..-......|+..-. -.+++|. . ..+++++.+.|
T Consensus 242 ~~~i~~l~~~qa~~d~~~l~E~L~~Y~~~l~avKd~l~~r~~aL~k~~e~~k-l~~~~K~-----~---~~~~~~~~~r~ 312 (366)
T 3dyt_A 242 YEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESDK-LVATSKI-----T---LQDKQNMVKRV 312 (366)
T ss_dssp HHHHHHHHHHSGGGTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTHHH-HHHTTSS-----C---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhccCc-----c---hhHHHHHHHHH
Confidence 9999999888777666666666655555666666652222222222222210 1122322 2 35777777777
Q ss_pred HhhHhHHHHHHhhhccCCchhHHHHHHHHHHHHHHHHHHHhhhhhccchH
Q 006738 179 DQEATLFVFRLKSLKQGQSRSLLTQAARHHAAQLSFVKKALKSLEAVDPH 228 (633)
Q Consensus 179 qEeaqmc~frLKsLKqgq~rsLLtqaaRhhaAQl~fF~~GLKsLE~leph 228 (633)
+.-....-=-|.-.++.+..||=..++.|=..|..|+++.+..+|.+-+.
T Consensus 313 e~is~~~~~El~rF~~~r~~Dfk~~l~~yl~~qi~~~k~~~~~w~~~l~~ 362 (366)
T 3dyt_A 313 SIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSR 362 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 73222211112245566677888888888888999999999988877554
No 13
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=97.57 E-value=0.0041 Score=62.32 Aligned_cols=106 Identities=14% Similarity=0.275 Sum_probs=79.9
Q ss_pred hHh-HHHHHHHH---HHHHHHH-------HHHhhhHHHHHHHHHHHhhhhhhhcccC-CchhhhHHHHHHHhHHHHHHHH
Q 006738 38 SQD-MQDMRGCY---DSLLSAA-------AATANSAYEFSESLQELGACLLEKTALN-DNEESGKVLLMLGKVQFELQKL 105 (633)
Q Consensus 38 ~qd-m~~Mk~~y---dsllsaa-------aa~~ns~yefsEaleemGscll~kta~~-dd~e~g~v~l~lgk~q~EL~kL 105 (633)
.|. |.+||+.| +.|+++| .+++.-+-.|.+|++++|..-. . .. .-.|+|.+|..+..++++|..-
T Consensus 19 ~~~ii~~mk~~~P~~e~lv~~g~ky~~al~~~~~a~~af~Da~qKvad~A~-~--s~g~s~elG~~L~~i~~~hr~ie~~ 95 (253)
T 2d1l_A 19 FQTIISDMKGSYPVWEDFINKAGKLQSQLRTTVVAAAAFLDAFQKVADMAT-N--TRGGTREIGSALTRMCMRHRSIEAK 95 (253)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T--SSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-c--CCcchHHHHHHHHHHHHHHHHHHHH
Confidence 455 77777655 3344444 3456667789999999999875 2 22 2579999999999999999999
Q ss_pred HHHHHHHhhhhccCCcHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 006738 106 VDAYRSHIFQTITIPSESLLN-ELQTVEEMKRQCDEKRNVCE 146 (633)
Q Consensus 106 ~d~yr~nI~~tIt~PsESLLk-eLk~VeemKkqcDekr~~YE 146 (633)
++...+.+.+-+..|+|.=+. +-|.+-.|-|-|.+-++-|.
T Consensus 96 l~~~~k~~~~eli~pLe~k~e~d~k~~~~~~K~~~~~~k~~r 137 (253)
T 2d1l_A 96 LRQFSSALIDCLINPLQEQMEEWKKVANQLDKDHAKEYKKAR 137 (253)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888 88888766555544444433
No 14
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=97.25 E-value=0.024 Score=58.75 Aligned_cols=187 Identities=9% Similarity=0.060 Sum_probs=119.9
Q ss_pred hhhHHHHHHHhHh-HHHHHHHHHHHHHHHHHHhhh--------HHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhH
Q 006738 28 LAQLDELAQASQD-MQDMRGCYDSLLSAAAATANS--------AYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKV 98 (633)
Q Consensus 28 ~a~ldEl~~a~qd-m~~Mk~~ydsllsaaaa~~ns--------~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~ 98 (633)
..++++-.+..+. +.+|-+.+..|...+...+.. -.+++.++..||.++- .-...+....+++|-.+|.+
T Consensus 183 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~r~~~~~~~e~~~l~~~l~~l~~~~~-~~~~~~~~~Ls~aL~~l~~~ 261 (386)
T 4akv_A 183 LQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGGFRKEFQKLGSAFQAISHSFQ-MDPPFCSEALNSAISHTGRT 261 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTT-SSGGGSCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hccccccHHHHHHHHHHHHH
Confidence 4455666666555 777777777777766554433 2356788888888762 11112567899999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccHHHHHHHHHhh
Q 006738 99 QFELQKLVDAYRSHIFQTITIPSESLLNELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFSLQQLQEAHDEY 178 (633)
Q Consensus 99 q~EL~kL~d~yr~nI~~tIt~PsESLLkeLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~eqle~~r~~f 178 (633)
...+.+++..-..+-..++.-++.-.+..|..++|+=..-..+...|+..- +-.+++ |.+ ..+++++.+.|
T Consensus 262 ~e~i~~l~~~Qa~~d~~~L~E~L~~Y~~ll~s~Kdll~~R~~aL~k~~ea~-kl~~~~-----K~~---~~~~~e~~~r~ 332 (386)
T 4akv_A 262 YEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKESQ-RMSDEG-----RMV---QDEADGIRRRC 332 (386)
T ss_dssp HHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTT-----SSC---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhC-----Ccc---HHHHHHHHHHH
Confidence 999998888877777777666666666677777765333222322333221 011233 322 35666666666
Q ss_pred HhhHhHHHHHHh----hhccCCchhHHHHHHHHHHHHHHHHHHHhhhhhccchH
Q 006738 179 DQEATLFVFRLK----SLKQGQSRSLLTQAARHHAAQLSFVKKALKSLEAVDPH 228 (633)
Q Consensus 179 qEeaqmc~frLK----sLKqgq~rsLLtqaaRhhaAQl~fF~~GLKsLE~leph 228 (633)
+ -..+.++ -.+..+..++-..++.|=..|+.|+++-+..+|.+-+.
T Consensus 333 e----~IS~~~~~El~rF~~~Rv~Dfk~~l~eyle~qi~~~~~~~~~le~~l~~ 382 (386)
T 4akv_A 333 R----VVGFALQAEMNHFHQRRELDFKHMMQNYLRQQILFYQRVGQQLEKTLRM 382 (386)
T ss_dssp H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6 2233333 44566677888888888888999999998888877654
No 15
>3ok8_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 2; I-BAR, protein binding; 2.25A {Mus musculus}
Probab=96.84 E-value=0.099 Score=51.79 Aligned_cols=122 Identities=13% Similarity=0.168 Sum_probs=85.0
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhh
Q 006738 36 QASQDMQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQ 115 (633)
Q Consensus 36 ~a~qdm~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~ 115 (633)
-+-+++-.+-+.|..-+.+. +.-+..|..|+++||...+...+ -.|+|.||+.++.++++|+.=++...+-...
T Consensus 27 P~l~nlv~lg~~Y~kAl~a~---~~A~~~y~dA~~Kige~A~~S~~---skeLG~vL~qis~~hR~i~~~le~~~k~f~~ 100 (222)
T 3ok8_A 27 PALENLVYLGNNYLRAFHAL---SEAAEVYFSAIQKIGEQALQSST---SQILGEILVQMSDTQRHLNSDLEVVVQTFHG 100 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHSSS---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhccCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555443333 33447899999999999875433 4799999999999999999888877666667
Q ss_pred hccCCcHHHHH-HHHHHHHHHHHHHHHHHH----HHHHHHHHHhhccccCCCCc
Q 006738 116 TITIPSESLLN-ELQTVEEMKRQCDEKRNV----CEYMLMRQREKGRSKNGKGE 164 (633)
Q Consensus 116 tIt~PsESLLk-eLk~VeemKkqcDekr~~----YE~m~~~~~EKgr~k~~K~e 164 (633)
-+-.|+|-=++ |-+.+.+.-|.|...++. ||-..+ ..-|.++|..|+.
T Consensus 101 elI~pLE~k~e~D~k~i~~~~K~y~~e~k~~~~~leK~~~-elkK~~rksqk~~ 153 (222)
T 3ok8_A 101 DLLQHMEKNTKLDMQFIKDSCQHYEIEYRHRAANLEKCMS-ELWRMERKRDKNA 153 (222)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTTCTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH-HHHHhhhhhccCh
Confidence 77789998888 888888666666655544 555433 4555656655543
No 16
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=96.07 E-value=0.2 Score=49.07 Aligned_cols=80 Identities=10% Similarity=0.072 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcc-cCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccC
Q 006738 41 MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTA-LNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITI 119 (633)
Q Consensus 41 m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta-~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~ 119 (633)
+.+|.++|+- =+.-+.+|+..|.+|+.-...+.. ..+.+-+..+|..|-.-...+......+..+|.+.|.-
T Consensus 45 ~~el~~f~ke-------Ra~iE~eYak~L~kLakk~~~~~~~~~e~gtl~~aw~~i~~e~e~~a~~H~~~a~~L~~~v~~ 117 (312)
T 3abh_A 45 CSDLMNCLHE-------RARIEKAYAQQLTEWARRWRQLVEKGPQYGTVEKAWMAFMSEAERVSELHLEVKASLMNDDFE 117 (312)
T ss_dssp HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6667666654 355678899999999887764321 12233444556666666666666777777888888877
Q ss_pred CcHHHHHH
Q 006738 120 PSESLLNE 127 (633)
Q Consensus 120 PsESLLke 127 (633)
|+..+.+|
T Consensus 118 ~l~~~~~~ 125 (312)
T 3abh_A 118 KIKNWQKE 125 (312)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88766554
No 17
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=95.98 E-value=1.1 Score=43.09 Aligned_cols=82 Identities=7% Similarity=0.080 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCC----chhhhHHHHHHHhHHHHHHHHHHHHHHHhhhh
Q 006738 41 MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALND----NEESGKVLLMLGKVQFELQKLVDAYRSHIFQT 116 (633)
Q Consensus 41 m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~d----d~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~t 116 (633)
+++|.++|+-- +.-..+|+..|.+|+.-++.+....+ +.-+..+|..|-.....+......+..+|.+.
T Consensus 23 ~~el~~f~keR-------a~iE~eYak~L~kLakk~~~~~~~~~~~~~~~t~~~~w~~~l~~~e~~a~~h~~~a~~L~~~ 95 (301)
T 2efk_A 23 LDRYVKFVKER-------TEVEQAYAKQLRSLVKKYLPKRPAKDDPESKFSQQQSFVQILQEVNDFAGQRELVAENLSVR 95 (301)
T ss_dssp HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHSCC-------CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777642 44567899999999888764421111 12445666666666677777777788888777
Q ss_pred ccCCcHHHHHHHH
Q 006738 117 ITIPSESLLNELQ 129 (633)
Q Consensus 117 It~PsESLLkeLk 129 (633)
|.-|+..+.++++
T Consensus 96 v~~~l~~~~~~~~ 108 (301)
T 2efk_A 96 VCLELTKYSQEMK 108 (301)
T ss_dssp THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888887776543
No 18
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=95.84 E-value=0.32 Score=46.68 Aligned_cols=82 Identities=10% Similarity=0.101 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCc----hhhhHHHHHHHhHHHHHHHHHHHHHHHhhhh
Q 006738 41 MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDN----EESGKVLLMLGKVQFELQKLVDAYRSHIFQT 116 (633)
Q Consensus 41 m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd----~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~t 116 (633)
+++|.++|+-- +.-..+|+..|.+|+.-...+....++ .-+..+|..|-.....+......+..+|.+.
T Consensus 30 ~~el~~f~~eR-------a~iE~eYak~L~kLa~~~~~~~~~~~~~~~~~t~~~aw~~~~~~~e~~a~~h~~~a~~l~~~ 102 (305)
T 2efl_A 30 LEKYIKFVKER-------TEIELSYAKQLRNLSKKYQPKKNSKEEEEYKYTSCKAFISNLNEMNDYAGQHEVISENMASQ 102 (305)
T ss_dssp HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHTSCC-------CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHhccccccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666543 455779999999999888654321222 2344566666666666777777888888888
Q ss_pred ccCCcHHHHHHHH
Q 006738 117 ITIPSESLLNELQ 129 (633)
Q Consensus 117 It~PsESLLkeLk 129 (633)
|.-|+..+.++++
T Consensus 103 v~~~l~~~~~~~~ 115 (305)
T 2efl_A 103 IIVDLARYVQELK 115 (305)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877655
No 19
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=95.61 E-value=0.81 Score=44.34 Aligned_cols=81 Identities=7% Similarity=0.015 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcc-cCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccC
Q 006738 41 MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTA-LNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITI 119 (633)
Q Consensus 41 m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta-~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~ 119 (633)
+.+|.++|+- -+.-..+|+..|.+|+..+..+.. .++-+-+..+|..+-.....+......+..+|.+.|.-
T Consensus 24 ~~el~~f~ke-------Ra~iE~~Yak~L~kL~~~~~~~~~~~~~~gs~~~aw~~~~~~~e~~a~~h~~~a~~l~~~v~~ 96 (290)
T 3i2w_A 24 CNDLQQLIQE-------RADIEKGYAKSLRTWSKKWGELIEKGPEYGTTEAAWKGVLTESERISDVHMKIKDNLCNDVNS 96 (290)
T ss_dssp HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666654 355678899999999987653211 11223344556666566666777777888888888888
Q ss_pred CcHHHHHHH
Q 006738 120 PSESLLNEL 128 (633)
Q Consensus 120 PsESLLkeL 128 (633)
|+..+.+|+
T Consensus 97 ~l~~~~~e~ 105 (290)
T 3i2w_A 97 QIKTWQKEN 105 (290)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988888776
No 20
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=95.53 E-value=0.68 Score=46.31 Aligned_cols=139 Identities=17% Similarity=0.211 Sum_probs=85.1
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHHHHH
Q 006738 33 ELAQASQDMQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYRSH 112 (633)
Q Consensus 33 El~~a~qdm~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~n 112 (633)
|+....++|.++- ++++.+-.+.+-....-+++|-+-|.. +|++++.|.-+||+.-+|+-.+.+.|..|
T Consensus 20 e~sr~L~~LIk~E---K~vi~s~e~~are~~~~A~~Ls~WG~~--------edddl~DIsdklgvLl~e~ge~e~~~a~~ 88 (234)
T 3plt_A 20 ELARKLSQLVKTE---KGVLRAMEVVASERREAAKQLSLWGAD--------NDDDVSDVTDKLGVLIYELGELQDQFIDK 88 (234)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHT--------SCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444 444444433444444556666666654 36899999999999999999999999999
Q ss_pred hhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccHHHHHHHHHhhHhhHhHHHHH
Q 006738 113 IFQTITIPSESLLNELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFSLQQLQEAHDEYDQEATLFVFR 188 (633)
Q Consensus 113 I~~tIt~PsESLLkeLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~eqle~~r~~fqEeaqmc~fr 188 (633)
.-.. -.-||.++..|+==++.-..|+--...++ +.++....+.|-..+-.|=...+.+.--+|+||-.|.
T Consensus 89 ~d~y-----R~~LK~IR~~E~svqp~R~~R~~l~~~I~-kLk~k~P~s~kl~~LeqELvraEae~lvaEAqL~n~k 158 (234)
T 3plt_A 89 YDQY-----RVTLKSIRNIEASVQPSRDRKEKITDEIA-HLKYKDPQSTKIPVLEQELVRAEAESLVAEAQLSNIT 158 (234)
T ss_dssp HHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-----HHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhccCCCCchHHHHHHHHHHHHHHhhHHHHHHHHhH
Confidence 8764 56788888888444454444444455554 4444344444433322232334555666777776654
No 21
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=95.27 E-value=0.2 Score=51.84 Aligned_cols=92 Identities=13% Similarity=0.081 Sum_probs=59.5
Q ss_pred HHHHHHHhHh-HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCc--hhhhHHHHHHHhHHHHHHHHHH
Q 006738 31 LDELAQASQD-MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDN--EESGKVLLMLGKVQFELQKLVD 107 (633)
Q Consensus 31 ldEl~~a~qd-m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd--~e~g~v~l~lgk~q~EL~kL~d 107 (633)
|..-++...+ +++|++||.-= |.-..+|+..|.+|+.-++.+....++ .-+..+|..|-.-+..+.+++.
T Consensus 17 L~kr~~~g~~lledl~~F~reR-------A~IE~eYAk~L~kLakk~~~k~~~~~~~~~tl~~aW~~ll~ete~~a~~H~ 89 (406)
T 4dyl_A 17 LQQMQEAELRLLEGMRKWMAQR-------VKSDREYAGLLHHMSLQDSGGQSRAISPDSPISQSWAEITSQTEGLSRLLR 89 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHC------------CCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhcccccCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444 89999999763 455788999999999888754332222 2234677777777777888888
Q ss_pred HHHHHhhhhccCCcHHHHHHHH
Q 006738 108 AYRSHIFQTITIPSESLLNELQ 129 (633)
Q Consensus 108 ~yr~nI~~tIt~PsESLLkeLk 129 (633)
.+..+|.+.|.-++..+.+|++
T Consensus 90 ~lae~L~~~v~~~l~~~~ke~~ 111 (406)
T 4dyl_A 90 QHAEDLNSGPLSKLSLLIRERQ 111 (406)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888888888754
No 22
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=95.13 E-value=0.81 Score=43.46 Aligned_cols=77 Identities=9% Similarity=0.005 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCC
Q 006738 41 MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIP 120 (633)
Q Consensus 41 m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~P 120 (633)
+.+|.++|+-- +.-..+|+..|.+|+.-.... ..-+-...++..|-.....+......+..+|. .|.-|
T Consensus 34 ~~el~~f~~eR-------a~iE~eYak~L~kLa~~~~~~---~~~gs~~~~w~~~~~~~e~~a~~h~~~a~~l~-~~~~~ 102 (276)
T 2v0o_A 34 TKELADFVRER-------ATIEEAYSRSMTKLAKSASNY---SQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQ-ELIKE 102 (276)
T ss_dssp HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHTS---CCCSSSGGGHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHHhcCCC---CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 77777776643 455678888888888776521 12223334555555555566666777777774 44467
Q ss_pred cHHHHHHH
Q 006738 121 SESLLNEL 128 (633)
Q Consensus 121 sESLLkeL 128 (633)
+..+.+|+
T Consensus 103 l~~~~~~~ 110 (276)
T 2v0o_A 103 VQKYGEEQ 110 (276)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776654
No 23
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=94.97 E-value=1.4 Score=43.54 Aligned_cols=79 Identities=8% Similarity=0.125 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhh---HHHHHHHhHHHHHHHHHHHHHHHhhhhc
Q 006738 41 MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESG---KVLLMLGKVQFELQKLVDAYRSHIFQTI 117 (633)
Q Consensus 41 m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g---~v~l~lgk~q~EL~kL~d~yr~nI~~tI 117 (633)
+++|.++|+- =+.-..+|+..|.+|+.-...+.. ++++.| .+|..|-.-...+......+..+|.+.|
T Consensus 36 ~~el~~f~ke-------Ra~iE~eYak~L~kLakk~~~~~~--~~~~~gtl~~aw~~~~~e~e~~a~~H~~~a~~L~~~v 106 (337)
T 2x3v_A 36 CNDLMSCVQE-------RAKIEKAYAQQLTDWAKRWRQLIE--KGPQYGSLERAWGAMMTEADKVSELHQEVKNSLLNED 106 (337)
T ss_dssp HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhhcc--CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666654 355678999999999988765422 123345 5566555556666667777777887777
Q ss_pred cCCcHHHHHHH
Q 006738 118 TIPSESLLNEL 128 (633)
Q Consensus 118 t~PsESLLkeL 128 (633)
.-|+..+.+|+
T Consensus 107 ~~~l~~~~~e~ 117 (337)
T 2x3v_A 107 LEKVKNWQKDA 117 (337)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78888776653
No 24
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=94.80 E-value=3 Score=44.08 Aligned_cols=84 Identities=10% Similarity=0.062 Sum_probs=56.6
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhccc-CCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhh
Q 006738 38 SQDMQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTAL-NDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQT 116 (633)
Q Consensus 38 ~qdm~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~-~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~t 116 (633)
.+.+++|.++++- =+.-+.+|+..|.+|+..+..+... .+-+-+..+|..|-.....+......+..+|.+.
T Consensus 35 ~~~~~el~~f~ke-------Ra~iE~eYAk~L~kLakk~~~~~~~~~e~gtl~~aw~~~~~e~e~~a~~H~~~a~~L~~~ 107 (486)
T 3haj_A 35 HRLCSDLMNCLHE-------RARIEKAYAQQLTEWARRWRQLVEKGPQYGTVEKAWMAFMSEAERVSELHLEVKASLMND 107 (486)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHSSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3336677766655 3566788999999999866432111 1223455666666666667777777888888888
Q ss_pred ccCCcHHHHHHH
Q 006738 117 ITIPSESLLNEL 128 (633)
Q Consensus 117 It~PsESLLkeL 128 (633)
|.-|+..+.+|.
T Consensus 108 v~~~l~~~~~e~ 119 (486)
T 3haj_A 108 DFEKIKNWQKEA 119 (486)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 888888877664
No 25
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=94.58 E-value=1.8 Score=43.27 Aligned_cols=80 Identities=10% Similarity=0.081 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhccc-CCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccC
Q 006738 41 MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTAL-NDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITI 119 (633)
Q Consensus 41 m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~-~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~ 119 (633)
+++|.++|+- =+.-+.+|+..|.+|+.-...+... .+.+-+..+|..|-.-...+......+..+|.+.|.-
T Consensus 45 ~~el~~f~ke-------Ra~IE~eYak~L~kLakk~~~~~~~~~e~gtl~~aw~~l~~e~e~~a~~H~~la~~L~~~v~~ 117 (350)
T 3aco_A 45 CSDLMNCLHE-------RARIEKAYAQQLTEWARRWRQLVEKGPQYGTVEKAWMAFMSEAERVSELHLEVKASLMNDDFE 117 (350)
T ss_dssp HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677777654 3556788999999999887644211 1223333455555555555666667777777777777
Q ss_pred CcHHHHHH
Q 006738 120 PSESLLNE 127 (633)
Q Consensus 120 PsESLLke 127 (633)
|+..+.+|
T Consensus 118 ~l~~~~~e 125 (350)
T 3aco_A 118 KIKNWQKE 125 (350)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 77766444
No 26
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=91.50 E-value=12 Score=37.31 Aligned_cols=79 Identities=10% Similarity=0.059 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcc-cCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccC
Q 006738 41 MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTA-LNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITI 119 (633)
Q Consensus 41 m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta-~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~ 119 (633)
+.+|.++|.- =+.-+.+|+..|.+|+.-+..... ...-+-+..+|..|-.-...+......+..+|.+.|.-
T Consensus 36 ~~el~~f~ke-------Ra~iE~~Yak~L~kLakk~~~~~~~~~e~gsl~~aw~~i~~e~e~~a~~H~~~a~~l~~~v~~ 108 (320)
T 3m3w_A 36 CGDLVSCFQE-------RARIEKAYAQQLADWARKWRGAVEKGPQYGTLEKAWHAFFTAAERLSELHLEVREKLHGPDSE 108 (320)
T ss_dssp HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhhccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777777654 355578899999999986543211 11223444566666666666777777888888888888
Q ss_pred CcHHHHH
Q 006738 120 PSESLLN 126 (633)
Q Consensus 120 PsESLLk 126 (633)
|+..+.+
T Consensus 109 ~l~~~~k 115 (320)
T 3m3w_A 109 RVRTWQR 115 (320)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8876654
No 27
>3g9g_A Suppressor of yeast profilin deletion; SYP1, BAR domain, FCH, adaptor, endocytosis, phosphoprotein; 2.40A {Saccharomyces cerevisiae}
Probab=86.15 E-value=31 Score=34.99 Aligned_cols=185 Identities=12% Similarity=0.130 Sum_probs=97.1
Q ss_pred chhhHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhh-----------hhhccc----------CCc
Q 006738 27 PLAQLDELAQASQDMQDMRGCYDSLLSAAAATANSAYEFSESLQELGACL-----------LEKTAL----------NDN 85 (633)
Q Consensus 27 p~a~ldEl~~a~qdm~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscl-----------l~kta~----------~dd 85 (633)
|..+.+-|.+- |...+..-+-|..---.-+.=..+|+..|.++..-. |++.++ +.=
T Consensus 41 P~qa~~iL~~R---l~~~k~i~keL~~f~kERa~IEe~YakqLrkLakk~~~l~k~~~~~~~~~~vlt~ee~~~~~~~e~ 117 (287)
T 3g9g_A 41 PYEATETIRIR---LSQVKLLNKDFYLLFKELANLKRNYAQQLRKIIAENEDITKILNAQMIESNVLTPQEMSAFRFNSL 117 (287)
T ss_dssp HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHTTSSCHHHHHHCCCCCS
T ss_pred hHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccchhhcccccccc
Confidence 54444444333 445555555555555556666788888888887743 223221 112
Q ss_pred hhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 006738 86 EESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLN---ELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGK 162 (633)
Q Consensus 86 ~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLk---eLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K 162 (633)
+....+|..|-.-...+..+...+..+|.+-|.-|+-.... +++..+.+.++ .+.+ +.++|+-++|
T Consensus 118 G~l~~~W~~v~~e~e~~a~~H~~la~~L~~ev~~pL~~~~e~~~~~~e~~~l~~~-------L~~~-ak~le~~~kk--- 186 (287)
T 3g9g_A 118 GELRNVWDTVIEELKSDLKSSTEYYNTLDQQVVRELKESVENNTSWRESKDLHSK-------LSKN-AASIEHYSKN--- 186 (287)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHCSSSSCHHHHHHHHHHHH-------HHHH-HHHHHHCSSC---
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH-------HHHH-HHHHHHHHhh---
Confidence 33445555555555555555566666666555444443332 22222222222 2333 3466766554
Q ss_pred CccccHHHHHHHHHhhHhhHhHHHHHHhhhccC---CchhHHHHHHHHHHHHHH----HHHHHhhhhhccch
Q 006738 163 GETFSLQQLQEAHDEYDQEATLFVFRLKSLKQG---QSRSLLTQAARHHAAQLS----FVKKALKSLEAVDP 227 (633)
Q Consensus 163 ~e~~i~eqle~~r~~fqEeaqmc~frLKsLKqg---q~rsLLtqaaRhhaAQl~----fF~~GLKsLE~lep 227 (633)
.+ .-..|+.++.+++.++-.|--.|..|... .-+++|++.+-|...+|. -..+.+.+|+.+++
T Consensus 187 ~~--a~~~le~a~~qWes~aP~~fe~fQ~lEEeRL~~Lkd~L~~y~~~~sd~~~~~~~~~E~~~~~ll~~dv 256 (287)
T 3g9g_A 187 NE--NSSHLEEARRQWDQQSPYLFELFETIDYNRLDTLKNCMLRFQTSFSDYLLNTTKECETVMTKFLAFEP 256 (287)
T ss_dssp CS--CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_pred HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 22 23468888888888887776655544443 345666666666655543 23334444444443
No 28
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=83.99 E-value=35 Score=33.65 Aligned_cols=20 Identities=10% Similarity=0.034 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 006738 129 QTVEEMKRQCDEKRNVCEYM 148 (633)
Q Consensus 129 k~VeemKkqcDekr~~YE~m 148 (633)
+.|+..|+.|+.+.++||..
T Consensus 148 ~~l~KaKk~Y~~~c~e~e~a 167 (337)
T 2x3v_A 148 KELEAAKKAYHLACKEERLA 167 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44556677777777776653
No 29
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=82.40 E-value=21 Score=35.55 Aligned_cols=23 Identities=17% Similarity=0.172 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 006738 128 LQTVEEMKRQCDEKRNVCEYMLM 150 (633)
Q Consensus 128 Lk~VeemKkqcDekr~~YE~m~~ 150 (633)
++.|+..|+.|+.+.+++|....
T Consensus 156 ~~~l~KaKk~Y~~~c~e~e~a~~ 178 (350)
T 3aco_A 156 LKEVEAAKKAHHAACKEEKLAIS 178 (350)
T ss_dssp HHHHHHTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788888888888877653
No 30
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=78.08 E-value=7.8 Score=41.35 Aligned_cols=48 Identities=17% Similarity=0.128 Sum_probs=33.5
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccC--CCCcccc
Q 006738 117 ITIPSESLLNELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKN--GKGETFS 167 (633)
Q Consensus 117 It~PsESLLkeLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~--~K~e~~i 167 (633)
|..--+.+...++++++|+.-|+.--..|...+. |=.|||. .|..++.
T Consensus 310 l~~fk~~~~~~~~~~~~L~~~Y~~f~~aY~~lL~---Ev~RRr~~~~~~~~i~ 359 (413)
T 4hpq_C 310 IQKFKASCLEDIRQTRNLLDFYANFERSYHNLLK---EVKRRKETAAKLSQIL 359 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 3334466777888899999999999999999887 4444443 4444444
No 31
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=77.12 E-value=67 Score=32.67 Aligned_cols=44 Identities=20% Similarity=0.190 Sum_probs=39.0
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhh
Q 006738 36 QASQDMQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEK 79 (633)
Q Consensus 36 ~a~qdm~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~k 79 (633)
....++..|++-.+.|+..+-..++..-+|..|...|..+|..-
T Consensus 48 ~~E~~~~~l~~~l~kl~k~~~~~~~~~~~~~~a~~~f~~~l~~~ 91 (407)
T 4h8s_A 48 VFEEDAGTLTDYTNQLLQAMQRVYGAQNEMCLATQQLSKQLLAY 91 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34556999999999999999999999999999999999999744
No 32
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=75.85 E-value=71 Score=32.26 Aligned_cols=73 Identities=14% Similarity=0.094 Sum_probs=49.3
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcc--cCCchhhhHHHHHHHhHHHHHHHH
Q 006738 33 ELAQASQDMQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTA--LNDNEESGKVLLMLGKVQFELQKL 105 (633)
Q Consensus 33 El~~a~qdm~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta--~~dd~e~g~v~l~lgk~q~EL~kL 105 (633)
.+.....++..|++..+.|+..+-...+..-+|+.|.+.+..+|++-.. ...-.+-+.+--.|-+|..=|+.+
T Consensus 22 ~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~~~~~d~~v~~~l~~f~~~~~ei 96 (385)
T 2q13_A 22 LLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVIDEL 96 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCCC---CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 3344566799999999999999999999999999999999999984321 012224444444444444433333
No 33
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=70.24 E-value=73 Score=30.01 Aligned_cols=75 Identities=17% Similarity=0.140 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHHH----HHHHHHHHHHH
Q 006738 63 YEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLNE----LQTVEEMKRQC 138 (633)
Q Consensus 63 yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLke----Lk~VeemKkqc 138 (633)
..+.+.++.+|.+.. ..+ ..+..+.-.|..+..|+.+..+.+...+-.+ ..+.++ ++.|+..|+.|
T Consensus 76 ~~~~~~~e~~a~~h~-~~a----~~l~~~~~~l~~~~~~~~~~rK~~~~~~~~~-----~~~~~~~~~~~~~l~Kak~~Y 145 (276)
T 2v0o_A 76 DVFKTSTEKLANCHL-DLV----RKLQELIKEVQKYGEEQVKSHKKTKEEVAGT-----LEAVQTIQSITQALQKSKENY 145 (276)
T ss_dssp HHHHHHHHHHHHHHH-HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHH-----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 455666666776664 323 1222344455555566655555554332211 122222 34455667777
Q ss_pred HHHHHHHHH
Q 006738 139 DEKRNVCEY 147 (633)
Q Consensus 139 Dekr~~YE~ 147 (633)
+.+.+++|.
T Consensus 146 ~~~c~e~e~ 154 (276)
T 2v0o_A 146 NAKCVEQER 154 (276)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777764
No 34
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=69.98 E-value=77 Score=30.15 Aligned_cols=22 Identities=14% Similarity=0.194 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 006738 129 QTVEEMKRQCDEKRNVCEYMLM 150 (633)
Q Consensus 129 k~VeemKkqcDekr~~YE~m~~ 150 (633)
..++..|+.|+.+-+++|....
T Consensus 137 ~~l~KaK~~Y~~~~~e~e~a~~ 158 (305)
T 2efl_A 137 KQLESSKRRFERDCKEADRAQQ 158 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3455677788888777776544
No 35
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=67.55 E-value=85 Score=29.68 Aligned_cols=153 Identities=13% Similarity=0.085 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHH-HHHhHHHHHHHHHHHHHHHhhhhccC
Q 006738 41 MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLL-MLGKVQFELQKLVDAYRSHIFQTITI 119 (633)
Q Consensus 41 m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l-~lgk~q~EL~kL~d~yr~nI~~tIt~ 119 (633)
+.++.+..+..+.+--+..++.-.|.++|.++...-... ..+-..+|..+- .+..+..+ ...+++..|..
T Consensus 68 ~~~l~k~~k~y~~~~~~~~~~~~~l~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~d~~~~-------l~~~vi~Pl~~ 138 (251)
T 2fic_A 68 GTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPG--RDEANKIAENNDLLWMDYHQK-------LVDQALLTMDT 138 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSTT--HHHHHHHHHHHHHHHHHHHHH-------HHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCC--chhHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHH
Confidence 555555555555555556666778889888853222100 000112344443 12222222 22344444444
Q ss_pred CcHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccHHHHHHHHHhhHhhHhHHHHHHhhhccC
Q 006738 120 PSESLLNEL----QTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFSLQQLQEAHDEYDQEATLFVFRLKSLKQG 195 (633)
Q Consensus 120 PsESLLkeL----k~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~eqle~~r~~fqEeaqmc~frLKsLKqg 195 (633)
=+ +.++++ +.-+.-+--||..+..|+.+.. +.+|.-.+..|.+. -.++.+..++.+.+++.--.-+|..++..
T Consensus 139 ~~-~~~~~i~~~ikKR~~k~lDyD~~~~~l~kl~~-k~~kd~~kl~kae~-el~~ak~~ye~ln~~L~~eLp~l~~~~~~ 215 (251)
T 2fic_A 139 YL-GQFPDIKSRIAKRGRKLVDYDSARHHYESLQT-AKKKDEAKIAKAEE-ELIKAQKVFEEMNVDLQEELPSLWNSRVG 215 (251)
T ss_dssp HH-HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-HHhHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-cCcCcHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 334433 3333555568888777776553 22222223333222 23444444444444444444444555544
Q ss_pred CchhHHHHHH
Q 006738 196 QSRSLLTQAA 205 (633)
Q Consensus 196 q~rsLLtqaa 205 (633)
-...+|+.++
T Consensus 216 ~~~~~l~~f~ 225 (251)
T 2fic_A 216 FYVNTFQSIA 225 (251)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 36
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=63.48 E-value=1.1e+02 Score=29.32 Aligned_cols=57 Identities=18% Similarity=0.134 Sum_probs=30.0
Q ss_pred HHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006738 94 MLGKVQFELQKLVDAYRSHIFQTITIPSESLLNELQTVEEMKRQCDEKRNVCEYMLMRQREK 155 (633)
Q Consensus 94 ~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLkeLk~VeemKkqcDekr~~YE~m~~~~~EK 155 (633)
.|..+..+..+..+.+..++... -..|.+=.+.++..|+.|+...+++|.... +.++
T Consensus 99 ~l~~~~~~~~~~rK~~~~~~~k~----~k~~~~~~~~l~KaKk~Y~~~~~e~e~a~~-~~~~ 155 (301)
T 2efk_A 99 ELTKYSQEMKQERKMHFQEGRRA----QQQLENGFKQLENSKRKFERDCREAEKAAQ-TAER 155 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHh
Confidence 34445555555555544443332 111222244556778888888888876654 4444
No 37
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=61.65 E-value=32 Score=37.36 Aligned_cols=35 Identities=9% Similarity=0.221 Sum_probs=26.6
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhh
Q 006738 38 SQDMQDMRGCYDSLLSAAAATANSAYEFSESLQELGACL 76 (633)
Q Consensus 38 ~qdm~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscl 76 (633)
..++++|+++.+.| +..+.++++++++|+..-.-.
T Consensus 99 ~~~LqeLe~~l~~l----sn~Ts~~~~~i~~Iq~slk~~ 133 (464)
T 1m1j_B 99 KPVLRDLKDRVAKF----SDTSTTMYQYVNMIDNKLVKT 133 (464)
T ss_dssp HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHH----hhhhhHHHHHHHHHHHHhhcc
Confidence 34589999999888 456778899998887765444
No 38
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens}
Probab=57.81 E-value=1.3e+02 Score=30.66 Aligned_cols=162 Identities=15% Similarity=0.125 Sum_probs=79.2
Q ss_pred chhhHHHHHHHhHh-HHHHHHHHHHHHH----HHHHHhhhHHHHHHHHHHHhh---hhhhhcccCCchhhhHHHHH----
Q 006738 27 PLAQLDELAQASQD-MQDMRGCYDSLLS----AAAATANSAYEFSESLQELGA---CLLEKTALNDNEESGKVLLM---- 94 (633)
Q Consensus 27 p~a~ldEl~~a~qd-m~~Mk~~ydslls----aaaa~~ns~yefsEaleemGs---cll~kta~~dd~e~g~v~l~---- 94 (633)
|..++|...++..| |..++...+.++. +-.. -.-.--..+.+++|.+ .+-++...--++-.+++--.
T Consensus 30 ~~~~~e~v~~~fwdY~~~~~~~a~~~~eql~~s~l~-kel~~l~~~~~~el~~y~~~l~~qL~P~~~e~~~~l~~~~~~L 108 (307)
T 2l7b_A 30 SGQRWELALGRFWDYLRWVQTLSEQVQEELLSSQVT-QELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAA 108 (307)
T ss_dssp TCSHHHHHHHHHHHHHHHTCCCSTHHHHHTTSCHHH-HHHHHHHHHHHHHHHHHHHHHTTCCCSCCSSTHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHhHHHH
Confidence 66678888888888 7766554444441 1110 0001123344444433 12222111123444444433
Q ss_pred ---HHhHHHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccHHH
Q 006738 95 ---LGKVQFELQKLVDAYRSHIFQTITIPSESLLNELQTVE-EMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFSLQQ 170 (633)
Q Consensus 95 ---lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLkeLk~Ve-emKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~eq 170 (633)
|++---||..=+.-|+.-+-.-|.-=+|.|=..|.-+- ||+.+.+..-+.-...++-+.|+-|.+.... -|+
T Consensus 109 r~~L~~dlEelR~~L~Py~~el~~~l~~~~eelr~kL~Py~~EL~~~~~~~~eeLr~~L~py~eeLr~kl~~~----vee 184 (307)
T 2l7b_A 109 QARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVYQAGAREGAERG----LSA 184 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSSHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhHHHHHHHHHHHH----HHH
Confidence 33333334444444444455555555555555554443 7777777766666666666666666553322 144
Q ss_pred HHHHH----HhhHhhHhHHHHHHh--hhcc
Q 006738 171 LQEAH----DEYDQEATLFVFRLK--SLKQ 194 (633)
Q Consensus 171 le~~r----~~fqEeaqmc~frLK--sLKq 194 (633)
|+... ++|++.+. |+=.+| .|++
T Consensus 185 lr~~L~Py~e~~~~~~~-~v~~~k~~~L~~ 213 (307)
T 2l7b_A 185 IRERLGPLVEQGRVRAA-TVGSLAGQPLQE 213 (307)
T ss_dssp HHHHCSSSCTTTTTHHH-HHHHHHCCCCSS
T ss_pred HHHHhhhHHHHHHHHHh-hhhhhhhHHHHH
Confidence 44433 45565554 544444 4444
No 39
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=57.41 E-value=92 Score=31.07 Aligned_cols=106 Identities=18% Similarity=0.266 Sum_probs=61.4
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhccccCCCCcc
Q 006738 89 GKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLNELQTVEEMKRQ---CDEKRNVCEYMLMRQREKGRSKNGKGET 165 (633)
Q Consensus 89 g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLkeLk~VeemKkq---cDekr~~YE~m~~~~~EKgr~k~~K~e~ 165 (633)
..-||-+-|--+|+.+|+.. +-|=.|++|++|+| |||-|..|+|--....|=+|.+ |.--
T Consensus 87 dvryldihkhgreiarllek---------------iqkyfQ~IEtlK~ql~nf~e~RLiYDHYKlKvdELEK~~--KdSe 149 (294)
T 3caz_A 87 DVRYLDIHKHGREIARLLEK---------------IQKYRQEIEEIKKEYKETDKYRERYDHYKVKLDNLEKKN--KDQE 149 (294)
T ss_dssp HHHHHHHHHHCHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CCHH
T ss_pred chhhhhHHhhhHHHHHHHHH---------------HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHHhcc--chHH
Confidence 34466666677777777643 22334455666655 6888999887443233333211 3333
Q ss_pred ccH---HHHHHHHHhhHhhHhHHHHHHhhhc--cCCchhHHHHHH-HHHHHHHHH
Q 006738 166 FSL---QQLQEAHDEYDQEATLFVFRLKSLK--QGQSRSLLTQAA-RHHAAQLSF 214 (633)
Q Consensus 166 ~i~---eqle~~r~~fqEeaqmc~frLKsLK--qgq~rsLLtqaa-RhhaAQl~f 214 (633)
-|+ .-|+.+--.|+ +.|.-.|--+. -|.-..++-.|| --+..|+.|
T Consensus 150 KI~RNQsKLssAEtaYk---qvcsDiInkMnkll~n~~riineaasavwstqlqy 201 (294)
T 3caz_A 150 RIERNQQKFKDAEAAYS---SVCADLIQKMETVWKKHVSIFAEAASAVWSTQLQY 201 (294)
T ss_dssp HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHhhhHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 56788888898 88888876332 234445555544 345567766
No 40
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=55.50 E-value=62 Score=26.82 Aligned_cols=78 Identities=17% Similarity=0.187 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHH---HHHHHHhhhhccCCcH--HHHHHHHHHH-HHHH
Q 006738 63 YEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLV---DAYRSHIFQTITIPSE--SLLNELQTVE-EMKR 136 (633)
Q Consensus 63 yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~---d~yr~nI~~tIt~PsE--SLLkeLk~Ve-emKk 136 (633)
-+|.+|++.+-..|- + |+....+++.+|.+-..+...- +.|..-+-. .|-. .+.++|+.++ .+++
T Consensus 77 ~~~~~A~~~~~~al~----~--~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l---~p~~~~~~~~~l~~~~~~~~~ 147 (162)
T 3rkv_A 77 GDLHEAEETSSEVLK----R--EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN---HPAAASVVAREMKIVTERRAE 147 (162)
T ss_dssp TCHHHHHHHHHHHHH----H--STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHh----c--CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHH
Confidence 345666665554442 1 4556677777777766654432 222222211 3543 3455788777 4444
Q ss_pred HHHHHHHHHHHHH
Q 006738 137 QCDEKRNVCEYML 149 (633)
Q Consensus 137 qcDekr~~YE~m~ 149 (633)
+-++.++.|..|+
T Consensus 148 ~~~~~k~~~~~~f 160 (162)
T 3rkv_A 148 KKADSRVTYSKMF 160 (162)
T ss_dssp HTTSSCC------
T ss_pred HHHHHHHHHHHhc
Confidence 4444455566664
No 41
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=52.55 E-value=65 Score=35.89 Aligned_cols=40 Identities=10% Similarity=0.302 Sum_probs=26.3
Q ss_pred hhHHHHH-HHhHh----HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 006738 29 AQLDELA-QASQD----MQDMRGCYDSLLSAAAATANSAYEFSESLQEL 72 (633)
Q Consensus 29 a~ldEl~-~a~qd----m~~Mk~~ydsllsaaaa~~ns~yefsEaleem 72 (633)
+.|-.++ .+.+| |.+||+.|+.| + ..-.++|.|.+.+-++
T Consensus 49 CrLQglLdkqErDltkrINELKnqLEdl-s---KnsKdseqy~k~~~E~ 93 (562)
T 3ghg_A 49 CRMKGLIDEVNQDFTNRINKLKNSLFEY-Q---KNNKDSHSLTTNIMEI 93 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHH-H---HHHHHHHHHHHHHHHT
T ss_pred cchhhhHHhhcCcHHHHHHHHHHHHHHH-H---hhchhHHHHHHHHHHH
Confidence 4555555 55665 89999999999 2 3455666666665554
No 42
>3zrx_A AF1503 protein, osmolarity sensor protein ENVZ; signaling protein, osmoregulation, OMPR, OMPC; 1.25A {Archaeoglobus fulgidus} PDB: 3zrv_A 3zrw_A 3zrw_B 2lfs_A 2lfr_A 1joy_A 2l7i_A 2y20_A 2l7h_A 2y21_A 2y0t_A 2y0q_A
Probab=52.39 E-value=55 Score=25.19 Aligned_cols=65 Identities=15% Similarity=0.255 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhhhhhh-hcccC-CchhhhHHHHHHHhHHHHHHHHHHH---HHHHhhhhccCCcHHHHH
Q 006738 62 AYEFSESLQELGACLLE-KTALN-DNEESGKVLLMLGKVQFELQKLVDA---YRSHIFQTITIPSESLLN 126 (633)
Q Consensus 62 ~yefsEaleemGscll~-kta~~-dd~e~g~v~l~lgk~q~EL~kL~d~---yr~nI~~tIt~PsESLLk 126 (633)
...+.+++++++..=+. +.... ..+|+|.+.-.|-.+...|..++.. +..++.+-|..|+..+..
T Consensus 11 l~~l~~~~~~i~~gdl~~~~~~~~~~dEi~~l~~~~n~m~~~l~~~~~~~~~~~~~~shel~~~l~~i~~ 80 (115)
T 3zrx_A 11 IIELSNTFDKIAEGNLEAEVPHQNRADEIGILAKSIERLRRSLKQLADDRTLLMAGVSHDLRTPLTRIRL 80 (115)
T ss_dssp HHHHHHHHHHHHTTCTTCCCTTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 34455666666654332 22233 5678998888888888888877765 355566666666666654
No 43
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=52.15 E-value=1.6e+02 Score=27.93 Aligned_cols=38 Identities=18% Similarity=0.308 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHH------hhhHHHHHHHHHHHhhhhhh
Q 006738 41 MQDMRGCYDSLLSAAAAT------ANSAYEFSESLQELGACLLE 78 (633)
Q Consensus 41 m~~Mk~~ydsllsaaaa~------~ns~yefsEaleemGscll~ 78 (633)
+..|..+|+.|...+..- +-..+.|...++++-.-+-+
T Consensus 84 ~~~l~~~w~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e 127 (322)
T 1u4q_A 84 RETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKE 127 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777788877655431 22356677777776666533
No 44
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=52.11 E-value=58 Score=34.70 Aligned_cols=20 Identities=15% Similarity=0.209 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 006738 130 TVEEMKRQCDEKRNVCEYML 149 (633)
Q Consensus 130 ~VeemKkqcDekr~~YE~m~ 149 (633)
.+.+.-..|++++++-+.|.
T Consensus 380 ~~~~F~~~f~~A~~en~~~~ 399 (483)
T 2j1d_G 380 IFDQFLQAVSEAKQENENMR 399 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555555544
No 45
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=50.10 E-value=1.6e+02 Score=27.29 Aligned_cols=160 Identities=9% Similarity=0.083 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCC
Q 006738 41 MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIP 120 (633)
Q Consensus 41 m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~P 120 (633)
+.++-+..+..+.+--+..++.-.|.++|.++..+.. ...+..+.+.-.++.+..|+. +....+++..|..=
T Consensus 53 ~~~l~k~~~~y~~~~~~~~~~~~~l~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~~vi~Pl~~~ 124 (244)
T 1uru_A 53 ANRLQKEFNNYIRCVRAAQAASKTLMDSVCEIYEPQW-----SGYDALQAQTGASESLWADFA---HKLGDQVLIPLNTY 124 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTS-----TTHHHHHHHHHHHHHHHHHHH---HHHHTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-----CCchHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 4444444444444444555666779999999766543 112345544333444433433 34445555555544
Q ss_pred cHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhc--cccCCCCccccHHHHHHHHHhhHhhHhHHHHHHhhhcc
Q 006738 121 SESLLNELQTV----EEMKRQCDEKRNVCEYMLMRQREKG--RSKNGKGETFSLQQLQEAHDEYDQEATLFVFRLKSLKQ 194 (633)
Q Consensus 121 sESLLkeLk~V----eemKkqcDekr~~YE~m~~~~~EKg--r~k~~K~e~~i~eqle~~r~~fqEeaqmc~frLKsLKq 194 (633)
+ +.+++++.. +.-+--||..|..++.... +.+|. ..+..+.+. -.++.+..++.+.+++.--.-+|-.++.
T Consensus 125 ~-~~~~~i~~~ikKR~~k~lDyD~~~~~l~kl~~-k~~k~kd~~kl~~ae~-el~~ak~~ye~ln~~L~~eLp~l~~~~~ 201 (244)
T 1uru_A 125 T-GQFPEMKKKVEKRNRKLIDYDGQRHSFQNLQA-NANKRKDDVKLTKGRE-QLEEARRTYEILNTELHDELPALYDSRI 201 (244)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCBTTBCCTTTTCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccccCccHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 4 455544333 2445568888877776542 21122 334444432 2344444444433333333333444444
Q ss_pred CC----chhHHHHHHHHHHHHH
Q 006738 195 GQ----SRSLLTQAARHHAAQL 212 (633)
Q Consensus 195 gq----~rsLLtqaaRhhaAQl 212 (633)
.- +.+|+..-++||. |+
T Consensus 202 ~~~~~~l~~fv~~q~~~~~-~~ 222 (244)
T 1uru_A 202 LFLVTNLQTLFATEQVFHN-ET 222 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHHHHHHH-HH
Confidence 43 4444444445544 44
No 46
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=50.06 E-value=2.5e+02 Score=29.54 Aligned_cols=26 Identities=19% Similarity=0.277 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHH
Q 006738 44 MRGCYDSLLSAAAATANSAYEFSESL 69 (633)
Q Consensus 44 Mk~~ydsllsaaaa~~ns~yefsEal 69 (633)
++++|+.|+...-..++.-..|++.|
T Consensus 79 l~~aw~~~~~e~e~~a~~H~~~a~~L 104 (486)
T 3haj_A 79 VEKAWMAFMSEAERVSELHLEVKASL 104 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555544444444454444
No 47
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=49.42 E-value=2.3e+02 Score=29.69 Aligned_cols=37 Identities=27% Similarity=0.328 Sum_probs=13.6
Q ss_pred HHHHhhHhhHhHHHHHHhhhccCCchhHHHHHHHHHH
Q 006738 173 EAHDEYDQEATLFVFRLKSLKQGQSRSLLTQAARHHA 209 (633)
Q Consensus 173 ~~r~~fqEeaqmc~frLKsLKqgq~rsLLtqaaRhha 209 (633)
+...+-.+|.+--.=-||+|.++-.+-.=|.-+-|||
T Consensus 558 ~~~~~l~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 594 (597)
T 3oja_B 558 AKQAELRQETSLKRQKVKQLEAKKNRNPDTRRVSHHH 594 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTC------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccc
Confidence 3333444445555555667777766666666666665
No 48
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=47.32 E-value=1e+02 Score=30.68 Aligned_cols=22 Identities=23% Similarity=0.200 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 006738 128 LQTVEEMKRQCDEKRNVCEYML 149 (633)
Q Consensus 128 Lk~VeemKkqcDekr~~YE~m~ 149 (633)
++.++..|+.|+...++.+...
T Consensus 147 ~~~l~kaKk~Y~~~c~e~~~a~ 168 (320)
T 3m3w_A 147 LKEVEASKKSYHTARKDEKTAQ 168 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667788888777744443
No 49
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=46.26 E-value=1.9e+02 Score=27.04 Aligned_cols=142 Identities=13% Similarity=0.121 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHhhhhhhhcc--------cCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHH-HHHHHH
Q 006738 62 AYEFSESLQELGACLLEKTA--------LNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLN-ELQTVE 132 (633)
Q Consensus 62 ~yefsEaleemGscll~kta--------~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLk-eLk~Ve 132 (633)
+..|...++++-+.|-++-. .+|-..+-..+-+.-.|+.||...-+. ...|..+ -+.|+. .--..+
T Consensus 16 ~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~~~el~~~~~~-v~~l~~~----~~~L~~~~~~~~~ 90 (250)
T 1quu_A 16 AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDR-VEQIAAI----AQELNELDYHDAV 90 (250)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH----HHHHHHTTCTTHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH----HHHHHhccCcchh
Confidence 35666666666666544411 223334445566666777777663322 2233222 233332 111112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccHHHHHHHHHhhHhhHhHHHHHHh-------hhccCCchhHHHHHH
Q 006738 133 EMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFSLQQLQEAHDEYDQEATLFVFRLK-------SLKQGQSRSLLTQAA 205 (633)
Q Consensus 133 emKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~eqle~~r~~fqEeaqmc~frLK-------sLKqgq~rsLLtqaa 205 (633)
+++..|++-..-|+.... ..+.-+.+... .-..-++++..+.+|..++.-+.=-|. +..-|+..+=++.+.
T Consensus 91 ~I~~r~~~l~~~W~~L~~-~~~~R~~~L~~-~l~~~~~~d~l~~qF~~~a~~~~~Wl~~~e~~l~~~~~~~d~e~v~~ll 168 (250)
T 1quu_A 91 NVNDRCQKICDQWDRLGT-LTQKRREALER-MEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLI 168 (250)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCCCSTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccccCCHHHHHHHH
Confidence 333344443333333332 11111111110 001125566667788877766655553 434455555566666
Q ss_pred HHHHH
Q 006738 206 RHHAA 210 (633)
Q Consensus 206 RhhaA 210 (633)
+-|.+
T Consensus 169 ~~h~~ 173 (250)
T 1quu_A 169 TAHEQ 173 (250)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 50
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=45.50 E-value=89 Score=32.29 Aligned_cols=82 Identities=20% Similarity=0.136 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHHHH-HHHHHHHHHHH
Q 006738 61 SAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLNEL-QTVEEMKRQCD 139 (633)
Q Consensus 61 s~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLkeL-k~VeemKkqcD 139 (633)
+-..|...++.+|.+.. ..+ +.-...+.-.|..+..|++++.+.|.. ++..|.-++.. =+ +.++..|+-|+
T Consensus 73 aW~~ll~ete~~a~~H~-~la---e~L~~~v~~~l~~~~ke~~~~rK~~~~-~~~klqk~~~k---~~~~~lekaKk~Y~ 144 (406)
T 4dyl_A 73 SWAEITSQTEGLSRLLR-QHA---EDLNSGPLSKLSLLIRERQQLRKTYSE-QWQQLQQELTK---THSQDIEKLKSQYR 144 (406)
T ss_dssp HHHHHHHHHHHHHHHHH-HHH---HHHHHTHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH---HHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 34455555566665553 222 233334556677788888888888754 33343333333 33 45566788888
Q ss_pred HHHHHHHHHHH
Q 006738 140 EKRNVCEYMLM 150 (633)
Q Consensus 140 ekr~~YE~m~~ 150 (633)
...+++|....
T Consensus 145 ~~cke~e~A~~ 155 (406)
T 4dyl_A 145 ALARDSAQAKR 155 (406)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888777553
No 51
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=44.03 E-value=42 Score=34.71 Aligned_cols=72 Identities=24% Similarity=0.384 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhh-----
Q 006738 41 MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQ----- 115 (633)
Q Consensus 41 m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~----- 115 (633)
|.++..+|+.|..... .......|...|+.| |+ .++|...+.- .-+|+|..+++|.-
T Consensus 248 ~~d~~~~~~~l~~~~~-~t~~~~~flSiLQhL---Ll----i~~d~~~~~~----------~~~Lid~~v~qivl~~~~~ 309 (386)
T 2bnx_A 248 MDDFGEVFQIILNTVK-DSKAEPHFLSILQHL---LL----VRNDYEARPQ----------YYKLIEECVSQIVLHKNGT 309 (386)
T ss_dssp CCCHHHHHHHHHHHHT-TSTHHHHHHHHHHHH---TT----SCCCTTTHHH----------HHHHHHHHHHHHHTCGGGC
T ss_pred CCCHHHHHHHHHHHHc-CCCchhHHHHHHHHH---Hh----CCCcchhHHH----------HHHHHHHHHHHHHhccCCC
Confidence 3455667777765543 344566688888876 54 3444433332 33679999999883
Q ss_pred -------hccCCcHHHHHHHHH
Q 006738 116 -------TITIPSESLLNELQT 130 (633)
Q Consensus 116 -------tIt~PsESLLkeLk~ 130 (633)
-+.+..+.|+..|.+
T Consensus 310 Dpd~~~~~l~~~v~~l~d~l~~ 331 (386)
T 2bnx_A 310 DPDFKCRHLQIDIERLVDQMID 331 (386)
T ss_dssp CCCTTCSCCCCCCTTTC-----
T ss_pred CCCcccccccchHHHHHHHHhh
Confidence 456777778776655
No 52
>4ido_A Atlastin-1; GTPase, GTP/GDP binding, hydrolase; HET: GDP; 2.09A {Homo sapiens} PDB: 4idn_A* 3q5d_A* 3q5e_A* 4idq_A* 4idp_A* 3qnu_A* 3qof_A*
Probab=42.69 E-value=1.1e+02 Score=32.87 Aligned_cols=109 Identities=18% Similarity=0.199 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHhhhhhhhc-----ccCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHHHHHHH
Q 006738 62 AYEFSESLQELGACLLEKT-----ALNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLNELQTVEEMKR 136 (633)
Q Consensus 62 ~yefsEaleemGscll~kt-----a~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLkeLk~VeemKk 136 (633)
..+|.+.|.++-.+++... .++...-.|..|. .|++.|+..|+.--.-=.++++.-+-..+ =..
T Consensus 290 ~peF~~ql~~l~~~I~~~~~l~~K~i~G~~vtg~~L~----------~lv~~Yv~ain~g~vP~~esa~~a~ae~e-n~~ 358 (457)
T 4ido_A 290 DDEFIKNLKILIPWLLSPESLDIKEINGNKITCRGLV----------EYFKAYIKIYQGEELPHPKSMLQATAEAN-NLA 358 (457)
T ss_dssp CHHHHHHHHHHHHHHHSTTTCCCCEETTEECBHHHHH----------HHHHHHHHHHHSSSSCCCCCHHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHHhccccccccccCCEeecHHHHH----------HHHHHHHHHhcCCCCCCHHHHHHHHHHHH-HHH
Confidence 4689999999999998531 1334444555444 44788998888654434677775443333 335
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCCCCccccHHHHHHHHHhhHhhHhHHHHH
Q 006738 137 QCDEKRNVCEYMLMRQREKGRSKNGKGETFSLQQLQEAHDEYDQEATLFVFR 188 (633)
Q Consensus 137 qcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~eqle~~r~~fqEeaqmc~fr 188 (633)
-.+++.+.|+....++. .++--.+..+||+..++...++| +-.|+
T Consensus 359 Av~~A~~~Y~~~M~~~~------~~~~P~~~~~eL~~~H~~~~~~A-l~~F~ 403 (457)
T 4ido_A 359 AVATAKDTYNKKMEEIC------GGDKPFLAPNDLQTKHLQLKEES-VKLFR 403 (457)
T ss_dssp HHHHHHHHHHHHHHHHH------STTSCCCCHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHh------CCCCCCCCHHHHHHHHHHHHHHH-HHHHH
Confidence 67788888988875221 12234567899999999998665 45555
No 53
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=41.88 E-value=2.2e+02 Score=26.55 Aligned_cols=110 Identities=6% Similarity=-0.040 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCc-----cccH---HHHHHHHHhhHhhHhHHHHHHhhhccCC
Q 006738 125 LNELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGE-----TFSL---QQLQEAHDEYDQEATLFVFRLKSLKQGQ 196 (633)
Q Consensus 125 LkeLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e-----~~i~---eqle~~r~~fqEeaqmc~frLKsLKqgq 196 (633)
+..|..+---..+|+++...|+..+....+-+. ...... +++. .+.+++...|++-+ +. -....-+
T Consensus 158 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~----p~~~~~~ 231 (307)
T 2ifu_A 158 IGKASRLLVRQQKFDEAAASLQKEKSMYKEMEN-YPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SI----PGFSGSE 231 (307)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TS----TTSTTSH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC-hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CC----CCCCCCH
Confidence 334555555556788888888877642222111 000000 0010 23455555555221 10 0111111
Q ss_pred chhHHHHHHHHHHH-HHHHHHHH--hhhhhccchHHHHHHhhhhccc
Q 006738 197 SRSLLTQAARHHAA-QLSFVKKA--LKSLEAVDPHVKMVAEQQHIDY 240 (633)
Q Consensus 197 ~rsLLtqaaRhhaA-Ql~fF~~G--LKsLE~lephVk~lae~~hiDy 240 (633)
-..+|..+++.|.. ...-|++. +..+..++|-+..++.++.+-.
T Consensus 232 e~~~l~~l~~~~~~~d~~~~~~~~~~~~~~~ld~~~~~~~~~l~~~~ 278 (307)
T 2ifu_A 232 DCAALEDLLQAYDEQDEEQLLRVCRSPLVTYMDNDYAKLAISLKVPG 278 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTTSHHHHTSCHHHHHHHHTCCCC-
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHhCchhhhhhHHHHHHHHhCCCCC
Confidence 12345555555532 12233331 3445668899999999988765
No 54
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=40.43 E-value=2.2e+02 Score=27.38 Aligned_cols=64 Identities=13% Similarity=0.238 Sum_probs=38.5
Q ss_pred chhhhHHHHHHHhHHHHHHHH---HHHHHHHhhhhccCCc-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 006738 85 NEESGKVLLMLGKVQFELQKL---VDAYRSHIFQTITIPS-ESLLNELQTVEEMKRQCDEK-RNVCEYMLMR 151 (633)
Q Consensus 85 d~e~g~v~l~lgk~q~EL~kL---~d~yr~nI~~tIt~Ps-ESLLkeLk~VeemKkqcDek-r~~YE~m~~~ 151 (633)
+++...+++.+|.+..++..+ +..|..-+-. .|- ...+..|..+....++++++ ++.|..|+..
T Consensus 226 ~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l---~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 226 DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQL---YPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667788888776665332 3333332221 232 23455788888666667766 7789999864
No 55
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=40.33 E-value=2.3e+02 Score=27.30 Aligned_cols=24 Identities=4% Similarity=0.105 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 006738 130 TVEEMKRQCDEKRNVCEYMLMRQRE 154 (633)
Q Consensus 130 ~VeemKkqcDekr~~YE~m~~~~~E 154 (633)
.|.+.-++|-++|+.|+ ++..+.|
T Consensus 159 dv~~Fl~~y~~~R~~yH-~RreK~~ 182 (192)
T 2p22_C 159 DLDQFIKNYLDIRTQYH-LRREKLA 182 (192)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 67799999999999994 4432444
No 56
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=39.73 E-value=1.5e+02 Score=28.82 Aligned_cols=123 Identities=14% Similarity=0.101 Sum_probs=64.2
Q ss_pred chhhHHHHHHHhHh-HHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHH
Q 006738 27 PLAQLDELAQASQD-MQDMRGCYD-SLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQK 104 (633)
Q Consensus 27 p~a~ldEl~~a~qd-m~~Mk~~yd-sllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~k 104 (633)
|...+|...+++.| |..+++.-+ .+-.. +-++-=++++..+- ...-+-....+.+.-+|+...-|+..
T Consensus 4 ~~~~~e~v~~~~~~Y~~q~~~sa~~~~~~~---------~~s~l~~ql~~~~~-d~~~~l~~~~~~l~~~l~p~~ee~~~ 73 (243)
T 2a01_A 4 PQSPWDRVKDLATVYVDVLKDSGRDYVSQF---------EGSALGKQLNLKLL-DNWDSVTSTFSKLREQLGPVTQEFWD 73 (243)
T ss_dssp CCCSSCHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHCSSCCSSS-SSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcHHHHHHHHHHHHHHHHHhHHHHHHHH---------HHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 56667788888888 777776633 11110 00111122222111 00000123344455566666666666
Q ss_pred HHHHHHHHhhhhccCCcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 006738 105 LVDAYRSHIFQTITIPSESLLNELQTV-EEMKRQCDEKRNVCEYMLMRQREKGRSK 159 (633)
Q Consensus 105 L~d~yr~nI~~tIt~PsESLLkeLk~V-eemKkqcDekr~~YE~m~~~~~EKgr~k 159 (633)
-+-.|..-+-.-|.-=+|.+=+.|.-. ++++....+.-+.|..++.-+.|+-|.+
T Consensus 74 ~l~~~~~~lr~~l~kd~ee~r~~l~Py~~el~~~~~~~~eelr~~L~P~~eel~~~ 129 (243)
T 2a01_A 74 NLEKETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEMELYRQKVEPLRAELQEG 129 (243)
T ss_dssp HHHHHHHHHHHTSSCCSSCSSTTHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 666665555556666555555544433 3677777777777777666666666544
No 57
>3zcc_A HAMP, osmolarity sensor protein ENVZ; signaling protein, signal transduction, membrane protein, signalling, chimera; 1.25A {Archaeoglobus fulgidus} PDB: 3zrw_A 3zrv_A 3zrx_A 3zrw_B 2lfr_A 2lfs_A 1joy_A 2l7h_A 2l7i_A 2y20_A 2y21_A 2y0q_A 2y0t_A
Probab=39.36 E-value=1.2e+02 Score=23.40 Aligned_cols=65 Identities=15% Similarity=0.243 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhhhhhhh-cccCC-chhhhHHHHHHHhHHHHHHHHHHH---HHHHhhhhccCCcHHHHH
Q 006738 62 AYEFSESLQELGACLLEK-TALND-NEESGKVLLMLGKVQFELQKLVDA---YRSHIFQTITIPSESLLN 126 (633)
Q Consensus 62 ~yefsEaleemGscll~k-ta~~d-d~e~g~v~l~lgk~q~EL~kL~d~---yr~nI~~tIt~PsESLLk 126 (633)
......++++++..=+.. ..... .+|+|...-.|-.+...|..++.. +..+|.+-|.+|+..+..
T Consensus 11 l~~l~~~~~~i~~g~~~~~~~~~~~~dEi~~l~~~~n~m~~~l~~~~~~~~~~~~~~shel~tpl~~i~~ 80 (114)
T 3zcc_A 11 IIELSNTADKIAEGNLEAEVPHQNRADEIGILAKSIERLRRSLKQLADDGTLLMAGVSHDLRTPLTRIRL 80 (114)
T ss_dssp HHHHHHHHHHHHTTCTTCCCTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHcChHHHHHH
Confidence 345556666666553332 22233 678887777777777777666654 566677777777776654
No 58
>2b1e_A Exocyst complex component EXO70; tethering complex, endocytosis/exocytosis complex; 2.00A {Saccharomyces cerevisiae} PDB: 2b7m_A 2pfv_A
Probab=36.04 E-value=4.5e+02 Score=28.47 Aligned_cols=165 Identities=13% Similarity=0.082 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhhhhhh--hcccCCch------hhhHHHHHHHhHHHHHHHHHHHHHHH-------
Q 006738 48 YDSLLSAAAATANSAYEFSESLQELGACLLE--KTALNDNE------ESGKVLLMLGKVQFELQKLVDAYRSH------- 112 (633)
Q Consensus 48 ydsllsaaaa~~ns~yefsEaleemGscll~--kta~~dd~------e~g~v~l~lgk~q~EL~kL~d~yr~n------- 112 (633)
++.++..|-.. .+..+|.+||.++-..+-. ++-++..+ .+..+=-.+-.....|+..|+++..+
T Consensus 25 ~e~iI~~Gp~~-~~l~~Yl~al~rl~~al~~~~~~n~~s~e~~~f~g~l~~~~~L~~~g~~~L~~~F~~lL~~s~p~~p~ 103 (564)
T 2b1e_A 25 YEIILQKGINQ-VGLKQYTQVVHKLDDMLEDIQSGQANREENSEFHGILTHLEQLIKRSEAQLRVYFISILNSIKPFDPQ 103 (564)
T ss_dssp HHHHHHTCHHH-HCHHHHHHHHHHHHHHHHHHHC----CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCHH
T ss_pred HHHHHhcCCcc-ccHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 55566666554 5889999999999876532 22222111 13333233333444666666666554
Q ss_pred --hhhhccCCc--HHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHH---hhccccC-----CCCccccHHH
Q 006738 113 --IFQTITIPS--ESLLNELQTVE----------EMKRQCDEKRNVCEYMLMRQR---EKGRSKN-----GKGETFSLQQ 170 (633)
Q Consensus 113 --I~~tIt~Ps--ESLLkeLk~Ve----------emKkqcDekr~~YE~m~~~~~---EKgr~k~-----~K~e~~i~eq 170 (633)
|..-+.||. ++.|.||+.+- ++-+-|-+.|..|=..-.+.. +|..++. -|++..+..=
T Consensus 104 ~~i~k~~p~p~l~~~~l~~L~~Ia~~m~~~g~~~~~~~iY~~~R~~~l~~sL~~L~~~~k~~~~~~~~~~e~~~~~i~~~ 183 (564)
T 2b1e_A 104 INITKKMPFPYYEDQQLGALSWILDYFHGNSEGSIIQDILVGERSKLILKCMAFLEPFAKEISTAKNAPYEKGSSGMNSY 183 (564)
T ss_dssp HHHHHTCCCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTTTSTTCC------------CCSTHHHH
T ss_pred HhhccCCCCCCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhhccccccccCCchhhhccHHHHH
Confidence 222233443 56667777665 233344444444321111111 1111111 1233334445
Q ss_pred HHHHHHhhHhhHhHHHHHHhh---hccCCchhHHHHHHHHHHHHHH
Q 006738 171 LQEAHDEYDQEATLFVFRLKS---LKQGQSRSLLTQAARHHAAQLS 213 (633)
Q Consensus 171 le~~r~~fqEeaqmc~frLKs---LKqgq~rsLLtqaaRhhaAQl~ 213 (633)
+++-...|+.|-+||.-.+-. .+..-+..+++.++..+..-+.
T Consensus 184 ~~a~~~l~~~E~~L~~~vf~~~~~~~~~~f~~i~~~~l~~~~~~l~ 229 (564)
T 2b1e_A 184 TEALLGFIANEKSLVDDLYSQYTESKPHVLSQILSPLISAYAKLFG 229 (564)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 566688899999999777653 3443444455544444433444
No 59
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=35.58 E-value=1.1e+02 Score=26.91 Aligned_cols=50 Identities=20% Similarity=0.198 Sum_probs=32.2
Q ss_pred hHHHHHHHhHh-HHHHHHHHHHHHHHHHHHhh------hHHHHHHHHHHHhhhhhhh
Q 006738 30 QLDELAQASQD-MQDMRGCYDSLLSAAAATAN------SAYEFSESLQELGACLLEK 79 (633)
Q Consensus 30 ~ldEl~~a~qd-m~~Mk~~ydsllsaaaa~~n------s~yefsEaleemGscll~k 79 (633)
+|-|.++..++ +..|..+|+.|...++..-. -.+.|...++++-.-+-++
T Consensus 9 ~~~~~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~l~~F~~d~~el~~Wi~ek 65 (149)
T 3f31_A 9 KVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEK 65 (149)
T ss_dssp ----CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555566 88888999998888766322 3566777777777766665
No 60
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=34.57 E-value=3.3e+02 Score=26.38 Aligned_cols=22 Identities=18% Similarity=0.200 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 006738 128 LQTVEEMKRQCDEKRNVCEYML 149 (633)
Q Consensus 128 Lk~VeemKkqcDekr~~YE~m~ 149 (633)
++.|+..|+.|+.+.+++|...
T Consensus 156 ~~~l~KaK~~Y~~~c~e~e~a~ 177 (312)
T 3abh_A 156 LKEVEAAKKAHHAACKEEKLAI 177 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788889998888887654
No 61
>2p7n_A Pathogenicity island 1 effector protein; CVR69, structural genomics, PSI-2, protein structure initiative; 2.80A {Chromobacterium violaceum}
Probab=34.55 E-value=80 Score=33.99 Aligned_cols=87 Identities=16% Similarity=0.240 Sum_probs=54.3
Q ss_pred HHHHHHHhHh-HHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHH
Q 006738 31 LDELAQASQD-MQDMRGCYDSLLSAAA-ATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDA 108 (633)
Q Consensus 31 ldEl~~a~qd-m~~Mk~~ydsllsaaa-a~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~ 108 (633)
..||.....+ |..+++.|=-.+.-.. .++.=-.+|.++|.+|+.++- + ..|-++|=+..-++...|.++++.
T Consensus 178 ~aeLw~~Isd~I~nIksdYldvYa~IvK~YTdyyQdfNeaLSklSdyIs---A---GkDGNkIkFd~~sfk~al~kl~~K 251 (407)
T 2p7n_A 178 DSDLWDMISDQIGKIKDNYLGVYENVVGQYTDFYKAFSDILSQMANWIK---P---GGDGNKVKLNVDALKAALEKLKKD 251 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHGGGCC---------------CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---c---CCCCCeeeecHHHHHHHHHHHHHh
Confidence 4677766666 8888766554443322 245556789999999977774 1 123347788888999999999999
Q ss_pred HHHH---h-hhhccCCcHH
Q 006738 109 YRSH---I-FQTITIPSES 123 (633)
Q Consensus 109 yr~n---I-~~tIt~PsES 123 (633)
|-.+ + -+.|.||.++
T Consensus 252 Ys~~~~~~~~~~~lfp~~~ 270 (407)
T 2p7n_A 252 FSLGDNLDNKKAVLFPAQS 270 (407)
T ss_dssp TSCCTTSCCSTTEEESCCC
T ss_pred hcccccccCCccccccccc
Confidence 9332 2 3456677653
No 62
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=33.86 E-value=2.7e+02 Score=26.07 Aligned_cols=24 Identities=8% Similarity=-0.079 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 006738 127 ELQTVEEMKRQCDEKRNVCEYMLM 150 (633)
Q Consensus 127 eLk~VeemKkqcDekr~~YE~m~~ 150 (633)
.|-.+--....+++..+.|+..+.
T Consensus 228 ~la~~~~~~g~~~~A~~~~~~al~ 251 (411)
T 4a1s_A 228 NLGNTYYLLGDFQAAIEHHQERLR 251 (411)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHH
Confidence 444444455566677666666554
No 63
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=33.42 E-value=2.6e+02 Score=24.87 Aligned_cols=18 Identities=11% Similarity=0.019 Sum_probs=9.5
Q ss_pred hhHHHHHHHhHHHHHHHH
Q 006738 88 SGKVLLMLGKVQFELQKL 105 (633)
Q Consensus 88 ~g~v~l~lgk~q~EL~kL 105 (633)
+-..+-+...|+.||...
T Consensus 35 v~~ll~kh~~~~~ei~~~ 52 (213)
T 1cun_A 35 VQNLRKKHKRLEAELAAH 52 (213)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 334444555566666654
No 64
>3nzz_A Cell invasion protein SIPD; needle TIP protein, PRGI, SIPB, SIPC; 1.65A {Salmonella enterica} PDB: 3o02_A* 3o00_A 3o01_A* 2ym0_A
Probab=32.14 E-value=16 Score=37.90 Aligned_cols=86 Identities=22% Similarity=0.325 Sum_probs=57.9
Q ss_pred HHHHHHhHh-HHHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHH
Q 006738 32 DELAQASQD-MQDMRGCYDSLLSAA-AATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAY 109 (633)
Q Consensus 32 dEl~~a~qd-m~~Mk~~ydsllsaa-aa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~y 109 (633)
.|+-+...+ +..+++.|=-.++-. ..++.=-.+|.++|.+|+.++- +..| -.+|=+....+...|.++++.|
T Consensus 97 aElw~~I~~~I~~Ik~dYldvYa~IVk~YTdyyQdfN~aLSklS~~Is---aGkD---GN~IKFd~~sfkkaL~~li~KY 170 (308)
T 3nzz_A 97 AEIWDMVSQNISAIGDSYLGVYENVVAVYTDFYQAFSDILSKMGGWLL---PGKD---GNTVKLDVTSLKNDLNSLVNKY 170 (308)
T ss_dssp -HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTGGGGEE---ECSS---TTEEEECHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCCC---CCeeeecHHHHHHHHHHHHHhc
Confidence 466655555 888887665544322 2345566789999999998663 2222 2246677888999999999999
Q ss_pred HHHhhhhccCCcHH
Q 006738 110 RSHIFQTITIPSES 123 (633)
Q Consensus 110 r~nI~~tIt~PsES 123 (633)
-..=-+.+.+|.++
T Consensus 171 ~~~~~~~~l~Pa~~ 184 (308)
T 3nzz_A 171 NQINSNTVLFPAQS 184 (308)
T ss_dssp TSCSTTTEEESCCC
T ss_pred cCCCccccccccCC
Confidence 75445677888765
No 65
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=30.61 E-value=4.2e+02 Score=26.48 Aligned_cols=10 Identities=30% Similarity=0.597 Sum_probs=7.4
Q ss_pred HHHHHhhhhh
Q 006738 68 SLQELGACLL 77 (633)
Q Consensus 68 aleemGscll 77 (633)
+-.++|.+|.
T Consensus 74 ~s~elG~~L~ 83 (253)
T 2d1l_A 74 GTREIGSALT 83 (253)
T ss_dssp HHHHHHHHHH
T ss_pred chHHHHHHHH
Confidence 5678888885
No 66
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=30.33 E-value=2.3e+02 Score=33.27 Aligned_cols=68 Identities=9% Similarity=0.035 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCCCCccccH-HHHHHHHHhhHhhHhHHHHHHhhhcc-------CCchhHHHHHHHHH
Q 006738 137 QCDEKRNVCEYMLMRQREKGRSKNGKGETFSL-QQLQEAHDEYDQEATLFVFRLKSLKQ-------GQSRSLLTQAARHH 208 (633)
Q Consensus 137 qcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~-eqle~~r~~fqEeaqmc~frLKsLKq-------gq~rsLLtqaaRhh 208 (633)
..+++|...+.... +|.+.= .+.+.| |.|+.....|+.++..|+-.|.+..+ |+-..=++.+++-|
T Consensus 855 dL~~~W~~Le~ae~-----eRe~~L-~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s~d~g~dL~~Vqal~KKh 928 (1010)
T 1g8x_A 855 EIDSTWSALEKAEQ-----EHAEAL-RIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNL 928 (1010)
T ss_dssp HHHHHHHHHHHHHH-----HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSCCSCCSTTTTGGGTTSH
T ss_pred HHHHHHHHHHHHHH-----HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHH
Confidence 45677777665433 222111 111122 45666778899999999988875322 33233355565666
Q ss_pred HH
Q 006738 209 AA 210 (633)
Q Consensus 209 aA 210 (633)
.|
T Consensus 929 ea 930 (1010)
T 1g8x_A 929 EA 930 (1010)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 67
>3u8p_A Cytochrome B562 integral fusion with enhanced GRE fluorescent protein; directed evolution, domain insertion, energy transfer, fluor quenching; HET: CRO HEM; 2.75A {Aequorea victoria}
Probab=30.32 E-value=2e+02 Score=30.49 Aligned_cols=105 Identities=17% Similarity=0.236 Sum_probs=67.0
Q ss_pred chhhHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhh-cc----cC-CchhhhHHHHHHHhHHH
Q 006738 27 PLAQLDELAQASQDMQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEK-TA----LN-DNEESGKVLLMLGKVQF 100 (633)
Q Consensus 27 p~a~ldEl~~a~qdm~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~k-ta----~~-dd~e~g~v~l~lgk~q~ 100 (633)
-.+.++-.++...+|..|-.-|+.++- +.|+.+|-++|+.|-..++.- .+ +. ..+|+.. +--+|.
T Consensus 36 g~~~~~~~ad~~~~M~~~a~n~~~~~k-----a~s~~~~~~~l~~mr~aa~daqk~~p~kl~~k~~ds~E----~kd~~~ 106 (347)
T 3u8p_A 36 GDATFGGSADLEDNMETLNDNLKVIEK-----ADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPE----MKDFRH 106 (347)
T ss_dssp ECCCCCCCHHHHHHHHHHHHHHHHHHH-----CCSHHHHHHHHHHHHHHHHHHTTSCCGGGTTSCTTSHH----HHHHHH
T ss_pred cchhhccccchhHHHHHHHHHhhhhhc-----cchHHHHHHHHHHHHHHHHHhhcCCCccccccCCCchH----HHHHHH
Confidence 334445556777889999988888775 458899999999998877632 11 11 1122211 223444
Q ss_pred HHHHHHHHHHHHhhhhccCCcHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Q 006738 101 ELQKLVDAYRSHIFQTITIPSESLLN--ELQTVEEMKRQCDEKRNVCEYML 149 (633)
Q Consensus 101 EL~kL~d~yr~nI~~tIt~PsESLLk--eLk~VeemKkqcDekr~~YE~m~ 149 (633)
=|+-|++..-+. .-|++ +|.+-+..-+.|++-|+.|+.+.
T Consensus 107 Gl~~li~qiD~a---------~~la~~g~l~eAkk~a~~~~~~r~~yHk~~ 148 (347)
T 3u8p_A 107 GFDILVGQIDDA---------LKLANEGKVKEAQAAAEQLKTTRNAYHQKY 148 (347)
T ss_dssp HHHHHHHHHHHH---------HHHHHTTCHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHH---------HHhhhccchHHHHHHHHHhHhHHHhhhhhc
Confidence 444444443332 34566 67777777778999999999877
No 68
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=30.09 E-value=2.2e+02 Score=23.14 Aligned_cols=16 Identities=13% Similarity=0.038 Sum_probs=8.8
Q ss_pred hhhhHHHHHHHhHHHH
Q 006738 86 EESGKVLLMLGKVQFE 101 (633)
Q Consensus 86 ~e~g~v~l~lgk~q~E 101 (633)
...+.++..+|.+...
T Consensus 80 ~~~a~~~~~lg~~~~~ 95 (127)
T 4gcn_A 80 KLIAKAMSRAGNAFQK 95 (127)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445666666665443
No 69
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=30.08 E-value=3.2e+02 Score=24.87 Aligned_cols=86 Identities=15% Similarity=0.094 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHHhhhhhhhcc-------cCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHH----HHH
Q 006738 61 SAYEFSESLQELGACLLEKTA-------LNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLN----ELQ 129 (633)
Q Consensus 61 s~yefsEaleemGscll~kta-------~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLk----eLk 129 (633)
+.|.|...++++-.-+-++.. .+|=+++-..+-+|-.|+.||..+...-+..|+.. .+.|+. +-.
T Consensus 2 ~L~~f~~~~~~l~~Wl~~ke~~l~~~~~g~dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~----~~~L~~~~~~~~~ 77 (218)
T 3edu_A 2 SLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAF----IERLIDAGHSEAA 77 (218)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHTTCTTHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHcccccCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH----HHHHHHcCCCCHH
Confidence 567777777777666655421 12334555666677788888876544444555444 344444 345
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 006738 130 TVEEMKRQCDEKRNVCEYMLM 150 (633)
Q Consensus 130 ~VeemKkqcDekr~~YE~m~~ 150 (633)
.|.++.......|+....+..
T Consensus 78 ~i~~~~~~l~~~W~~L~~~~~ 98 (218)
T 3edu_A 78 TIAEWKDGLNEMWADLLELID 98 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 667777777788888877765
No 70
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=30.07 E-value=4.4e+02 Score=26.55 Aligned_cols=195 Identities=16% Similarity=0.156 Sum_probs=88.1
Q ss_pred HhHhHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHhhhhhhh-ccc-------CCchhhhHHHHHHHhHHHHHHH
Q 006738 37 ASQDMQDMRGCYDSLLSAAAATA----NSAYEFSESLQELGACLLEK-TAL-------NDNEESGKVLLMLGKVQFELQK 104 (633)
Q Consensus 37 a~qdm~~Mk~~ydsllsaaaa~~----ns~yefsEaleemGscll~k-ta~-------~dd~e~g~v~l~lgk~q~EL~k 104 (633)
+-..|...-.+|+.++..+...- ..+..|-..++++-+-|-++ ..+ +|-..+-..+-+...|+.||..
T Consensus 104 ~w~~L~~l~~~r~~~l~~~~~R~~~Le~~~~~f~~~~~~~~~Wl~e~e~~l~~~~~~g~dl~~v~~ll~kh~~~~~~l~~ 183 (476)
T 1hci_A 104 AWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAA 183 (476)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHCCGGGSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33346667777777776554321 22677777777777766544 112 1222333344455666666665
Q ss_pred HHHHHHHHhhhhccCCcHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccHHHHHHHHHhhHhhHh
Q 006738 105 LVDAYRSHIFQTITIPSESLLNE-LQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFSLQQLQEAHDEYDQEAT 183 (633)
Q Consensus 105 L~d~yr~nI~~tIt~PsESLLke-Lk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~eqle~~r~~fqEeaq 183 (633)
.-+.+ ..|+.. .+.|+.+ --...++...|++-..-|+.... ..+.-+.+...... .-+.++..+.+|..++.
T Consensus 184 ~~~~v-~~l~~~----~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~-~~~~R~~~L~~~~~-~~~~~e~l~~~f~~~a~ 256 (476)
T 1hci_A 184 HQDRV-EQIAAI----AQELNELDYHDAVNVNDRCQKICDQWDRLGT-LTQKRREALERMEK-LLETIDQLHLEFAKRAA 256 (476)
T ss_dssp HHHHH-HHHHHH----HHHHHHTTCTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred hHHHH-HHHHHH----HHHHHhCcCcchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 33322 223222 3333331 01122344444444334443332 11111111111100 11344444556665544
Q ss_pred HHH-------HHHhhhccCCchhHHHHHHHHHHH---HHHHHHHHhhhhhccchHHHHHHhhhhc
Q 006738 184 LFV-------FRLKSLKQGQSRSLLTQAARHHAA---QLSFVKKALKSLEAVDPHVKMVAEQQHI 238 (633)
Q Consensus 184 mc~-------frLKsLKqgq~rsLLtqaaRhhaA---Ql~fF~~GLKsLE~lephVk~lae~~hi 238 (633)
-+. ..|.+..-|+..+-++.+.+-|.+ .+.=|...+..+..+...+..+.+..|+
T Consensus 257 ~~~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~ 321 (476)
T 1hci_A 257 PFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNI 321 (476)
T ss_dssp HHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 332 334454455555556666665554 2234444444444444445555554443
No 71
>2pih_A Protein YMCA; regulate community development, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.281.1.1
Probab=29.46 E-value=2.3e+02 Score=25.78 Aligned_cols=21 Identities=14% Similarity=0.088 Sum_probs=14.3
Q ss_pred HHHHHHHhhhhccCCcHHHHH
Q 006738 106 VDAYRSHIFQTITIPSESLLN 126 (633)
Q Consensus 106 ~d~yr~nI~~tIt~PsESLLk 126 (633)
|..+.+-|+.||+.|+..+++
T Consensus 98 l~~LL~~I~~iI~~~I~~~i~ 118 (151)
T 2pih_A 98 VNDLLQLVAHTISNQVTNEII 118 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccc
Confidence 444556677888877777665
No 72
>3f0c_A TETR-molecule A, transcriptional regulator; MCSG,PSI, SAD, structural genomics, protein structure initiative; 2.96A {Cytophaga hutchinsonii}
Probab=29.10 E-value=2.7e+02 Score=23.83 Aligned_cols=25 Identities=8% Similarity=0.101 Sum_probs=18.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhh
Q 006738 197 SRSLLTQAARHHAAQLSFVKKALKS 221 (633)
Q Consensus 197 ~rsLLtqaaRhhaAQl~fF~~GLKs 221 (633)
..+-+..++++...-..+|-.||+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~l~gl~~ 205 (216)
T 3f0c_A 181 DESDYEDLDKNMCKVAGMFLKEIQT 205 (216)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4566777777777778888888865
No 73
>2pjw_H Uncharacterized protein YHL002W; GAT domain, core complex, doamin SWAP, endocytosis/exocytosis complex; 3.01A {Saccharomyces cerevisiae}
Probab=28.59 E-value=1.9e+02 Score=25.04 Aligned_cols=52 Identities=4% Similarity=0.131 Sum_probs=45.3
Q ss_pred CchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006738 84 DNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLNELQTVEEMKRQCDEKRNVCEYMLM 150 (633)
Q Consensus 84 dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLkeLk~VeemKkqcDekr~~YE~m~~ 150 (633)
||+++...|-...-..=-|.+|++.|.+--- +..+|-.+|-.+++.|+.|+.
T Consensus 33 ~d~eiq~LY~~v~~lRPkL~~li~kysqKk~---------------eL~~Ln~kl~~a~~~Yd~lle 84 (88)
T 2pjw_H 33 QDPHIGDMYGSVTPLRPQVTRMLGKYAKEKE---------------DMLSLRQVLANAERSYNQLMD 84 (88)
T ss_dssp SCHHHHHHHHHHTTHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhhhhHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999987532 345899999999999999985
No 74
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=28.07 E-value=1.2e+02 Score=31.66 Aligned_cols=16 Identities=6% Similarity=0.158 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 006738 131 VEEMKRQCDEKRNVCE 146 (633)
Q Consensus 131 VeemKkqcDekr~~YE 146 (633)
+..+++..|++|+.|+
T Consensus 479 l~~~~~~i~~~~~~~~ 494 (597)
T 3oja_B 479 LQGLHAEIDTNLRRYR 494 (597)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhhhhhhcC
Confidence 3345555555555555
No 75
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=27.59 E-value=3.4e+02 Score=25.21 Aligned_cols=88 Identities=16% Similarity=0.126 Sum_probs=48.7
Q ss_pred cccchhhHHHHHHHhHh-HHHHHHH-HHHH---HHHHHH-HhhhHHHHHHHHHHHhhh---hhhhcccCCchhhhHHHHH
Q 006738 24 DLRPLAQLDELAQASQD-MQDMRGC-YDSL---LSAAAA-TANSAYEFSESLQELGAC---LLEKTALNDNEESGKVLLM 94 (633)
Q Consensus 24 ~~~p~a~ldEl~~a~qd-m~~Mk~~-ydsl---lsaaaa-~~ns~yefsEaleemGsc---ll~kta~~dd~e~g~v~l~ 94 (633)
...|..++|...+++-| |-.+++. .+++ -.+..+ -.|. -+.+.|.++.++ |.++.+.=-++-.+++--.
T Consensus 19 ~~~~~~~le~v~~~~w~Y~~q~~~~a~~~v~ql~~sel~qel~~--~l~~~ld~l~~~~~~l~~~L~P~t~el~~~l~~~ 96 (165)
T 1gs9_A 19 EWQSGQRWELALGRFWDYLRWVQTLSEQVQEELLSSQVTQELRA--LMDETMKELKAYKSELEEQLTPVAEETRARLSKE 96 (165)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHSSHHHHHHHH--HHHHHHHHHHHHHHHHTTSCCCCCSHHHHHHHHH
T ss_pred ccCCCChHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHH--HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 34588889999999888 8888755 3333 223221 1111 344555555444 3333222234556666666
Q ss_pred HHhHHHHHHHHHHHHHHHh
Q 006738 95 LGKVQFELQKLVDAYRSHI 113 (633)
Q Consensus 95 lgk~q~EL~kL~d~yr~nI 113 (633)
+-.++.+|++-+..+|..|
T Consensus 97 ~e~Lr~~L~~d~EelR~~l 115 (165)
T 1gs9_A 97 LQAAQARLGADMEDVRGRL 115 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6667777777777776664
No 76
>2yf2_A C4B binding protein; immune system, complement system; 2.24A {Gallus gallus}
Probab=26.91 E-value=71 Score=26.11 Aligned_cols=30 Identities=33% Similarity=0.494 Sum_probs=27.1
Q ss_pred hhhhHHHHHHHhHHHHHHHHHHHHHHHhhh
Q 006738 86 EESGKVLLMLGKVQFELQKLVDAYRSHIFQ 115 (633)
Q Consensus 86 ~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~ 115 (633)
-|+-+.||..-|...||+-|-+.+..||.+
T Consensus 34 LEi~KL~LEIQKL~~EL~glskeflehilh 63 (65)
T 2yf2_A 34 LEIRKLFLEIQKLKVELQGLSKEFLEHILH 63 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHcchhHHHHHHHhc
Confidence 367889999999999999999999999975
No 77
>3r9v_A Invasin IPAD; type III secretion system, TIP protein, deoxycholate, cell I; HET: DXC; 1.90A {Shigella flexneri} SCOP: a.250.1.1 PDB: 2jaa_A 2j0n_A
Probab=26.68 E-value=55 Score=33.74 Aligned_cols=82 Identities=18% Similarity=0.278 Sum_probs=57.4
Q ss_pred HHHHHhHh-HHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHHH
Q 006738 33 ELAQASQD-MQDMRGCYDSLLSAAA-ATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYR 110 (633)
Q Consensus 33 El~~a~qd-m~~Mk~~ydsllsaaa-a~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~yr 110 (633)
|+.....+ +..|++.|=..++--. .++.=-..|.++|++|+.++..- . +|-..|=+...++...|.++++.|-
T Consensus 97 Elwa~Is~~I~~IksdYld~Ya~lvk~yTdyyQd~N~~lsk~s~~I~ag--g---~DGN~IkFd~~~lk~~l~~f~~kY~ 171 (286)
T 3r9v_A 97 ELWAKIANSINDINEQYLKVYEHAVSSYTQMYQDFSAVLSSLAGWISPG--G---NDGNSVKLQVNSLKKALEELKEKYK 171 (286)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEEE--S---SSSSEEEECHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--C---CCCCeeeecHHHHHHHHHHHHHHhc
Confidence 67766556 8889988877765443 35666678999999999988622 1 1222355666777788888888876
Q ss_pred HHhhhhccCCcHH
Q 006738 111 SHIFQTITIPSES 123 (633)
Q Consensus 111 ~nI~~tIt~PsES 123 (633)
++..+|..+
T Consensus 172 ----~~~L~P~~~ 180 (286)
T 3r9v_A 172 ----DKPLYPANN 180 (286)
T ss_dssp ----TCCSBCSSS
T ss_pred ----CCcccCCCC
Confidence 567778766
No 78
>4fp9_B Mterf domain-containing protein 2; modification enzyme, transferase; HET: SAM; 2.90A {Homo sapiens}
Probab=26.60 E-value=17 Score=37.41 Aligned_cols=22 Identities=23% Similarity=0.326 Sum_probs=11.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHh
Q 006738 198 RSLLTQAARHHAAQLSFVKKAL 219 (633)
Q Consensus 198 rsLLtqaaRhhaAQl~fF~~GL 219 (633)
..++++.|+-....-+.|+|-|
T Consensus 253 ~~F~~~vA~~s~eey~~F~k~~ 274 (335)
T 4fp9_B 253 AEFLARTACTSVEEFQVFKKLL 274 (335)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHH
Confidence 3445555555555555665555
No 79
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=26.39 E-value=2.5e+02 Score=29.64 Aligned_cols=64 Identities=13% Similarity=0.079 Sum_probs=34.2
Q ss_pred ccCCCCcccccccchhhHHHHHHHhHhHH-H-----HHHHHHHHHHHHHHHhhhHHHHHHHH-HHHhhhhh
Q 006738 14 HKHGDSKDRRDLRPLAQLDELAQASQDMQ-D-----MRGCYDSLLSAAAATANSAYEFSESL-QELGACLL 77 (633)
Q Consensus 14 h~~~~~ker~~~~p~a~ldEl~~a~qdm~-~-----Mk~~ydsllsaaaa~~ns~yefsEal-eemGscll 77 (633)
||||.+-...+.....++++++++++.-+ . ...--+-|...+.....+..++.+++ .|+|..+-
T Consensus 3 ~~~~~~~~~~~~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 73 (469)
T 3sza_A 3 HHHHSSGLVPRGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEW 73 (469)
T ss_dssp ---------------CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccccCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 44443333344557778888888877732 2 22334557777777888889998876 57776653
No 80
>2j69_A Bacterial dynamin-like protein; FZO, FZL, GTPase, hydrolase; 3.0A {Nostoc punctiforme} PDB: 2j68_A 2w6d_A*
Probab=26.35 E-value=2.4e+02 Score=31.20 Aligned_cols=58 Identities=19% Similarity=0.212 Sum_probs=40.0
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 006738 88 SGKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLNELQTVE-EMKRQCDEKRNVCEYMLM 150 (633)
Q Consensus 88 ~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLkeLk~Ve-emKkqcDekr~~YE~m~~ 150 (633)
..+..-++..++.||++++..+.++.+++ +..+++|+..+ ++-.+|++--..|+..++
T Consensus 632 ~~~~~~~i~~~~~~l~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 690 (695)
T 2j69_A 632 SKRINDDIVSRKSELDNLVKQKQTREINR-----ESEFNRLKNLQEDVIAQLQKIEAAYSNLLA 690 (695)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHH-----HHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 34445556667777777777777777766 66777777766 677777776666766665
No 81
>2j0o_A Invasin IPAD; type III secretion, cell invasion, T3SS, plasmid, virulence; 3.00A {Shigella flexneri} SCOP: a.250.1.1
Probab=26.30 E-value=60 Score=33.94 Aligned_cols=84 Identities=18% Similarity=0.281 Sum_probs=58.0
Q ss_pred HHHHHHHhHh-HHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHH
Q 006738 31 LDELAQASQD-MQDMRGCYDSLLSAAA-ATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDA 108 (633)
Q Consensus 31 ldEl~~a~qd-m~~Mk~~ydsllsaaa-a~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~ 108 (633)
-.|+.....+ +..++..|--.++--. .++.=...|.++|++|+.++... .+|-++|=+..-.++..|.++++.
T Consensus 117 ~~elw~~Is~~I~~I~sdYld~Ya~ivk~yTdyyQ~~ne~lskls~~I~aG-----g~DGn~IkFd~~~~k~~l~~~~~k 191 (318)
T 2j0o_A 117 HRELWAKIANSINDINEQYLKVYEHAVSSYTQMYQDFSAVLSSLAGWISPG-----GNDGNSVKLQVNSLKKALEELKEK 191 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEEC-----SSSSSCEEECHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCCCCeeeecHHHHHHHHHHHHHH
Confidence 3566666555 8888888766665433 35666678999999999888521 123446667777888888888888
Q ss_pred HHHHhhhhccCCcHH
Q 006738 109 YRSHIFQTITIPSES 123 (633)
Q Consensus 109 yr~nI~~tIt~PsES 123 (633)
|- ++..+|..+
T Consensus 192 Y~----~~~L~p~~~ 202 (318)
T 2j0o_A 192 YK----DKPLYPANN 202 (318)
T ss_dssp HS----SCEEESTTC
T ss_pred hc----CCcCCCCCC
Confidence 86 455566655
No 82
>2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20
Probab=26.17 E-value=3.4e+02 Score=26.77 Aligned_cols=66 Identities=12% Similarity=0.041 Sum_probs=39.3
Q ss_pred chhhhHHHHHHHhHHHHHHHHHHHHH-----HHhhhhccCCcHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 006738 85 NEESGKVLLMLGKVQFELQKLVDAYR-----SHIFQTITIPSESLLNELQTVE-EMKRQCDEKRNVCEYMLM 150 (633)
Q Consensus 85 d~e~g~v~l~lgk~q~EL~kL~d~yr-----~nI~~tIt~PsESLLkeLk~Ve-emKkqcDekr~~YE~m~~ 150 (633)
+++.++++..+...-.|+.+|++... ..|...+..|.+...+=..-++ =+++.+++..+.|+.++.
T Consensus 163 ~g~~~~al~~l~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~v~~l~~ai~~~~~~~a~~~~~~l~~ 234 (305)
T 2gno_A 163 ERDFKTALEAYKLGAEKLSGLMESLKVLETEKLLKKVLSKGLEGYLACRELLERFSKVESKEFFALFDQVTN 234 (305)
T ss_dssp GTCHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTTCSHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHccCCcchHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 57788888777555566666655543 4455555566655333222333 345667777777777764
No 83
>3zqe_A Protein PRGI, cell invasion protein SIPD; cell invasion complex, type III secretion, T3 complex, HOST pathogen interaction; HET: DXC; 2.19A {Salmonella enterica subsp} PDB: 3zqb_A* 2kv7_A 2x9c_A 2lpz_A 2jow_A
Probab=25.55 E-value=19 Score=37.30 Aligned_cols=88 Identities=20% Similarity=0.297 Sum_probs=60.0
Q ss_pred hHHHHHHHhHh-HHHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHH
Q 006738 30 QLDELAQASQD-MQDMRGCYDSLLSAA-AATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVD 107 (633)
Q Consensus 30 ~ldEl~~a~qd-m~~Mk~~ydsllsaa-aa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d 107 (633)
...||-+...+ +..+++.|=-.++-. ..++.=-.+|.++|.+|+.|+- +. .|-.+|=+....+...|.++++
T Consensus 92 S~selw~~I~~~I~~I~~~Yld~Ya~ivk~YTdyyQd~N~~LSkls~~Is---aG---kDGN~IkFd~~s~k~al~~l~~ 165 (305)
T 3zqe_A 92 SDAEIWDMVSQNISAIGDSYLGVYENVVAVYTDFYQAFSDILSKMGGWLL---PG---KDGNTVKLDVTSLKNDLNSLVN 165 (305)
T ss_dssp CHHHHHHHHHTSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTSGGGC-------------CEEECHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cC---CCCCeeeecHHHHHHHHHHHHH
Confidence 34677766666 888887665554432 2345666789999999988764 11 2222567788889999999999
Q ss_pred HHHHHhhhhccCCcHH
Q 006738 108 AYRSHIFQTITIPSES 123 (633)
Q Consensus 108 ~yr~nI~~tIt~PsES 123 (633)
.|-..=-+.+.+|.++
T Consensus 166 KY~~~~~~~~l~p~~~ 181 (305)
T 3zqe_A 166 KYNQINSNTVLFPAQS 181 (305)
T ss_dssp HHTSCSTTTEEESCCC
T ss_pred hccCCCccccccccCC
Confidence 9976555788888775
No 84
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=25.45 E-value=6.4e+02 Score=26.86 Aligned_cols=170 Identities=11% Similarity=0.090 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHHHhhhhhhhcc--c-----CCchhhhHHHHHHHhHHHHHHHHHHHHH
Q 006738 41 MQDMRGCYDSLLSAAAA---TANSAYEFSESLQELGACLLEKTA--L-----NDNEESGKVLLMLGKVQFELQKLVDAYR 110 (633)
Q Consensus 41 m~~Mk~~ydsllsaaaa---~~ns~yefsEaleemGscll~kta--~-----~dd~e~g~v~l~lgk~q~EL~kL~d~yr 110 (633)
+..+..+|..|+..+.. .-...|.|...+++.-.-+-+|.. . ++..++-.+.-+.-.++.||..--
T Consensus 71 ~~~L~~~y~~L~~~a~~Rr~~Le~L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~dv~~l~~khq~l~~EL~~~e---- 146 (450)
T 3r6n_A 71 IYQLEEEYENLLKASFERMDHLRQLQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKE---- 146 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCCCTTHHHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcChhhHHHHHHHHHHHHHHHHHch----
Confidence 77888999999988876 556788888888777666666521 1 122456666666777777765532
Q ss_pred HHhhhhccCCcHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccHHHHHHHHHhhHhhHhHHH
Q 006738 111 SHIFQTITIPSESLLNE----LQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFSLQQLQEAHDEYDQEATLFV 186 (633)
Q Consensus 111 ~nI~~tIt~PsESLLke----Lk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~eqle~~r~~fqEeaqmc~ 186 (633)
..|..+ .-=-+.|+.+ -..|++-....-..|+.+..... .++. -.++....+ +|..|+.=++
T Consensus 147 ~~i~~v-~~~G~~Li~~~Hpas~~I~~r~~~L~~~W~~L~~l~~-~R~~-----------~L~~a~~~~-QF~~Da~Eae 212 (450)
T 3r6n_A 147 KELNKL-KQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITK-CIDV-----------HLKENAAYF-QFFEEAQSTE 212 (450)
T ss_dssp HHHHHH-HHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHH-HHHH-----------HHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHH-HHHH-----------HHHHHHHHH-hHHHHHHHHH
Confidence 222222 2224555541 12233222233344555544433 1110 012222222 4555666555
Q ss_pred HHHh----hhcc----CCchhH--HHHHHHHHHHHHHHHHHHhhhhhccchHHHHHHhh
Q 006738 187 FRLK----SLKQ----GQSRSL--LTQAARHHAAQLSFVKKALKSLEAVDPHVKMVAEQ 235 (633)
Q Consensus 187 frLK----sLKq----gq~rsL--LtqaaRhhaAQl~fF~~GLKsLE~lephVk~lae~ 235 (633)
=-|+ .|.. ..|.++ ++.+.|-|.+. -+.|++.+..|+.|.++
T Consensus 213 sWL~eke~~l~s~y~~D~g~d~~~~e~LLkkh~~l-------e~~l~~~~~~I~~L~~q 264 (450)
T 3r6n_A 213 AYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKE-------REKILEYKRQVQNLVNK 264 (450)
T ss_dssp HHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccCcCCCCHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 5555 2222 124444 67788887763 23556666666666544
No 85
>3i9y_A Sensor protein; stacked two four-helix bundles, ATP-binding, kinase, nucleotide-binding, phosphoprotein, transferase, transmembrane; 2.16A {Vibrio parahaemolyticus} PDB: 3o1i_A* 3o1h_A* 3o1j_A
Probab=24.92 E-value=3.6e+02 Score=27.33 Aligned_cols=102 Identities=13% Similarity=0.202 Sum_probs=56.3
Q ss_pred HhHHHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccHHHHHHHH
Q 006738 96 GKVQFELQKLVDAYRSHIFQTITIPSESLLNELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFSLQQLQEAH 175 (633)
Q Consensus 96 gk~q~EL~kL~d~yr~nI~~tIt~PsESLLkeLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~eqle~~r 175 (633)
..=-+||.-+......+|..+.+ +.+...+.+++.+|..-+..-+..+..-..-+ -+.||+...
T Consensus 160 ~eRm~ELrl~Al~l~~~i~~~~~------~~~~~~l~~l~~~~~~~l~il~rRv~~I~DP~----------R~~q~~~lL 223 (276)
T 3i9y_A 160 TERLHELHLLAFKMLNQIEEART------LTNVDRIQQIQTAFENNLKIMKRRVLAVEDPT----------RSKQMSQLL 223 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT------CCCHHHHHHHHHHHHHHHHHHHHHHHTCCSHH----------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH------hcchhhHHHHHHHHHHHHHHHHHHHHhcCCch----------HHHHHHHHH
Confidence 33346666677777777776655 22334455677777666655555444222222 246676666
Q ss_pred HhhHhhHhHHHHHHhhhccCCchhHHHHHHHHHHHHHH
Q 006738 176 DEYDQEATLFVFRLKSLKQGQSRSLLTQAARHHAAQLS 213 (633)
Q Consensus 176 ~~fqEeaqmc~frLKsLKqgq~rsLLtqaaRhhaAQl~ 213 (633)
..-+..-.+|..+-..+.-.+-.+.|.|..-....++|
T Consensus 224 ~~L~~~~~l~~l~~q~~~~~~~~~~l~q~~~~~f~~Ln 261 (276)
T 3i9y_A 224 TELGKRQVVFTILLQQYENNEQSQQLMQKTLELFSELN 261 (276)
T ss_dssp HHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555555666655555555555555555544444444
No 86
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=24.86 E-value=1.3e+02 Score=26.82 Aligned_cols=22 Identities=5% Similarity=-0.025 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 006738 128 LQTVEEMKRQCDEKRNVCEYML 149 (633)
Q Consensus 128 Lk~VeemKkqcDekr~~YE~m~ 149 (633)
|..+-....++++..+.|+..+
T Consensus 165 l~~~~~~~~~~~~A~~~~~~al 186 (330)
T 3hym_B 165 IGLEYGLTNNSKLAERFFSQAL 186 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHH
Confidence 3344444556666666666554
No 87
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=24.74 E-value=4.3e+02 Score=24.65 Aligned_cols=24 Identities=13% Similarity=0.091 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 006738 127 ELQTVEEMKRQCDEKRNVCEYMLM 150 (633)
Q Consensus 127 eLk~VeemKkqcDekr~~YE~m~~ 150 (633)
.|..+--...+++++.+.|+..+.
T Consensus 268 ~la~~~~~~g~~~~A~~~~~~al~ 291 (411)
T 4a1s_A 268 NLGNSHIFLGQFEDAAEHYKRTLA 291 (411)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHH
Confidence 444444455667777777776654
No 88
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=24.38 E-value=50 Score=30.59 Aligned_cols=30 Identities=23% Similarity=0.090 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccchHHHHHHhhhh
Q 006738 202 TQAARHHAAQLSFVKKALKSLEAVDPHVKMVAEQQH 237 (633)
Q Consensus 202 tqaaRhhaAQl~fF~~GLKsLE~lephVk~lae~~h 237 (633)
..||+.|.....-|.+ .++-+|++-|+.-+
T Consensus 124 ~~aa~~~~~d~~~y~~------~~r~~~~~~a~~~~ 153 (169)
T 1ayz_A 124 VEAATLFKDHKSQYVK------RVKETVEKSWEDDM 153 (169)
T ss_dssp HHHHHHHHHCHHHHHH------HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCHHHHHH------HHHHHHHHHcCCCc
Confidence 3455555544444443 34455555555443
No 89
>3nft_A Translocator protein BIPD; virulence, translocation, transport protein; 1.51A {Burkholderia pseudomallei} PDB: 2ixr_A 2j9t_A* 2izp_A
Probab=24.12 E-value=66 Score=33.39 Aligned_cols=82 Identities=13% Similarity=0.270 Sum_probs=56.3
Q ss_pred ccchhhHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHH
Q 006738 25 LRPLAQLDELAQASQDMQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQK 104 (633)
Q Consensus 25 ~~p~a~ldEl~~a~qdm~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~k 104 (633)
.+|---|-||.+....-.+--+-|..++... +.=-..|.++|++|+.+.-. . |+ ..|=+....++..|.+
T Consensus 117 ~~~~p~~~~L~d~I~ngkdYlDvYa~IVk~Y---TdyyQdfNe~LSKlSd~IsA----k-DG--N~IKFD~~sfk~~l~~ 186 (303)
T 3nft_A 117 IQPDPILQGLVDVIGQGKSDIDAYATIVEGL---TKYFQSVADVMSKLQDYISA----K-DD--KNMKIDGGKIKALIQQ 186 (303)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHGGGGEEE----E-TT--TEEEECHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHhccHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhccc----c-CC--CeeeecHHHHHHHHHH
Confidence 4566666677766555555566677776665 44456799999999876642 1 21 2255667778888899
Q ss_pred HHHHHHHHhhhhccCCc
Q 006738 105 LVDAYRSHIFQTITIPS 121 (633)
Q Consensus 105 L~d~yr~nI~~tIt~Ps 121 (633)
+++.|- ++.+|+
T Consensus 187 l~~kY~-----~v~~Ps 198 (303)
T 3nft_A 187 VIDHLP-----TMQLPK 198 (303)
T ss_dssp HHHTCC-----EEECCT
T ss_pred HHHhcC-----CCCCCC
Confidence 999995 799994
No 90
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=23.90 E-value=4.4e+02 Score=25.66 Aligned_cols=128 Identities=14% Similarity=0.058 Sum_probs=63.7
Q ss_pred HhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHH-----------HHHHHHHH
Q 006738 39 QDMQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQ-----------FELQKLVD 107 (633)
Q Consensus 39 qdm~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q-----------~EL~kL~d 107 (633)
.+++.|-+.|..+.+.= .+-+++-=.+|-.+...++=.++=.-+..|-.|. -+|..++.
T Consensus 7 ~e~e~~~~eYe~~as~L----------l~WI~~~~~~l~~r~f~~sl~~vq~~l~~f~~fr~~ekppk~~EK~~Le~ll~ 76 (235)
T 2odv_A 7 NELQLRWQEYRELVLLL----------LQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQ 76 (235)
T ss_dssp -CHHHHHHHHHHHHHHH----------HHHHHHHHHHHHCC-CCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----------HHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 34788888887765433 3333333333333332232223332233333332 13334444
Q ss_pred HHHHHhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccH-HHHHHHHHhhHhhHhHHH
Q 006738 108 AYRSHIFQTITIPSESLLNELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFSL-QQLQEAHDEYDQEATLFV 186 (633)
Q Consensus 108 ~yr~nI~~tIt~PsESLLkeLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~-eqle~~r~~fqEeaqmc~ 186 (633)
++.+.+-..--.|.+.+. +.| .+++|...+.- |++|.+.=..+ +.| |-|+.-...|+.+|.+|+
T Consensus 77 ~lqtklr~~~~~ppeg~~-----~~d----i~~~W~~Le~a-----e~eRe~aL~~e-l~RlerLe~La~kf~rka~~~e 141 (235)
T 2odv_A 77 SLEGAVQAGQLKVPPGYH-----PLD----VEKEWGKLHVA-----ILEREKQLRSE-FERLEALQRIVTKLQMEAGLAE 141 (235)
T ss_dssp HHHHHHHTTSSCCCTTCS-----HHH----HHHHHHHHHHH-----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCC-----HHH----HHHHHHHHHHH-----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 443333322233444443 222 36778776652 34443322222 222 568889999999999999
Q ss_pred HHHhh
Q 006738 187 FRLKS 191 (633)
Q Consensus 187 frLKs 191 (633)
=.|..
T Consensus 142 ~~L~~ 146 (235)
T 2odv_A 142 EQLNQ 146 (235)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88863
No 91
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=23.88 E-value=3.3e+02 Score=25.76 Aligned_cols=27 Identities=26% Similarity=0.413 Sum_probs=15.8
Q ss_pred chhhHHHHHHHhHh--HHHHHHHHHHHHH
Q 006738 27 PLAQLDELAQASQD--MQDMRGCYDSLLS 53 (633)
Q Consensus 27 p~a~ldEl~~a~qd--m~~Mk~~ydslls 53 (633)
|.+.|+|.-.+.+. .++=.++|..++.
T Consensus 4 p~~~l~~a~~l~~~~~y~eA~~~~~~~l~ 32 (434)
T 4b4t_Q 4 PGSKLEEARRLVNEKQYNEAEQVYLSLLD 32 (434)
T ss_dssp TTHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 66777777655433 5555555555544
No 92
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=23.84 E-value=3.8e+02 Score=27.07 Aligned_cols=64 Identities=13% Similarity=0.238 Sum_probs=31.9
Q ss_pred chhhhHHHHHHHhHHHHHHHH---HHHHHHHhhhhccCCcH-HHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 006738 85 NEESGKVLLMLGKVQFELQKL---VDAYRSHIFQTITIPSE-SLLNELQTVE-EMKRQCDEKRNVCEYMLMR 151 (633)
Q Consensus 85 d~e~g~v~l~lgk~q~EL~kL---~d~yr~nI~~tIt~PsE-SLLkeLk~Ve-emKkqcDekr~~YE~m~~~ 151 (633)
++....+++.+|.+-..+..+ +..|..-+-. .|.. ..+..|..+. .+++.-+..++.|..|+..
T Consensus 347 ~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l---~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f~k 415 (457)
T 1kt0_A 347 DSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV---NPQNKAARLQISMCQKKAKEHNERDRRIYANMFKK 415 (457)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT---C----CHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345567777888776655332 3333332221 2322 3445777777 4444444445668888753
No 93
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=23.70 E-value=6.5e+02 Score=27.78 Aligned_cols=134 Identities=12% Similarity=0.119 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHhhhhcc--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccH-------
Q 006738 98 VQFELQKLVDAYRSHIFQTIT--IPSESLLNELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFSL------- 168 (633)
Q Consensus 98 ~q~EL~kL~d~yr~nI~~tIt--~PsESLLkeLk~VeemKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~------- 168 (633)
+..++.++++.|.+.--.-+- .=+...|++...+++.--|-|++=..+|-.++ .|+.|++.+..+.-..
T Consensus 436 ~~~~~~~~~~~Y~~~~~kg~~~~~vl~~fl~~~~~~~~~ilq~d~~l~~~~k~~~--~~~~~~e~~~~~~~~l~~~~~~~ 513 (592)
T 1f5n_A 436 FVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIE--VERVKAESAQASAKMLHEMQRKN 513 (592)
T ss_dssp HHHHHHHHHHHHHHSSCCCTTHHHHHHHHHHHTHHHHHHHHHHCSSSCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667777777554210000 00223344444444444444555444544332 2333333333333222
Q ss_pred -HHHHHHHHhhHhhHhHHHHHHhhhccCCchhHHHHHHHH-HHHHHHHHHHHhhh-hhccchHHHHHHh
Q 006738 169 -QQLQEAHDEYDQEATLFVFRLKSLKQGQSRSLLTQAARH-HAAQLSFVKKALKS-LEAVDPHVKMVAE 234 (633)
Q Consensus 169 -eqle~~r~~fqEeaqmc~frLKsLKqgq~rsLLtqaaRh-haAQl~fF~~GLKs-LE~lephVk~lae 234 (633)
+.|+...+.|||-.....=.+.+=+ .+-.-=++.++.| ..-|-.+-+.|++. .+.+.--|..|=.
T Consensus 514 ~~~~~~~~~~~~e~~~ql~~kme~~~-~~~~~e~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ei~~l~~ 581 (592)
T 1f5n_A 514 EQMMEQKERSYQEHLKQLTEKMENDR-VQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQT 581 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2244445555554443332222111 0111112222333 33467777777652 3444444444433
No 94
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=23.46 E-value=2.1e+02 Score=23.72 Aligned_cols=21 Identities=5% Similarity=-0.009 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 006738 129 QTVEEMKRQCDEKRNVCEYML 149 (633)
Q Consensus 129 k~VeemKkqcDekr~~YE~m~ 149 (633)
..+.....++++..+.|+..+
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~ 100 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAI 100 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHH
Confidence 333344555666666555543
No 95
>2ym9_A Cell invasion protein SIPD; type 3 secretion, T3SS, needle TIP protein, H pathogen interaction, bacterial pathogenesis, TIP complex; 3.00A {Salmonella enterica subsp}
Probab=22.08 E-value=31 Score=36.39 Aligned_cols=86 Identities=19% Similarity=0.286 Sum_probs=57.4
Q ss_pred HHHHHHHhHh-HHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHH
Q 006738 31 LDELAQASQD-MQDMRGCYDSLLSAAA-ATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDA 108 (633)
Q Consensus 31 ldEl~~a~qd-m~~Mk~~ydsllsaaa-a~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~ 108 (633)
..||-....+ +..+++.|=-.+.-.. .++.=-.+|.++|.+|+.++- +. .|-++|=+..-++..+|.++++.
T Consensus 134 ~aeLW~~Is~~I~~I~sdYldvYa~Ivk~YTdyyQd~Ne~LSKlSd~Is---aG---kDGN~IkFd~~s~k~~l~~l~~K 207 (346)
T 2ym9_A 134 DAEIWDMVSQNISAIGDSYLGVYENVVAVYTDFYQAFSDILSKMGGWLL---PG---KDGNTVKLDVTSLKNDLNSLVNK 207 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHGGGGGGEE---EC---SSSSEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---cC---CCCCeeeecHHHHHHHHHHHHHh
Confidence 4677766555 8888876655554332 245556789999999986663 21 22235667778889999999999
Q ss_pred HHHHhhhhccCCcH
Q 006738 109 YRSHIFQTITIPSE 122 (633)
Q Consensus 109 yr~nI~~tIt~PsE 122 (633)
|-..=-+++.||.+
T Consensus 208 Y~~~~~~~~lfpa~ 221 (346)
T 2ym9_A 208 YNQINSNTVLFPAQ 221 (346)
T ss_dssp TTSCSTTTEEESCC
T ss_pred ccCCCcCccccccc
Confidence 96533346767765
No 96
>1jfi_B DR1 protein, transcription regulator NC2 beta chain; histone, H2A/H2B, tata-DNA, transcription initiation, NC2, negative cofactor, structural genomics, PSI; 2.62A {Homo sapiens} SCOP: a.22.1.3
Probab=22.05 E-value=2.7e+02 Score=26.76 Aligned_cols=43 Identities=14% Similarity=0.184 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccHHHHHHHHHh
Q 006738 133 EMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFSLQQLQEAHDE 177 (633)
Q Consensus 133 emKkqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~eqle~~r~~ 177 (633)
++..++...-..|..+.. .++ .++...+..|++.|||.+...+
T Consensus 85 ~fv~~lk~~L~~yre~~~-~kk-r~~~K~~~sg~~~Eel~~~Qqe 127 (179)
T 1jfi_B 85 SYISEVKEVLQECKTVAL-KRR-KASSRLENLGIPEEELLRQQQE 127 (179)
T ss_dssp GGHHHHHHHHHHHHHHHH-HHH-HHHHHHHHSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hCc-cccchhhccCCCHHHHHHHHHH
Confidence 334444444445555544 222 2234455677888888766544
No 97
>3q5d_A Atlastin-1; G protein, GTPase, GDP/GTP binding, hydrolase; HET: GDP; 2.70A {Homo sapiens} PDB: 3q5e_A* 3qnu_A* 3qof_A*
Probab=21.69 E-value=6e+02 Score=26.98 Aligned_cols=104 Identities=17% Similarity=0.164 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhhhhhhhcc-----cCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHHHHHHH
Q 006738 62 AYEFSESLQELGACLLEKTA-----LNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLNELQTVEEMKR 136 (633)
Q Consensus 62 ~yefsEaleemGscll~kta-----~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLkeLk~VeemKk 136 (633)
..+|.+.++++-.+++.... .+...-.|.. |..++++|+..|++--..=.+|.+.=+-..+ -.+
T Consensus 290 ~~~F~~~l~~l~~~i~~~~~~~~K~~~G~~vtg~~----------L~~~~~~yv~ain~~~~P~~~s~~~~~a~~~-~~~ 358 (447)
T 3q5d_A 290 DDEFIKNLKILIPWLLSPESLDIKEINGNKITCRG----------LVEYFKAYIKIYQGEELPHPKSMLQATAEAN-NLA 358 (447)
T ss_dssp CHHHHHHHHHHHHHHHSTTTCCCCEETTEECBHHH----------HHHHHHHHHHHHHHSCCCCCCCHHHHHHHHH-HHH
T ss_pred cHHHHHHHHHHHHHhcCcccccccccCCEeecHHH----------HHHHHHHHHHHHhCCCCCCcchHHHHHHHHH-HHH
Confidence 37899999999999984321 1222333443 4446788888887653333344443221111 122
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCCCCccccHHHHHHHHHhhHhhH
Q 006738 137 QCDEKRNVCEYMLMRQREKGRSKNGKGETFSLQQLQEAHDEYDQEA 182 (633)
Q Consensus 137 qcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~eqle~~r~~fqEea 182 (633)
-.+++-+.|+..+.+.. .+..-.++.++|+..+.+..++|
T Consensus 359 a~~~A~~~Y~~~m~~~~------~~~~p~~~~~~L~~~h~~~~~~a 398 (447)
T 3q5d_A 359 AVATAKDTYNKKMEEIC------GGDKPFLAPNDLQTKHLQLKEES 398 (447)
T ss_dssp HHHHHHHHHHHHHHHHH------CSSSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh------cCCCCCCCHHHHHHHHHHHHHHH
Confidence 23445556766654211 12233457899999998887543
No 98
>3axj_A GM27569P, translin; translin/TRAX heterodimer, passenger RNA cleavage, RNAse, DN protein; 2.10A {Drosophila melanogaster} PDB: 2qva_A 2qrx_A 3riu_A
Probab=21.04 E-value=6e+02 Score=24.98 Aligned_cols=78 Identities=18% Similarity=0.169 Sum_probs=42.0
Q ss_pred HHHHHHHhHh-HHHHHHHHHHHHHHHHHHhhhHHHH----HHHHHHHhhhh-----hhhcccCCchhhh-----------
Q 006738 31 LDELAQASQD-MQDMRGCYDSLLSAAAATANSAYEF----SESLQELGACL-----LEKTALNDNEESG----------- 89 (633)
Q Consensus 31 ldEl~~a~qd-m~~Mk~~ydsllsaaaa~~ns~yef----sEaleemGscl-----l~kta~~dd~e~g----------- 89 (633)
+.++++.++. +..+++.|..|..... -+..|-| +-++||+...+ |+...+-.-+++|
T Consensus 69 ~~~~~~eA~~~l~~i~~~~~~L~~~l~--~~~~yrY~~~~s~~lQE~VEA~~f~~yL~~~~L~t~eev~~~L~~~~~~~~ 146 (249)
T 3axj_A 69 ISAACGLARKQVELCAQKYQKLAELVP--AGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGLKISQSE 146 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSC--TTCHHHHGGGTHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHTCBSSTTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhc--cCchHHHhhhccHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHhccccCCCc
Confidence 5666655554 8888888887755432 2233333 23444433221 2222233334455
Q ss_pred -------HHHHHHHhHHHHHHHHHHHHH
Q 006738 90 -------KVLLMLGKVQFELQKLVDAYR 110 (633)
Q Consensus 90 -------~v~l~lgk~q~EL~kL~d~yr 110 (633)
.-|+=|+-++-||+++.=|..
T Consensus 147 ~f~v~~edYLlGL~DLtGEL~R~ain~v 174 (249)
T 3axj_A 147 GFHLDVEDYLLGILQLASELSRFATNSV 174 (249)
T ss_dssp SSBCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHhHHHHHHHHHH
Confidence 345667777889988765443
No 99
>2pjw_V Vacuolar protein sorting-associated protein 27; GAT domain, core complex, doamin SWAP, endocytosis/exocytosis complex; 3.01A {Saccharomyces cerevisiae}
Probab=21.01 E-value=4.1e+02 Score=23.00 Aligned_cols=79 Identities=14% Similarity=0.163 Sum_probs=62.5
Q ss_pred HHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHHHHHHH
Q 006738 57 ATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLNELQTVEEMKR 136 (633)
Q Consensus 57 a~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~nI~~tIt~PsESLLkeLk~VeemKk 136 (633)
+-+++-+-|+.-++.|-+-= ....-+|+.+-..+-+.+...=.|.++++.|.+... +.-||-.
T Consensus 6 ~e~d~I~lF~~lv~~~k~~~--~~~i~~d~~LqeLy~kv~~lRPKL~r~l~~~~~K~~---------------~L~~mn~ 68 (91)
T 2pjw_V 6 EEKDSIYMFASLVEKMKSRP--LNEILEDSKLQNLAQRVFASKARLNYALNDKAQKYN---------------TLIEMNG 68 (91)
T ss_dssp HHHHHHHHHHHHHHHHHTCS--CSTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCC--cccccCCHHHHHHHHHHHhHhHHHHHHHHHHHHHHH---------------HHHHHHH
Confidence 34677889999999997761 222226789999999999999999999999987643 3458999
Q ss_pred HHHHHHHHHHHHHHHH
Q 006738 137 QCDEKRNVCEYMLMRQ 152 (633)
Q Consensus 137 qcDekr~~YE~m~~~~ 152 (633)
.|-+.++.|+.++.++
T Consensus 69 Kls~a~rlYD~lLE~~ 84 (91)
T 2pjw_V 69 KISEIMNIYDRLLEQQ 84 (91)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999744
No 100
>2byk_A Chrac-16; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_A
Probab=20.99 E-value=32 Score=31.66 Aligned_cols=22 Identities=0% Similarity=0.004 Sum_probs=17.8
Q ss_pred HHHHHHHHhhHhhHhHHHHHHh
Q 006738 169 QQLQEAHDEYDQEATLFVFRLK 190 (633)
Q Consensus 169 eqle~~r~~fqEeaqmc~frLK 190 (633)
.=+.++-++|=.+++.+.|..-
T Consensus 44 vliakA~ElFI~~Lt~~A~~~a 65 (140)
T 2byk_A 44 FLMTKCTELFVRHLAGAAYTEE 65 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5578899999988888888763
No 101
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=20.95 E-value=1.7e+02 Score=29.75 Aligned_cols=189 Identities=17% Similarity=0.127 Sum_probs=0.0
Q ss_pred chhhHHHHHHHhHh-HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhh-----hhhhcccCCchhhhHHHHHHHhHHH
Q 006738 27 PLAQLDELAQASQD-MQDMRGCYDSLLSAAAATANSAYEFSESLQELGAC-----LLEKTALNDNEESGKVLLMLGKVQF 100 (633)
Q Consensus 27 p~a~ldEl~~a~qd-m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGsc-----ll~kta~~dd~e~g~v~l~lgk~q~ 100 (633)
|.....+.....+. +.+.-..++.+.......+.-.+....++..+|.. -..+.++.-+++...++..||.+-.
T Consensus 69 ~~~~~~~~~~~~~~~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~ 148 (474)
T 4abn_A 69 SVEDAGRKQQDVQEEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYW 148 (474)
T ss_dssp CGGGGGGHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhhhhccCCcHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHhhccccCCCCccccH---
Q 006738 101 ELQKLVDAYRSHIFQTITIPSESLLNELQTVEEMK---------RQCDEKRNVCEYMLMRQREKGRSKNGKGETFSL--- 168 (633)
Q Consensus 101 EL~kL~d~yr~nI~~tIt~PsESLLkeLk~VeemK---------kqcDekr~~YE~m~~~~~EKgr~k~~K~e~~i~--- 168 (633)
++..+-+-...----+-..|--..+..|..+-... ..++++.+.|+..+...-+-...-...+..+..
T Consensus 149 ~~g~~~~A~~~~~~al~~~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~ 228 (474)
T 4abn_A 149 KKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYF 228 (474)
T ss_dssp HHTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q ss_pred ------HHHHHHHHhhHhhHhHHHHHHhhhccC---CchhHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 006738 169 ------QQLQEAHDEYDQEATLFVFRLKSLKQG---QSRSLLTQAARHHAAQLSFVKKALKSLEAV 225 (633)
Q Consensus 169 ------eqle~~r~~fqEeaqmc~frLKsLKqg---q~rsLLtqaaRhhaAQl~fF~~GLKsLE~l 225 (633)
.+.+++...|+.-+.+ .. ....++.+++.-|..+-+ |.+++++++..
T Consensus 229 ~~~~~~g~~~~A~~~~~~al~~---------~p~~~~~~~~~~~lg~~~~~~g~-~~~A~~~~~~a 284 (474)
T 4abn_A 229 NTGQNPKISQQALSAYAQAEKV---------DRKASSNPDLHLNRATLHKYEES-YGEALEGFSQA 284 (474)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHH---------CGGGGGCHHHHHHHHHHHHHTTC-HHHHHHHHHHH
T ss_pred hhccccchHHHHHHHHHHHHHh---------CCCcccCHHHHHHHHHHHHHcCC-HHHHHHHHHHH
No 102
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=20.93 E-value=6.3e+02 Score=25.15 Aligned_cols=36 Identities=14% Similarity=0.125 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhh-hhhccchHHHHHHh
Q 006738 199 SLLTQAARHHAAQLSFVKKALK-SLEAVDPHVKMVAE 234 (633)
Q Consensus 199 sLLtqaaRhhaAQl~fF~~GLK-sLE~lephVk~lae 234 (633)
.-|+.++.+-.-|..=||.-|. ..|+++.|+...++
T Consensus 205 ~~l~~~~~~~~qq~e~f~~~~~p~~e~~~~~l~~~~e 241 (273)
T 3s84_A 205 KSLAELGGHLDQQVEEFRRRVEPYGENFNKALVQQME 241 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHH
Confidence 3456666666667777877663 34555555554444
No 103
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=20.91 E-value=7.4e+02 Score=26.63 Aligned_cols=87 Identities=17% Similarity=0.332 Sum_probs=41.8
Q ss_pred HHhHh----HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhcccCCchhhhHHHHHHHhHHHHHHHHHHHHHH
Q 006738 36 QASQD----MQDMRGCYDSLLSAAAATANSAYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYRS 111 (633)
Q Consensus 36 ~a~qd----m~~Mk~~ydsllsaaaa~~ns~yefsEaleemGscll~kta~~dd~e~g~v~l~lgk~q~EL~kL~d~yr~ 111 (633)
++.|| |.++|+-.+.+ ...-.+.+.|+..|-++=.-=++. +.++|.- ++.+..||.+=+.-+..
T Consensus 60 k~er~~~~rIe~L~~~L~~~----s~s~~~~~~y~~~~~~~lk~~~~q-~~dndn~-------~~e~s~eLe~~i~~lk~ 127 (390)
T 1deq_A 60 EVDQDFTSRINKLRDSLFNY----QKNSKDSNTLTKNIVELMRGDFAK-ANNNDNT-------FKQINEDLRSRIEILRR 127 (390)
T ss_pred HhhhhHHHHHHHHHHHHHHH----HHhhhHHHHHHHHHHHHHHHHHHh-hccchHH-------HHHHHHHHHHHHHHHHH
Confidence 45555 44444444333 234455666666666554443322 2222332 34455566665555556
Q ss_pred HhhhhccCCcHHHHH-HHHHHH-HHHH
Q 006738 112 HIFQTITIPSESLLN-ELQTVE-EMKR 136 (633)
Q Consensus 112 nI~~tIt~PsESLLk-eLk~Ve-emKk 136 (633)
+|.+.|. .-.+|+ .|+.+- +|||
T Consensus 128 ~V~~q~~--~ir~Lq~~l~~q~~kiqR 152 (390)
T 1deq_A 128 KVIEQVQ--RINLLQKNVRDQLVDMKR 152 (390)
T ss_pred HHHHHhH--HHHHHHHHHHHHHHHHHH
Confidence 6666544 333333 444444 5554
No 104
>2bk9_A CG9734-PA; oxygen transport, drosophila melanogaster hemoglobin, heme hexacoordination, insect hemoglobin, protein cavities; HET: HEM CXS; 1.2A {Drosophila melanogaster} PDB: 2g3h_A*
Probab=20.14 E-value=2.3e+02 Score=24.80 Aligned_cols=20 Identities=5% Similarity=0.162 Sum_probs=14.7
Q ss_pred hhHHHHHHHHHHHhhhhhhh
Q 006738 60 NSAYEFSESLQELGACLLEK 79 (633)
Q Consensus 60 ns~yefsEaleemGscll~k 79 (633)
.+...+...|.+||.-...+
T Consensus 80 dd~~~l~~~l~~L~~~H~~~ 99 (153)
T 2bk9_A 80 GDLEKLDEIWTKIAVSHIPR 99 (153)
T ss_dssp THHHHHHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHHHHhcc
Confidence 45677788888888877654
Done!