Query 006739
Match_columns 633
No_of_seqs 592 out of 4534
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 07:40:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006739.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006739hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 2E-55 6.7E-60 439.7 17.3 263 336-632 12-288 (299)
2 3omv_A RAF proto-oncogene seri 100.0 7.6E-55 2.6E-59 435.2 20.7 265 334-633 33-300 (307)
3 4aoj_A High affinity nerve gro 100.0 1.4E-54 4.6E-59 439.7 22.0 263 336-632 40-318 (329)
4 4gt4_A Tyrosine-protein kinase 100.0 6.5E-55 2.2E-59 437.8 18.3 263 337-632 26-305 (308)
5 4b9d_A Serine/threonine-protei 100.0 6.7E-53 2.3E-57 427.0 18.4 254 336-626 23-276 (350)
6 4g3f_A NF-kappa-beta-inducing 100.0 8E-53 2.8E-57 424.5 18.0 257 333-631 54-314 (336)
7 4fih_A Serine/threonine-protei 100.0 1.6E-52 5.5E-57 423.5 19.3 251 336-626 73-323 (346)
8 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.1E-53 2.8E-57 419.3 16.0 251 337-625 32-283 (311)
9 3hmm_A TGF-beta receptor type- 100.0 2.9E-52 1E-56 419.8 19.3 267 338-632 4-296 (303)
10 4ase_A Vascular endothelial gr 100.0 7.5E-53 2.6E-57 430.3 14.9 266 334-631 61-345 (353)
11 3fpq_A Serine/threonine-protei 100.0 8.2E-52 2.8E-56 410.3 20.7 247 340-626 29-282 (290)
12 3hyh_A Carbon catabolite-derep 100.0 3.3E-51 1.1E-55 402.3 21.3 248 337-626 13-262 (275)
13 4fie_A Serine/threonine-protei 100.0 3.2E-51 1.1E-55 424.2 20.7 251 336-626 150-400 (423)
14 3ubd_A Ribosomal protein S6 ki 100.0 2.3E-51 7.7E-56 409.1 13.9 245 337-621 24-271 (304)
15 4g31_A Eukaryotic translation 100.0 2.2E-49 7.6E-54 396.6 19.1 253 337-626 5-279 (299)
16 4b99_A Mitogen-activated prote 100.0 3.8E-47 1.3E-51 395.0 22.1 265 337-626 54-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.1E-46 3.7E-51 387.6 21.6 200 335-560 19-249 (361)
18 2qkw_B Protein kinase; three-h 100.0 1.2E-45 4.1E-50 377.3 23.1 279 333-631 35-313 (321)
19 3v5w_A G-protein coupled recep 100.0 5.9E-46 2E-50 401.5 21.1 254 336-625 188-448 (689)
20 3uim_A Brassinosteroid insensi 100.0 1.1E-45 3.9E-50 378.4 21.5 282 333-630 26-308 (326)
21 3uto_A Twitchin; kinase, muscl 100.0 6.9E-45 2.3E-49 396.7 20.5 252 336-626 156-410 (573)
22 3p86_A Serine/threonine-protei 100.0 8.3E-44 2.8E-48 361.0 21.4 261 335-632 35-297 (309)
23 3s95_A LIMK-1, LIM domain kina 100.0 1.8E-43 6.1E-48 359.3 21.8 259 336-632 9-281 (310)
24 3soc_A Activin receptor type-2 100.0 6.8E-44 2.3E-48 364.2 18.8 268 335-632 22-317 (322)
25 2psq_A Fibroblast growth facto 100.0 1.1E-43 3.6E-48 369.4 19.9 264 335-631 79-362 (370)
26 3fxz_A Serine/threonine-protei 100.0 7.6E-43 2.6E-47 352.1 22.6 253 334-626 17-269 (297)
27 2nru_A Interleukin-1 receptor- 100.0 2.7E-42 9.2E-47 350.1 25.2 270 341-632 35-305 (307)
28 3fe3_A MAP/microtubule affinit 100.0 6.9E-43 2.3E-47 356.7 20.5 249 336-626 14-264 (328)
29 3lb7_A RAF proto-oncogene seri 100.0 1.1E-42 3.8E-47 352.5 21.1 265 334-633 33-300 (307)
30 3zgw_A Maternal embryonic leuc 100.0 7.6E-43 2.6E-47 358.4 20.1 252 334-626 7-260 (347)
31 3vhe_A Vascular endothelial gr 100.0 6.5E-43 2.2E-47 362.9 19.5 268 333-632 18-354 (359)
32 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.5E-42 5.2E-47 344.8 20.9 258 335-633 6-264 (268)
33 4hcu_A Tyrosine-protein kinase 100.0 2E-43 6.9E-48 351.3 14.4 258 334-632 7-265 (269)
34 3cbl_A C-FES, proto-oncogene t 100.0 2.9E-43 1E-47 367.4 16.0 263 333-632 110-373 (377)
35 4eqm_A Protein kinase; transfe 100.0 2E-42 6.9E-47 348.5 20.8 263 336-631 10-273 (294)
36 3l9p_A Anaplastic lymphoma kin 100.0 9.4E-43 3.2E-47 362.0 18.3 264 336-632 70-344 (367)
37 1luf_A Muscle-specific tyrosin 100.0 4.3E-43 1.5E-47 361.9 15.6 267 333-632 43-334 (343)
38 4euu_A Serine/threonine-protei 100.0 6.5E-42 2.2E-46 349.3 23.7 275 336-631 8-307 (319)
39 2qol_A Ephrin receptor; recept 100.0 4.7E-43 1.6E-47 364.8 15.4 262 334-631 42-307 (373)
40 2eva_A TAK1 kinase - TAB1 chim 100.0 5.3E-42 1.8E-46 347.7 22.3 255 336-632 7-262 (307)
41 3kul_A Ephrin type-A receptor 100.0 8.5E-43 2.9E-47 356.4 16.2 261 336-632 48-312 (325)
42 3tt0_A Basic fibroblast growth 100.0 3.3E-42 1.1E-46 360.2 21.1 265 334-631 66-350 (382)
43 2yab_A Death-associated protei 100.0 5.2E-42 1.8E-46 354.4 22.2 258 336-626 11-272 (361)
44 3poz_A Epidermal growth factor 100.0 7.1E-43 2.4E-47 357.5 15.3 260 335-632 13-277 (327)
45 3ugc_A Tyrosine-protein kinase 100.0 2.1E-42 7E-47 348.9 17.9 267 336-632 9-290 (295)
46 3q4u_A Activin receptor type-1 100.0 3.1E-42 1.1E-46 348.6 19.2 265 336-631 7-300 (301)
47 1o6l_A RAC-beta serine/threoni 100.0 1.2E-41 4.3E-46 348.4 23.4 251 336-626 4-260 (337)
48 2ivs_A Proto-oncogene tyrosine 100.0 1.5E-42 5E-47 353.2 16.4 266 333-631 19-309 (314)
49 1t46_A HOMO sapiens V-KIT hard 100.0 7.5E-42 2.6E-46 347.8 21.4 267 333-631 19-305 (313)
50 3op5_A Serine/threonine-protei 100.0 4.4E-42 1.5E-46 357.1 19.4 280 335-631 33-327 (364)
51 3tki_A Serine/threonine-protei 100.0 2.1E-42 7.3E-47 353.0 16.6 255 336-626 6-261 (323)
52 3gen_A Tyrosine-protein kinase 100.0 1.4E-42 4.9E-47 347.9 15.0 258 333-631 20-278 (283)
53 3kmu_A ILK, integrin-linked ki 100.0 1.6E-41 5.6E-46 337.7 22.2 255 336-633 9-270 (271)
54 3qup_A Tyrosine-protein kinase 100.0 2.7E-42 9.1E-47 352.8 16.8 266 334-631 20-296 (323)
55 1rjb_A FL cytokine receptor; k 100.0 7.2E-42 2.5E-46 352.9 19.9 267 333-631 41-332 (344)
56 3soa_A Calcium/calmodulin-depe 100.0 1.9E-41 6.4E-46 359.4 23.5 255 336-626 10-267 (444)
57 2izr_A Casein kinase I isoform 100.0 6.7E-42 2.3E-46 350.9 19.4 261 336-631 8-279 (330)
58 3niz_A Rhodanese family protei 100.0 4.2E-42 1.4E-46 349.0 17.8 264 336-626 20-300 (311)
59 2c30_A Serine/threonine-protei 100.0 2.5E-41 8.6E-46 344.8 23.4 249 338-626 46-294 (321)
60 2bdw_A Hypothetical protein K1 100.0 1.3E-41 4.4E-46 352.4 21.4 254 336-626 28-284 (362)
61 1csn_A Casein kinase-1; phosph 100.0 3.3E-41 1.1E-45 340.6 23.5 262 336-631 9-281 (298)
62 1tki_A Titin; serine kinase, m 100.0 1.1E-41 3.8E-46 347.2 20.1 252 336-626 4-257 (321)
63 3uc3_A Serine/threonine-protei 100.0 7.1E-42 2.4E-46 354.4 18.8 256 333-626 16-274 (361)
64 1opk_A P150, C-ABL, proto-onco 100.0 2.4E-42 8.4E-47 372.7 16.0 259 334-631 217-476 (495)
65 3og7_A AKAP9-BRAF fusion prote 100.0 6.2E-42 2.1E-46 344.3 17.8 263 335-632 22-287 (289)
66 3c0i_A Peripheral plasma membr 100.0 8.5E-42 2.9E-46 352.7 19.2 261 336-626 23-286 (351)
67 3dtc_A Mitogen-activated prote 100.0 7.9E-42 2.7E-46 340.2 18.3 258 336-631 6-271 (271)
68 1k9a_A Carboxyl-terminal SRC k 100.0 7.2E-42 2.5E-46 365.0 19.0 253 334-632 190-444 (450)
69 1qcf_A Haematopoetic cell kina 100.0 2E-42 6.9E-47 369.9 14.6 258 333-631 184-442 (454)
70 2y0a_A Death-associated protei 100.0 2.1E-41 7E-46 346.3 21.2 258 336-626 10-271 (326)
71 4dc2_A Protein kinase C IOTA t 100.0 1.6E-41 5.5E-46 353.8 20.7 253 336-621 51-307 (396)
72 3txo_A PKC-L, NPKC-ETA, protei 100.0 7.1E-42 2.4E-46 352.5 17.8 251 336-626 22-280 (353)
73 4f0f_A Serine/threonine-protei 100.0 4.1E-41 1.4E-45 338.0 22.6 261 336-631 18-287 (287)
74 1ob3_A PFPK5, cell division co 100.0 6.9E-42 2.3E-46 343.8 16.7 263 337-626 2-280 (288)
75 1fot_A TPK1 delta, CAMP-depend 100.0 3.1E-41 1.1E-45 342.9 21.7 248 336-626 5-258 (318)
76 1mp8_A Focal adhesion kinase 1 100.0 6.3E-42 2.2E-46 342.8 16.0 260 334-631 12-274 (281)
77 4fr4_A YANK1, serine/threonine 100.0 1.6E-41 5.6E-46 352.6 19.7 253 336-625 14-270 (384)
78 2wqm_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 342.5 21.2 266 336-632 31-296 (310)
79 3a8x_A Protein kinase C IOTA t 100.0 5.2E-41 1.8E-45 345.3 22.6 253 336-621 8-264 (345)
80 2pvf_A Fibroblast growth facto 100.0 1E-41 3.5E-46 350.1 17.2 265 334-631 32-316 (334)
81 3o0g_A Cell division protein k 100.0 2.1E-41 7.3E-46 340.9 19.1 265 337-626 2-282 (292)
82 3lzb_A Epidermal growth factor 100.0 1E-41 3.4E-46 348.7 16.8 260 335-632 13-277 (327)
83 3t9t_A Tyrosine-protein kinase 100.0 4.8E-42 1.6E-46 340.9 14.0 257 335-632 6-263 (267)
84 2pmi_A Negative RE, cyclin-dep 100.0 1.5E-41 5E-46 346.1 17.8 267 336-626 4-293 (317)
85 3kex_A Receptor tyrosine-prote 100.0 1.2E-41 4E-46 348.2 17.1 260 335-632 11-275 (325)
86 3kn6_A Ribosomal protein S6 ki 100.0 7.6E-42 2.6E-46 349.2 15.5 251 342-626 16-270 (325)
87 2xir_A Vascular endothelial gr 100.0 2.5E-41 8.5E-46 344.5 19.3 268 333-632 23-309 (316)
88 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.1E-42 2.4E-46 349.8 15.3 250 336-626 8-258 (336)
89 2i1m_A Macrophage colony-stimu 100.0 1.5E-41 5E-46 348.9 17.5 267 333-631 42-324 (333)
90 3kfa_A Tyrosine-protein kinase 100.0 8.4E-42 2.9E-46 343.1 15.4 260 333-631 9-269 (288)
91 3brb_A Proto-oncogene tyrosine 100.0 2E-41 6.8E-46 344.8 18.3 268 333-632 30-307 (313)
92 4e5w_A Tyrosine-protein kinase 100.0 2.7E-41 9.4E-46 341.9 18.2 269 336-633 20-302 (302)
93 3v8s_A RHO-associated protein 100.0 9.2E-42 3.2E-46 357.6 15.1 259 333-626 65-329 (410)
94 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.7E-41 2.3E-45 348.4 21.4 256 334-631 62-337 (365)
95 1rdq_E PKA C-alpha, CAMP-depen 100.0 3E-41 1E-45 347.6 18.5 248 336-626 40-293 (350)
96 2zv2_A Calcium/calmodulin-depe 100.0 4.9E-41 1.7E-45 339.3 19.8 264 336-626 12-292 (298)
97 4aw2_A Serine/threonine-protei 100.0 1.5E-41 5.1E-46 358.8 16.5 261 334-626 71-338 (437)
98 1xjd_A Protein kinase C, theta 100.0 3.1E-41 1E-45 346.4 18.3 252 335-625 15-268 (345)
99 3qd2_B Eukaryotic translation 100.0 2.3E-41 7.8E-46 347.2 17.1 254 336-626 5-325 (332)
100 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 8.8E-42 3E-46 364.5 14.3 258 333-631 180-438 (452)
101 2w4o_A Calcium/calmodulin-depe 100.0 5.2E-41 1.8E-45 346.4 19.5 251 336-626 52-305 (349)
102 4eut_A Serine/threonine-protei 100.0 2.5E-41 8.7E-46 355.1 17.4 272 336-631 8-307 (396)
103 3ork_A Serine/threonine protei 100.0 2.9E-41 9.8E-46 343.1 17.2 261 336-629 11-277 (311)
104 2v62_A Serine/threonine-protei 100.0 4.4E-41 1.5E-45 346.8 18.2 278 336-631 36-326 (345)
105 3p1a_A MYT1 kinase, membrane-a 100.0 1.3E-40 4.4E-45 338.2 21.2 247 337-626 57-304 (311)
106 1p4o_A Insulin-like growth fac 100.0 1.3E-41 4.4E-46 347.6 14.0 266 333-631 21-297 (322)
107 1kob_A Twitchin; kinase, intra 100.0 1E-40 3.5E-45 347.8 21.0 253 336-626 50-304 (387)
108 4agu_A Cyclin-dependent kinase 100.0 3.6E-41 1.2E-45 342.5 17.1 264 337-626 3-284 (311)
109 3gni_B Strad alpha; kinase fol 100.0 5.1E-41 1.7E-45 352.4 18.8 211 333-561 21-240 (389)
110 2i0e_A Protein kinase C-beta I 100.0 7.5E-41 2.6E-45 344.6 19.6 247 335-621 18-266 (353)
111 1qpc_A LCK kinase; alpha beta 100.0 2E-41 6.8E-46 338.8 14.9 258 333-631 9-267 (279)
112 3mdy_A Bone morphogenetic prot 100.0 2E-40 6.8E-45 341.0 22.6 266 336-632 36-330 (337)
113 3dbq_A Dual specificity protei 100.0 5.3E-41 1.8E-45 346.0 18.2 253 336-626 8-273 (343)
114 2h34_A Serine/threonine-protei 100.0 2.1E-40 7.3E-45 336.3 22.2 261 336-631 33-294 (309)
115 3is5_A Calcium-dependent prote 100.0 6.9E-41 2.4E-45 335.9 18.3 255 336-626 21-278 (285)
116 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-41 3.8E-46 347.3 12.6 264 338-632 32-309 (318)
117 3cc6_A Protein tyrosine kinase 100.0 3.6E-41 1.2E-45 337.3 15.9 260 335-632 10-272 (281)
118 3kk8_A Calcium/calmodulin depe 100.0 2.1E-40 7.3E-45 332.2 21.6 254 336-626 5-261 (284)
119 4fvq_A Tyrosine-protein kinase 100.0 1.6E-41 5.3E-46 341.4 13.3 252 336-631 7-273 (289)
120 4hgt_A Casein kinase I isoform 100.0 1.5E-40 5E-45 335.4 20.4 262 336-631 8-278 (296)
121 3c1x_A Hepatocyte growth facto 100.0 3.6E-41 1.2E-45 350.2 16.3 260 336-631 88-353 (373)
122 2vd5_A DMPK protein; serine/th 100.0 3.8E-41 1.3E-45 353.2 16.5 260 334-626 58-327 (412)
123 3pls_A Macrophage-stimulating 100.0 2E-40 6.9E-45 334.8 21.2 264 334-632 18-286 (298)
124 2a2a_A Death-associated protei 100.0 1.4E-40 4.8E-45 339.6 20.3 258 336-626 11-272 (321)
125 2r5t_A Serine/threonine-protei 100.0 4.6E-41 1.6E-45 348.6 16.9 253 336-627 37-290 (373)
126 3gxj_A TGF-beta receptor type- 100.0 1.7E-42 5.7E-47 350.9 5.9 265 337-633 3-297 (303)
127 3lxl_A Tyrosine-protein kinase 100.0 1E-41 3.6E-46 349.0 11.7 267 335-631 21-301 (327)
128 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.1E-40 3.7E-45 359.7 20.1 254 336-621 184-438 (543)
129 1nxk_A MAP kinase-activated pr 100.0 1.3E-40 4.5E-45 349.5 20.2 253 336-626 60-321 (400)
130 1u5q_A Serine/threonine protei 100.0 1.1E-40 3.7E-45 343.6 19.2 250 336-626 53-305 (348)
131 2zmd_A Dual specificity protei 100.0 1.2E-40 4.3E-45 348.6 20.0 253 336-626 55-320 (390)
132 3a62_A Ribosomal protein S6 ki 100.0 1.2E-40 4E-45 340.8 19.2 253 336-626 16-276 (327)
133 2buj_A Serine/threonine-protei 100.0 3.9E-41 1.3E-45 343.2 15.6 265 335-632 27-305 (317)
134 3uzp_A CKI-delta, CKID, casein 100.0 4.8E-40 1.6E-44 331.7 23.4 262 336-631 8-278 (296)
135 2eue_A Carbon catabolite derep 100.0 1.7E-40 6E-45 331.2 19.9 250 336-626 12-262 (275)
136 3f66_A Hepatocyte growth facto 100.0 9.1E-41 3.1E-45 337.4 18.1 263 333-631 21-289 (298)
137 2y94_A 5'-AMP-activated protei 100.0 1.7E-40 5.7E-45 354.3 21.0 250 336-626 15-266 (476)
138 2acx_A G protein-coupled recep 100.0 7.2E-41 2.4E-45 361.7 18.4 258 335-626 182-444 (576)
139 3fdn_A Serine/threonine-protei 100.0 2E-40 6.8E-45 331.5 20.2 251 335-626 7-257 (279)
140 3oz6_A Mitogen-activated prote 100.0 6.4E-41 2.2E-45 351.4 17.4 204 336-561 8-234 (388)
141 1mqb_A Ephrin type-A receptor 100.0 7.9E-41 2.7E-45 343.1 17.6 261 335-631 42-307 (333)
142 3dls_A PAS domain-containing s 100.0 3.5E-41 1.2E-45 345.7 14.9 251 336-627 23-275 (335)
143 2yfx_A Tyrosine-protein kinase 100.0 1.3E-40 4.4E-45 340.9 19.0 265 335-632 28-303 (327)
144 2x4f_A Myosin light chain kina 100.0 1.9E-40 6.5E-45 344.9 20.5 249 340-626 92-342 (373)
145 3ttj_A Mitogen-activated prote 100.0 1.8E-40 6.3E-45 354.6 20.9 261 336-626 61-355 (464)
146 3g33_A Cell division protein k 100.0 3.5E-41 1.2E-45 342.1 14.5 268 336-626 8-296 (308)
147 2a19_B Interferon-induced, dou 100.0 9.1E-41 3.1E-45 334.8 17.1 249 336-633 10-274 (284)
148 1b6c_B TGF-B superfamily recep 100.0 1.6E-40 5.3E-45 342.6 19.2 266 336-632 41-335 (342)
149 1xbb_A Tyrosine-protein kinase 100.0 2.4E-40 8.3E-45 333.0 19.8 260 335-631 14-277 (291)
150 1byg_A CSK, protein (C-termina 100.0 3.8E-41 1.3E-45 336.5 13.4 252 335-632 19-272 (278)
151 4ejn_A RAC-alpha serine/threon 100.0 1.8E-40 6.3E-45 354.2 19.2 253 336-626 147-404 (446)
152 3llt_A Serine/threonine kinase 100.0 5E-40 1.7E-44 341.3 21.6 259 336-626 34-355 (360)
153 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.2E-40 4.1E-45 341.2 16.5 261 335-626 32-318 (329)
154 2yex_A Serine/threonine-protei 100.0 2.2E-40 7.6E-45 330.6 18.0 255 336-626 6-261 (276)
155 3f3z_A Calcium/calmodulin-depe 100.0 4.9E-40 1.7E-44 328.3 20.4 251 336-626 8-261 (277)
156 1u59_A Tyrosine-protein kinase 100.0 9.3E-41 3.2E-45 335.3 15.2 259 336-631 8-270 (287)
157 3g2f_A Bone morphogenetic prot 100.0 1.4E-40 4.9E-45 341.9 16.9 268 336-631 12-316 (336)
158 2w1i_A JAK2; chromosomal rearr 100.0 1.9E-40 6.4E-45 339.5 17.7 267 336-632 40-321 (326)
159 2h8h_A Proto-oncogene tyrosine 100.0 2.7E-41 9.2E-46 367.9 11.9 258 333-631 263-521 (535)
160 3hko_A Calcium/calmodulin-depe 100.0 2E-40 6.7E-45 342.3 17.6 267 333-626 22-330 (345)
161 2w5a_A Serine/threonine-protei 100.0 3.8E-41 1.3E-45 336.7 11.8 262 336-629 5-270 (279)
162 3fme_A Dual specificity mitoge 100.0 2.4E-40 8.1E-45 332.9 17.6 257 335-626 5-266 (290)
163 4aaa_A Cyclin-dependent kinase 100.0 7.7E-41 2.6E-45 343.1 14.2 266 335-626 23-306 (331)
164 1cm8_A Phosphorylated MAP kina 100.0 8E-40 2.7E-44 339.8 21.7 259 336-626 24-307 (367)
165 3rp9_A Mitogen-activated prote 100.0 4.4E-40 1.5E-44 352.8 20.3 198 336-554 52-280 (458)
166 3bhy_A Death-associated protei 100.0 4.9E-40 1.7E-44 329.4 19.3 257 337-626 5-265 (283)
167 3mtl_A Cell division protein k 100.0 4.5E-41 1.5E-45 343.6 12.0 263 337-626 2-281 (324)
168 3n9x_A Phosphotransferase; mal 100.0 1.1E-39 3.6E-44 346.5 22.9 203 336-559 25-253 (432)
169 3eqc_A Dual specificity mitoge 100.0 2.6E-40 9E-45 343.4 17.7 202 336-561 32-233 (360)
170 1u46_A ACK-1, activated CDC42 100.0 2.3E-40 7.8E-45 333.2 16.7 264 335-632 16-283 (291)
171 2qr7_A Ribosomal protein S6 ki 100.0 1.3E-40 4.4E-45 341.9 15.0 252 336-626 21-277 (342)
172 2ozo_A Tyrosine-protein kinase 100.0 2.2E-40 7.4E-45 365.9 17.7 258 337-631 335-596 (613)
173 1t4h_A Serine/threonine-protei 100.0 1.2E-39 4E-44 327.9 21.2 251 336-626 25-282 (290)
174 3sv0_A Casein kinase I-like; t 100.0 1.5E-39 5E-44 347.7 23.2 262 336-631 6-276 (483)
175 3cok_A Serine/threonine-protei 100.0 3.2E-40 1.1E-44 329.8 17.0 254 335-626 9-262 (278)
176 2y7j_A Phosphorylase B kinase 100.0 1.6E-39 5.6E-44 337.3 22.7 260 336-626 93-359 (365)
177 2jii_A Serine/threonine-protei 100.0 2.1E-40 7.1E-45 342.9 15.7 264 336-631 41-334 (352)
178 4fl3_A Tyrosine-protein kinase 100.0 1.5E-40 5.1E-45 368.0 15.4 252 343-631 375-629 (635)
179 3i6u_A CDS1, serine/threonine- 100.0 3.5E-40 1.2E-44 348.7 17.5 261 335-626 133-399 (419)
180 1fvr_A Tyrosine-protein kinase 100.0 1.2E-40 4E-45 341.2 13.5 259 336-631 24-298 (327)
181 3nsz_A CK II alpha, casein kin 100.0 9E-40 3.1E-44 335.1 19.9 258 336-626 35-319 (330)
182 2ac3_A MAP kinase-interacting 100.0 1.1E-39 3.9E-44 332.2 20.4 262 336-626 11-295 (316)
183 2vgo_A Serine/threonine-protei 100.0 1.3E-39 4.3E-44 326.6 20.3 250 336-626 13-262 (284)
184 2rku_A Serine/threonine-protei 100.0 1.2E-39 4.1E-44 328.5 20.1 252 335-626 13-265 (294)
185 2vwi_A Serine/threonine-protei 100.0 3.6E-40 1.2E-44 333.7 16.3 269 333-626 11-287 (303)
186 2owb_A Serine/threonine-protei 100.0 1E-39 3.6E-44 335.1 19.7 253 335-626 39-291 (335)
187 3byv_A Rhoptry kinase; malaria 100.0 5.7E-41 1.9E-45 350.3 10.3 248 335-626 71-359 (377)
188 3eb0_A Putative uncharacterize 100.0 1.8E-40 6.3E-45 347.2 14.2 262 335-626 5-321 (383)
189 3a7i_A MST3 kinase, serine/thr 100.0 6.2E-40 2.1E-44 332.1 17.3 252 335-627 20-271 (303)
190 1x8b_A WEE1HU, WEE1-like prote 100.0 3.2E-40 1.1E-44 331.5 14.6 249 336-626 10-279 (289)
191 1vzo_A Ribosomal protein S6 ki 100.0 2.4E-40 8.3E-45 342.4 13.9 260 336-627 53-322 (355)
192 3mi9_A Cell division protein k 100.0 9.4E-40 3.2E-44 338.0 18.3 270 333-626 13-311 (351)
193 3an0_A Dual specificity mitoge 100.0 7.1E-40 2.4E-44 337.3 17.1 257 334-626 48-310 (340)
194 3lij_A Calcium/calmodulin depe 100.0 1.9E-39 6.6E-44 350.8 21.2 253 336-626 36-291 (494)
195 3com_A Serine/threonine-protei 100.0 2.6E-39 8.9E-44 329.3 20.8 252 335-626 27-278 (314)
196 1ua2_A CAK, cell division prot 100.0 4.1E-40 1.4E-44 339.8 14.7 269 335-626 8-291 (346)
197 3mwu_A Calmodulin-domain prote 100.0 1.7E-39 5.9E-44 350.6 20.2 253 336-626 21-276 (486)
198 1j1b_A Glycogen synthase kinas 100.0 2.4E-40 8.2E-45 350.0 12.9 261 336-626 53-336 (420)
199 2jam_A Calcium/calmodulin-depe 100.0 2.2E-39 7.6E-44 328.2 19.4 251 336-626 8-261 (304)
200 3q5i_A Protein kinase; CDPK, m 100.0 2.7E-39 9.2E-44 350.6 21.4 264 336-626 35-301 (504)
201 3ll6_A Cyclin G-associated kin 100.0 5.4E-40 1.8E-44 337.7 15.1 258 335-632 26-307 (337)
202 3nyv_A Calmodulin-domain prote 100.0 1.6E-39 5.5E-44 351.0 19.2 254 336-626 25-281 (484)
203 2h6d_A 5'-AMP-activated protei 100.0 2E-39 6.9E-44 323.7 18.4 250 336-626 10-261 (276)
204 2fst_X Mitogen-activated prote 100.0 2.5E-39 8.4E-44 335.8 19.8 259 336-626 28-311 (367)
205 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.6E-40 1.2E-44 336.4 13.0 261 333-632 29-301 (319)
206 2clq_A Mitogen-activated prote 100.0 5.7E-39 1.9E-43 323.7 21.6 255 336-626 21-278 (295)
207 3qyz_A Mitogen-activated prote 100.0 7.6E-39 2.6E-43 332.7 23.1 260 336-626 26-313 (364)
208 2r3i_A Cell division protein k 100.0 1.5E-39 5E-44 328.6 17.2 266 337-626 3-283 (299)
209 3pfq_A PKC-B, PKC-beta, protei 100.0 2.2E-39 7.6E-44 361.0 20.3 247 335-621 339-587 (674)
210 3kvw_A DYRK2, dual specificity 100.0 2.5E-39 8.7E-44 342.9 19.5 199 336-561 96-302 (429)
211 1phk_A Phosphorylase kinase; g 100.0 8.8E-39 3E-43 322.8 22.5 261 336-626 16-283 (298)
212 3lm5_A Serine/threonine-protei 100.0 5.4E-40 1.8E-44 336.1 13.4 256 336-626 27-287 (327)
213 2xrw_A Mitogen-activated prote 100.0 6.2E-39 2.1E-43 334.0 21.4 261 336-626 24-318 (371)
214 2ycf_A Serine/threonine-protei 100.0 2.6E-39 9E-44 330.4 18.0 260 336-626 9-274 (322)
215 2wtk_C Serine/threonine-protei 100.0 3E-39 1E-43 327.3 18.3 255 337-626 5-263 (305)
216 2j7t_A Serine/threonine-protei 100.0 1.8E-39 6.3E-44 328.4 16.2 255 334-626 16-275 (302)
217 1wak_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 338.1 20.4 263 336-626 36-391 (397)
218 4exu_A Mitogen-activated prote 100.0 1.2E-38 4E-43 331.9 22.6 258 336-626 41-323 (371)
219 3e3p_A Protein kinase, putativ 100.0 5.9E-39 2E-43 333.2 20.3 268 333-626 19-314 (360)
220 1z57_A Dual specificity protei 100.0 7.5E-39 2.5E-43 329.4 20.9 266 336-632 13-336 (339)
221 2x7f_A TRAF2 and NCK-interacti 100.0 4.8E-39 1.6E-43 329.1 18.8 255 333-626 20-286 (326)
222 4e7w_A Glycogen synthase kinas 100.0 8.9E-40 3E-44 342.8 13.3 260 336-626 39-321 (394)
223 3q60_A ROP5B; pseudokinase, tr 100.0 1.4E-39 4.8E-44 339.1 14.6 257 336-626 61-352 (371)
224 1blx_A Cyclin-dependent kinase 100.0 1.1E-39 3.6E-44 334.0 13.3 269 333-626 7-296 (326)
225 2j0j_A Focal adhesion kinase 1 100.0 2.5E-39 8.4E-44 359.6 17.2 260 334-631 387-649 (656)
226 3rgf_A Cyclin-dependent kinase 100.0 5.2E-39 1.8E-43 338.8 17.1 205 337-561 20-239 (405)
227 2vx3_A Dual specificity tyrosi 100.0 3.6E-38 1.2E-42 329.7 23.2 201 336-561 53-261 (382)
228 3cek_A Dual specificity protei 100.0 9.2E-39 3.1E-43 325.0 18.1 254 335-626 26-292 (313)
229 2wei_A Calmodulin-domain prote 100.0 1.7E-38 5.7E-43 318.9 18.8 253 336-626 21-276 (287)
230 3pg1_A Mitogen-activated prote 100.0 2.3E-38 7.8E-43 329.0 20.4 274 334-626 19-316 (362)
231 2b9h_A MAP kinase FUS3, mitoge 100.0 7.5E-39 2.6E-43 331.5 16.0 264 336-626 10-305 (353)
232 1q8y_A SR protein kinase; tran 100.0 2E-38 6.9E-43 330.9 18.8 262 336-626 18-333 (373)
233 2eu9_A Dual specificity protei 100.0 4.7E-38 1.6E-42 325.7 21.1 260 336-626 18-333 (355)
234 3coi_A Mitogen-activated prote 100.0 3.9E-38 1.3E-42 326.0 19.9 258 336-626 23-305 (353)
235 2i6l_A Mitogen-activated prote 100.0 2.9E-38 9.8E-43 322.3 17.8 263 336-626 10-305 (320)
236 2pml_X PFPK7, Ser/Thr protein 100.0 1.7E-38 5.9E-43 328.1 16.1 276 336-626 30-322 (348)
237 3fhr_A MAP kinase-activated pr 100.0 2.2E-38 7.4E-43 325.3 16.2 253 336-626 27-287 (336)
238 3aln_A Dual specificity mitoge 100.0 1.8E-38 6E-43 325.1 15.1 260 334-626 19-285 (327)
239 1zy4_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 318.1 17.6 253 336-626 5-283 (303)
240 2rio_A Serine/threonine-protei 100.0 2.4E-38 8.3E-43 336.1 15.2 254 337-626 15-295 (434)
241 2iwi_A Serine/threonine-protei 100.0 3E-38 1E-42 321.1 15.0 247 336-626 30-283 (312)
242 2dyl_A Dual specificity mitoge 100.0 6.8E-38 2.3E-42 319.3 17.5 257 333-626 21-283 (318)
243 3a99_A Proto-oncogene serine/t 100.0 1.3E-38 4.4E-43 324.8 12.1 247 336-626 42-293 (320)
244 3qa8_A MGC80376 protein; kinas 100.0 6.5E-38 2.2E-42 341.7 13.7 269 336-631 13-307 (676)
245 3p23_A Serine/threonine-protei 100.0 9.9E-38 3.4E-42 330.4 13.8 251 335-626 22-283 (432)
246 2pzi_A Probable serine/threoni 100.0 5.4E-37 1.9E-41 344.2 15.2 241 336-630 79-325 (681)
247 3uqc_A Probable conserved tran 100.0 1.7E-36 5.9E-41 303.4 17.1 234 337-632 31-264 (286)
248 3dzo_A Rhoptry kinase domain; 100.0 8.4E-37 2.9E-41 322.1 9.9 247 336-626 77-363 (413)
249 3m2w_A MAP kinase-activated pr 100.0 7.1E-36 2.4E-40 301.6 14.9 232 336-626 16-256 (299)
250 2vuw_A Serine/threonine-protei 100.0 2.3E-36 7.7E-41 310.5 3.3 250 336-625 19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 2.2E-30 7.6E-35 282.3 4.8 196 344-557 241-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 9.3E-28 3.2E-32 260.3 7.3 193 341-559 340-539 (540)
253 1ogq_A PGIP-2, polygalacturona 99.9 7.6E-26 2.6E-30 229.3 14.4 178 27-209 2-190 (313)
254 3e6j_A Variable lymphocyte rec 99.9 3.2E-22 1.1E-26 192.8 15.1 162 48-209 12-175 (229)
255 4ecn_A Leucine-rich repeat pro 99.9 2.9E-23 9.9E-28 235.2 9.0 175 27-210 265-565 (876)
256 1zar_A RIO2 kinase; serine kin 99.9 3.9E-23 1.3E-27 205.3 8.1 161 336-532 89-253 (282)
257 4eco_A Uncharacterized protein 99.9 1.8E-22 6.1E-27 224.5 10.8 172 30-210 29-322 (636)
258 3rgz_A Protein brassinosteroid 99.9 1.2E-21 4E-26 223.0 11.7 173 24-207 5-214 (768)
259 4fcg_A Uncharacterized protein 99.8 4E-21 1.4E-25 195.7 13.4 180 27-210 23-223 (328)
260 2v9t_B SLIT homolog 2 protein 99.8 4.9E-21 1.7E-25 183.2 13.2 154 55-208 11-167 (220)
261 2o6s_A Variable lymphocyte rec 99.8 1.6E-20 5.6E-25 178.2 15.5 155 54-208 6-163 (208)
262 2v70_A SLIT-2, SLIT homolog 2 99.8 9.5E-21 3.3E-25 181.2 13.1 154 55-208 11-168 (220)
263 3m19_A Variable lymphocyte rec 99.8 5.8E-20 2E-24 179.8 17.2 139 73-211 34-173 (251)
264 2o6q_A Variable lymphocyte rec 99.8 1.6E-19 5.4E-24 178.8 16.5 158 73-238 36-194 (270)
265 3m19_A Variable lymphocyte rec 99.8 9.1E-19 3.1E-23 171.2 15.1 136 73-208 58-194 (251)
266 3oja_A Leucine-rich immune mol 99.8 1.1E-20 3.6E-25 203.1 1.1 132 74-210 99-231 (487)
267 4g8a_A TOLL-like receptor 4; l 99.8 3.7E-19 1.3E-23 198.4 13.1 154 59-212 35-192 (635)
268 2ell_A Acidic leucine-rich nuc 99.8 6.4E-19 2.2E-23 161.0 10.4 134 75-210 25-164 (168)
269 1zth_A RIO1 serine protein kin 99.8 5.9E-19 2E-23 173.1 10.7 152 339-506 49-219 (258)
270 2xwt_C Thyrotropin receptor; s 99.8 1.6E-18 5.4E-23 168.2 12.4 150 60-211 18-174 (239)
271 2xot_A Amphoterin-induced prot 99.8 1.3E-18 4.6E-23 179.6 12.6 157 55-211 18-181 (361)
272 1ozn_A Reticulon 4 receptor; N 99.8 5.3E-18 1.8E-22 169.2 16.3 153 59-211 15-171 (285)
273 3rgz_A Protein brassinosteroid 99.8 9.1E-19 3.1E-23 199.2 12.1 84 122-205 632-716 (768)
274 2z62_A TOLL-like receptor 4, v 99.8 3.3E-18 1.1E-22 169.8 14.6 153 59-211 11-167 (276)
275 1p9a_G Platelet glycoprotein I 99.8 7E-18 2.4E-22 168.5 16.6 171 57-238 12-185 (290)
276 3rfs_A Internalin B, repeat mo 99.8 5.7E-18 1.9E-22 167.7 15.8 135 74-210 63-198 (272)
277 2o6q_A Variable lymphocyte rec 99.8 9E-18 3.1E-22 166.1 17.0 139 73-211 60-199 (270)
278 1w8a_A SLIT protein; signaling 99.8 2.9E-18 1E-22 160.2 12.5 129 77-208 11-141 (192)
279 1ogq_A PGIP-2, polygalacturona 99.8 1.1E-18 3.7E-23 176.6 10.0 133 74-206 125-281 (313)
280 3rfs_A Internalin B, repeat mo 99.8 9.3E-18 3.2E-22 166.1 16.2 135 74-208 85-220 (272)
281 2z80_A TOLL-like receptor 2, v 99.8 1.7E-18 5.8E-23 178.5 11.3 158 52-210 27-191 (353)
282 4fcg_A Uncharacterized protein 99.7 6.9E-18 2.4E-22 171.7 13.5 133 73-208 103-244 (328)
283 2v9t_B SLIT homolog 2 protein 99.7 9.6E-18 3.3E-22 160.3 13.7 132 77-211 14-146 (220)
284 2je0_A Acidic leucine-rich nuc 99.7 2.8E-18 9.6E-23 153.3 9.2 127 74-202 17-149 (149)
285 1p9a_G Platelet glycoprotein I 99.7 1.1E-17 3.9E-22 166.9 14.6 137 74-213 55-192 (290)
286 3zyj_A Leucine-rich repeat-con 99.7 1.3E-17 4.4E-22 177.2 15.5 153 57-209 45-201 (440)
287 3vq2_A TLR4, TOLL-like recepto 99.7 7.3E-18 2.5E-22 187.0 14.2 159 53-211 5-171 (606)
288 3v47_A TOLL-like receptor 5B a 99.7 7.2E-18 2.5E-22 180.1 12.6 159 53-211 6-172 (455)
289 3zyi_A Leucine-rich repeat-con 99.7 2.2E-17 7.7E-22 176.0 15.8 153 57-209 56-212 (452)
290 1w8a_A SLIT protein; signaling 99.7 1.8E-17 6.2E-22 154.7 13.0 133 54-186 7-143 (192)
291 1ozn_A Reticulon 4 receptor; N 99.7 2E-17 6.8E-22 165.0 14.1 159 73-239 55-215 (285)
292 3e6j_A Variable lymphocyte rec 99.7 6.5E-17 2.2E-21 155.5 17.0 133 75-211 20-153 (229)
293 2z66_A Variable lymphocyte rec 99.7 7.5E-18 2.6E-22 170.0 10.8 153 54-207 6-164 (306)
294 2wfh_A SLIT homolog 2 protein 99.7 2.6E-17 8.8E-22 153.7 13.3 128 77-208 13-141 (193)
295 2v70_A SLIT-2, SLIT homolog 2 99.7 3E-17 1E-21 156.8 13.6 133 76-211 13-147 (220)
296 2z81_A CD282 antigen, TOLL-lik 99.7 8.5E-18 2.9E-22 184.1 10.4 156 54-210 3-165 (549)
297 2id5_A Lingo-1, leucine rich r 99.7 3E-17 1E-21 176.4 12.8 155 57-211 13-170 (477)
298 2o6r_A Variable lymphocyte rec 99.7 4.3E-17 1.5E-21 150.1 12.0 128 79-209 12-140 (177)
299 2o6r_A Variable lymphocyte rec 99.7 1.1E-16 3.9E-21 147.3 14.4 133 54-186 6-141 (177)
300 3oja_B Anopheles plasmodium-re 99.7 3.8E-17 1.3E-21 180.4 12.5 138 74-211 51-189 (597)
301 2z62_A TOLL-like receptor 4, v 99.7 7.9E-17 2.7E-21 159.9 13.3 139 73-211 51-195 (276)
302 3v47_A TOLL-like receptor 5B a 99.7 4.6E-17 1.6E-21 173.9 12.4 137 74-210 275-412 (455)
303 2ft3_A Biglycan; proteoglycan, 99.7 2E-16 6.8E-21 161.5 16.5 153 55-211 33-190 (332)
304 3o6n_A APL1; leucine-rich repe 99.7 5.7E-17 1.9E-21 169.5 12.6 138 73-210 44-182 (390)
305 2z66_A Variable lymphocyte rec 99.7 3.7E-17 1.3E-21 164.8 10.1 138 74-211 101-241 (306)
306 1xku_A Decorin; proteoglycan, 99.7 1.2E-16 4.1E-21 162.9 13.8 155 54-211 30-189 (330)
307 1wwl_A Monocyte differentiatio 99.7 4E-17 1.4E-21 165.0 9.6 134 75-209 96-244 (312)
308 1ziw_A TOLL-like receptor 3; i 99.7 1.1E-16 3.6E-21 180.1 13.9 157 55-211 4-163 (680)
309 4eco_A Uncharacterized protein 99.7 1.5E-17 5.1E-22 184.9 6.2 140 70-210 202-370 (636)
310 2xot_A Amphoterin-induced prot 99.7 3.7E-17 1.2E-21 168.8 8.6 136 73-208 63-204 (361)
311 2o6s_A Variable lymphocyte rec 99.7 6.8E-16 2.3E-20 146.1 16.6 134 75-211 8-142 (208)
312 2z63_A TOLL-like receptor 4, v 99.7 1.7E-16 5.7E-21 174.6 14.3 153 59-211 11-167 (570)
313 3t6q_A CD180 antigen; protein- 99.7 1E-16 3.5E-21 177.7 12.5 155 57-211 14-171 (606)
314 3zyi_A Leucine-rich repeat-con 99.7 2.8E-16 9.5E-21 167.5 15.3 134 73-208 98-233 (452)
315 1wwl_A Monocyte differentiatio 99.7 8E-17 2.7E-21 162.8 10.3 155 73-239 120-288 (312)
316 4b8c_D Glucose-repressible alc 99.7 2.6E-17 8.8E-22 184.9 7.0 182 27-211 128-334 (727)
317 4gyi_A RIO2 kinase; protein ki 99.7 3.3E-18 1.1E-22 173.9 -0.2 153 337-506 95-265 (397)
318 4ezg_A Putative uncharacterize 99.7 1.1E-16 3.8E-21 150.1 9.2 130 74-209 44-175 (197)
319 3j0a_A TOLL-like receptor 5; m 99.7 2.1E-16 7.2E-21 181.6 13.3 140 72-211 22-166 (844)
320 2wfh_A SLIT homolog 2 protein 99.7 3.3E-16 1.1E-20 146.2 11.8 128 55-183 10-140 (193)
321 4ezg_A Putative uncharacterize 99.7 3.3E-16 1.1E-20 146.9 11.6 130 72-206 64-194 (197)
322 4ecn_A Leucine-rich repeat pro 99.7 7.9E-17 2.7E-21 182.6 8.5 138 71-210 445-612 (876)
323 3zyj_A Leucine-rich repeat-con 99.7 6.7E-16 2.3E-20 163.9 14.8 134 73-208 87-222 (440)
324 3oja_B Anopheles plasmodium-re 99.7 6.1E-16 2.1E-20 170.8 15.0 110 74-183 75-185 (597)
325 4g8a_A TOLL-like receptor 4; l 99.6 3.7E-16 1.3E-20 174.1 12.7 131 78-211 35-166 (635)
326 1a9n_A U2A', U2A'; complex (nu 99.6 1.3E-16 4.5E-21 146.7 7.4 128 75-207 20-154 (176)
327 4glp_A Monocyte differentiatio 99.6 1.9E-16 6.4E-21 160.0 8.2 133 75-208 92-239 (310)
328 2id5_A Lingo-1, leucine rich r 99.6 4.6E-16 1.6E-20 167.1 11.2 138 73-210 55-193 (477)
329 1h6u_A Internalin H; cell adhe 99.6 1.5E-15 5E-20 153.1 14.1 127 74-209 63-189 (308)
330 1h6t_A Internalin B; cell adhe 99.6 9.7E-16 3.3E-20 153.0 12.3 128 73-209 67-194 (291)
331 2z7x_B TOLL-like receptor 1, v 99.6 1.8E-15 6.3E-20 164.3 15.2 136 73-211 323-462 (520)
332 3o6n_A APL1; leucine-rich repe 99.6 2.4E-15 8.3E-20 157.0 15.5 108 74-182 69-178 (390)
333 3vq2_A TLR4, TOLL-like recepto 99.6 6.6E-16 2.3E-20 171.2 11.7 141 73-213 55-201 (606)
334 3t6q_A CD180 antigen; protein- 99.6 1.4E-15 4.7E-20 168.6 14.1 141 73-213 56-199 (606)
335 4glp_A Monocyte differentiatio 99.6 7.4E-16 2.5E-20 155.6 10.9 139 73-211 116-269 (310)
336 2xwt_C Thyrotropin receptor; s 99.6 5.1E-16 1.8E-20 150.4 8.9 158 73-241 54-221 (239)
337 3g39_A Variable lymphocyte rec 99.6 1.8E-15 6E-20 138.1 11.8 105 76-183 11-116 (170)
338 2z80_A TOLL-like receptor 2, v 99.6 3.2E-16 1.1E-20 161.4 7.8 137 73-210 75-215 (353)
339 1xku_A Decorin; proteoglycan, 99.6 2.5E-15 8.6E-20 153.1 14.0 132 73-209 99-232 (330)
340 3o53_A Protein LRIM1, AGAP0063 99.6 5.1E-16 1.8E-20 157.2 8.6 130 75-209 100-230 (317)
341 3oja_A Leucine-rich immune mol 99.6 5.6E-16 1.9E-20 166.3 8.9 126 75-210 81-208 (487)
342 1xeu_A Internalin C; cellular 99.6 2.7E-15 9.2E-20 147.3 13.0 124 75-208 42-165 (263)
343 2r9u_A Variable lymphocyte rec 99.6 2.6E-15 8.8E-20 137.5 12.0 103 77-182 15-118 (174)
344 1h6t_A Internalin B; cell adhe 99.6 4.2E-15 1.4E-19 148.4 14.5 128 74-210 46-173 (291)
345 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 4E-15 1.4E-19 163.2 15.6 135 74-211 353-491 (562)
346 3cvr_A Invasion plasmid antige 99.6 1.7E-15 6E-20 164.0 11.8 133 51-210 39-177 (571)
347 1xeu_A Internalin C; cellular 99.6 1.4E-15 4.9E-20 149.4 9.9 129 73-211 62-190 (263)
348 1h6u_A Internalin H; cell adhe 99.6 3.9E-15 1.3E-19 149.9 13.3 128 73-209 84-211 (308)
349 1m9s_A Internalin B; cell inva 99.6 3.3E-15 1.1E-19 163.6 13.6 128 73-209 64-191 (605)
350 2z7x_B TOLL-like receptor 1, v 99.6 2.1E-15 7.3E-20 163.8 11.5 125 78-207 4-129 (520)
351 2ft3_A Biglycan; proteoglycan, 99.6 4.5E-15 1.5E-19 151.4 12.6 132 74-209 102-257 (332)
352 4ay9_X Follicle-stimulating ho 99.6 3.3E-15 1.1E-19 153.4 11.6 187 55-241 9-218 (350)
353 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 6.6E-15 2.3E-19 161.4 14.1 133 95-238 350-486 (562)
354 2je0_A Acidic leucine-rich nuc 99.6 1.9E-15 6.6E-20 134.7 7.8 113 96-210 15-130 (149)
355 3o53_A Protein LRIM1, AGAP0063 99.6 2.3E-15 8E-20 152.4 9.3 126 75-210 81-208 (317)
356 2z63_A TOLL-like receptor 4, v 99.6 3.7E-15 1.3E-19 163.8 11.4 140 73-212 51-196 (570)
357 1dce_A Protein (RAB geranylger 99.6 4.5E-15 1.5E-19 161.5 11.8 108 99-210 442-550 (567)
358 1dce_A Protein (RAB geranylger 99.6 6.1E-16 2.1E-20 168.4 4.9 121 75-200 442-567 (567)
359 1ziw_A TOLL-like receptor 3; i 99.6 1.1E-14 3.8E-19 163.6 14.6 164 75-238 382-549 (680)
360 2z81_A CD282 antigen, TOLL-lik 99.6 1.8E-15 6.2E-20 165.5 7.8 137 73-209 49-188 (549)
361 4b8c_D Glucose-repressible alc 99.6 6.5E-16 2.2E-20 173.5 4.2 135 73-210 223-358 (727)
362 3g39_A Variable lymphocyte rec 99.6 1.7E-14 5.6E-19 131.6 12.3 109 99-210 10-119 (170)
363 3j0a_A TOLL-like receptor 5; m 99.6 8.2E-15 2.8E-19 168.3 11.5 136 73-208 47-189 (844)
364 2r9u_A Variable lymphocyte rec 99.5 2.2E-14 7.6E-19 131.2 11.9 108 100-210 14-122 (174)
365 1m9s_A Internalin B; cell inva 99.5 2.2E-14 7.6E-19 157.1 13.3 128 74-210 43-170 (605)
366 2ell_A Acidic leucine-rich nuc 99.5 1.8E-14 6.2E-19 131.2 9.9 114 71-188 46-165 (168)
367 4fmz_A Internalin; leucine ric 99.5 2.9E-14 9.9E-19 146.3 12.5 110 94-208 217-326 (347)
368 1a9n_A U2A', U2A'; complex (nu 99.5 1.4E-14 4.9E-19 133.0 8.8 114 92-210 13-130 (176)
369 4fmz_A Internalin; leucine ric 99.5 2.7E-14 9.1E-19 146.6 11.0 126 73-206 220-346 (347)
370 1o6v_A Internalin A; bacterial 99.5 2.8E-14 9.5E-19 152.7 10.9 129 73-210 242-370 (466)
371 1ds9_A Outer arm dynein; leuci 99.5 7E-17 2.4E-21 151.6 -8.4 130 75-208 19-155 (198)
372 3cvr_A Invasion plasmid antige 99.5 5.7E-14 1.9E-18 152.1 11.9 121 73-212 99-226 (571)
373 1o6v_A Internalin A; bacterial 99.5 1.1E-13 3.7E-18 148.0 12.2 127 73-208 220-346 (466)
374 2ifg_A High affinity nerve gro 99.5 1.1E-13 3.6E-18 142.1 10.9 101 80-183 14-117 (347)
375 3bz5_A Internalin-J, INLJ; leu 99.5 2.9E-13 1E-17 143.8 13.3 123 74-209 64-186 (457)
376 1jl5_A Outer protein YOPM; leu 99.5 4.4E-13 1.5E-17 142.3 14.3 98 98-206 131-228 (454)
377 1ds9_A Outer arm dynein; leuci 99.5 6.2E-16 2.1E-20 145.1 -6.9 128 73-207 47-186 (198)
378 3bz5_A Internalin-J, INLJ; leu 99.4 5.6E-13 1.9E-17 141.6 14.4 124 73-209 105-228 (457)
379 3g06_A SSPH2 (leucine-rich rep 99.4 3.9E-13 1.3E-17 147.4 12.5 57 146-209 221-277 (622)
380 2ifg_A High affinity nerve gro 99.4 2.7E-13 9.4E-18 139.0 10.3 106 101-209 11-119 (347)
381 3g06_A SSPH2 (leucine-rich rep 99.4 3.4E-13 1.2E-17 147.9 10.9 117 74-209 61-177 (622)
382 1jl5_A Outer protein YOPM; leu 99.4 1.2E-12 4E-17 139.1 14.0 123 73-210 90-212 (454)
383 2ast_B S-phase kinase-associat 99.4 2.1E-14 7.1E-19 146.7 -0.7 128 75-203 71-205 (336)
384 2ca6_A RAN GTPase-activating p 99.4 3.8E-14 1.3E-18 147.7 0.5 132 75-206 160-316 (386)
385 3goz_A Leucine-rich repeat-con 99.4 9.9E-14 3.4E-18 143.1 2.3 135 75-209 23-183 (362)
386 2ca6_A RAN GTPase-activating p 99.4 4.3E-14 1.5E-18 147.3 -0.8 132 75-206 95-257 (386)
387 2ast_B S-phase kinase-associat 99.4 5.4E-14 1.9E-18 143.5 -0.1 134 73-206 92-236 (336)
388 3goz_A Leucine-rich repeat-con 99.3 3.7E-13 1.3E-17 138.8 4.1 131 78-208 2-153 (362)
389 4ay9_X Follicle-stimulating ho 99.3 4E-12 1.4E-16 130.4 9.0 138 73-211 53-220 (350)
390 3tm0_A Aminoglycoside 3'-phosp 99.3 1E-11 3.5E-16 121.8 10.3 143 336-504 13-212 (263)
391 1z7x_W Ribonuclease inhibitor; 99.2 4.1E-13 1.4E-17 143.4 -3.6 132 75-206 257-411 (461)
392 3un9_A NLR family member X1; l 99.1 2.9E-12 1E-16 131.9 -1.1 134 75-208 102-254 (372)
393 1z7x_W Ribonuclease inhibitor; 99.1 3.6E-12 1.2E-16 136.0 -0.7 108 75-182 114-240 (461)
394 1nd4_A Aminoglycoside 3'-phosp 99.1 9.1E-11 3.1E-15 114.8 8.8 137 337-504 20-213 (264)
395 3dxp_A Putative acyl-COA dehyd 99.0 6.5E-10 2.2E-14 114.3 11.4 145 341-505 42-248 (359)
396 3sb4_A Hypothetical leucine ri 99.0 3.5E-10 1.2E-14 114.8 9.0 38 97-135 100-137 (329)
397 3sb4_A Hypothetical leucine ri 99.0 3.6E-10 1.2E-14 114.7 8.3 133 74-209 101-313 (329)
398 3un9_A NLR family member X1; l 99.0 8.9E-12 3E-16 128.3 -4.2 135 74-208 72-226 (372)
399 3rw6_A Nuclear RNA export fact 99.0 3.7E-11 1.3E-15 116.3 -0.9 104 94-199 137-257 (267)
400 3sg8_A APH(2'')-ID; antibiotic 98.9 7.5E-10 2.6E-14 111.0 3.6 187 342-558 25-287 (304)
401 3ogk_B Coronatine-insensitive 98.8 2.3E-10 7.9E-15 126.1 -0.9 135 75-209 379-529 (592)
402 1io0_A Tropomodulin; LRR prote 98.7 1.8E-09 6.2E-14 99.4 1.0 116 90-205 28-163 (185)
403 3ogk_B Coronatine-insensitive 98.7 5.3E-09 1.8E-13 115.1 2.7 103 75-177 139-251 (592)
404 3r70_A Aminoglycoside phosphot 98.6 1.1E-07 3.9E-12 95.7 10.4 137 338-506 38-238 (320)
405 3rw6_A Nuclear RNA export fact 98.6 6.4E-09 2.2E-13 100.6 0.5 79 95-175 167-257 (267)
406 4gkh_A Aminoglycoside 3'-phosp 98.6 2.9E-07 9.8E-12 90.3 11.2 136 343-504 30-222 (272)
407 1io0_A Tropomodulin; LRR prote 98.5 8.1E-09 2.8E-13 95.0 -1.1 108 75-182 37-164 (185)
408 2p1m_B Transport inhibitor res 98.5 4.3E-09 1.5E-13 115.9 -4.1 108 97-205 371-493 (594)
409 2ra8_A Uncharacterized protein 98.5 5E-08 1.7E-12 99.4 3.0 130 74-206 172-320 (362)
410 2p1m_B Transport inhibitor res 98.4 1.5E-08 5.1E-13 111.6 -2.1 63 97-159 104-169 (594)
411 3d1u_A Putative fructosamine-3 98.4 1.2E-06 4.1E-11 86.5 11.6 143 340-504 18-215 (288)
412 4fdw_A Leucine rich hypothetic 98.4 1.1E-06 3.8E-11 91.1 11.9 131 75-209 158-315 (401)
413 4fdw_A Leucine rich hypothetic 98.4 6.9E-07 2.3E-11 92.7 9.8 147 74-235 203-355 (401)
414 3tdw_A Gentamicin resistance p 98.4 1.6E-06 5.4E-11 86.6 11.4 136 342-505 24-224 (306)
415 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.5E-06 8.7E-11 87.1 10.0 144 341-506 45-244 (362)
416 2ra8_A Uncharacterized protein 98.2 4.1E-07 1.4E-11 92.7 3.5 131 74-207 139-293 (362)
417 3ats_A Putative uncharacterize 98.1 4.5E-06 1.5E-10 85.3 7.4 84 342-437 25-121 (357)
418 2q83_A YTAA protein; 2635576, 98.1 3.1E-05 1E-09 78.5 13.5 32 473-504 220-251 (346)
419 3jr1_A Putative fructosamine-3 97.8 5.6E-05 1.9E-09 75.1 10.0 140 341-501 40-232 (312)
420 3e4g_A ATP synthase subunit S, 97.8 5.5E-06 1.9E-10 74.1 1.9 34 75-108 62-95 (176)
421 3e4g_A ATP synthase subunit S, 97.8 5.3E-06 1.8E-10 74.3 1.3 83 98-180 61-150 (176)
422 2olc_A MTR kinase, methylthior 97.8 7.2E-05 2.5E-09 77.5 10.0 82 342-434 35-120 (397)
423 1pgv_A TMD-1, tropomodulin TMD 97.7 1.1E-05 3.7E-10 73.7 2.5 113 93-205 36-169 (197)
424 3f7w_A Putative fructosamine-3 97.7 0.00018 6.3E-09 70.8 10.6 79 338-436 16-97 (288)
425 2pyw_A Uncharacterized protein 97.5 0.00049 1.7E-08 71.7 12.0 81 473-555 230-313 (420)
426 4gt6_A Cell surface protein; l 97.4 0.00025 8.4E-09 73.4 8.5 117 85-205 252-369 (394)
427 3rfe_A Platelet glycoprotein I 97.4 0.00024 8.3E-09 60.4 6.8 56 150-207 12-69 (130)
428 4h09_A Hypothetical leucine ri 97.4 0.00051 1.8E-08 70.5 9.9 105 93-200 235-340 (379)
429 3rfe_A Platelet glycoprotein I 97.4 0.00029 9.7E-09 60.0 6.4 55 102-158 12-67 (130)
430 4gt6_A Cell surface protein; l 97.3 0.00063 2.2E-08 70.2 9.8 85 115-202 258-343 (394)
431 3dxq_A Choline/ethanolamine ki 97.2 0.00069 2.4E-08 67.1 8.6 32 473-505 171-202 (301)
432 1pgv_A TMD-1, tropomodulin TMD 97.2 4.2E-05 1.4E-09 69.7 -0.5 108 75-182 42-170 (197)
433 3csv_A Aminoglycoside phosphot 97.2 0.00085 2.9E-08 67.5 9.0 34 473-506 181-218 (333)
434 4fs7_A Uncharacterized protein 97.2 0.00085 2.9E-08 69.3 9.0 122 75-203 231-353 (394)
435 1zyl_A Hypothetical protein YI 97.1 0.0028 9.7E-08 63.4 12.0 31 473-505 193-223 (328)
436 4h09_A Hypothetical leucine ri 97.1 0.0012 4E-08 67.8 8.9 114 75-192 241-355 (379)
437 4fs7_A Uncharacterized protein 97.1 0.001 3.4E-08 68.7 8.3 115 86-203 59-195 (394)
438 1nw1_A Choline kinase (49.2 KD 97.1 0.00082 2.8E-08 70.1 7.4 74 342-435 78-158 (429)
439 2ppq_A HSK, HK, homoserine kin 97.0 0.00076 2.6E-08 67.4 6.5 144 342-504 27-216 (322)
440 3feg_A Choline/ethanolamine ki 96.9 0.003 1E-07 64.4 9.4 144 342-504 55-253 (379)
441 3c5i_A Choline kinase; choline 96.5 0.0034 1.2E-07 64.0 6.9 30 474-504 211-240 (369)
442 2qg7_A Ethanolamine kinase PV0 96.5 0.0059 2E-07 63.9 8.4 75 342-436 113-188 (458)
443 3i1a_A Spectinomycin phosphotr 96.3 0.014 4.9E-07 58.5 9.9 32 474-505 205-236 (339)
444 2yle_A Protein spire homolog 1 96.2 0.018 6.1E-07 52.7 9.0 104 435-559 34-137 (229)
445 3f2s_A CK, chetk-alpha, cholin 95.6 0.019 6.5E-07 58.7 7.2 158 342-504 57-279 (401)
446 3mes_A Choline kinase; malaria 94.8 0.069 2.4E-06 55.0 8.7 31 474-505 261-291 (424)
447 4ann_A ESSB; membrane protein, 86.2 1.1 3.8E-05 40.9 5.9 118 407-563 43-162 (215)
448 4ano_A ESSB; membrane protein, 80.4 8.4 0.00029 35.2 9.3 116 407-561 48-165 (219)
449 3cxl_A N-chimerin; SH2, RHO-GA 79.3 0.29 9.9E-06 51.1 -0.9 63 340-418 145-213 (463)
450 3g15_A CK, chetk-alpha, cholin 67.3 2.5 8.6E-05 43.0 2.7 30 476-505 245-280 (401)
451 2k1k_A Ephrin type-A receptor 65.0 3.1 0.00011 26.1 1.7 16 282-297 11-26 (38)
452 3ls8_A Phosphatidylinositol 3- 59.2 1.7E+02 0.0057 31.2 14.7 85 412-504 402-501 (614)
453 2lz0_A Uncharacterized protein 54.0 30 0.001 27.0 6.2 39 91-130 13-51 (100)
454 2lz0_A Uncharacterized protein 53.6 17 0.00058 28.4 4.7 44 110-154 8-51 (100)
455 2x6h_A GH13170P, VPS34, phosph 46.1 3.2E+02 0.011 29.6 15.3 84 413-504 477-575 (696)
456 2ks1_B Epidermal growth factor 35.7 57 0.002 21.1 4.1 10 284-293 14-23 (44)
457 2l2t_A Receptor tyrosine-prote 27.8 66 0.0023 20.8 3.4 9 284-292 13-21 (44)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2e-55 Score=439.70 Aligned_cols=263 Identities=21% Similarity=0.377 Sum_probs=212.7
Q ss_pred hcCcccccccccccCeeEEEEEecC----CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNL 411 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 411 (633)
.++|.+.+.||+|+||+||+|++.+ .++..||||++..... ...++|.+|++++++++||||
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~--------------~~~~~f~~E~~il~~l~HpnI 77 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD--------------NARKDFHREAELLTNLQHEHI 77 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCH--------------HHHHHHHHHHHHHTTCCCTTB
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCCh--------------HHHHHHHHHHHHHHhCCCCCC
Confidence 4678889999999999999998742 3578999999864321 115679999999999999999
Q ss_pred cccceeeecCCccEEEEecccCCCHHHHHhhhc---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCC
Q 006739 412 LPLLAHMARPDCHLLVYEFMKNGSLQDILNDVS---------QGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDL 482 (633)
Q Consensus 412 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Di 482 (633)
|+++|+|.+++..++|||||++|+|.++++... .....++|.++..|+.||++||+|| |+++|+||||
T Consensus 78 V~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDl 154 (299)
T 4asz_A 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDL 154 (299)
T ss_dssp CCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCC
T ss_pred ccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCcc
Confidence 999999999999999999999999999997632 2245799999999999999999999 6789999999
Q ss_pred CCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCccc
Q 006739 483 KPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDF 561 (633)
Q Consensus 483 kp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~ 561 (633)
||+|||+++++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.
T Consensus 155 Kp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~ 234 (299)
T 4asz_A 155 ATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 234 (299)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999999997765544433344679999999999999999999999999999999999 89999764
Q ss_pred ccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 562 FQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
. ..++...+ .....+.. +......+.+++.+||+.||++|||++|+.+.|+++.
T Consensus 235 ~----~~~~~~~i---~~~~~~~~----------p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 235 S----NNEVIECI---TQGRVLQR----------PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp C----HHHHHHHH---HHTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C----HHHHHHHH---HcCCCCCC----------CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 2 22222222 22222110 1111234788999999999999999999999999874
No 2
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-55 Score=435.21 Aligned_cols=265 Identities=24% Similarity=0.398 Sum_probs=203.5
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
...+++++.++||+|+||+||+|+++ ..||||+++...... +..++|.+|++++++++|||||+
T Consensus 33 i~~~~l~l~~~iG~G~fG~Vy~~~~~----~~vAvK~~~~~~~~~------------~~~~~f~~E~~il~~l~HpNIV~ 96 (307)
T 3omv_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH----GDVAVKILKVVDPTP------------EQFQAFRNEVAVLRKTRHVNILL 96 (307)
T ss_dssp CCTTSCCEEEECCCCSSSEEEEEESS----SEEEEEECCCSSCCH------------HHHHHHHHHHHHHTTCCCTTBCC
T ss_pred EcHHHeEEeeEEeeCCCcEEEEEEEC----CcEEEEEEEecCCCH------------HHHHHHHHHHHHHHhCCCCCEee
Confidence 34578889999999999999999863 259999986543221 12567999999999999999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
++|++.+ +..++|||||++|+|.++++.. ...++|..+..|+.|||+||+|| |+++||||||||+|||+++++
T Consensus 97 l~g~~~~-~~~~iVmEy~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yL---H~~~IiHRDlKp~NILl~~~~ 169 (307)
T 3omv_A 97 FMGYMTK-DNLAIVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYL---HAKNIIHRDMKSNNIFLHEGL 169 (307)
T ss_dssp EEEEECS-SSCEEEEECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCCSSSEEEETTE
T ss_pred EEEEEEC-CeEEEEEEcCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCccCHHHEEECCCC
Confidence 9998865 5689999999999999999752 35699999999999999999999 568999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCccccccccccc---CCCCCccchHHHHHHHHHHHhCCCCCcccccccccchH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT---LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSL 570 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~ 570 (633)
.+||+|||+|+...............||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+... ...+
T Consensus 170 ~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~---~~~~ 246 (307)
T 3omv_A 170 TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN---RDQI 246 (307)
T ss_dssp EEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC---HHHH
T ss_pred cEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh---HHHH
Confidence 999999999987765443333345689999999999864 4689999999999999999999999975422 1112
Q ss_pred HHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhhC
Q 006739 571 VKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIRH 633 (633)
Q Consensus 571 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~~ 633 (633)
...+.. ....+.. ...+......+.+++.+||+.||++||||.|+++.|+.+++
T Consensus 247 ~~~~~~---~~~~p~~------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 247 IFMVGR---GYASPDL------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp HHHHHT---TCCCCCS------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred HHHHhc---CCCCCCc------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 222211 1111100 01111222347889999999999999999999999998864
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-54 Score=439.69 Aligned_cols=263 Identities=22% Similarity=0.362 Sum_probs=204.6
Q ss_pred hcCcccccccccccCeeEEEEEecC----CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNL 411 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 411 (633)
.++|...++||+|+||.||+|++++ .+++.||||++..... ...++|.+|++++++++||||
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~--------------~~~~~f~~E~~il~~l~HpnI 105 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE--------------SARQDFQREAELLTMLQHQHI 105 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSH--------------HHHHHHHHHHHHHTTCCCTTB
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCH--------------HHHHHHHHHHHHHHhCCCCCC
Confidence 3567888999999999999998742 4688999999864321 115679999999999999999
Q ss_pred cccceeeecCCccEEEEecccCCCHHHHHhhhcC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeC
Q 006739 412 LPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQ-----------GRRELDWLARHKIALGVACGLEYLHISHNPRIIHR 480 (633)
Q Consensus 412 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~ 480 (633)
|+++|+|.+.+..++|||||++|+|.++++.... ...+++|.++..|+.||++||+|| |+++||||
T Consensus 106 V~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHR 182 (329)
T 4aoj_A 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHR 182 (329)
T ss_dssp CCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHH---HHTTCCCS
T ss_pred CcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecc
Confidence 9999999999999999999999999999976432 134699999999999999999999 57889999
Q ss_pred CCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCc
Q 006739 481 DLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSD 559 (633)
Q Consensus 481 Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~ 559 (633)
||||+|||+++++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||.
T Consensus 183 DLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~ 262 (329)
T 4aoj_A 183 DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262 (329)
T ss_dssp CCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred cccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999998765544444455679999999999999999999999999999999999 899997
Q ss_pred ccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 560 DFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
+.. ...+.+.+. ....+.. ++.....+.+++.+||+.||++||||+||++.|+.+.
T Consensus 263 ~~~----~~~~~~~i~---~g~~~~~----------p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 263 QLS----NTEAIDCIT---QGRELER----------PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp SSC----HHHHHHHHH---HTCCCCC----------CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCC----HHHHHHHHH---cCCCCCC----------cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 632 222222222 2222110 1111234788999999999999999999999999875
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.5e-55 Score=437.84 Aligned_cols=263 Identities=24% Similarity=0.371 Sum_probs=212.4
Q ss_pred cCcccccccccccCeeEEEEEec----CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 337 DGLASLEKIGSGGCGEVYKAELP----GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
.+++..++||+|+||+||+|++. +.+++.||||++....... ..++|.+|+.++++++|||||
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~-------------~~~~f~~E~~il~~l~HpNIV 92 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP-------------LREEFRHEAMLRARLQHPNVV 92 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC--------------CHHHHHHHHHHHHHCCCTTBC
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChH-------------HHHHHHHHHHHHHhCCCCCCC
Confidence 45677899999999999999873 2467899999986443211 146799999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQ------------GRRELDWLARHKIALGVACGLEYLHISHNPRIIHR 480 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~ 480 (633)
+++|+|.+++..++|||||++|||.+++..... ....++|..+..|+.|||+||+|| |+++||||
T Consensus 93 ~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHR 169 (308)
T 4gt4_A 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHK 169 (308)
T ss_dssp CEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHH---HHTTCCCS
T ss_pred CcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHH---HhCCCCCC
Confidence 999999999999999999999999999975322 134689999999999999999999 67889999
Q ss_pred CCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCc
Q 006739 481 DLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSD 559 (633)
Q Consensus 481 Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~ 559 (633)
||||+|||+++++.+||+|||+|+...........+...||+.|||||++.+..|+.++|||||||++|||+| |+.||.
T Consensus 170 DLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~ 249 (308)
T 4gt4_A 170 DLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 249 (308)
T ss_dssp CCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999997755443333455689999999999999999999999999999999998 899997
Q ss_pred ccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 560 DFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
+.. ..++.+.+. .....+. ++.....+.+++.+||+.||++||||+||++.|+.+.
T Consensus 250 ~~~----~~~~~~~i~---~~~~~~~----------p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 250 GYS----NQDVVEMIR---NRQVLPC----------PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp TCC----HHHHHHHHH---TTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCC----HHHHHHHHH---cCCCCCC----------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 642 223333332 2222110 1112234788999999999999999999999998764
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.7e-53 Score=426.98 Aligned_cols=254 Identities=19% Similarity=0.347 Sum_probs=202.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
-++|++++.||+|+||+||+|++. .+|+.||||++....... +..+.+.+|++++++++|||||+++
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~i~~~~~~~------------~~~~~~~~E~~il~~l~HpnIV~~~ 89 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKST-EDGRQYVIKEINISRMSS------------KEREESRREVAVLANMKHPNIVQYR 89 (350)
T ss_dssp CCCEEEEEEC------CEEEEEET-TTCCEEEEEEEECTTSCH------------HHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccceEEeEEEecCCCeEEEEEEEC-CCCCEEEEEEEehHHCCH------------HHHHHHHHHHHHHHHCCCCCCCcEE
Confidence 368999999999999999999864 579999999997654321 1256789999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+++..|+|||||+||+|.+++... ....+++..++.|+.||+.||+|| |+++|+||||||+|||+++++.+
T Consensus 90 ~~~~~~~~~yiVmEy~~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~v 164 (350)
T 4b9d_A 90 ESFEENGSLYIVMDYCEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHV---HDRKILHRDIKSQNIFLTKDGTV 164 (350)
T ss_dssp EEEEETTEEEEEEECCTTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHH---HHTTCEETTCCGGGEEECTTCCE
T ss_pred EEEEECCEEEEEEeCCCCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCHHHEEECCCCCE
Confidence 9999999999999999999999999752 245689999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
||+|||+|+....... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||.... ..+.+.
T Consensus 165 Kl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-------~~~~~~ 235 (350)
T 4b9d_A 165 QLGDFGIARVLNSTVE--LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-------MKNLVL 235 (350)
T ss_dssp EECSTTEESCCCHHHH--HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHH
T ss_pred EEcccccceeecCCcc--cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-------HHHHHH
Confidence 9999999987654221 1234679999999999999999999999999999999999999997532 122222
Q ss_pred HhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 576 NVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 576 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+.....+. .. ... ...+.+++.+||+.||++|||++|+++
T Consensus 236 ~i~~~~~~~--~~-----~~~---s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 236 KIISGSFPP--VS-----LHY---SYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHTCCCC--CC-----TTS---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHcCCCCC--CC-----ccC---CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 232222211 00 111 223778999999999999999999975
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=8e-53 Score=424.51 Aligned_cols=257 Identities=23% Similarity=0.284 Sum_probs=205.1
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....+.|+..++||+|+||.||+|++. .+|+.||||++..... ..+|+.++++++|||||
T Consensus 54 ~~~~~~~~~~~~lG~G~fG~Vy~a~~~-~~g~~vAiK~i~~~~~-------------------~~~E~~il~~l~HpnIV 113 (336)
T 4g3f_A 54 REEVHWMTHQPRVGRGSFGEVHRMKDK-QTGFQCAVKKVRLEVF-------------------RVEELVACAGLSSPRIV 113 (336)
T ss_dssp CBTTTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTC-------------------CTHHHHTTTTCCCTTBC
T ss_pred hcchhheEeCcEeccCCCeEEEEEEEC-CCCCEEEEEEECHHHh-------------------HHHHHHHHHhCCCCCCC
Confidence 334567888899999999999999875 5799999999864321 24689999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++.+++..|+|||||+||+|.+++++. ..+++..+..++.||+.||+|| |+++||||||||+|||++.+
T Consensus 114 ~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~ 186 (336)
T 4g3f_A 114 PLYGAVREGPWVNIFMELLEGGSLGQLIKQM----GCLPEDRALYYLGQALEGLEYL---HTRRILHGDVKADNVLLSSD 186 (336)
T ss_dssp CEEEEEEETTEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCCGGGEEECTT
T ss_pred cEEEEEEECCEEEEEEeccCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH---HHCCceecccCHHHEEEeCC
Confidence 9999999999999999999999999999863 4699999999999999999999 78899999999999999998
Q ss_pred C-ceEEcccccccccCCCCCcc---eecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 493 M-EARIADFGLAKAMPDAQTHI---TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 493 ~-~~kl~DfG~a~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
| .+||+|||+|+.+....... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.....
T Consensus 187 g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--- 263 (336)
T 4g3f_A 187 GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--- 263 (336)
T ss_dssp SCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC---
T ss_pred CCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---
Confidence 7 69999999999876543221 2234679999999999999999999999999999999999999997643321
Q ss_pred hHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 569 SLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
...+. .....+... + ++.....+.+++.+||+.||++|||+.|+++.|...
T Consensus 264 ~~~~i----~~~~~~~~~----~----~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 264 LCLKI----ASEPPPIRE----I----PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp CHHHH----HHSCCGGGG----S----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHH----HcCCCCchh----c----CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 11111 112211111 1 111223477889999999999999999999887653
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.6e-52 Score=423.50 Aligned_cols=251 Identities=24% Similarity=0.373 Sum_probs=205.3
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|+..++||+|+||.||+|++. .+|+.||||++....... .+.+.+|++++++++|||||+++
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~-~tg~~vAiK~i~~~~~~~--------------~~~~~~Ei~il~~l~HpnIV~l~ 137 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVR-SSGKLVAVKKMDLRKQQR--------------RELLFNEVVIMRDYQHENVVEMY 137 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEGGGCSS--------------GGGGHHHHHHHHHCCCTTBCCEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEEC-CCCCEEEEEEEecCchhH--------------HHHHHHHHHHHHhCCCCCCCcEE
Confidence 356899999999999999999875 579999999985432111 34578899999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+++..|+|||||+||+|.+++.. ..+++..+..++.||+.||+|| |+++|+||||||+|||++.++.+
T Consensus 138 ~~~~~~~~~~ivmEy~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~v 209 (346)
T 4fih_A 138 NSYLVGDELWVVMEFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRV 209 (346)
T ss_dssp EEEEETTEEEEEECCCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCE
T ss_pred EEEEECCEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEECCCCCE
Confidence 999999999999999999999999974 3589999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
||+|||+|+.+...... ....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.. .....+.+.
T Consensus 210 Kl~DFGla~~~~~~~~~--~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~----~~~~~~~i~ 283 (346)
T 4fih_A 210 KLSDFGFCAQVSKEVPR--RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP----PLKAMKMIR 283 (346)
T ss_dssp EECCCTTCEECCSSSCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHHHHHH
T ss_pred EEecCcCceecCCCCCc--ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC----HHHHHHHHH
Confidence 99999999987654332 235689999999999999999999999999999999999999997532 222222222
Q ss_pred HhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 576 NVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 576 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
....+. .-. .......+.+++.+||+.||++|||++|+++
T Consensus 284 ---~~~~~~-~~~-------~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 284 ---DNLPPR-LKN-------LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ---HSSCCC-CSC-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---cCCCCC-CCc-------cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 211111 000 0111223778999999999999999999875
No 8
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=8.1e-53 Score=419.28 Aligned_cols=251 Identities=22% Similarity=0.327 Sum_probs=207.2
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccce
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA 416 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 416 (633)
++|++.+.||+|+||+||+|+.. .+|+.||||++.+... ......+.+.+|++++++++|||||++++
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~-~~~~~~AiK~i~k~~~-----------~~~~~~~~~~~E~~il~~l~HpnIv~l~~ 99 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLAREL-ATSREYAIKILEKRHI-----------IKENKVPYVTRERDVMSRLDHPFFVKLYF 99 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHH-----------HHTTCHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred cccEEEEEEecccCeEEEEEEEC-CCCCEEEEEEEEHHHC-----------CCHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 57999999999999999999865 6899999999853211 01112567899999999999999999999
Q ss_pred eeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceE
Q 006739 417 HMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEAR 496 (633)
Q Consensus 417 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~k 496 (633)
++.+++..|+||||++||+|.+++.+ ...+++..+..++.||+.||+|| |+++|+||||||+|||+++++.+|
T Consensus 100 ~~~~~~~~yivmEy~~gG~L~~~i~~----~~~l~e~~~~~~~~qi~~al~yl---H~~~IiHRDlKPeNILl~~~g~vK 172 (311)
T 4aw0_A 100 TFQDDEKLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYL---HGKGIIHRDLKPENILLNEDMHIQ 172 (311)
T ss_dssp EEECSSEEEEEECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEE
T ss_pred EEEeCCEEEEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHeEEcCCCCEE
Confidence 99999999999999999999999986 34699999999999999999999 678999999999999999999999
Q ss_pred EcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHHH
Q 006739 497 IADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRN 576 (633)
Q Consensus 497 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 576 (633)
|+|||+|+.+............+||+.|||||++.+..|+.++||||+||++|||++|+.||.... ...+ ...
T Consensus 173 l~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~----~~~~---~~~ 245 (311)
T 4aw0_A 173 ITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN----EGLI---FAK 245 (311)
T ss_dssp ECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHH---HHH
T ss_pred EEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----HHHH---HHH
Confidence 999999998765544334456789999999999999999999999999999999999999997532 2222 222
Q ss_pred hhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHH
Q 006739 577 VMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVR 625 (633)
Q Consensus 577 ~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~ 625 (633)
+.... ..++.+ ...+.+++.+||+.||++|||++|++
T Consensus 246 i~~~~~~~p~~~------------s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 246 IIKLEYDFPEKF------------FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHTCCCCCTTC------------CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred HHcCCCCCCccc------------CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 22211 111111 12377899999999999999999864
No 9
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.9e-52 Score=419.79 Aligned_cols=267 Identities=27% Similarity=0.343 Sum_probs=201.0
Q ss_pred CcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccccee
Q 006739 338 GLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAH 417 (633)
Q Consensus 338 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 417 (633)
+|.+.++||+|+||+||+|++ +|+.||||++.... . . ...++.|+..+.+++|||||+++++
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~---~g~~VAvK~l~~~~--------~-~------~~~~e~Ei~~~~~l~HpNIv~l~g~ 65 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSRE--------E-R------SWFREAEIYQTVMLRHENILGFIAA 65 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE---TTEEEEEEEECGGG--------H-H------HHHHHHHHHTSTTCCCTTBCCEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE---CCEEEEEEEECccc--------h-h------hHHHHHHHHHHhcCCCCCCCcEEEE
Confidence 467789999999999999987 68999999984321 0 0 1233467777888999999999999
Q ss_pred eecCC----ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeeCCCCCCCeE
Q 006739 418 MARPD----CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHIS-----HNPRIIHRDLKPANVL 488 (633)
Q Consensus 418 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~-----h~~~ivH~Dikp~Nil 488 (633)
|.+++ ..|+|||||++|+|.++++. ..++|..+.+++.|+++||+|||.. |+++|+||||||+|||
T Consensus 66 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NIL 140 (303)
T 3hmm_A 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL 140 (303)
T ss_dssp EEEECSSSEEEEEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEE
T ss_pred EEecCCCceEEEEEecCCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEE
Confidence 97654 57899999999999999975 4589999999999999999999743 4569999999999999
Q ss_pred ecCCCceEEcccccccccCCCCCcc--eecccccCcccccccccccC------CCCCccchHHHHHHHHHHHhCCCCCcc
Q 006739 489 LDDDMEARIADFGLAKAMPDAQTHI--TTSNVAGTVGYIAPEYHQTL------KFTDKCDIYSFGVLLAVLVMGRLPSDD 560 (633)
Q Consensus 489 l~~~~~~kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~elltg~~p~~~ 560 (633)
+++++++||+|||+|+......... ......||+.|||||++.+. .++.++|||||||++|||+||+.||..
T Consensus 141 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~ 220 (303)
T 3hmm_A 141 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220 (303)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred ECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCc
Confidence 9999999999999998775543321 22345799999999998764 367799999999999999999887653
Q ss_pred ccccc--------ccchHHHHHHHhhccCCcchhhhhhhhhc-CCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 561 FFQHT--------EEMSLVKWMRNVMTSENPTRAIDAKLLEN-GYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 561 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
..... .......+.+........ +.+... ...+....+.+++.+||+.||++||||.|+++.|+++
T Consensus 221 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~r-----p~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l 295 (303)
T 3hmm_A 221 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLR-----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC-----CCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccccccchhcccccchHHHHHHHHhcccCC-----CCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 22110 011122222222221111 111111 1224556688999999999999999999999999988
Q ss_pred h
Q 006739 632 R 632 (633)
Q Consensus 632 ~ 632 (633)
+
T Consensus 296 ~ 296 (303)
T 3hmm_A 296 S 296 (303)
T ss_dssp H
T ss_pred H
Confidence 4
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7.5e-53 Score=430.26 Aligned_cols=266 Identities=24% Similarity=0.350 Sum_probs=215.1
Q ss_pred hhhcCcccccccccccCeeEEEEEecCC----CCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC-
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGS----NGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRH- 408 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h- 408 (633)
...++|++.+.||+|+||.||+|++.+. .++.||||++...... ...++|.+|++++.+++|
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~-------------~~~~~~~~E~~il~~l~hh 127 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-------------SEHRALMSELKILIHIGHH 127 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCH-------------HHHHHHHHHHHHHHHHCCC
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccCh-------------HHHHHHHHHHHHHHHcCCC
Confidence 3457899999999999999999987532 3468999998654321 114678999999999965
Q ss_pred CcccccceeeecC-CccEEEEecccCCCHHHHHhhhcC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 006739 409 RNLLPLLAHMARP-DCHLLVYEFMKNGSLQDILNDVSQ------------GRRELDWLARHKIALGVACGLEYLHISHNP 475 (633)
Q Consensus 409 ~niv~l~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~ 475 (633)
||||+++|+|.++ +..++|||||++|+|.++++.... ....+++..+..++.|||+||+|| |++
T Consensus 128 pnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yL---H~~ 204 (353)
T 4ase_A 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 204 (353)
T ss_dssp TTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHH---HHT
T ss_pred CcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhH---hhC
Confidence 8999999999764 568999999999999999976432 135589999999999999999999 678
Q ss_pred CeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-C
Q 006739 476 RIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-G 554 (633)
Q Consensus 476 ~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g 554 (633)
+||||||||+|||+++++.+||+|||+|+...........+...||+.|||||++.+..|+.++|||||||++|||+| |
T Consensus 205 ~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G 284 (353)
T 4ase_A 205 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 284 (353)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred CeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCC
Confidence 999999999999999999999999999998776655555566789999999999999999999999999999999998 9
Q ss_pred CCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 555 RLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 555 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
+.||.+... ...+.+.+.. ..++.. ... ....+.+++.+||+.||++|||++|+++.|+++
T Consensus 285 ~~Pf~~~~~---~~~~~~~i~~---g~~~~~------p~~----~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 285 ASPYPGVKI---DEEFCRRLKE---GTRMRA------PDY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp CCSSTTCCC---SHHHHHHHHH---TCCCCC------CTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCH---HHHHHHHHHc---CCCCCC------Ccc----CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 999976432 2223333322 111110 011 122377889999999999999999999999886
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8.2e-52 Score=410.33 Aligned_cols=247 Identities=23% Similarity=0.368 Sum_probs=195.5
Q ss_pred ccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccceeee
Q 006739 340 ASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMA 419 (633)
Q Consensus 340 ~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 419 (633)
+..++||+|+||.||+|.+. .++..||+|++...... ....+.|.+|++++++++|||||+++++|.
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~-~~~~~vAiK~i~~~~~~------------~~~~~~~~~E~~il~~l~HpnIV~~~~~~~ 95 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDT-ETTVEVAWCELQDRKLT------------KSERQRFKEEAEMLKGLQHPNIVRFYDSWE 95 (290)
T ss_dssp EEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGGSC------------HHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEEC-CCCeEEEEEEEchhhCC------------HHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence 56678999999999999875 57899999998643221 112567999999999999999999999986
Q ss_pred c----CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeCCCCCCCeEecC-C
Q 006739 420 R----PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPR--IIHRDLKPANVLLDD-D 492 (633)
Q Consensus 420 ~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~--ivH~Dikp~Nill~~-~ 492 (633)
+ ++..|+|||||++|+|.+++++ ...+++..+..++.||++||+||| +++ |+||||||+|||++. +
T Consensus 96 ~~~~~~~~~~lvmEy~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~ 168 (290)
T 3fpq_A 96 STVKGKKCIVLVTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPT 168 (290)
T ss_dssp EEETTEEEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTT
T ss_pred eccCCCcEEEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCC
Confidence 5 3457999999999999999986 346999999999999999999994 555 999999999999984 7
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+.+||+|||+|+...... ....+||+.|||||++.+ +|+.++|||||||++|||+||+.||.+... ...
T Consensus 169 g~vKl~DFGla~~~~~~~----~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~------~~~ 237 (290)
T 3fpq_A 169 GSVKIGDLGLATLKRASF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN------AAQ 237 (290)
T ss_dssp SCEEECCTTGGGGCCTTS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS------HHH
T ss_pred CCEEEEeCcCCEeCCCCc----cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc------HHH
Confidence 899999999998654322 234689999999998865 699999999999999999999999965321 112
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
..+.+.....+. ..+ ....+ .+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~i~~~~~~~-~~~----~~~~~----~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 238 IYRRVTSGVKPA-SFD----KVAIP----EVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHTTTCCCG-GGG----GCCCH----HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHcCCCCC-CCC----ccCCH----HHHHHHHHHccCChhHCcCHHHHhc
Confidence 222222222221 111 11122 3778899999999999999999875
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.3e-51 Score=402.29 Aligned_cols=248 Identities=25% Similarity=0.395 Sum_probs=189.9
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccce
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA 416 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 416 (633)
++|++.+.||+|+||+||+|+.. .+|+.||+|++.+...... .....+.+|++++++++|||||++++
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~-~~~~~vAiK~i~~~~~~~~-----------~~~~~~~~Ei~il~~l~HpnIv~~~~ 80 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHT-TTGQKVALKIINKKVLAKS-----------DMQGRIEREISYLRLLRHPHIIKLYD 80 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECT-TTCCEEEEEEEECC-----------------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEEC-CCCCEEEEEEEeHHHcCCH-----------HHHHHHHHHHHHHHHCCCCCCCeEEE
Confidence 68999999999999999999864 5799999999865432111 11457899999999999999999999
Q ss_pred eeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceE
Q 006739 417 HMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEAR 496 (633)
Q Consensus 417 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~k 496 (633)
++.+++..|+||||+ +|+|.+++.+ ...+++..+..++.||+.||+|| |+++|+||||||+|||+++++.+|
T Consensus 81 ~~~~~~~~~ivmEy~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~yl---H~~~IiHRDiKP~NILl~~~~~vk 152 (275)
T 3hyh_A 81 VIKSKDEIIMVIEYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYC---HRHKIVHRDLKPENLLLDEHLNVK 152 (275)
T ss_dssp EEECSSEEEEEEECC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCTTTEEECTTCCEE
T ss_pred EEEECCEEEEEEeCC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCChHHeEECCCCCEE
Confidence 999999999999999 6799999875 35699999999999999999999 678999999999999999999999
Q ss_pred EcccccccccCCCCCcceecccccCcccccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 497 IADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKF-TDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 497 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
|+|||+|+...+... ....+||+.|||||++.+..+ +.++||||+||++|||+||+.||.+.. ...+ .+
T Consensus 153 l~DFGla~~~~~~~~---~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~----~~~~---~~ 222 (275)
T 3hyh_A 153 IADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES----IPVL---FK 222 (275)
T ss_dssp ECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHH---HH
T ss_pred EeecCCCeecCCCCc---cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC----HHHH---HH
Confidence 999999987654332 234689999999999998876 579999999999999999999997521 1222 22
Q ss_pred HhhccCC-cchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 576 NVMTSEN-PTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 576 ~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+..... .++.+ ...+.+++.+||+.||++|||++|+++
T Consensus 223 ~i~~~~~~~p~~~------------s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 223 NISNGVYTLPKFL------------SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHTCCCCCTTS------------CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHcCCCCCCCCC------------CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 2222211 11111 123678999999999999999999986
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.2e-51 Score=424.23 Aligned_cols=251 Identities=24% Similarity=0.370 Sum_probs=206.1
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|+..++||+|+||.||+|++. .+|+.||||++....... .+.+.+|+.++++++|||||+++
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~-~tg~~vAiK~i~~~~~~~--------------~~~~~~Ei~il~~l~HpnIV~l~ 214 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVR-SSGKLVAVKKMDLRKQQR--------------RELLFNEVVIMRDYQHENVVEMY 214 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEESTTCSS--------------GGGHHHHHHHHHHCCCTTBCCEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEEC-CCCCEEEEEEEeccchhH--------------HHHHHHHHHHHHhCCCCCCCceE
Confidence 467999999999999999999875 579999999996543211 34578899999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+++..|+|||||+||+|.++++. ..+++..+..++.||+.||+|| |+++||||||||+|||++.+|.+
T Consensus 215 ~~~~~~~~~~iVmEy~~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~yl---H~~~IiHRDiKp~NILl~~~g~v 286 (423)
T 4fie_A 215 NSYLVGDELWVVMEFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRV 286 (423)
T ss_dssp EEEEETTEEEEEEECCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSTTTEEECTTCCE
T ss_pred EEEEECCEEEEEEeCCCCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHH---HHCCeecccCCHHHEEEcCCCCE
Confidence 999999999999999999999999974 3589999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
||+|||+|+.+...... ....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.. .....+.+.
T Consensus 287 Kl~DFGla~~~~~~~~~--~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~----~~~~~~~i~ 360 (423)
T 4fie_A 287 KLSDFGFCAQVSKEVPR--RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP----PLKAMKMIR 360 (423)
T ss_dssp EECCCTTCEECCSSCCC--BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHHHHHH
T ss_pred EEecCccceECCCCCcc--ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC----HHHHHHHHH
Confidence 99999999987654332 235689999999999999999999999999999999999999996532 222222222
Q ss_pred HhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 576 NVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 576 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
....+. .- ........+.+|+.+||+.||++|||++|+++
T Consensus 361 ---~~~~~~-~~-------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 361 ---DNLPPR-LK-------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ---HSCCCC-CS-------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---cCCCCC-Cc-------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 211111 00 00111223778999999999999999999875
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.3e-51 Score=409.06 Aligned_cols=245 Identities=23% Similarity=0.340 Sum_probs=193.5
Q ss_pred cCcccccccccccCeeEEEEEec--CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 337 DGLASLEKIGSGGCGEVYKAELP--GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
++|++.+.||+|+||+||+|+.. +.+++.||+|++.+....... ..++.+|++++++++|||||++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~------------~~~~~~E~~il~~l~HpnIv~l 91 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD------------RVRTKMERDILVEVNHPFIVKL 91 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEE------------CC------CCCCCCCCTTEECE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHH------------HHHHHHHHHHHHHCCCCCCCeE
Confidence 67999999999999999999863 346789999998754322111 2357789999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+++..|+|||||+||+|.+++.+ ...+++..+..++.||+.||+|| |+++|+||||||+|||+++++.
T Consensus 92 ~~~~~~~~~~~ivmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~ 164 (304)
T 3ubd_A 92 HYAFQTEGKLYLILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHL---HSLGIIYRDLKPENILLDEEGH 164 (304)
T ss_dssp EEEEEETTEEEEEECCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECTTSC
T ss_pred EEEEEECCEEEEEEEcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHeEEcCCCC
Confidence 9999999999999999999999999986 34699999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
+||+|||+|+...+.... ....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.. ...+ +
T Consensus 165 vKl~DFGla~~~~~~~~~--~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~----~~~~---~ 235 (304)
T 3ubd_A 165 IKLTDFGLSKESIDHEKK--AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD----RKET---M 235 (304)
T ss_dssp EEEESSEEEEC-----CC--CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHH---H
T ss_pred EEecccccceeccCCCcc--ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC----HHHH---H
Confidence 999999999876543322 234689999999999999999999999999999999999999997532 1222 2
Q ss_pred HHhhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCH
Q 006739 575 RNVMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNS 621 (633)
Q Consensus 575 ~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 621 (633)
..+.... ..+..+ ...+.+++.+||+.||++|||+
T Consensus 236 ~~i~~~~~~~p~~~------------s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 236 TMILKAKLGMPQFL------------SPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp HHHHHCCCCCCTTS------------CHHHHHHHHHHTCSSGGGSTTC
T ss_pred HHHHcCCCCCCCcC------------CHHHHHHHHHHcccCHHHCCCC
Confidence 2222211 111111 1237789999999999999995
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.2e-49 Score=396.64 Aligned_cols=253 Identities=23% Similarity=0.387 Sum_probs=188.3
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccce
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA 416 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 416 (633)
++|++.+.||+|+||.||+|+.. .+|+.||||++.....+ ...+.+.+|++++++++|||||++++
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~i~~~~~~-------------~~~~~~~~E~~il~~l~HpnIV~~~~ 70 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNK-VDDCNYAIKRIRLPNRE-------------LAREKVMREVKALAKLEHPGIVRYFN 70 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEET-TTCCEEEEEEEEECSSH-------------HHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred hhCEEeeEEecCCCeEEEEEEEC-CCCCEEEEEEEeccCCH-------------HHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 45899999999999999999864 57899999998654321 11457889999999999999999999
Q ss_pred eeecCC------------ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCC
Q 006739 417 HMARPD------------CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKP 484 (633)
Q Consensus 417 ~~~~~~------------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp 484 (633)
++.+.+ ..|+||||+++|+|.+++..... ....++..++.++.||++||+|| |+++|+||||||
T Consensus 71 ~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~yl---H~~~IiHRDlKp 146 (299)
T 4g31_A 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFL---HSKGLMHRDLKP 146 (299)
T ss_dssp EEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCG
T ss_pred EEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHH---HHCcCccccCcH
Confidence 986544 36899999999999999975322 23456778899999999999999 678999999999
Q ss_pred CCeEecCCCceEEcccccccccCCCCCcc----------eecccccCcccccccccccCCCCCccchHHHHHHHHHHHhC
Q 006739 485 ANVLLDDDMEARIADFGLAKAMPDAQTHI----------TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMG 554 (633)
Q Consensus 485 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg 554 (633)
+|||++.++.+||+|||+|+......... ..+..+||+.|||||++.+..|+.++|||||||++|||++
T Consensus 147 ~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~- 225 (299)
T 4g31_A 147 SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY- 225 (299)
T ss_dssp GGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS-
T ss_pred HHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc-
Confidence 99999999999999999999876543211 1234579999999999999999999999999999999996
Q ss_pred CCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 555 RLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 555 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
||.... +....+........+ ... ........+++.+||+.||++|||+.|+++
T Consensus 226 --Pf~~~~------~~~~~~~~~~~~~~p-~~~---------~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 226 --PFSTQM------ERVRTLTDVRNLKFP-PLF---------TQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp --CCSSHH------HHHHHHHHHHTTCCC-HHH---------HHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCCCcc------HHHHHHHHHhcCCCC-CCC---------cccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 765321 111222222222211 111 111223567899999999999999999986
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-47 Score=394.97 Aligned_cols=265 Identities=22% Similarity=0.339 Sum_probs=200.0
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccce
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA 416 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 416 (633)
++|++++.||+|+||.||+|++. .+|+.||||++....... ...+.+.+|+++|++++|||||++++
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~-~t~~~vAiK~i~~~~~~~------------~~~~~~~~Ei~il~~l~HpnIv~l~~ 120 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRR-LTGQQVAIKKIPNAFDVV------------TNAKRTLRELKILKHFKHDNIIAIKD 120 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEETTTTSSH------------HHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CCeEEEEEEecccCeEEEEEEEC-CCCCEEEEEEECccccch------------HHHHHHHHHHHHHHhcCCCCcceEee
Confidence 57999999999999999999864 579999999996543211 11456889999999999999999999
Q ss_pred eeec------CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 417 HMAR------PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 417 ~~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
++.. .+..|+|||||+ |+|.+++.. ...+++..+..++.||+.||+|| |+++|+||||||+|||++
T Consensus 121 ~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~yl---H~~~iiHRDlKP~NIl~~ 192 (398)
T 4b99_A 121 ILRPTVPYGEFKSVYVVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYM---HSAQVIHRDLKPSNLLVN 192 (398)
T ss_dssp ECCCSSCTTTCCCEEEEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEEC
T ss_pred eeecccccccCCEEEEEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCcCcCCCcCccccccC
Confidence 8754 357899999995 689999865 45799999999999999999999 688999999999999999
Q ss_pred CCCceEEcccccccccCCCCC--cceecccccCcccccccccccC-CCCCccchHHHHHHHHHHHhCCCCCccccccccc
Q 006739 491 DDMEARIADFGLAKAMPDAQT--HITTSNVAGTVGYIAPEYHQTL-KFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEE 567 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~ 567 (633)
.++.+||+|||+|+.+..... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+.. .
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~----~ 268 (398)
T 4b99_A 193 ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN----Y 268 (398)
T ss_dssp TTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS----H
T ss_pred CCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC----H
Confidence 999999999999987654321 1123457899999999998875 46899999999999999999999997532 2
Q ss_pred chHHHHHHHhhccCCcchh----------hhhhhhh-------cCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 568 MSLVKWMRNVMTSENPTRA----------IDAKLLE-------NGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~----------~d~~~~~-------~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
......+............ ....+.. ...+.....+.+++.+||+.||++|||++|+++
T Consensus 269 ~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 269 VHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 2222222222221111000 0000000 000011234778999999999999999999875
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.1e-46 Score=387.56 Aligned_cols=200 Identities=27% Similarity=0.409 Sum_probs=170.1
Q ss_pred hhcCcccccccccccCeeEEEEEec--CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCcc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELP--GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNL 411 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni 411 (633)
-.+.|++.+.||+|+||+||+|+.+ ..+++.||+|++..... ..++.+|+++++.+ +||||
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~----------------~~~~~~E~~~l~~~~~h~nI 82 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH----------------PIRIAAELQCLTVAGGQDNV 82 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC----------------HHHHHHHHHHHHHTCSBTTB
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC----------------HHHHHHHHHHHHHhcCCCCC
Confidence 4578999999999999999999764 24578999999865431 34577899999988 69999
Q ss_pred cccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC
Q 006739 412 LPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD 491 (633)
Q Consensus 412 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~ 491 (633)
|++++++.+.+..|+||||+++|+|.+++. .+++.++..++.|++.||+|| |+++|+||||||+|||++.
T Consensus 83 v~l~~~~~~~~~~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~yl---H~~gIiHRDiKPeNiLl~~ 152 (361)
T 4f9c_A 83 MGVKYCFRKNDHVVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRI---HQFGIVHRDVKPSNFLYNR 152 (361)
T ss_dssp CCCSEEEEETTEEEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEET
T ss_pred ceEEEEEEECCEEEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCcCCHHHeEEeC
Confidence 999999999999999999999999999984 388999999999999999999 6889999999999999987
Q ss_pred C-CceEEcccccccccCCCCCc--------------------------ceecccccCcccccccccccC-CCCCccchHH
Q 006739 492 D-MEARIADFGLAKAMPDAQTH--------------------------ITTSNVAGTVGYIAPEYHQTL-KFTDKCDIYS 543 (633)
Q Consensus 492 ~-~~~kl~DfG~a~~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s 543 (633)
+ +.+||+|||+|+...+.... ......+||+.|+|||++.+. .|+.++||||
T Consensus 153 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWS 232 (361)
T 4f9c_A 153 RLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWS 232 (361)
T ss_dssp TTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHH
T ss_pred CCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhh
Confidence 6 79999999999866543211 011335799999999998775 5899999999
Q ss_pred HHHHHHHHHhCCCCCcc
Q 006739 544 FGVLLAVLVMGRLPSDD 560 (633)
Q Consensus 544 ~G~~l~elltg~~p~~~ 560 (633)
+||++|||++|+.||..
T Consensus 233 lG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 233 AGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp HHHHHHHHHHTCSSSSC
T ss_pred hHHHHHHHHHCCCCCCC
Confidence 99999999999999854
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.2e-45 Score=377.29 Aligned_cols=279 Identities=30% Similarity=0.502 Sum_probs=234.4
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|+..+.||+|+||.||+|++. +++.||||++...... ..+.+.+|++++++++||||+
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~h~~iv 98 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVLR--DGAKVALKRRTPESSQ--------------GIEEFETEIETLSFCRHPHLV 98 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEECT--TCCEEEEEECCSCCSS--------------HHHHHHHHHHGGGSCCCTTBC
T ss_pred HHHHhccCccceeecCCCeeEEEEEEC--CCCEEEEEEecccChH--------------HHHHHHHHHHHHHhCCCCCEe
Confidence 445689999999999999999999864 7899999988654321 145788999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++.+.+..++||||+++|+|.+++.........+++..++.++.|+++||+|| |+.+|+||||||+||+++.+
T Consensus 99 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~ivH~dlkp~Nil~~~~ 175 (321)
T 2qkw_B 99 SLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIHRDVKSINILLDEN 175 (321)
T ss_dssp CEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCSTTEEECTT
T ss_pred eEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHh---cCCCeecCCCCHHHEEECCC
Confidence 999999999999999999999999999976444445799999999999999999999 67899999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......+
T Consensus 176 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~-~~~~~~~~ 254 (321)
T 2qkw_B 176 FVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP-REMVNLAE 254 (321)
T ss_dssp CCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSS-SSCCCHHH
T ss_pred CCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCc-HHHHHHHH
Confidence 99999999999876543322222345689999999999988999999999999999999999999976443 23344556
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
|.............+++.......++....+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 313 (321)
T 2qkw_B 255 WAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313 (321)
T ss_dssp HTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 65555555555556666665666777888899999999999999999999999999876
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.9e-46 Score=401.51 Aligned_cols=254 Identities=24% Similarity=0.315 Sum_probs=200.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.++||+|+||.||+|+.. .+|+.||+|++.+....... ........+.++.+++.++|||||+++
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~-~tg~~~AiK~i~K~~i~~~~--------~~~~~~~E~~~l~ll~~~~HP~IV~l~ 258 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIKMKQ--------GETLALNERIMLSLVSTGDCPFIVCMS 258 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHTT--------CHHHHHHHHHHHHHHSSSCCTTBCCEE
T ss_pred hHHeEEEEEEecccCeEEEEEEEC-CCCCEEEEEEEeHHHcchhh--------hHHHHHHHHHHHHHHhhCCCCCEeEEE
Confidence 478999999999999999999875 68999999998542211000 001122334567788889999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+.+|+|||||+||+|.+++.+. ..+++..+..++.||+.||+|| |+++||||||||+|||++.+|.+
T Consensus 259 ~~f~~~~~lylVmEy~~GGdL~~~l~~~----~~l~E~~a~~y~~qIl~aL~yL---H~~gIiHRDLKPeNILld~~G~v 331 (689)
T 3v5w_A 259 YAFHTPDKLSFILDLMNGGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHM---HNRFVVYRDLKPANILLDEHGHV 331 (689)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECTTSCE
T ss_pred EEEEECCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCchHHeEEeCCCCE
Confidence 9999999999999999999999999863 4699999999999999999999 78999999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
||+|||+|+....... ...+||+.|||||++.+ ..|+.++||||+||++|||++|+.||.+.... ...+..
T Consensus 332 KL~DFGlA~~~~~~~~----~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~----~~~~i~ 403 (689)
T 3v5w_A 332 RISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----DKHEID 403 (689)
T ss_dssp EECCCTTCEECSSCCC----CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC----CHHHHH
T ss_pred EecccceeeecCCCCC----CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHH
Confidence 9999999998765432 34689999999999964 57999999999999999999999999753321 111222
Q ss_pred HHhhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCC-----HHHHH
Q 006739 575 RNVMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPN-----SKDVR 625 (633)
Q Consensus 575 ~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs-----~~ev~ 625 (633)
+...... ..+..+ ...+.+++.+||+.||.+|++ ++|++
T Consensus 404 ~~i~~~~~~~p~~~------------S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 404 RMTLTMAVELPDSF------------SPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp HHHHHCCCCCCTTS------------CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred HhhcCCCCCCCccC------------CHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 2222211 111111 123778999999999999998 56664
No 20
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.1e-45 Score=378.39 Aligned_cols=282 Identities=37% Similarity=0.641 Sum_probs=239.6
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|+..+.||+|+||.||+|+.. +|+.||||++....... ....+.+|++++++++||||+
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~-------------~~~~~~~e~~~l~~l~h~~iv 90 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRLA--DGTLVAVKRLKEERTQG-------------GELQFQTEVEMISMAVHRNLL 90 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECCS--SSCCEEEEECCC------------------CCCHHHHHHHGGGTCCCTTBC
T ss_pred HHHhhccccceeEecCCCcEEEEEEec--CCCEEEEEEeccccCch-------------HHHHHHHHHHHHHhccCCCcc
Confidence 456789999999999999999999754 78999999986543211 023588999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++...+..++||||+++|+|.+++.........+++..+..++.|++.||+|||..+..+|+||||||+||+++++
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~ 170 (326)
T 3uim_A 91 RLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170 (326)
T ss_dssp CCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred ceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence 99999999999999999999999999998765556679999999999999999999976555699999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCccccc-ccccchHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQ-HTEEMSLV 571 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~-~~~~~~~~ 571 (633)
+.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||+.... ........
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 249 (326)
T 3uim_A 171 FEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249 (326)
T ss_dssp CCEEECCCSSCEECCSSSSCE-ECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHH
T ss_pred CCEEeccCccccccCcccccc-cccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHH
Confidence 999999999998776543332 2445699999999999888899999999999999999999999974322 23445567
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHh
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQ 630 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~ 630 (633)
+|+.............+.........+....+.+++.+||+.||++|||++|+++.|+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 250 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp HHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 77777777777777777777777788888999999999999999999999999999975
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.9e-45 Score=396.71 Aligned_cols=252 Identities=24% Similarity=0.333 Sum_probs=205.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+|+.||+|++...... ..+.+.+|+++|+.++|||||+++
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~-~tg~~~AiK~i~~~~~~--------------~~~~~~~Ei~il~~l~hpnIv~l~ 220 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTER-ATGNNFAAKFVMTPHES--------------DKETVRKEIQTMSVLRHPTLVNLH 220 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCSHH--------------HHHHHHHHHHHHHHTCCTTBCCEE
T ss_pred ccccEEEEEEeeccCeEEEEEEEC-CCCCEEEEEEEeccchh--------------hHHHHHHHHHHHHhCCCCCCCeEE
Confidence 368999999999999999999865 68999999998654311 145688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC--C
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD--M 493 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~--~ 493 (633)
+++.+.+..|+|||||+||+|.+++.. ....+++..+..++.||+.||+|| |+++|+||||||+|||++.+ +
T Consensus 221 ~~~~~~~~~~iv~E~~~gg~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~yl---H~~~iiHRDlKp~Nill~~~~~~ 294 (573)
T 3uto_A 221 DAFEDDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHM---HENNYVHLDLKPENIMFTTKRSN 294 (573)
T ss_dssp EEEECSSEEEEEEECCCCCBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSCC
T ss_pred EEEEECCEEEEEEeecCCCcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCChhhccccCCCCC
Confidence 999999999999999999999998864 234699999999999999999999 67899999999999999854 8
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKW 573 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~ 573 (633)
.+||+|||+|+.+..... ....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.. ......
T Consensus 295 ~vKl~DFG~a~~~~~~~~---~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~----~~~~~~- 366 (573)
T 3uto_A 295 ELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN----DDETLR- 366 (573)
T ss_dssp CEEECCCSSCEECCTTSE---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS----HHHHHH-
T ss_pred CEEEeeccceeEccCCCc---eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC----HHHHHH-
Confidence 999999999998765432 234579999999999999999999999999999999999999997532 122222
Q ss_pred HHHhhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 574 MRNVMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 574 ~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+.... ..... .... ....+.+|+.+||+.||++|||+.|+++
T Consensus 367 --~i~~~~~~~~~~----~~~~----~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 367 --NVKSCDWNMDDS----AFSG----ISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp --HHHTTCCCCCSG----GGTT----SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --HHHhCCCCCCcc----cccC----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 222211 11110 0011 1223778999999999999999999976
No 22
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=8.3e-44 Score=361.03 Aligned_cols=261 Identities=28% Similarity=0.437 Sum_probs=201.4
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|++.+.||+|+||.||+|+. +|+.||||++....... +..+++.+|++++++++||||+++
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~---~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hp~iv~~ 99 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW---HGSDVAVKILMEQDFHA------------ERVNEFLREVAIMKRLRHPNIVLF 99 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE---TTEEEEEEEECCCCCSH------------HHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE---CCCcEEEEEecCCCCCH------------HHHHHHHHHHHHHHhCCCCCEeeE
Confidence 457899999999999999999986 68899999986554321 114678899999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeCCCCCCCeEecCC
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPR--IIHRDLKPANVLLDDD 492 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~--ivH~Dikp~Nill~~~ 492 (633)
++++.+.+..++||||+++|+|.+++.... ....+++..++.++.|+++||+|| |+.+ |+||||||+||+++.+
T Consensus 100 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~L---H~~~~~ivH~Dikp~NIll~~~ 175 (309)
T 3p86_A 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYL---HNRNPPIVHRNLKSPNLLVDKK 175 (309)
T ss_dssp EEEECSTTCCEEEEECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHH---HTSSSCCCCTTCCGGGEEECTT
T ss_pred EEEEEECCceEEEEecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHH---HcCCCCEECCCCChhhEEEeCC
Confidence 999999999999999999999999997522 123489999999999999999999 6677 9999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 176 ~~~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~----~~~~~ 249 (309)
T 3p86_A 176 YTVKVCDFGLSRLKASTFL--SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP----AQVVA 249 (309)
T ss_dssp CCEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH----HHHHH
T ss_pred CcEEECCCCCCcccccccc--ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHH
Confidence 9999999999986544322 12345799999999999999999999999999999999999999975322 12222
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
.+............ ....+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 250 ~~~~~~~~~~~~~~------------~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 250 AVGFKCKRLEIPRN------------LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp HHHHSCCCCCCCTT------------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCcc------------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 22111111111111 1123778999999999999999999999998863
No 23
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-43 Score=359.33 Aligned_cols=259 Identities=25% Similarity=0.454 Sum_probs=209.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|...+.||+|+||.||+|.+. .+++.||+|++..... ...+.+.+|++++++++||||++++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~~va~K~~~~~~~--------------~~~~~~~~E~~~l~~l~hp~iv~~~ 73 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHR-ETGEVMVMKELIRFDE--------------ETQRTFLKEVKVMRCLEHPNVLKFI 73 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEET-TTCCEEEEEEESCCCH--------------HHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred hhHeeccceecCCCCEEEEEEEEC-CCCcEEEEEEeccCCH--------------HHHHHHHHHHHHHHhCCCcCcccEE
Confidence 467899999999999999999875 5789999998854321 1256789999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..++||||+++|+|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+
T Consensus 74 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~dlkp~Nil~~~~~~~ 147 (310)
T 3s95_A 74 GVLYKDKRLNFITEYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYL---HSMNIIHRDLNSHNCLVRENKNV 147 (310)
T ss_dssp EEEEETTEEEEEEECCTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEECTTSCE
T ss_pred EEEecCCeeEEEEEecCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCcCeEEECCCCCE
Confidence 9999999999999999999999999752 35699999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcce------------ecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCccccc
Q 006739 496 RIADFGLAKAMPDAQTHIT------------TSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQ 563 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~ 563 (633)
||+|||+++.......... .....||+.|+|||++.+..++.++||||||+++|||++|..|+.....
T Consensus 148 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~ 227 (310)
T 3s95_A 148 VVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLP 227 (310)
T ss_dssp EECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSC
T ss_pred EEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhh
Confidence 9999999987654332110 1145799999999999999999999999999999999999999875433
Q ss_pred ccc--cchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 564 HTE--EMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 564 ~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
... ............. ......+.+++.+||+.||++|||+.|+++.|++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~-----------------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 228 RTMDFGLNVRGFLDRYCP-----------------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp BCTTSSBCHHHHHHHTCC-----------------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHhhhhhccccccCC-----------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 221 1122222211111 111123778999999999999999999999999875
No 24
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=6.8e-44 Score=364.21 Aligned_cols=268 Identities=27% Similarity=0.341 Sum_probs=207.4
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|++.+.||+|+||.||+|++ .++.||||++..... ....+.+|+.++++++||||+++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~hpniv~~ 83 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQL---LNEYVAVKIFPIQDK---------------QSWQNEYEVYSLPGMKHENILQF 83 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEE---TTEEEEEEEECGGGH---------------HHHHHHHHHHTSTTCCCTTBCCE
T ss_pred chhhchhhheecccCceEEEEEEE---CCCEEEEEEeecCch---------------HHHHHHHHHHHHhcCCCCCchhh
Confidence 457899999999999999999987 579999999843210 13345669999999999999999
Q ss_pred ceeeecCCc----cEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC----------CeeeC
Q 006739 415 LAHMARPDC----HLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNP----------RIIHR 480 (633)
Q Consensus 415 ~~~~~~~~~----~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~----------~ivH~ 480 (633)
++++..... .++||||+++|+|.++++. ..+++..++.++.|+++||+|| |+. +|+||
T Consensus 84 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~L---H~~~~~l~~~~~~~ivH~ 155 (322)
T 3soc_A 84 IGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYL---HEDIPGLKDGHKPAISHR 155 (322)
T ss_dssp EEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHH---TCCEEEETTEEECEEECS
T ss_pred cceeccCCCCCceEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHH---HhhccccccccCCCEEeC
Confidence 999987543 6999999999999999975 3499999999999999999999 666 99999
Q ss_pred CCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccC-----CCCCccchHHHHHHHHHHHhCC
Q 006739 481 DLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTL-----KFTDKCDIYSFGVLLAVLVMGR 555 (633)
Q Consensus 481 Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~s~G~~l~elltg~ 555 (633)
||||+||+++.++.+||+|||+++...............||+.|+|||++.+. .++.++|||||||++|||++|+
T Consensus 156 Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~ 235 (322)
T 3soc_A 156 DIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRC 235 (322)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCC
Confidence 99999999999999999999999877655443333446799999999998863 4556889999999999999999
Q ss_pred CCCccccccccc---------chHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 556 LPSDDFFQHTEE---------MSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 556 ~p~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.||......... .....+........... .+.... ........+.+++.+||+.||++|||+.|+++
T Consensus 236 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 236 TAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRP-VLRDYW---QKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp TTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCC-CCCGGG---GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCC-Cccccc---cccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999754321110 01122222211111111 111110 11234456889999999999999999999999
Q ss_pred HHHhhh
Q 006739 627 MLSQIR 632 (633)
Q Consensus 627 ~l~~~~ 632 (633)
.|++++
T Consensus 312 ~L~~l~ 317 (322)
T 3soc_A 312 RITQMQ 317 (322)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999885
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.1e-43 Score=369.43 Aligned_cols=264 Identities=25% Similarity=0.377 Sum_probs=213.0
Q ss_pred hhcCcccccccccccCeeEEEEEecC------CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-C
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPG------SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-R 407 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~ 407 (633)
..++|++.+.||+|+||.||+|++.+ .++..||||++...... +..+++.+|+++++++ +
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~~ 145 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-------------KDLSDLVSEMEMMKMIGK 145 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBH-------------HHHHHHHHHHHHHHHSCC
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCH-------------HHHHHHHHHHHHHHHhcC
Confidence 45789999999999999999998632 35678999998654321 1256789999999999 8
Q ss_pred CCcccccceeeecCCccEEEEecccCCCHHHHHhhhcC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 006739 408 HRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQ------------GRRELDWLARHKIALGVACGLEYLHISHNP 475 (633)
Q Consensus 408 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~ 475 (633)
||||+++++++.+.+..|+||||+++|+|.+++..... ....+++..++.++.||++||+|| |+.
T Consensus 146 hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~ 222 (370)
T 2psq_A 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 222 (370)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHH---HHT
T ss_pred CCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhC
Confidence 99999999999999999999999999999999986432 124589999999999999999999 678
Q ss_pred CeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-C
Q 006739 476 RIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-G 554 (633)
Q Consensus 476 ~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g 554 (633)
+|+||||||+|||++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |
T Consensus 223 ~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g 302 (370)
T 2psq_A 223 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 302 (370)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999997765443333344567899999999999999999999999999999999 9
Q ss_pred CCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 555 RLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 555 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
+.||.... ...+.+.+... .... .+......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 303 ~~p~~~~~----~~~~~~~~~~~---~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 303 GSPYPGIP----VEELFKLLKEG---HRMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp CCSSTTCC----GGGHHHHHHTT---CCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCC----HHHHHHHHhcC---CCCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 99987532 22232222221 1110 0111123478899999999999999999999999886
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=7.6e-43 Score=352.08 Aligned_cols=253 Identities=24% Similarity=0.351 Sum_probs=204.3
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
...++|+..+.||+|+||.||+|... .+++.||+|++....... .+.+.+|+.++++++||||++
T Consensus 17 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~--------------~~~~~~E~~~l~~l~hp~iv~ 81 (297)
T 3fxz_A 17 DPKKKYTRFEKIGQGASGTVYTAMDV-ATGQEVAIRQMNLQQQPK--------------KELIINEILVMRENKNPNIVN 81 (297)
T ss_dssp CGGGTBCCCEEEEEETTEEEEEEEBT-TTCCEEEEEEEEGGGCSC--------------HHHHHHHHHHHHHCCCTTBCC
T ss_pred ChhhceeeeeeeccCCCeEEEEEEEC-CCCcEEEEEEeecccccH--------------HHHHHHHHHHHhcCCCCCCCe
Confidence 34578999999999999999999854 578999999985432110 345788999999999999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++...+..++||||+++|+|.+++.. ..+++..+..++.|++.||+|| |+.+|+||||||+||+++.++
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~Dlkp~Nil~~~~~ 153 (297)
T 3fxz_A 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDG 153 (297)
T ss_dssp EEEEEEETTEEEEEEECCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTC
T ss_pred EeEEEEECCEEEEEEECCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHH---HhCCceeCCCCHHHEEECCCC
Confidence 99999999999999999999999999975 3589999999999999999999 678999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKW 573 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~ 573 (633)
.+||+|||++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......
T Consensus 154 ~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~~~ 228 (297)
T 3fxz_A 154 SVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP---LRALYLI 228 (297)
T ss_dssp CEEECCCTTCEECCSTTCC--BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHHHH
T ss_pred CEEEeeCCCceecCCcccc--cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHH
Confidence 9999999999877654332 2346799999999999999999999999999999999999999965321 1111111
Q ss_pred HHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 574 MRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 574 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
........... ......+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~------------~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 229 ATNGTPELQNP------------EKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHHCSCCCSCG------------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HhCCCCCCCCc------------cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11110000001 111233778999999999999999999975
No 27
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.7e-42 Score=350.15 Aligned_cols=270 Identities=34% Similarity=0.540 Sum_probs=214.7
Q ss_pred cccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccceeeec
Q 006739 341 SLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMAR 420 (633)
Q Consensus 341 ~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 420 (633)
..+.||+|+||.||+|.. +++.||||++......... +..+.+.+|+.++++++||||+++++++.+
T Consensus 35 ~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~----------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 101 (307)
T 2nru_A 35 GGNKMGEGGFGVVYKGYV---NNTTVAVKKLAAMVDITTE----------ELKQQFDQEIKVMAKCQHENLVELLGFSSD 101 (307)
T ss_dssp TCCEEEECSSEEEEEEES---SSCEEEEEEECCCTTSCTT----------THHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCccccCCCeEEEEEEE---CCceEEEEEEecccCcchH----------HHHHHHHHHHHHHHhcCCCCeEEEEEEEec
Confidence 348999999999999986 6889999998654321110 114678899999999999999999999999
Q ss_pred CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceEEccc
Q 006739 421 PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADF 500 (633)
Q Consensus 421 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~kl~Df 500 (633)
.+..++||||+++++|.+++..... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~Df 177 (307)
T 2nru_A 102 GDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFL---HENHHIHRDIKSANILLDEAFTAKISDF 177 (307)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCCEEECCC
T ss_pred CCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEcCCCcEEEeec
Confidence 9999999999999999999975432 45699999999999999999999 6789999999999999999999999999
Q ss_pred ccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHHHhhcc
Q 006739 501 GLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNVMTS 580 (633)
Q Consensus 501 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 580 (633)
|+++...............||+.|+|||.+.+ .++.++||||||+++|||++|+.||...........+ .......
T Consensus 178 g~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~ 253 (307)
T 2nru_A 178 GLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI---KEEIEDE 253 (307)
T ss_dssp TTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH---HHHHHTT
T ss_pred ccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH---HHHhhhh
Confidence 99987765443333345679999999998865 5889999999999999999999999865433222222 2222221
Q ss_pred C-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 581 E-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 581 ~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
. .....++..+ ..........+.+++.+||+.||.+|||++++++.|++++
T Consensus 254 ~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 254 EKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp SCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred hhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 1 1122222222 2345566777999999999999999999999999999885
No 28
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.9e-43 Score=356.73 Aligned_cols=249 Identities=25% Similarity=0.359 Sum_probs=203.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
..+|++.+.||+|+||.||+|++. .+|+.||||++....... ...+.+.+|+++++.++||||++++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hpnIv~l~ 80 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHI-LTGREVAIKIIDKTQLNP------------TSLQKLFREVRIMKILNHPNIVKLF 80 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGGSCH------------HHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhhcCCH------------HHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 468999999999999999999864 578999999986433211 1145688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++...+..++||||+++|+|.+++... ..+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+
T Consensus 81 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~NIll~~~~~~ 153 (328)
T 3fe3_A 81 EVIETEKTLYLIMEYASGGEVFDYLVAH----GRMKEKEARSKFRQIVSAVQYC---HQKRIVHRDLKAENLLLDADMNI 153 (328)
T ss_dssp EEEECSSEEEEEECCCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCE
T ss_pred EEEEECCEEEEEEECCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH---HHCCEeccCCCHHHEEEcCCCCE
Confidence 9999999999999999999999999763 4589999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCC-CccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFT-DKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
||+|||+++....... .....||+.|+|||++.+..++ .++||||+||++|||++|+.||++.. ...+ .
T Consensus 154 kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~---~ 223 (328)
T 3fe3_A 154 KIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN----LKEL---R 223 (328)
T ss_dssp EECSTTCCGGGSSSCG---GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHH---H
T ss_pred EEeeccCceecCCCCc---cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC----HHHH---H
Confidence 9999999987655432 2346799999999999888875 78999999999999999999997532 1122 2
Q ss_pred HHhhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 575 RNVMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
....... ..+..+ ...+.+++.+||+.||.+|||++|+++
T Consensus 224 ~~i~~~~~~~p~~~------------s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 224 ERVLRGKYRIPFYM------------STDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp HHHHHCCCCCCTTS------------CHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred HHHHhCCCCCCCCC------------CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2222211 111111 123678899999999999999999975
No 29
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.1e-42 Score=352.49 Aligned_cols=265 Identities=25% Similarity=0.413 Sum_probs=202.1
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
...++|.+.+.||+|+||.||+|++ ...+|+|.++...... ...+.+.+|++++++++||||++
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~----~~~~avk~~k~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~ 96 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKW----HGDVAVKILKVVDPTP------------EQFQAFRNEVAVLRKTRHVNILL 96 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEES----SSEEEEEECCCSSCCH------------HHHHHHHHHHHHHTTCCCTTBCC
T ss_pred ecccceEEEeEecCCCCeEEEEEEE----CCEEEEEEEecCCCCH------------HHHHHHHHHHHHHHhCCCCCEEE
Confidence 3457899999999999999999975 3358999886543321 11567889999999999999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++. .+..++||||+++++|.+++.. ....+++..+..++.|+++||+|| |+.+|+||||||+||++++++
T Consensus 97 ~~~~~~-~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~ 169 (307)
T 3lb7_A 97 FMGYMT-KDNLAIVTQWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYL---HAKNIIHRDMKSNNIFLHEGL 169 (307)
T ss_dssp EEEEEC-SSSCEEEEECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCSSSEEECTTS
T ss_pred EEEEEc-cCcEEEEEecCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHH---HhCCEeeCCCChhhEEEcCCC
Confidence 999875 4568999999999999999974 245699999999999999999999 677999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccc---cCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQ---TLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSL 570 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~ 570 (633)
.+||+|||+++...............||+.|+|||++. +..++.++|||||||++|||++|+.||..... ....
T Consensus 170 ~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~---~~~~ 246 (307)
T 3lb7_A 170 TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN---RDQI 246 (307)
T ss_dssp CEEECCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC---HHHH
T ss_pred CEEEccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc---HHHH
Confidence 99999999998655432222234457999999999886 56788899999999999999999999975432 1122
Q ss_pred HHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhhC
Q 006739 571 VKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIRH 633 (633)
Q Consensus 571 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~~ 633 (633)
...+........... + .......+.+++..||+.||++||++.|+++.|+.+++
T Consensus 247 ~~~~~~~~~~~~~~~-----~----~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 247 IFMVGRGYASPDLSK-----L----YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp HHHHHHTCCCCCSTT-----S----CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCcchhh-----h----hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 222221111111110 1 11112347888999999999999999999999998753
No 30
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.6e-43 Score=358.38 Aligned_cols=252 Identities=25% Similarity=0.391 Sum_probs=196.6
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
...+.|++.+.||+|+||.||+|++. .+|+.||||++....... ....+.+|++++++++||||++
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~-~~~~~vAiK~~~~~~~~~-------------~~~~~~~Ei~~l~~l~hpnIv~ 72 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHI-LTGEMVAIKIMDKNTLGS-------------DLPRIKTEIEALKNLRHQHICQ 72 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEESSCC----------------CCHHHHHHHHHHTCCCTTBCC
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEEC-CCCCEEEEEEEEccccch-------------HHHHHHHHHHHHHhCCCCCEee
Confidence 34578999999999999999999864 578999999986654211 1346789999999999999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++.+.+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|| |+.+|+||||||+||++++++
T Consensus 73 l~~~~~~~~~~~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~ 145 (347)
T 3zgw_A 73 LYHVLETANKIFMVLEYCPGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYV---HSQGYAHRDLKPENLLFDEYH 145 (347)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTS
T ss_pred EEEEEEeCCEEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCccHHHEEEcCCC
Confidence 99999999999999999999999999975 34599999999999999999999 678999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKF-TDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
.+||+|||++.......... .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||++.. ....
T Consensus 146 ~~kL~DFG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~----~~~~-- 218 (347)
T 3zgw_A 146 KLKLIDFGLCAKPKGNKDYH-LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN----VMAL-- 218 (347)
T ss_dssp CEEECCCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS----HHHH--
T ss_pred CEEEEeccCcccccCCCCcc-ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC----HHHH--
Confidence 99999999988655433221 234579999999999988775 889999999999999999999997532 1122
Q ss_pred HHHHhhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
...+.... ..+..+ ...+.+++.+||+.||++|||++|+++
T Consensus 219 -~~~i~~~~~~~p~~~------------s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 219 -YKKIMRGKYDVPKWL------------SPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp -HHHHHHTCCCCCTTC------------CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHHcCCCCCCCCC------------CHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 22221111 111111 123677899999999999999999985
No 31
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=6.5e-43 Score=362.91 Aligned_cols=268 Identities=23% Similarity=0.343 Sum_probs=212.2
Q ss_pred hhhhcCcccccccccccCeeEEEEEe----cCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-C
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAEL----PGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-R 407 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~ 407 (633)
....++|++.+.||+|+||.||+|++ ...+++.||||++...... ...+.+.+|++++.++ +
T Consensus 18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~~ 84 (359)
T 3vhe_A 18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-------------SEHRALMSELKILIHIGH 84 (359)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH-------------HHHHHHHHHHHHHHHHCC
T ss_pred cccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCH-------------HHHHHHHHHHHHHHhhcC
Confidence 44568899999999999999999985 3356789999998654321 1146789999999999 7
Q ss_pred CCcccccceeeecCCc-cEEEEecccCCCHHHHHhhhcCC----------------------------------------
Q 006739 408 HRNLLPLLAHMARPDC-HLLVYEFMKNGSLQDILNDVSQG---------------------------------------- 446 (633)
Q Consensus 408 h~niv~l~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------- 446 (633)
||||+++++++.+.+. .++||||+++|+|.++++.....
T Consensus 85 hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (359)
T 3vhe_A 85 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSAS 164 (359)
T ss_dssp CTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------
T ss_pred CcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccc
Confidence 9999999999987654 89999999999999999864321
Q ss_pred ----------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceEEccccccc
Q 006739 447 ----------------------RRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 504 (633)
Q Consensus 447 ----------------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 504 (633)
...+++..++.++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 241 (359)
T 3vhe_A 165 SGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241 (359)
T ss_dssp -------------------CTTTTCBCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred cccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEEcCCCcEEEEecccee
Confidence 12289999999999999999999 67899999999999999999999999999998
Q ss_pred ccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHHHHHHHhhccCCc
Q 006739 505 AMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLVKWMRNVMTSENP 583 (633)
Q Consensus 505 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (633)
...............||+.|+|||++.+..++.++|||||||++|||++ |+.||..... .......+....... .
T Consensus 242 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~~~~~~~~~~~~~~~-~ 317 (359)
T 3vhe_A 242 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---DEEFCRRLKEGTRMR-A 317 (359)
T ss_dssp CTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC---SHHHHHHHHHTCCCC-C
T ss_pred eecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch---hHHHHHHHHcCCCCC-C
Confidence 7765544444455678999999999999999999999999999999998 9999875332 122222222111111 1
Q ss_pred chhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 584 TRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 584 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
... ....+.+++..||+.||++|||+.|+++.|+++.
T Consensus 318 ~~~------------~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 318 PDY------------TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp CTT------------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCC------------CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 111 1123778899999999999999999999999873
No 32
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.5e-42 Score=344.76 Aligned_cols=258 Identities=22% Similarity=0.385 Sum_probs=210.1
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|++.+.||+|+||.||+|.+. ++..||+|++...... .+++.+|++++.+++||||+++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~---------------~~~~~~E~~~l~~l~h~~i~~~ 68 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWK--GQYDVAVKMIKEGSMS---------------EDEFFQEAQTMMKLSHPKLVKF 68 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET--TTEEEEEEEECBTTBC---------------HHHHHHHHHHHHHCCCTTBCCE
T ss_pred chhheeeeeeeccCCCceEEEEEec--CceeEEEEEeccCCCc---------------HHHHHHHHHHHHhCCCCCEeeE
Confidence 4578999999999999999999875 6788999998654321 3457889999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+....++||||+++++|.+++... ...+++..++.++.|+++||+|| |+.+|+||||||+||+++.++.
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nil~~~~~~ 142 (268)
T 3sxs_A 69 YGVCSKEYPIYIVTEYISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFL---ESHQFIHRDLAARNCLVDRDLC 142 (268)
T ss_dssp EEEECSSSSEEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHH---HHTTEEESSCSGGGEEECTTCC
T ss_pred EEEEccCCceEEEEEccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCcCcceEEECCCCC
Confidence 99999999999999999999999999763 34589999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLVKW 573 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~ 573 (633)
+||+|||+++........ ......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||+.... ...
T Consensus 143 ~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~--- 214 (268)
T 3sxs_A 143 VKVSDFGMTRYVLDDQYV-SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN----SEV--- 214 (268)
T ss_dssp EEECCTTCEEECCTTCEE-ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH----HHH---
T ss_pred EEEccCccceecchhhhh-cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh----HHH---
Confidence 999999999877654322 2234456788999999998889999999999999999999 9999875322 111
Q ss_pred HHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhhC
Q 006739 574 MRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIRH 633 (633)
Q Consensus 574 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~~ 633 (633)
............ ... ....+.+++..||+.||++|||+.|+++.|+++++
T Consensus 215 ~~~~~~~~~~~~-------~~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 215 VLKVSQGHRLYR-------PHL---ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp HHHHHTTCCCCC-------CTT---SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred HHHHHcCCCCCC-------CCc---ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 111111111110 000 11237789999999999999999999999999853
No 33
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2e-43 Score=351.28 Aligned_cols=258 Identities=25% Similarity=0.379 Sum_probs=209.6
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
...++|+..+.||+|+||.||+|++. +++.||+|++...... .+++.+|++++++++||||++
T Consensus 7 i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~---------------~~~~~~E~~~l~~l~h~~i~~ 69 (269)
T 4hcu_A 7 IDPSELTFVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREGAMS---------------EEDFIEEAEVMMKLSHPKLVQ 69 (269)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEET--TTEEEEEEEECTTSBC---------------HHHHHHHHHHHHTCCCTTBCC
T ss_pred eChhhceeeheecCCCccEEEEEEec--CCCeEEEEEecccccC---------------HHHHHHHHHHHHhCCCCCEee
Confidence 34578999999999999999999875 6888999998754421 346889999999999999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++.+.+..++||||+++++|.+++... ...+++..++.++.|+++||+|| |+.+|+||||||+||+++.++
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~ 143 (269)
T 4hcu_A 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQ 143 (269)
T ss_dssp EEEEECSSSSEEEEEECCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECGGG
T ss_pred EEEEEecCCceEEEEEeCCCCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHH---HhCCeecCCcchheEEEcCCC
Confidence 999999999999999999999999999652 35689999999999999999999 678999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHHH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~ 572 (633)
.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||..... ....
T Consensus 144 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~----~~~~- 217 (269)
T 4hcu_A 144 VIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVV- 217 (269)
T ss_dssp CEEECCTTGGGGBCCHHHH-STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHH-
T ss_pred CEEeccccccccccccccc-cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH----HHHH-
Confidence 9999999999876543211 1233457888999999998999999999999999999999 9999875321 1222
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
........... .......+.+++..||+.||++|||++|+++.|++++
T Consensus 218 --~~~~~~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 218 --EDISTGFRLYK----------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp --HHHHTTCCCCC----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHHhcCccCCC----------CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 22211111100 0011233788999999999999999999999999875
No 34
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.9e-43 Score=367.37 Aligned_cols=263 Identities=22% Similarity=0.334 Sum_probs=210.4
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|+..+.||+|+||.||+|++. .+++.||||.+...... ....++.+|++++++++||||+
T Consensus 110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~hpniv 175 (377)
T 3cbl_A 110 VLNHEDLVLGEQIGRGNFGEVFSGRLR-ADNTLVAVKSCRETLPP-------------DLKAKFLQEARILKQYSHPNIV 175 (377)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEECCTTSCH-------------HHHTTTTHHHHHHTTCCCTTBC
T ss_pred EEchHHeEEeeEeccCCCCeEEEEEEe-cCCeEEEEEEccccCCH-------------HHHHHHHHHHHHHHhCCCCCEE
Confidence 345578999999999999999999875 47899999998643211 1145688999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++...+..++||||+++|+|.+++... +..+++..+..++.|+++||+|| |+.+|+||||||+|||++.+
T Consensus 176 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nil~~~~ 249 (377)
T 3cbl_A 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYL---ESKCCIHRDLAARNCLVTEK 249 (377)
T ss_dssp CEEEEECSSSSCEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTT
T ss_pred EEEEEEecCCCcEEEEEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH---HHCCcCCcccCHHHEEEcCC
Confidence 9999999999999999999999999999753 34589999999999999999999 67899999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~ 571 (633)
+.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||..... ....
T Consensus 250 ~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~----~~~~ 325 (377)
T 3cbl_A 250 NVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN----QQTR 325 (377)
T ss_dssp CCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH----HHHH
T ss_pred CcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHH
Confidence 9999999999987544322111122345778999999998889999999999999999998 9999875322 2222
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
+.+.. ..... .+......+.+++.+||+.||++|||++++++.|++++
T Consensus 326 ~~~~~---~~~~~----------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 326 EFVEK---GGRLP----------CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp HHHHT---TCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHc---CCCCC----------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 22221 11111 00111234778999999999999999999999999985
No 35
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2e-42 Score=348.52 Aligned_cols=263 Identities=24% Similarity=0.431 Sum_probs=205.7
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++........ ...+.+.+|+.++++++||||++++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~hp~iv~~~ 77 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDT-ILNIKVAIKAIFIPPREKE-----------ETLKRFEREVHNSSQLSHQNIVSMI 77 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEET-TTCSEEEEEEEECCSSCCH-----------HHHHHHHHHHHHHTTCCBTTBCCEE
T ss_pred hccEEEEEEEccCCCEEEEEEEEC-CCCCeEEEEEeccCccccH-----------HHHHHHHHHHHHHhcCCCCCCceEE
Confidence 467999999999999999999864 5789999999865543211 1256789999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..++||||+++++|.+++... ..+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+
T Consensus 78 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~Dlkp~Nil~~~~~~~ 150 (294)
T 4eqm_A 78 DVDEEDDCYYLVMEYIEGPTLSEYIESH----GPLSVDTAINFTNQILDGIKHA---HDMRIVHRDIKPQNILIDSNKTL 150 (294)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCE
T ss_pred EeeeeCCeEEEEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCE
Confidence 9999999999999999999999999763 4689999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
||+|||+++........ ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||...... ....
T Consensus 151 kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~ 222 (294)
T 4eqm_A 151 KIFDFGIAKALSETSLT-QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-------SIAI 222 (294)
T ss_dssp EECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-------HHHH
T ss_pred EEEeCCCcccccccccc-ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHH
Confidence 99999999876543322 223457999999999999999999999999999999999999999753211 1111
Q ss_pred HhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCC-CHHHHHHHHHhh
Q 006739 576 NVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERP-NSKDVRCMLSQI 631 (633)
Q Consensus 576 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-s~~ev~~~l~~~ 631 (633)
.......+. ..... .......+.+++.+|++.||.+|| +++++.+.|+++
T Consensus 223 ~~~~~~~~~--~~~~~----~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 223 KHIQDSVPN--VTTDV----RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHHSSCCCC--HHHHS----CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred HHhhccCCC--cchhc----ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 111111111 11111 111223478899999999999999 999999999875
No 36
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=9.4e-43 Score=362.01 Aligned_cols=264 Identities=23% Similarity=0.358 Sum_probs=208.7
Q ss_pred hcCcccccccccccCeeEEEEEecC----CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNL 411 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 411 (633)
.++|++.+.||+|+||.||+|++.+ .+++.||||++...... ....++.+|+.++++++||||
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~hpnI 136 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-------------QDELDFLMEALIISKFNHQNI 136 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCH-------------HHHHHHHHHHHHHHHCCCTTB
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccCh-------------hhHHHHHHHHHHHHhCCCCCC
Confidence 4678999999999999999998632 36779999998643221 114468889999999999999
Q ss_pred cccceeeecCCccEEEEecccCCCHHHHHhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeE
Q 006739 412 LPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQ---GRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVL 488 (633)
Q Consensus 412 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nil 488 (633)
+++++++.+....++||||+++|+|.+++..... ....+++..++.++.||++||+|| |+.+|+||||||+|||
T Consensus 137 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIl 213 (367)
T 3l9p_A 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL---EENHFIHRDIAARNCL 213 (367)
T ss_dssp CCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEE
T ss_pred CeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChhhEE
Confidence 9999999999999999999999999999986542 234589999999999999999999 6789999999999999
Q ss_pred ecCCC---ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccc
Q 006739 489 LDDDM---EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQH 564 (633)
Q Consensus 489 l~~~~---~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~ 564 (633)
++.++ .+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 214 l~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~-- 291 (367)
T 3l9p_A 214 LTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-- 291 (367)
T ss_dssp ESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--
T ss_pred EecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--
Confidence 99555 599999999986543322222234568999999999999999999999999999999998 999986532
Q ss_pred cccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 565 TEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
...+.+.+. ....... .......+.+++.+||+.||++|||+.++++.|+.++
T Consensus 292 --~~~~~~~i~---~~~~~~~----------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 292 --NQEVLEFVT---SGGRMDP----------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp --HHHHHHHHH---TTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHH---cCCCCCC----------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 222222222 2111110 0111223778999999999999999999999998764
No 37
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-43 Score=361.92 Aligned_cols=267 Identities=24% Similarity=0.390 Sum_probs=212.9
Q ss_pred hhhhcCcccccccccccCeeEEEEEecC----CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRH 408 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h 408 (633)
....++|++.+.||+|+||.||+|++.+ .+++.||+|++...... ...+.+.+|+.++++++|
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h 109 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA-------------DMQADFQREAALMAEFDN 109 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCH-------------HHHHHHHHHHHHHHTCCC
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCH-------------HHHHHHHHHHHHHHhCCC
Confidence 3456789999999999999999998853 35689999998654321 125678999999999999
Q ss_pred CcccccceeeecCCccEEEEecccCCCHHHHHhhhcCC--------------------CCCCCHHHHHHHHHHHHHHHHH
Q 006739 409 RNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQG--------------------RRELDWLARHKIALGVACGLEY 468 (633)
Q Consensus 409 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~~L~~ 468 (633)
|||+++++++.+.+..++||||+++|+|.+++...... ...+++..++.++.||++||+|
T Consensus 110 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~ 189 (343)
T 1luf_A 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAY 189 (343)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999864321 2579999999999999999999
Q ss_pred HHhcCCCCeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHH
Q 006739 469 LHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLL 548 (633)
Q Consensus 469 Lh~~h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l 548 (633)
| |+.+|+||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++
T Consensus 190 L---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 266 (343)
T 1luf_A 190 L---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 266 (343)
T ss_dssp H---HHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred H---HhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHH
Confidence 9 6789999999999999999999999999999876544332233445689999999999988999999999999999
Q ss_pred HHHHh-CCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHH
Q 006739 549 AVLVM-GRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCM 627 (633)
Q Consensus 549 ~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~ 627 (633)
|||++ |+.||..... ......+ ....... .+......+.+++.+||+.||++|||+.++++.
T Consensus 267 ~el~t~g~~p~~~~~~----~~~~~~~---~~~~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~ 329 (343)
T 1luf_A 267 WEIFSYGLQPYYGMAH----EEVIYYV---RDGNILA----------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329 (343)
T ss_dssp HHHHTTTCCTTTTSCH----HHHHHHH---HTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhcCCCcCCCCCh----HHHHHHH---hCCCcCC----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 99999 9999875321 2222222 2211110 001112347889999999999999999999999
Q ss_pred HHhhh
Q 006739 628 LSQIR 632 (633)
Q Consensus 628 l~~~~ 632 (633)
|+++.
T Consensus 330 L~~~~ 334 (343)
T 1luf_A 330 LQRMC 334 (343)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 99874
No 38
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.5e-42 Score=349.27 Aligned_cols=275 Identities=19% Similarity=0.257 Sum_probs=211.7
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|++.+.||+|+||.||+|+.. .+++.||||++....... ..+.+.+|++++++++||||++++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~h~~iv~~~ 73 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLR-------------PVDVQMREFEVLKKLNHKNIVKLF 73 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECGGGGGS-------------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEEC-CCCcEEEEEEeccccccc-------------hHHHHHHHHHHHHhcCCCCcceEE
Confidence 467899999999999999999875 468999999985422110 135677899999999999999999
Q ss_pred eeeecCC--ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe----
Q 006739 416 AHMARPD--CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL---- 489 (633)
Q Consensus 416 ~~~~~~~--~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill---- 489 (633)
+++.... ..++||||+++++|.+++..... ...+++..++.++.|+++||+|| |+.+|+||||||+||++
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~ 149 (319)
T 4euu_A 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGE 149 (319)
T ss_dssp EEEECTTTCCEEEEEECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEECT
T ss_pred EEeecCCCceEEEEEeCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEEeccC
Confidence 9987655 67999999999999999986432 34499999999999999999999 67899999999999999
Q ss_pred cCCCceEEcccccccccCCCCCcceecccccCcccccccccc--------cCCCCCccchHHHHHHHHHHHhCCCCCccc
Q 006739 490 DDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQ--------TLKFTDKCDIYSFGVLLAVLVMGRLPSDDF 561 (633)
Q Consensus 490 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~s~G~~l~elltg~~p~~~~ 561 (633)
+.++.+||+|||+++........ ....||+.|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 150 ~~~~~~kL~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 226 (319)
T 4euu_A 150 DGQSVYKLTDFGAARELEDDEQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (319)
T ss_dssp TSCEEEEECCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred CCCceEEEccCCCceecCCCCce---eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 78888999999999887654332 2356999999999886 567899999999999999999999999764
Q ss_pred ccccccchHHHHHHHhhccCCcchh---------hhhh--hhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHh
Q 006739 562 FQHTEEMSLVKWMRNVMTSENPTRA---------IDAK--LLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQ 630 (633)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~d~~--~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~ 630 (633)
............+............ .... ............+.+++.+||+.||++|||++|+++...+
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp TCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred CccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 4333322222222111111100000 0000 0112335566678899999999999999999999998876
Q ss_pred h
Q 006739 631 I 631 (633)
Q Consensus 631 ~ 631 (633)
-
T Consensus 307 ~ 307 (319)
T 4euu_A 307 I 307 (319)
T ss_dssp H
T ss_pred H
Confidence 4
No 39
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.7e-43 Score=364.76 Aligned_cols=262 Identities=23% Similarity=0.386 Sum_probs=197.8
Q ss_pred hhhcCcccccccccccCeeEEEEEec--CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELP--GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNL 411 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 411 (633)
...++|++.+.||+|+||.||+|++. ..++..||||++...... ...+++.+|+.++++++||||
T Consensus 42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~ni 108 (373)
T 2qol_A 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-------------KQRRDFLGEASIMGQFDHPNI 108 (373)
T ss_dssp CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCH-------------HHHHHHHHHHHHHTTCCCTTB
T ss_pred cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCH-------------HHHHHHHHHHHHHHhCCCCCC
Confidence 34568999999999999999999864 235778999998654311 125678999999999999999
Q ss_pred cccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC
Q 006739 412 LPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD 491 (633)
Q Consensus 412 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~ 491 (633)
+++++++.+.+..++||||+++|+|.++++. ....+++..+..++.||++||+|| |+.+|+||||||+||+++.
T Consensus 109 v~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~ 182 (373)
T 2qol_A 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 182 (373)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECT
T ss_pred CeEEEEEeeCCceEEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCcceEEEcC
Confidence 9999999999999999999999999999975 245699999999999999999999 6789999999999999999
Q ss_pred CCceEEcccccccccCCCCCcc-eecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccch
Q 006739 492 DMEARIADFGLAKAMPDAQTHI-TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMS 569 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~ 569 (633)
++.+||+|||+++......... ......+|..|+|||++.+..++.++|||||||++|||++ |+.||..... ..
T Consensus 183 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~----~~ 258 (373)
T 2qol_A 183 NLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----QD 258 (373)
T ss_dssp TCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH----HH
T ss_pred CCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH----HH
Confidence 9999999999998775543211 1122345788999999999999999999999999999998 9999865321 22
Q ss_pred HHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 570 LVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
+.+.+....... ........+.+++.+||+.||++||++.+++++|+++
T Consensus 259 ~~~~i~~~~~~~-------------~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 259 VIKAVDEGYRLP-------------PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp HHHHHHTTEECC-------------CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCC-------------CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 222222111110 0111223478899999999999999999999999886
No 40
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-42 Score=347.73 Aligned_cols=255 Identities=25% Similarity=0.435 Sum_probs=197.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||++++ .++.||+|++.... ..+.+.+|++++++++||||++++
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~----------------~~~~~~~E~~~l~~l~hp~iv~~~ 67 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKW---RAKDVAIKQIESES----------------ERKAFIVELRQLSRVNHPNIVKLY 67 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE---TTEEEEEEECSSTT----------------HHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred HhHeeeeeEeecCCCceEEEEEE---CCeeEEEEEecChh----------------HHHHHHHHHHHHhcCCCCCcCeEE
Confidence 46788999999999999999987 57899999985322 145788999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc-
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME- 494 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~- 494 (633)
+++.+ ..++||||+++|+|.+++.... ....+++..++.++.|+++||+|||..|..+|+||||||+||+++.++.
T Consensus 68 ~~~~~--~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 144 (307)
T 2eva_A 68 GACLN--PVCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 144 (307)
T ss_dssp EBCTT--TTEEEEECCTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTE
T ss_pred EEEcC--CcEEEEEcCCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCE
Confidence 98874 4899999999999999997532 1235789999999999999999997666689999999999999998886
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||+..... .. +..
T Consensus 145 ~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~---~~~ 214 (307)
T 2eva_A 145 LKICDFGTACDIQTHM-----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP--AF---RIM 214 (307)
T ss_dssp EEECCCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS--HH---HHH
T ss_pred EEEccccccccccccc-----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc--HH---HHH
Confidence 7999999997654321 2346899999999999999999999999999999999999999753221 11 111
Q ss_pred HHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 575 RNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 575 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
.......... .... ....+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 215 ~~~~~~~~~~------~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 215 WAVHNGTRPP------LIKN----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp HHHHTTCCCC------CBTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred HHHhcCCCCC------cccc----cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 1111111111 0011 1223778999999999999999999999998874
No 41
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=8.5e-43 Score=356.36 Aligned_cols=261 Identities=24% Similarity=0.372 Sum_probs=206.7
Q ss_pred hcCcccccccccccCeeEEEEEecC--CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPG--SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
.++|++.+.||+|+||.||+|++.. ..+..||||++...... ...+.+.+|+.++++++||||++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~ 114 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE-------------RQRRDFLSEASIMGQFDHPNIIR 114 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCH-------------HHHHHHHHHHHHHTTCCCTTBCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCH-------------HHHHHHHHHHHHHHhCCCCCCCc
Confidence 4678999999999999999998742 24456999998654321 11467889999999999999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++.+.+..++||||+++|+|.+++... ...+++..++.++.|++.||+|| |+.+|+||||||+||+++.++
T Consensus 115 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~ 188 (325)
T 3kul_A 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNL 188 (325)
T ss_dssp EEEEECGGGCCEEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTC
T ss_pred EEEEEEeCCccEEEeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCcceEEECCCC
Confidence 999999999999999999999999999642 35699999999999999999999 678999999999999999999
Q ss_pred ceEEcccccccccCCCCCcc-eecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHH
Q 006739 494 EARIADFGLAKAMPDAQTHI-TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~ 571 (633)
.+||+|||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ....
T Consensus 189 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~----~~~~ 264 (325)
T 3kul_A 189 VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN----RDVI 264 (325)
T ss_dssp CEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH----HHHH
T ss_pred CEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH----HHHH
Confidence 99999999999876543221 2233456889999999998899999999999999999999 9999865322 2222
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
..+. ....... .......+.+++..||+.||++|||+.++++.|+.+.
T Consensus 265 ~~~~---~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 265 SSVE---EGYRLPA----------PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp HHHH---TTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHH---cCCCCCC----------CCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 2221 1111110 1111234788999999999999999999999998863
No 42
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-42 Score=360.19 Aligned_cols=265 Identities=27% Similarity=0.376 Sum_probs=213.7
Q ss_pred hhhcCcccccccccccCeeEEEEEecC------CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPG------SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI- 406 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l- 406 (633)
...++|.+.+.||+|+||.||+|++.+ .++..||||++...... +...++.+|+++++++
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~ 132 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-------------KDLSDLISEMEMMKMIG 132 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCH-------------HHHHHHHHHHHHHHHHC
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCH-------------HHHHHHHHHHHHHHHhc
Confidence 345789999999999999999998642 34478999998654321 1146788999999999
Q ss_pred CCCcccccceeeecCCccEEEEecccCCCHHHHHhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 006739 407 RHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQG------------RRELDWLARHKIALGVACGLEYLHISHN 474 (633)
Q Consensus 407 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~ 474 (633)
+||||+++++++...+..++||||+++|+|.+++...... ...+++..++.++.|+++||+|| |+
T Consensus 133 ~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~ 209 (382)
T 3tt0_A 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---AS 209 (382)
T ss_dssp CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHH---HH
T ss_pred CCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHH---Hh
Confidence 8999999999999999999999999999999999864321 24599999999999999999999 67
Q ss_pred CCeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-
Q 006739 475 PRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM- 553 (633)
Q Consensus 475 ~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt- 553 (633)
.+|+||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++
T Consensus 210 ~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~ 289 (382)
T 3tt0_A 210 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 289 (382)
T ss_dssp TTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999987765443333345567899999999999999999999999999999999
Q ss_pred CCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 554 GRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 554 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
|+.||.... ...+.+.+.. ...... .......+.+++.+||+.||++|||++|+++.|+++
T Consensus 290 g~~p~~~~~----~~~~~~~~~~---~~~~~~----------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 290 GGSPYPGVP----VEELFKLLKE---GHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp SCCSSTTCC----HHHHHHHHHT---TCCCCC----------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCC----HHHHHHHHHc---CCCCCC----------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 999986532 2222222222 111110 011123478899999999999999999999999886
No 43
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=5.2e-42 Score=354.39 Aligned_cols=258 Identities=25% Similarity=0.322 Sum_probs=206.0
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|++.+.||+|+||.||+|+.. .+|+.||+|++............ ..+.+.+|+.++++++||||++++
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~-~~~~~~avK~i~~~~~~~~~~~~--------~~~~~~~E~~il~~l~hpnIv~l~ 81 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREK-STGLEYAAKFIKKRQSRASRRGV--------CREEIEREVSILRQVLHPNIITLH 81 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEBCSSTTCSSSB--------CHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEEC-CCCCEEEEEEEEccccccccchh--------HHHHHHHHHHHHHhCCCcCCCcEE
Confidence 467999999999999999999865 57899999998765432211000 035688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC--
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM-- 493 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~-- 493 (633)
+++.+.+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|| |+.+|+||||||+||+++.++
T Consensus 82 ~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~ 154 (361)
T 2yab_A 82 DVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYL---HTKKIAHFDLKPENIMLLDKNIP 154 (361)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCTTSS
T ss_pred EEEEeCCEEEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEeCCCCC
Confidence 999999999999999999999999964 45699999999999999999999 678999999999999998877
Q ss_pred --ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHH
Q 006739 494 --EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 494 --~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~ 571 (633)
.+||+|||+++....... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ....
T Consensus 155 ~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~----~~~~- 226 (361)
T 2yab_A 155 IPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT----KQET- 226 (361)
T ss_dssp SCCEEECCCSSCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS----HHHH-
T ss_pred ccCEEEEecCCceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC----HHHH-
Confidence 799999999988765432 234579999999999999999999999999999999999999996532 1122
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
...+...... .++...... ...+.+++.+||+.||++|||+.|+++
T Consensus 227 --~~~i~~~~~~---~~~~~~~~~----s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 227 --LANITAVSYD---FDEEFFSQT----SELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp --HHHHHTTCCC---CCHHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --HHHHHhcCCC---CCchhccCC----CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2222111110 011111111 233778999999999999999999874
No 44
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=7.1e-43 Score=357.49 Aligned_cols=260 Identities=23% Similarity=0.338 Sum_probs=201.5
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCe----EEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGK----MIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRN 410 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n 410 (633)
..++|+..+.||+|+||.||+|++.. +++ +||+|.+..... ....+++.+|+.++++++|||
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~~E~~~l~~l~h~~ 78 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATS-------------PKANKEILDEAYVMASVDNPH 78 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC-----CCEEEEEEEC--------------------CHHHHHHHHHHHHHCCBTT
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcC-CCceEEEEEEEeecccccC-------------HHHHHHHHHHHHHHHhCCCCC
Confidence 35689999999999999999998743 344 368887743211 112467889999999999999
Q ss_pred ccccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 411 LLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 411 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
|+++++++.+.. .++|+||+++|+|.+++... ...+++..++.++.|+++||+|| |+.+|+||||||+||+++
T Consensus 79 iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~Dikp~NIll~ 151 (327)
T 3poz_A 79 VCRLLGICLTST-VQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVK 151 (327)
T ss_dssp BCCEEEEEESSS-EEEEEECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEE
T ss_pred EeEEEEEEecCC-eEEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCChheEEEC
Confidence 999999998754 78999999999999999752 35699999999999999999999 677999999999999999
Q ss_pred CCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccch
Q 006739 491 DDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMS 569 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~ 569 (633)
.++.+||+|||+++...............||..|+|||++.+..++.++|||||||++|||++ |+.||+.... ..
T Consensus 152 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~ 227 (327)
T 3poz_A 152 TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA----SE 227 (327)
T ss_dssp ETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG----GG
T ss_pred CCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH----HH
Confidence 999999999999998765544333344567889999999999999999999999999999999 9999976422 22
Q ss_pred HHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 570 LVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
+.+.+........ .......+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 228 ~~~~~~~~~~~~~-------------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 228 ISSILEKGERLPQ-------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp HHHHHHTTCCCCC-------------CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCC-------------CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 3233222111110 1111234778999999999999999999999998763
No 45
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.1e-42 Score=348.90 Aligned_cols=267 Identities=24% Similarity=0.386 Sum_probs=204.0
Q ss_pred hcCcccccccccccCeeEEEEEe---cCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAEL---PGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
.++|++.+.||+|+||.||+|++ ...+++.||||++..... ...+.+.+|++++++++||||+
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~~iv 74 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE--------------EHLRDFEREIEILKSLQHDNIV 74 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCH--------------HHHHHHHHHHHHHHTCCCTTBC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCH--------------HHHHHHHHHHHHHHhCCCCCEe
Confidence 46889999999999999999985 345789999999864431 1146788999999999999999
Q ss_pred ccceeeec--CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 413 PLLAHMAR--PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 413 ~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
++++++.. ....++||||+++|+|.+++... ...+++..+..++.|++.||+|| |+.+|+||||||+||+++
T Consensus 75 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~ 148 (295)
T 3ugc_A 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 148 (295)
T ss_dssp CEEEEECHHHHTSCEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEE
T ss_pred eEEEEEecCCCCceEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHhhEEEc
Confidence 99999855 35689999999999999999763 34589999999999999999999 678999999999999999
Q ss_pred CCCceEEcccccccccCCCCCc-ceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccc-----
Q 006739 491 DDMEARIADFGLAKAMPDAQTH-ITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQH----- 564 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~----- 564 (633)
.++.+||+|||+++........ .......+|..|+|||.+.+..++.++||||||+++|||++|..|+......
T Consensus 149 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~ 228 (295)
T 3ugc_A 149 NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 228 (295)
T ss_dssp ETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHH
T ss_pred CCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhh
Confidence 9999999999999877544322 1223345788899999999999999999999999999999999998643210
Q ss_pred --c-ccchHH-HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 565 --T-EEMSLV-KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 565 --~-~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
. ...... ............. .+......+.+++.+||+.||++|||++|+++.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 229 GNDKQGQMIVFHLIELLKNNGRLP----------RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290 (295)
T ss_dssp CTTCCTHHHHHHHHHHHHTTCCCC----------CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCccccchhHHHHHHHHhccCcCC----------CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 0 000000 1111111111110 11122244788999999999999999999999999885
No 46
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.1e-42 Score=348.60 Aligned_cols=265 Identities=25% Similarity=0.379 Sum_probs=200.1
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhc--CCCCcccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQ--IRHRNLLP 413 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~ 413 (633)
.++|++.+.||+|+||.||+|++ +++.||||++.... ...+.+|.+++.. ++||||++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~-----------------~~~~~~e~~~~~~~~l~h~niv~ 66 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW---QGENVAVKIFSSRD-----------------EKSWFRETELYNTVMLRHENILG 66 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE---TTEEEEEEEECGGG-----------------HHHHHHHHHHHHHTCCCCTTBCC
T ss_pred cCcEEEEEeeccCCCcEEEEEEE---CCEEEEEEEecccc-----------------chhhHHHHHHHHHhhccCcCeee
Confidence 46899999999999999999987 68999999984321 2234445555554 79999999
Q ss_pred cceeeec----CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeeCCCCC
Q 006739 414 LLAHMAR----PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHIS-----HNPRIIHRDLKP 484 (633)
Q Consensus 414 l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~-----h~~~ivH~Dikp 484 (633)
+++++.. ....++||||+++|+|.++++. ..+++..++.++.|+++||+|||.. ++.+|+||||||
T Consensus 67 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp 141 (301)
T 3q4u_A 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKS 141 (301)
T ss_dssp EEEEEEEEETTEEEEEEEECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCG
T ss_pred EEEeeccccCCCceeEEehhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCCh
Confidence 9998654 3457899999999999999953 4699999999999999999999521 288999999999
Q ss_pred CCeEecCCCceEEcccccccccCCCCCcce--ecccccCcccccccccccC------CCCCccchHHHHHHHHHHHhC--
Q 006739 485 ANVLLDDDMEARIADFGLAKAMPDAQTHIT--TSNVAGTVGYIAPEYHQTL------KFTDKCDIYSFGVLLAVLVMG-- 554 (633)
Q Consensus 485 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~elltg-- 554 (633)
+||+++.++.+||+|||+++.......... .....||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 142 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~ 221 (301)
T 3q4u_A 142 KNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMV 221 (301)
T ss_dssp GGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhc
Confidence 999999999999999999987655433211 2234799999999999876 445689999999999999999
Q ss_pred --------CCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 555 --------RLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 555 --------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
+.||.......... ................ ... .........+.+++.+||+.||++|||+.|+++
T Consensus 222 ~~~~~~~~~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 222 SNGIVEDYKPPFYDVVPNDPSF--EDMRKVVCVDQQRPNI-PNR---WFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295 (301)
T ss_dssp BTTBCCCCCCTTTTTSCSSCCH--HHHHHHHTTSCCCCCC-CGG---GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred CccccccccccccccCCCCcch--hhhhHHHhccCCCCCC-Chh---hccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence 78876543322221 1111111111111111 110 012234556889999999999999999999999
Q ss_pred HHHhh
Q 006739 627 MLSQI 631 (633)
Q Consensus 627 ~l~~~ 631 (633)
.|++|
T Consensus 296 ~L~~i 300 (301)
T 3q4u_A 296 TLTKI 300 (301)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 99876
No 47
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.2e-41 Score=348.35 Aligned_cols=251 Identities=23% Similarity=0.319 Sum_probs=202.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|+..+.||+|+||.||+|+.. .+|+.||+|++.+... ........+.+|+.+++.++||||++++
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vaiK~~~~~~~-----------~~~~~~~~~~~E~~~l~~l~hp~iv~l~ 71 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVI-----------IAKDEVAHTVTESRVLQNTRHPFLTALK 71 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHH-----------HHTTCHHHHHHHHHHHHSCCCTTBCCEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEeHHHh-----------hhhhHHHHHHHHHHHHHhCCCCcCcceE
Confidence 367999999999999999999864 5789999999853210 0111245678899999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|| |+.+|+||||||+|||++.++.+
T Consensus 72 ~~~~~~~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~v 144 (337)
T 1o6l_A 72 YAFQTHDRLCFVMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYL---HSRDVVYRDIKLENLMLDKDGHI 144 (337)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCE
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCcCCHHHEEECCCCCE
Confidence 999999999999999999999999975 34689999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
||+|||+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ...+. .
T Consensus 145 kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~----~~~~~---~ 215 (337)
T 1o6l_A 145 KITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD----HERLF---E 215 (337)
T ss_dssp EECCCTTCBCSCCTTC--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS----HHHHH---H
T ss_pred EEeeccchhhcccCCC--cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC----HHHHH---H
Confidence 9999999986433222 2234679999999999999999999999999999999999999986532 11221 1
Q ss_pred Hhhcc-CCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCC-----CHHHHHH
Q 006739 576 NVMTS-ENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERP-----NSKDVRC 626 (633)
Q Consensus 576 ~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~ev~~ 626 (633)
.+... ...+..+ ...+.+++.+||+.||++|| +++|+++
T Consensus 216 ~i~~~~~~~p~~~------------s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 216 LILMEEIRFPRTL------------SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHHCCCCCCTTS------------CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHcCCCCCCCCC------------CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11111 1111111 12377889999999999999 8888865
No 48
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.5e-42 Score=353.24 Aligned_cols=266 Identities=24% Similarity=0.364 Sum_probs=213.3
Q ss_pred hhhhcCcccccccccccCeeEEEEEec----CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELP----GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRH 408 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h 408 (633)
....++|.+.+.||+|+||.||+|... ..+++.||+|++...... ...+.+.+|++++++++|
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h 85 (314)
T 2ivs_A 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP-------------SELRDLLSEFNVLKQVNH 85 (314)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCH-------------HHHHHHHHHHHHHTTCCC
T ss_pred ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCH-------------HHHHHHHHHHHHHhhCCC
Confidence 334578999999999999999999863 235689999998644311 114678899999999999
Q ss_pred CcccccceeeecCCccEEEEecccCCCHHHHHhhhcC--------------------CCCCCCHHHHHHHHHHHHHHHHH
Q 006739 409 RNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQ--------------------GRRELDWLARHKIALGVACGLEY 468 (633)
Q Consensus 409 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~~L~~ 468 (633)
|||+++++++.+.+..++||||+++|+|.+++..... ....+++..++.++.|+++||+|
T Consensus 86 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~ 165 (314)
T 2ivs_A 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQY 165 (314)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHH
T ss_pred CceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999986432 12348999999999999999999
Q ss_pred HHhcCCCCeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHH
Q 006739 469 LHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLL 548 (633)
Q Consensus 469 Lh~~h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l 548 (633)
| |+.+|+||||||+||+++.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++
T Consensus 166 l---H~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 242 (314)
T 2ivs_A 166 L---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242 (314)
T ss_dssp H---HHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred H---HHCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHH
Confidence 9 6789999999999999999999999999999877654433333445678899999999988899999999999999
Q ss_pred HHHHh-CCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHH
Q 006739 549 AVLVM-GRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCM 627 (633)
Q Consensus 549 ~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~ 627 (633)
|||++ |+.||..... ..+.+.+........ .......+.+++.+||+.||++|||+.|+++.
T Consensus 243 ~el~t~g~~p~~~~~~----~~~~~~~~~~~~~~~-------------~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 243 WEIVTLGGNPYPGIPP----ERLFNLLKTGHRMER-------------PDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp HHHHTTSCCSSTTCCG----GGHHHHHHTTCCCCC-------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhCCCCCCCCCCH----HHHHHHhhcCCcCCC-------------CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999 9999875322 223222222111110 01112347889999999999999999999999
Q ss_pred HHhh
Q 006739 628 LSQI 631 (633)
Q Consensus 628 l~~~ 631 (633)
|+++
T Consensus 306 l~~~ 309 (314)
T 2ivs_A 306 LEKM 309 (314)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9986
No 49
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.5e-42 Score=347.83 Aligned_cols=267 Identities=22% Similarity=0.326 Sum_probs=214.5
Q ss_pred hhhhcCcccccccccccCeeEEEEEe----cCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-C
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAEL----PGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-R 407 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~ 407 (633)
....++|+..+.||+|+||.||+|++ ...+++.||+|++...... ...+.+.+|+.+++++ +
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~~ 85 (313)
T 1t46_A 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-------------TEREALMSELKVLSYLGN 85 (313)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH-------------HHHHHHHHHHHHHHHHCC
T ss_pred ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhH-------------HHHHHHHHHHHHHhhccc
Confidence 34457899999999999999999986 3457889999998654321 1146788999999999 8
Q ss_pred CCcccccceeeecCCccEEEEecccCCCHHHHHhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 006739 408 HRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQ--------------GRRELDWLARHKIALGVACGLEYLHISH 473 (633)
Q Consensus 408 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h 473 (633)
||||+++++++...+..++||||+++|+|.+++..... ....+++..++.++.|+++||+|| |
T Consensus 86 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H 162 (313)
T 1t46_A 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---A 162 (313)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHH---H
T ss_pred CCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---H
Confidence 99999999999999999999999999999999986432 123589999999999999999999 6
Q ss_pred CCCeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh
Q 006739 474 NPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM 553 (633)
Q Consensus 474 ~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt 553 (633)
+.+|+||||||+||+++.++.+||+|||+++...............||+.|+|||.+.+..++.++||||||+++|||++
T Consensus 163 ~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt 242 (313)
T 1t46_A 163 SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242 (313)
T ss_dssp HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred HCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999988766544433345567889999999999999999999999999999999
Q ss_pred -CCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 554 -GRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 554 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
|+.||..... .....+.+........ .......+.+++.+||+.||.+|||+.|+++.|+++
T Consensus 243 ~g~~p~~~~~~---~~~~~~~~~~~~~~~~-------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 305 (313)
T 1t46_A 243 LGSSPYPGMPV---DSKFYKMIKEGFRMLS-------------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (313)
T ss_dssp TTCCSSTTCCS---SHHHHHHHHHTCCCCC-------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCcccc---hhHHHHHhccCCCCCC-------------cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 9999875432 1122222222111100 011123478899999999999999999999999876
No 50
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=4.4e-42 Score=357.07 Aligned_cols=280 Identities=17% Similarity=0.195 Sum_probs=210.2
Q ss_pred hhcCcccccccccccCeeEEEEEecCC----CCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGS----NGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRN 410 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n 410 (633)
..++|++.+.||+|+||.||+|.+... .++.||||++....... ..+...........+..|+..+..++|||
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~e~~~~~~~~~~~~~~e~~~~~~l~h~~ 109 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPL---FTELKFYQRAAKPEQIQKWIRTRKLKYLG 109 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHH---HHHHHHHHHHCCHHHHHHHHHHTTCSCCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhH---HHHHHHHHhhhhhHHHHHHHHHhhccCCC
Confidence 346899999999999999999987532 25889999986554211 11111111222345667888899999999
Q ss_pred ccccceeeecC----CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCC
Q 006739 411 LLPLLAHMARP----DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPAN 486 (633)
Q Consensus 411 iv~l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~N 486 (633)
|+++++++... ...++||||+ +++|.+++... ...+++..+..|+.||+.||+|| |+.+|+||||||+|
T Consensus 110 iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~l---H~~~iiHrDlkp~N 182 (364)
T 3op5_A 110 VPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYI---HEHEYVHGDIKASN 182 (364)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGG
T ss_pred CCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEEecCCHHH
Confidence 99999998764 4478999999 99999999752 35699999999999999999999 67799999999999
Q ss_pred eEec--CCCceEEcccccccccCCCCCcc-----eecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCc
Q 006739 487 VLLD--DDMEARIADFGLAKAMPDAQTHI-----TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSD 559 (633)
Q Consensus 487 ill~--~~~~~kl~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~ 559 (633)
||++ .++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~ 262 (364)
T 3op5_A 183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWE 262 (364)
T ss_dssp EEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999 88999999999998765432211 1123459999999999999999999999999999999999999998
Q ss_pred ccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 560 DFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
..... ........... .......++..+.....+ ..+.+++..||+.||++||+++++++.|+++
T Consensus 263 ~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 263 DNLKD---PKYVRDSKIRY-RENIASLMDKCFPAANAP---GEIAKYMETVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp GGTTC---HHHHHHHHHHH-HHCHHHHHHHHSCTTCCC---HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred ccccC---HHHHHHHHHHh-hhhHHHHHHHhcccccCH---HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 63321 12222222111 112233333333222222 3477888899999999999999999999876
No 51
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.1e-42 Score=352.96 Aligned_cols=255 Identities=24% Similarity=0.379 Sum_probs=201.7
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++...... ...+.+.+|+.+++.++||||++++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~hpnIv~~~ 71 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKRAV-------------DCPENIKKEICINKMLNHENVVKFY 71 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECC--------------------CHHHHHHHHHHCCCTTBCCEE
T ss_pred hhhceeeeEEecCCCEEEEEEEEC-CCCcEEEEEEEEccccc-------------chHHHHHHHHHHHHhCCCCCCCeEE
Confidence 468999999999999999999865 57899999998543211 1135678899999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..++||||+++|+|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+
T Consensus 72 ~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~ 144 (323)
T 3tki_A 72 GHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKPENLLLDERDNL 144 (323)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCE
T ss_pred EEEecCCeEEEEEEcCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccccchHHEEEeCCCCE
Confidence 999999999999999999999998864 45699999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKF-TDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
||+|||+++...............||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... .......+.
T Consensus 145 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~~~~ 222 (323)
T 3tki_A 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWK 222 (323)
T ss_dssp EECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT--TSHHHHHHH
T ss_pred EEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch--HHHHHHHHh
Confidence 9999999987654332222345679999999999987765 7789999999999999999999975432 112222222
Q ss_pred HHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 575 RNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.. ...... .......+.+++.+||+.||++|||+.|+++
T Consensus 223 ~~----~~~~~~---------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 223 EK----KTYLNP---------WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp TT----CTTSTT---------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cc----cccCCc---------cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11 100000 0111223678899999999999999999875
No 52
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.4e-42 Score=347.87 Aligned_cols=258 Identities=22% Similarity=0.350 Sum_probs=206.3
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|++.+.||+|+||.||++.+. ++..||+|++...... .+++.+|++++.+++||||+
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~---------------~~~~~~E~~~l~~l~h~~i~ 82 (283)
T 3gen_A 20 EIDPKDLTFLKELGTGQFGVVKYGKWR--GQYDVAIKMIKEGSMS---------------EDEFIEEAKVMMNLSHEKLV 82 (283)
T ss_dssp BCCGGGEEEEEECC---CEEEEEEEET--TTEEEEEEEECTTSBC---------------HHHHHHHHHHHHTCCCTTBC
T ss_pred cCCHHHHHhHhhcCCCCCceEEEEEEc--CCCeEEEEEecCCCCC---------------HHHHHHHHHHHhcCCCCCEe
Confidence 344578999999999999999999875 7788999998754321 34578899999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++.+.+..++||||+++++|.+++... ...+++..++.++.|+++||+|| |+.+|+||||||+||+++.+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nili~~~ 156 (283)
T 3gen_A 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQ 156 (283)
T ss_dssp CEEEEECSSSSEEEEECCCTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCSGGGEEECTT
T ss_pred eEEEEEecCCCeEEEEeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCccceEEEcCC
Confidence 9999999999999999999999999999753 34599999999999999999999 67899999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~ 571 (633)
+.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||..... ....
T Consensus 157 ~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~----~~~~ 231 (283)
T 3gen_A 157 GVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN----SETA 231 (283)
T ss_dssp SCEEECSTTGGGGBCCHHHH-STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH----HHHH
T ss_pred CCEEEccccccccccccccc-cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh----hHHH
Confidence 99999999999876543211 1123457888999999998899999999999999999998 9999876422 1121
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
+.+....... .... ....+.+++.+||+.||++|||++++++.|+++
T Consensus 232 ~~~~~~~~~~-~~~~------------~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~ 278 (283)
T 3gen_A 232 EHIAQGLRLY-RPHL------------ASEKVYTIMYSCWHEKADERPTFKILLSNILDV 278 (283)
T ss_dssp HHHHTTCCCC-CCTT------------CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcccCCC-CCCc------------CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 1121111100 1111 113477899999999999999999999999886
No 53
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.6e-41 Score=337.74 Aligned_cols=255 Identities=25% Similarity=0.345 Sum_probs=203.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|++ +++.||||++....... ...+.+.+|+.++++++||||++++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~---~~~~~avK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~~ 73 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW---QGNDIVVKVLKVRDWST------------RKSRDFNEECPRLRIFSHPNVLPVL 73 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE---TTEEEEEEEECCTTCCH------------HHHHHHHHHGGGGCCCSCTTEECEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE---CCeeEEEEEecccccCH------------HHHHHHHHHHHHHHhcCCCchhheE
Confidence 46899999999999999999987 58899999987643221 1145789999999999999999999
Q ss_pred eeeecC--CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeCCCCCCCeEecC
Q 006739 416 AHMARP--DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPR--IIHRDLKPANVLLDD 491 (633)
Q Consensus 416 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~--ivH~Dikp~Nill~~ 491 (633)
+++.+. ...++||||+++|+|.+++... ....+++..++.++.|+++||+|| |+.+ |+||||||+||+++.
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~~i~H~dikp~Nil~~~ 148 (271)
T 3kmu_A 74 GACQSPPAPHPTLITHWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFL---HTLEPLIPRHALNSRSVMIDE 148 (271)
T ss_dssp EEECTTTSSSCEEEEECCTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHH---TTSSSCCTTCCCSGGGEEECT
T ss_pred EEEccCCCCCeEeeecccCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHH---hcCCCceecCCCccceEEEcC
Confidence 999887 7789999999999999999752 234689999999999999999999 7777 999999999999999
Q ss_pred CCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCC---ccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 492 DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTD---KCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
++.++++|||++..... ....||+.|+|||.+.+..++. ++||||||+++|||++|+.||..... .
T Consensus 149 ~~~~~l~~~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~ 217 (271)
T 3kmu_A 149 DMTARISMADVKFSFQS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN----M 217 (271)
T ss_dssp TSCEEEEGGGSCCTTSC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH----H
T ss_pred CcceeEEeccceeeecc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh----H
Confidence 99999999988754322 2346899999999998765554 79999999999999999999975322 1
Q ss_pred hHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhhC
Q 006739 569 SLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIRH 633 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~~ 633 (633)
.. ............ . +......+.+++..||+.||++|||++|+++.|+++++
T Consensus 218 ~~---~~~~~~~~~~~~-----~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 218 EI---GMKVALEGLRPT-----I----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HH---HHHHHHSCCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HH---HHHHHhcCCCCC-----C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11 111111111110 0 01112237888999999999999999999999999864
No 54
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.7e-42 Score=352.84 Aligned_cols=266 Identities=23% Similarity=0.373 Sum_probs=193.7
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCC--eEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNG--KMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNL 411 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 411 (633)
...++|++.+.||+|+||.||+|++...++ ..||||++....... ...+++.+|++++++++||||
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~i 87 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS------------SDIEEFLREAACMKEFDHPHV 87 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C------------HHHHHHHHHHHHHTTCCCTTB
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH------------HHHHHHHHHHHHHHHCCCCce
Confidence 345789999999999999999998753322 379999985432111 125678899999999999999
Q ss_pred cccceeeecCCcc------EEEEecccCCCHHHHHhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCC
Q 006739 412 LPLLAHMARPDCH------LLVYEFMKNGSLQDILNDVSQG--RRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLK 483 (633)
Q Consensus 412 v~l~~~~~~~~~~------~lv~e~~~~gsL~~~l~~~~~~--~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dik 483 (633)
+++++++...... ++||||+++|+|.+++...... ...+++..++.++.|+++||+|| |+.+|+|||||
T Consensus 88 v~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L---H~~~ivH~Dik 164 (323)
T 3qup_A 88 AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLA 164 (323)
T ss_dssp CCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCS
T ss_pred ehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHH---HcCCcccCCCC
Confidence 9999999877655 8999999999999999764432 23689999999999999999999 67899999999
Q ss_pred CCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccc
Q 006739 484 PANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFF 562 (633)
Q Consensus 484 p~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~ 562 (633)
|+||++++++.+||+|||+++...............+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 165 p~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 244 (323)
T 3qup_A 165 ARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE 244 (323)
T ss_dssp GGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC
Confidence 9999999999999999999987755443333334567889999999999999999999999999999999 999987643
Q ss_pred cccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 563 QHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
. ....+.+. ....... .......+.+++.+||+.||++|||+.++++.|+++
T Consensus 245 ~----~~~~~~~~---~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 296 (323)
T 3qup_A 245 N----AEIYNYLI---GGNRLKQ----------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296 (323)
T ss_dssp G----GGHHHHHH---TTCCCCC----------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred h----HHHHHHHh---cCCCCCC----------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 2 22222221 1111110 111123478899999999999999999999999886
No 55
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-42 Score=352.87 Aligned_cols=267 Identities=24% Similarity=0.309 Sum_probs=211.7
Q ss_pred hhhhcCcccccccccccCeeEEEEEec----CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-C
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELP----GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-R 407 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~ 407 (633)
....++|++.+.||+|+||.||+|++. ..++..||+|++...... ...+.+.+|+.++.++ +
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~~ 107 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS-------------SEREALMSELKMMTQLGS 107 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------------CHHHHHHHHHHHHHCC
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCH-------------HHHHHHHHHHHHHHhhcC
Confidence 445678999999999999999999862 346778999998643211 1145788999999999 8
Q ss_pred CCcccccceeeecCCccEEEEecccCCCHHHHHhhhcCC-------------------CCCCCHHHHHHHHHHHHHHHHH
Q 006739 408 HRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQG-------------------RRELDWLARHKIALGVACGLEY 468 (633)
Q Consensus 408 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~~L~~ 468 (633)
||||+++++++...+..++||||+++|+|.+++...... ...+++..++.++.|+++||+|
T Consensus 108 hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 187 (344)
T 1rjb_A 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF 187 (344)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHH
T ss_pred CCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999763321 1348999999999999999999
Q ss_pred HHhcCCCCeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHH
Q 006739 469 LHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLL 548 (633)
Q Consensus 469 Lh~~h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l 548 (633)
| |+.+|+||||||+||+++.++.+||+|||++................||+.|+|||.+.+..++.++||||||+++
T Consensus 188 L---H~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 264 (344)
T 1rjb_A 188 L---EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL 264 (344)
T ss_dssp H---HHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred H---HhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHH
Confidence 9 6789999999999999999999999999999877654444344456688999999999998999999999999999
Q ss_pred HHHHh-CCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHH
Q 006739 549 AVLVM-GRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCM 627 (633)
Q Consensus 549 ~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~ 627 (633)
|||+| |+.||..... .....+.+........ +......+.+++.+||+.||++|||+.|+++.
T Consensus 265 ~el~t~g~~p~~~~~~---~~~~~~~~~~~~~~~~-------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 328 (344)
T 1rjb_A 265 WEIFSLGVNPYPGIPV---DANFYKLIQNGFKMDQ-------------PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 328 (344)
T ss_dssp HHHTTTSCCSSTTCCC---SHHHHHHHHTTCCCCC-------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCCCcccCCc---HHHHHHHHhcCCCCCC-------------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 99998 9999976432 1222222222111110 01112347889999999999999999999999
Q ss_pred HHhh
Q 006739 628 LSQI 631 (633)
Q Consensus 628 l~~~ 631 (633)
|+.+
T Consensus 329 l~~~ 332 (344)
T 1rjb_A 329 LGCQ 332 (344)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
No 56
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=359.40 Aligned_cols=255 Identities=20% Similarity=0.288 Sum_probs=203.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|... .+|+.||+|++....... ...+.+.+|++++++++||||++++
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~-~~~~~~a~K~i~~~~~~~------------~~~~~~~~E~~il~~l~hpnIv~l~ 76 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKV-LAGQEYAAMIINTKKLSA------------RDHQKLEREARICRLLKHPNIVRLH 76 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEET-TTTEEEEEEEEESCSCHH------------HHHHHHHHHHHHHHHCCBTTBCCEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEEC-CCCcEEEEEEEEcccCCH------------HHHHHHHHHHHHHHhCCCcCCCeEE
Confidence 567999999999999999999764 589999999987654321 1245788999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec---CC
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD---DD 492 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~---~~ 492 (633)
+++.+.+..++||||+++|+|.+.+.. ...+++..+..++.||++||+|| |+.+|+||||||+|||++ ++
T Consensus 77 ~~~~~~~~~~lv~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~l---H~~givHrDlKp~NIll~~~~~~ 149 (444)
T 3soa_A 77 DSISEEGHHYLIFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHC---HQMGVVHRNLKPENLLLASKLKG 149 (444)
T ss_dssp EEEECSSEEEEEECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSSTTEEESBSSTT
T ss_pred EEEEECCEEEEEEEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEeccCCC
Confidence 999999999999999999999999875 35699999999999999999999 678999999999999998 46
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+.+||+|||+++........ .....||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.. ...+.+
T Consensus 150 ~~vkL~DFG~a~~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~----~~~~~~ 223 (444)
T 3soa_A 150 AAVKLADFGLAIEVEGEQQA--WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED----QHRLYQ 223 (444)
T ss_dssp CCEEECCCSSCBCCCTTCCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHH
T ss_pred CcEEEccCceeEEecCCCce--eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc----HHHHHH
Confidence 78999999999877654322 234679999999999999999999999999999999999999986532 222222
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+..... ..... ........+.+++..||+.||++|||+.|+++
T Consensus 224 ~i~~~~~--~~~~~--------~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 224 QIKAGAY--DFPSP--------EWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHHTCC--CCCTT--------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhCCC--CCCcc--------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 2221111 11100 00111234778999999999999999999986
No 57
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6.7e-42 Score=350.86 Aligned_cols=261 Identities=20% Similarity=0.277 Sum_probs=207.9
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 414 (633)
.++|++.+.||+|+||.||+|+.. .+|+.||||++..... .+++.+|+++++++ +||||+++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~----------------~~~~~~E~~~l~~l~~h~~i~~~ 70 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNL-YTNEYVAIKLEPMKSR----------------APQLHLEYRFYKQLGSGDGIPQV 70 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEET-TTTEEEEEEEEETTCS----------------SCCHHHHHHHHHHHCSCTTSCCE
T ss_pred cCCeEEEEEeeccCCceEEEEEEC-CCCcEEEEEEeccccc----------------hHHHHHHHHHHHHhhCCCCCCEE
Confidence 467999999999999999999864 5799999999864432 23477899999999 89999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++...+..++||||+ +++|.+++... ...+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.
T Consensus 71 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~L---H~~~iiHrDlkp~Nill~~~~~ 143 (330)
T 2izr_A 71 YYFGPCGKYNAMVLELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYV---HSKNLIYRDVKPENFLIGRPGN 143 (330)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECCGGG
T ss_pred EEEEecCCccEEEEEeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeeeccCCC
Confidence 99999999999999999 99999999753 35799999999999999999999 6779999999999999998887
Q ss_pred -----eEEcccccccccCCCCCcc-----eecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccc
Q 006739 495 -----ARIADFGLAKAMPDAQTHI-----TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQH 564 (633)
Q Consensus 495 -----~kl~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~ 564 (633)
+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 144 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~ 223 (330)
T 2izr_A 144 KTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD 223 (330)
T ss_dssp TCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS
T ss_pred CCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc
Confidence 9999999998765443211 123567999999999999999999999999999999999999999864322
Q ss_pred cccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 565 TEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
........+... .... .........+ .+.+++..||+.||.+||+++++++.|+++
T Consensus 224 ~~~~~~~~i~~~-~~~~------~~~~~~~~~p----~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 224 TLKERYQKIGDT-KRAT------PIEVLCENFP----EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp SHHHHHHHHHHH-HHHS------CHHHHTTTCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHhh-hccC------CHHHHhccCh----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 211111111111 1100 0111111122 488899999999999999999999999876
No 58
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.2e-42 Score=349.03 Aligned_cols=264 Identities=25% Similarity=0.381 Sum_probs=200.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.....+ ......+.+|++++++++||||++++
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~--~~~~vavK~~~~~~~~------------~~~~~~~~~E~~~l~~l~hp~iv~~~ 85 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS--QGRIVALKRIRLDAED------------EGIPSTAIREISLLKELHHPNIVSLI 85 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET--TSCEEEEEEEC------------------CHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC--CCCEEEEEEEeccccc------------chhhHHHHHHHHHHHHcCCCCEeeee
Confidence 478999999999999999999875 6899999998543221 11145678999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+++..++||||+++ +|.+++.. ....+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+
T Consensus 86 ~~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~Dikp~NIl~~~~~~~ 158 (311)
T 3niz_A 86 DVIHSERCLTLVFEFMEK-DLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHC---HQHRILHRDLKPQNLLINSDGAL 158 (311)
T ss_dssp EEECCSSCEEEEEECCSE-EHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCE
T ss_pred eEEccCCEEEEEEcCCCC-CHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCchHhEEECCCCCE
Confidence 999999999999999975 88888764 235689999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
||+|||+++........ .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ....+
T Consensus 159 kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~i 232 (311)
T 3niz_A 159 KLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD----QLPKI 232 (311)
T ss_dssp EECCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT----HHHHH
T ss_pred EEccCcCceecCCCccc--ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH----HHHHH
Confidence 99999999876543222 234578999999999876 568999999999999999999999997643322 12222
Q ss_pred HHhhccCCcchhhh----------------hhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 575 RNVMTSENPTRAID----------------AKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~~~~~~~d----------------~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.............. ........+.....+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 233 FSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 22222111110000 00000000111234778999999999999999999986
No 59
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.5e-41 Score=344.83 Aligned_cols=249 Identities=23% Similarity=0.347 Sum_probs=201.1
Q ss_pred CcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccccee
Q 006739 338 GLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAH 417 (633)
Q Consensus 338 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 417 (633)
.|+..+.||+|+||.||+|+.. .+|+.||||++....... .+.+.+|+.++++++||||++++++
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~-~~g~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~~~~~ 110 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREK-HSGRQVAVKMMDLRKQQR--------------RELLFNEVVIMRDYQHFNVVEMYKS 110 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTCCS--------------HHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred hhhccEEeccCCCeEEEEEEEC-CCCcEEEEEEEeccchhH--------------HHHHHHHHHHHHhCCCCCcceEEEE
Confidence 3667789999999999999864 578999999986543211 3567889999999999999999999
Q ss_pred eecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceEE
Q 006739 418 MARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARI 497 (633)
Q Consensus 418 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~kl 497 (633)
+...+..++||||+++++|.+++.. ..+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||
T Consensus 111 ~~~~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl 182 (321)
T 2c30_A 111 YLVGEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYL---HAQGVIHRDIKSDSILLTLDGRVKL 182 (321)
T ss_dssp EEETTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEE
T ss_pred EEECCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCcEEE
Confidence 9999999999999999999999863 4589999999999999999999 6789999999999999999999999
Q ss_pred cccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHHHh
Q 006739 498 ADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNV 577 (633)
Q Consensus 498 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 577 (633)
+|||+++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.
T Consensus 183 ~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~----~~~~~~~~-- 254 (321)
T 2c30_A 183 SDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP----VQAMKRLR-- 254 (321)
T ss_dssp CCCTTCEECCSSSCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHHHH--
T ss_pred eeeeeeeecccCccc--cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHh--
Confidence 999999876553322 2345799999999999999999999999999999999999999865321 12222222
Q ss_pred hccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 578 MTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 578 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.......... .. ....+.+++.+||+.||++|||++|+++
T Consensus 255 -~~~~~~~~~~----~~----~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 255 -DSPPPKLKNS----HK----VSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp -HSSCCCCTTG----GG----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -cCCCCCcCcc----cc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111110000 01 1123778889999999999999999986
No 60
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.3e-41 Score=352.44 Aligned_cols=254 Identities=22% Similarity=0.343 Sum_probs=203.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|... .+|+.||+|++....... +..+.+.+|+.++++++||||++++
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~------------~~~~~~~~E~~il~~l~hpnIv~~~ 94 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHK-TTGLEFAAKIINTKKLSA------------RDFQKLEREARICRKLQHPNIVRLH 94 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTCCH------------HHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEEC-CCCCEEEEEEEEcccCCH------------HHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 467999999999999999999864 578999999986543321 1145788999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC--
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM-- 493 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~-- 493 (633)
+++.+.+..++||||+++|+|.+++.. ...+++..+..++.||++||+|| |+.+|+||||||+||+++.++
T Consensus 95 ~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~Dlkp~NIll~~~~~~ 167 (362)
T 2bdw_A 95 DSIQEESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYC---HSNGIVHRNLKPENLLLASKAKG 167 (362)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEESCSSTT
T ss_pred EEEEeCCEEEEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCchHHEEEecCCCC
Confidence 999999999999999999999998864 35689999999999999999999 678999999999999998654
Q ss_pred -ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 494 -EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 494 -~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
.+||+|||+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+..
T Consensus 168 ~~~kl~DfG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~----~~~~~~ 240 (362)
T 2bdw_A 168 AAVKLADFGLAIEVNDSEAW---HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED----QHRLYA 240 (362)
T ss_dssp CCEEECCCTTCBCCTTCCSC---CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHH
T ss_pred CCEEEeecCcceEecCCccc---ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC----HHHHHH
Confidence 5999999999877654322 34579999999999999999999999999999999999999986532 122222
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+.... ....... .......+.+++.+||+.||++|||+.|+++
T Consensus 241 ~i~~~~--~~~~~~~--------~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 241 QIKAGA--YDYPSPE--------WDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp HHHHTC--CCCCTTG--------GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHhCC--CCCCccc--------ccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 222111 1111000 0111233778999999999999999999875
No 61
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.3e-41 Score=340.59 Aligned_cols=262 Identities=19% Similarity=0.242 Sum_probs=208.3
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 414 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++..... ...+.+|+.++.++ +|+|++++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~----------------~~~~~~e~~~~~~l~~~~~i~~~ 71 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNL-LNNQQVAIKFEPRRSD----------------APQLRDEYRTYKLLAGCTGIPNV 71 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEET-TTTEEEEEEEEECCTT----------------SCCHHHHHHHHHHTTTCTTCCCE
T ss_pred ccceEEEEEEeecCCEEEEEEEEC-CCCcEEEEEEeccCCc----------------cHHHHHHHHHHHHHhcCCCCCeE
Confidence 467999999999999999999864 5799999998854331 23467788999998 79999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++......++||||+ +++|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.
T Consensus 72 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~~~~~ 144 (298)
T 1csn_A 72 YYFGQEGLHNVLVIDLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSI---HEKSLVYRDIKPDNFLIGRPNS 144 (298)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECCSSS
T ss_pred EeecCCCceeEEEEEec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEeccCCC
Confidence 99999999999999999 99999999753 34699999999999999999999 6889999999999999987776
Q ss_pred -----eEEcccccccccCCCCCc-----ceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccc
Q 006739 495 -----ARIADFGLAKAMPDAQTH-----ITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQH 564 (633)
Q Consensus 495 -----~kl~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~ 564 (633)
+||+|||+++........ .......||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 145 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 224 (298)
T 1csn_A 145 KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 224 (298)
T ss_dssp TTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC
T ss_pred CCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc
Confidence 999999999877654321 1124467999999999999999999999999999999999999999864332
Q ss_pred cccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 565 TEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
............ ...... +..... ....+.+++..||+.||++||+++++++.|+++
T Consensus 225 ~~~~~~~~~~~~-~~~~~~-----~~~~~~----~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 225 TNKQKYERIGEK-KQSTPL-----RELCAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp CHHHHHHHHHHH-HHHSCH-----HHHTTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHhh-ccCccH-----HHHHhh----CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 222222111111 111111 011111 123478899999999999999999999999886
No 62
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-41 Score=347.22 Aligned_cols=252 Identities=22% Similarity=0.292 Sum_probs=204.1
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|... .+++.||+|.+..... ....+.+|+.+++.++||||++++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~---------------~~~~~~~E~~~l~~l~hpnIv~~~ 67 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVET-SSKKTYMAKFVKVKGT---------------DQVLVKKEISILNIARHRNILHLH 67 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCCTH---------------HHHHHHHHHHHHHHSCCTTBCCEE
T ss_pred hhceEeeeEEecCCCeEEEEEEEC-CCCcEEEEEEEecCcc---------------cHHHHHHHHHHHHhCCCCCCCeEe
Confidence 468999999999999999999864 5789999999864321 134678999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC--CC
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD--DM 493 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~--~~ 493 (633)
+++.+.+..++||||+++|+|.+++.. ....+++..+..++.|+++||+|| |+.+|+||||||+||+++. ++
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~l---H~~givH~Dlkp~NIl~~~~~~~ 141 (321)
T 1tki_A 68 ESFESMEELVMIFEFISGLDIFERINT---SAFELNEREIVSYVHQVCEALQFL---HSHNIGHFDIRPENIIYQTRRSS 141 (321)
T ss_dssp EEEEETTEEEEEECCCCCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSCC
T ss_pred EEEecCCEEEEEEEeCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HHCCCCcCCCCHHHEEEccCCCC
Confidence 999999999999999999999999864 234699999999999999999999 6789999999999999997 78
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKW 573 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~ 573 (633)
.+||+|||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...
T Consensus 142 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~--- 211 (321)
T 1tki_A 142 TIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN----QQI--- 211 (321)
T ss_dssp CEEECCCTTCEECCTTCE---EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH----HHH---
T ss_pred CEEEEECCCCeECCCCCc---cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH----HHH---
Confidence 999999999988765432 2345789999999999988889999999999999999999999975321 122
Q ss_pred HHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 574 MRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 574 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
+.......... +....... ...+.+++.+||+.||++|||+.|+++
T Consensus 212 ~~~i~~~~~~~---~~~~~~~~----s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 212 IENIMNAEYTF---DEEAFKEI----SIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHHHHTCCCC---CHHHHTTS----CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHcCCCCC---ChhhhccC----CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22222211111 11111111 234788999999999999999999986
No 63
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=7.1e-42 Score=354.40 Aligned_cols=256 Identities=22% Similarity=0.324 Sum_probs=194.0
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|++.+.||+|+||.||+++.. .+++.||+|++...... .+.+.+|+.+++.++||||+
T Consensus 16 ~~~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~---------------~~~~~~E~~~l~~l~hpniv 79 (361)
T 3uc3_A 16 MHDSDRYDFVKDIGSGNFGVARLMRDK-LTKELVAVKYIERGAAI---------------DENVQREIINHRSLRHPNIV 79 (361)
T ss_dssp CCCTTTEEEEEEESSSTTSSEEEEEET-TTCCEEEEEEEESSTTS---------------CHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCCcEEEEEEeccCCCEEEEEEEEC-CCCcEEEEEEEecCccc---------------cHHHHHHHHHHHhCCCCCCC
Confidence 344578999999999999999999865 57899999998654321 23577899999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++.+.+..++||||+++|+|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.+
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~L---H~~~ivH~Dlkp~Nill~~~ 152 (361)
T 3uc3_A 80 RFKEVILTPTHLAIIMEYASGGELYERICN----AGRFSEDEARFFFQQLLSGVSYC---HSMQICHRDLKLENTLLDGS 152 (361)
T ss_dssp CEEEEEECSSEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHH---HHTTCCSCCCCGGGEEECSS
T ss_pred cEEEEEeeCCEEEEEEEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCC
Confidence 999999999999999999999999999975 24599999999999999999999 67899999999999999877
Q ss_pred Cc--eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCc-cchHHHHHHHHHHHhCCCCCcccccccccch
Q 006739 493 ME--ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDK-CDIYSFGVLLAVLVMGRLPSDDFFQHTEEMS 569 (633)
Q Consensus 493 ~~--~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~ 569 (633)
+. +||+|||+++....... .....||+.|+|||++.+..++.+ +||||+||++|||++|+.||........
T Consensus 153 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--- 226 (361)
T 3uc3_A 153 PAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD--- 226 (361)
T ss_dssp SSCCEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC---
T ss_pred CCceEEEeecCccccccccCC---CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH---
Confidence 65 99999999875433221 234579999999999988887666 8999999999999999999976433222
Q ss_pred HHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 570 LVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
..+.+........... . ... ....+.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~~~~~~~~~~~~~~---~---~~~---~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 227 YRKTIQRILSVKYSIP---D---DIR---ISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp HHHHHHHHHTTCCCCC---T---TSC---CCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHhcCCCCCC---C---cCC---CCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 2222332222111100 0 000 1123778999999999999999999975
No 64
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.4e-42 Score=372.74 Aligned_cols=259 Identities=24% Similarity=0.379 Sum_probs=211.0
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
...++|+..+.||+|+||.||+|.+. .++..||||.+...... .++|.+|+.++++++||||++
T Consensus 217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~~vavK~~~~~~~~---------------~~~~~~E~~~l~~l~hpniv~ 280 (495)
T 1opk_A 217 MERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTME---------------VEEFLKEAAVMKEIKHPNLVQ 280 (495)
T ss_dssp CCGGGEEEEEESGGGTTSSEEEEEEG-GGTEEEEEEECCSSSSC---------------HHHHHHHHHHHHHCCCTTBCC
T ss_pred cCHHHceeeeEecCCCCeEEEEEEEc-CCCeEEEEEEecCcccc---------------hHHHHHHHHHHHhcCCCCEee
Confidence 34567899999999999999999875 35889999998654321 456889999999999999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
++++|...+..++||||+++|+|.+++.... ...+++..+..++.||++||+|| |+.+|+||||||+|||++.++
T Consensus 281 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~ 355 (495)
T 1opk_A 281 LLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYL---EKKNFIHRNLAARNCLVGENH 355 (495)
T ss_dssp EEEEECSSSSCEEEEECCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECGGG
T ss_pred EEEEEecCCcEEEEEEccCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChhhEEECCCC
Confidence 9999999999999999999999999997532 45689999999999999999999 678999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHHH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~ 572 (633)
.+||+|||+++....... .......+|..|+|||++.+..++.++|||||||++|||++ |+.||..... ..+.+
T Consensus 356 ~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~----~~~~~ 430 (495)
T 1opk_A 356 LVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----SQVYE 430 (495)
T ss_dssp CEEECCTTCEECCTTCCE-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG----GGHHH
T ss_pred cEEEeecccceeccCCce-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH----HHHHH
Confidence 999999999987654322 12233456789999999998899999999999999999999 9999876432 22333
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
.+... .... .+......+.+++.+||+.||++|||+.++++.|+++
T Consensus 431 ~~~~~---~~~~----------~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 431 LLEKD---YRME----------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp HHHTT---CCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHcC---CCCC----------CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 22221 1110 0111123477889999999999999999999999876
No 65
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=6.2e-42 Score=344.29 Aligned_cols=263 Identities=23% Similarity=0.391 Sum_probs=194.7
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|++.+.||+|+||.||+|++ ...||+|++....... ...+.+.+|++++++++||||+++
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~----~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~ 85 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKW----HGDVAVKMLNVTAPTP------------QQLQAFKNEVGVLRKTRHVNILLF 85 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEES----SSEEEEEEESCSSCCH------------HHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred CccceeeeeEecCCCCeEEEEEEE----cCceEEEEEeccCCCH------------HHHHHHHHHHHHHHhCCCCcEEEE
Confidence 356899999999999999999975 3359999986554321 115678899999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++ .....++||||+++++|.+++.. ....+++..++.++.|++.||+|| |+.+|+||||||+||+++.++.
T Consensus 86 ~~~~-~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~l---H~~~i~H~Dlkp~Nil~~~~~~ 158 (289)
T 3og7_A 86 MGYS-TAPQLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYL---HAKSIIHRDLKSNNIFLHEDNT 158 (289)
T ss_dssp EEEE-CSSSCEEEEECCCEEEHHHHHTT---C---CCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEETTTE
T ss_pred Eeec-cCCccEEEEEecCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHH---HhCCcccccCccceEEECCCCC
Confidence 9965 45668999999999999999864 245699999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccc---cCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQ---TLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~ 571 (633)
+||+|||+++...............||+.|+|||.+. +..++.++||||||+++|||++|+.||..... ...+.
T Consensus 159 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~ 235 (289)
T 3og7_A 159 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN---RDQII 235 (289)
T ss_dssp EEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC---HHHHH
T ss_pred EEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch---HHHHH
Confidence 9999999998665433222234457999999999986 56688899999999999999999999976432 12222
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
+.+.......... .........+.+++..||+.||++|||+.++++.|+++.
T Consensus 236 ~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 236 EMVGRGSLSPDLS---------KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp HHHHHTSCCCCTT---------SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HHhcccccCcchh---------hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 2222211111110 001112234788999999999999999999999999885
No 66
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=8.5e-42 Score=352.71 Aligned_cols=261 Identities=20% Similarity=0.274 Sum_probs=204.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|++.+.||+|+||.||+|... .+|+.||||++......... ....+.+.+|+.+++.++||||++++
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~---------~~~~~~~~~E~~~l~~l~hpnIv~~~ 92 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINR-ETGQQFAVKIVDVAKFTSSP---------GLSTEDLKREASICHMLKHPHIVELL 92 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHTSS---------SCCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhhhccccc---------cchHHHHHHHHHHHHhCCCCCCCcEE
Confidence 357899999999999999999864 57899999998432110000 00145688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc-
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME- 494 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~- 494 (633)
+++.+.+..++||||+++|+|.+++.........+++..+..++.||++||+|| |+.+|+||||||+||+++.++.
T Consensus 93 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivHrDlkp~NIl~~~~~~~ 169 (351)
T 3c0i_A 93 ETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC---HDNNIIHRDVKPHCVLLASKENS 169 (351)
T ss_dssp EEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECSSSTT
T ss_pred EEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCChHHeEEecCCCC
Confidence 999999999999999999999988876544456789999999999999999999 6789999999999999987654
Q ss_pred --eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 495 --ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 495 --~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+||+|||+++........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+.
T Consensus 170 ~~vkl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~- 241 (351)
T 3c0i_A 170 APVKLGGFGVAIQLGESGLV--AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-----ERLF- 241 (351)
T ss_dssp CCEEECCCTTCEECCTTSCB--CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-----HHHH-
T ss_pred CcEEEecCcceeEecCCCee--ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-----HHHH-
Confidence 999999999887654321 234579999999999999999999999999999999999999997521 1111
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.......... ++..... ....+.+++.+||+.||++|||+.|+++
T Consensus 242 --~~i~~~~~~~---~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 242 --EGIIKGKYKM---NPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp --HHHHHTCCCC---CHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --HHHHcCCCCC---Ccccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111111110 0111011 1234778999999999999999999975
No 67
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.9e-42 Score=340.15 Aligned_cols=258 Identities=27% Similarity=0.404 Sum_probs=193.1
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|+..+.||+|+||.||+|.+ .++.||||++....... .....+.+.+|+++++.++||||++++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~----------~~~~~~~~~~e~~~l~~l~h~~i~~~~ 72 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW---IGDEVAVKAARHDPDED----------ISQTIENVRQEAKLFAMLKHPNIIALR 72 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE---TTEEEEEEEC--------------------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE---cCCeEEEEEEecCCccc----------HHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence 46899999999999999999986 58899999986543211 112246788999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC----
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD---- 491 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~---- 491 (633)
+++.+.+..++||||+++++|.+++. ...+++..++.++.|+++||+|||.....+|+||||||+||+++.
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~ 147 (271)
T 3dtc_A 73 GVCLKEPNLCLVMEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN 147 (271)
T ss_dssp EEECCC--CEEEEECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS
T ss_pred EEEecCCceEEEEEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc
Confidence 99999999999999999999999985 356899999999999999999995433233999999999999986
Q ss_pred ----CCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCccccccccc
Q 006739 492 ----DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEE 567 (633)
Q Consensus 492 ----~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~ 567 (633)
++.+||+|||+++....... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||.....
T Consensus 148 ~~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---- 219 (271)
T 3dtc_A 148 GDLSNKILKITDFGLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG---- 219 (271)
T ss_dssp SCCSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH----
T ss_pred ccccCcceEEccCCcccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----
Confidence 67899999999986654322 235689999999999998999999999999999999999999975321
Q ss_pred chHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 568 MSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
... ............ ........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 220 ~~~---~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 220 LAV---AYGVAMNKLALP---------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHH---HHHHHTSCCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHH---HHhhhcCCCCCC---------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111 111111111100 0111123478899999999999999999999999875
No 68
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=7.2e-42 Score=365.00 Aligned_cols=253 Identities=29% Similarity=0.413 Sum_probs=205.0
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
...++|+..+.||+|+||.||+|.+ .|+.||||+++.... .+.+.+|++++++++||||++
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~---~~~~vavK~~~~~~~----------------~~~~~~E~~~l~~l~h~niv~ 250 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKNDAT----------------AQAFLAEASVMTQLRHSNLVQ 250 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE---TTEEEEEEEESSCTT----------------SHHHHHHHHHHHTCCCTTBCC
T ss_pred cChHHeEEEeeecCcCCeeEEEEEe---cCCeEEEEEeCCchH----------------HHHHHHHHHHHHhccCCCEEE
Confidence 3457889999999999999999987 578999999865321 356889999999999999999
Q ss_pred cceeeecCC-ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 414 LLAHMARPD-CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 414 l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
+++++...+ ..++||||+++|+|.+++.... ...+++..+..++.||++||+|| |+.+|+||||||+|||++.+
T Consensus 251 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~ 325 (450)
T 1k9a_A 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSED 325 (450)
T ss_dssp EEEEEECTTSCEEEEEECCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTT
T ss_pred EEEEEEcCCCceEEEEEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHhhEEECCC
Confidence 999987665 7899999999999999998632 34579999999999999999999 67899999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~ 571 (633)
+.+||+|||+++...... ....+|..|+|||.+.+..++.++|||||||++|||++ |+.||..... ....
T Consensus 326 ~~~kl~DfG~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~----~~~~ 396 (450)
T 1k9a_A 326 NVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KDVV 396 (450)
T ss_dssp SCEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT----TTHH
T ss_pred CCEEEeeCCCcccccccc-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHHH
Confidence 999999999998654321 12357889999999999999999999999999999998 9999976432 2222
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
+.+. ...... .+......+.+++.+||+.||++|||+.++++.|++++
T Consensus 397 ~~i~---~~~~~~----------~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 397 PRVE---KGYKMD----------APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp HHHH---TTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHH---cCCCCC----------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 2222 111111 01111234778899999999999999999999999875
No 69
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2e-42 Score=369.92 Aligned_cols=258 Identities=26% Similarity=0.408 Sum_probs=207.9
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|+..+.||+|+||.||+|.+. ++..||||++...... .+++.+|++++++++||||+
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~~vavK~~~~~~~~---------------~~~~~~E~~~l~~l~h~~iv 246 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYN--KHTKVAVKTMKPGSMS---------------VEAFLAEANVMKTLQHDKLV 246 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEET--TTEEEEEEEECTTSBC---------------HHHHHHHHHHHTTCCCTTBC
T ss_pred eechHHeEEEEEcccCCceEEEEEEEC--CccEEEEEEecCCCcc---------------HHHHHHHHHHHhhCCCCCEe
Confidence 445678999999999999999999985 6788999998654321 45788999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++. .+..++||||+++|+|.++++... ...+++..+..++.||++||+|| |+.+|+||||||+|||++.+
T Consensus 247 ~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~ 320 (454)
T 1qcf_A 247 KLHAVVT-KEPIYIITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFI---EQRNYIHRDLRAANILVSAS 320 (454)
T ss_dssp CEEEEEC-SSSCEEEECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCSGGGEEECTT
T ss_pred eEEEEEe-CCccEEEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCHHHEEECCC
Confidence 9999986 567899999999999999997532 23588999999999999999999 67899999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~ 571 (633)
+.+||+|||+++........ ......+|..|+|||++....++.++|||||||++|||++ |+.||..... ..+.
T Consensus 321 ~~~kl~DFG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~----~~~~ 395 (454)
T 1qcf_A 321 LVCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN----PEVI 395 (454)
T ss_dssp CCEEECSTTGGGGBCCHHHH-TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHH
T ss_pred CcEEEeeCCCceEcCCCcee-ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH----HHHH
Confidence 99999999999876543211 1123456889999999998899999999999999999999 9999975322 2222
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
+.+.. ...... +......+.+++.+||+.||++|||++++++.|+++
T Consensus 396 ~~i~~---~~~~~~----------~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~ 442 (454)
T 1qcf_A 396 RALER---GYRMPR----------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442 (454)
T ss_dssp HHHHH---TCCCCC----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHc---CCCCCC----------CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 22221 111110 111123478899999999999999999999999986
No 70
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=346.25 Aligned_cols=258 Identities=24% Similarity=0.318 Sum_probs=205.0
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|++.+.||+|+||.||+|+.. .+|+.||+|++............ ..+.+.+|+.++++++||||++++
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~~~--------~~~~~~~E~~~l~~l~hp~iv~~~ 80 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREK-STGLQYAAKFIKKRRTKSSRRGV--------SREDIEREVSILKEIQHPNVITLH 80 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEET-TTCCEEEEEEEEBCCSTTCSSSB--------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccceEeceEEeeCCCeEEEEEEEC-CCCcEEEEEEEEccccccccchh--------hHHHHHHHHHHHHhCCCCCCCcEE
Confidence 467899999999999999999864 57899999998765432111000 045688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC--
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM-- 493 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~-- 493 (633)
+++.+....++||||+++|+|.+++.. ...+++..+..++.|++.||+|| |+.+|+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~NIll~~~~~~ 153 (326)
T 2y0a_A 81 EVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYL---HSLQIAHFDLKPENIMLLDRNVP 153 (326)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESCSSSS
T ss_pred EEEEeCCEEEEEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHH---HHCCeEcCCCCHHHEEEecCCCC
Confidence 999999999999999999999999964 45699999999999999999999 678999999999999999887
Q ss_pred --ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHH
Q 006739 494 --EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 494 --~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~ 571 (633)
.+||+|||+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 154 ~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~ 226 (326)
T 2y0a_A 154 KPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK----QETL 226 (326)
T ss_dssp SCCEEECCCTTCEECCTTSCC---CCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHH
T ss_pred CCCEEEEECCCCeECCCCCcc---ccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH----HHHH
Confidence 7999999999877543321 345799999999999999999999999999999999999999865321 1111
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
..+... ..... ....... ...+.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~~~~--~~~~~----~~~~~~~----~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 227 ANVSAV--NYEFE----DEYFSNT----SALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHT--CCCCC----HHHHTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhc--CCCcC----ccccccC----CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111 11111 1111111 233778899999999999999999986
No 71
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.6e-41 Score=353.82 Aligned_cols=253 Identities=23% Similarity=0.328 Sum_probs=197.9
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 414 (633)
.++|++.++||+|+||.||+|+.. .+++.||+|++.+...... .....+.+|..++.++ +||||+++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~-~~~~~~AvK~~~k~~~~~~-----------~~~~~~~~E~~il~~~~~hp~Iv~l 118 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLK-KTDRIYAMRVVKKELVNDD-----------EDIDWVQTEKHVFEQASNHPFLVGL 118 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEGGGTC---------------CCHHHHHHHHHHHHTTCTTBCCE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhhhccCH-----------HHHHHHHHHHHHHHhcCCCCCcCee
Confidence 468999999999999999999875 5789999999865422110 1134577888888876 89999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+.+..++||||+++|+|.+++... ..+++..+..++.||+.||+|| |+.+|+||||||+|||++.++.
T Consensus 119 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~L---H~~givHrDLKp~NILl~~~g~ 191 (396)
T 4dc2_A 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGH 191 (396)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSC
T ss_pred EEEEEECCEEEEEEEcCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH---HHCCEEeccCCHHHEEECCCCC
Confidence 99999999999999999999999999763 4599999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccc-cchHHH-
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTE-EMSLVK- 572 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~-~~~~~~- 572 (633)
+||+|||+++....... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||........ .....+
T Consensus 192 ikL~DFGla~~~~~~~~--~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~ 269 (396)
T 4dc2_A 192 IKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 269 (396)
T ss_dssp EEECCCTTCBCCCCTTC--CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHH
T ss_pred EEEeecceeeecccCCC--ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHH
Confidence 99999999986433222 22456899999999999999999999999999999999999999964322111 011111
Q ss_pred HHHHhhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCH
Q 006739 573 WMRNVMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNS 621 (633)
Q Consensus 573 ~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 621 (633)
......... ..+.. ....+.+++.+||+.||++||++
T Consensus 270 ~~~~i~~~~~~~p~~------------~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 270 LFQVILEKQIRIPRS------------LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHHHHHCCCCCCTT------------SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred HHHHHhccccCCCCc------------CCHHHHHHHHHHhcCCHhHcCCC
Confidence 111111111 11111 12237789999999999999996
No 72
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=7.1e-42 Score=352.50 Aligned_cols=251 Identities=26% Similarity=0.347 Sum_probs=197.9
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 414 (633)
.++|++.+.||+|+||.||+|+.. .+|+.||+|++.+... ........+.+|.+++..+ +||||+++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~AvK~~~~~~~-----------~~~~~~~~~~~E~~il~~~~~hp~Iv~l 89 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVK-ETGDLYAVKVLKKDVI-----------LQDDDVECTMTEKRILSLARNHPFLTQL 89 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHH-----------HHHTTHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEc-CCCCEEEEEEEEHHHh-----------cchhHHHHHHHHHHHHHhccCCCceeeE
Confidence 478999999999999999999875 5789999999853211 1112245678899999988 69999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+.+..|+||||+++|+|.+++... ..+++..+..++.||+.||+|| |+.+|+||||||+|||++.++.
T Consensus 90 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NILl~~~g~ 162 (353)
T 3txo_A 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKS----RRFDEARARFYAAEIISALMFL---HDKGIIYRDLKLDNVLLDHEGH 162 (353)
T ss_dssp EEEEECSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSC
T ss_pred EEEEEeCCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH---HHCCCcccCCCHHHEEECCCCC
Confidence 99999999999999999999999999763 4599999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
+||+|||+++....... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..+ .
T Consensus 163 ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~----~~~---~ 233 (353)
T 3txo_A 163 CKLADFGMCKEGICNGV--TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE----DDL---F 233 (353)
T ss_dssp EEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH---H
T ss_pred EEEccccceeecccCCc--cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH----HHH---H
Confidence 99999999986433222 22446799999999999998999999999999999999999999975321 122 2
Q ss_pred HHhhccCC-cchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCH------HHHHH
Q 006739 575 RNVMTSEN-PTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNS------KDVRC 626 (633)
Q Consensus 575 ~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~------~ev~~ 626 (633)
..+..... .+.. ....+.+++.+||+.||++||++ +|+++
T Consensus 234 ~~i~~~~~~~p~~------------~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 234 EAILNDEVVYPTW------------LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHHHCCCCCCTT------------SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred HHHHcCCCCCCCC------------CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 22222111 1111 11237788999999999999998 66653
No 73
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.1e-41 Score=337.98 Aligned_cols=261 Identities=27% Similarity=0.494 Sum_probs=202.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|++. .+++.||+|++.......... ..+..+.+.+|++++++++||||++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~i~~~~ 89 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLV-KDKSVVAIKSLILGDSEGETE-------MIEKFQEFQREVFIMSNLNHPNIVKLY 89 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEET-TTCCEEEEEECCCCTTTCCHH-------HHCCSHHHHHHHHHHTTCCCTTBCCEE
T ss_pred hccceehhccccCCceeEEEEEEc-CCceEEEEEEeeccccccchh-------HHHHHHHHHHHHHHHHhCCCCCchhhh
Confidence 478999999999999999999875 578999999986554321110 011136789999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeCCCCCCCeEecCCC
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPR--IIHRDLKPANVLLDDDM 493 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~--ivH~Dikp~Nill~~~~ 493 (633)
+++.+.. ++||||+++|+|.+.+.. ....+++..++.++.|+++||+|| |+.+ |+||||||+||+++.++
T Consensus 90 ~~~~~~~--~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~~ivH~dikp~Nil~~~~~ 161 (287)
T 4f0f_A 90 GLMHNPP--RMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYM---QNQNPPIVHRDLRSPNIFLQSLD 161 (287)
T ss_dssp EEETTTT--EEEEECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHH---HTSSSCCBCSCCSGGGEEESCCC
T ss_pred eeecCCC--eEEEEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHH---HhCCCCeecCCCCcceEEEeccC
Confidence 9986654 799999999999988864 245799999999999999999999 5667 99999999999998877
Q ss_pred c-----eEEcccccccccCCCCCcceecccccCcccccccccc--cCCCCCccchHHHHHHHHHHHhCCCCCcccccccc
Q 006739 494 E-----ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQ--TLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTE 566 (633)
Q Consensus 494 ~-----~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~ 566 (633)
. +||+|||+++..... .....||+.|+|||++. ...++.++||||+||++|||++|+.||......
T Consensus 162 ~~~~~~~kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-- 234 (287)
T 4f0f_A 162 ENAPVCAKVADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-- 234 (287)
T ss_dssp TTCSCCEEECCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC--
T ss_pred CCCceeEEeCCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc--
Confidence 6 999999999754332 23467999999999984 455788999999999999999999999754321
Q ss_pred cchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 567 EMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
.......+. ....... . .......+.+++..||+.||++|||++|+++.|+++
T Consensus 235 ~~~~~~~~~---~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 235 KIKFINMIR---EEGLRPT-----I----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHHHHHH---HSCCCCC-----C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHHHHHHHh---ccCCCCC-----C----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 111111111 1111110 0 111123478899999999999999999999999875
No 74
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=6.9e-42 Score=343.77 Aligned_cols=263 Identities=26% Similarity=0.390 Sum_probs=197.6
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccce
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA 416 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 416 (633)
++|++.+.||+|+||.||+|+.. +|+.||+|++.....+... .+.+.+|++++++++||||+++++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~aiK~~~~~~~~~~~------------~~~~~~E~~~l~~l~h~~iv~~~~ 67 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNN--YGETFALKKIRLEKEDEGI------------PSTTIREISILKELKHSNIVKLYD 67 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET--TSCEEEEEEECCSSGGGCC------------CHHHHHHHHGGGGCCCTTBCCEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcC--CCCEEEEEEEecccccccc------------chhHHHHHHHHHhcCCCCEeeeee
Confidence 57899999999999999999873 7899999998654422110 346778999999999999999999
Q ss_pred eeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceE
Q 006739 417 HMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEAR 496 (633)
Q Consensus 417 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~k 496 (633)
++.+.+..++||||+++ +|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+|
T Consensus 68 ~~~~~~~~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~k 140 (288)
T 1ob3_A 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYC---HDRRVLHRDLKPQNLLINREGELK 140 (288)
T ss_dssp EEECSSCEEEEEECCSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEE
T ss_pred EEccCCeEEEEEEecCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEE
Confidence 99999999999999975 999988752 35689999999999999999999 678999999999999999999999
Q ss_pred EcccccccccCCCCCcceecccccCcccccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 497 IADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTL-KFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 497 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
|+|||+++........ .....||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ...+....+
T Consensus 141 l~Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~~~~ 215 (288)
T 1ob3_A 141 IADFGLARAFGIPVRK--YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE---ADQLMRIFR 215 (288)
T ss_dssp ECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHH
T ss_pred EeECccccccCccccc--cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHH
Confidence 9999999876543221 1335689999999998764 589999999999999999999999975422 111222221
Q ss_pred HhhccCCcch--------hhhhhhh-------hcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 576 NVMTSENPTR--------AIDAKLL-------ENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 576 ~~~~~~~~~~--------~~d~~~~-------~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
......... ..++... ..........+.+++.+||+.||++|||++|+++
T Consensus 216 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 216 -ILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp -HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -HHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111110000 0000000 0001112234778999999999999999999975
No 75
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-41 Score=342.88 Aligned_cols=248 Identities=26% Similarity=0.386 Sum_probs=202.0
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+|+.||+|++.+... ......+.+.+|..+++.++||||++++
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~-----------~~~~~~~~~~~E~~~l~~l~hp~Iv~~~ 72 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIV-----------VRLKQVEHTNDERLMLSIVTHPFIIRMW 72 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHH-----------HHTTCHHHHHHHHHHHHSCCBTTBCCEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHh-----------hhhhHHHHHHHHHHHHhhCCCCCCceEe
Confidence 367999999999999999999864 5789999999853211 0011245678899999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|| |+.+|+||||||+||+++.++.+
T Consensus 73 ~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~ 145 (318)
T 1fot_A 73 GTFQDAQQIFMIMDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYL---HSKDIIYRDLKPENILLDKNGHI 145 (318)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECTTSCE
T ss_pred EEEEeCCEEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChheEEEcCCCCE
Confidence 999999999999999999999999976 34689999999999999999999 68899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .. ...
T Consensus 146 kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~---~~~ 213 (318)
T 1fot_A 146 KITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT----MK---TYE 213 (318)
T ss_dssp EECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH----HH---HHH
T ss_pred EEeecCcceecCCc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH----HH---HHH
Confidence 99999999876542 1345799999999999999999999999999999999999999965321 11 122
Q ss_pred HhhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCC-----CHHHHHH
Q 006739 576 NVMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERP-----NSKDVRC 626 (633)
Q Consensus 576 ~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~ev~~ 626 (633)
.+.... .....+ ...+.+++.+|++.||++|| +++|+++
T Consensus 214 ~i~~~~~~~p~~~------------~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 214 KILNAELRFPPFF------------NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHHCCCCCCTTS------------CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHhCCCCCCCCC------------CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 222211 111111 12377889999999999999 8888864
No 76
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.3e-42 Score=342.76 Aligned_cols=260 Identities=23% Similarity=0.338 Sum_probs=195.5
Q ss_pred hhhcCcccccccccccCeeEEEEEecC--CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPG--SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNL 411 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 411 (633)
...++|++.+.||+|+||.||+|.+.. ..+..||+|.+...... ...+.+.+|+.++++++||||
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i 78 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-------------SVREKFLQEALTMRQFDHPHI 78 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSH-------------HHHHHHHHHHHHHHTCCCTTB
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCH-------------HHHHHHHHHHHHHHhCCCCcc
Confidence 345789999999999999999998753 23567999998643211 124578899999999999999
Q ss_pred cccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC
Q 006739 412 LPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD 491 (633)
Q Consensus 412 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~ 491 (633)
+++++++. .+..++||||+++++|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.
T Consensus 79 v~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~ 151 (281)
T 1mp8_A 79 VKLIGVIT-ENPVWIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSS 151 (281)
T ss_dssp CCEEEEEC-SSSCEEEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEE
T ss_pred ceEEEEEc-cCccEEEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH---HhCCeecccccHHHEEECC
Confidence 99999984 46789999999999999999752 34689999999999999999999 6789999999999999999
Q ss_pred CCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchH
Q 006739 492 DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSL 570 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~ 570 (633)
++.+||+|||+++......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ...
T Consensus 152 ~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~----~~~ 226 (281)
T 1mp8_A 152 NDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----NDV 226 (281)
T ss_dssp TTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG----GGH
T ss_pred CCCEEECccccccccCcccccc-cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH----HHH
Confidence 9999999999998775543221 233457889999999998899999999999999999997 9999876432 222
Q ss_pred HHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 571 VKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 571 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
...+.. ..... . .......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 227 ~~~i~~---~~~~~--~--------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 227 IGRIEN---GERLP--M--------PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp HHHHHT---TCCCC--C--------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHc---CCCCC--C--------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 222221 11110 0 011123477899999999999999999999999887
No 77
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=352.61 Aligned_cols=253 Identities=24% Similarity=0.339 Sum_probs=201.3
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++..... ......+.+.+|+++++.++|||||+++
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~-~~~~~~AiK~~~~~~~-----------~~~~~~~~~~~E~~il~~l~hp~Iv~l~ 81 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKN-DTKKMYAMKYMNKQKC-----------VERNEVRNVFKELQIMQGLEHPFLVNLW 81 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEET-TTCCEEEEEEEEHHHH-----------HHTTCHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEehhhc-----------ccHHHHHHHHHHHHHHHhCCCCCCCcEE
Confidence 368999999999999999999865 5789999999843211 0111246788999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|| |+.+|+||||||+|||++.++.+
T Consensus 82 ~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~v 154 (384)
T 4fr4_A 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYL---QNQRIIHRDMKPDNILLDEHGHV 154 (384)
T ss_dssp EEEECSSEEEEEECCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCE
T ss_pred EEEEeCCEEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCcHHHeEECCCCCE
Confidence 999999999999999999999999975 45699999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCccccccccccc---CCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT---LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....
T Consensus 155 kL~DFG~a~~~~~~~~---~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-~~~~~-- 228 (384)
T 4fr4_A 155 HITDFNIAAMLPRETQ---ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST-SSKEI-- 228 (384)
T ss_dssp EECCCTTCEECCTTCC---BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS-CHHHH--
T ss_pred EEeccceeeeccCCCc---eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc-cHHHH--
Confidence 9999999987754432 234679999999999864 45899999999999999999999999753221 11122
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCC-HHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPN-SKDVR 625 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs-~~ev~ 625 (633)
........... +......+.+++.+||+.||++||+ ++++.
T Consensus 229 -~~~~~~~~~~~-----------p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 229 -VHTFETTVVTY-----------PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp -HHHHHHCCCCC-----------CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred -HHHHhhcccCC-----------CCcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 22111111100 0111234788999999999999999 66654
No 78
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.4e-41 Score=342.52 Aligned_cols=266 Identities=24% Similarity=0.350 Sum_probs=200.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|... .+|+.||+|++........ ....++.+|+.++++++||||++++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~~i~~~~ 98 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACL-LDGVPVALKKVQIFDLMDA-----------KARADCIKEIDLLKQLNHPNVIKYY 98 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEET-TTCCEEEEEEECTTSSCCH-----------HHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred ccceEEEEeecCCCCceEEEEEEc-CCCceEEEEeeehhhccCH-----------HHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 467999999999999999999864 5789999999865322110 1256788999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++...+..++||||+++++|.+++.........+++..++.++.|+++||+|| |+.+|+||||||+||+++.++.+
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dl~p~NIl~~~~~~~ 175 (310)
T 2wqm_A 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM---HSRRVMHRDIKPANVFITATGVV 175 (310)
T ss_dssp EEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCE
T ss_pred EEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCcHHHEEEcCCCCE
Confidence 999999999999999999999999986555567799999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
||+|||+++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... .......
T Consensus 176 kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~ 248 (310)
T 2wqm_A 176 KLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCK 248 (310)
T ss_dssp EECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-----CHHHHHH
T ss_pred EEEeccceeeecCCCcc--ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-----hHHHHHH
Confidence 99999999876543221 1235689999999999999999999999999999999999999865321 1112222
Q ss_pred HhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 576 NVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 576 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
......... .. .... ...+.+++.+||+.||++|||++++++.|++++
T Consensus 249 ~~~~~~~~~-~~-----~~~~---~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 249 KIEQCDYPP-LP-----SDHY---SEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp HHHTTCSCC-CC-----TTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhhcccCCC-Cc-----cccc---CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 222111111 00 0111 223778899999999999999999999999874
No 79
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.2e-41 Score=345.31 Aligned_cols=253 Identities=24% Similarity=0.320 Sum_probs=198.8
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 414 (633)
.++|+..+.||+|+||.||+|+.. .+++.||+|++.+..... ....+.+.+|..++.++ +||||+++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~aiK~~~~~~~~~-----------~~~~~~~~~E~~~l~~~~~hp~iv~l 75 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLK-KTDRIYAMKVVKKELVND-----------DEDIDWVQTEKHVFEQASNHPFLVGL 75 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEGGGSCS-----------HHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred hhheEEEEEEEecCCeEEEEEEEC-CCCCEEEEEEEEhHHhcc-----------hHHHHHHHHHHHHHHhcCCCCccCeE
Confidence 467999999999999999999875 578999999986542211 01245678899999887 89999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+.+..|+||||+++|+|.+++... ..+++..++.++.||+.||+|| |+.+|+||||||+||+++.++.
T Consensus 76 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~ 148 (345)
T 3a8x_A 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGH 148 (345)
T ss_dssp EEEEECSSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSC
T ss_pred EEEEEeCCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEECCCCC
Confidence 99999999999999999999999999753 4589999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCccccccccc--chHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEE--MSLVK 572 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~--~~~~~ 572 (633)
+||+|||+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......... .....
T Consensus 149 ~kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 226 (345)
T 3a8x_A 149 IKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 226 (345)
T ss_dssp EEECCGGGCBCSCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHH
T ss_pred EEEEeccccccccCCCC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHH
Confidence 99999999986433222 224467999999999999999999999999999999999999999753221110 11111
Q ss_pred HHHHhhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCH
Q 006739 573 WMRNVMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNS 621 (633)
Q Consensus 573 ~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 621 (633)
......... ..+. .....+.+++.+||+.||++||++
T Consensus 227 ~~~~i~~~~~~~p~------------~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 227 LFQVILEKQIRIPR------------SLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHHHHHHCCCCCCT------------TSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred HHHHHHcCCCCCCC------------CCCHHHHHHHHHHhcCCHhHCCCC
Confidence 111111111 1111 112237788999999999999996
No 80
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1e-41 Score=350.13 Aligned_cols=265 Identities=25% Similarity=0.374 Sum_probs=210.2
Q ss_pred hhhcCcccccccccccCeeEEEEEecC------CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPG------SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI- 406 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l- 406 (633)
...++|++.+.||+|+||.||+|++.+ .++..||+|++...... ...+.+.+|+++++++
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~ 98 (334)
T 2pvf_A 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-------------KDLSDLVSEMEMMKMIG 98 (334)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCH-------------HHHHHHHHHHHHHHHHC
T ss_pred CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcH-------------HHHHHHHHHHHHHHHhh
Confidence 345789999999999999999998742 35778999998654321 1156788999999999
Q ss_pred CCCcccccceeeecCCccEEEEecccCCCHHHHHhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 006739 407 RHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQG------------RRELDWLARHKIALGVACGLEYLHISHN 474 (633)
Q Consensus 407 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~ 474 (633)
+||||+++++++.+.+..++||||+++|+|.+++...... ...+++..++.++.|+++||+|| |+
T Consensus 99 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~ 175 (334)
T 2pvf_A 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---AS 175 (334)
T ss_dssp CCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHH---HH
T ss_pred cCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---Hh
Confidence 8999999999999999999999999999999999864321 23589999999999999999999 67
Q ss_pred CCeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-
Q 006739 475 PRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM- 553 (633)
Q Consensus 475 ~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt- 553 (633)
.+|+||||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++
T Consensus 176 ~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~ 255 (334)
T 2pvf_A 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255 (334)
T ss_dssp TTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred CCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999987765543333344567889999999988889999999999999999999
Q ss_pred CCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 554 GRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 554 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
|+.||.... ...+.+.+... .... ........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 256 g~~p~~~~~----~~~~~~~~~~~---~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 256 GGSPYPGIP----VEELFKLLKEG---HRMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp SCCSSTTCC----HHHHHHHHHHT---CCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCcCcCC----HHHHHHHHhcC---CCCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 999986532 12222222221 1111 0011123477899999999999999999999999886
No 81
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.1e-41 Score=340.92 Aligned_cols=265 Identities=23% Similarity=0.300 Sum_probs=200.5
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccce
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA 416 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 416 (633)
++|++.+.||+|+||.||+|+.. .+++.||+|++........ ....+.+|+.++++++||||+++++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~------------~~~~~~~E~~~l~~l~h~~iv~~~~ 68 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNR-ETHEIVALKRVRLDDDDEG------------VPSSALREICLLKELKHKNIVRLHD 68 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEESSCSSTT------------HHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred CCceeeeEecCCCCeEEEEEEEC-CCCceEEEEeeeccCCcCC------------cchHHHHHHHHHhcCCCCCEeeEEe
Confidence 57899999999999999999875 5789999999875543211 1456788999999999999999999
Q ss_pred eeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceE
Q 006739 417 HMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEAR 496 (633)
Q Consensus 417 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~k 496 (633)
++.+.+..++||||+++ ++.+.+.. ....+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+|
T Consensus 69 ~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~l---H~~~ivH~dikp~Nil~~~~~~~k 141 (292)
T 3o0g_A 69 VLHSDKKLTLVFEFCDQ-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFC---HSRNVLHRDLKPQNLLINRNGELK 141 (292)
T ss_dssp EEEETTEEEEEEECCSE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEE
T ss_pred EEEeCCEEEEEEecCCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEE
Confidence 99999999999999976 66555543 235699999999999999999999 677999999999999999999999
Q ss_pred EcccccccccCCCCCcceecccccCcccccccccccCC-CCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 497 IADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLK-FTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 497 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
|+|||+++........ .....||+.|+|||++.+.. ++.++||||+||++|||++|+.||... .......+.+.
T Consensus 142 l~Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~---~~~~~~~~~i~ 216 (292)
T 3o0g_A 142 LANFGLARAFGIPVRC--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG---NDVDDQLKRIF 216 (292)
T ss_dssp ECCCTTCEECCSCCSC--CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC---SSHHHHHHHHH
T ss_pred EeecccceecCCcccc--ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCC---CCHHHHHHHHH
Confidence 9999999876543222 23457899999999987765 799999999999999999999886432 12222222222
Q ss_pred HhhccCCcchh--hh-------------hhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 576 NVMTSENPTRA--ID-------------AKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 576 ~~~~~~~~~~~--~d-------------~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
........... .. ........+.....+.+++.+||+.||++|||++|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp HHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 22111110000 00 00000011122334778999999999999999999975
No 82
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=348.75 Aligned_cols=260 Identities=22% Similarity=0.336 Sum_probs=198.1
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeE----EEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKM----IAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRN 410 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n 410 (633)
..++|++.+.||+|+||.||+|++.. +++. ||+|.+....... ..+++.+|+.++++++|||
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~kv~iK~~~~~~~~~-------------~~~~~~~E~~~l~~l~hp~ 78 (327)
T 3lzb_A 13 KETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPK-------------ANKEILDEAYVMASVDNPH 78 (327)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEECC-TTCSCCEEEEEEEECCCSSCC-------------CHHHHHHHHHHHTTCCBTT
T ss_pred CHhHceEEEEeeeCCCeEEEEEEEcC-CCceEEEEEEEEeeccccCHH-------------HHHHHHHHHHHHHhCCCCC
Confidence 35789999999999999999998753 4443 5777765332111 1457889999999999999
Q ss_pred ccccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 411 LLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 411 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
|+++++++.... .++|+||+++|+|.+++... ...+++..++.++.|+++||+|| |+.+|+||||||+||+++
T Consensus 79 iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~ 151 (327)
T 3lzb_A 79 VCRLLGICLTST-VQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVK 151 (327)
T ss_dssp BCCCCEEEESSS-EEEEECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEE
T ss_pred eeEEEEEEecCC-ceEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH---hhCCCcCCCCCHHHEEEc
Confidence 999999998755 78999999999999999753 35699999999999999999999 678999999999999999
Q ss_pred CCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccch
Q 006739 491 DDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMS 569 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~ 569 (633)
.++.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||++ |+.||..... ..
T Consensus 152 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~----~~ 227 (327)
T 3lzb_A 152 TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA----SE 227 (327)
T ss_dssp ETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG----GG
T ss_pred CCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH----HH
Confidence 999999999999988765443333334567889999999999999999999999999999999 9999976432 22
Q ss_pred HHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 570 LVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
+.+.+....... .. ......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 228 ~~~~~~~~~~~~-~~------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 228 ISSILEKGERLP-QP------------PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp HHHHHHTTCCCC-CC------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCC-CC------------ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 323222211111 01 111223778999999999999999999999998874
No 83
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.8e-42 Score=340.92 Aligned_cols=257 Identities=25% Similarity=0.372 Sum_probs=208.4
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|+..+.||+|+||.||++.+. +++.||+|++...... .+++.+|++++++++||||+++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vaiK~~~~~~~~---------------~~~~~~e~~~l~~l~h~~i~~~ 68 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREGAMS---------------EEDFIEEAEVMMKLSHPKLVQL 68 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET--TTEEEEEEEECTTTBC---------------HHHHHHHHHHHHTCCCTTBCCE
T ss_pred chhheeeeeEecCCCceeEEEEEec--CCCeEEEEEccccCCC---------------HHHHHHHHHHHHhCCCCCEeeE
Confidence 4468999999999999999999875 6789999998654321 2467889999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+.+..++||||+++++|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nili~~~~~ 142 (267)
T 3t9t_A 69 YGVCLEQAPICLVTEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQV 142 (267)
T ss_dssp EEEECSSSSCEEEECCCTTCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECGGGC
T ss_pred EEEEccCCCeEEEEeCCCCCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCchheEEECCCCC
Confidence 99999999999999999999999999752 34689999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLVKW 573 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~ 573 (633)
+||+|||+++....... .......+|..|+|||++.+..++.++||||+|+++|||++ |+.||..... ...
T Consensus 143 ~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~--- 214 (267)
T 3t9t_A 143 IKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEV--- 214 (267)
T ss_dssp EEECCTTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHH---
T ss_pred EEEcccccccccccccc-cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH----HHH---
Confidence 99999999987654211 11123457889999999998899999999999999999999 8999875321 122
Q ss_pred HHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 574 MRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 574 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
............ .......+.+++.+||+.||++|||++++++.|+++.
T Consensus 215 ~~~i~~~~~~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 215 VEDISTGFRLYK----------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp HHHHHTTCCCCC----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhcCCcCCC----------CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 222221111100 0011233778999999999999999999999999874
No 84
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.5e-41 Score=346.10 Aligned_cols=267 Identities=24% Similarity=0.342 Sum_probs=190.1
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|+..+.||+|+||.||+|... .+|+.||+|++........ ...+.+|++++++++||||++++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~-------------~~~~~~E~~~l~~l~hp~iv~~~ 69 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNK-TTGVYVALKEVKLDSEEGT-------------PSTAIREISLMKELKHENIVRLY 69 (317)
T ss_dssp ---------------CEEEEEECS-SSCCEEEEEEEECCSTTCS-------------CHHHHHHHHHHTTCCBTTBCCEE
T ss_pred ccceeEeeEECCCCCEEEEEEEEC-CCCcEEEEEEeeccccccc-------------HHHHHHHHHHHHhcCCCCcceEE
Confidence 367899999999999999999864 5789999999865432110 34577899999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQ--GRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++.+++..++||||++ |+|.+++..... ....+++..+..++.|+++||+|| |+.+|+||||||+||+++.++
T Consensus 70 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivH~Dlkp~NIl~~~~~ 145 (317)
T 2pmi_A 70 DVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC---HENKILHRDLKPQNLLINKRG 145 (317)
T ss_dssp EEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTC
T ss_pred EEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCChHHeEEcCCC
Confidence 99999999999999997 599999876432 234589999999999999999999 678999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
.+||+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .....
T Consensus 146 ~~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~ 219 (317)
T 2pmi_A 146 QLKLGDFGLARAFGIPVNT--FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND----EEQLK 219 (317)
T ss_dssp CEEECCCSSCEETTSCCCC--CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHH
T ss_pred CEEECcCccceecCCCccc--CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh----HHHHH
Confidence 9999999999876543221 134578999999999876 4689999999999999999999999975322 12222
Q ss_pred HHHHhhccCCc--------------------chhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENP--------------------TRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~--------------------~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+......... ...+...+...........+.+++.+||+.||++|||++|+++
T Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 220 LIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp HHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 22221111100 0000000000001112235788999999999999999999875
No 85
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.2e-41 Score=348.20 Aligned_cols=260 Identities=23% Similarity=0.349 Sum_probs=202.8
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeE----EEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKM----IAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRN 410 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n 410 (633)
..++|++.+.||+|+||.||+|++.. +++. ||+|.+........ ...+.+|+.++++++|||
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~kv~~K~~~~~~~~~~-------------~~~~~~e~~~l~~l~h~~ 76 (325)
T 3kex_A 11 KETELRKLKVLGSGVFGTVHKGVWIP-EGESIKIPVCIKVIEDKSGRQS-------------FQAVTDHMLAIGSLDHAH 76 (325)
T ss_dssp CTTTEEEEEEEECCSSCEEEEEEECC-TTCSCCEEEEEEEECCTTSCSC-------------BCSCCHHHHHHHTCCCTT
T ss_pred CHhHceeeeeeeecCCceEEEEEEcC-CCceEEEEEEEEeccccccHHH-------------HHHHHHHHHHHhcCCCCC
Confidence 34689999999999999999998753 4443 78887754321110 235677899999999999
Q ss_pred ccccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 411 LLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 411 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
|+++++++. .+..++||||+++|+|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+|||++
T Consensus 77 iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~ 149 (325)
T 3kex_A 77 IVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYL---EEHGMVHRNLAARNVLLK 149 (325)
T ss_dssp BCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHH---HHTTCCCSCCSSTTEEES
T ss_pred cCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHH---HhCCCCCCccchheEEEC
Confidence 999999886 45688999999999999998752 34688999999999999999999 677999999999999999
Q ss_pred CCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccch
Q 006739 491 DDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMS 569 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~ 569 (633)
.++.+||+|||+++...............||..|+|||++.+..++.++|||||||++|||++ |+.||..... ..
T Consensus 150 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~ 225 (325)
T 3kex_A 150 SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL----AE 225 (325)
T ss_dssp SSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT----TH
T ss_pred CCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH----HH
Confidence 999999999999998766544433345678889999999999999999999999999999999 9999976432 22
Q ss_pred HHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 570 LVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
..+.+....... ..... ...+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 226 ~~~~~~~~~~~~-~~~~~------------~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 226 VPDLLEKGERLA-QPQIC------------TIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp HHHHHHTTCBCC-CCTTB------------CTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCC-CCCcC------------cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 222222211111 11111 112678889999999999999999999998763
No 86
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=7.6e-42 Score=349.16 Aligned_cols=251 Identities=21% Similarity=0.335 Sum_probs=180.3
Q ss_pred ccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC-CCcccccceeeec
Q 006739 342 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-HRNLLPLLAHMAR 420 (633)
Q Consensus 342 ~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 420 (633)
.+.||+|+||.||+|+.. .+++.||||++.... ...+.+|+.++..+. ||||+++++++.+
T Consensus 16 ~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~-----------------~~~~~~e~~~l~~l~~h~niv~~~~~~~~ 77 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHK-KSNQAFAVKIISKRM-----------------EANTQKEITALKLCEGHPNIVKLHEVFHD 77 (325)
T ss_dssp SCCSEEETTEEEEEEEET-TTCCEEEEEEEEGGG-----------------HHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred CCccccCCCeEEEEEEEC-CCCCEEEEEEEChhh-----------------hhhHHHHHHHHHHhcCCCCeeEEEEEEEc
Confidence 478999999999999875 578999999984321 345678999999997 9999999999999
Q ss_pred CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC---ceEE
Q 006739 421 PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM---EARI 497 (633)
Q Consensus 421 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~---~~kl 497 (633)
....++||||+++|+|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++ .+||
T Consensus 78 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~kl 150 (325)
T 3kn6_A 78 QLHTFLVMELLNGGELFERIKK----KKHFSETEASYIMRKLVSAVSHM---HDVGVVHRDLKPENLLFTDENDNLEIKI 150 (325)
T ss_dssp SSEEEEEECCCCSCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEC----CEEEE
T ss_pred CCEEEEEEEccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCCeecCCCHHHEEEecCCCcccEEE
Confidence 9999999999999999999976 35699999999999999999999 678999999999999998765 7999
Q ss_pred cccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHHHh
Q 006739 498 ADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNV 577 (633)
Q Consensus 498 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 577 (633)
+|||+++........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||.............+.+...
T Consensus 151 ~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i 228 (325)
T 3kn6_A 151 IDFGFARLKPPDNQP--LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI 228 (325)
T ss_dssp CCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHH
T ss_pred eccccceecCCCCCc--ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHH
Confidence 999999876543322 234568999999999999999999999999999999999999997654332223333334333
Q ss_pred hccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 578 MTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 578 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
........ ... .......+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~---~~~----~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 229 KKGDFSFE---GEA----WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp TTTCCCCC---SHH----HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred HcCCCCCC---ccc----ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 33221110 000 0111234788999999999999999998863
No 87
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.5e-41 Score=344.50 Aligned_cols=268 Identities=23% Similarity=0.337 Sum_probs=212.1
Q ss_pred hhhhcCcccccccccccCeeEEEEEec----CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-C
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELP----GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-R 407 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~ 407 (633)
....++|++.+.||+|+||.||+|++. ..+++.||||++...... ...+.+.+|+.++.++ +
T Consensus 23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~~ 89 (316)
T 2xir_A 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-------------SEHRALMSELKILIHIGH 89 (316)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH-------------HHHHHHHHHHHHHHHHCC
T ss_pred ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCc-------------HHHHHHHHHHHHHHhccc
Confidence 345678999999999999999999853 356789999998654321 1145788999999999 6
Q ss_pred CCcccccceeeecCC-ccEEEEecccCCCHHHHHhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 006739 408 HRNLLPLLAHMARPD-CHLLVYEFMKNGSLQDILNDVSQG------------RRELDWLARHKIALGVACGLEYLHISHN 474 (633)
Q Consensus 408 h~niv~l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~ 474 (633)
||||+++++++...+ ..++||||+++|+|.+++...... ...+++..++.++.|+++||+|| |+
T Consensus 90 hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~ 166 (316)
T 2xir_A 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---AS 166 (316)
T ss_dssp CTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHH---HH
T ss_pred CCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHH---Hh
Confidence 999999999987754 489999999999999999864321 22389999999999999999999 67
Q ss_pred CCeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-
Q 006739 475 PRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM- 553 (633)
Q Consensus 475 ~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt- 553 (633)
.+|+||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++
T Consensus 167 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~ 246 (316)
T 2xir_A 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246 (316)
T ss_dssp TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999987765544444455678999999999999999999999999999999998
Q ss_pred CCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 554 GRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 554 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
|+.||..... .......+...... ..... ....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 247 g~~p~~~~~~---~~~~~~~~~~~~~~-~~~~~------------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 247 GASPYPGVKI---DEEFCRRLKEGTRM-RAPDY------------TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp SCCSSTTCCC---SHHHHHHHHHTCCC-CCCTT------------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCcccch---hHHHHHHhccCccC-CCCCC------------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 9999875322 11222222211110 01111 1123778899999999999999999999998863
No 88
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.1e-42 Score=349.78 Aligned_cols=250 Identities=26% Similarity=0.397 Sum_probs=199.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
..+|.+.+.||+|+||.||+|++. .+++.||+|++...... .......+.+|+.+++.++||||++++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~-----------~~~~~~~~~~E~~~l~~l~hpnIv~l~ 75 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHY-KTQQKVALKFISRQLLK-----------KSDMHMRVEREISYLKLLRHPHIIKLY 75 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHHH-----------HTTCSHHHHHHHHHHTTCCCTTBCCEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEehHHcc-----------chhHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 468999999999999999999874 57899999998421100 001134688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+++..++||||+ +|+|.+++.. ...+++..+..++.|++.||+|| |+.+|+||||||+||++++++.+
T Consensus 76 ~~~~~~~~~~lv~E~~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~ 147 (336)
T 3h4j_B 76 DVITTPTDIVMVIEYA-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYC---HRHKIVHRDLKPENLLLDDNLNV 147 (336)
T ss_dssp EEEECSSEEEEEECCC-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCCSTTTEEECTTCCE
T ss_pred EEEEeCCEEEEEEECC-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCchhhEEEcCCCCE
Confidence 9999999999999999 7899998875 34599999999999999999999 67789999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKF-TDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
||+|||++......... ....||+.|+|||++.+..+ +.++||||+||++|+|++|+.||++.........+.
T Consensus 148 kl~DFG~s~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~--- 221 (336)
T 3h4j_B 148 KIADFGLSNIMTDGNFL---KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVN--- 221 (336)
T ss_dssp EECCSSCTBTTTTSBTT---CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCC---
T ss_pred EEEEeccceeccCCccc---ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHH---
Confidence 99999999876554322 33579999999999988776 679999999999999999999997643321111100
Q ss_pred HHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 575 RNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
......+.. ....+.+++.+||+.||.+|||++|+++
T Consensus 222 ---~~~~~~p~~------------~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 222 ---SCVYVMPDF------------LSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp ---SSCCCCCTT------------SCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred ---cCCCCCccc------------CCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 000000111 1123778999999999999999999875
No 89
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.5e-41 Score=348.92 Aligned_cols=267 Identities=23% Similarity=0.329 Sum_probs=211.7
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCC----CeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-C
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSN----GKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-R 407 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~ 407 (633)
....++|+..+.||+|+||.||+|.....+ ...||+|.+...... ...+.+.+|+.+++++ +
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~~ 108 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA-------------DEKEALMSELKIMSHLGQ 108 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCH-------------HHHHHHHHHHHHHHHHCC
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccCh-------------HHHHHHHHHHHHHHhhcC
Confidence 345678999999999999999999875322 248999998654321 1146788999999999 8
Q ss_pred CCcccccceeeecCCccEEEEecccCCCHHHHHhhhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 006739 408 HRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQ----------GRRELDWLARHKIALGVACGLEYLHISHNPRI 477 (633)
Q Consensus 408 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~i 477 (633)
||||+++++++...+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|| |+.+|
T Consensus 109 h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i 185 (333)
T 2i1m_A 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNC 185 (333)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHH---HHTTE
T ss_pred CCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHH---hcCCc
Confidence 99999999999999999999999999999999975431 134689999999999999999999 67799
Q ss_pred eeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCC
Q 006739 478 IHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRL 556 (633)
Q Consensus 478 vH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~ 556 (633)
+||||||+||+++.++.+||+|||+++...............||+.|+|||.+.+..++.++||||||+++|||++ |..
T Consensus 186 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 265 (333)
T 2i1m_A 186 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265 (333)
T ss_dssp ECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred ccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999987655443333344567889999999999899999999999999999999 999
Q ss_pred CCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 557 PSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 557 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
||...... ....+.+........ . ......+.+++..||+.||.+|||+.|+++.|+++
T Consensus 266 p~~~~~~~---~~~~~~~~~~~~~~~-~------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 266 PYPGILVN---SKFYKLVKDGYQMAQ-P------------AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp SSTTCCSS---HHHHHHHHHTCCCCC-C------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcccchh---HHHHHHHhcCCCCCC-C------------CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 98754321 122222222111110 0 01123477899999999999999999999999876
No 90
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=8.4e-42 Score=343.15 Aligned_cols=260 Identities=25% Similarity=0.400 Sum_probs=212.4
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|++.+.||+|+||.||+|.+. .++..||+|.+...... .+++.+|++++++++||||+
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~---------------~~~~~~E~~~l~~l~h~~i~ 72 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTME---------------VEEFLKEAAVMKEIKHPNLV 72 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEG-GGTEEEEEEEECSCSTH---------------HHHHHHHHHHHHHCCCTTBC
T ss_pred cccccceeEEeecCCCCceeEEEeEec-CCCEEEEEEecCcCHHH---------------HHHHHHHHHHHHhCCCCCEe
Confidence 345678999999999999999999875 46899999998653321 45688999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++.+.+..++||||+++++|.+++... ....+++..++.++.|++.||+|| |+.+|+||||||+||+++.+
T Consensus 73 ~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~ 147 (288)
T 3kfa_A 73 QLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGEN 147 (288)
T ss_dssp CEEEEECSSSSEEEEEECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHH---HHHTCCCSCCSGGGEEECGG
T ss_pred eEEEEEccCCCEEEEEEcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHH---HHCCccCCCCCcceEEEcCC
Confidence 9999999999999999999999999999753 245699999999999999999999 67789999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~ 571 (633)
+.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|+|++ |..||..... ....
T Consensus 148 ~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~----~~~~ 222 (288)
T 3kfa_A 148 HLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----SQVY 222 (288)
T ss_dssp GCEEECCCCGGGTSCSSSSE-EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG----GGHH
T ss_pred CCEEEccCccceeccCCccc-cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHH
Confidence 99999999999877654322 2234567889999999999999999999999999999999 9999875322 2222
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
+.+........+ ......+.+++..||+.||++|||+.++++.|+++
T Consensus 223 ~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 223 ELLEKDYRMERP-------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp HHHHTTCCCCCC-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhccCCCCCC-------------CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 222221111111 11123478899999999999999999999999875
No 91
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2e-41 Score=344.77 Aligned_cols=268 Identities=24% Similarity=0.355 Sum_probs=199.7
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCC--CCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGS--NGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRN 410 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n 410 (633)
....++|.+.+.||+|+||.||+|.+... ++..||+|++....... ...+.+.+|+.++++++|||
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~ 97 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQ------------REIEEFLSEAACMKDFSHPN 97 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCH------------HHHHHHHHHHHHHHTCCCTT
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccch------------hHHHHHHHHHHHHhcCCCCC
Confidence 34557899999999999999999987543 45689999986543211 11467889999999999999
Q ss_pred ccccceeeecCCc-----cEEEEecccCCCHHHHHhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCC
Q 006739 411 LLPLLAHMARPDC-----HLLVYEFMKNGSLQDILNDVS--QGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLK 483 (633)
Q Consensus 411 iv~l~~~~~~~~~-----~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dik 483 (633)
|+++++++.+.+. .++||||+++|+|.+++.... .....+++..++.++.|+++||.|| |+.+|+|||||
T Consensus 98 iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dik 174 (313)
T 3brb_A 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLA 174 (313)
T ss_dssp BCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHH---HTTTCCCCCCS
T ss_pred eeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCC
Confidence 9999999977553 489999999999999986432 2346799999999999999999999 68899999999
Q ss_pred CCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccc
Q 006739 484 PANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFF 562 (633)
Q Consensus 484 p~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~ 562 (633)
|+||+++.++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 175 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 254 (313)
T 3brb_A 175 ARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ 254 (313)
T ss_dssp GGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 9999999999999999999987655433333334567889999999999999999999999999999999 888986532
Q ss_pred cccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 563 QHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
. ....+.+.. ...... .......+.+++.+||+.||++|||+.++++.|+++.
T Consensus 255 ~----~~~~~~~~~---~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 255 N----HEMYDYLLH---GHRLKQ----------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp G----GGHHHHHHT---TCCCCC----------BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H----HHHHHHHHc---CCCCCC----------CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2 222222221 111110 0111234788999999999999999999999998873
No 92
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.7e-41 Score=341.87 Aligned_cols=269 Identities=21% Similarity=0.334 Sum_probs=208.1
Q ss_pred hcCcccccccccccCeeEEEEEe---cCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAEL---PGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
...|+..+.||+|+||.||+|++ ...+++.||+|++...... ...+.+.+|++++++++||||+
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~i~ 86 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG-------------NHIADLKKEIEILRNLYHENIV 86 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------------------CCHHHHHHHHHHHHTCCCTTBC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccc-------------hhHHHHHHHHHHHHhCCCCCee
Confidence 35688999999999999999985 3457899999998643211 1145788999999999999999
Q ss_pred ccceeeecC--CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 413 PLLAHMARP--DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 413 ~l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
++++++... ...++||||+++|+|.+++... ...+++..++.++.|++.||+|| |+.+|+||||||+||+++
T Consensus 87 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nil~~ 160 (302)
T 4e5w_A 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVE 160 (302)
T ss_dssp CEEEEEEC---CCEEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEE
T ss_pred eeeeEEecCCCceEEEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHh---hcCCcccCCCchheEEEc
Confidence 999999876 6689999999999999999653 34599999999999999999999 678999999999999999
Q ss_pred CCCceEEcccccccccCCCCCcc-eecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCccccc------
Q 006739 491 DDMEARIADFGLAKAMPDAQTHI-TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQ------ 563 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~------ 563 (633)
.++.+||+|||+++......... ......||..|+|||.+.+..++.++||||+|+++|||++|+.|+.....
T Consensus 161 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 240 (302)
T 4e5w_A 161 SEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMI 240 (302)
T ss_dssp ETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHH
T ss_pred CCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhcc
Confidence 99999999999998876544321 22345688899999999998899999999999999999999998653211
Q ss_pred --ccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhhC
Q 006739 564 --HTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIRH 633 (633)
Q Consensus 564 --~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~~ 633 (633)
..................... ........+.+++.+||+.||.+|||+.|+++.|+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 241 GPTHGQMTVTRLVNTLKEGKRLP----------CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp CSCCGGGHHHHHHHHHHTTCCCC----------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred CCcccccCHHHHHHHHhccCCCC----------CCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 011111112222211111110 111122347889999999999999999999999998753
No 93
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=9.2e-42 Score=357.63 Aligned_cols=259 Identities=22% Similarity=0.300 Sum_probs=202.6
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|++.+.||+|+||.||+|+.. .+++.||+|++.+... ........+.+|+.+++.++|||||
T Consensus 65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~-~~~~~~AiK~~~k~~~-----------~~~~~~~~~~~E~~il~~l~hp~Iv 132 (410)
T 3v8s_A 65 RMKAEDYEVVKVIGRGAFGEVQLVRHK-STRKVYAMKLLSKFEM-----------IKRSDSAFFWEERDIMAFANSPWVV 132 (410)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHH-----------HHTCCCSTHHHHHHHHHHCCCTTBC
T ss_pred ccCccccEEEEEEEcCCCEEEEEEEEC-CCCcEEEEEEEehhhh-----------hhhHHHHHHHHHHHHHHhCCCCCCC
Confidence 345678999999999999999999875 5789999999843110 0001123477899999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++.+.+..|+||||+++|+|.+++.. ..+++..+..++.||+.||+|| |+.+|+||||||+|||++.+
T Consensus 133 ~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~L---H~~givHrDLKp~NILl~~~ 204 (410)
T 3v8s_A 133 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKS 204 (410)
T ss_dssp CEEEEEECSSEEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTT
T ss_pred eEEEEEEECCEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeeECCC
Confidence 999999999999999999999999999874 3589999999999999999999 67899999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCC----CCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLK----FTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
+.+||+|||+++........ ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... .
T Consensus 205 g~ikL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~---~ 280 (410)
T 3v8s_A 205 GHLKLADFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV---G 280 (410)
T ss_dssp SCEEECCCTTCEECCTTSEE-ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH---H
T ss_pred CCEEEeccceeEeeccCCcc-cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh---h
Confidence 99999999999876554322 223567999999999998765 788999999999999999999999753221 1
Q ss_pred hHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCC--CCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRE--RPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--RPs~~ev~~ 626 (633)
...+.+........+.. .. ....+.+++.+||+.+|.+ ||+++|+++
T Consensus 281 ~~~~i~~~~~~~~~p~~--------~~---~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 281 TYSKIMNHKNSLTFPDD--------ND---ISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHHHHHTHHHHCCCCTT--------CC---CCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred HHHHHHhccccccCCCc--------cc---ccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 11111111100010100 01 1123778889999999999 999999875
No 94
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6.7e-41 Score=348.37 Aligned_cols=256 Identities=14% Similarity=0.125 Sum_probs=202.6
Q ss_pred hhhcCcccccccccccCeeEEEEEe----cCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC--
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAEL----PGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-- 407 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-- 407 (633)
...+.|.+.+.||+|+||.||+|.+ ...+++.||+|++.... ..++.+|++++..++
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----------------~~~~~~e~~~~~~l~~~ 124 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----------------PWEFYIGTQLMERLKPS 124 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----------------HHHHHHHHHHHHHSCGG
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----------------hhHHHHHHHHHHHhhhh
Confidence 3457899999999999999999952 23478999999986543 234566677776666
Q ss_pred -CCcccccceeeecCCccEEEEecccCCCHHHHHhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCC
Q 006739 408 -HRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQ-GRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPA 485 (633)
Q Consensus 408 -h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~ 485 (633)
|+||+++++++...+..++||||+++|+|.+++..... ....+++..++.|+.||++||+|| |+.+|+||||||+
T Consensus 125 ~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~l---H~~~ivHrDiKp~ 201 (365)
T 3e7e_A 125 MQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV---HDCEIIHGDIKPD 201 (365)
T ss_dssp GGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGG
T ss_pred hhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH---hhCCeecCCCCHH
Confidence 99999999999999999999999999999999986443 356799999999999999999999 6789999999999
Q ss_pred CeEecC-----------CCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhC
Q 006739 486 NVLLDD-----------DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMG 554 (633)
Q Consensus 486 Nill~~-----------~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg 554 (633)
|||++. ++.+||+|||+|+...............||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 202 NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg 281 (365)
T 3e7e_A 202 NFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFG 281 (365)
T ss_dssp GEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHS
T ss_pred HEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhC
Confidence 999998 899999999999765433333334556799999999999999999999999999999999999
Q ss_pred CCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCC-CCHHHHHHHHHhh
Q 006739 555 RLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRER-PNSKDVRCMLSQI 631 (633)
Q Consensus 555 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R-Ps~~ev~~~l~~~ 631 (633)
+.||.......... ..... .... .+.+.+++..|++.+|.+| |+++++.+.|+++
T Consensus 282 ~~pf~~~~~~~~~~-----------~~~~~--------~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 282 TYMKVKNEGGECKP-----------EGLFR--------RLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp SCCCEEEETTEEEE-----------CSCCT--------TCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred CCccccCCCCceee-----------chhcc--------ccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 99986533211100 00000 0011 2236678889999999998 6788888877664
No 95
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3e-41 Score=347.65 Aligned_cols=248 Identities=19% Similarity=0.266 Sum_probs=202.1
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|+..+.||+|+||.||+|+.. .+|+.||+|++..... ......+.+.+|+++++.++||||++++
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~-----------~~~~~~~~~~~E~~~l~~l~hp~iv~~~ 107 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHK-ESGNHYAMKILDKQKV-----------VKLKQIEHTLNEKRILQAVNFPFLVKLE 107 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHH-----------HHTTCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEEC-CCCCEEEEEEEEhHHh-----------ccHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 468999999999999999999875 5789999999843211 0111245788899999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..|+||||+++|+|.+++... ..+++..+..++.||+.||+|| |+.+|+||||||+|||++.++.+
T Consensus 108 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~ 180 (350)
T 1rdq_E 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYI 180 (350)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCE
T ss_pred EEEEcCCEEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCccceEEECCCCCE
Confidence 9999999999999999999999999863 4589999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ... ..
T Consensus 181 kL~DFg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~---~~ 248 (350)
T 1rdq_E 181 QVTDFGFAKRVKGRT-----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP----IQI---YE 248 (350)
T ss_dssp EECCCTTCEECSSCB-----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH---HH
T ss_pred EEcccccceeccCCc-----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH----HHH---HH
Confidence 999999998765431 345799999999999999999999999999999999999999975321 111 22
Q ss_pred HhhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCC-----HHHHHH
Q 006739 576 NVMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPN-----SKDVRC 626 (633)
Q Consensus 576 ~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs-----~~ev~~ 626 (633)
.+.... ..+.. ....+.+++.+||+.||++||+ ++|+++
T Consensus 249 ~i~~~~~~~p~~------------~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 249 KIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHCCCCCCTT------------CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHcCCCCCCCC------------CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 222211 11111 1223778999999999999998 777764
No 96
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=339.29 Aligned_cols=264 Identities=22% Similarity=0.310 Sum_probs=195.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhh-H-----------HHHHHHHHHHHHHHHHHHHh
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELT-E-----------EDSKLLNKKMRQIRSEINTV 403 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~e~~~l 403 (633)
.++|++.+.||+|+||.||+|+.. .+++.||||++........... . ..........+.+.+|++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNE-NDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEET-TTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEEC-CCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 468999999999999999999864 5789999999875532110000 0 00000011245788999999
Q ss_pred hcCCCCcccccceeeec--CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCC
Q 006739 404 GQIRHRNLLPLLAHMAR--PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRD 481 (633)
Q Consensus 404 ~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~D 481 (633)
++++||||+++++++.+ .+..++||||+++++|.+++. ...+++..+..++.|+++||+|| |+.+|+|||
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~D 162 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYL---HYQKIIHRD 162 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCC
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccC
Confidence 99999999999999986 567899999999999987653 35699999999999999999999 677999999
Q ss_pred CCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCC---CCCccchHHHHHHHHHHHhCCCCC
Q 006739 482 LKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLK---FTDKCDIYSFGVLLAVLVMGRLPS 558 (633)
Q Consensus 482 ikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~~l~elltg~~p~ 558 (633)
|||+||+++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||
T Consensus 163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf 240 (298)
T 2zv2_A 163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240 (298)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCHHHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence 999999999999999999999987755432 223457999999999998765 367899999999999999999998
Q ss_pred cccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 559 DDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.... ...+ ............ ........+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~----~~~~---~~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 241 MDER----IMCL---HSKIKSQALEFP---------DQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp CCSS----HHHH---HHHHHHCCCCCC---------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCcc----HHHH---HHHHhcccCCCC---------CccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 6532 1111 111111111000 00011233788999999999999999999874
No 97
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.5e-41 Score=358.76 Aligned_cols=261 Identities=21% Similarity=0.270 Sum_probs=203.4
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
...++|++.++||+|+||.||+|++. .+++.||+|++.+... ........+.+|..++..++||||++
T Consensus 71 ~~~~~y~~~~~LG~G~fG~V~~~~~~-~~~~~vAvK~~~~~~~-----------~~~~~~~~~~~E~~il~~~~hp~Iv~ 138 (437)
T 4aw2_A 71 LHREDFEILKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEM-----------LKRAETACFREERDVLVNGDSKWITT 138 (437)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEHHHH-----------HHTTTTCCHHHHHHHHHHSCTTTBCC
T ss_pred CChhheEEEEEEEeCCCEEEEEEEEc-CCCcEEEEEEEEHHHh-----------hhHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 34578999999999999999999875 5789999999843110 00011234788999999999999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
++++|.+.+..|+||||+++|+|.+++... ...+++..+..++.|++.||+|| |+.+|+||||||+|||++.++
T Consensus 139 l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~L---H~~giiHrDLKp~NILl~~~g 212 (437)
T 4aw2_A 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSV---HQLHYVHRDIKPDNILMDMNG 212 (437)
T ss_dssp EEEEEECSSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTS
T ss_pred EEEEEeeCCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEecccCHHHeeEcCCC
Confidence 999999999999999999999999999752 35699999999999999999999 678999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQ-----TLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
.+||+|||+++........ ......||+.|+|||++. ...++.++|||||||++|||++|+.||..........
T Consensus 213 ~vkL~DFGla~~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~ 291 (437)
T 4aw2_A 213 HIRLADFGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG 291 (437)
T ss_dssp CEEECCCTTCEECCTTSCE-ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred CEEEcchhhhhhcccCCCc-ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHH
Confidence 9999999999876554332 224467999999999987 4568999999999999999999999997532211111
Q ss_pred hHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCC--CCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRE--RPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--RPs~~ev~~ 626 (633)
.+..+.. .-..+.. .......+.+++.+||..+|++ ||+++|+++
T Consensus 292 ~i~~~~~---~~~~p~~----------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 292 KIMNHKE---RFQFPTQ----------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHTHHH---HCCCCSS----------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred hhhhccc---cccCCcc----------cccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1111111 0011100 0011223778888999988888 999999875
No 98
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.1e-41 Score=346.39 Aligned_cols=252 Identities=27% Similarity=0.383 Sum_probs=200.3
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCcccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLP 413 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~ 413 (633)
..++|++.+.||+|+||.||+|+.. .+|+.||+|++.+... ........+..|..++..+ +||||++
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vaiK~~~~~~~-----------~~~~~~~~~~~E~~il~~~~~hp~iv~ 82 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVV-----------LMDDDVECTMVEKRVLSLAWEHPFLTH 82 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEEHHHH-----------HHTTCHHHHHHHHHHHHHHTTCTTBCC
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhHHh-----------hhhhhHHHHHHHHHHHHhcCCCCCCCc
Confidence 4578999999999999999999875 5789999999853211 0011144577888888876 8999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++.+.+..|+||||+++|+|.+++... ..+++..+..++.||+.||+|| |+.+|+||||||+||+++.++
T Consensus 83 l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g 155 (345)
T 1xjd_A 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGLQFL---HSKGIVYRDLKLDNILLDKDG 155 (345)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTS
T ss_pred EEEEEEeCCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCChhhEEECCCC
Confidence 999999999999999999999999999763 4589999999999999999999 678999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKW 573 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~ 573 (633)
.+||+|||+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ...+.+.
T Consensus 156 ~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~----~~~~~~~ 229 (345)
T 1xjd_A 156 HIKIADFGMCKENMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD----EEELFHS 229 (345)
T ss_dssp CEEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHH
T ss_pred CEEEeEChhhhhcccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC----HHHHHHH
Confidence 999999999986543222 1244679999999999999999999999999999999999999997532 1222222
Q ss_pred HHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHH-HHH
Q 006739 574 MRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSK-DVR 625 (633)
Q Consensus 574 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~-ev~ 625 (633)
+.. ........ ....+.+++.+||+.||++||++. |++
T Consensus 230 i~~--~~~~~p~~------------~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 230 IRM--DNPFYPRW------------LEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp HHH--CCCCCCTT------------SCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred HHh--CCCCCCcc------------cCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 211 11111111 112377889999999999999997 553
No 99
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.3e-41 Score=347.22 Aligned_cols=254 Identities=22% Similarity=0.368 Sum_probs=197.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|++. .+|+.||||++....... ..+.+.+|++++++++||||++++
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~hpniv~~~ 70 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNK-VDDCNYAIKRIRLPNREL-------------AREKVMREVKALAKLEHPGIVRYF 70 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEET-TTCCEEEEEEEECCSTTT-------------HHHHHHHHHHHHTSCCCTTBCCEE
T ss_pred hhcCceeeEecCCCCeEEEEEEEc-CCCcEEEEEEeecCCchh-------------HHHHHHHHHHHHHhCCCCCEeeEE
Confidence 357899999999999999999875 578999999986543211 146789999999999999999999
Q ss_pred eeeecCC---------------------------------------------------------ccEEEEecccCCCHHH
Q 006739 416 AHMARPD---------------------------------------------------------CHLLVYEFMKNGSLQD 438 (633)
Q Consensus 416 ~~~~~~~---------------------------------------------------------~~~lv~e~~~~gsL~~ 438 (633)
+++.+.. ..++||||+++|+|.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~ 150 (332)
T 3qd2_B 71 NAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKD 150 (332)
T ss_dssp EEEEECCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHH
T ss_pred EEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHH
Confidence 9986543 2789999999999999
Q ss_pred HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceEEcccccccccCCCCCc------
Q 006739 439 ILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTH------ 512 (633)
Q Consensus 439 ~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~------ 512 (633)
++..... ....++..++.++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++........
T Consensus 151 ~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~ 226 (332)
T 3qd2_B 151 WMNRRCS-LEDREHGVCLHIFIQIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226 (332)
T ss_dssp HHHTCCS-GGGSCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC---------
T ss_pred HHhcccC-ccchhhHHHHHHHHHHHHHHHHH---HhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccccc
Confidence 9986332 34567788999999999999999 6789999999999999999999999999999887654221
Q ss_pred ----ceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHHHhhccCCcchhhh
Q 006739 513 ----ITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAID 588 (633)
Q Consensus 513 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 588 (633)
.......||+.|+|||++.+..++.++||||+||++|||++|..|+... ........... ....
T Consensus 227 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~---------~~~~~~~~~~~-~~~~-- 294 (332)
T 3qd2_B 227 MPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER---------VRIITDVRNLK-FPLL-- 294 (332)
T ss_dssp -----CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH---------HHHHHHHHTTC-CCHH--
T ss_pred ccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH---------HHHHHHhhccC-CCcc--
Confidence 1123456999999999999999999999999999999999998774321 11111111111 1111
Q ss_pred hhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 589 AKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 589 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.......+.+++.+||+.||++|||++|+++
T Consensus 295 -------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 295 -------FTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp -------HHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred -------cccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 1112234678999999999999999999986
No 100
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=8.8e-42 Score=364.53 Aligned_cols=258 Identities=26% Similarity=0.411 Sum_probs=202.1
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|+..+.||+|+||.||+|.+. ++..||||++...... .+++.+|++++++++||||+
T Consensus 180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~---------------~~~~~~E~~~l~~l~hp~iv 242 (452)
T 1fmk_A 180 EIPRESLRLEVKLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMS---------------PEAFLQEAQVMKKLRHEKLV 242 (452)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEET--TTEEEEEEECCTTSSC---------------HHHHHHHHHHHHHCCCTTBC
T ss_pred ccChhHceeeeeecCCCCeEEEEEEEC--CCceEEEEEeccCCCC---------------HHHHHHHHHHHHhCCCCCEe
Confidence 345578899999999999999999985 5678999998654321 34688999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++.+ +..++||||+++|+|.+++.... ...+++..+..++.|+++||+|| |+.+|+||||||+|||++++
T Consensus 243 ~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~ 316 (452)
T 1fmk_A 243 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGEN 316 (452)
T ss_dssp CEEEEECS-SSCEEEECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGG
T ss_pred eEEEEEcC-CceEEEehhhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChhhEEECCC
Confidence 99999876 67899999999999999997532 34589999999999999999999 67899999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~ 571 (633)
+.+||+|||+++........ ......+|..|+|||.+.+..++.++|||||||++|||++ |+.||..... ....
T Consensus 317 ~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~----~~~~ 391 (452)
T 1fmk_A 317 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVL 391 (452)
T ss_dssp GCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHH
T ss_pred CCEEECCCccceecCCCcee-cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH----HHHH
Confidence 99999999999876543221 1233457889999999999999999999999999999999 9999875322 1222
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
+.+ ....... .+......+.+++.+||+.||++|||++++++.|+++
T Consensus 392 ~~i---~~~~~~~----------~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~ 438 (452)
T 1fmk_A 392 DQV---ERGYRMP----------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438 (452)
T ss_dssp HHH---HTTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred HHH---HcCCCCC----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 222 2221111 0111223477899999999999999999999999886
No 101
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.2e-41 Score=346.43 Aligned_cols=251 Identities=25% Similarity=0.364 Sum_probs=187.7
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|++.+.||+|+||.||+|+.. .+++.||||++..... .+.+.+|++++++++||||++++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~----------------~~~~~~E~~~l~~l~h~niv~~~ 114 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQK-GTQKPYALKVLKKTVD----------------KKIVRTEIGVLLRLSHPNIIKLK 114 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEC--------------------------CHHHHHCCCTTBCCEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEEC-CCCcEEEEEEeccchh----------------HHHHHHHHHHHHhCCCCCCccee
Confidence 467999999999999999999875 4688999999864321 34678899999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC---C
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD---D 492 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~---~ 492 (633)
+++.+.+..++||||+++|+|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+||+++. +
T Consensus 115 ~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dikp~NIll~~~~~~ 187 (349)
T 2w4o_A 115 EIFETPTEISLVLELVTGGELFDRIVE----KGYYSERDAADAVKQILEAVAYL---HENGIVHRDLKPENLLYATPAPD 187 (349)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEESSSSTT
T ss_pred eeEecCCeEEEEEEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCcccEEEecCCCC
Confidence 999999999999999999999999864 35689999999999999999999 6779999999999999975 8
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+.+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 188 ~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~- 260 (349)
T 2w4o_A 188 APLKIADFGLSKIVEHQVL---MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG---DQFMF- 260 (349)
T ss_dssp CCEEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC---HHHHH-
T ss_pred CCEEEccCccccccCcccc---cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc---cHHHH-
Confidence 8999999999987654322 2345799999999999999999999999999999999999999865322 11111
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.......... .. .........+.+++.+||+.||++|||+.|+++
T Consensus 261 --~~i~~~~~~~--~~-----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 261 --RRILNCEYYF--IS-----PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp --HHHHTTCCCC--CT-----TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --HHHHhCCCcc--CC-----chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111100 00 001112234778999999999999999999986
No 102
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=355.11 Aligned_cols=272 Identities=20% Similarity=0.284 Sum_probs=211.0
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|.+.+.||+|+||.||+|++. .+|+.||||++....... ..+.+.+|++++++++||||++++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~-------------~~~~~~~E~~~l~~l~hpnIv~~~ 73 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLR-------------PVDVQMREFEVLKKLNHKNIVKLF 73 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECGGGGGS-------------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEEC-CCCcEEEEEEeccccccc-------------hHHHHHHHHHHHHhcCCCCCCeEE
Confidence 467999999999999999999875 568999999985422110 134677899999999999999999
Q ss_pred eeeecCC--ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe----
Q 006739 416 AHMARPD--CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL---- 489 (633)
Q Consensus 416 ~~~~~~~--~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill---- 489 (633)
+++.... ..++||||+++|+|.+++..... ...+++..++.++.|++.||+|| |+.+|+||||||+||++
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~ 149 (396)
T 4eut_A 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGE 149 (396)
T ss_dssp EEEECTTTCCEEEEECCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEECT
T ss_pred EeeccCCCCeeEEEEecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHH---HHCCEEECCcCHHHEEEeecC
Confidence 9988755 67999999999999999976432 33499999999999999999999 67899999999999999
Q ss_pred cCCCceEEcccccccccCCCCCcceecccccCccccccccccc--------CCCCCccchHHHHHHHHHHHhCCCCCccc
Q 006739 490 DDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT--------LKFTDKCDIYSFGVLLAVLVMGRLPSDDF 561 (633)
Q Consensus 490 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~s~G~~l~elltg~~p~~~~ 561 (633)
+.++.+||+|||+++........ ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 150 ~~~~~~kL~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~ 226 (396)
T 4eut_A 150 DGQSVYKLTDFGAARELEDDEQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (396)
T ss_dssp TSCEEEEECCGGGCEECCCGGGS---SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred CCceeEEEecCCCceEccCCCcc---ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 77888999999999877554321 33579999999998865 46778999999999999999999999764
Q ss_pred ccccccchHHHHHHHhhccCCcch---h---------hhhh--hhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHH
Q 006739 562 FQHTEEMSLVKWMRNVMTSENPTR---A---------IDAK--LLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCM 627 (633)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~---~---------~d~~--~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~ 627 (633)
......... +........... . .... ............+.+++..||+.||++||++.|+++.
T Consensus 227 ~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 227 EGPRRNKEV---MYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp TCTTTCHHH---HHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred CcccchHHH---HHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 433322222 222222211100 0 0000 0112235566678899999999999999999999999
Q ss_pred HHhh
Q 006739 628 LSQI 631 (633)
Q Consensus 628 l~~~ 631 (633)
++++
T Consensus 304 l~~i 307 (396)
T 4eut_A 304 TSDI 307 (396)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
No 103
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.9e-41 Score=343.13 Aligned_cols=261 Identities=20% Similarity=0.287 Sum_probs=195.0
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||||++........ .....+.+|+.++++++||||++++
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~hp~iv~~~ 78 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDL-RDHRDVAVKVLRADLARDP-----------SFYLRFRREAQNAAALNHPAIVAVY 78 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECTTTTTSH-----------HHHHHHHHHHTTCCCCCCTTBCCEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEEC-CCCceEEEEEeCccccCCH-----------HHHHHHHHHHHHHHcCCCCCcceEE
Confidence 468999999999999999999864 5799999999865432111 1245788999999999999999999
Q ss_pred eeeecCCcc----EEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC
Q 006739 416 AHMARPDCH----LLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD 491 (633)
Q Consensus 416 ~~~~~~~~~----~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~ 491 (633)
+++...... ++||||+++++|.+++... ..+++..++.++.|++.||+|| |+.+|+||||||+||+++.
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~ 151 (311)
T 3ork_A 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFS---HQNGIIHRDVKPANIMISA 151 (311)
T ss_dssp EEEEEEETTEEEEEEEEECCCEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEET
T ss_pred EeeeccCCCCcccEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH---HHCCCCcCCCCHHHEEEcC
Confidence 998766544 9999999999999999753 4589999999999999999999 6789999999999999999
Q ss_pred CCceEEcccccccccCCCCCc-ceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchH
Q 006739 492 DMEARIADFGLAKAMPDAQTH-ITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSL 570 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~ 570 (633)
++.+||+|||+++........ .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... .
T Consensus 152 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~----~-- 225 (311)
T 3ork_A 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP----V-- 225 (311)
T ss_dssp TSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH----H--
T ss_pred CCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh----H--
Confidence 999999999999876544322 122345689999999999999999999999999999999999999965321 1
Q ss_pred HHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHH-HHHH
Q 006739 571 VKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVR-CMLS 629 (633)
Q Consensus 571 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~-~~l~ 629 (633)
.............. ...... ....+.+++.+||+.||++||++.+++ +.+.
T Consensus 226 -~~~~~~~~~~~~~~----~~~~~~---~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 226 -SVAYQHVREDPIPP----SARHEG---LSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp -HHHHHHHHCCCCCH----HHHSTT---CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred -HHHHHHhcCCCCCc----ccccCC---CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 11111111111111 000111 123377888999999999999776655 4443
No 104
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.4e-41 Score=346.85 Aligned_cols=278 Identities=17% Similarity=0.211 Sum_probs=202.9
Q ss_pred hcCcccccccccccCeeEEEEEecC--CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPG--SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
.++|++.+.||+|+||.||+|+... .++..+|+|++........ .+...........+.+|+..+..++||||++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~---~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~ 112 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLF---SELKFYQRVAKKDCIKKWIERKQLDYLGIPL 112 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHH---HHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchH---HHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence 4679999999999999999998753 2678999999876543211 1111111222346788999999999999999
Q ss_pred cceeeec----CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 414 LLAHMAR----PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 414 l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++++.. ....++||||+ +++|.+++... ..+++..++.++.||+.||+|| |+.+|+||||||+||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll 184 (345)
T 2v62_A 113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN----GTFKKSTVLQLGIRMLDVLEYI---HENEYVHGDIKAANLLL 184 (345)
T ss_dssp EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG----GBCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEE
T ss_pred eecccccccCCCcEEEEEEecc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCcCHHHEEE
Confidence 9999977 67889999999 99999999753 3699999999999999999999 67799999999999999
Q ss_pred cCCC--ceEEcccccccccCCCCCcc-----eecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccc
Q 006739 490 DDDM--EARIADFGLAKAMPDAQTHI-----TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFF 562 (633)
Q Consensus 490 ~~~~--~~kl~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~ 562 (633)
+.++ .+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 264 (345)
T 2v62_A 185 GYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNL 264 (345)
T ss_dssp ESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGT
T ss_pred ccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 9877 99999999998765332111 1134579999999999999899999999999999999999999996532
Q ss_pred cccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 563 QHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
.. ...... .........+. .+........ ....+.+++..||+.||++|||++++++.|+++
T Consensus 265 ~~--~~~~~~-~~~~~~~~~~~-~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 265 KD--PVAVQT-AKTNLLDELPQ-SVLKWAPSGS---SCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp TC--HHHHHH-HHHHHHHTTTH-HHHHHSCTTS---CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred cc--cHHHHH-HHHhhcccccH-HHHhhccccc---cHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 21 111111 11111111111 1111111111 123478888899999999999999999999875
No 105
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=338.22 Aligned_cols=247 Identities=19% Similarity=0.291 Sum_probs=190.8
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCcccccc
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLPLL 415 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~ 415 (633)
++|+..++||+|+||+||+|+.. .+|+.||||++......... ..++..|+..+.++ +||||++++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~------------~~~~~~e~~~~~~~~~h~~iv~l~ 123 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSK-EDGRLYAVKRSMSPFRGPKD------------RARKLAEVGSHEKVGQHPCCVRLE 123 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEET-TTSCEEEEEEESSSCCSHHH------------HHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hheeeeheeccCCCeEEEEEEEC-CCCeEEEEEEecccccChHH------------HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 57899999999999999999875 57899999997654432111 22334444444444 899999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..++||||+ +++|.+++... +..+++..++.++.|++.||+|| |+.+|+||||||+|||++.++.+
T Consensus 124 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~ 196 (311)
T 3p1a_A 124 QAWEEGGILYLQTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHL---HSQGLVHLDVKPANIFLGPRGRC 196 (311)
T ss_dssp EEEEETTEEEEEEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECGGGCE
T ss_pred EEEEeCCEEEEEEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEECCCCCE
Confidence 9999999999999999 67999988753 35699999999999999999999 57799999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
||+|||+++....... .....||+.|+|||++.+ .++.++|||||||++|||++|..|+..... + .
T Consensus 197 kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---------~-~ 262 (311)
T 3p1a_A 197 KLGDFGLLVELGTAGA---GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---------W-Q 262 (311)
T ss_dssp EECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---------H-H
T ss_pred EEccceeeeecccCCC---CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---------H-H
Confidence 9999999987654332 234569999999999876 799999999999999999999777543211 1 1
Q ss_pred HhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 576 NVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 576 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
...... .. +...... ...+.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~-~~----~~~~~~~----~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 263 QLRQGY-LP----PEFTAGL----SSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHTTTC-CC----HHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHhccC-CC----cccccCC----CHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 111111 11 1111111 234788999999999999999999986
No 106
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.3e-41 Score=347.62 Aligned_cols=266 Identities=19% Similarity=0.333 Sum_probs=210.7
Q ss_pred hhhhcCcccccccccccCeeEEEEEecC----CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRH 408 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h 408 (633)
....++|++.+.||+|+||.||+|++.+ .+++.||+|.+...... +....+.+|+.++++++|
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h 87 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-------------RERIEFLNEASVMKEFNC 87 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCH-------------HHHHHHHHHHHHGGGCCC
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCH-------------HHHHHHHHHHHHHHhcCC
Confidence 3456789999999999999999997642 35789999998643311 114568899999999999
Q ss_pred CcccccceeeecCCccEEEEecccCCCHHHHHhhhcC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCC
Q 006739 409 RNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQ------GRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDL 482 (633)
Q Consensus 409 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Di 482 (633)
|||+++++++.+.+..++||||+++|+|.+++..... ....+++..++.++.|+++||+|| |+.+|+||||
T Consensus 88 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~di 164 (322)
T 1p4o_A 88 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDL 164 (322)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCC
T ss_pred CCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCCccCCC
Confidence 9999999999999999999999999999999976331 124578999999999999999999 6779999999
Q ss_pred CCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCccc
Q 006739 483 KPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDF 561 (633)
Q Consensus 483 kp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~ 561 (633)
||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 165 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 244 (322)
T 1p4o_A 165 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244 (322)
T ss_dssp SGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred ccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC
Confidence 99999999999999999999986654332222233457899999999999899999999999999999999 88998653
Q ss_pred ccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 562 FQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
.. ......+ ....... ........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 245 ~~----~~~~~~~---~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 245 SN----EQVLRFV---MEGGLLD----------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp CH----HHHHHHH---HTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred CH----HHHHHHH---HcCCcCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 21 2222222 1111111 0111123477899999999999999999999999875
No 107
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1e-40 Score=347.79 Aligned_cols=253 Identities=22% Similarity=0.286 Sum_probs=203.3
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|++.+.||+|+||.||+|... .+|+.||+|++...... ....+.+|+.++++++||||++++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~~--------------~~~~~~~E~~il~~l~hpnIv~~~ 114 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEK-ATGRVFVAKFINTPYPL--------------DKYTVKNEISIMNQLHHPKLINLH 114 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCSHH--------------HHHHHHHHHHHHTTCCSTTBCCEE
T ss_pred ccceEEEEEEecCCCEEEEEEEEC-CCCCEEEEEEecccchh--------------hHHHHHHHHHHHHhCCCcCCCeEE
Confidence 468999999999999999999865 57899999998654310 134688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC--CC
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD--DM 493 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~--~~ 493 (633)
+++.+....++||||+++|+|.+++.. ....+++..+..++.||+.||+|| |+.+|+||||||+|||++. ++
T Consensus 115 ~~~~~~~~~~lv~E~~~gg~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~ 188 (387)
T 1kob_A 115 DAFEDKYEMVLILEFLSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHM---HEHSIVHLDIKPENIMCETKKAS 188 (387)
T ss_dssp EEEECSSEEEEEEECCCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSTTCC
T ss_pred EEEEeCCEEEEEEEcCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccchHHeEEecCCCC
Confidence 999999999999999999999999864 234689999999999999999999 6789999999999999974 57
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKW 573 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~ 573 (633)
.+||+|||+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 189 ~vkL~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~----~~~~~~ 261 (387)
T 1kob_A 189 SVKIIDFGLATKLNPDEIV---KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD----LETLQN 261 (387)
T ss_dssp CEEECCCTTCEECCTTSCE---EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHHHH
T ss_pred ceEEEecccceecCCCcce---eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH----HHHHHH
Confidence 7999999999887654322 234799999999999999999999999999999999999999975321 122222
Q ss_pred HHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 574 MRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 574 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
+.. ..... +... .......+.+++.+||+.||++|||+.|+++
T Consensus 262 i~~---~~~~~---~~~~----~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 262 VKR---CDWEF---DEDA----FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp HHH---CCCCC---CSST----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHh---CCCCC---Cccc----cccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 211 11110 0000 1111234788999999999999999999986
No 108
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.6e-41 Score=342.53 Aligned_cols=264 Identities=23% Similarity=0.342 Sum_probs=198.1
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccce
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA 416 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 416 (633)
++|++.+.||+|+||.||+|+.. .+|+.||+|++....... ...+.+.+|++++++++||||+++++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~i~~~~~ 69 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNR-DTGQIVAIKKFLESEDDP------------VIKKIALREIRMLKQLKHPNLVNLLE 69 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECCCCC-H------------HHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeC-CCCcEEEEEEeeccccch------------HHHHHHHHHHHHHHhCCCCCccchhh
Confidence 57899999999999999999874 568999999986544221 11456788999999999999999999
Q ss_pred eeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceE
Q 006739 417 HMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEAR 496 (633)
Q Consensus 417 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~k 496 (633)
++.+.+..++||||+++++|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+|
T Consensus 70 ~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~k 142 (311)
T 4agu_A 70 VFRRKRRLHLVFEYCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFC---HKHNCIHRDVKPENILITKHSVIK 142 (311)
T ss_dssp EEEETTEEEEEEECCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEE
T ss_pred eeecCCeEEEEEEeCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCCChhhEEEcCCCCEE
Confidence 99999999999999999999998764 35689999999999999999999 678999999999999999999999
Q ss_pred EcccccccccCCCCCcceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 497 IADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 497 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
|+|||+++........ .....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... .....+.
T Consensus 143 l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~ 216 (311)
T 4agu_A 143 LCDFGFARLLTGPSDY--YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV----DQLYLIR 216 (311)
T ss_dssp ECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHH
T ss_pred EeeCCCchhccCcccc--cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHH
Confidence 9999999876643322 134578999999999876 67899999999999999999999999754321 1111121
Q ss_pred HhhccCCc-----------------chhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 576 NVMTSENP-----------------TRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 576 ~~~~~~~~-----------------~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
........ ....+........+.....+.+++.+||+.||++|||++|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 217 KTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred HHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 11111000 0000000000000112234788999999999999999999985
No 109
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5.1e-41 Score=352.40 Aligned_cols=211 Identities=23% Similarity=0.343 Sum_probs=178.9
Q ss_pred hhhhcCcccccccccc--cCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 006739 333 LEKEDGLASLEKIGSG--GCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRN 410 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G--~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n 410 (633)
....++|++.+.||+| +||.||+|+.. .+|+.||||++...... .+..+.+.+|+.++++++|||
T Consensus 21 ~~~~~~y~~~~~lG~G~~~~g~V~~~~~~-~~~~~vavK~~~~~~~~------------~~~~~~~~~E~~~l~~l~h~n 87 (389)
T 3gni_B 21 LPEGGCYELLTVIGKGFEDLMTVNLARYK-PTGEYVTVRRINLEACS------------NEMVTFLQGELHVSKLFNHPN 87 (389)
T ss_dssp CCCGGGEEEEEEEEEETTTTEEEEEEEET-TTCCEEEEEEEEGGGSC------------HHHHHHHHHHHHHHHHCCCTT
T ss_pred cCCCCcEEEEecccCCcCCceEEEEEEEc-CCCCEEEEEEecccccC------------hHHHHHHHHHHHHHHhCCCCC
Confidence 3455789999999999 99999999875 57899999998643221 112567889999999999999
Q ss_pred ccccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 411 LLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 411 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
||++++++.+.+..++||||+++|+|.+++.... ...+++..+..++.||++||+|| |+.+|+||||||+|||++
T Consensus 88 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~NIll~ 162 (389)
T 3gni_B 88 IVPYRATFIADNELWVVTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYI---HHMGYVHRSVKASHILIS 162 (389)
T ss_dssp BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEC
T ss_pred CCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEc
Confidence 9999999999999999999999999999997632 35699999999999999999999 678999999999999999
Q ss_pred CCCceEEcccccccccCCCCC-----cceecccccCccccccccccc--CCCCCccchHHHHHHHHHHHhCCCCCccc
Q 006739 491 DDMEARIADFGLAKAMPDAQT-----HITTSNVAGTVGYIAPEYHQT--LKFTDKCDIYSFGVLLAVLVMGRLPSDDF 561 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~elltg~~p~~~~ 561 (633)
.++.+||+|||.+........ ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.
T Consensus 163 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 163 VDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp TTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 999999999999865432211 111233478999999999987 67899999999999999999999999764
No 110
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.5e-41 Score=344.61 Aligned_cols=247 Identities=25% Similarity=0.308 Sum_probs=197.7
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCcccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLP 413 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~ 413 (633)
..++|+..+.||+|+||.||+|+.. .+++.||+|++.+... ........+.+|..++..+ +||||++
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~AiK~~~~~~~-----------~~~~~~~~~~~E~~~l~~~~~hp~iv~ 85 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERK-GTDELYAVKILKKDVV-----------IQDDDVECTMVEKRVLALPGKPPFLTQ 85 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEET-TEEEEEEEEEEEHHHH-----------HHTTCHHHHHHHHHHHTCTTCCTTBCC
T ss_pred chHHcEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHh-----------hcchHHHHHHHHHHHHHhcCCCCEEee
Confidence 3478999999999999999999875 5689999999853211 0111245678899999988 7999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++.+.+..|+||||+++|+|.+++... ..+++..++.++.||+.||+|| |+.+|+||||||+|||++.++
T Consensus 86 l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g 158 (353)
T 2i0e_A 86 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEG 158 (353)
T ss_dssp EEEEEECSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTS
T ss_pred EEEEEEcCCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH---HHCCEEeccCCHHHEEEcCCC
Confidence 999999999999999999999999999763 4599999999999999999999 678999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKW 573 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~ 573 (633)
.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+
T Consensus 159 ~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~----~~~~--- 229 (353)
T 2i0e_A 159 HIKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED----EDEL--- 229 (353)
T ss_dssp CEEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHH---
T ss_pred cEEEEeCCcccccccCCc--ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC----HHHH---
Confidence 999999999986433222 2244679999999999999999999999999999999999999997532 1122
Q ss_pred HHHhhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCH
Q 006739 574 MRNVMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNS 621 (633)
Q Consensus 574 ~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 621 (633)
...+.... ..+.. ....+.+++.+||+.||++||++
T Consensus 230 ~~~i~~~~~~~p~~------------~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 230 FQSIMEHNVAYPKS------------MSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp HHHHHHCCCCCCTT------------SCHHHHHHHHHHTCSCTTSCTTC
T ss_pred HHHHHhCCCCCCCC------------CCHHHHHHHHHHhhcCHHHcCCC
Confidence 22222211 11111 11237789999999999999964
No 111
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2e-41 Score=338.78 Aligned_cols=258 Identities=27% Similarity=0.438 Sum_probs=206.3
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|++.+.||+|+||.||+|... ++..||+|.+...... .+.+.+|++++++++||||+
T Consensus 9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~---------------~~~~~~E~~~l~~l~h~~i~ 71 (279)
T 1qpc_A 9 EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSMS---------------PDAFLAEANLMKQLQHQRLV 71 (279)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEET--TTEEEEEEEECTTSSC---------------HHHHHHHHHHHHHCCCTTBC
T ss_pred ccCHHhhhheeeecCCCCeEEEEEEEc--CCcEEEEEEecCCccc---------------HHHHHHHHHHHHhCCCcCcc
Confidence 344578999999999999999999875 6788999998654321 34688899999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++.. +..++||||+++++|.+++.... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++++
T Consensus 72 ~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nil~~~~ 145 (279)
T 1qpc_A 72 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVSDT 145 (279)
T ss_dssp CEEEEECS-SSCEEEEECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTT
T ss_pred eEEEEEcC-CCcEEEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHhhEEEcCC
Confidence 99998864 56899999999999999997532 23689999999999999999999 67899999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~ 571 (633)
+.+||+|||+++........ ......+|..|+|||.+.+..++.++||||||+++|||++ |+.||..... ....
T Consensus 146 ~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~~ 220 (279)
T 1qpc_A 146 LSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN----PEVI 220 (279)
T ss_dssp SCEEECCCTTCEECSSSCEE-CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHH
T ss_pred CCEEECCCcccccccCcccc-cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH----HHHH
Confidence 99999999999877653321 1233457889999999988889999999999999999999 9999865321 1222
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
+.+ ........ .......+.+++..|++.||++|||++++++.|+++
T Consensus 221 ~~~---~~~~~~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 221 QNL---ERGYRMVR----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp HHH---HTTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHH---hcccCCCC----------cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 222 11111100 011123478899999999999999999999999886
No 112
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-40 Score=341.04 Aligned_cols=266 Identities=25% Similarity=0.375 Sum_probs=197.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhh--cCCCCcccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVG--QIRHRNLLP 413 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~--~l~h~niv~ 413 (633)
.++|++.+.||+|+||.||+|++ .++.||||++.... ...+.+|.+++. .++||||++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~-----------------~~~~~~e~~~~~~~~~~h~~i~~ 95 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKW---RGEKVAVKVFFTTE-----------------EASWFRETEIYQTVLMRHENILG 95 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE---TTEEEEEEEEEGGG-----------------HHHHHHHHHHHTSTTCCCTTBCC
T ss_pred ccceEEEeEeecCCCeEEEEEEE---CCceEEEEEEeccc-----------------cchhhhHHHHHHHHhhcCCCeee
Confidence 46899999999999999999987 58999999984321 122333444444 458999999
Q ss_pred cceeeecC----CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeeCCCCC
Q 006739 414 LLAHMARP----DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHIS-----HNPRIIHRDLKP 484 (633)
Q Consensus 414 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~-----h~~~ivH~Dikp 484 (633)
+++++... ...++||||+++|+|.++++. ..+++..++.++.|++.||+|||.. +..+|+||||||
T Consensus 96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp 170 (337)
T 3mdy_A 96 FIAADIKGTGSWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKS 170 (337)
T ss_dssp EEEEEEESCGGGCEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCG
T ss_pred EEEEEccCCCCCCceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccch
Confidence 99999877 678999999999999999974 3589999999999999999999532 133999999999
Q ss_pred CCeEecCCCceEEcccccccccCCCCCcc--eecccccCcccccccccccCCCCCc------cchHHHHHHHHHHHhC--
Q 006739 485 ANVLLDDDMEARIADFGLAKAMPDAQTHI--TTSNVAGTVGYIAPEYHQTLKFTDK------CDIYSFGVLLAVLVMG-- 554 (633)
Q Consensus 485 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~s~G~~l~elltg-- 554 (633)
+||+++.++.+||+|||+++......... ......||+.|+|||++.+..++.+ +|||||||++|||++|
T Consensus 171 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~ 250 (337)
T 3mdy_A 171 KNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCV 250 (337)
T ss_dssp GGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccC
Confidence 99999999999999999998765433221 1124579999999999988776665 9999999999999999
Q ss_pred --------CCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 555 --------RLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 555 --------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
+.||......... ............ ......... ........+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 324 (337)
T 3mdy_A 251 SGGIVEEYQLPYHDLVPSDPS--YEDMREIVCIKK-LRPSFPNRW---SSDECLRQMGKLMTECWAHNPASRLTALRVKK 324 (337)
T ss_dssp BTTBCCCCCCTTTTTSCSSCC--HHHHHHHHTTSC-CCCCCCGGG---GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cccccccccccHhhhcCCCCc--hhhhHHHHhhhc-cCccccccc---hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHH
Confidence 6666543322211 111111111111 111111110 11245566889999999999999999999999
Q ss_pred HHHhhh
Q 006739 627 MLSQIR 632 (633)
Q Consensus 627 ~l~~~~ 632 (633)
.|+++.
T Consensus 325 ~L~~l~ 330 (337)
T 3mdy_A 325 TLAKMS 330 (337)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
No 113
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.3e-41 Score=345.96 Aligned_cols=253 Identities=23% Similarity=0.367 Sum_probs=193.2
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC--Ccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRH--RNLLP 413 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~ 413 (633)
.+.|++.+.||+|+||.||++... +++.||||++.....+. ...+.+.+|+.++.+++| +||++
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~~~~~~iv~ 73 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEADN------------QTLDSYRNEIAYLNKLQQHSDKIIR 73 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT--TSCEEEEEEEECTTCCH------------HHHHHHHHHHHHHHHHTTTCTTBCC
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC--CCCEEEEEEeeccccch------------HHHHHHHHHHHHHHhhhhcCCceEE
Confidence 467999999999999999999874 78999999986543221 124678899999999986 99999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++.+.+..++|||| .+++|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+|||++ ++
T Consensus 74 ~~~~~~~~~~~~lv~e~-~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~l---H~~~iiHrDikp~NIll~-~~ 144 (343)
T 3dbq_A 74 LYDYEITDQYIYMVMEC-GNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DG 144 (343)
T ss_dssp EEEEEECSSEEEEEECC-CSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEE-TT
T ss_pred EeeeEeeCCEEEEEEeC-CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCcceEEEE-CC
Confidence 99999999999999995 58899999986 35689999999999999999999 677999999999999997 57
Q ss_pred ceEEcccccccccCCCCCcceecccccCccccccccccc-----------CCCCCccchHHHHHHHHHHHhCCCCCcccc
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-----------LKFTDKCDIYSFGVLLAVLVMGRLPSDDFF 562 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~ 562 (633)
.+||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 145 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 224 (343)
T 3dbq_A 145 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 224 (343)
T ss_dssp EEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh
Confidence 899999999987765443333345679999999999865 678889999999999999999999997532
Q ss_pred cccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 563 QHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
. .. ............. .........+.+++..||+.||++|||+.|+++
T Consensus 225 ~-----~~-~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 225 N-----QI-SKLHAIIDPNHEI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp S-----HH-HHHHHHHCTTSCC---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred h-----HH-HHHHHHhcCCccc---------CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 2 11 1111111111100 000001123778999999999999999999975
No 114
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.1e-40 Score=336.33 Aligned_cols=261 Identities=20% Similarity=0.262 Sum_probs=197.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++....... ....+.+.+|+.++++++||||++++
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~-----------~~~~~~~~~e~~~l~~l~hp~iv~~~ 100 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDT-VRERIVALKLMSETLSSD-----------PVFRTRMQREARTAGRLQEPHVVPIH 100 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEET-TTTEEEEEEECGGGGGGS-----------HHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEc-CCCeEEEEEecCcccccC-----------HHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence 478999999999999999999864 578999999985432110 11246788999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++...+..++||||+++++|.+++... ..+++..++.++.|+++||+|| |+.+|+||||||+||+++.++.+
T Consensus 101 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~NIl~~~~~~~ 173 (309)
T 2h34_A 101 DFGEIDGQLYVDMRLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAA---HAAGATHRDVKPENILVSADDFA 173 (309)
T ss_dssp EEEEETTEEEEEEECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCE
T ss_pred EEEeeCCeEEEEEEecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH---HHCcCCcCCCChHHEEEcCCCCE
Confidence 9999999999999999999999999863 4589999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ..+...+
T Consensus 174 kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~- 247 (309)
T 2h34_A 174 YLVDFGIASATTDEKLT-QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL----SVMGAHI- 247 (309)
T ss_dssp EECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH----HHHHHHH-
T ss_pred EEecCccCccccccccc-cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH----HHHHHHh-
Confidence 99999999876543222 12345689999999999999999999999999999999999999875321 1111111
Q ss_pred HhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCC-CHHHHHHHHHhh
Q 006739 576 NVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERP-NSKDVRCMLSQI 631 (633)
Q Consensus 576 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-s~~ev~~~l~~~ 631 (633)
........... ......+.+++.+||+.||++|| +++++++.|+++
T Consensus 248 --~~~~~~~~~~~--------~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~ 294 (309)
T 2h34_A 248 --NQAIPRPSTVR--------PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA 294 (309)
T ss_dssp --HSCCCCGGGTS--------TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred --ccCCCCccccC--------CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence 11111111111 11122377889999999999999 999999999875
No 115
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=6.9e-41 Score=335.87 Aligned_cols=255 Identities=25% Similarity=0.366 Sum_probs=197.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|.+.+.||+|+||.||+++.. .++..||+|++....... ..+.+.+|++++++++||||++++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~-------------~~~~~~~E~~~l~~l~hp~iv~~~ 86 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEER-SSGLERVIKTINKDRSQV-------------PMEQIEAEIEVLKSLDHPNIIKIF 86 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEGGGCCS-------------CHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred hhheeecceeccCCCeEEEEEEEc-cCCceEEEEEeeccccch-------------hHHHHHHHHHHHHhCCCchHHhHH
Confidence 367899999999999999999864 578999999986432110 145788999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe---cCC
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL---DDD 492 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill---~~~ 492 (633)
+++.+.+..++||||+++|+|.+++.........+++..++.++.|+++||+|| |+.+|+||||||+||++ +.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~dikp~NIl~~~~~~~ 163 (285)
T 3is5_A 87 EVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF---HSQHVVHKDLKPENILFQDTSPH 163 (285)
T ss_dssp EEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEESSSSTT
T ss_pred HheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEEECCCCHHHEEEecCCCC
Confidence 999999999999999999999999876544456799999999999999999999 67899999999999999 456
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+.+||+|||+++....... .....||+.|+|||.+. ..++.++||||||+++|||++|+.||..... .....
T Consensus 164 ~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~----~~~~~ 235 (285)
T 3is5_A 164 SPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL----EEVQQ 235 (285)
T ss_dssp CCEEECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH
T ss_pred CCEEEEeeecceecCCccc---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH----HHHHh
Confidence 7899999999987654322 23457899999999886 4688999999999999999999999975321 11111
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
... ........ . ... ....+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~---~~~~~~~~-~----~~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 236 KAT---YKEPNYAV-E----CRP---LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHH---HCCCCCCC-------CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred hhc---cCCccccc-c----cCc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 11111000 0 000 1123678899999999999999999975
No 116
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-41 Score=347.25 Aligned_cols=264 Identities=25% Similarity=0.346 Sum_probs=204.6
Q ss_pred CcccccccccccCeeEEEEEec---CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 338 GLASLEKIGSGGCGEVYKAELP---GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 338 ~~~~~~~ig~G~~g~Vy~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
.|++.+.||+|+||.||++.+. ..+++.||||++...... ...+.+.+|++++++++||||+++
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~~ 98 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGP-------------QHRSGWKQEIDILRTLYHEHIIKY 98 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCH-------------HHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccCh-------------HHHHHHHHHHHHHHhCCCcchhhE
Confidence 3488999999999999988653 347889999998654211 115678899999999999999999
Q ss_pred ceeeecC--CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 415 LAHMARP--DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 415 ~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++.+. ...++||||+++|+|.+++.. ..+++..++.++.|++.||+|| |+.+|+||||||+||+++.+
T Consensus 99 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~L---H~~~ivH~Dikp~Nil~~~~ 170 (318)
T 3lxp_A 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYL---HAQHYIHRDLAARNVLLDND 170 (318)
T ss_dssp EEEEEETTTTEEEEEECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTT
T ss_pred EEEEecCCCceEEEEEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCchheEEEcCC
Confidence 9999874 567899999999999999974 3489999999999999999999 67899999999999999999
Q ss_pred CceEEcccccccccCCCCCcc-eecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCccccccc------
Q 006739 493 MEARIADFGLAKAMPDAQTHI-TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHT------ 565 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~------ 565 (633)
+.+||+|||+++......... ......||..|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 171 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~ 250 (318)
T 3lxp_A 171 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI 250 (318)
T ss_dssp CCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCS
T ss_pred CCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcc
Confidence 999999999999876543321 1234568889999999999889999999999999999999999986532110
Q ss_pred --ccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 566 --EEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 566 --~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
.................. .........+.+++.+||+.||++|||++|+++.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 251 AQGQMTVLRLTELLERGERL----------PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp CCHHHHHHHHHHHHHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHhcccCC----------CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 001111111111111111 111122234888999999999999999999999999874
No 117
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.6e-41 Score=337.28 Aligned_cols=260 Identities=18% Similarity=0.290 Sum_probs=203.3
Q ss_pred hhcCcccccccccccCeeEEEEEecCC--CCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGS--NGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
..++|++.+.||+|+||.||+|++... ++..||+|.+...... ...+.+.+|+.++++++||||+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~i~ 76 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTL-------------DNKEKFMSEAVIMKNLDHPHIV 76 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCH-------------HHHHHHHHHHHHHHHHCCTTBC
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCc-------------hHHHHHHHHHHHHHhCCCCCcc
Confidence 457899999999999999999987533 3456999998654311 1146788999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++.+ +..++||||+++++|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.+
T Consensus 77 ~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~ 149 (281)
T 3cc6_A 77 KLIGIIEE-EPTWIIMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYL---ESINCVHRDIAVRNILVASP 149 (281)
T ss_dssp CEEEEECS-SSCEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEEEET
T ss_pred eEEEEEcC-CCCEEEEecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCccceEEECCC
Confidence 99999865 4568999999999999999753 34589999999999999999999 67899999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~ 571 (633)
+.+||+|||+++......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ....
T Consensus 150 ~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~----~~~~ 224 (281)
T 3cc6_A 150 ECVKLGDFGLSRYIEDEDYYK-ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN----KDVI 224 (281)
T ss_dssp TEEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG----GGHH
T ss_pred CcEEeCccCCCcccccccccc-cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh----HHHH
Confidence 999999999998765543221 234567889999999998899999999999999999998 9999865322 2222
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
+.+..... ...... ....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 225 ~~~~~~~~-~~~~~~------------~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 225 GVLEKGDR-LPKPDL------------CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp HHHHHTCC-CCCCTT------------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhcCCC-CCCCCC------------CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 22222111 011111 1123778999999999999999999999998874
No 118
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.1e-40 Score=332.19 Aligned_cols=254 Identities=22% Similarity=0.338 Sum_probs=202.9
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|... .+++.||+|++....... ...+.+.+|+.++++++||||++++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~i~~~~ 71 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHK-TTGLEFAAKIINTKKLSA------------RDFQKLEREARICRKLQHPNIVRLH 71 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCCH------------HHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEc-CCCceEEEEEeecccCCH------------HHHHHHHHHHHHHHHcCCCCcCeEE
Confidence 468999999999999999999864 578999999985433211 1246788999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc-
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME- 494 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~- 494 (633)
+++.+.+..++||||+++++|.+.+... ..+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.
T Consensus 72 ~~~~~~~~~~~v~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~ 144 (284)
T 3kk8_A 72 DSIQEESFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYC---HSNGIVHRNLKPENLLLASKAKG 144 (284)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESSSSTT
T ss_pred EEEEcCCEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH---HHCCcCcCCCCHHHEEEecCCCC
Confidence 9999999999999999999999988753 4589999999999999999999 6789999999999999986655
Q ss_pred --eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 495 --ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 495 --~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+||+|||++......... ....||+.|+|||.+.+..++.++||||+|+++|+|++|+.||..... .....
T Consensus 145 ~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~ 217 (284)
T 3kk8_A 145 AAVKLADFGLAIEVNDSEAW---HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----HRLYA 217 (284)
T ss_dssp CCEEECCCTTCEECCSSCBC---CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH
T ss_pred CcEEEeeceeeEEcccCccc---cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch----hHHHH
Confidence 999999999876654322 335799999999999999999999999999999999999999865321 12222
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+.......... ........+.+++.+||+.||++|||+.|+++
T Consensus 218 ~~~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 218 QIKAGAYDYPSP----------EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp HHHHTCCCCCTT----------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHhccccCCch----------hhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 121111110000 00011223778999999999999999999976
No 119
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.6e-41 Score=341.38 Aligned_cols=252 Identities=17% Similarity=0.267 Sum_probs=199.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCC------CeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSN------GKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHR 409 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ 409 (633)
.++|++.+.||+|+||.||+|+..... +..||+|++...... ..+.+.+|++++++++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~--------------~~~~~~~E~~~l~~l~h~ 72 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRN--------------YSESFFEAASMMSKLSHK 72 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGG--------------GHHHHHHHHHHHHTSCCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHH--------------HHHHHHHHHHHHHhCCCC
Confidence 468899999999999999999875322 257999998532211 145688999999999999
Q ss_pred cccccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 410 NLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 410 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
||+++++++.+++..++||||+++|+|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+||++
T Consensus 73 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll 146 (289)
T 4fvq_A 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFL---EENTLIHGNVCAKNILL 146 (289)
T ss_dssp TBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEE
T ss_pred CEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHH---hhCCeECCCcCcceEEE
Confidence 9999999999999999999999999999999762 34589999999999999999999 67899999999999999
Q ss_pred cCCCc--------eEEcccccccccCCCCCcceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcc
Q 006739 490 DDDME--------ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDD 560 (633)
Q Consensus 490 ~~~~~--------~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~ 560 (633)
+.++. +||+|||++...... ....||+.|+|||++.+ ..++.++||||||+++|||++|..|+..
T Consensus 147 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~ 220 (289)
T 4fvq_A 147 IREEDRKTGNPPFIKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS 220 (289)
T ss_dssp EECCBGGGTBCCEEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred ecCCcccccccceeeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcc
Confidence 98887 999999998754332 23458999999999987 6789999999999999999996655432
Q ss_pred cccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 561 FFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
... ......... ......... ...+.+++.+||+.||++|||++|+++.|+++
T Consensus 221 ~~~---~~~~~~~~~---~~~~~~~~~------------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l 273 (289)
T 4fvq_A 221 ALD---SQRKLQFYE---DRHQLPAPK------------AAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273 (289)
T ss_dssp TSC---HHHHHHHHH---TTCCCCCCS------------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTC
T ss_pred ccc---hHHHHHHhh---ccCCCCCCC------------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence 211 111111111 111111111 11267899999999999999999999999886
No 120
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.5e-40 Score=335.41 Aligned_cols=262 Identities=25% Similarity=0.354 Sum_probs=204.0
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||||++..... ..++.+|+.+++.++|++++..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~----------------~~~~~~e~~~l~~l~~~~~i~~~ 70 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDI-AAGEEVAIKLECVKTK----------------HPQLHIESKIYKMMQGGVGIPTI 70 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEEC-------------------CCCHHHHHHHHHHHTTSTTCCCE
T ss_pred CCceEEeeeecCCCCeEEEEEEEc-CCCceEEEEeeccccc----------------chHHHHHHHHHHHhcCCCCCCee
Confidence 478999999999999999999864 5789999998644321 23567899999999988887777
Q ss_pred eee-ecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe---cC
Q 006739 416 AHM-ARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL---DD 491 (633)
Q Consensus 416 ~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill---~~ 491 (633)
.++ ...+..++||||+ +++|.+++... ...+++..+..++.|++.||+|| |+.+|+||||||+||++ ++
T Consensus 71 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIl~~~~~~ 143 (296)
T 4hgt_A 71 RWCGAEGDYNVMVMELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYI---HSKNFIHRDVKPDNFLMGLGKK 143 (296)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECCGGG
T ss_pred eeecCCCCceEEEEEcc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeeeeccCC
Confidence 766 5667789999999 99999999752 34699999999999999999999 67899999999999999 78
Q ss_pred CCceEEcccccccccCCCCCcc-----eecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccc
Q 006739 492 DMEARIADFGLAKAMPDAQTHI-----TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTE 566 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~ 566 (633)
++.+||+|||+++......... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........
T Consensus 144 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 223 (296)
T 4hgt_A 144 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK 223 (296)
T ss_dssp TTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS
T ss_pred CCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh
Confidence 8999999999998776543211 12345799999999999999999999999999999999999999987544333
Q ss_pred cchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 567 EMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
............... . +...... ...+.+++..||+.||++|||++++++.|+++
T Consensus 224 ~~~~~~~~~~~~~~~--~----~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 224 RQKYERISEKKMSTP--I----EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp SSHHHHHHHHHHHSC--H----HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred hhhhhhhhcccccch--h----hhhhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 333333222211111 0 0000111 23478899999999999999999999999886
No 121
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-41 Score=350.19 Aligned_cols=260 Identities=27% Similarity=0.374 Sum_probs=193.3
Q ss_pred hcCcccccccccccCeeEEEEEecCCCC--eEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNG--KMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
...|+..+.||+|+||.||+|++...++ ..||+|.+...... ...+++.+|+.++++++||||++
T Consensus 88 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~il~~l~hpnIv~ 154 (373)
T 3c1x_A 88 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-------------GEVSQFLTEGIIMKDFSHPNVLS 154 (373)
T ss_dssp TEEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCS-------------HHHHHHHHHHTTSTTCCCTTBCC
T ss_pred hceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCH-------------HHHHHHHHHHHHHHhCCCCCcce
Confidence 3457778999999999999998753333 46899988643211 11567899999999999999999
Q ss_pred cceeeec-CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 414 LLAHMAR-PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 414 l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
+++++.. .+..++||||+++|+|.+++.. ....+++..+..++.||++||+|| |+.+|+||||||+||+++++
T Consensus 155 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~ 228 (373)
T 3c1x_A 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEK 228 (373)
T ss_dssp CCEEECCCSSCCEEEEECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTT
T ss_pred EEEEEEcCCCCeEEEEECCCCCCHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHH---HHCCEecCccchheEEECCC
Confidence 9998754 5578999999999999999974 245688999999999999999999 67899999999999999999
Q ss_pred CceEEcccccccccCCCCCcc--eecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccch
Q 006739 493 MEARIADFGLAKAMPDAQTHI--TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMS 569 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~ 569 (633)
+.+||+|||+++......... ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||..... ..
T Consensus 229 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~----~~ 304 (373)
T 3c1x_A 229 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FD 304 (373)
T ss_dssp CCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS----SC
T ss_pred CCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH----HH
Confidence 999999999998765432211 1233457889999999999999999999999999999999 6777765322 22
Q ss_pred HHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 570 LVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
....+.. ...... ... ....+.+++.+||+.||++|||++|+++.|+++
T Consensus 305 ~~~~~~~---~~~~~~-------p~~---~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 305 ITVYLLQ---GRRLLQ-------PEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp HHHHHHT---TCCCCC-------CTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHc---CCCCCC-------CCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 2222221 111110 011 123478889999999999999999999999886
No 122
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-41 Score=353.19 Aligned_cols=260 Identities=22% Similarity=0.282 Sum_probs=201.3
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
...++|++.+.||+|+||.||+++.. .+|+.||+|++.+... ........+.+|..++..++||||++
T Consensus 58 ~~~~~f~~~~~lG~G~fG~V~~~~~~-~~~~~vAiK~l~k~~~-----------~~~~~~~~~~~E~~il~~~~hp~Iv~ 125 (412)
T 2vd5_A 58 LQRDDFEILKVIGRGAFSEVAVVKMK-QTGQVYAMKIMNKWDM-----------LKRGEVSCFREERDVLVNGDRRWITQ 125 (412)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHH-----------HHHGGGCCHHHHHHHHHHSCTTTBCC
T ss_pred CChhhEEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEeHHHh-----------hhHHHHHHHHHHHHHHHhcCCCCeee
Confidence 34578999999999999999999874 5789999999843110 01111345788999999999999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++.+.+..|+||||+++|+|.+++.+. +..+++..+..++.||+.||+|| |+.+|+||||||+|||++.++
T Consensus 126 l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~L---H~~giiHrDLKp~NILld~~g 199 (412)
T 2vd5_A 126 LHFAFQDENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSV---HRLGYVHRDIKPDNILLDRCG 199 (412)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTS
T ss_pred EEEEEeeCCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecccCHHHeeecCCC
Confidence 999999999999999999999999999753 24699999999999999999999 678999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccc-------cCCCCCccchHHHHHHHHHHHhCCCCCcccccccc
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQ-------TLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTE 566 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~ 566 (633)
++||+|||+++........ ......||+.|+|||++. ...++.++|||||||++|||++|+.||........
T Consensus 200 ~vkL~DFGla~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~ 278 (412)
T 2vd5_A 200 HIRLADFGSCLKLRADGTV-RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET 278 (412)
T ss_dssp CEEECCCTTCEECCTTSCE-ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred CEEEeechhheeccCCCcc-ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH
Confidence 9999999999877654322 223467999999999987 35689999999999999999999999975322111
Q ss_pred cchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCC---CCHHHHHH
Q 006739 567 EMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRER---PNSKDVRC 626 (633)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R---Ps~~ev~~ 626 (633)
...+..+.. . ...+. .+ .. ....+.+++.+||. +|.+| |+++|+++
T Consensus 279 ~~~i~~~~~---~-~~~p~-~~----~~----~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 279 YGKIVHYKE---H-LSLPL-VD----EG----VPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHTHHH---H-CCCC---------C----CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHhccc---C-cCCCc-cc----cC----CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 111111100 0 00000 00 01 12237888999999 99998 58888764
No 123
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-40 Score=334.81 Aligned_cols=264 Identities=26% Similarity=0.351 Sum_probs=205.1
Q ss_pred hhhcCcccccccccccCeeEEEEEecC--CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPG--SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNL 411 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 411 (633)
.....|...+.||+|+||.||+|.+.. .++..||+|.+...... ...+.+.+|+.++++++||||
T Consensus 18 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~i 84 (298)
T 3pls_A 18 HERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM-------------QQVEAFLREGLLMRGLNHPNV 84 (298)
T ss_dssp GGGEEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSH-------------HHHHHHHHHHHHHHTCCCTTB
T ss_pred ccceEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccH-------------HHHHHHHHHHHHHHhCCCCCe
Confidence 334456777999999999999998632 23447999998643321 114678899999999999999
Q ss_pred cccceeeecCCcc-EEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 412 LPLLAHMARPDCH-LLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 412 v~l~~~~~~~~~~-~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
+++++++.+.+.. ++||||+.+|+|.+++.. ....+++..+..++.|+++||+|| |+.+|+||||||+||+++
T Consensus 85 v~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dikp~Nili~ 158 (298)
T 3pls_A 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLD 158 (298)
T ss_dssp CCCCEEECCSSSCCEEEECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEC
T ss_pred eeEEEEEecCCCCcEEEEecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEc
Confidence 9999999876665 999999999999999975 245689999999999999999999 677999999999999999
Q ss_pred CCCceEEcccccccccCCCCCc--ceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 491 DDMEARIADFGLAKAMPDAQTH--ITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
.++.+||+|||+++........ .......+|+.|+|||.+.+..++.++||||||+++|||++|..|+.... ...
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~---~~~ 235 (298)
T 3pls_A 159 ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI---DPF 235 (298)
T ss_dssp TTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS---CGG
T ss_pred CCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC---CHH
Confidence 9999999999999866543211 12234567899999999999999999999999999999999666643321 222
Q ss_pred hHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 569 SLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
.....+........ . ......+.+++.+||+.||.+|||++++++.|+++.
T Consensus 236 ~~~~~~~~~~~~~~-~------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 236 DLTHFLAQGRRLPQ-P------------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp GHHHHHHTTCCCCC-C------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCC-C------------ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 33333322111111 0 011234788999999999999999999999999863
No 124
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.4e-40 Score=339.61 Aligned_cols=258 Identities=25% Similarity=0.330 Sum_probs=205.8
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|++.+.||+|+||.||+|+.. .+|+.||+|++............ ..+++.+|+.++++++||||++++
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~--------~~~~~~~E~~~l~~l~h~~iv~~~ 81 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREK-STGLEYAAKFIKKRQSRASRRGV--------SREEIEREVSILRQVLHHNVITLH 81 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEBCSSSSCSSSB--------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hccEEEeeEeeecCCEEEEEEEEC-CCCeEEEEEEEecccccccccch--------hHHHHHHHHHHHHhCCCCCcceEE
Confidence 467999999999999999999875 57899999998765432211000 045688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC--
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM-- 493 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~-- 493 (633)
+++.+.+..++||||+++++|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~l---H~~~ivH~dikp~NIl~~~~~~~ 154 (321)
T 2a2a_A 82 DVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYL---HTKKIAHFDLKPENIMLLDKNIP 154 (321)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCTTSS
T ss_pred EEEecCCEEEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCChHHEEEecCCCC
Confidence 999999999999999999999999975 35689999999999999999999 678999999999999999887
Q ss_pred --ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHH
Q 006739 494 --EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 494 --~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~ 571 (633)
.+||+|||+++........ ....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ...
T Consensus 155 ~~~~kl~Dfg~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~- 226 (321)
T 2a2a_A 155 IPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK----QET- 226 (321)
T ss_dssp SCCEEECCCTTCEECCTTCCC---CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH----HHH-
T ss_pred cCCEEEccCccceecCccccc---cccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH----HHH-
Confidence 7999999999877654322 345699999999999999999999999999999999999999865321 111
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.......... .++....... ..+.+++.+||+.||++|||+.|+++
T Consensus 227 --~~~i~~~~~~---~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 227 --LANITSVSYD---FDEEFFSHTS----ELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --HHHHHTTCCC---CCHHHHTTCC----HHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --HHHHHhcccc---cChhhhcccC----HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1111111110 1111111111 23778999999999999999999986
No 125
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4.6e-41 Score=348.62 Aligned_cols=253 Identities=25% Similarity=0.302 Sum_probs=193.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHH-hhcCCCCccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINT-VGQIRHRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l 414 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++.+...... .....+.+|..+ ++.++||||+++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~AiK~~~~~~~~~~-----------~~~~~~~~e~~~ll~~~~hp~Iv~l 104 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHK-AEEVFYAVKVLQKKAILKK-----------KEEKHIMSERNVLLKNVKHPFLVGL 104 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEET-TTCCEEEEEEEEGGGBC------------------------CCBCCCCCTTBCCE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEc-CCCCEEEEEEEEHHHhhhh-----------HHHHHHHHHHHHHHHhCCCCCCCCE
Confidence 467999999999999999999875 5789999999865432110 113456667776 577899999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+.+..|+||||+++|+|.+++.. ...+++..+..++.||+.||+|| |+.+|+||||||+|||++.++.
T Consensus 105 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~ 177 (373)
T 2r5t_A 105 HFSFQTADKLYFVLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYL---HSLNIVYRDLKPENILLDSQGH 177 (373)
T ss_dssp EEEEECSSEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSC
T ss_pred EEEEEeCCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEECCCCC
Confidence 9999999999999999999999999976 34588999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+ .
T Consensus 178 ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~----~~~---~ 248 (373)
T 2r5t_A 178 IVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT----AEM---Y 248 (373)
T ss_dssp EEECCCCBCGGGBCCCC--CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH----HHH---H
T ss_pred EEEeeCccccccccCCC--ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH----HHH---H
Confidence 99999999986433221 22456799999999999999999999999999999999999999965321 111 2
Q ss_pred HHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHH
Q 006739 575 RNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCM 627 (633)
Q Consensus 575 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~ 627 (633)
..+....... . .. ....+.+++.+||+.||++||++.+.++.
T Consensus 249 ~~i~~~~~~~---~----~~----~~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 249 DNILNKPLQL---K----PN----ITNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp HHHHHSCCCC---C----SS----SCHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred HHHHhcccCC---C----CC----CCHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 2222211100 0 01 11237788999999999999998654433
No 126
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-42 Score=350.91 Aligned_cols=265 Identities=28% Similarity=0.383 Sum_probs=186.9
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhc--CCCCccccc
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQ--IRHRNLLPL 414 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l 414 (633)
++|++.+.||+|+||.||+|++ +++.||||++.... ...+.+|.+++.. ++||||+++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~-----------------~~~~~~e~~~~~~~~~~h~~i~~~ 62 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSRE-----------------ERSWFREAEIYQTVMLRHENILGF 62 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C---TTSCEEEEECC-TT-----------------HHHHHHHHHHHTSTTCCC-CBCCE
T ss_pred ceeeehhhccCCCCeEEEEEEE---cCcceEEEEecccc-----------------hhhHHHHHHHHHHHhccCcceeee
Confidence 5789999999999999999976 58899999985322 2345667777776 789999999
Q ss_pred ceeeecCC----ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCeeeCCCCCC
Q 006739 415 LAHMARPD----CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHI-----SHNPRIIHRDLKPA 485 (633)
Q Consensus 415 ~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~-----~h~~~ivH~Dikp~ 485 (633)
++++.... ..++||||+++|+|.+++.. ..+++..++.++.|++.||+|||. .|+.+|+||||||+
T Consensus 63 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~ 137 (303)
T 3gxj_A 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 137 (303)
T ss_dssp EEEEEEECSSSEEEEEEEECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGG
T ss_pred eeecccCCCccceeEEEEeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHH
Confidence 99998766 68999999999999999964 357888899999999999999941 11899999999999
Q ss_pred CeEecCCCceEEcccccccccCCCCCcc--eecccccCcccccccccccC------CCCCccchHHHHHHHHHHHhC---
Q 006739 486 NVLLDDDMEARIADFGLAKAMPDAQTHI--TTSNVAGTVGYIAPEYHQTL------KFTDKCDIYSFGVLLAVLVMG--- 554 (633)
Q Consensus 486 Nill~~~~~~kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~elltg--- 554 (633)
||+++.++.+||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 138 Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~ 217 (303)
T 3gxj_A 138 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 217 (303)
T ss_dssp GC-CCTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCB
T ss_pred HeEECCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCC
Confidence 9999999999999999997665443221 11334799999999998775 334689999999999999999
Q ss_pred -------CCCCccccccccc-chHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 555 -------RLPSDDFFQHTEE-MSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 555 -------~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
+.||......... ....+.+ ........ ..... ...+....+.+++.+||+.||++|||++++++
T Consensus 218 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 290 (303)
T 3gxj_A 218 GGIHEDYQLPYYDLVPSDPSVEEMRKVV---CEQKLRPN-IPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTBC-CCCCTTTTTCC-CCCCC-CHHHH---TTSCCCCC-CCGGG---GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred ccccceeeccccccCCCCccHHHHHHHH---HHhhcCCC-ccccc---cchhhHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence 6676543222111 1111111 11111110 01000 11245567899999999999999999999999
Q ss_pred HHHhhhC
Q 006739 627 MLSQIRH 633 (633)
Q Consensus 627 ~l~~~~~ 633 (633)
.|+++.+
T Consensus 291 ~L~~l~~ 297 (303)
T 3gxj_A 291 TLSQLSQ 297 (303)
T ss_dssp HHHC-CC
T ss_pred HHHHhhh
Confidence 9998853
No 127
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1e-41 Score=349.00 Aligned_cols=267 Identities=23% Similarity=0.327 Sum_probs=209.1
Q ss_pred hhcCcccccccccccCeeEEEEEe---cCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAEL---PGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNL 411 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 411 (633)
..++|++.+.||+|+||.||++++ ...+++.||||++..... ...+.+.+|++++++++||||
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~~i 86 (327)
T 3lxl_A 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP--------------DQQRDFQREIQILKALHSDFI 86 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCH--------------HHHHHHHHHHHHHHTCCCTTB
T ss_pred chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCH--------------HHHHHHHHHHHHHHhcCCCce
Confidence 347899999999999999999985 345789999999865431 114568899999999999999
Q ss_pred cccceeee--cCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 412 LPLLAHMA--RPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 412 v~l~~~~~--~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++++++. +....++||||+++++|.+++.... ..+++..++.++.|+++||+|| |+.+|+||||||+||++
T Consensus 87 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dikp~NIl~ 160 (327)
T 3lxl_A 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILV 160 (327)
T ss_dssp CCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEE
T ss_pred eEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCChhhEEE
Confidence 99999886 4556889999999999999997632 3589999999999999999999 67899999999999999
Q ss_pred cCCCceEEcccccccccCCCCCcc-eecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCccccccc---
Q 006739 490 DDDMEARIADFGLAKAMPDAQTHI-TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHT--- 565 (633)
Q Consensus 490 ~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~--- 565 (633)
+.++.+||+|||+++......... ......||..|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 161 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~ 240 (327)
T 3lxl_A 161 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM 240 (327)
T ss_dssp EETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH
T ss_pred CCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhh
Confidence 999999999999999876543322 2233468889999999998889999999999999999999999986432110
Q ss_pred -----ccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 566 -----EEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 566 -----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
.................. .........+.+++..||+.||++|||++|+++.|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 301 (327)
T 3lxl_A 241 MGCERDVPALSRLLELLEEGQRL----------PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301 (327)
T ss_dssp CC----CCHHHHHHHHHHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC
T ss_pred cccccccccHHHHHHHhhcccCC----------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 001111111111111111 11112233478899999999999999999999999876
No 128
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.1e-40 Score=359.69 Aligned_cols=254 Identities=27% Similarity=0.352 Sum_probs=204.0
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|+..+.||+|+||.||+|+.. .+|+.||+|++.+... ........+.+|++++++++||||++++
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~-~tg~~vAiK~l~k~~~-----------~~~~~~~~~~~E~~iL~~l~hp~Iv~l~ 251 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMK-ATGKLYACKKLNKKRL-----------KKRKGYQGAMVEKKILAKVHSRFIVSLA 251 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEHHHH-----------HHTTCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEEEhHHh-----------hhhHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence 478999999999999999999874 5789999999843211 0011245688899999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..|+||||++||+|.+++.........+++..+..++.||+.||+|| |+.+|+||||||+|||++.++.+
T Consensus 252 ~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~L---H~~gIvHrDLKP~NILl~~~g~v 328 (543)
T 3c4z_A 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL---HQRNIIYRDLKPENVLLDDDGNV 328 (543)
T ss_dssp EEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCE
T ss_pred EEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHH---HHcCCcccCCChHHEEEeCCCCE
Confidence 999999999999999999999999986544456799999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+ .+
T Consensus 329 kL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~---~~ 403 (543)
T 3c4z_A 329 RISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL---KQ 403 (543)
T ss_dssp EECCCTTCEECCTTCCC--BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHH---HH
T ss_pred EEeecceeeeccCCCcc--cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHH---HH
Confidence 99999999887654322 23457999999999999999999999999999999999999999764322122222 22
Q ss_pred HhhccCC-cchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCH
Q 006739 576 NVMTSEN-PTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNS 621 (633)
Q Consensus 576 ~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 621 (633)
....... ... .....+.+++.+||+.||++||++
T Consensus 404 ~i~~~~~~~p~------------~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 404 RVLEQAVTYPD------------KFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp HHHHCCCCCCT------------TSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred HHhhcccCCCc------------ccCHHHHHHHHHhccCCHhHCCCC
Confidence 2222111 111 112237788999999999999976
No 129
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.3e-40 Score=349.50 Aligned_cols=253 Identities=21% Similarity=0.293 Sum_probs=189.7
Q ss_pred hcCcccc-cccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhh-cCCCCcccc
Q 006739 336 EDGLASL-EKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVG-QIRHRNLLP 413 (633)
Q Consensus 336 ~~~~~~~-~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~ 413 (633)
.++|.+. +.||+|+||.||++... .+++.||||++... ..+.+|+.++. ..+||||++
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~-~~~~~vAiK~~~~~-------------------~~~~~E~~~~~~~~~hp~iv~ 119 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNK-RTQEKFALKMLQDC-------------------PKARREVELHWRASQCPHIVR 119 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECS-------------------HHHHHHHHHHHHHTTSTTBCC
T ss_pred cccceeccceeeeccCeEEEEEEEC-CCCCEEEEEEeCcc-------------------hhHHHHHHHHHHhcCCCCcce
Confidence 3567776 78999999999999864 57899999998421 23456777664 458999999
Q ss_pred cceeeec----CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 414 LLAHMAR----PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 414 l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++++.. ....|+||||+++|+|.+++... ....+++..+..|+.||+.||+|| |+.+|+||||||+|||+
T Consensus 120 l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~Nill 194 (400)
T 1nxk_A 120 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYL---HSINIAHRDVKPENLLY 194 (400)
T ss_dssp EEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEE
T ss_pred EeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCcCcceEEE
Confidence 9998865 56789999999999999999752 235699999999999999999999 67899999999999999
Q ss_pred cC---CCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccc
Q 006739 490 DD---DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTE 566 (633)
Q Consensus 490 ~~---~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~ 566 (633)
+. ++.+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 195 ~~~~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~ 271 (400)
T 1nxk_A 195 TSKRPNAILKLTDFGFAKETTSHNS---LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 271 (400)
T ss_dssp SSSSTTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS
T ss_pred ecCCCCccEEEEecccccccCCCCc---cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc
Confidence 97 78999999999987654322 2345789999999999999999999999999999999999999976443222
Q ss_pred cchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 567 EMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.......+.... ...... ........+.+++.+||+.||++|||+.|+++
T Consensus 272 ~~~~~~~i~~~~--~~~~~~--------~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 272 SPGMKTRIRMGQ--YEFPNP--------EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CCSHHHHHHHTC--CCCCTT--------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cHHHHHHHHcCc--ccCCCc--------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 222222222111 111100 00111234788999999999999999999986
No 130
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.1e-40 Score=343.58 Aligned_cols=250 Identities=29% Similarity=0.435 Sum_probs=199.3
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|+..+.||+|+||.||+|+.. .+++.||||++....... ....+++.+|++++++++||||++++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~-~~~~~vaiK~~~~~~~~~-----------~~~~~~~~~E~~~l~~l~hpniv~~~ 120 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSGKQS-----------NEKWQDIIKEVRFLQKLRHPNTIQYR 120 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEESCSSCH-----------HHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEc-cCCeEEEEEEEccccccc-----------hHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 456889999999999999999864 579999999986543211 11256788999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++...+..++||||++ |+|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+
T Consensus 121 ~~~~~~~~~~lv~e~~~-g~l~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~ 193 (348)
T 1u5q_A 121 GCYLREHTAWLVMEYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDVKAGNILLSEPGLV 193 (348)
T ss_dssp EEEEETTEEEEEEECCS-EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEEETTTEE
T ss_pred EEEEECCeEEEEEecCC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCE
Confidence 99999999999999997 6888887642 35689999999999999999999 67799999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccc---cCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQ---TLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
||+|||+++..... ....||+.|+|||++. ...++.++|||||||++|||++|+.||..... ..
T Consensus 194 kL~DfG~a~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~----~~--- 260 (348)
T 1u5q_A 194 KLGDFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MS--- 260 (348)
T ss_dssp EECCCTTCBSSSSB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HH---
T ss_pred EEeeccCceecCCC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh----HH---
Confidence 99999999876432 2357999999999884 56789999999999999999999999865321 11
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+........+. ...... ...+.+++.+||+.||++|||++++++
T Consensus 261 ~~~~~~~~~~~~------~~~~~~---~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 261 ALYHIAQNESPA------LQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp HHHHHHHSCCCC------CCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHhcCCCC------CCCCCC---CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 111111111111 001111 123678889999999999999999875
No 131
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.2e-40 Score=348.63 Aligned_cols=253 Identities=22% Similarity=0.365 Sum_probs=194.3
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC--CCcccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR--HRNLLP 413 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~ 413 (633)
...|++.+.||+|+||.||++... +++.||||++.....+. ...+.+.+|+.++.+++ ||||++
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~--~~~~vaiK~~~~~~~~~------------~~~~~~~~Ei~~l~~l~~~~~~iv~ 120 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEADN------------QTLDSYRNEIAYLNKLQQHSDKIIR 120 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECT--TCCEEEEEEEECTTCCH------------HHHHHHHHHHHHHHHHTTTCTTBCC
T ss_pred CCceEEEEEEccCCCeEEEEEEcC--CCCEEEEEEEecccccH------------HHHHHHHHHHHHHHHcccCCCeEEE
Confidence 356999999999999999999865 58999999986543221 12567899999999996 599999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++...+..++||| +.+++|.+++.. ...+++..+..++.||++||+|| |+.+|+||||||+|||++ ++
T Consensus 121 ~~~~~~~~~~~~lv~E-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~l---H~~~ivHrDlkp~NIll~-~~ 191 (390)
T 2zmd_A 121 LYDYEITDQYIYMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DG 191 (390)
T ss_dssp EEEEEECSSEEEEEEE-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHH---HTTTCCCCCCCGGGEEES-SS
T ss_pred EEEEEecCCEEEEEEe-cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHEEEE-CC
Confidence 9999999999999999 568899999976 34689999999999999999999 688999999999999996 57
Q ss_pred ceEEcccccccccCCCCCcceecccccCccccccccccc-----------CCCCCccchHHHHHHHHHHHhCCCCCcccc
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-----------LKFTDKCDIYSFGVLLAVLVMGRLPSDDFF 562 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~ 562 (633)
.+||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 271 (390)
T 2zmd_A 192 MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271 (390)
T ss_dssp CEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred eEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence 999999999987765433322345679999999999865 368889999999999999999999997532
Q ss_pred cccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 563 QHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
. ....+........... . .... ...+.+++.+||+.||++|||+.|+++
T Consensus 272 ~------~~~~~~~~~~~~~~~~-----~-~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 272 N------QISKLHAIIDPNHEIE-----F-PDIP---EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp C------HHHHHHHHHCTTSCCC-----C-CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred H------HHHHHHHHhCccccCC-----C-Cccc---hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 1 1111222221111100 0 0111 234778999999999999999999975
No 132
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.2e-40 Score=340.79 Aligned_cols=253 Identities=21% Similarity=0.305 Sum_probs=192.6
Q ss_pred hcCcccccccccccCeeEEEEEec--CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELP--GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
.++|++.+.||+|+||.||+++.. ..+++.||+|++........ ......+.+|+.++++++||||++
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~~E~~~l~~l~hp~iv~ 85 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRN----------AKDTAHTKAERNILEEVKHPFIVD 85 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC------------------------HHHHHHHCCCTTBCC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhh----------hhHHHHHHHHHHHHHhCCCCCccc
Confidence 468999999999999999999863 24789999999875432100 111456788999999999999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++...+..++||||+++|+|.+++... ..+++..+..++.||+.||+|| |+.+|+||||||+||+++.++
T Consensus 86 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~Dlkp~Nill~~~~ 158 (327)
T 3a62_A 86 LIYAFQTGGKLYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEISMALGHL---HQKGIIYRDLKPENIMLNHQG 158 (327)
T ss_dssp EEEEEECSSCEEEEEECCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCTTTEEECTTS
T ss_pred eeEEEEcCCEEEEEEeCCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHH---HhCCEEcccCCHHHeEECCCC
Confidence 999999999999999999999999999763 4589999999999999999999 677999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKW 573 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~ 573 (633)
.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...
T Consensus 159 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~--- 229 (327)
T 3a62_A 159 HVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR----KKT--- 229 (327)
T ss_dssp CEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHH---
T ss_pred cEEEEeCCcccccccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH----HHH---
Confidence 999999999876543222 12345799999999999999999999999999999999999999975321 111
Q ss_pred HHHhhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCC-----CHHHHHH
Q 006739 574 MRNVMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERP-----NSKDVRC 626 (633)
Q Consensus 574 ~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~ev~~ 626 (633)
+..+.... ..... ....+.+++.+||+.||++|| ++.|+++
T Consensus 230 ~~~i~~~~~~~p~~------------~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 230 IDKILKCKLNLPPY------------LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHHHHTCCCCCTT------------SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHHHhCCCCCCCC------------CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11111111 11111 122377889999999999999 6677754
No 133
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.9e-41 Score=343.22 Aligned_cols=265 Identities=22% Similarity=0.309 Sum_probs=205.5
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|++.+.||+|+||.||+++.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~~iv~~ 91 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGL-HDGHFYALKRILCHEQ--------------QDREEAQREADMHRLFNHPNILRL 91 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEET-TTCCEEEEEEEEESSH--------------HHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred CCeEEEEEEEecCCCCeEEEEEEec-CCCcEEEEEEEecCCH--------------HHHHHHHHHHHHHhhcCCCCeeeE
Confidence 4578999999999999999999864 5789999998854321 114578899999999999999999
Q ss_pred ceeee----cCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 415 LAHMA----RPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 415 ~~~~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
++++. .....++||||+++|+|.+++.........+++..++.++.|+++||+|| |+.+|+||||||+||+++
T Consensus 92 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~dlkp~NIl~~ 168 (317)
T 2buj_A 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI---HAKGYAHRDLKPTNILLG 168 (317)
T ss_dssp CEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEC
T ss_pred EEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEc
Confidence 99986 33467899999999999999987665567899999999999999999999 677999999999999999
Q ss_pred CCCceEEcccccccccCCCCCcc-------eecccccCcccccccccccCC---CCCccchHHHHHHHHHHHhCCCCCcc
Q 006739 491 DDMEARIADFGLAKAMPDAQTHI-------TTSNVAGTVGYIAPEYHQTLK---FTDKCDIYSFGVLLAVLVMGRLPSDD 560 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~~l~elltg~~p~~~ 560 (633)
.++.+||+|||++.......... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||..
T Consensus 169 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 248 (317)
T 2buj_A 169 DEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248 (317)
T ss_dssp TTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred CCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence 99999999999987654221110 012345799999999987644 68899999999999999999999975
Q ss_pred cccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 561 FFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
..... ......... ...... .......+.+++.+||+.||.+|||+.++++.|+.++
T Consensus 249 ~~~~~--~~~~~~~~~---~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 249 VFQKG--DSVALAVQN---QLSIPQ----------SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp HHHTT--SCHHHHHHC---C--CCC----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred hhccc--chhhHHhhc---cCCCCc----------cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 32211 111111111 000000 0111234788999999999999999999999999875
No 134
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.8e-40 Score=331.69 Aligned_cols=262 Identities=25% Similarity=0.352 Sum_probs=206.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++..... .+++.+|+.+++.++|++++..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~----------------~~~~~~e~~~l~~l~~~~~i~~~ 70 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDI-AAGEEVAIKLECVKTK----------------HPQLHIESKIYKMMQGGVGIPTI 70 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEET-TTTEEEEEEEEESCSS----------------CCHHHHHHHHHHHHTTSTTCCCE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEc-CCCcEEEEEEecCCcc----------------hhHHHHHHHHHHHhhcCCCCCcc
Confidence 478999999999999999999864 5899999998865432 23577899999999998877777
Q ss_pred eee-ecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe---cC
Q 006739 416 AHM-ARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL---DD 491 (633)
Q Consensus 416 ~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill---~~ 491 (633)
.++ ...+..++||||+ +++|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+||++ ++
T Consensus 71 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~ 143 (296)
T 3uzp_A 71 RWCGAEGDYNVMVMELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYI---HSKNFIHRDVKPDNFLMGLGKK 143 (296)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECCGGG
T ss_pred ccccCCCCceEEEEEec-CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHeEEecCCC
Confidence 666 5567779999999 89999999742 34699999999999999999999 67899999999999999 48
Q ss_pred CCceEEcccccccccCCCCCcc-----eecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccc
Q 006739 492 DMEARIADFGLAKAMPDAQTHI-----TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTE 566 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~ 566 (633)
++.+||+|||+++......... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........
T Consensus 144 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 223 (296)
T 3uzp_A 144 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK 223 (296)
T ss_dssp TTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS
T ss_pred CCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh
Confidence 8899999999998776543211 12345799999999999999999999999999999999999999986543333
Q ss_pred cchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 567 EMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
............... . +.+.... ...+.+++.+||+.||++|||++++++.|+++
T Consensus 224 ~~~~~~~~~~~~~~~-~-----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 224 RQKYERISEKKMSTP-I-----EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp SSHHHHHHHHHHHSC-H-----HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred hhhhhhhcccccCCc-h-----HHHHhhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence 333322222211111 0 0011111 13378889999999999999999999999886
No 135
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.7e-40 Score=331.19 Aligned_cols=250 Identities=25% Similarity=0.369 Sum_probs=179.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++........ ...+.+.+|+.+++.++||||++++
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~~i~~~~ 79 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHT-TTGQKVALKIINKKVLAKS-----------DMQGRIEREISYLRLLRHPHIIKLY 79 (275)
T ss_dssp CCCBCCCC---------EEEEECT-TTCCEEEEEEECSCC----------------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEEC-CCCCEEEEEEEEhhhcchH-----------HHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 368999999999999999999864 5789999999865432211 1145688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..++||||+ +++|.+++.. ...+++..++.++.|+++||+|| |+.+|+||||||+||++++++.+
T Consensus 80 ~~~~~~~~~~lv~e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dikp~Nil~~~~~~~ 151 (275)
T 2eue_A 80 DVIKSKDEIIMVIEYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYC---HRHKIVHRDLKPENLLLDEHLNV 151 (275)
T ss_dssp EEEECSSCEEEEEECC-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTSCE
T ss_pred EEEecCCeEEEEehhc-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCCeeccCChHhEEECCCCCE
Confidence 9999999999999999 6788888764 35699999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKF-TDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
||+|||+++........ ....||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||..... ....+.+
T Consensus 152 kl~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~ 224 (275)
T 2eue_A 152 KIADFGLSNIMTDGNFL---KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI----PVLFKNI 224 (275)
T ss_dssp EECCSSCC------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHH
T ss_pred EEeecccceeccCcccc---cCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH----HHHHHHH
Confidence 99999999876544322 23468999999999988765 7899999999999999999999975321 1111111
Q ss_pred HHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 575 RNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
... .......+ ...+.+++.+||+.||++|||++|+++
T Consensus 225 ~~~--~~~~~~~~------------~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 225 SNG--VYTLPKFL------------SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHT--CCCCCTTS------------CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HhC--CCCCCccC------------CHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 111 11111111 123778999999999999999999975
No 136
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=9.1e-41 Score=337.37 Aligned_cols=263 Identities=26% Similarity=0.328 Sum_probs=201.4
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCC--CeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSN--GKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRN 410 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n 410 (633)
......|++.+.||+|+||.||+|++...+ +..+|+|.+...... ...+.+.+|+.++++++|||
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~ 87 (298)
T 3f66_A 21 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-------------GEVSQFLTEGIIMKDFSHPN 87 (298)
T ss_dssp CGGGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSH-------------HHHHHHHHHHHHHHTCCCTT
T ss_pred CccceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCH-------------HHHHHHHHHHHHHHhCCCCC
Confidence 344567889999999999999999874322 346899988653321 11467889999999999999
Q ss_pred ccccceeee-cCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 411 LLPLLAHMA-RPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 411 iv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
|+++++++. .++..++||||+++|+|.+++.. ....+++..++.++.|+++||+|| |+.+|+||||||+||++
T Consensus 88 iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~l---H~~~i~H~dikp~Nil~ 161 (298)
T 3f66_A 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCML 161 (298)
T ss_dssp BCCCCEEECCSSSCCEEEEECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEE
T ss_pred EeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCchheEEE
Confidence 999999864 45678999999999999999974 245689999999999999999999 67899999999999999
Q ss_pred cCCCceEEcccccccccCCCCCc--ceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhC-CCCCcccccccc
Q 006739 490 DDDMEARIADFGLAKAMPDAQTH--ITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMG-RLPSDDFFQHTE 566 (633)
Q Consensus 490 ~~~~~~kl~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg-~~p~~~~~~~~~ 566 (633)
++++.+||+|||+++........ .......||+.|+|||.+.+..++.++||||+|+++|||++| ..||.....
T Consensus 162 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--- 238 (298)
T 3f66_A 162 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--- 238 (298)
T ss_dssp CTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT---
T ss_pred CCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH---
Confidence 99999999999999876543221 122345678899999999999999999999999999999995 555544221
Q ss_pred cchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 567 EMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
......+........ . .. ....+.+++.+||+.||++|||++|+++.|+++
T Consensus 239 -~~~~~~~~~~~~~~~-~---------~~---~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 289 (298)
T 3f66_A 239 -FDITVYLLQGRRLLQ-P---------EY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289 (298)
T ss_dssp -TTHHHHHHTTCCCCC-C---------TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -HHHHHHHhcCCCCCC-C---------cc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 222222211111000 0 01 123478899999999999999999999999886
No 137
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-40 Score=354.29 Aligned_cols=250 Identities=28% Similarity=0.426 Sum_probs=203.2
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|.+.+.||+|+||.||+|++. .+|+.||||++...... .......+.+|+.+++.++||||++++
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~-~~g~~vAvK~i~~~~~~-----------~~~~~~~~~~Ei~~l~~l~HpnIv~l~ 82 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHE-LTGHKVAVKILNRQKIR-----------SLDVVGKIRREIQNLKLFRHPHIIKLY 82 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEET-TTCCEEEEEEEEHHHHH-----------HTTTHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhhhcc-----------CHHHHHHHHHHHHHHHhCCCCCCCcEE
Confidence 468999999999999999999874 57899999998432110 011245788999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++...+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|| |+.+|+||||||+||+++.++.+
T Consensus 83 ~~~~~~~~~~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDLkp~NIll~~~~~v 155 (476)
T 2y94_A 83 QVISTPSDIFMVMEYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYC---HRHMVVHRDLKPENVLLDAHMNA 155 (476)
T ss_dssp EEEECSSEEEEEEECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCSGGGEEECTTCCE
T ss_pred EEEEECCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCCCcccccHHHEEEecCCCe
Confidence 999999999999999999999999864 45699999999999999999999 68899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKF-TDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
||+|||+++........ ....||+.|+|||++.+..+ +.++||||+||++|||++|+.||++... ..+ .
T Consensus 156 kL~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~----~~~---~ 225 (476)
T 2y94_A 156 KIADFGLSNMMSDGEFL---RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV----PTL---F 225 (476)
T ss_dssp EECCCSSCEECCTTCCB---CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS----HHH---H
T ss_pred EEEeccchhhccccccc---cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH----HHH---H
Confidence 99999999887654322 33579999999999988765 6799999999999999999999975322 122 1
Q ss_pred HHhhccCC-cchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 575 RNVMTSEN-PTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
..+..... .+..+ ...+.+++.+||+.||++|||++|+++
T Consensus 226 ~~i~~~~~~~p~~~------------s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 226 KKICDGIFYTPQYL------------NPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HHHHTTCCCCCTTC------------CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhcCCcCCCccC------------CHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 22221111 11111 123778999999999999999999986
No 138
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.2e-41 Score=361.71 Aligned_cols=258 Identities=28% Similarity=0.407 Sum_probs=205.6
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|+..+.||+|+||.||+|+.. .+|+.||+|++.+... ........+.+|++++++++|||||++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~-~tg~~vAvK~l~k~~~-----------~~~~~~~~~~~E~~iL~~l~hp~Iv~l 249 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVR-ATGKMYACKKLEKKRI-----------KKRKGEAMALNEKQILEKVNSRFVVSL 249 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHH-----------HHTTCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cccceEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhHhh-----------hhhHHHHHHHHHHHHHHHcCCCCEeeE
Confidence 3467999999999999999999875 5799999999843211 001114567889999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+.+..|+||||++||+|.+++.... ...+++..+..++.||+.||+|| |+.+|+||||||+|||++.++.
T Consensus 250 ~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yL---H~~gIvHrDLKPeNILld~~g~ 324 (576)
T 2acx_A 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDL---HRERIVYRDLKPENILLDDHGH 324 (576)
T ss_dssp EEEEECSSEEEEEECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSC
T ss_pred EEEEeeCCEEEEEEEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHH---HHCCEeccCCchheEEEeCCCC
Confidence 999999999999999999999999987522 34599999999999999999999 6779999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.+.+
T Consensus 325 vKL~DFGla~~~~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i 401 (576)
T 2acx_A 325 IRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV 401 (576)
T ss_dssp EEECCCTTCEECCTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHH
T ss_pred eEEEecccceecccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHh
Confidence 99999999988765432 234579999999999999899999999999999999999999997643322222222222
Q ss_pred HHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCC-----CHHHHHH
Q 006739 575 RNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERP-----NSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~ev~~ 626 (633)
... ....... ....+.+++.+||+.||++|| +++|+++
T Consensus 402 ~~~--~~~~p~~------------~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 402 KEV--PEEYSER------------FSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HHC--CCCCCTT------------SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred hcc--cccCCcc------------CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 211 1111111 112378899999999999999 6777764
No 139
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2e-40 Score=331.55 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=199.8
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|++.+.||+|+||.||+|... .++..||+|++..... ........+.+|+.++++++||||+++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~-----------~~~~~~~~~~~e~~~l~~l~h~~i~~~ 74 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREK-QSKFILALKVLFKAQL-----------EKAGVEHQLRREVEIQSHLRHPNILRL 74 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHH-----------HHHTCHHHHHHHHHHHTTCCCTTBCCE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEc-cCCcEEEEEEEecccc-----------chhhHHHHHHHHHHHHHcCCCCCCcch
Confidence 3478999999999999999999875 5788999999843211 011124578899999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+.+..++||||+++|+|.+++... ..+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~l~~L---H~~~i~H~dlkp~Nili~~~~~ 147 (279)
T 3fdn_A 75 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYC---HSKRVIHRDIKPENLLLGSAGE 147 (279)
T ss_dssp EEEEECSSEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HTTTCEECCCCGGGEEECTTSC
T ss_pred hheEecCCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH---HhCCEecccCChHhEEEcCCCC
Confidence 99999999999999999999999999763 4589999999999999999999 6889999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
+||+|||++....... .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... ....+.+
T Consensus 148 ~~l~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~ 219 (279)
T 3fdn_A 148 LKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY----QETYKRI 219 (279)
T ss_dssp EEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHH
T ss_pred EEEEeccccccCCccc----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH----HHHHHHH
Confidence 9999999986554332 1345789999999999999999999999999999999999999875321 1111111
Q ss_pred HHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 575 RNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
... ....... ....+.+++.+||+.||++|||++|+++
T Consensus 220 ~~~--~~~~~~~------------~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 220 SRV--EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp HHT--CCCCCTT------------SCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred HhC--CCCCCCc------------CCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111 1111111 1123678899999999999999999986
No 140
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.4e-41 Score=351.43 Aligned_cols=204 Identities=24% Similarity=0.453 Sum_probs=162.3
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC-CCccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-HRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l 414 (633)
.++|++.+.||+|+||.||+|.+. .+|+.||||++....... .....+.+|+.++.++. ||||+++
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~i~~~~~~~------------~~~~~~~~E~~~l~~l~~h~niv~l 74 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDR-RTGEVVAVKKIFDAFQNS------------TDAQRTFREIMILTELSGHENIVNL 74 (388)
T ss_dssp HTTEEEEEC-------CEEEEEET-TTCCEEEEEEECC--CCH------------HHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred cCceEEEEEeeeCCCeEEEEEEEC-CCCCEEEEEEecccccCh------------HHHHHHHHHHHHHHhccCCCCCCee
Confidence 468999999999999999999864 578999999986443211 11456778999999997 9999999
Q ss_pred ceeeecCC--ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 415 LAHMARPD--CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 415 ~~~~~~~~--~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++...+ ..|+||||++ ++|.+++.. ..+++..+..++.|+++||+|| |+.+|+||||||+|||++.+
T Consensus 75 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~ 145 (388)
T 3oz6_A 75 LNVLRADNDRDVYLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYL---HSGGLLHRDMKPSNILLNAE 145 (388)
T ss_dssp EEEEECTTSSCEEEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTT
T ss_pred eeEEecCCCCEEEEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHeEEcCC
Confidence 99997544 6799999997 599998874 3589999999999999999999 67899999999999999999
Q ss_pred CceEEcccccccccCCCCC-------------------cceecccccCccccccccccc-CCCCCccchHHHHHHHHHHH
Q 006739 493 MEARIADFGLAKAMPDAQT-------------------HITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLV 552 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell 552 (633)
+.+||+|||+|+....... ........||+.|+|||++.+ ..++.++||||+||++|||+
T Consensus 146 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell 225 (388)
T 3oz6_A 146 CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225 (388)
T ss_dssp CCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred CCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHH
Confidence 9999999999987643110 111234579999999999876 67899999999999999999
Q ss_pred hCCCCCccc
Q 006739 553 MGRLPSDDF 561 (633)
Q Consensus 553 tg~~p~~~~ 561 (633)
+|+.||.+.
T Consensus 226 ~g~~pf~~~ 234 (388)
T 3oz6_A 226 CGKPIFPGS 234 (388)
T ss_dssp HSSCSCCCS
T ss_pred hCCCCCCCC
Confidence 999999753
No 141
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-41 Score=343.09 Aligned_cols=261 Identities=25% Similarity=0.419 Sum_probs=200.4
Q ss_pred hhcCcccccccccccCeeEEEEEecCCC---CeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSN---GKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNL 411 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 411 (633)
....|+..+.||+|+||.||+|.+...+ +..||+|.+...... .....+.+|+.++++++||||
T Consensus 42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~i 108 (333)
T 1mqb_A 42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE-------------KQRVDFLGEAGIMGQFSHHNI 108 (333)
T ss_dssp CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCH-------------HHHHHHHHHHHHHHTCCCTTB
T ss_pred ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCH-------------HHHHHHHHHHHHHHhCCCCCC
Confidence 3467888999999999999999875333 346999998654321 114568899999999999999
Q ss_pred cccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC
Q 006739 412 LPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD 491 (633)
Q Consensus 412 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~ 491 (633)
+++++++.+.+..++||||+++|+|.+++... ...+++..++.++.|+++||+|| |+.+|+||||||+||+++.
T Consensus 109 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~ 182 (333)
T 1mqb_A 109 IRLEGVISKYKPMMIITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNS 182 (333)
T ss_dssp CCEEEEECSSSSEEEEEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECT
T ss_pred CcEEEEEecCCCcEEEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChheEEECC
Confidence 99999999999999999999999999999752 35699999999999999999999 6779999999999999999
Q ss_pred CCceEEcccccccccCCCCCc-ceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccch
Q 006739 492 DMEARIADFGLAKAMPDAQTH-ITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMS 569 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~ 569 (633)
++.+||+|||+++........ .......+|..|+|||.+.+..++.++||||||+++|||++ |+.||..... ..
T Consensus 183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~----~~ 258 (333)
T 1mqb_A 183 NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HE 258 (333)
T ss_dssp TCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HH
T ss_pred CCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH----HH
Confidence 999999999999876543221 11223456889999999998899999999999999999999 9999865321 12
Q ss_pred HHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 570 LVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
+.+ .......... .......+.+++.+||+.||++||++.++++.|+++
T Consensus 259 ~~~---~~~~~~~~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 259 VMK---AINDGFRLPT----------PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp HHH---HHHTTCCCCC----------CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHH---HHHCCCcCCC----------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 222 2222211110 011123478899999999999999999999999876
No 142
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=345.68 Aligned_cols=251 Identities=21% Similarity=0.316 Sum_probs=202.0
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||||++............. .....+.+|+.++++++||||++++
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~Iv~~~ 95 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDK-EKNKEVVVKFIKKEKVLEDCWIED------PKLGKVTLEIAILSRVEHANIIKVL 95 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEET-TTTEEEEEEEEESTTSCTTSEEEE------TTTEEEEHHHHHHTTCCCTTBCCEE
T ss_pred ccceEEEeEEEecCCEEEEEEEEC-CCCcEEEEEEEehhhcccccccch------HHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 468999999999999999999864 578999999987654321100000 0023567899999999999999999
Q ss_pred eeeecCCccEEEEecccCC-CHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 416 AHMARPDCHLLVYEFMKNG-SLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
+++.+.+..++||||+.+| +|.+++.. ...+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.
T Consensus 96 ~~~~~~~~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~ 168 (335)
T 3dls_A 96 DIFENQGFFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYL---RLKDIIHRDIKDENIVIAEDFT 168 (335)
T ss_dssp EEEECSSEEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSC
T ss_pred EEEeeCCEEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEEeccCHHHEEEcCCCc
Confidence 9999999999999999777 99999875 34699999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcccccccccchHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKF-TDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKW 573 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~ 573 (633)
+||+|||+++........ ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......
T Consensus 169 ~kL~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------- 237 (335)
T 3dls_A 169 IKLIDFGSAAYLERGKLF---YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV-------- 237 (335)
T ss_dssp EEECCCTTCEECCTTCCB---CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT--------
T ss_pred EEEeecccceECCCCCce---eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH--------
Confidence 999999999887654332 23579999999999988776 778999999999999999999997532100
Q ss_pred HHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHH
Q 006739 574 MRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCM 627 (633)
Q Consensus 574 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~ 627 (633)
.........+ ...+.+++.+||+.||++|||++|+++.
T Consensus 238 ----~~~~~~~~~~------------~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 ----EAAIHPPYLV------------SKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----TTCCCCSSCC------------CHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----hhccCCCccc------------CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0001111111 1237789999999999999999999873
No 143
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.3e-40 Score=340.90 Aligned_cols=265 Identities=23% Similarity=0.352 Sum_probs=203.5
Q ss_pred hhcCcccccccccccCeeEEEEEec----CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELP----GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRN 410 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n 410 (633)
..++|++.+.||+|+||.||+|++. ..++..||||++...... ....++.+|+.++++++|||
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~ 94 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-------------QDELDFLMEALIISKFNHQN 94 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCH-------------HHHHHHHHHHHHHHHCCCTT
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccch-------------hhHHHHHHHHHHHhhCCCCC
Confidence 3478999999999999999999852 246789999998643221 11456888999999999999
Q ss_pred ccccceeeecCCccEEEEecccCCCHHHHHhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCe
Q 006739 411 LLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQ---GRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANV 487 (633)
Q Consensus 411 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Ni 487 (633)
|+++++++......++||||+++++|.+++..... ....+++..++.++.|+++||+|| |+.+|+||||||+||
T Consensus 95 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L---H~~~i~H~dlkp~NI 171 (327)
T 2yfx_A 95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL---EENHFIHRDIAARNC 171 (327)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGE
T ss_pred CCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHH---hhCCeecCcCCHhHE
Confidence 99999999999999999999999999999986432 124589999999999999999999 678999999999999
Q ss_pred EecC---CCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCccccc
Q 006739 488 LLDD---DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQ 563 (633)
Q Consensus 488 ll~~---~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~ 563 (633)
+++. +..+||+|||+++...............||+.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 172 li~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~- 250 (327)
T 2yfx_A 172 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS- 250 (327)
T ss_dssp EESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-
T ss_pred EEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC-
Confidence 9994 44699999999986644333222334568999999999998899999999999999999998 999986532
Q ss_pred ccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 564 HTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
.....+.+. ....... .......+.+++.+||+.||++||++.++++.|+.+.
T Consensus 251 ---~~~~~~~~~---~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 251 ---NQEVLEFVT---SGGRMDP----------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp ---HHHHHHHHH---TTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHHHHHh---cCCCCCC----------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 122222222 1111110 0111234778999999999999999999999998764
No 144
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=344.91 Aligned_cols=249 Identities=23% Similarity=0.306 Sum_probs=194.1
Q ss_pred ccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccceeee
Q 006739 340 ASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMA 419 (633)
Q Consensus 340 ~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 419 (633)
...+.||+|+||.||+|+.. .+|+.||+|++..... ...+++.+|++++++++||||+++++++.
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~-~~g~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~ 156 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEET-ATGLKLAAKIIKTRGM--------------KDKEEVKNEISVMNQLDHANLIQLYDAFE 156 (373)
T ss_dssp EEEEECC-----CEEEEEET-TTCCEEEEEEEECCSH--------------HHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred ecceEEecCcCEEEEEEEEc-CCCcEEEEEEEccccc--------------ccHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 33678999999999999864 5789999999865431 11457889999999999999999999999
Q ss_pred cCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe--cCCCceEE
Q 006739 420 RPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL--DDDMEARI 497 (633)
Q Consensus 420 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill--~~~~~~kl 497 (633)
+.+..++||||+++++|.+++... ...+++..+..++.||++||+|| |+.+|+||||||+|||+ +.++.+||
T Consensus 157 ~~~~~~lv~E~~~~~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~~~kl 230 (373)
T 2x4f_A 157 SKNDIVLVMEYVDGGELFDRIIDE---SYNLTELDTILFMKQICEGIRHM---HQMYILHLDLKPENILCVNRDAKQIKI 230 (373)
T ss_dssp CSSEEEEEEECCTTCEEHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEETTTTEEEE
T ss_pred ECCEEEEEEeCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEEecCCCCcEEE
Confidence 999999999999999999988652 34689999999999999999999 67899999999999999 56788999
Q ss_pred cccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHHHh
Q 006739 498 ADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNV 577 (633)
Q Consensus 498 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 577 (633)
+|||+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ... +..+
T Consensus 231 ~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~---~~~----~~~i 300 (373)
T 2x4f_A 231 IDFGLARRYKPREKL---KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND---AET----LNNI 300 (373)
T ss_dssp CCCSSCEECCTTCBC---CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH---HHH----HHHH
T ss_pred EeCCCceecCCcccc---ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---HHH----HHHH
Confidence 999999987654322 235699999999999988899999999999999999999999975321 111 1111
Q ss_pred hccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 578 MTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 578 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
....... ....... ....+.+++.+||+.||.+|||+.|+++
T Consensus 301 ~~~~~~~---~~~~~~~----~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 301 LACRWDL---EDEEFQD----ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHTCCCS---CSGGGTT----SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HhccCCC---Chhhhcc----CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111110 0000011 1234788999999999999999999987
No 145
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.8e-40 Score=354.61 Aligned_cols=261 Identities=24% Similarity=0.330 Sum_probs=193.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|... .+++.||||++....... ...+++.+|+.+++.++||||++++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vAiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hpnIv~l~ 127 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDA-VLDRNVAIKKLSRPFQNQ------------THAKRAYRELVLMKCVNHKNIISLL 127 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEET-TTTEEEEEEEEESGGGSH------------HHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred cCCeEEEEEeecCCCeEEEEEEEC-CCCCEEEEEEECccccCh------------HHHHHHHHHHHHHHhCCCCCCCcEE
Confidence 478999999999999999999864 578999999986542111 1245788999999999999999999
Q ss_pred eeeecCC------ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 416 AHMARPD------CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 416 ~~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++.... ..|+||||+++ +|.+.+. ..+++..+..++.|+++||+|| |+.+|+||||||+|||+
T Consensus 128 ~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~l---H~~~iiHrDlkp~NIll 197 (464)
T 3ttj_A 128 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVV 197 (464)
T ss_dssp EEECSCCSTTTCCEEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEE
T ss_pred EEEccCCccccCCeEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChHhEEE
Confidence 9996553 46999999976 5666653 2489999999999999999999 67799999999999999
Q ss_pred cCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccch
Q 006739 490 DDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMS 569 (633)
Q Consensus 490 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~ 569 (633)
+.++.+||+|||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... ..
T Consensus 198 ~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~---~~ 271 (464)
T 3ttj_A 198 KSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI---DQ 271 (464)
T ss_dssp CTTSCEEECCCCCC-----CCC---C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HH
T ss_pred eCCCCEEEEEEEeeeecCCCcc---cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH---HH
Confidence 9999999999999987654322 23467999999999999999999999999999999999999999763221 11
Q ss_pred HHHHHHHhhccCCc-------------------------chhhhhhhhhcCC---HHHHHHHHHHHhHhccCCCCCCCCH
Q 006739 570 LVKWMRNVMTSENP-------------------------TRAIDAKLLENGY---EEQMLLVLKIACFCTVDSPRERPNS 621 (633)
Q Consensus 570 ~~~~~~~~~~~~~~-------------------------~~~~d~~~~~~~~---~~~~~~~~~l~~~cl~~dP~~RPs~ 621 (633)
+.+.+ ...+...+ .......+..... ......+.+++.+||+.||++|||+
T Consensus 272 ~~~i~-~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta 350 (464)
T 3ttj_A 272 WNKVI-EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 350 (464)
T ss_dssp HHHHH-HHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCH
T ss_pred HHHHH-HhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCH
Confidence 11111 11111000 0000000000000 1123468899999999999999999
Q ss_pred HHHHH
Q 006739 622 KDVRC 626 (633)
Q Consensus 622 ~ev~~ 626 (633)
+|+++
T Consensus 351 ~e~L~ 355 (464)
T 3ttj_A 351 DDALQ 355 (464)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99975
No 146
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=342.11 Aligned_cols=268 Identities=22% Similarity=0.286 Sum_probs=195.9
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC---CCCccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI---RHRNLL 412 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv 412 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++............ ...+.+|+++++++ +||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~---------~~~~~~e~~~l~~l~~~~h~niv 77 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDP-HSGHFVALKSVRVPNGGGGGGGL---------PISTVREVALLRRLEAFEHPNVV 77 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECT-TTCCEEEEEEEEEECCCTTSSCC---------CHHHHHHHHHHHHHHHHCCTTBC
T ss_pred ccceEEEEEEecCCCeEEEEEEEC-CCCcEEEEEEEeccccccccccc---------chhHHHHHHHHHHHhhcCCCCeE
Confidence 578999999999999999999864 57899999998643321110000 12344555555555 599999
Q ss_pred ccceeeecCC-----ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCe
Q 006739 413 PLLAHMARPD-----CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANV 487 (633)
Q Consensus 413 ~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Ni 487 (633)
++++++.... ..++||||++ ++|.+++.... ...+++..+..++.|+++||+|| |+.+|+||||||+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~Ni 151 (308)
T 3g33_A 78 RLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFL---HANCIVHRDLKPENI 151 (308)
T ss_dssp CEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCTTTE
T ss_pred EeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHE
Confidence 9999997755 4789999996 59999997532 34499999999999999999999 678899999999999
Q ss_pred EecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCccccccccc
Q 006739 488 LLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEE 567 (633)
Q Consensus 488 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~ 567 (633)
+++.++.+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 152 l~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--- 225 (308)
T 3g33_A 152 LVTSGGTVKLADFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA--- 225 (308)
T ss_dssp EECTTSCEEECSCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH---
T ss_pred EEcCCCCEEEeeCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH---
Confidence 999999999999999987654332 23467899999999999999999999999999999999999999753221
Q ss_pred chHHHHHHHhhccC----Ccchh-h-hhhh-------hhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 568 MSLVKWMRNVMTSE----NPTRA-I-DAKL-------LENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 568 ~~~~~~~~~~~~~~----~~~~~-~-d~~~-------~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
..+.+... ..... +.... + .... .....++....+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 226 DQLGKIFD-LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHHHHH-HHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHH-HhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 11222221 11110 00000 0 0000 00000112234788999999999999999999975
No 147
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9.1e-41 Score=334.81 Aligned_cols=249 Identities=24% Similarity=0.443 Sum_probs=202.9
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
..+|+..+.||+|+||.||+|+.. .+++.||+|++.... ..+.+|++++++++||||++++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~------------------~~~~~e~~~l~~l~h~~i~~~~ 70 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHR-IDGKTYVIKRVKYNN------------------EKAEREVKALAKLDHVNIVHYN 70 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEET-TTCCEEEEEEEECCS------------------GGGHHHHHHHHHCCCTTBCCEE
T ss_pred ccccceeeeeccCCceEEEEEEEc-CCCeEEEEEEecccc------------------HHHHHHHHHHHhCCCCCEEEEe
Confidence 357899999999999999999874 578999999986532 2356789999999999999999
Q ss_pred eeeec----------------CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeee
Q 006739 416 AHMAR----------------PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIH 479 (633)
Q Consensus 416 ~~~~~----------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH 479 (633)
+++.. ....++||||+++++|.+++.... ...+++..++.++.|+++||.|| |+.+|+|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H 145 (284)
T 2a19_B 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYI---HSKKLIN 145 (284)
T ss_dssp EEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHH---HHTTEEC
T ss_pred eeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHH---HhCCeee
Confidence 98854 345789999999999999997533 35689999999999999999999 6779999
Q ss_pred CCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCc
Q 006739 480 RDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSD 559 (633)
Q Consensus 480 ~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~ 559 (633)
|||||+||++++++.+||+|||++......... ....||+.|+|||.+.+..++.++||||||+++|||++|..|+.
T Consensus 146 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 222 (284)
T 2a19_B 146 RDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 222 (284)
T ss_dssp SCCSGGGEEEEETTEEEECCCTTCEESSCCSCC---CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred ccCCHHHEEEcCCCCEEECcchhheeccccccc---cccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence 999999999999999999999999877654322 33568999999999999999999999999999999999998864
Q ss_pred ccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhhC
Q 006739 560 DFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIRH 633 (633)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~~ 633 (633)
... ........ ......++ ..+.+++.+||+.||++|||+.|+++.|+.+++
T Consensus 223 ~~~---------~~~~~~~~-~~~~~~~~------------~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 223 ETS---------KFFTDLRD-GIISDIFD------------KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp HHH---------HHHHHHHT-TCCCTTSC------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred hHH---------HHHHHhhc-ccccccCC------------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 311 11111111 11111111 236788899999999999999999999998764
No 148
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.6e-40 Score=342.58 Aligned_cols=266 Identities=27% Similarity=0.371 Sum_probs=205.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhc--CCCCcccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQ--IRHRNLLP 413 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~ 413 (633)
.++|++.+.||+|+||.||+|++ +|+.||||++.... ...+.+|.+++.. ++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~-----------------~~~~~~e~~~~~~~~l~h~ni~~ 100 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSRE-----------------ERSWFREAEIYQTVMLRHENILG 100 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE---TTEEEEEEEECGGG-----------------HHHHHHHHHHHHHSCCCCTTBCC
T ss_pred cccEEEEeeecCCCCcEEEEEEE---cCccEEEEEeCchh-----------------HHHHHHHHHHHHHhhcCCCcEEE
Confidence 46899999999999999999987 68999999984321 2456677778776 78999999
Q ss_pred cceeeecCC----ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeeCCCCC
Q 006739 414 LLAHMARPD----CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHIS-----HNPRIIHRDLKP 484 (633)
Q Consensus 414 l~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~-----h~~~ivH~Dikp 484 (633)
+++++.... ..++||||+++|+|.+++.. ..+++..++.++.|+++||+|||.. ++.+|+||||||
T Consensus 101 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp 175 (342)
T 1b6c_B 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 175 (342)
T ss_dssp EEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSG
T ss_pred EEeeecccCCccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCH
Confidence 999998776 78999999999999999974 3589999999999999999999521 278999999999
Q ss_pred CCeEecCCCceEEcccccccccCCCCCcc--eecccccCcccccccccccCC------CCCccchHHHHHHHHHHHhC--
Q 006739 485 ANVLLDDDMEARIADFGLAKAMPDAQTHI--TTSNVAGTVGYIAPEYHQTLK------FTDKCDIYSFGVLLAVLVMG-- 554 (633)
Q Consensus 485 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~s~G~~l~elltg-- 554 (633)
+||+++.++.+||+|||+++......... ......||+.|+|||++.+.. ++.++|||||||++|||++|
T Consensus 176 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~ 255 (342)
T 1b6c_B 176 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 255 (342)
T ss_dssp GGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccC
Confidence 99999999999999999998765543221 123457999999999987753 33689999999999999999
Q ss_pred --------CCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 555 --------RLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 555 --------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
+.||....... .....+............. .... ...+....+.+++.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~ 329 (342)
T 1b6c_B 256 IGGIHEDYQLPYYDLVPSD--PSVEEMRKVVCEQKLRPNI-PNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKK 329 (342)
T ss_dssp BTTBCCCCCCTTTTTSCSS--CCHHHHHHHHTTSCCCCCC-CGGG---GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred cCCcccccccCccccCcCc--ccHHHHHHHHHHHHhCCCC-cccc---cchhHHHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 77876543321 1222222222222111111 1000 12245566889999999999999999999999
Q ss_pred HHHhhh
Q 006739 627 MLSQIR 632 (633)
Q Consensus 627 ~l~~~~ 632 (633)
.|+++.
T Consensus 330 ~L~~i~ 335 (342)
T 1b6c_B 330 TLSQLS 335 (342)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
No 149
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.4e-40 Score=333.01 Aligned_cols=260 Identities=24% Similarity=0.336 Sum_probs=203.8
Q ss_pred hhcCccccc-ccccccCeeEEEEEec-CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 335 KEDGLASLE-KIGSGGCGEVYKAELP-GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 335 ~~~~~~~~~-~ig~G~~g~Vy~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
..++|++.+ .||+|+||.||+|.+. ..+++.||||++.....+. ...+++.+|++++++++||||+
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~i~ 81 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP------------ALKDELLAEANVMQQLDNPYIV 81 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----C------------HHHHHHHHHHHHHHTCCCTTBC
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCH------------HHHHHHHHHHHHHHhCCCCCEE
Confidence 346788887 9999999999999653 3457899999986543211 1256789999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++ ..+..++||||+++++|.+++.. ...+++..++.++.|+++||+|| |+.+|+||||||+||+++.+
T Consensus 82 ~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dikp~Nil~~~~ 153 (291)
T 1xbb_A 82 RMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQ 153 (291)
T ss_dssp CEEEEE-ESSSEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEET
T ss_pred EEEEEE-CCCCcEEEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHH---HhCCeEcCCCCcceEEEeCC
Confidence 999999 56678999999999999999976 34589999999999999999999 67799999999999999999
Q ss_pred CceEEcccccccccCCCCCcce-ecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchH
Q 006739 493 MEARIADFGLAKAMPDAQTHIT-TSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSL 570 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~ 570 (633)
+.+||+|||+++.......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ...
T Consensus 154 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~ 229 (291)
T 1xbb_A 154 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG----SEV 229 (291)
T ss_dssp TEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHH
T ss_pred CcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH----HHH
Confidence 9999999999987765433221 123456789999999988889999999999999999999 9999875322 222
Q ss_pred HHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 571 VKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 571 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
.+.+.. ..... .+......+.+++.+||+.||++||++.++++.|+++
T Consensus 230 ~~~~~~---~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 230 TAMLEK---GERMG----------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp HHHHHT---TCCCC----------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHc---CCCCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 222221 11110 0111123478899999999999999999999999876
No 150
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.8e-41 Score=336.54 Aligned_cols=252 Identities=29% Similarity=0.409 Sum_probs=197.3
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|++.+.||+|+||.||++.. +|+.||||++..... .+.+.+|++++++++||||+++
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~----------------~~~~~~E~~~l~~l~h~~iv~~ 79 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKNDAT----------------AQAFLAEASVMTQLRHSNLVQL 79 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE---TTEEEEEEECCCCC------------------HHHHHTHHHHTTCCCTTBCCE
T ss_pred ChhhceEEeEEecCCCceEEEEEE---cCCEEEEEEecchhH----------------HHHHHHHHHHHHhCCCCCEeeE
Confidence 457899999999999999999986 588999999864321 4568899999999999999999
Q ss_pred ceeeecC-CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 415 LAHMARP-DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 415 ~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
++++.+. +..++||||+++++|.+++.... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~ 154 (278)
T 1byg_A 80 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDN 154 (278)
T ss_dssp EEEECCC--CCEEEECCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTS
T ss_pred EEEEEcCCCceEEEEecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHH---HhCCccccCCCcceEEEeCCC
Confidence 9987554 47899999999999999997532 23478999999999999999999 678999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHHH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~ 572 (633)
.+||+|||+++...... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .....
T Consensus 155 ~~~l~Dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~----~~~~~ 225 (278)
T 1byg_A 155 VAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KDVVP 225 (278)
T ss_dssp CEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG----GGHHH
T ss_pred cEEEeeccccccccccc-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH
Confidence 99999999988654432 22357889999999998899999999999999999998 9999875322 22222
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
.+ ....... . .......+.+++..||+.||++|||+.|+++.|++++
T Consensus 226 ~~---~~~~~~~------~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 226 RV---EKGYKMD------A----PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp HH---TTTCCCC------C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HH---hcCCCCC------C----cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 21 1111110 0 1111234778899999999999999999999999885
No 151
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.8e-40 Score=354.24 Aligned_cols=253 Identities=23% Similarity=0.305 Sum_probs=194.1
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+|+.||||++..... ........+.+|+.+++.++||||++++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~-----------~~~~~~~~~~~e~~~l~~l~h~~iv~l~ 214 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEK-ATGRYYAMKILKKEVI-----------VAKDEVAHTLTENRVLQNSRHPFLTALK 214 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHH-----------C-------------CCCCCSCTTSCCEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEc-CCCCEEEEEEEEhhhh-----------hhhHHHHHHHHHHHHHHhCCCCeEeeEE
Confidence 467999999999999999999864 5789999999853210 0111245678899999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..++||||+++|+|.+++.. ...+++..+..++.|+++||+|||. ..+|+||||||+|||++.++.+
T Consensus 215 ~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~ 288 (446)
T 4ejn_A 215 YSFQTHDRLCFVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHI 288 (446)
T ss_dssp EEEEETTEEEEEECCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCE
T ss_pred EEEeeCCEEEEEEeeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCE
Confidence 999999999999999999999999976 3468999999999999999999942 2789999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+.+.+.
T Consensus 289 kl~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~~~~i~ 362 (446)
T 4ejn_A 289 KITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----EKLFELIL 362 (446)
T ss_dssp EECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHH
T ss_pred EEccCCCceeccCCCc--ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH----HHHHHHHH
Confidence 9999999986443322 22346799999999999999999999999999999999999999965321 12222111
Q ss_pred HhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCC-----CHHHHHH
Q 006739 576 NVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERP-----NSKDVRC 626 (633)
Q Consensus 576 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~ev~~ 626 (633)
. ........+ ...+.+++.+||+.||++|| +++|+++
T Consensus 363 ~--~~~~~p~~~------------~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 363 M--EEIRFPRTL------------GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp H--CCCCCCTTS------------CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred h--CCCCCCccC------------CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1 111111111 12377899999999999999 9999875
No 152
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5e-40 Score=341.29 Aligned_cols=259 Identities=24% Similarity=0.330 Sum_probs=200.8
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC-----CCc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-----HRN 410 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~n 410 (633)
.++|++.++||+|+||.||+|+.. .+++.||||++.... ...+.+..|+.+++.++ |||
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------~~~~~~~~e~~~l~~l~~~~~~h~~ 97 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHI-DNKKYYAVKVVRNIK---------------KYTRSAKIEADILKKIQNDDINNNN 97 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECSCH---------------HHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred cCEEEEEEEEcccCCeEEEEEEEC-CCCeEEEEEEeccch---------------hhhhhhHHHHHHHHHhcccCCCCCC
Confidence 578999999999999999999875 578999999985321 11345677888888886 999
Q ss_pred ccccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 411 LLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 411 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
|+++++++...+..++||||+ +++|.+++.... ...+++..+..++.||+.||+|| |+.+|+||||||+|||++
T Consensus 98 iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~ 171 (360)
T 3llt_A 98 IVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYL---RKMSLTHTDLKPENILLD 171 (360)
T ss_dssp BCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEES
T ss_pred eecccceeeECCeeEEEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCcccEEEc
Confidence 999999999999999999999 899999998632 34589999999999999999999 678999999999999997
Q ss_pred C-------------------------CCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHH
Q 006739 491 D-------------------------DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFG 545 (633)
Q Consensus 491 ~-------------------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G 545 (633)
. ++.+||+|||+++...... ....||+.|+|||++.+..++.++||||||
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 246 (360)
T 3llt_A 172 DPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFG 246 (360)
T ss_dssp CTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHH
T ss_pred cccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHH
Confidence 5 7899999999998754432 345789999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcccccccccchHHHHHHHhhccCCcchhhhhhh-----------------hhc-CCH----------
Q 006739 546 VLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKL-----------------LEN-GYE---------- 597 (633)
Q Consensus 546 ~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-----------------~~~-~~~---------- 597 (633)
|++|||++|+.||..... ......+...... .+........ ... ...
T Consensus 247 ~il~ell~g~~pf~~~~~----~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 321 (360)
T 3llt_A 247 CVLAELYTGSLLFRTHEH----MEHLAMMESIIQP-IPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCL 321 (360)
T ss_dssp HHHHHHHHSSCSCCCSSH----HHHHHHHHHHTCC-CCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCC
T ss_pred HHHHHHHHCCCCCCCCcH----HHHHHHHHHhcCC-CCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcc
Confidence 999999999999975322 1222222222111 1111100000 000 000
Q ss_pred -----HHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 598 -----EQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 598 -----~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.....+.+++.+||+.||++|||++|+++
T Consensus 322 ~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 322 PLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp CHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00145779999999999999999999875
No 153
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.2e-40 Score=341.21 Aligned_cols=261 Identities=22% Similarity=0.295 Sum_probs=193.2
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|++.+.||+|+||.||+|+.. .+++.||||++....... ...+.+.+|+.++++++||||+++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~ 98 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDT-VTNETVAIKRIRLEHEEE------------GVPGTAIREVSLLKELQHRNIIEL 98 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEET-TTTEEEEEEECCCCC--------------------CHHHHHHGGGCCCTTBCCE
T ss_pred chhhEEEEEEEEecCCeEEEEEEEC-CCCceEEEEEEccccccc------------ccchhHHHHHHHHHHcCCCCcceE
Confidence 3478999999999999999999864 579999999986543211 114567789999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec----
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD---- 490 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~---- 490 (633)
++++.+.+..++||||+++ +|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+||+++
T Consensus 99 ~~~~~~~~~~~lv~e~~~~-~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~ 170 (329)
T 3gbz_A 99 KSVIHHNHRLHLIFEYAEN-DLKKYMDK----NPDVSMRVIKSFLYQLINGVNFC---HSRRCLHRDLKPQNLLLSVSDA 170 (329)
T ss_dssp EEEEEETTEEEEEEECCSE-EHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEC---
T ss_pred EEEEecCCEEEEEEecCCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCEECCCCCHHHEEEecCCC
Confidence 9999999999999999974 99999876 34589999999999999999999 678999999999999994
Q ss_pred -CCCceEEcccccccccCCCCCcceecccccCcccccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 491 -DDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTL-KFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 491 -~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
.++.+||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ..
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~ 245 (329)
T 3gbz_A 171 SETPVLKIGDFGLARAFGIPIRQ--FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE---ID 245 (329)
T ss_dssp --CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HH
T ss_pred CccceEEECcCCCccccCCcccc--cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH---HH
Confidence 4556999999999876543222 2345689999999998874 489999999999999999999999875322 12
Q ss_pred hHHHHHHHhhccCCcch--------------------hhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTR--------------------AIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~--------------------~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+.+..... ....... .+...+ ... ....+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 246 QLFKIFEVL-GLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVL-GAL---LDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHHHH-CCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHH-GGG---SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHh-CCCchhhhhhhhhhhhhhhhhhhhccccHhhhc-ccc---cCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 222222211 1000000 000000 000 1234788999999999999999999986
No 154
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.2e-40 Score=330.57 Aligned_cols=255 Identities=24% Similarity=0.378 Sum_probs=202.0
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++...... ...+.+.+|+.+++.++||||++++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i~~~~ 71 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKRAV-------------DCPENIKKEICINKMLNHENVVKFY 71 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEGGGCT-------------THHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred ecceEEEEEeecCCCcEEEEEEEC-CCCcEEEEEEeeeccch-------------hhhHHHHHHHHHHHhcCCCCceeee
Confidence 367899999999999999999864 57899999998533211 0145688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..++||||+++++|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+
T Consensus 72 ~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~ 144 (276)
T 2yex_A 72 GHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKPENLLLDERDNL 144 (276)
T ss_dssp EEEEETTEEEEEEECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCE
T ss_pred eEEEcCCEEEEEEEecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCChHHEEEccCCCE
Confidence 999999999999999999999998864 35689999999999999999999 67899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKF-TDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
||+|||.+................||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...... ......+.
T Consensus 145 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~ 222 (276)
T 2yex_A 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS--CQEYSDWK 222 (276)
T ss_dssp EECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT--SHHHHHHH
T ss_pred EEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHhh
Confidence 9999999987643322222234578999999999987665 67899999999999999999999764321 12222222
Q ss_pred HHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 575 RNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.. ...... .......+.+++.+||+.||++|||++|+++
T Consensus 223 ~~----~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 223 EK----KTYLNP---------WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TT----CTTSTT---------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hc----ccccCc---------hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 11 100000 0011223678899999999999999999875
No 155
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.9e-40 Score=328.32 Aligned_cols=251 Identities=24% Similarity=0.293 Sum_probs=200.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|++.+.||+|+||.||+|... .++..||+|++....... .+.+.+|++++++++||||++++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~a~k~~~~~~~~~--------------~~~~~~E~~~l~~l~h~~i~~~~ 72 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQK-GTRIRRAAKKIPKYFVED--------------VDRFKQEIEIMKSLDHPNIIRLY 72 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCSC--------------HHHHHHHHHHHHTCCCTTBCCEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeC-CCCcEEEEEeehhhccch--------------HHHHHHHHHHHHhCCCCCEeeEE
Confidence 467999999999999999999875 567899999985432210 45688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe---cCC
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL---DDD 492 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill---~~~ 492 (633)
+++.+.+..++||||+++++|.+++.. ...+++..+..++.|++.||+|| |+.+|+||||||+||++ +.+
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~ 145 (277)
T 3f3z_A 73 ETFEDNTDIYLVMELCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYC---HKLNVAHRDLKPENFLFLTDSPD 145 (277)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSTT
T ss_pred EEEecCCeEEEEEeccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHEEEecCCCC
Confidence 999999999999999999999999875 34589999999999999999999 67899999999999999 788
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+.+||+|||++......... ....||+.|+|||.+.+ .++.++||||+|+++|||++|+.||..... ...
T Consensus 146 ~~~~l~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~-- 215 (277)
T 3f3z_A 146 SPLKLIDFGLAARFKPGKMM---RTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTD----SEV-- 215 (277)
T ss_dssp CCEEECCCTTCEECCTTSCB---CCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHH--
T ss_pred CcEEEEecccceeccCccch---hccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCH----HHH--
Confidence 99999999999876654322 33579999999998876 489999999999999999999999875321 111
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
............ ...... ....+.+++.+||+.||++|||+.++++
T Consensus 216 -~~~~~~~~~~~~---~~~~~~----~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 216 -MLKIREGTFTFP---EKDWLN----VSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -HHHHHHCCCCCC---HHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -HHHHHhCCCCCC---chhhhc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111111110 000001 1234778999999999999999999975
No 156
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.3e-41 Score=335.35 Aligned_cols=259 Identities=22% Similarity=0.334 Sum_probs=205.1
Q ss_pred hcCccccc-ccccccCeeEEEEEec-CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 336 EDGLASLE-KIGSGGCGEVYKAELP-GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 336 ~~~~~~~~-~ig~G~~g~Vy~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
.++|.+.+ .||+|+||.||+|.+. ..++..||+|++...... ...+++.+|++++++++||||++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~i~~ 74 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK-------------ADTEEMMREAQIMHQLDNPYIVR 74 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCH-------------HHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccch-------------hHHHHHHHHHHHHHhCCCCCEeE
Confidence 45666666 9999999999999863 336788999998654311 11567889999999999999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++ ..+..++||||+++++|.+++.. ....+++..+..++.|+++||+|| |+.+|+||||||+||+++.++
T Consensus 75 ~~~~~-~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~ 147 (287)
T 1u59_A 75 LIGVC-QAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRDLAARNVLLVNRH 147 (287)
T ss_dssp EEEEE-ESSSEEEEEECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEEETT
T ss_pred EEEEe-cCCCcEEEEEeCCCCCHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHH---HHCCEeeCCCchheEEEcCCC
Confidence 99999 45668999999999999999864 245699999999999999999999 678999999999999999999
Q ss_pred ceEEcccccccccCCCCCcc-eecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHH
Q 006739 494 EARIADFGLAKAMPDAQTHI-TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~ 571 (633)
.+||+|||+++......... ......||+.|+|||++.+..++.++||||||+++|||++ |+.||..... ....
T Consensus 148 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~ 223 (287)
T 1u59_A 148 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG----PEVM 223 (287)
T ss_dssp EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT----HHHH
T ss_pred CEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH----HHHH
Confidence 99999999998875443321 1223457899999999988889999999999999999998 9999875422 2222
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
+.+.. ..... .+......+.+++..||+.||++||++.++++.|+++
T Consensus 224 ~~i~~---~~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 224 AFIEQ---GKRME----------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp HHHHT---TCCCC----------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhc---CCcCC----------CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 22221 11111 0111123478899999999999999999999999876
No 157
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=341.95 Aligned_cols=268 Identities=25% Similarity=0.318 Sum_probs=193.7
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+. +++.||||++..... . ......|+..+..++||||++++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~---------~------~~~~e~~~~~~~~~~h~~i~~~~ 73 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL---DERPVAVKVFSFANR---------Q------NFINEKNIYRVPLMEHDNIARFI 73 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE---TTEEEEEEEEEGGGH---------H------HHHHHHHHHTSTTCCCTTBCCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE---CCeEEEEEEeeccch---------h------hHHHHHHHHHHHhccCcchhhhe
Confidence 47899999999999999999986 789999999853210 0 11123445556668999999999
Q ss_pred eeeec-----CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC---------CeeeCC
Q 006739 416 AHMAR-----PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNP---------RIIHRD 481 (633)
Q Consensus 416 ~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~---------~ivH~D 481 (633)
+++.. ....++||||+++|+|.+++.. ...++..+..++.|+++||+||| +. +|+|||
T Consensus 74 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~D 145 (336)
T 3g2f_A 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRD 145 (336)
T ss_dssp EEEEEECTTSCEEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSS
T ss_pred ecccccccCCCceEEEEEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecc
Confidence 85532 3356899999999999999975 33589999999999999999995 55 999999
Q ss_pred CCCCCeEecCCCceEEcccccccccCCCCC------cceecccccCccccccccccc-------CCCCCccchHHHHHHH
Q 006739 482 LKPANVLLDDDMEARIADFGLAKAMPDAQT------HITTSNVAGTVGYIAPEYHQT-------LKFTDKCDIYSFGVLL 548 (633)
Q Consensus 482 ikp~Nill~~~~~~kl~DfG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~~l 548 (633)
|||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++
T Consensus 146 ikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il 225 (336)
T 3g2f_A 146 LNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIY 225 (336)
T ss_dssp CSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHH
T ss_pred cccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHH
Confidence 999999999999999999999987654321 111234569999999999876 3566789999999999
Q ss_pred HHHHhCCCCCcccccccccchH-H---------HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCC
Q 006739 549 AVLVMGRLPSDDFFQHTEEMSL-V---------KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRER 618 (633)
Q Consensus 549 ~elltg~~p~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R 618 (633)
|||++|+.||............ . ..+............+... ..........+.+++.+||+.||++|
T Consensus 226 ~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~R 303 (336)
T 3g2f_A 226 WEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA--WKENSLAVRSLKETIEDCWDQDAEAR 303 (336)
T ss_dssp HHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT--CCCCSHHHHHHHHHHHHHSCSSGGGS
T ss_pred HHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcc--cccccchHHHHHHHHHHHhcCChhhC
Confidence 9999998876432221111100 0 0011111111000000000 01122345568999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 006739 619 PNSKDVRCMLSQI 631 (633)
Q Consensus 619 Ps~~ev~~~l~~~ 631 (633)
||++|+++.|+++
T Consensus 304 ps~~e~l~~L~~l 316 (336)
T 3g2f_A 304 LTAQXAEERMAEL 316 (336)
T ss_dssp CCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHH
Confidence 9999999999886
No 158
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=339.49 Aligned_cols=267 Identities=24% Similarity=0.387 Sum_probs=207.0
Q ss_pred hcCcccccccccccCeeEEEEEe---cCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAEL---PGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
.++|++.+.||+|+||.||++++ ...+++.||+|++..... ...+.+.+|++++++++||||+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~~iv 105 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE--------------EHLRDFEREIEILKSLQHDNIV 105 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCS--------------HHHHHHHHHHHHHHTCCCTTBC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCH--------------HHHHHHHHHHHHHHhCCCCCee
Confidence 46789999999999999999985 345789999999865431 1145788999999999999999
Q ss_pred ccceeeecCC--ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 413 PLLAHMARPD--CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 413 ~l~~~~~~~~--~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
++++++...+ ..++||||+++++|.+++... ...+++..++.++.|+++||+|| |+.+|+||||||+||+++
T Consensus 106 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dikp~NIli~ 179 (326)
T 2w1i_A 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 179 (326)
T ss_dssp CEEEEECC----CCEEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEE
T ss_pred eEEEEEEecCCCceEEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHH---HhCCEeccCCCcceEEEc
Confidence 9999986644 789999999999999999753 34689999999999999999999 678999999999999999
Q ss_pred CCCceEEcccccccccCCCCCcce-ecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccc-----
Q 006739 491 DDMEARIADFGLAKAMPDAQTHIT-TSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQH----- 564 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~----- 564 (633)
.++.+||+|||+++.......... .....++..|+|||.+.+..++.++||||||+++|||++|+.|+......
T Consensus 180 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~ 259 (326)
T 2w1i_A 180 NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 259 (326)
T ss_dssp ETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHH
T ss_pred CCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhh
Confidence 999999999999988765433211 12345788899999999888999999999999999999999997642110
Q ss_pred --c-ccchHH-HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 565 --T-EEMSLV-KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 565 --~-~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
. ...... ............. ........+.+++.+||+.||++|||+.|+++.|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 260 GNDKQGQMIVFHLIELLKNNGRLP----------RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp CTTCCTHHHHHHHHHHHHTTCCCC----------CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccccchhhhHHHHHHHhhcCCCCC----------CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0 000011 1111111111110 01112234788999999999999999999999999885
No 159
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.7e-41 Score=367.92 Aligned_cols=258 Identities=26% Similarity=0.410 Sum_probs=207.0
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|++.+.||+|+||.||+|.+. ++..||||++...... .++|.+|++++++++||||+
T Consensus 263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~---------------~~~~~~E~~~l~~l~hpniv 325 (535)
T 2h8h_A 263 EIPRESLRLEVKLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMS---------------PEAFLQEAQVMKKLRHEKLV 325 (535)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEET--TTEEEEEEEECTTSSC---------------HHHHHHHHHHHHHCCCTTBC
T ss_pred ecchhhhhhheecccCCCeEEEEEEEC--CCceEEEEEeCCCCCC---------------HHHHHHHHHHHHhCCCCCEe
Confidence 345678999999999999999999985 5678999998654321 34688999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++.+ +..++||||+++|+|.+++.... ...+++..++.|+.||++||+|| |+.+|+||||||+|||++++
T Consensus 326 ~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~ 399 (535)
T 2h8h_A 326 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGEN 399 (535)
T ss_dssp CEEEEECS-SSCEEEECCCTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGG
T ss_pred eEEEEEee-ccceEeeehhcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHhhEEEcCC
Confidence 99999876 67899999999999999997532 24589999999999999999999 67899999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~ 571 (633)
+.+||+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||..... ..+.
T Consensus 400 ~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~----~~~~ 474 (535)
T 2h8h_A 400 LVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVL 474 (535)
T ss_dssp GCEEECCTTSTTTCCCHHH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH----HHHH
T ss_pred CcEEEcccccceecCCCce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHH
Confidence 9999999999987654211 11123456889999999999899999999999999999999 9999875321 1222
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
+.+ ....... ........+.+++.+||+.||++|||++++++.|+++
T Consensus 475 ~~i---~~~~~~~----------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 475 DQV---ERGYRMP----------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp HHH---HTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHH---HcCCCCC----------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 222 2211111 0111123477899999999999999999999999886
No 160
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-40 Score=342.27 Aligned_cols=267 Identities=25% Similarity=0.315 Sum_probs=199.5
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|++.+.||+|+||.||+|... .+++.||+|++...... .......+.+.+|++++++++||||+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~---------~~~~~~~~~~~~E~~~l~~l~hpniv 91 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIEN-QTRAIRAIKIMNKNKIR---------QINPKDVERIKTEVRLMKKLHHPNIA 91 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHH---------C---CHHHHHHHHHHHHHHCCCTTBC
T ss_pred hhhhhheeecceeeecCCeEEEEEEEC-CCCceEEEeehhhhhhc---------ccCHHHHHHHHHHHHHHHhCCCCCcc
Confidence 344678999999999999999999864 57899999998532110 00112256789999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCC------------------------------------CCCCCHHHHH
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQG------------------------------------RRELDWLARH 456 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~ 456 (633)
++++++.+.+..++||||+++|+|.+++...... ...+++..++
T Consensus 92 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
T 3hko_A 92 RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLIS 171 (345)
T ss_dssp CEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHH
T ss_pred eeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHH
Confidence 9999999999999999999999999998531110 1224677888
Q ss_pred HHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC--ceEEcccccccccCCCCC--cceecccccCccccccccccc
Q 006739 457 KIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM--EARIADFGLAKAMPDAQT--HITTSNVAGTVGYIAPEYHQT 532 (633)
Q Consensus 457 ~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~--~~kl~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~ 532 (633)
.++.|+++||+|| |+.+|+||||||+||+++.++ .+||+|||+++....... ........||+.|+|||++.+
T Consensus 172 ~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 248 (345)
T 3hko_A 172 NIMRQIFSALHYL---HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248 (345)
T ss_dssp HHHHHHHHHHHHH---HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTC
T ss_pred HHHHHHHHHHHHH---HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhcc
Confidence 9999999999999 677999999999999998776 899999999986643221 112234679999999999875
Q ss_pred --CCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHh
Q 006739 533 --LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFC 610 (633)
Q Consensus 533 --~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~c 610 (633)
..++.++|||||||++|||++|+.||..... ... ............ .+. ... ....+.+++.+|
T Consensus 249 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~----~~~~~~~~~~~~--~~~-~~~----~~~~~~~li~~~ 314 (345)
T 3hko_A 249 TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVND---ADT----ISQVLNKKLCFE--NPN-YNV----LSPLARDLLSNL 314 (345)
T ss_dssp SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHH----HHHHHHCCCCTT--SGG-GGG----SCHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCh---HHH----HHHHHhcccccC--Ccc-ccc----CCHHHHHHHHHH
Confidence 6789999999999999999999999975322 111 111111111100 000 001 123377899999
Q ss_pred ccCCCCCCCCHHHHHH
Q 006739 611 TVDSPRERPNSKDVRC 626 (633)
Q Consensus 611 l~~dP~~RPs~~ev~~ 626 (633)
|+.||++|||+.|+++
T Consensus 315 l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 315 LNRNVDERFDAMRALQ 330 (345)
T ss_dssp SCSCTTTSCCHHHHHH
T ss_pred cCCChhHCCCHHHHhc
Confidence 9999999999999986
No 161
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.8e-41 Score=336.70 Aligned_cols=262 Identities=23% Similarity=0.342 Sum_probs=203.1
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+++.. .+++.||+|++....... ...+.+.+|+.++++++||||++++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~i~~~~ 71 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRK-SDGKILVWKELDYGSMTE------------AEKQMLVSEVNLLRELKHPNIVRYY 71 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEECTTCCH------------HHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hhheeeehhccCCCCcEEEEEEEC-CCCcEEEEEEEEcccCCH------------HHHHHHHHHHHHHHhcCCCCCCeEE
Confidence 468999999999999999999864 578999999986543221 1156788999999999999999999
Q ss_pred eeee--cCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeeeCCCCCCCeEecC
Q 006739 416 AHMA--RPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISH--NPRIIHRDLKPANVLLDD 491 (633)
Q Consensus 416 ~~~~--~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h--~~~ivH~Dikp~Nill~~ 491 (633)
+++. .....++||||+++++|.+++.........+++..++.++.|++.||+|||... ..+|+||||||+||+++.
T Consensus 72 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~ 151 (279)
T 2w5a_A 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG 151 (279)
T ss_dssp EEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECS
T ss_pred EEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcC
Confidence 9874 456789999999999999999876555567999999999999999999995332 123999999999999999
Q ss_pred CCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHH
Q 006739 492 DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLV 571 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~ 571 (633)
++.+||+|||+++........ .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ..+.
T Consensus 152 ~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~ 225 (279)
T 2w5a_A 152 KQNVKLGDFGLARILNHDTSF--AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ----KELA 225 (279)
T ss_dssp SSCEEECCCCHHHHC---CHH--HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHH
T ss_pred CCCEEEecCchheeecccccc--ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH----HHHH
Confidence 999999999999876543221 1234689999999999998999999999999999999999999875321 2222
Q ss_pred HHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHH
Q 006739 572 KWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLS 629 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~ 629 (633)
+.+.. ..... +... ....+.+++.+||+.||++|||+.|+++.+.
T Consensus 226 ~~i~~---~~~~~------~~~~----~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 226 GKIRE---GKFRR------IPYR----YSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HHHHH---TCCCC------CCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred HHHhh---ccccc------CCcc----cCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 22221 11110 0011 1234778899999999999999999997653
No 162
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.4e-40 Score=332.90 Aligned_cols=257 Identities=23% Similarity=0.351 Sum_probs=189.3
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|++.+.||+|+||.||+|+.. .+|+.||+|++....... ...+.+.++...++.++||||+++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~------------~~~~~~~~~~~~~~~~~h~~iv~~ 71 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHV-PSGQIMAVKRIRATVNSQ------------EQKRLLMDLDISMRTVDCPFTVTF 71 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEC---CHH------------HHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEec-CCCeEEEEEEeecccCcH------------HHHHHHHHHHHHHHhCCCCeEEEE
Confidence 4578999999999999999999864 578999999986442211 113345556666888999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeeeCCCCCCCeEecCCC
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNP-RIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~-~ivH~Dikp~Nill~~~~ 493 (633)
++++.+++..++||||++ |+|.+++.........+++..+..++.|++.||+|| |+. +|+||||||+||+++.++
T Consensus 72 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~i~H~dlkp~Nil~~~~~ 147 (290)
T 3fme_A 72 YGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL---HSKLSVIHRDVKPSNVLINALG 147 (290)
T ss_dssp EEEEECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHHSCCCCCCCSGGGCEECTTC
T ss_pred eeeeeccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECCCC
Confidence 999999999999999997 599888876555567899999999999999999999 555 899999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCccccccccc----ccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccch
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYH----QTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMS 569 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~ 569 (633)
.+||+|||+++........ ....||+.|+|||++ .+..++.++||||+|+++|||++|+.||..... ....
T Consensus 148 ~~kl~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~ 222 (290)
T 3fme_A 148 QVKMCDFGISGYLVDDVAK---DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT--PFQQ 222 (290)
T ss_dssp CEEBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC--HHHH
T ss_pred CEEEeecCCcccccccccc---cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc--hHHH
Confidence 9999999999876554322 234689999999996 556788999999999999999999999975322 1111
Q ss_pred HHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 570 LVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
+.+.+ ........ ... ....+.+++.+||+.||++|||+.|+++
T Consensus 223 ~~~~~----~~~~~~~~------~~~---~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 223 LKQVV----EEPSPQLP------ADK---FSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHHHH----HSCCCCCC------TTT---SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHh----ccCCCCcc------ccc---CCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 11111 11111100 001 1223788999999999999999999976
No 163
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=7.7e-41 Score=343.10 Aligned_cols=266 Identities=25% Similarity=0.382 Sum_probs=199.1
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|++.+.||+|+||.||+|+.. .+|+.||+|++....... ...+.+.+|+.++++++||||+++
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~ 89 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNK-DTGRIVAIKKFLESDDDK------------MVKKIAMREIKLLKQLRHENLVNL 89 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEET-TTCCEEEEEEEESCSSCH------------HHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred hhhhheeeeEEeecCCEEEEEEEEC-CCCceEEEEEEecCCCch------------HHHHHHHHHHHHHhhCCCCCEeeE
Confidence 4578999999999999999999874 568999999986544221 114567889999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+.+..++||||+++++|.+++.. ...+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.
T Consensus 90 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nil~~~~~~ 162 (331)
T 4aaa_A 90 LEVCKKKKRWYLVFEFVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFC---HSHNIIHRDIKPENILVSQSGV 162 (331)
T ss_dssp EEEEEETTEEEEEEECCSEEHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSC
T ss_pred EEEeecCCEEEEEEecCCcchHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHH---HHCCEEccCcChheEEEcCCCc
Confidence 9999999999999999999999888654 34599999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTL-KFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKW 573 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~ 573 (633)
+||+|||+++........ .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+...
T Consensus 163 ~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~ 237 (331)
T 4aaa_A 163 VKLCDFGFARTLAAPGEV--YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI---DQLYHI 237 (331)
T ss_dssp EEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHH
T ss_pred EEEEeCCCceeecCCccc--cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHH
Confidence 999999999876543221 2335689999999998775 7899999999999999999999998753221 111111
Q ss_pred HHHhhccC-----------------CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 574 MRNVMTSE-----------------NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 574 ~~~~~~~~-----------------~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
+. ..... ...............+.....+.+++.+||+.||++|||++|+++
T Consensus 238 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 238 MM-CLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HH-HHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HH-HhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11 11100 000000000000011122345889999999999999999999875
No 164
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8e-40 Score=339.79 Aligned_cols=259 Identities=25% Similarity=0.376 Sum_probs=194.3
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|+..+.||+|+||.||+|... .+|+.||||++....... ...+++.+|++++++++||||++++
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hpnIv~l~ 90 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDG-RTGAKVAIKKLYRPFQSE------------LFAKRAYRELRLLKHMRHENVIGLL 90 (367)
T ss_dssp BSSEEEEEEC------CEEEEEET-TTCCEEEEEECSSTTSSH------------HHHHHHHHHHHHHHHCCBTTBCCCS
T ss_pred cceEEEeEEeeecCCeEEEEEEEC-CCCCEEEEEEeCccccCH------------HHHHHHHHHHHHHHhCCCcCCCCce
Confidence 468999999999999999999864 578999999986543211 1145788999999999999999999
Q ss_pred eeeecCC------ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 416 AHMARPD------CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 416 ~~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++.... ..|+||||+ +++|.+++.. ..+++..+..++.|+++||+|| |+.+|+||||||+||++
T Consensus 91 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~L---H~~~ivH~Dlkp~NIll 161 (367)
T 1cm8_A 91 DVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYI---HAAGIIHRDLKPGNLAV 161 (367)
T ss_dssp EEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEE
T ss_pred eeEecCCccccCceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHH---HHCCccccCcCHHHEEE
Confidence 9997653 459999999 8899999874 3589999999999999999999 67899999999999999
Q ss_pred cCCCceEEcccccccccCCCCCcceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 490 DDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 490 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
+.++.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .
T Consensus 162 ~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~ 232 (367)
T 1cm8_A 162 NEDCELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH----L 232 (367)
T ss_dssp CTTCCEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH----H
T ss_pred cCCCCEEEEeeecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH----H
Confidence 99999999999999876542 134578999999999877 6799999999999999999999999975322 1
Q ss_pred hHHHHHHHhhccCCcchhhh-----------hhh-------hhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTRAID-----------AKL-------LENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d-----------~~~-------~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.....+....... +.+.+. ..+ .....+.....+.+++.+||+.||++|||++|+++
T Consensus 233 ~~l~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 233 DQLKEIMKVTGTP-PAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHHHHHHCCC-CHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHhcCCC-CHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 1111111111110 000000 000 00011112234788999999999999999999986
No 165
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.4e-40 Score=352.83 Aligned_cols=198 Identities=26% Similarity=0.415 Sum_probs=154.8
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||||++.....+. ...+++.+|+.++++++|||||+++
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~i~~~~~~~------------~~~~~~~~E~~~l~~l~h~niv~l~ 118 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDK-LEKRVVAIKKILRVFEDL------------IDCKRILREIAILNRLNHDHVVKVL 118 (458)
T ss_dssp CTTEEECCC-------CEEEEEEC-C--CEEEEEEECSTTSSH------------HHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCCeEEeeEeeecCCeEEEEEEEC-CCCcEEEEEEechhhcCH------------HHHHHHHHHHHHHHhCCCCCCCceE
Confidence 468999999999999999999864 578999999986543221 1146788999999999999999999
Q ss_pred eeeec-----CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 416 AHMAR-----PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 416 ~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
+++.. ....|+||||+ +++|.+++.. ...+++..+..++.||++||+|| |+.+|+||||||+|||++
T Consensus 119 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~L---H~~~iiHrDlKp~NILl~ 190 (458)
T 3rp9_A 119 DIVIPKDVEKFDELYVVLEIA-DSDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYV---HSAGILHRDLKPANCLVN 190 (458)
T ss_dssp EECCCSCTTTCCCEEEEECCC-SEEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEEC
T ss_pred EEEecCCcccCceEEEEEecc-ccchhhhccc----CCCCCHHHHHHHHHHHHHHHHHH---HhCCcCCCCCChhhEEEC
Confidence 99844 35689999998 5699998864 45699999999999999999999 678999999999999999
Q ss_pred CCCceEEcccccccccCCCCCc-------------------------ceecccccCccccccccc-ccCCCCCccchHHH
Q 006739 491 DDMEARIADFGLAKAMPDAQTH-------------------------ITTSNVAGTVGYIAPEYH-QTLKFTDKCDIYSF 544 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~ 544 (633)
.++.+||+|||+++........ .......||+.|+|||++ .+..++.++|||||
T Consensus 191 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSl 270 (458)
T 3rp9_A 191 QDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI 270 (458)
T ss_dssp TTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHH
T ss_pred CCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHH
Confidence 9999999999999876532211 112345789999999976 55679999999999
Q ss_pred HHHHHHHHhC
Q 006739 545 GVLLAVLVMG 554 (633)
Q Consensus 545 G~~l~elltg 554 (633)
||++|||++|
T Consensus 271 G~il~elltg 280 (458)
T 3rp9_A 271 GCIFAELLNM 280 (458)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999999994
No 166
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.9e-40 Score=329.41 Aligned_cols=257 Identities=25% Similarity=0.337 Sum_probs=201.2
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccce
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA 416 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 416 (633)
++|++.+.||+|+||.||+++.. .+++.||+|.+............ ..+.+.+|+.++++++||||+++++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~~~--------~~~~~~~E~~~l~~l~h~~i~~~~~ 75 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQK-GTGKEYAAKFIKKRRLSSSRRGV--------SREEIEREVNILREIRHPNIITLHD 75 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEBCSSTTCSSSB--------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEc-CCCCeeehHHhhhccccccccch--------HHHHHHHHHHHHHhCCCCCeeehhh
Confidence 56899999999999999999875 47899999998765432111000 0456889999999999999999999
Q ss_pred eeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC---
Q 006739 417 HMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM--- 493 (633)
Q Consensus 417 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~--- 493 (633)
++.+....++||||+++++|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++
T Consensus 76 ~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~ 148 (283)
T 3bhy_A 76 IFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYL---HSKRIAHFDLKPENIMLLDKNVPN 148 (283)
T ss_dssp EEECSSEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSSSS
T ss_pred eecCCCeEEEEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCChHHEEEecCCCCC
Confidence 99999999999999999999999975 34689999999999999999999 678999999999999999877
Q ss_pred -ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 494 -EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 494 -~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
.+||+|||++......... ....||+.|+|||++.+..++.++||||||+++|||++|+.||..... .....
T Consensus 149 ~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~ 221 (283)
T 3bhy_A 149 PRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK----QETLT 221 (283)
T ss_dssp CCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHH
T ss_pred CceEEEecccceeccCCCcc---cccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch----HHHHH
Confidence 7999999999876543321 335689999999999999999999999999999999999999875321 11111
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+ ...... .+....... ...+.+++.+||+.||++|||+.|+++
T Consensus 222 ~~---~~~~~~---~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 222 NI---SAVNYD---FDEEYFSNT----SELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HH---HTTCCC---CCHHHHTTC----CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred Hh---HhcccC---CcchhcccC----CHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 11 111100 011111111 234778999999999999999999987
No 167
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=343.63 Aligned_cols=263 Identities=19% Similarity=0.305 Sum_probs=194.6
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccce
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA 416 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 416 (633)
++|++.+.||+|+||.||+|+.. .+++.||+|++....... ....+.+|++++++++||||+++++
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~h~~iv~~~~ 67 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSK-LTDNLVALKEIRLEHEEG-------------APCTAIREVSLLKDLKHANIVTLHD 67 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECC-------------------CCCCCCCHHHHSCCCCTTBCCEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEEC-CCCcEEEEEEEecccccc-------------cchhHHHHHHHHHhcCCCCCCeeee
Confidence 57899999999999999999864 578999999985433110 0223557999999999999999999
Q ss_pred eeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceE
Q 006739 417 HMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEAR 496 (633)
Q Consensus 417 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~k 496 (633)
++.+.+..++||||++ |+|.+++... ...+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+|
T Consensus 68 ~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~k 140 (324)
T 3mtl_A 68 IIHTEKSLTLVFEYLD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYC---HRQKVLHRDLKPQNLLINERGELK 140 (324)
T ss_dssp EEECSSCEEEEEECCS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHH---HHTTEEESSCCGGGEEECTTCCEE
T ss_pred EEeeCCEEEEEecccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCcCHHHEEECCCCCEE
Confidence 9999999999999997 5999888752 35689999999999999999999 678999999999999999999999
Q ss_pred EcccccccccCCCCCcceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 497 IADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 497 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
|+|||+++........ .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+.
T Consensus 141 l~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~----~~~~~~i~ 214 (324)
T 3mtl_A 141 LADFGLARAKSIPTKT--YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV----EEQLHFIF 214 (324)
T ss_dssp ECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHH
T ss_pred EccCcccccccCCccc--cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHH
Confidence 9999999865533221 233568999999999876 5689999999999999999999999976322 22222222
Q ss_pred HhhccCCcc---hhhhhh-hh------------hcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 576 NVMTSENPT---RAIDAK-LL------------ENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 576 ~~~~~~~~~---~~~d~~-~~------------~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
......... ...... .. ....+.....+.+++.+||+.||++|||++|+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 215 RILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 222211110 000000 00 0000111234778999999999999999999976
No 168
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.1e-39 Score=346.53 Aligned_cols=203 Identities=28% Similarity=0.367 Sum_probs=167.7
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||||++....... ...+.+.+|++++++++||||++++
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vAiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~nIv~l~ 91 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDK-NTEKNVAIKKVNRMFEDL------------IDCKRILREITILNRLKSDYIIRLY 91 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEET-TTTEEEEEEEECSTTTSH------------HHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cCCEEEEEEEeecCCEEEEEEEEC-CCCcEEEEEEeCchhcCh------------HHHHHHHHHHHHHHHcCCCCcceEE
Confidence 578999999999999999999865 578999999986543211 1146788999999999999999999
Q ss_pred eeeecC-----CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 416 AHMARP-----DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 416 ~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
+++... ...|+||||++ |+|.+++.. ...+++..+..++.||++||+|| |+.+|+||||||+|||++
T Consensus 92 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~L---H~~givHrDlkp~NILl~ 163 (432)
T 3n9x_A 92 DLIIPDDLLKFDELYIVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFI---HESGIIHRDLKPANCLLN 163 (432)
T ss_dssp EECCCSCTTTCCCEEEEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEC
T ss_pred EEEecCCCCcCCeEEEEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHH---HHCCCCCCCCCHHHeEEC
Confidence 998765 56899999996 599999874 45699999999999999999999 678999999999999999
Q ss_pred CCCceEEcccccccccCCCCCc--------------------ceecccccCccccccccc-ccCCCCCccchHHHHHHHH
Q 006739 491 DDMEARIADFGLAKAMPDAQTH--------------------ITTSNVAGTVGYIAPEYH-QTLKFTDKCDIYSFGVLLA 549 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~G~~l~ 549 (633)
.++.+||+|||+++........ .......||+.|+|||++ ....++.++||||+||++|
T Consensus 164 ~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ 243 (432)
T 3n9x_A 164 QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFA 243 (432)
T ss_dssp TTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred CCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHH
Confidence 9999999999999987543221 112456799999999986 5667999999999999999
Q ss_pred HHHhCCCCCc
Q 006739 550 VLVMGRLPSD 559 (633)
Q Consensus 550 elltg~~p~~ 559 (633)
||++|..||.
T Consensus 244 ell~g~~p~~ 253 (432)
T 3n9x_A 244 ELLNMLQSHI 253 (432)
T ss_dssp HHHTTCTTTC
T ss_pred HHHhcccccc
Confidence 9998665553
No 169
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.6e-40 Score=343.35 Aligned_cols=202 Identities=26% Similarity=0.449 Sum_probs=174.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||++++. .+++.||+|++...... ...+.+.+|+.++++++||||++++
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~va~K~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~~~ 97 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHK-PSGLVMARKLIHLEIKP-------------AIRNQIIRELQVLHECNSPYIVGFY 97 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEECCCCH-------------HHHHHHHHHHGGGGGCCCTTBCCEE
T ss_pred cccceeeeeecCCCCeEEEEEEEC-CCCcEEEEEEeccccCH-------------HHHHHHHHHHHHHHHCCCCCEEEEe
Confidence 467999999999999999999875 57899999998654311 1146789999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..++||||+++++|.+++... ..+++..+..++.|++.||+|||. ..+|+||||||+||+++.++.+
T Consensus 98 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~ 171 (360)
T 3eqc_A 98 GAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEI 171 (360)
T ss_dssp EEEEETTEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCE
T ss_pred EEEEECCEEEEEEECCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH--hCCEEcCCccHHHEEECCCCCE
Confidence 9999999999999999999999999763 458999999999999999999952 2389999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCccc
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDF 561 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~ 561 (633)
||+|||++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 172 kl~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 172 KLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp EECCCCCCHHHHHHC--------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred EEEECCCCccccccc----ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999987653321 13357899999999999999999999999999999999999999753
No 170
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.3e-40 Score=333.20 Aligned_cols=264 Identities=27% Similarity=0.396 Sum_probs=198.3
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCe--EEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGK--MIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
..++|++.+.||+|+||.||+|++...+++ .||+|++....... .+..+.+.+|++++++++||||+
T Consensus 16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~i~ 84 (291)
T 1u46_A 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-----------PEAMDDFIREVNAMHSLDHRNLI 84 (291)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC-------------------CHHHHHHHHHHHHHHHCCCTTBC
T ss_pred chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCC-----------HHHHHHHHHHHHHHHhCCCCCcc
Confidence 356899999999999999999987544443 68999885432111 11256788999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++..+. .++||||+++++|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.+
T Consensus 85 ~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nili~~~ 157 (291)
T 1u46_A 85 RLYGVVLTPP-MKMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATR 157 (291)
T ss_dssp CEEEEECSSS-CEEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEEET
T ss_pred cEEEEEccCC-ceeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHH---HhCCcccCCCchheEEEcCC
Confidence 9999998765 88999999999999999753 24589999999999999999999 67799999999999999999
Q ss_pred CceEEcccccccccCCCCCcc-eecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchH
Q 006739 493 MEARIADFGLAKAMPDAQTHI-TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSL 570 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~ 570 (633)
+.+||+|||+++......... ......+|..|+|||++.+..++.++||||||+++|||++ |+.||..... ...
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~ 233 (291)
T 1u46_A 158 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG----SQI 233 (291)
T ss_dssp TEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHH
T ss_pred CCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH----HHH
Confidence 999999999998876543322 1233467889999999988888999999999999999999 9999875321 122
Q ss_pred HHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 571 VKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 571 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
............ ........+.+++.+||+.||++|||+.++++.|++++
T Consensus 234 ---~~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 234 ---LHKIDKEGERLP---------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp ---HHHHHTSCCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred ---HHHHHccCCCCC---------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 222211111110 00111234788999999999999999999999998864
No 171
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.3e-40 Score=341.93 Aligned_cols=252 Identities=23% Similarity=0.321 Sum_probs=197.0
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 414 (633)
.++|++.+.||+|+||.||++... .+++.||+|++..... ...+|++++.++ +||||+++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~~------------------~~~~E~~~l~~~~~hp~iv~~ 81 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHK-ATNMEFAVKIIDKSKR------------------DPTEEIEILLRYGQHPNIITL 81 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEETTTC------------------CCHHHHHHHHHHTTSTTBCCE
T ss_pred cccEEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEcccC------------------ChHHHHHHHHHhcCCCCcCeE
Confidence 467999999999999999999875 5789999999865432 123466777777 79999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC--
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD-- 492 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~-- 492 (633)
++++.+.+..|+||||+++|+|.+++.. ...+++..+..++.||+.||+|| |+.+|+||||||+||++.++
T Consensus 82 ~~~~~~~~~~~lv~E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~l---H~~givHrDlkp~NIl~~~~~~ 154 (342)
T 2qr7_A 82 KDVYDDGKYVYVVTELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYL---HAQGVVHRDLKPSNILYVDESG 154 (342)
T ss_dssp EEEEECSSEEEEEECCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESSSSC
T ss_pred EEEEEcCCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCcEeccCCHHHEEEecCCC
Confidence 9999999999999999999999999875 35699999999999999999999 67899999999999998543
Q ss_pred --CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchH
Q 006739 493 --MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSL 570 (633)
Q Consensus 493 --~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~ 570 (633)
+.+||+|||+++........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .....+
T Consensus 155 ~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~ 231 (342)
T 2qr7_A 155 NPESIRICDFGFAKQLRAENGL--LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEI 231 (342)
T ss_dssp SGGGEEECCCTTCEECBCTTCC--BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT-SCHHHH
T ss_pred CcCeEEEEECCCcccCcCCCCc--eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc-CCHHHH
Confidence 35999999999876544322 2345789999999999888889999999999999999999999975321 111222
Q ss_pred HHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 571 VKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 571 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
...+........ ...+......+.+++.+||+.||++|||+.|+++
T Consensus 232 ---~~~i~~~~~~~~-------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 232 ---LARIGSGKFSLS-------GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp ---HHHHHHCCCCCC-------STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---HHHHccCCcccC-------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 222222111100 0001112234778999999999999999999875
No 172
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=365.87 Aligned_cols=258 Identities=22% Similarity=0.327 Sum_probs=200.0
Q ss_pred cCccccc-ccccccCeeEEEEEecC-CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 337 DGLASLE-KIGSGGCGEVYKAELPG-SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 337 ~~~~~~~-~ig~G~~g~Vy~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
+++.+.+ .||+|+||.||+|.+.. .++..||||+++...... ..+++.+|++++++++|||||++
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~-------------~~~~~~~E~~il~~l~hpniv~l 401 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA-------------DTEEMMREAQIMHQLDNPYIVRL 401 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSST-------------THHHHHHHHHHHTTCCCTTBCCE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChH-------------HHHHHHHHHHHHHhCCCCCEeeE
Confidence 4444445 79999999999998743 356789999987543211 14678899999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.. +..++||||+++|+|.+++.. ....+++..+..++.||++||+|| |+.+|+||||||+|||+++++.
T Consensus 402 ~~~~~~-~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~L---H~~~iiHrDlkp~NILl~~~~~ 474 (613)
T 2ozo_A 402 IGVCQA-EALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRNLAARNVLLVNRHY 474 (613)
T ss_dssp EEEEES-SSEEEEEECCTTCBHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTE
T ss_pred EEEecc-CCeEEEEEeCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHH---HHCCEEcCcCCHHHEEEcCCCc
Confidence 999976 568999999999999999964 245699999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcc-eecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHHH
Q 006739 495 ARIADFGLAKAMPDAQTHI-TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~ 572 (633)
+||+|||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ..+.+
T Consensus 475 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~----~~~~~ 550 (613)
T 2ozo_A 475 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG----PEVMA 550 (613)
T ss_dssp EEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS----HHHHH
T ss_pred EEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH----HHHHH
Confidence 9999999998775443221 1122346789999999999999999999999999999998 9999976432 22222
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
.+. ...... .+......+.+++..||+.||++||++.++++.|+++
T Consensus 551 ~i~---~~~~~~----------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 551 FIE---QGKRME----------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp HHH---TTCCCC----------CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHH---cCCCCC----------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 222 111111 0111223478899999999999999999999999875
No 173
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.2e-39 Score=327.88 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=197.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
...|.+.+.||+|+||.||+|... .++..||+|++...... ....+.+.+|+.++++++||||++++
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~va~k~~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~iv~~~ 91 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDT-ETTVEVAWCELQDRKLT------------KSERQRFKEEAEMLKGLQHPNIVRFY 91 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGGSC------------HHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred ceeEEeeeeccCCCCeEEEEeEec-CCceEEEEEEecchhhC------------HHHHHHHHHHHHHHHhCCCCCeeeee
Confidence 345788889999999999999865 57889999998643221 11256788999999999999999999
Q ss_pred eeeec----CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeCCCCCCCeEe
Q 006739 416 AHMAR----PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPR--IIHRDLKPANVLL 489 (633)
Q Consensus 416 ~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~--ivH~Dikp~Nill 489 (633)
+++.. ....++||||+++++|.+++... ..+++..++.++.|+++||+|| |+.+ |+||||||+||++
T Consensus 92 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~l---H~~~~~i~H~dikp~Nil~ 164 (290)
T 1t4h_A 92 DSWESTVKGKKCIVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFL---HTRTPPIIHRDLKCDNIFI 164 (290)
T ss_dssp EEEEEESSSCEEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HTSSSCCCCSCCCGGGEEE
T ss_pred eeeccccCCCceEEEEEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHH---HcCCCCEEECCCCHHHEEE
Confidence 98865 35578999999999999999763 4589999999999999999999 5666 9999999999999
Q ss_pred c-CCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 490 D-DDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 490 ~-~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
+ .++.+||+|||++........ ....||+.|+|||++.+ .++.++||||+|+++|+|++|+.||.....
T Consensus 165 ~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----- 234 (290)
T 1t4h_A 165 TGPTGSVKIGDLGLATLKRASFA----KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----- 234 (290)
T ss_dssp SSTTSCEEECCTTGGGGCCTTSB----EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----
T ss_pred ECCCCCEEEeeCCCccccccccc----ccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCc-----
Confidence 8 789999999999976544321 33569999999998874 689999999999999999999999965322
Q ss_pred hHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
............... ..+ .... ..+.+++..||+.||++|||++|+++
T Consensus 235 -~~~~~~~~~~~~~~~-~~~----~~~~----~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 235 -AAQIYRRVTSGVKPA-SFD----KVAI----PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -HHHHHHHHTTTCCCG-GGG----GCCC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -HHHHHHHHhccCCcc-ccC----CCCC----HHHHHHHHHHccCChhhCCCHHHHhh
Confidence 112222222221111 111 1111 23788999999999999999999985
No 174
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.5e-39 Score=347.68 Aligned_cols=262 Identities=23% Similarity=0.312 Sum_probs=205.3
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCC-ccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHR-NLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~l 414 (633)
.++|++.+.||+|+||.||+|++. .+++.||||++..... ..++.+|+++++.++|+ +++.+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~~vAvK~~~~~~~----------------~~~~~~E~~il~~L~~~~~i~~i 68 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLENVKTK----------------HPQLLYESKIYRILQGGTGIPNV 68 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEET-TTCCEEEEEEEETTCS----------------SCCHHHHHHHHHHTTTSTTCCCE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEEC-CCCcEEEEEEeccccc----------------cHHHHHHHHHHHHhcCCCCCCeE
Confidence 468999999999999999999864 5789999998754432 23467889999999875 55566
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe---cC
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL---DD 491 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill---~~ 491 (633)
..++...+..++||||+ +++|.+++... ...+++..++.|+.||+.||+|| |+.+|+||||||+|||+ +.
T Consensus 69 ~~~~~~~~~~~lvme~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yL---H~~gIvHrDIKP~NILl~~~~~ 141 (483)
T 3sv0_A 69 RWFGVEGDYNVLVMDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFV---HSKSFLHRDIKPDNFLMGLGRR 141 (483)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECCGGG
T ss_pred EEEEeeCCEEEEEEECC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccCcceEEEecCCC
Confidence 66667788889999999 99999999753 35699999999999999999999 67899999999999999 68
Q ss_pred CCceEEcccccccccCCCCCcc-----eecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccc
Q 006739 492 DMEARIADFGLAKAMPDAQTHI-----TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTE 566 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~ 566 (633)
++.+||+|||+++......... ......||..|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~ 221 (483)
T 3sv0_A 142 ANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK 221 (483)
T ss_dssp TTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH
T ss_pred CCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH
Confidence 8999999999998876543321 12356799999999999999999999999999999999999999987544322
Q ss_pred cchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 567 EMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
...+.++...... ... ..+.... ...+.+++..||+.||++||++++++++|+++
T Consensus 222 ~~~~~~i~~~~~~-~~~-----~~l~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 222 KQKYEKISEKKVA-TSI-----EALCRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHHHHHHHHHHHH-SCH-----HHHHTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcccc-ccH-----HHHhcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 2222222221111 100 0111111 23478899999999999999999999999886
No 175
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.2e-40 Score=329.79 Aligned_cols=254 Identities=24% Similarity=0.367 Sum_probs=181.5
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|++.+.||+|+||.||+|+.. .+|+.||+|++..... ......+.+.+|+.++++++||||+++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~-----------~~~~~~~~~~~e~~~l~~l~h~~i~~~ 76 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESI-HTGLEVAIKMIDKKAM-----------YKAGMVQRVQNEVKIHCQLKHPSILEL 76 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHH-----------HHTTCHHHHHHHHHHHTTBCCTTBCCE
T ss_pred ccccceeeeeecCCCceEEEEEEEc-cCCceEEEEEeehhhh-----------hhhhHHHHHHHHHHHHHhCCCCCeEeE
Confidence 3467999999999999999999864 4789999999842110 001114678899999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+.+..++||||+++++|.+++.. ....+++..++.++.|+++||+|| |+.+|+||||||+||+++.++.
T Consensus 77 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nili~~~~~ 150 (278)
T 3cok_A 77 YNYFEDSNYVYLVLEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLYL---HSHGILHRDLTLSNLLLTRNMN 150 (278)
T ss_dssp EEEEECSSEEEEEEECCTTEEHHHHHHT---CSSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSSCCGGGEEECTTCC
T ss_pred EEEEccCCeEEEEEecCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCC
Confidence 9999999999999999999999999874 235689999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
+||+|||++......... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||....... . .
T Consensus 151 ~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~---~ 221 (278)
T 3cok_A 151 IKIADFGLATQLKMPHEK--HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN----T---L 221 (278)
T ss_dssp EEECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------
T ss_pred EEEEeecceeeccCCCCc--ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH----H---H
Confidence 999999999876543221 123568999999999999899999999999999999999999987532211 0 1
Q ss_pred HHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 575 RNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
........ ..... ....+.+++.+||+.||++|||++++++
T Consensus 222 ~~~~~~~~-------~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 222 NKVVLADY-------EMPSF----LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp --CCSSCC-------CCCTT----SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHhhccc-------CCccc----cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 11111000 00001 1223778999999999999999999975
No 176
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.6e-39 Score=337.32 Aligned_cols=260 Identities=22% Similarity=0.379 Sum_probs=204.3
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 414 (633)
.++|++.+.||+|+||.||+|++. .+|+.||||++......... .......+.+.+|+.++.++ +||||+++
T Consensus 93 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~g~~vavK~~~~~~~~~~~------~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 93 YQKYDPKDVIGRGVSSVVRRCVHR-ATGHEFAVKIMEVTAERLSP------EQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEETTSSCCCH------HHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred hhhcccceEEecCCCEEEEEEEEC-CCCcEEEEEEEEccccccCH------HHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 467999999999999999999874 47899999998765422111 11223356788999999999 79999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++......++||||+++++|.+++.. ...+++..+..++.||+.||+|| |+.+|+||||||+||+++.++.
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~L---H~~gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFL---HANNIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCC
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCC
Confidence 9999999999999999999999999975 34699999999999999999999 6779999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCccccccccccc------CCCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT------LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ..
T Consensus 239 ikl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~----~~ 311 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR----QI 311 (365)
T ss_dssp EEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS----HH
T ss_pred EEEEecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC----HH
Confidence 99999999987765432 234679999999998863 358889999999999999999999986532 11
Q ss_pred hHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.....+. ....... .+. .... ...+.+++.+||+.||++|||+.|+++
T Consensus 312 ~~~~~i~---~~~~~~~--~~~-~~~~----~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 312 LMLRMIM---EGQYQFS--SPE-WDDR----SSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHHHH---HTCCCCC--HHH-HSSS----CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHH---hCCCCCC--Ccc-cccC----CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2222111 1111100 000 0111 123778999999999999999999986
No 177
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=342.87 Aligned_cols=264 Identities=16% Similarity=0.177 Sum_probs=202.4
Q ss_pred hcCcccccccccccCeeEEEEEecCC-------CCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGS-------NGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRH 408 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h 408 (633)
.++|++.+.||+|+||.||+|+.... +++.||+|++... +.+.+|++++++++|
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------------------~~~~~E~~~l~~l~h 101 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------------------GRLFNEQNFFQRAAK 101 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------------------STHHHHHHHHHHHCC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------------------chHHHHHHHHHHhcc
Confidence 46899999999999999999987632 4889999998532 246788999999999
Q ss_pred Ccccc---------------cceeeec-CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 006739 409 RNLLP---------------LLAHMAR-PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHIS 472 (633)
Q Consensus 409 ~niv~---------------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~ 472 (633)
|||++ +++++.. ....++||||+ +++|.+++.... ...+++..++.++.|+++||+||
T Consensus 102 ~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~L--- 175 (352)
T 2jii_A 102 PLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFL--- 175 (352)
T ss_dssp HHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHH---
T ss_pred cchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHH---
Confidence 99887 5666665 67789999999 999999998632 35699999999999999999999
Q ss_pred CCCCeeeCCCCCCCeEecCCC--ceEEcccccccccCCCCCcc-----eecccccCcccccccccccCCCCCccchHHHH
Q 006739 473 HNPRIIHRDLKPANVLLDDDM--EARIADFGLAKAMPDAQTHI-----TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFG 545 (633)
Q Consensus 473 h~~~ivH~Dikp~Nill~~~~--~~kl~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G 545 (633)
|+.+|+||||||+||+++.++ .+||+|||+++......... ......||+.|+|||++.+..++.++||||||
T Consensus 176 H~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 255 (352)
T 2jii_A 176 HENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLG 255 (352)
T ss_dssp HHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred HhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHH
Confidence 677999999999999999998 89999999998765432111 11335799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHH
Q 006739 546 VLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVR 625 (633)
Q Consensus 546 ~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~ 625 (633)
|++|||++|+.||..... ....+............ ...+........ ...+.+++.+||+.||++|||+++++
T Consensus 256 ~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~l~ 328 (352)
T 2jii_A 256 YCMLKWLYGFLPWTNCLP--NTEDIMKQKQKFVDKPG--PFVGPCGHWIRP---SETLQKYLKVVMALTYEEKPPYAMLR 328 (352)
T ss_dssp HHHHHHHHSCCTTGGGTT--CHHHHHHHHHHHHHSCC--CEECTTSCEECC---CHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred HHHHHHHhCCCCcccCCc--CHHHHHHHHHhccCChh--hhhhhccccCCC---cHHHHHHHHHHHhCChhhCCCHHHHH
Confidence 999999999999976432 12222222222221111 111111000111 13377888899999999999999999
Q ss_pred HHHHhh
Q 006739 626 CMLSQI 631 (633)
Q Consensus 626 ~~l~~~ 631 (633)
+.|+++
T Consensus 329 ~~L~~~ 334 (352)
T 2jii_A 329 NNLEAL 334 (352)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999886
No 178
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.5e-40 Score=368.03 Aligned_cols=252 Identities=25% Similarity=0.350 Sum_probs=196.8
Q ss_pred cccccccCeeEEEEEec-CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccceeeecC
Q 006739 343 EKIGSGGCGEVYKAELP-GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARP 421 (633)
Q Consensus 343 ~~ig~G~~g~Vy~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 421 (633)
+.||+|+||.||+|.+. ...++.||||+++....+.. ..+++.+|++++++++|||||++++++..
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~------------~~~~~~~E~~il~~l~hpnIv~l~~~~~~- 441 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA------------LKDELLAEANVMQQLDNPYIVRMIGICEA- 441 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGG------------GHHHHHHHHHHHHHCCCTTBCCEEEEEES-
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHH------------HHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 47999999999999663 23568999999864322111 14678999999999999999999999864
Q ss_pred CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceEEcccc
Q 006739 422 DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFG 501 (633)
Q Consensus 422 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~kl~DfG 501 (633)
+..++||||+++|+|.+++.. ...+++..+..|+.||+.||+|| |+.+|+||||||+|||++.++.+||+|||
T Consensus 442 ~~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yL---H~~~iiHrDLkp~NILl~~~~~~kL~DFG 514 (635)
T 4fl3_A 442 ESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFG 514 (635)
T ss_dssp SSEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCTT
T ss_pred CCEEEEEEccCCCCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHH---HHCCEeCCCCChHhEEEeCCCCEEEEEcC
Confidence 557899999999999999975 35689999999999999999999 67899999999999999999999999999
Q ss_pred cccccCCCCCc-ceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchHHHHHHHhhc
Q 006739 502 LAKAMPDAQTH-ITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSLVKWMRNVMT 579 (633)
Q Consensus 502 ~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 579 (633)
+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ..+.+.+..
T Consensus 515 la~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~----~~~~~~i~~--- 587 (635)
T 4fl3_A 515 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG----SEVTAMLEK--- 587 (635)
T ss_dssp HHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHHHHHT---
T ss_pred CccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHc---
Confidence 99987654322 12233457889999999999999999999999999999998 9999976422 222222221
Q ss_pred cCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 580 SENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 580 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
..... .+......+.+++..||+.||++||++.++++.|+++
T Consensus 588 ~~~~~----------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 588 GERMG----------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp TCCCC----------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCC----------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 11111 0111223478899999999999999999999999876
No 179
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.5e-40 Score=348.65 Aligned_cols=261 Identities=23% Similarity=0.324 Sum_probs=191.9
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|.+.+.||+|+||.||+|... .+++.||||++.......... ........+.+|++++++++||||+++
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~~~~~------~~~~~~~~~~~E~~~l~~l~hpniv~l 205 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFER-KTCKKVAIRIISKRKFAIGSA------READPALNVETEIEILKKLNHPCIIKI 205 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEGGGGTTC--------------CCHHHHHHHHHHCCCTTBCCC
T ss_pred hhccEEEEeEEeeCCCeEEEEEEEC-CCCcEEEEEEEEechhccccc------ccchhHHHHHHHHHHHHhCCCCCEeeE
Confidence 3578999999999999999999865 578999999986533211110 001113457899999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC-
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM- 493 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~- 493 (633)
++++.. +..++||||+++|+|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+|||++.++
T Consensus 206 ~~~~~~-~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivHrDlkp~NIll~~~~~ 277 (419)
T 3i6u_A 206 KNFFDA-EDYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPENVLLSSQEE 277 (419)
T ss_dssp CEEEES-SEEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESSSSS
T ss_pred EEEEec-CceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEecCCC
Confidence 999754 457899999999999988864 45699999999999999999999 677999999999999997544
Q ss_pred --ceEEcccccccccCCCCCcceecccccCccccccccccc---CCCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 494 --EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT---LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 494 --~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ..
T Consensus 278 ~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~---~~ 351 (419)
T 3i6u_A 278 DCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---QV 351 (419)
T ss_dssp SCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS---SC
T ss_pred cceEEEeecccceecCCCcc---ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc---hH
Confidence 599999999987654322 234679999999999854 5678899999999999999999999975322 22
Q ss_pred hHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+.+.+....... .+..... ....+.+++.+||+.||++|||++|+++
T Consensus 352 ~~~~~i~~~~~~~------~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 352 SLKDQITSGKYNF------IPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp CHHHHHHTTCCCC------CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhcCCCCC------Cchhhcc----cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 2222222111100 0111111 1234788999999999999999999986
No 180
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.2e-40 Score=341.22 Aligned_cols=259 Identities=25% Similarity=0.355 Sum_probs=202.8
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeE--EEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKM--IAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLL 412 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~--vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv 412 (633)
.++|+..+.||+|+||.||+|+.. .++.. +|+|.+...... ...+.+.+|+++++++ +||||+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~~v~iK~~~~~~~~-------------~~~~~~~~E~~~l~~l~~hp~iv 89 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIK-KDGLRMDAAIKRMKEYASK-------------DDHRDFAGELEVLCKLGHHPNII 89 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEE-ETTEEEEEEEEEEECC-------------------CHHHHHHHHHTTCCCCTTBC
T ss_pred HHHccceeeeecCCCceEEEEEEc-cCCcccceeeeeeccccch-------------HHHHHHHHHHHHHHhccCCCchh
Confidence 368999999999999999999875 35654 499988643211 1145688999999999 899999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhc------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVS------------QGRRELDWLARHKIALGVACGLEYLHISHNPRIIHR 480 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~ 480 (633)
++++++.+.+..++||||+++|+|.+++.... .....+++..++.++.|+++||+|| |+.+|+||
T Consensus 90 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~ 166 (327)
T 1fvr_A 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHR 166 (327)
T ss_dssp CEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHH---HHTTEECS
T ss_pred hhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCccCC
Confidence 99999999999999999999999999997633 2235799999999999999999999 67899999
Q ss_pred CCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCc
Q 006739 481 DLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSD 559 (633)
Q Consensus 481 Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~ 559 (633)
||||+||+++.++.+||+|||+++....... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 167 dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~ 243 (327)
T 1fvr_A 167 DLAARNILVGENYVAKIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 243 (327)
T ss_dssp CCSGGGEEECGGGCEEECCTTCEESSCEECC---C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred CCccceEEEcCCCeEEEcccCcCcccccccc---ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999875432211 123457889999999988889999999999999999998 999986
Q ss_pred ccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 560 DFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
.... . +............. .......+.+++.+||+.||++|||++|+++.|+++
T Consensus 244 ~~~~----~---~~~~~~~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 244 GMTC----A---ELYEKLPQGYRLEK----------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp TCCH----H---HHHHHGGGTCCCCC----------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcH----H---HHHHHhhcCCCCCC----------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 5321 1 12222222111110 011123478899999999999999999999999876
No 181
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=9e-40 Score=335.12 Aligned_cols=258 Identities=20% Similarity=0.284 Sum_probs=198.0
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC-CCccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-HRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l 414 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++.... .+.+.+|+.++++++ ||||+++
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~-----------------~~~~~~E~~~l~~l~~~~~i~~~ 96 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINI-TNNEKVVVKILKPVK-----------------KKKIKREIKILENLRGGPNIITL 96 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECSCC-----------------HHHHHHHHHHHHHHTTSTTBCCE
T ss_pred CCceEEEEEecccCCeEEEEEEEC-CCCcEEEEEEecccc-----------------hHHHHHHHHHHHHcCCCCCEEEe
Confidence 478999999999999999999864 578999999986432 356788999999997 9999999
Q ss_pred ceeeec--CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 415 LAHMAR--PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 415 ~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++.+ ....++||||+++++|.+++.. +++..+..++.|+++||+|| |+.+|+||||||+||+++.+
T Consensus 97 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~ 166 (330)
T 3nsz_A 97 ADIVKDPVSRTPALVFEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYC---HSMGIMHRDVKPHNVMIDHE 166 (330)
T ss_dssp EEEEECTTTCCEEEEEECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETT
T ss_pred eeeeccCCCCceEEEEeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEEcCC
Confidence 999987 5678999999999999998853 88899999999999999999 67899999999999999977
Q ss_pred C-ceEEcccccccccCCCCCcceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcccccccccchH
Q 006739 493 M-EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSL 570 (633)
Q Consensus 493 ~-~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~ 570 (633)
+ .+||+|||+++........ ....||..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...+
T Consensus 167 ~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~--~~~l 241 (330)
T 3nsz_A 167 HRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQL 241 (330)
T ss_dssp TTEEEECCCTTCEECCTTCCC---CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH--HHHH
T ss_pred CCEEEEEeCCCceEcCCCCcc---ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch--HHHH
Confidence 6 8999999999876654332 33578999999999877 67899999999999999999999998543221 1111
Q ss_pred HHHHH------------HhhccCCc----------chhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 571 VKWMR------------NVMTSENP----------TRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 571 ~~~~~------------~~~~~~~~----------~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
..... ........ ...................+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 242 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11111 10000000 0000000000001112345788999999999999999999986
No 182
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.1e-39 Score=332.22 Aligned_cols=262 Identities=23% Similarity=0.334 Sum_probs=194.5
Q ss_pred hcCcccc-cccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCcccc
Q 006739 336 EDGLASL-EKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLP 413 (633)
Q Consensus 336 ~~~~~~~-~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~ 413 (633)
.+.|++. +.||+|+||.||+|+.. .+++.||||++....... ...+.+|++++.++ +||||++
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~~~~h~~i~~ 75 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINL-ITSQEYAVKIIEKQPGHI--------------RSRVFREVEMLYQCQGHRNVLE 75 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECS-SSCCEEEEEEEECCSSCC--------------HHHHHHHHHHHHHTCCCTTBCC
T ss_pred ceeEEecCceecCCceEEEEEEEEc-CCCcEEEEEEEeeCcchh--------------HHHHHHHHHHHHHhcCCCCeee
Confidence 3567774 78999999999999854 578999999986543211 34678899999885 7999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++.+.+..++||||+++|+|.+++... ..+++..+..++.|+++||+|| |+.+|+||||||+||+++.++
T Consensus 76 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~ 148 (316)
T 2ac3_A 76 LIEFFEEEDRFYLVFEKMRGGSILSHIHKR----RHFNELEASVVVQDVASALDFL---HNKGIAHRDLKPENILCEHPN 148 (316)
T ss_dssp EEEEEEETTEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEESCSS
T ss_pred EEEEEeeCCEEEEEEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHH---HhCCceeCCCCHHHEEEccCC
Confidence 999999999999999999999999999763 4589999999999999999999 677999999999999999877
Q ss_pred c---eEEcccccccccCCCCCc-----ceecccccCccccccccccc-----CCCCCccchHHHHHHHHHHHhCCCCCcc
Q 006739 494 E---ARIADFGLAKAMPDAQTH-----ITTSNVAGTVGYIAPEYHQT-----LKFTDKCDIYSFGVLLAVLVMGRLPSDD 560 (633)
Q Consensus 494 ~---~kl~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~elltg~~p~~~ 560 (633)
. +||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 149 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 228 (316)
T 2ac3_A 149 QVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228 (316)
T ss_dssp SSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcc
Confidence 6 999999998865432111 11123469999999999875 5588999999999999999999999976
Q ss_pred cccccccc--------hHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 561 FFQHTEEM--------SLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 561 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
........ ................ ....... ....+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 229 RCGSDCGWDRGEACPACQNMLFESIQEGKYEF---PDKDWAH----ISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CCCSCSCC----CCHHHHHHHHHHHHHCCCCC---CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cccccccccccccchhHHHHHHHHHhccCccc---Cchhccc----CCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 43221000 0011111111111100 0000001 1234788999999999999999999986
No 183
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.3e-39 Score=326.61 Aligned_cols=250 Identities=25% Similarity=0.333 Sum_probs=201.9
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++...... .....+.+.+|++++++++||||++++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~i~~~~ 80 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREK-QNKFIMALKVLFKSQLE-----------KEGVEHQLRREIEIQSHLRHPNILRMY 80 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEHHHHH-----------HTTCHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred hhhceeeheecCCCCeEEEEEEEc-CCCcEEEEEEEcccccc-----------hHHHHHHHHHHHHHHhcCCCCCEeeEE
Confidence 468999999999999999999874 57889999998432110 011145788999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++.+.+..++||||+++|+|.+++... ..+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+
T Consensus 81 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~ 153 (284)
T 2vgo_A 81 NYFHDRKRIYLMLEFAPRGELYKELQKH----GRFDEQRSATFMEELADALHYC---HERKVIHRDIKPENLLMGYKGEL 153 (284)
T ss_dssp EEEECSSEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECTTCCE
T ss_pred EEEEcCCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEEcCCCCE
Confidence 9999999999999999999999999763 4589999999999999999999 68899999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
||+|||++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ... ..
T Consensus 154 kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~---~~ 222 (284)
T 2vgo_A 154 KIADFGWSVHAPSLR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH----TET---HR 222 (284)
T ss_dssp EECCCTTCEECSSSC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH----HHH---HH
T ss_pred EEecccccccCcccc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH----hHH---HH
Confidence 999999987654432 1345789999999999999999999999999999999999999875321 111 11
Q ss_pred HhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 576 NVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 576 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
........ . +......+.+++.+||+.||++|||++++++
T Consensus 223 ~~~~~~~~-------~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 223 RIVNVDLK-------F----PPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHTTCCC-------C----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhccccC-------C----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 11111110 0 0011223778999999999999999999985
No 184
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.2e-39 Score=328.52 Aligned_cols=252 Identities=22% Similarity=0.336 Sum_probs=203.4
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|.+.+.||+|+||.||++... .+++.||+|++....... ....+.+.+|+.+++.++||||+++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~iv~~ 80 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLK-----------PHQREKMSMEISIHRSLAHQHVVGF 80 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCCS-----------HHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred cccceEEEEEEeecCCEEEEEEEEC-CCCceEEEEEechhhccC-----------HHHHHHHHHHHHHHHhCCCCCEeee
Confidence 3468999999999999999999874 578899999985432110 0124578899999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+.+..++||||+++++|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~ 153 (294)
T 2rku_A 81 HGFFEDNDFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYL---HRNRVIHRDLKLGNLFLNEDLE 153 (294)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCC
T ss_pred eeeeccCCEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEcCCCC
Confidence 9999999999999999999999998875 24689999999999999999999 6779999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
+||+|||+++........ .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... .. ..
T Consensus 154 ~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~---~~ 224 (294)
T 2rku_A 154 VKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL----KE---TY 224 (294)
T ss_dssp EEECCCTTCEECCSTTCC--BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH----HH---HH
T ss_pred EEEEeccCceecccCccc--cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HH---HH
Confidence 999999999876543222 2345789999999999998899999999999999999999999875321 11 11
Q ss_pred HHhhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 575 RNVMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
....... .....+ ...+.+++.+||+.||++|||++|+++
T Consensus 225 ~~~~~~~~~~~~~~------------~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 225 LRIKKNEYSIPKHI------------NPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp HHHHTTCCCCCTTS------------CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHhhccCCCcccc------------CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1111111 111111 123778899999999999999999876
No 185
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.6e-40 Score=333.72 Aligned_cols=269 Identities=27% Similarity=0.370 Sum_probs=186.1
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|++.+.||+|+||.||+|... .+++.||||++..... ....+++.+|+.++++++||||+
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~i~ 76 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCA-PKKEKVAIKRINLEKC-------------QTSMDELLKEIQAMSQCHHPNIV 76 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC-----CEEEEECCC-----------------------------CCCCCCCTTBC
T ss_pred ccchhhhhhhheeccccceEEEEEEEC-CCCcEEEEEEEEhhhc-------------chhHHHHHHHHHHHhhcCCCCEe
Confidence 445678999999999999999999754 4788999998854321 11145688999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeE
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQ----GRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVL 488 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nil 488 (633)
++++++...+..++||||+++++|.+++..... ....+++..+..++.|+++||+|| |+.+|+||||||+||+
T Consensus 77 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~Nil 153 (303)
T 2vwi_A 77 SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL---HKNGQIHRDVKAGNIL 153 (303)
T ss_dssp CEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEE
T ss_pred eEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHH---HhCCCCCCCCChhhEE
Confidence 999999999999999999999999999875321 235689999999999999999999 6779999999999999
Q ss_pred ecCCCceEEcccccccccCCCCCc---ceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcccccc
Q 006739 489 LDDDMEARIADFGLAKAMPDAQTH---ITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQH 564 (633)
Q Consensus 489 l~~~~~~kl~DfG~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~ 564 (633)
++.++.+||+|||++......... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......
T Consensus 154 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 233 (303)
T 2vwi_A 154 LGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM 233 (303)
T ss_dssp ECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG
T ss_pred EcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh
Confidence 999999999999999876543211 11234568999999999876 56899999999999999999999999764321
Q ss_pred cccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 565 TEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
......... ..........+....... ...+.+++.+||+.||++|||+.|+++
T Consensus 234 ---~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 234 ---KVLMLTLQN-DPPSLETGVQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp ---GHHHHHHTS-SCCCTTC-----CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---hHHHHHhcc-CCCccccccccchhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 111111100 000000001111111111 234778889999999999999999986
No 186
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1e-39 Score=335.14 Aligned_cols=253 Identities=21% Similarity=0.331 Sum_probs=203.6
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
...+|.+.+.||+|+||.||+++.. .+++.||+|++....... ....+.+.+|+.+++.++||||+++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h~~iv~~ 106 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLK-----------PHQREKMSMEISIHRSLAHQHVVGF 106 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCCS-----------HHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEechhhhcC-----------HHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 3468999999999999999999875 578899999985432110 0124678899999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+.+..++||||+++++|.+++.. ...+++..++.++.|+++||+|| |+.+|+||||||+||+++.++.
T Consensus 107 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~~~~ 179 (335)
T 2owb_A 107 HGFFEDNDFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYL---HRNRVIHRDLKLGNLFLNEDLE 179 (335)
T ss_dssp EEEEECSSEEEEEECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCC
T ss_pred EEEEecCCeEEEEEecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHH---HHCCCEecCCCchhEEEcCCCC
Confidence 9999999999999999999999999875 24689999999999999999999 6779999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
+||+|||+++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+
T Consensus 180 ~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~ 253 (335)
T 2owb_A 180 VKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL----KETYLRI 253 (335)
T ss_dssp EEECCCTTCEECCSTTCC--BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHH
T ss_pred EEEeeccCceecccCccc--ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH----HHHHHHH
Confidence 999999999876543222 2345789999999999998999999999999999999999999875321 1111111
Q ss_pred HHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 575 RNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.. ........+ ...+.+++.+||+.||++|||++|+++
T Consensus 254 ~~--~~~~~~~~~------------~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 254 KK--NEYSIPKHI------------NPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HH--TCCCCCTTS------------CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hc--CCCCCCccC------------CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 111111111 123678899999999999999999876
No 187
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.7e-41 Score=350.33 Aligned_cols=248 Identities=15% Similarity=0.160 Sum_probs=188.3
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHH---HHhhcCCCCcc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEI---NTVGQIRHRNL 411 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~ni 411 (633)
..+.|++.+.||+|+||.||+|++. .+|+.||||++......... ..+.+.+|+ +++++++||||
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~~~~-----------~~~~~~~E~~~l~~l~~l~hpni 138 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQ-ETGESFEVHVPYFTERPPSN-----------AIKQMKEEVLRLRLLRGIKNQKQ 138 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC--CCCCEEEEEEEEECC-CCTT-----------HHHHHHHHHHGGGGSTTCCSHHH
T ss_pred CCceEEEcceeecCCCEEEEEEEEC-CCCcEEEEEEEeeccccchH-----------HHHHHHHHHHHHHhccccCCHHH
Confidence 4577999999999999999999864 47899999998744221111 146788899 55666689999
Q ss_pred cccc-------eeeecCC-----------------ccEEEEecccCCCHHHHHhhhcC---CCCCCCHHHHHHHHHHHHH
Q 006739 412 LPLL-------AHMARPD-----------------CHLLVYEFMKNGSLQDILNDVSQ---GRRELDWLARHKIALGVAC 464 (633)
Q Consensus 412 v~l~-------~~~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~ 464 (633)
|+++ +++.+++ ..++||||+ +|+|.+++..... ....+++..++.|+.||++
T Consensus 139 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~ 217 (377)
T 3byv_A 139 AKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIR 217 (377)
T ss_dssp HHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHH
Confidence 9998 5555443 278999999 6899999986432 1223556889999999999
Q ss_pred HHHHHHhcCCCCeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccC-----------
Q 006739 465 GLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTL----------- 533 (633)
Q Consensus 465 ~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------- 533 (633)
||+|| |+.+|+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+.
T Consensus 218 aL~~L---H~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~ 288 (377)
T 3byv_A 218 LLASL---HHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRT 288 (377)
T ss_dssp HHHHH---HHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEE
T ss_pred HHHHH---HhCCeecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccc
Confidence 99999 677999999999999999999999999999986433 2234567 999999999887
Q ss_pred CCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccC
Q 006739 534 KFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVD 613 (633)
Q Consensus 534 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~ 613 (633)
.++.++|||||||++|||++|+.||........... .... . ... ...+.+++.+||+.
T Consensus 289 ~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~-------~~~~-~----------~~~----~~~~~~li~~~L~~ 346 (377)
T 3byv_A 289 LMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEW-------IFRS-C----------KNI----PQPVRALLEGFLRY 346 (377)
T ss_dssp ECCHHHHHHHHHHHHHHHHHSSCCC------CCSGG-------GGSS-C----------CCC----CHHHHHHHHHHTCS
T ss_pred cCChhhhHHHHHHHHHHHHHCCCCCcccccccchhh-------hhhh-c----------cCC----CHHHHHHHHHHcCC
Confidence 899999999999999999999999965332111100 0000 0 011 12377899999999
Q ss_pred CCCCCCCHHHHHH
Q 006739 614 SPRERPNSKDVRC 626 (633)
Q Consensus 614 dP~~RPs~~ev~~ 626 (633)
||++|||+.|+++
T Consensus 347 dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 347 PKEDRLLPLQAME 359 (377)
T ss_dssp SGGGCCCHHHHHT
T ss_pred CchhCCCHHHHhh
Confidence 9999999999986
No 188
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.8e-40 Score=347.21 Aligned_cols=262 Identities=21% Similarity=0.294 Sum_probs=197.6
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|++.+.||+|+||.||+|+.. .+|+.||+|++..... ...+|+++++.++||||+++
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~~~~~~~------------------~~~~E~~il~~l~hpnIv~l 65 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDI-ESGKRFALKKVLQDPR------------------YKNRELDIMKVLDHVNIIKL 65 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEET-TTCCEEEEEEEECCTT------------------SCCHHHHHHTTCCCTTBCCE
T ss_pred ccceEEEEEEEEeccCEEEEEEEEC-CCCCEEEEEEEecCcc------------------hHHHHHHHHHHcCCCCccch
Confidence 4578999999999999999999864 5789999999864321 22368999999999999999
Q ss_pred ceeeecC--------------------------------------CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHH
Q 006739 415 LAHMARP--------------------------------------DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARH 456 (633)
Q Consensus 415 ~~~~~~~--------------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~ 456 (633)
++++... ...++||||++ |+|.+.+.........+++..+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~ 144 (383)
T 3eb0_A 66 VDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLIS 144 (383)
T ss_dssp EEEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHH
T ss_pred hheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHH
Confidence 9998443 33789999997 58888887655556789999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec-CCCceEEcccccccccCCCCCcceecccccCcccccccccccC-C
Q 006739 457 KIALGVACGLEYLHISHNPRIIHRDLKPANVLLD-DDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTL-K 534 (633)
Q Consensus 457 ~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~-~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~ 534 (633)
.++.|+++||+|| |+.+|+||||||+||+++ .++.+||+|||+++........ ....||+.|+|||.+.+. .
T Consensus 145 ~i~~qi~~aL~~L---H~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 218 (383)
T 3eb0_A 145 IYIYQLFRAVGFI---HSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS---VAYICSRFYRAPELMLGATE 218 (383)
T ss_dssp HHHHHHHHHHHHH---HTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC---CCCCCCSSCCCHHHHTTCSS
T ss_pred HHHHHHHHHHHHH---HHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC---cCcccCCCccCHHHhcCCCC
Confidence 9999999999999 688999999999999998 6889999999999876554322 335789999999988764 4
Q ss_pred CCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHHHhhccCCcchhh---------------hhhhhhcCCHHH
Q 006739 535 FTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAI---------------DAKLLENGYEEQ 599 (633)
Q Consensus 535 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------d~~~~~~~~~~~ 599 (633)
++.++||||+||++|||++|+.||..... ...+.+.++ ........... ............
T Consensus 219 ~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~~i~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (383)
T 3eb0_A 219 YTPSIDLWSIGCVFGELILGKPLFSGETS---IDQLVRIIQ-IMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGT 294 (383)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHH-HHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTC
T ss_pred CCcchhhhhHHHHHHHHHhCCCCCCCCCh---HHHHHHHHH-HhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCC
Confidence 89999999999999999999999976322 122222221 11111000000 000000011112
Q ss_pred HHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 600 MLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 600 ~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
...+.+++.+||+.||++|||+.|+++
T Consensus 295 ~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 295 PSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 234788999999999999999999974
No 189
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=6.2e-40 Score=332.07 Aligned_cols=252 Identities=29% Similarity=0.455 Sum_probs=204.4
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..+.|+..+.||+|+||.||+|+.. .+++.||+|++....... ..+.+.+|+.++++++||||+++
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~-------------~~~~~~~e~~~l~~l~h~~i~~~ 85 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDN-RTQKVVAIKIIDLEEAED-------------EIEDIQQEITVLSQCDSPYVTKY 85 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEETTTCST-------------THHHHHHHHHHHHHCCCTTBCCE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEEC-CCCcEEEEEEecccccHH-------------HHHHHHHHHHHHHhCCCCCEeEE
Confidence 4567999999999999999999864 578999999986543211 14578899999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+....++||||+++++|.+++.. ..+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~ 157 (303)
T 3a7i_A 86 YGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYL---HSEKKIHRDIKAANVLLSEHGE 157 (303)
T ss_dssp EEEEEETTEEEEEEECCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSC
T ss_pred EEEEecCCeEEEEEEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCChheEEECCCCC
Confidence 9999999999999999999999999863 4689999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
+||+|||++......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+
T Consensus 158 ~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~ 231 (303)
T 3a7i_A 158 VKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP----MKVLFLI 231 (303)
T ss_dssp EEECCCTTCEECBTTBCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHHH
T ss_pred EEEeecccceecCccccc--cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH----HHHHHHh
Confidence 999999999876543321 2345789999999999999999999999999999999999999875321 1111111
Q ss_pred HHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHH
Q 006739 575 RNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCM 627 (633)
Q Consensus 575 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~ 627 (633)
.. ..... +... . ...+.+++..||+.||++|||+.|+++.
T Consensus 232 ~~---~~~~~------~~~~-~---~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 232 PK---NNPPT------LEGN-Y---SKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp HH---SCCCC------CCSS-C---CHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred hc---CCCCC------Cccc-c---CHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 11 11100 0011 1 1237788999999999999999999863
No 190
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.2e-40 Score=331.50 Aligned_cols=249 Identities=21% Similarity=0.313 Sum_probs=197.3
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 414 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++........ ...++.+|+..+..+ +||||+++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~------------~~~~~~~e~~~~~~l~~h~~iv~~ 76 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKR-LDGCIYAIKRSKKPLAGSV------------DEQNALREVYAHAVLGQHSHVVRY 76 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCCTTSH------------HHHHHHHHHHHHHHSCSCTTBCCE
T ss_pred cchhhhhhhhcCCCceEEEEEEEc-CCCceEEEEEecccccccH------------HHHHHHHHHHHHHHhCCCCCeeee
Confidence 467999999999999999999864 5789999999876432211 145677889999988 89999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC--
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD-- 492 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~-- 492 (633)
++++.+.+..++||||+++++|.+++.........+++..++.++.|+++||+|| |+.+|+||||||+||+++.+
T Consensus 77 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dikp~NIl~~~~~~ 153 (289)
T 1x8b_A 77 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI---HSMSLVHMDIKPSNIFISRTSI 153 (289)
T ss_dssp EEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEC----
T ss_pred eeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH---HhCCEeecCCCHHHEEEcCCCC
Confidence 9999999999999999999999999987544346799999999999999999999 67899999999999999844
Q ss_pred -----------------CceEEcccccccccCCCCCcceecccccCcccccccccccC-CCCCccchHHHHHHHHHHHhC
Q 006739 493 -----------------MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTL-KFTDKCDIYSFGVLLAVLVMG 554 (633)
Q Consensus 493 -----------------~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg 554 (633)
..+||+|||.+....... ...||+.|+|||.+.+. .++.++|||||||++|||++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~ 227 (289)
T 1x8b_A 154 PNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGA 227 (289)
T ss_dssp ----------------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTC
T ss_pred CcccccccccccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcC
Confidence 479999999998765432 23589999999998765 566799999999999999999
Q ss_pred CCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 555 RLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 555 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
..|+.... .... + ...... . +... ....+.+++.+||+.||++|||+.|+++
T Consensus 228 ~~~~~~~~------~~~~-~---~~~~~~-~-----~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 228 EPLPRNGD------QWHE-I---RQGRLP-R-----IPQV----LSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp CCCCSSSH------HHHH-H---HTTCCC-C-----CSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCcchh------HHHH-H---HcCCCC-C-----CCcc----cCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 98754311 1111 1 111110 0 0011 1233778899999999999999999975
No 191
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-40 Score=342.37 Aligned_cols=260 Identities=22% Similarity=0.321 Sum_probs=200.5
Q ss_pred hcCcccccccccccCeeEEEEEec--CCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELP--GSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLL 412 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv 412 (633)
.++|++.+.||+|+||.||+++.. ..+++.||||++.......... ....+.+|++++.++ +||||+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~----------~~~~~~~E~~~l~~l~~h~~iv 122 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAK----------TTEHTRTERQVLEHIRQSPFLV 122 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEES----------SGGGCCCHHHHHHHHHTCTTBC
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhh----------HHHHHHHHHHHHHHccCCCcee
Confidence 468999999999999999999873 2478999999986432110000 023466788899988 699999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++...+..++||||+++|+|.+++... ..+++..+..++.|+++||+|| |+.+|+||||||+|||++.+
T Consensus 123 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~ 195 (355)
T 1vzo_A 123 TLHYAFQTETKLHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHL---HKLGIIYRDIKLENILLDSN 195 (355)
T ss_dssp CEEEEEEETTEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTT
T ss_pred EEEEEEeeCceEEEEeecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCC
Confidence 9999999999999999999999999999763 4589999999999999999999 67799999999999999999
Q ss_pred CceEEcccccccccCCCCCcceecccccCccccccccccc--CCCCCccchHHHHHHHHHHHhCCCCCcccccccccchH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT--LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSL 570 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~ 570 (633)
+.+||+|||+++......... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .
T Consensus 196 ~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~---~ 271 (355)
T 1vzo_A 196 GHVVLTDFGLSKEFVADETER-AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS---Q 271 (355)
T ss_dssp SCEEESCSSEEEECCGGGGGG-GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC---H
T ss_pred CcEEEeeCCCCeecccCCCCc-ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch---H
Confidence 999999999998765432221 234579999999999986 3478899999999999999999999975432222 2
Q ss_pred HHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCC-----CHHHHHHH
Q 006739 571 VKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERP-----NSKDVRCM 627 (633)
Q Consensus 571 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~ev~~~ 627 (633)
..+.+......... +......+.+++.+||+.||++|| +++|+++.
T Consensus 272 ~~~~~~~~~~~~~~-----------~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 272 AEISRRILKSEPPY-----------PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHHHHHHHCCCCC-----------CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHHHHHhccCCCC-----------CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 22222222211110 111123377899999999999999 89998763
No 192
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.4e-40 Score=337.96 Aligned_cols=270 Identities=25% Similarity=0.352 Sum_probs=202.0
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|++.+.||+|+||.||+|+.. .+|+.||+|++......... ...+.+|++++++++||||+
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~------------~~~~~~E~~~l~~l~h~~iv 79 (351)
T 3mi9_A 13 CDEVSKYEKLAKIGQGTFGEVFKARHR-KTGQKVALKKVLMENEKEGF------------PITALREIKILQLLKHENVV 79 (351)
T ss_dssp SCBGGGEEEEEECSSCSTTSEEEEEET-TTCCEEEEEECCCSSCSSSS------------CHHHHHHHHHHHHCCCTTBC
T ss_pred cccccceeEEEEEecCCCcEEEEEEEC-CCCCEEEEEEEecccccccc------------hHHHHHHHHHHHhccCCCcc
Confidence 344578999999999999999999874 57899999998655432111 23567899999999999999
Q ss_pred ccceeeecC--------CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCC
Q 006739 413 PLLAHMARP--------DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKP 484 (633)
Q Consensus 413 ~l~~~~~~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp 484 (633)
++++++... +..++||||+++ +|.+.+... ...+++..+..++.|++.||+|| |+.+|+||||||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp 152 (351)
T 3mi9_A 80 NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYI---HRNKILHRDMKA 152 (351)
T ss_dssp CEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSG
T ss_pred cHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCH
Confidence 999998763 467899999975 777777542 34699999999999999999999 678999999999
Q ss_pred CCeEecCCCceEEcccccccccCCCCCc--ceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCccc
Q 006739 485 ANVLLDDDMEARIADFGLAKAMPDAQTH--ITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDF 561 (633)
Q Consensus 485 ~Nill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~ 561 (633)
+||+++.++.+||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 153 ~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 232 (351)
T 3mi9_A 153 ANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232 (351)
T ss_dssp GGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred HHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999876533221 12234578999999998876 45899999999999999999999998763
Q ss_pred ccccccchHHHHHHHhhccCCcch--hhhh-hhhh---------cCCHHH------HHHHHHHHhHhccCCCCCCCCHHH
Q 006739 562 FQHTEEMSLVKWMRNVMTSENPTR--AIDA-KLLE---------NGYEEQ------MLLVLKIACFCTVDSPRERPNSKD 623 (633)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~--~~d~-~~~~---------~~~~~~------~~~~~~l~~~cl~~dP~~RPs~~e 623 (633)
.. ......+........... ..+. .... ....+. ...+.+++.+||+.||++|||++|
T Consensus 233 ~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 308 (351)
T 3mi9_A 233 TE----QHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDD 308 (351)
T ss_dssp SH----HHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred Ch----HHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHH
Confidence 22 222222322222111110 0000 0000 000111 123778999999999999999999
Q ss_pred HHH
Q 006739 624 VRC 626 (633)
Q Consensus 624 v~~ 626 (633)
+++
T Consensus 309 ~l~ 311 (351)
T 3mi9_A 309 ALN 311 (351)
T ss_dssp HHT
T ss_pred HhC
Confidence 975
No 193
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=7.1e-40 Score=337.34 Aligned_cols=257 Identities=23% Similarity=0.372 Sum_probs=198.8
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHH-hhcCCCCccc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINT-VGQIRHRNLL 412 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv 412 (633)
...++|+..+.||+|+||.||+|+.. .+|+.||||++........ ..++..|..+ ++.++||||+
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~-------------~~~~~~e~~~~~~~~~h~~iv 113 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHV-PSGQIMAVKRIRATVNSQE-------------QKRLLMDLDISMRTVDCPFTV 113 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSCCCCHH-------------HHHHHHHHHHHHTTCCCTTTC
T ss_pred EehhheeEeeEecccCCEEEEEEEEc-CCCCEEEEEEeccccCcHH-------------HHHHHHHHHHHHhhcCCCcEE
Confidence 34578999999999999999999864 5789999999865432210 2334444444 7888999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeeeCCCCCCCeEecC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNP-RIIHRDLKPANVLLDD 491 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~-~ivH~Dikp~Nill~~ 491 (633)
++++++...+..++||||+++ +|.+++.........+++..++.++.||++||+|| |+. +|+||||||+||+++.
T Consensus 114 ~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~l---H~~~~ivH~Dlkp~NIl~~~ 189 (340)
T 3an0_A 114 TFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL---HSKLSVIHRDVKPSNVLINA 189 (340)
T ss_dssp CEEEEEECSSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCSCCSTTEEECS
T ss_pred EEeeEEEeCCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECC
Confidence 999999999999999999975 99999876544567899999999999999999999 454 8999999999999999
Q ss_pred CCceEEcccccccccCCCCCcceecccccCcccccccccc----cCCCCCccchHHHHHHHHHHHhCCCCCccccccccc
Q 006739 492 DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQ----TLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEE 567 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~ 567 (633)
++.+||+|||+++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||..... ..
T Consensus 190 ~~~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~--~~ 264 (340)
T 3an0_A 190 LGQVKMCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT--PF 264 (340)
T ss_dssp TTCEEECCCSHHHHHSCHH---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC--HH
T ss_pred CCCEEEeeCCCceeccccc---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc--hH
Confidence 9999999999998765422 112357999999999964 34688999999999999999999999975321 11
Q ss_pred chHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 568 MSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
..+.+ ......... . ... ....+.+++.+||+.||++|||+.|+++
T Consensus 265 ~~~~~----~~~~~~~~~-~-----~~~---~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 265 QQLKQ----VVEEPSPQL-P-----ADK---FSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHHH----HHHSCCCCC-C-----GGG---SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHH----HhcCCCCCC-C-----ccc---CCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 11111 111111110 0 001 1233788999999999999999999976
No 194
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.9e-39 Score=350.83 Aligned_cols=253 Identities=24% Similarity=0.360 Sum_probs=196.1
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|++.+.||+|+||.||+|+.. .++..||+|++........ ....+.+|+.+++.++||||++++
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~------------~~~~~~~E~~~l~~l~hpniv~~~ 102 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDK-VTHVERAIKIIRKTSVSTS------------SNSKLLEEVAVLKLLDHPNIMKLY 102 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEET-TTCCEEEEEEEEC-----C------------TTHHHHHHHHHHTTCCCTTBCCEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEEC-CCCcEEEEEEEeccccCch------------HHHHHHHHHHHHHhCCCCCCCeEE
Confidence 357999999999999999999874 5789999999875432211 135678899999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC---
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD--- 492 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~--- 492 (633)
+++.+....++||||+++|+|.+.+... ..+++..+..++.||++||+|| |+.+|+||||||+||+++..
T Consensus 103 ~~~~~~~~~~lv~e~~~~g~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~ 175 (494)
T 3lij_A 103 DFFEDKRNYYLVMECYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYL---HKHNIVHRDLKPENLLLESKEKD 175 (494)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSTT
T ss_pred EEEEeCCEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCChhhEEEeCCCCC
Confidence 9999999999999999999999988753 4589999999999999999999 67899999999999999764
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+.+||+|||+++....... .....||+.|+|||++. ..++.++||||+||++|+|++|+.||..... ..+..
T Consensus 176 ~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~ 247 (494)
T 3lij_A 176 ALIKIVDFGLSAVFENQKK---MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD----QEILR 247 (494)
T ss_dssp CCEEECCCTTCEECBTTBC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH
T ss_pred CcEEEEECCCCeECCCCcc---ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH----HHHHH
Confidence 4599999999987654432 23457999999999886 4699999999999999999999999975321 22222
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+. ....... .+. .......+.+++.+||+.||.+|||+.|+++
T Consensus 248 ~i~---~~~~~~~--~~~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 248 KVE---KGKYTFD--SPE-----WKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp HHH---HTCCCCC--SGG-----GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHH---hCCCCCC--chh-----cccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 222 1111100 000 0011233778999999999999999999874
No 195
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=329.25 Aligned_cols=252 Identities=29% Similarity=0.418 Sum_probs=197.6
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..+.|++.+.||+|+||.||+|... .+|+.||+|.+..... .+.+.+|+.++++++||||+++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~----------------~~~~~~e~~~l~~l~h~~i~~~ 89 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHK-ETGQIVAIKQVPVESD----------------LQEIIKEISIMQQCDSPHVVKY 89 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEET-TTCCEEEEEEEETTSC----------------CHHHHHHHHHHHTCCCTTBCCE
T ss_pred chhhhhhheeeccCCCeEEEEEEEC-CCCCEEEEEecCchHH----------------HHHHHHHHHHHHhCCCCCCccE
Confidence 4578999999999999999999874 5789999999865321 3467889999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++...+..++||||+++++|.+++... ...+++..+..++.|++.||.|| |+.+|+|+||||+||+++.++.
T Consensus 90 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~ 163 (314)
T 3com_A 90 YGSYFKNTDLWIVMEYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYL---HFMRKIHRDIKAGNILLNTEGH 163 (314)
T ss_dssp EEEEEETTEEEEEEECCTTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCC
T ss_pred EEEEEeCCEEEEEeecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH---HhCCCcCCCcCHHHEEECCCCC
Confidence 99999999999999999999999998742 35689999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
+||+|||++......... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .....
T Consensus 164 ~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~-- 235 (314)
T 3com_A 164 AKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP----MRAIF-- 235 (314)
T ss_dssp EEECCCTTCEECBTTBSC--BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHH--
T ss_pred EEEeecccchhhhhhccc--cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh----HHHHH--
Confidence 999999999876543221 2345689999999999999999999999999999999999999875321 11111
Q ss_pred HHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 575 RNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
......... ...+ ......+.+++.+||+.||.+|||+.++++
T Consensus 236 -~~~~~~~~~-~~~~-------~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 236 -MIPTNPPPT-FRKP-------ELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -HHHHSCCCC-CSSG-------GGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -HHhcCCCcc-cCCc-------ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 111111110 0000 011234778999999999999999999975
No 196
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-40 Score=339.77 Aligned_cols=269 Identities=25% Similarity=0.309 Sum_probs=195.9
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
..++|++.+.||+|+||.||+|+.. .+|+.||||++........ .....+.+.+|++++++++||||+++
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~---------~~~~~~~~~~E~~~l~~l~h~~iv~~ 77 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDK-NTNQIVAIKKIKLGHRSEA---------KDGINRTALREIKLLQELSHPNIIGL 77 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECS-SCCSEEEEEEC---------------------CTHHHHHHHHHHHCCCTTBCCE
T ss_pred HhcccEEEeEEeecCCEEEEEEEEC-CCCcEEEEEEEecCCcchh---------hhhhhHHHHHHHHHHhhCCCCCCCeE
Confidence 3578999999999999999999864 4789999999864332110 01113467889999999999999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++.+.+..++||||+++ +|.+++.. ....+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.
T Consensus 78 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~ 150 (346)
T 1ua2_A 78 LDAFGHKSNISLVFDFMET-DLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYL---HQHWILHRDLKPNNLLLDENGV 150 (346)
T ss_dssp EEEECCTTCCEEEEECCSE-EHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCC
T ss_pred EEEEeeCCceEEEEEcCCC-CHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHH---HHCCEECCCCCHHHEEEcCCCC
Confidence 9999999999999999976 88888864 235688899999999999999999 6788999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTL-KFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKW 573 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~ 573 (633)
+||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||++|..||..... ...+.+.
T Consensus 151 ~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~---~~~~~~i 225 (346)
T 1ua2_A 151 LKLADFGLAKSFGSPNRA--YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD---LDQLTRI 225 (346)
T ss_dssp EEECCCGGGSTTTSCCCC--CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHH
T ss_pred EEEEecccceeccCCccc--CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH---HHHHHHH
Confidence 999999999876543322 2345789999999998764 578899999999999999999999865321 1222222
Q ss_pred HHHhhccCCcchhhhh----h-h----hhc-----CCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 574 MRNVMTSENPTRAIDA----K-L----LEN-----GYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 574 ~~~~~~~~~~~~~~d~----~-~----~~~-----~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.... .........+. . . ... ........+.+++.+||+.||++|||++|+++
T Consensus 226 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 226 FETL-GTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp HHHH-CCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHHc-CCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 2211 11100000000 0 0 000 00112245888999999999999999999986
No 197
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.7e-39 Score=350.60 Aligned_cols=253 Identities=25% Similarity=0.377 Sum_probs=199.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|++.+.||+|+||.||+|+.. .+++.||||++....... .....+.+|++++++++||||++++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hpniv~~~ 87 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDR-ITQQEYAVKVINKASAKN------------KDTSTILREVELLKKLDHPNIMKLF 87 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEET-TTCCEEEEEEEEHHHHBC------------SCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hcceEEeEEEeecCCEEEEEEEEC-CCCCEEEEEEEecccccc------------hHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 467999999999999999999864 578999999985321110 1145688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec---CC
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD---DD 492 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~---~~ 492 (633)
+++.+....++||||+++|+|.+.+... ..+++..+..++.|++.||+|| |+.+|+||||||+||+++ .+
T Consensus 88 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~Nil~~~~~~~ 160 (486)
T 3mwu_A 88 EILEDSSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYM---HKHNIVHRDLKPENILLESKEKD 160 (486)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEESSSSTT
T ss_pred EEEEcCCEEEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCchHHEEEecCCCC
Confidence 9999999999999999999999988753 4589999999999999999999 678999999999999995 45
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+.+||+|||+++....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... ...+.+
T Consensus 161 ~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~ 232 (486)
T 3mwu_A 161 CDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN----EYDILK 232 (486)
T ss_dssp CCEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHH
T ss_pred CCEEEEECCcCeECCCCCc---cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHH
Confidence 6799999999987655432 234579999999999876 58999999999999999999999986532 122222
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+. ........- . +......+.+++.+||+.||.+|||+.++++
T Consensus 233 ~i~---~~~~~~~~~--~-----~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 233 RVE---TGKYAFDLP--Q-----WRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp HHH---HTCCCSCSG--G-----GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHH---hCCCCCCCc--c-----cCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 222 111111000 0 0111233778999999999999999999986
No 198
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.4e-40 Score=350.01 Aligned_cols=261 Identities=23% Similarity=0.308 Sum_probs=195.1
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
...|+..+.||+|+||.||+|++. .+|+.||||++..... ...+|++++++++|||||+++
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~~vaiK~~~~~~~------------------~~~~E~~il~~l~hpniv~l~ 113 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLC-DSGELVAIKKVLQDKR------------------FKNRELQIMRKLDHCNIVRLR 113 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEECCTT------------------SCCHHHHHHHTCCCTTBCCEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEEC-CCCcEEEEEEecccch------------------hHHHHHHHHHHcCCCCcccee
Confidence 356899999999999999999875 4789999999854321 234689999999999999999
Q ss_pred eeeecC----C--ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 416 AHMARP----D--CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 416 ~~~~~~----~--~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++... + ..++||||+++ +|.+.+.........+++..+..++.||++||+|| |+.+|+||||||+|||+
T Consensus 114 ~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NILl 189 (420)
T 1j1b_A 114 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLL 189 (420)
T ss_dssp EEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCSGGGEEE
T ss_pred eEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChhhEEE
Confidence 988542 1 35689999975 77777765444567899999999999999999999 67899999999999999
Q ss_pred cCC-CceEEcccccccccCCCCCcceecccccCcccccccccccC-CCCCccchHHHHHHHHHHHhCCCCCccccccccc
Q 006739 490 DDD-MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTL-KFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEE 567 (633)
Q Consensus 490 ~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~ 567 (633)
+.+ +.+||+|||+++........ ....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+... .
T Consensus 190 ~~~~~~~kl~DFG~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~---~ 263 (420)
T 1j1b_A 190 DPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG---V 263 (420)
T ss_dssp ETTTTEEEECCCTTCEECCTTCCC---CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---H
T ss_pred eCCCCeEEeccchhhhhcccCCCc---eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH---H
Confidence 965 56899999999876544322 335789999999998764 789999999999999999999999976322 2
Q ss_pred chHHHHHHHhhccCCcc----------hhhhhhhhh-----cCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 568 MSLVKWMRNVMTSENPT----------RAIDAKLLE-----NGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 568 ~~~~~~~~~~~~~~~~~----------~~~d~~~~~-----~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
..+.+.++.. ...... +...+.+.. .........+.+++.+||+.||++|||+.|+++
T Consensus 264 ~~l~~i~~~l-g~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 264 DQLVEIIKVL-GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHHHHHH-CSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHh-CCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 2222322211 100000 000000000 000111235788999999999999999999975
No 199
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.2e-39 Score=328.16 Aligned_cols=251 Identities=24% Similarity=0.394 Sum_probs=199.7
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|.+.+.||+|+||.||+++.. .+|+.||+|++...... ....+.+|+.++++++||||++++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~ 72 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQR-LTGKLFALKCIKKSPAF--------------RDSSLENEIAVLKKIKHENIVTLE 72 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEECC--------------------HHHHHHHHHHHCCCTTBCCEE
T ss_pred hccceeeeeccCCCCceEEEEEEC-CCCCEEEEEEEeccccc--------------chHHHHHHHHHHHhCCCCCeeehh
Confidence 467899999999999999999864 57899999998654311 134678899999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe---cCC
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL---DDD 492 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill---~~~ 492 (633)
+++.+.+..++||||+++++|.+++... ..+++..+..++.|++.||+|| |+.+|+||||||+||++ +++
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dikp~NIl~~~~~~~ 145 (304)
T 2jam_A 73 DIYESTTHYYLVMQLVSGGELFDRILER----GVYTEKDASLVIQQVLSAVKYL---HENGIVHRDLKPENLLYLTPEEN 145 (304)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCSCCGGGCEESSSSTT
T ss_pred hhcccCCEEEEEEEcCCCccHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEecCCCC
Confidence 9999999999999999999999998752 4589999999999999999999 67899999999999999 788
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+.+||+|||+++...... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ..+.+
T Consensus 146 ~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~ 217 (304)
T 2jam_A 146 SKIMITDFGLSKMEQNGI----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE----SKLFE 217 (304)
T ss_dssp CCEEBCSCSTTCCCCCBT----THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHH
T ss_pred CCEEEccCCcceecCCCc----cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH----HHHHH
Confidence 899999999987654321 1234689999999999999999999999999999999999999865321 12222
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+. ...... .... .......+.+++.+||+.||++|||++|+++
T Consensus 218 ~i~---~~~~~~---~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 218 KIK---EGYYEF---ESPF----WDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHH---HCCCCC---CTTT----TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHH---cCCCCC---Cccc----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 121 111100 0000 0111234788999999999999999999975
No 200
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.7e-39 Score=350.59 Aligned_cols=264 Identities=25% Similarity=0.382 Sum_probs=200.1
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|++.++||+|+||.||+|+.. .+++.||+|++............ .....+...+.+.+|+.++++++||||++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~-~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEK-NGHSEKAIKVIKKSQFDKGRYSD-DNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEET-TTCCEEEEEEEEC-----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred ccceEEEeEecccCCeEEEEEEEC-CCCcEEEEEEEEhhhcccccccc-cchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 478999999999999999999875 57899999998765432110000 0011112256789999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC--
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM-- 493 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~-- 493 (633)
+++.+....++||||+++|+|.+++... ..+++..+..++.||+.||+|| |+.+|+||||||+||+++.++
T Consensus 113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 113 DVFEDKKYFYLVTEFYEGGELFEQIINR----HKFDECDAANIMKQILSGICYL---HKHNIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESSTTCC
T ss_pred EEEEcCCEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCcHHHEEEecCCCC
Confidence 9999999999999999999999998753 4599999999999999999999 678999999999999999776
Q ss_pred -ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 494 -EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 494 -~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
.+||+|||+++....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ..+..
T Consensus 186 ~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~ 257 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND----QDIIK 257 (504)
T ss_dssp SSEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH
T ss_pred ccEEEEECCCCEEcCCCCc---cccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHH
Confidence 699999999987765432 234579999999999874 689999999999999999999999975321 22222
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+ ........ ...... ....+.+++.+||+.||.+|||++|+++
T Consensus 258 ~i---~~~~~~~~---~~~~~~----~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 258 KV---EKGKYYFD---FNDWKN----ISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HH---HHCCCCCC---HHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HH---HcCCCCCC---ccccCC----CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 22 22111110 000011 1234788999999999999999999875
No 201
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.4e-40 Score=337.72 Aligned_cols=258 Identities=24% Similarity=0.326 Sum_probs=185.4
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC-CCcccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-HRNLLP 413 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~ 413 (633)
...+|++.+.||+|+||.||+|++. .+++.||+|++..... ...+.+.+|+.++.++. ||||++
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~--------------~~~~~~~~e~~~l~~l~~h~~iv~ 90 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDV-GSGREYALKRLLSNEE--------------EKNRAIIQEVCFMKKLSGHPNIVQ 90 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEET-TTCCEEEEEEEEESSH--------------HHHHHHHHHHHHHHHHTTSTTBCC
T ss_pred cCceEEEEEEEccCCceEEEEEEEC-CCCcEEEEEEecCCch--------------HHHHHHHHHHHHHHHhccCCChhh
Confidence 3468999999999999999999864 5789999998854321 11456888999999996 999999
Q ss_pred cceeee--------cCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeCCCC
Q 006739 414 LLAHMA--------RPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPR--IIHRDLK 483 (633)
Q Consensus 414 l~~~~~--------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~--ivH~Dik 483 (633)
+++++. .....++||||++ |+|.+++..... ...+++..++.++.|++.||+|| |+.+ |+|||||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~L---H~~~~~ivH~Dik 165 (337)
T 3ll6_A 91 FCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHM---HRQKPPIIHRDLK 165 (337)
T ss_dssp EEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHH---HTSSSCCBCCCCC
T ss_pred ccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHH---HhCCCCEEEccCC
Confidence 999984 3344789999995 799999876443 45699999999999999999999 5667 9999999
Q ss_pred CCCeEecCCCceEEcccccccccCCCCCcc----------eecccccCccccccccc---ccCCCCCccchHHHHHHHHH
Q 006739 484 PANVLLDDDMEARIADFGLAKAMPDAQTHI----------TTSNVAGTVGYIAPEYH---QTLKFTDKCDIYSFGVLLAV 550 (633)
Q Consensus 484 p~Nill~~~~~~kl~DfG~a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~s~G~~l~e 550 (633)
|+||+++.++.+||+|||+++......... ......||+.|+|||++ .+..++.++|||||||++||
T Consensus 166 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~e 245 (337)
T 3ll6_A 166 VENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYL 245 (337)
T ss_dssp GGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHH
T ss_pred cccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHH
Confidence 999999999999999999998765432211 11134589999999998 56678899999999999999
Q ss_pred HHhCCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHh
Q 006739 551 LVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQ 630 (633)
Q Consensus 551 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~ 630 (633)
|++|+.||...... . ........ .... .. ...+.+++..||+.||++|||+.|+++.|++
T Consensus 246 l~~g~~p~~~~~~~----~---~~~~~~~~-~~~~--------~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 305 (337)
T 3ll6_A 246 LCFRQHPFEDGAKL----R---IVNGKYSI-PPHD--------TQ----YTVFHSLIRAMLQVNPEERLSIAEVVHQLQE 305 (337)
T ss_dssp HHHSSCCC-------------------CCC-CTTC--------CS----SGGGHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHhCCCCCcchhHH----H---hhcCcccC-Cccc--------cc----chHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 99999998653211 1 11111100 0000 00 1126788999999999999999999999987
Q ss_pred hh
Q 006739 631 IR 632 (633)
Q Consensus 631 ~~ 632 (633)
+.
T Consensus 306 ~~ 307 (337)
T 3ll6_A 306 IA 307 (337)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 202
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.6e-39 Score=350.97 Aligned_cols=254 Identities=26% Similarity=0.403 Sum_probs=203.1
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.+.|++.+.||+|+||.||+|+.. .+|+.||||++......... ....+.+|+.++++++||||++++
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~-----------~~~~~~~E~~~l~~l~hpniv~~~ 92 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQKT-----------DKESLLREVQLLKQLDHPNIMKLY 92 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTCCBSS-----------CHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred cCceEEeeEEecCCCEEEEEEEEC-CCCCEEEEEEEEhhhcccch-----------HHHHHHHHHHHHHhCCCCCCCcEE
Confidence 467899999999999999999864 57899999998654322111 045688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe---cCC
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL---DDD 492 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill---~~~ 492 (633)
+++.+.+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|| |+.+|+||||||+||++ +.+
T Consensus 93 ~~~~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~ 165 (484)
T 3nyv_A 93 EFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYM---HKNKIVHRDLKPENLLLESKSKD 165 (484)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESSSSTT
T ss_pred EEEEeCCEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEEecCCCC
Confidence 999999999999999999999998875 35699999999999999999999 67899999999999999 567
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+.+||+|||+++........ ....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... ...+..
T Consensus 166 ~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~ 237 (484)
T 3nyv_A 166 ANIRIIDFGLSTHFEASKKM---KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN----EYDILK 237 (484)
T ss_dssp CCEEECCTTHHHHBCCCCSH---HHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHH
T ss_pred CcEEEEeeeeeEEccccccc---ccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC----HHHHHH
Confidence 89999999999887654322 33579999999999876 69999999999999999999999997532 222222
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+.. ....... + .+......+.+++.+||+.||.+|||+.|+++
T Consensus 238 ~i~~---~~~~~~~--~-----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 238 KVEK---GKYTFEL--P-----QWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HHHH---CCCCCCS--G-----GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHc---CCCCCCC--c-----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 2221 1111100 0 00111234778999999999999999999975
No 203
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2e-39 Score=323.67 Aligned_cols=250 Identities=28% Similarity=0.404 Sum_probs=193.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+|+.||+|++..... ......+.+.+|+.+++.++||||++++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~-----------~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 77 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQ-LTGHKVAVKILNRQKI-----------RSLDVVGKIKREIQNLKLFRHPHIIKLY 77 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHH-----------HHTTCHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred eccEEEEeeecCCCCeEEEEEEEC-CCCceEEEEEeccccc-----------cchhHHHHHHHHHHHHhcCCCCCEeEEE
Confidence 468999999999999999999874 4789999999843210 0011245788999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCce
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEA 495 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~ 495 (633)
+++...+..++||||+++++|.+++... ..+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+
T Consensus 78 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~ 150 (276)
T 2h6d_A 78 QVISTPTDFFMVMEYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYC---HRHMVVHRDLKPENVLLDAHMNA 150 (276)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHH---HHHCSSCCCCCGGGEEECTTSCE
T ss_pred EEEecCCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCChhhEEECCCCCE
Confidence 9999999999999999999999999763 4589999999999999999999 56789999999999999999999
Q ss_pred EEcccccccccCCCCCcceecccccCcccccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHH
Q 006739 496 RIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKF-TDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWM 574 (633)
Q Consensus 496 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 574 (633)
||+|||++......... ....||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||.... .....+.+
T Consensus 151 ~l~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~~~~~~~ 223 (276)
T 2h6d_A 151 KIADFGLSNMMSDGEFL---RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH----VPTLFKKI 223 (276)
T ss_dssp EECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHH
T ss_pred EEeecccccccCCCcce---ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHh
Confidence 99999999876553321 23568999999999988765 579999999999999999999986532 11222211
Q ss_pred HHhhccCC-cchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 575 RNVMTSEN-PTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 575 ~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
. .... .... ....+.+++.+||+.||++|||+.|+++
T Consensus 224 ~---~~~~~~~~~------------~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 224 R---GGVFYIPEY------------LNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp H---HCCCCCCTT------------SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred h---cCcccCchh------------cCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1 1111 1111 1123778899999999999999999987
No 204
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.5e-39 Score=335.78 Aligned_cols=259 Identities=25% Similarity=0.379 Sum_probs=182.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|+..+.||+|+||.||+|... .+|+.||||++....... ...+.+.+|+++++.++||||++++
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hpnIv~~~ 94 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDT-KTGLRVAVKKLSRPFQSI------------IHAKRTYRELRLLKHMKHENVIGLL 94 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEET-TTTEEEEEEECSSTTSSH------------HHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred CCceEEeeEEeecCCeEEEEEEEC-CCCCEEEEEEeCccccCH------------HHHHHHHHHHHHHHhCCCCCCCcEE
Confidence 478999999999999999999864 578999999986543211 1145678999999999999999999
Q ss_pred eeeecC------CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 416 AHMARP------DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 416 ~~~~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++... ...++|+||+ +++|.+++.. ..+++..+..++.||++||+|| |+.+|+||||||+||++
T Consensus 95 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll 165 (367)
T 2fst_X 95 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYI---HSADIIHRDLKPSNLAV 165 (367)
T ss_dssp EEECSCSSGGGCCCCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEE
T ss_pred EEEecCCccccCCeEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHhhEEE
Confidence 998654 5679999999 7899998863 4699999999999999999999 67899999999999999
Q ss_pred cCCCceEEcccccccccCCCCCcceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 490 DDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 490 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
+.++.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+... .
T Consensus 166 ~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~ 236 (367)
T 2fst_X 166 NEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----I 236 (367)
T ss_dssp CTTCCEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH----H
T ss_pred CCCCCEEEeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----H
Confidence 99999999999999875432 234578999999999877 6789999999999999999999999975322 1
Q ss_pred hHHHHHHHhhccCCcchhhh-----------hhhh-------hcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTRAID-----------AKLL-------ENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d-----------~~~~-------~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.....+....+... .+.+. ..+. ..........+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~l~~i~~~~g~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 237 DQLKLILRLVGTPG-AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHHHHHHHCSCC-HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHhCCCC-HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 22222222211110 00000 0000 0000011234788999999999999999999975
No 205
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=336.36 Aligned_cols=261 Identities=24% Similarity=0.335 Sum_probs=198.0
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|++.+.||+|+||.||+|.+. ..+|+|++......... .+.+.+|+.++++++||||+
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~----~~~avk~~~~~~~~~~~------------~~~~~~e~~~l~~l~h~~iv 92 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWH----GEVAIRLIDIERDNEDQ------------LKAFKREVMAYRQTRHENVV 92 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEES----SSEEEEECCCCSCCCCC------------CCCCCTTGGGGTTCCCTTBC
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEc----CeEEEEEeecCCCCHHH------------HHHHHHHHHHHhcCCCCCEe
Confidence 334578999999999999999999863 24999998754322111 23567899999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++.+.+..++||||+++++|.+++.. ....+++..++.++.|+++||+|| |+.+|+||||||+||+++ +
T Consensus 93 ~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~l---H~~~i~H~dlkp~NIl~~-~ 165 (319)
T 2y4i_B 93 LFMGACMSPPHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYL---HAKGILHKDLKSKNVFYD-N 165 (319)
T ss_dssp CCCEEEECSSCEEEECBCCCSEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHH---HHTTCCCCCCCSTTEEEC--
T ss_pred EEEEEEecCCceEEEeecccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccCCChhhEEEe-C
Confidence 999999999999999999999999999964 234689999999999999999999 677999999999999998 6
Q ss_pred CceEEcccccccccCCCCC---cceecccccCccccccccccc---------CCCCCccchHHHHHHHHHHHhCCCCCcc
Q 006739 493 MEARIADFGLAKAMPDAQT---HITTSNVAGTVGYIAPEYHQT---------LKFTDKCDIYSFGVLLAVLVMGRLPSDD 560 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~s~G~~l~elltg~~p~~~ 560 (633)
+.+||+|||+++....... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||..
T Consensus 166 ~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 245 (319)
T 2y4i_B 166 GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT 245 (319)
T ss_dssp -CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSS
T ss_pred CCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 7999999999876542211 111233468999999998864 3578899999999999999999999875
Q ss_pred cccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 561 FFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
... .... ........+. ... ... ...+.+++..||+.||++|||+.+++++|++++
T Consensus 246 ~~~----~~~~---~~~~~~~~~~-~~~-----~~~---~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 246 QPA----EAII---WQMGTGMKPN-LSQ-----IGM---GKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp CCH----HHHH---HHHHTTCCCC-CCC-----SSC---CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred CCH----HHHH---HHhccCCCCC-CCc-----CCC---CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 321 1111 1111111111 000 001 122778999999999999999999999999875
No 206
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=323.65 Aligned_cols=255 Identities=24% Similarity=0.350 Sum_probs=197.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|.....||+|+||.||+|... .+++.||+|.+...... ..+.+.+|+.+++.++||||++++
T Consensus 21 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~--------------~~~~~~~e~~~l~~l~h~~iv~~~ 85 (295)
T 2clq_A 21 YDENGDRVVLGKGTYGIVYAGRDL-SNQVRIAIKEIPERDSR--------------YSQPLHEEIALHKHLKHKNIVQYL 85 (295)
T ss_dssp BCTTSSBCEEEECSSSEEEEEEET-TTCCEEEEEEEECCCC-----------------HHHHHHHHHHHTCCCTTBCCEE
T ss_pred ccCCCCcEEEeecCcEEEEEEEEC-CCCeEEEEEEccCCchH--------------HHHHHHHHHHHHHhCCCCCEeeEe
Confidence 345666679999999999999864 57899999998654321 145688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC-CCc
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD-DME 494 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~-~~~ 494 (633)
+++...+..++||||+++++|.+++.... ....+++..+..++.|+++||+|| |+.+|+||||||+||+++. ++.
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~ 161 (295)
T 2clq_A 86 GSFSENGFIKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYL---HDNQIVHRDIKGDNVLINTYSGV 161 (295)
T ss_dssp EEEEETTEEEEEEECCSEEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTCC
T ss_pred eEEEeCCcEEEEEEeCCCCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHH---HhCCEEccCCChhhEEEECCCCC
Confidence 99999999999999999999999997632 234678999999999999999999 6789999999999999987 899
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCC--CCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLK--FTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+||+|||+++....... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||....... ...
T Consensus 162 ~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~-- 235 (295)
T 2clq_A 162 LKISDFGTSKRLAGINP--CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ--AAM-- 235 (295)
T ss_dssp EEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH--HHH--
T ss_pred EEEeecccccccCCCCC--cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh--HHH--
Confidence 99999999987654322 123457899999999987643 7889999999999999999999997532211 111
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.......... .+ +......+.+++.+||+.||++||++.|+++
T Consensus 236 -~~~~~~~~~~------~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 236 -FKVGMFKVHP------EI----PESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -HHHHHHCCCC------CC----CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -Hhhccccccc------cc----cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111111100 00 1111234778899999999999999999975
No 207
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.6e-39 Score=332.68 Aligned_cols=260 Identities=23% Similarity=0.308 Sum_probs=199.0
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|... .+++.||+|++...... ...+.+.+|++++.+++||||++++
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~ 91 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDN-LNKVRVAIKKISPFEHQ-------------TYCQRTLREIKILLRFRHENIIGIN 91 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCTTCH-------------HHHHHHHHHHHHHHHCCCTTBCCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEEC-CCCeEEEEEEeccccCc-------------HHHHHHHHHHHHHHhcCCCCCccce
Confidence 468999999999999999999864 57899999998643211 1145788999999999999999999
Q ss_pred eeeecC-----CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 416 AHMARP-----DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 416 ~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
+++... ...++||||++ |+|.+++.. ..+++..+..++.|++.||+|| |+.+|+||||||+||+++
T Consensus 92 ~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~ 162 (364)
T 3qyz_A 92 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT-----QHLSNDHICYFLYQILRGLKYI---HSANVLHRDLKPSNLLLN 162 (364)
T ss_dssp EEECCSSTTTCCCEEEEEECCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEC
T ss_pred eEEecCCccccceEEEEEcccC-cCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCChHhEEEC
Confidence 998654 36799999997 599998864 3589999999999999999999 678999999999999999
Q ss_pred CCCceEEcccccccccCCCCCcc-eecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 491 DDMEARIADFGLAKAMPDAQTHI-TTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
.++.+||+|||+++......... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......
T Consensus 163 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--- 239 (364)
T 3qyz_A 163 TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD--- 239 (364)
T ss_dssp TTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG---
T ss_pred CCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH---
Confidence 99999999999998765432211 1234579999999998654 458999999999999999999999997643222
Q ss_pred hHHHHHHHhhccCCcch---------------------hhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTR---------------------AIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~---------------------~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
....+........... .-..... +.....+.+++.+||+.||++|||+.|+++
T Consensus 240 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 240 -QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF----PNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp -HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHC----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -HHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhC----CCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2122211111111000 0000000 111234788999999999999999999975
No 208
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.5e-39 Score=328.65 Aligned_cols=266 Identities=24% Similarity=0.333 Sum_probs=199.5
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccce
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA 416 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 416 (633)
++|+..+.||+|+||.||+|+.. .+|+.||+|++....... .....+.+|+.++++++||||+++++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~i~~~~~ 69 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNK-LTGEVVALKKIRLDTETE------------GVPSTAIREISLLKELNHPNIVKLLD 69 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEC--------------------CCHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEc-CCCceEEEEEeecCccch------------hhHHHHHHHHHHHHHcCCCCeeeEEE
Confidence 57899999999999999999864 578999999985432110 11356788999999999999999999
Q ss_pred eeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceE
Q 006739 417 HMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEAR 496 (633)
Q Consensus 417 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~k 496 (633)
++...+..++||||++ ++|.+++.... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+|
T Consensus 70 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~k 143 (299)
T 2r3i_A 70 VIHTENKLYLVFEFLH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFC---HSHRVLHRDLKPQNLLINTEGAIK 143 (299)
T ss_dssp EEEETTEEEEEEECCS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEE
T ss_pred EEecCCceEEEEEccc-CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHeEEcCCCCEE
Confidence 9999999999999997 59999987532 34689999999999999999999 677999999999999999999999
Q ss_pred EcccccccccCCCCCcceecccccCcccccccccccCC-CCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHH
Q 006739 497 IADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLK-FTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMR 575 (633)
Q Consensus 497 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 575 (633)
|+|||++......... .....||+.|+|||.+.+.. ++.++||||||+++|||++|+.||..... ...+....+
T Consensus 144 l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~---~~~~~~~~~ 218 (299)
T 2r3i_A 144 LADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE---IDQLFRIFR 218 (299)
T ss_dssp ECSTTHHHHHCCCSBC--TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHH
T ss_pred ECcchhhhhccCCccc--cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHHH
Confidence 9999999876543221 13356899999999988765 78999999999999999999999975322 112222222
Q ss_pred HhhccCCc--chh-----hhhhhhh-------cCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 576 NVMTSENP--TRA-----IDAKLLE-------NGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 576 ~~~~~~~~--~~~-----~d~~~~~-------~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
........ ... ..+.... ...+.....+.+++.+||+.||++|||+.|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 219 TLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp HHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11110000 000 0000000 000111234778999999999999999999986
No 209
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.2e-39 Score=361.05 Aligned_cols=247 Identities=25% Similarity=0.306 Sum_probs=199.4
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCcccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLP 413 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~ 413 (633)
..++|++.+.||+|+||.||+|+.. .+++.||||++.+... ........+..|..++..+ +||||++
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~-~~~~~vAvK~l~~~~~-----------~~~~~~~~~~~E~~~l~~~~~~~~i~~ 406 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERK-GTDELYAVKILKKDVV-----------IQDDDVECTMVEKRVLALPGKPPFLTQ 406 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEES-SSCCEEEEEEEEHHHH-----------HHTTTTHHHHHHHHHHTCTTCCTTBCC
T ss_pred cccceEEEEEEccCCCEEEEEEEEC-CCCcEEEEEEEecccc-----------ccHHHHHHHHHHHHHHHhccCCCeEEE
Confidence 3478999999999999999999875 5788999999853211 0111245677889999887 6999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++.+.+..|+||||+++|+|.+++... ..+++..+..++.||+.||+|| |+.+|+||||||+|||++.++
T Consensus 407 l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~L---H~~gIiHrDLKp~NILl~~~g 479 (674)
T 3pfq_A 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEG 479 (674)
T ss_dssp EEEECBCSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HHTSEECCCCCSTTEEECSSS
T ss_pred EEEEEEeCCEEEEEEeCcCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH---HhCCeEeccCChhhEEEcCCC
Confidence 999999999999999999999999999863 4599999999999999999999 678999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHH
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKW 573 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~ 573 (633)
.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+
T Consensus 480 ~ikL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~----~~~--- 550 (674)
T 3pfq_A 480 HIKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE----DEL--- 550 (674)
T ss_dssp CEEECCCTTCEECCCTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH---
T ss_pred cEEEeecceeeccccCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH----HHH---
Confidence 999999999986443322 22456899999999999999999999999999999999999999975321 222
Q ss_pred HHHhhccC-CcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCH
Q 006739 574 MRNVMTSE-NPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNS 621 (633)
Q Consensus 574 ~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 621 (633)
...+.... ..+.. ....+.+++..||+.||++||++
T Consensus 551 ~~~i~~~~~~~p~~------------~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 551 FQSIMEHNVAYPKS------------MSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp HHHHHSSCCCCCTT------------SCHHHHHHHHHHSCSSSTTCTTC
T ss_pred HHHHHhCCCCCCcc------------CCHHHHHHHHHHccCCHHHCCCC
Confidence 22222221 11111 12237889999999999999998
No 210
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.5e-39 Score=342.91 Aligned_cols=199 Identities=25% Similarity=0.313 Sum_probs=168.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC------CCC
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI------RHR 409 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~ 409 (633)
..+|++.+.||+|+||.||+|... .+++.||||++..... ..+++.+|+++++.+ +|+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~-~~~~~vAvK~~~~~~~---------------~~~~~~~E~~~l~~l~~~~~~~~~ 159 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDH-KVHQHVALKMVRNEKR---------------FHRQAAEEIRILEHLRKQDKDNTM 159 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEET-TTTEEEEEEEECSCHH---------------HHHHHHHHHHHHHHHHTTCTTSCS
T ss_pred cCcEEEEEEcccCccEEEEEEEEC-CCCcEEEEEEECCccc---------------hHHHHHHHHHHHHHHhhccccCCc
Confidence 457999999999999999999865 5789999999854211 123455566666555 678
Q ss_pred cccccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 410 NLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 410 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
||+++++++......++||||++ ++|.+++.... ...+++..+..++.||++||+|| |+.+|+||||||+|||+
T Consensus 160 ~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlKp~NILl 233 (429)
T 3kvw_A 160 NVIHMLENFTFRNHICMTFELLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDAL---HKNRIIHCDLKPENILL 233 (429)
T ss_dssp CBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHH---HHHTEECSCCSGGGEEE
T ss_pred CEEEEEeecccCCeEEEEEeccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEE
Confidence 99999999999999999999995 69999987632 34589999999999999999999 56799999999999999
Q ss_pred cCCCc--eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCccc
Q 006739 490 DDDME--ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDF 561 (633)
Q Consensus 490 ~~~~~--~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~ 561 (633)
+.++. +||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 234 ~~~~~~~vkL~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 234 KQQGRSGIKVIDFGSSCYEHQRV-----YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp SSTTSCCEEECCCTTCEETTCCC-----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCCCcceEEeecccceecCCcc-----cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 99887 9999999997654432 2357899999999999999999999999999999999999998754
No 211
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=8.8e-39 Score=322.80 Aligned_cols=261 Identities=24% Similarity=0.361 Sum_probs=204.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC-CCccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-HRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l 414 (633)
.++|++.+.||+|+||.||+|... .+|+.||||++......... ........+.+.+|++++++++ ||||+++
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~-----~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~ 89 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHK-PTCKEYAVKIIDVTGGGSFS-----AEEVQELREATLKEVDILRKVSGHPNIIQL 89 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEETTCSTTCC-----HHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred hhccceeeeecCCCceEEEEEEEc-CcCceEEEEEEecccccccC-----HHHHHHHHHHHHHHHHHHHHhcCCCCEeee
Confidence 478999999999999999999874 57899999998655421111 1111233567889999999996 9999999
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++++......++||||+++++|.+++.. ...+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.
T Consensus 90 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~ 162 (298)
T 1phk_A 90 KDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICAL---HKLNIVHRDLKPENILLDDDMN 162 (298)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCC
T ss_pred eeeeccCCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEEcCCCc
Confidence 9999999999999999999999999975 34689999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccc------cCCCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQ------TLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
+||+|||++......... ....||+.|+|||++. ...++.++||||||+++|||++|+.||..... .
T Consensus 163 ~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~ 235 (298)
T 1phk_A 163 IKLTDFGFSCQLDPGEKL---REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ----M 235 (298)
T ss_dssp EEECCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----H
T ss_pred EEEecccchhhcCCCccc---ccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH----H
Confidence 999999999876554322 3356899999999885 45688999999999999999999999865321 1
Q ss_pred hHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.....+ ........ .+ ........+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~---~~~~~~~~--~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 236 LMLRMI---MSGNYQFG--SP-----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHH---HHTCCCCC--TT-----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHH---hcCCcccC--cc-----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 121111 11111100 00 00111234788999999999999999999975
No 212
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.4e-40 Score=336.08 Aligned_cols=256 Identities=19% Similarity=0.241 Sum_probs=197.7
Q ss_pred hcCcccc-cccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC-CCcccc
Q 006739 336 EDGLASL-EKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-HRNLLP 413 (633)
Q Consensus 336 ~~~~~~~-~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~ 413 (633)
.+.|.+. +.||+|+||.||+|+.. .+++.||+|++........ ....+.+|+.++.+++ ||||++
T Consensus 27 ~~~y~~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~------------~~~~~~~e~~~l~~l~~~~~iv~ 93 (327)
T 3lm5_A 27 NNFYILTSKELGRGKFAVVRQCISK-STGQEYAAKFLKKRRRGQD------------CRAEILHEIAVLELAKSCPRVIN 93 (327)
T ss_dssp HHHEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEESEETTEE------------CHHHHHHHHHHHHHTTTCTTBCC
T ss_pred hhEEeeccceeCCCCCeEEEEEEEC-CCCCEEEEEEEehhhcchH------------HHHHHHHHHHHHHhccCCCCEEE
Confidence 3456666 88999999999999864 5789999999865432211 1356788999999985 699999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC--
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD-- 491 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~-- 491 (633)
+++++.+.+..++||||+++|+|.+++... ....+++..++.++.|++.||+|| |+.+|+||||||+||+++.
T Consensus 94 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~L---H~~givH~Dikp~NIl~~~~~ 168 (327)
T 3lm5_A 94 LHEVYENTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYL---HQNNIVHLDLKPQNILLSSIY 168 (327)
T ss_dssp EEEEEECSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESCBT
T ss_pred EEEEEEeCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCcCChHHEEEecCC
Confidence 999999999999999999999999988542 246699999999999999999999 6789999999999999998
Q ss_pred -CCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchH
Q 006739 492 -DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSL 570 (633)
Q Consensus 492 -~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~ 570 (633)
++.+||+|||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ...
T Consensus 169 ~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~ 241 (327)
T 3lm5_A 169 PLGDIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN----QET 241 (327)
T ss_dssp TBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH
T ss_pred CCCcEEEeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHH
Confidence 78999999999987754332 1335799999999999999999999999999999999999999865322 111
Q ss_pred HHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 571 VKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 571 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
...+....... .. .........+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~i~~~~~~~-~~---------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 242 YLNISQVNVDY-SE---------ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHHHHTCCCC-CT---------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHhccccc-Cc---------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 11111111110 00 001112234778999999999999999999875
No 213
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.2e-39 Score=334.02 Aligned_cols=261 Identities=23% Similarity=0.309 Sum_probs=190.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|... .+++.||||++....... ...+.+.+|+.+++.++||||++++
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hpniv~~~ 90 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDA-ILERNVAIKKLSRPFQNQ------------THAKRAYRELVLMKCVNHKNIIGLL 90 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEECTTSSH------------HHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hhheeEeeeeEecCCEEEEEEEEC-CCCceEEEEEeccccCCh------------HHHHHHHHHHHHHHhcCCCCccceE
Confidence 468999999999999999999864 578999999986543211 1145678999999999999999999
Q ss_pred eeeecCC------ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 416 AHMARPD------CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 416 ~~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++...+ ..++||||+++ +|.+.+. ..+++..+..++.|++.||+|| |+.+|+||||||+||++
T Consensus 91 ~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~NIl~ 160 (371)
T 2xrw_A 91 NVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVV 160 (371)
T ss_dssp EEECSCCSTTTCCEEEEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEE
T ss_pred EeeccccccccccceEEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHH---HHCCeecccCCHHHEEE
Confidence 9997655 67999999975 7888775 2488999999999999999999 67899999999999999
Q ss_pred cCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccch
Q 006739 490 DDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMS 569 (633)
Q Consensus 490 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~ 569 (633)
+.++.+||+|||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..
T Consensus 161 ~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~ 234 (371)
T 2xrw_A 161 KSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI---DQ 234 (371)
T ss_dssp CTTSCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HH
T ss_pred cCCCCEEEEEeecccccccccc---cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH---HH
Confidence 9999999999999987654321 23457899999999999999999999999999999999999999753221 11
Q ss_pred HHHHHHHhhccC--------------------Cc-----chhhhhhhhhcC---CHHHHHHHHHHHhHhccCCCCCCCCH
Q 006739 570 LVKWMRNVMTSE--------------------NP-----TRAIDAKLLENG---YEEQMLLVLKIACFCTVDSPRERPNS 621 (633)
Q Consensus 570 ~~~~~~~~~~~~--------------------~~-----~~~~d~~~~~~~---~~~~~~~~~~l~~~cl~~dP~~RPs~ 621 (633)
+.+.+. ..... .. ............ .......+.+++.+||+.||++|||+
T Consensus 235 ~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~ 313 (371)
T 2xrw_A 235 WNKVIE-QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 313 (371)
T ss_dssp HHHHHC--CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCH
T ss_pred HHHHHH-HhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCH
Confidence 111110 00000 00 000000000000 11224568899999999999999999
Q ss_pred HHHHH
Q 006739 622 KDVRC 626 (633)
Q Consensus 622 ~ev~~ 626 (633)
+|+++
T Consensus 314 ~e~l~ 318 (371)
T 2xrw_A 314 DEALQ 318 (371)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 99986
No 214
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.6e-39 Score=330.42 Aligned_cols=260 Identities=25% Similarity=0.341 Sum_probs=196.2
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||||++.......... ........+.+|++++++++||||++++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 81 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFER-KTCKKVAIKIISKRKFAIGSA------READPALNVETEIEILKKLNHPCIIKIK 81 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECC---------------------CHHHHHHHHHHCCCTTBCCEE
T ss_pred hhceeEeeEEecCCCEEEEEEEEc-CCCcEEEEEEeehhhhhhccc------ccchhhhhHHHHHHHHHhCCCCCCceEe
Confidence 467999999999999999999865 578999999986543211100 0011234688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc-
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME- 494 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~- 494 (633)
+++...+ .++||||+++++|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.
T Consensus 82 ~~~~~~~-~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~ 153 (322)
T 2ycf_A 82 NFFDAED-YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPENVLLSSQEED 153 (322)
T ss_dssp EEEESSS-EEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSSS
T ss_pred eEEcCCc-eEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEecCCCC
Confidence 9987655 8999999999999998864 45689999999999999999999 6789999999999999987664
Q ss_pred --eEEcccccccccCCCCCcceecccccCcccccccccc---cCCCCCccchHHHHHHHHHHHhCCCCCcccccccccch
Q 006739 495 --ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQ---TLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMS 569 (633)
Q Consensus 495 --~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~ 569 (633)
+||+|||+++....... .....||+.|+|||++. ...++.++|||||||++|||++|+.||...... ..
T Consensus 154 ~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~ 227 (322)
T 2ycf_A 154 CLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ---VS 227 (322)
T ss_dssp CCEEECCCTTCEECCCCHH---HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS---SC
T ss_pred CeEEEccCccceecccccc---cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH---HH
Confidence 99999999987654321 12356899999999874 567889999999999999999999999754321 12
Q ss_pred HHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 570 LVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
+...+...... . .+...... ...+.+++.+||+.||++|||+.|+++
T Consensus 228 ~~~~~~~~~~~--~----~~~~~~~~----~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 228 LKDQITSGKYN--F----IPEVWAEV----SEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHHHHTCCC--C----CHHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHhCccc--c----Cchhhhhc----CHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 22222211100 0 01111111 234788999999999999999999974
No 215
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=327.31 Aligned_cols=255 Identities=22% Similarity=0.295 Sum_probs=197.3
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccce
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA 416 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 416 (633)
++|++.+.||+|+||.||++... .+++.||+|++...... ........+.+|++++++++||||+++++
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 73 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDS-ETLCRRAVKILKKKKLR----------RIPNGEANVKKEIQLLRRLRHKNVIQLVD 73 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBT-TTCCEEEEEEECHHHHH----------HSTTHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred cceeEeeEEecCCCeEEEEEEEC-CCCcEEEEEEecccccc----------ccchhHHHHHHHHHHHHhcCCCCeeEEEE
Confidence 67999999999999999999864 57899999998532110 00112567899999999999999999999
Q ss_pred eee--cCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCc
Q 006739 417 HMA--RPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDME 494 (633)
Q Consensus 417 ~~~--~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~ 494 (633)
++. +....++||||++++ |.+++.... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~L---H~~~i~H~dlkp~NIl~~~~~~ 147 (305)
T 2wtk_C 74 VLYNEEKQKMYMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYL---HSQGIVHKDIKPGNLLLTTGGT 147 (305)
T ss_dssp EEECC---CEEEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCC
T ss_pred EEEcCCCCeEEEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCcccEEEcCCCc
Confidence 984 456789999999876 777776532 45799999999999999999999 6789999999999999999999
Q ss_pred eEEcccccccccCCCCCcceecccccCcccccccccccCCC--CCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 495 ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKF--TDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 495 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+||+|||++................||+.|+|||++.+... +.++||||||+++|||++|+.||.... ....
T Consensus 148 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~-- 221 (305)
T 2wtk_C 148 LKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN----IYKL-- 221 (305)
T ss_dssp EEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS----HHHH--
T ss_pred EEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch----HHHH--
Confidence 99999999987765433333345679999999999876443 679999999999999999999987532 1111
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.......... .... ....+.+++.+||+.||++|||++|+++
T Consensus 222 -~~~i~~~~~~-------~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 222 -FENIGKGSYA-------IPGD----CGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp -HHHHHHCCCC-------CCSS----SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -HHHHhcCCCC-------CCCc----cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2211111110 0011 1223778899999999999999999986
No 216
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.8e-39 Score=328.45 Aligned_cols=255 Identities=23% Similarity=0.366 Sum_probs=196.6
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
+..+.|++.+.||+|+||.||+|+.. .+++.||+|++...... ..+.+.+|+++++.++||||++
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~ 80 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNK-ETGALAAAKVIETKSEE--------------ELEDYIVEIEILATCDHPYIVK 80 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEET-TTCCEEEEEEEC----C--------------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCccceeecceeccCCCeEEEEEEEc-CCCcEEEEEEecCCCHH--------------HHHHHHHHHHHHhcCCCCCEee
Confidence 34578999999999999999999875 46899999998543211 1457888999999999999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM 493 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~ 493 (633)
+++++...+..++||||+++++|.+++... ...+++..+..++.|+++||.|| |+.+|+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~ 154 (302)
T 2j7t_A 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFL---HSKRIIHRDLKAGNVLMTLEG 154 (302)
T ss_dssp EEEEEECC-CEEEEEECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTS
T ss_pred eeeeeeeCCeEEEEEEeCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHHHEEECCCC
Confidence 999999999999999999999999998753 34589999999999999999999 677999999999999999999
Q ss_pred ceEEcccccccccCCCCCcceecccccCccccccccc-----ccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 494 EARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYH-----QTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 494 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
.+||+|||++........ ......||+.|+|||++ .+..++.++||||||+++|||++|+.||..... .
T Consensus 155 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~ 228 (302)
T 2j7t_A 155 DIRLADFGVSAKNLKTLQ--KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP----M 228 (302)
T ss_dssp CEEECCCHHHHHHHHHHH--C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH----H
T ss_pred CEEEEECCCCcccccccc--ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH----H
Confidence 999999998764321110 11234689999999988 466789999999999999999999999875322 1
Q ss_pred hHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.................. . ....+.+++.+||+.||++|||+.++++
T Consensus 229 ---~~~~~~~~~~~~~~~~~~-----~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 229 ---RVLLKIAKSDPPTLLTPS-----K---WSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ---HHHHHHHHSCCCCCSSGG-----G---SCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ---HHHHHHhccCCcccCCcc-----c---cCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111111111111110010 1 1223778999999999999999999875
No 217
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=5.5e-39 Score=338.08 Aligned_cols=263 Identities=21% Similarity=0.225 Sum_probs=200.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC--------
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-------- 407 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-------- 407 (633)
.++|++.+.||+|+||.||+|+.. .+++.||||++.... ...+.+.+|+++++.++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------~~~~~~~~E~~~l~~l~~~~~~~~~ 99 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDI-QGKKFVAMKVVKSAE---------------HYTETALDEIRLLKSVRNSDPNDPN 99 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSCH---------------HHHHHHHHHHHHHHHHHHSCTTCGG
T ss_pred CCeEEEEEEeeecCCeeEEEEEec-CCCeEEEEEEEecCC---------------cchHHHHHHHHHHHHHhhcCCCCCC
Confidence 367999999999999999999864 578999999985321 11456778898888885
Q ss_pred CCcccccceeee----cCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeeeCCC
Q 006739 408 HRNLLPLLAHMA----RPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNP-RIIHRDL 482 (633)
Q Consensus 408 h~niv~l~~~~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~-~ivH~Di 482 (633)
|+||+++++++. .....++||||+ +++|.+.+... ....+++..++.++.||++||+|| |++ +|+||||
T Consensus 100 ~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~l---H~~~givHrDi 173 (397)
T 1wak_A 100 REMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYL---HTKCRIIHTDI 173 (397)
T ss_dssp GGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHH---HHTTCEECCCC
T ss_pred cceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHH---HHhCCEecCCC
Confidence 788999999987 556789999999 56676666542 235699999999999999999999 566 9999999
Q ss_pred CCCCeEecCCC-------------------------------------------------ceEEcccccccccCCCCCcc
Q 006739 483 KPANVLLDDDM-------------------------------------------------EARIADFGLAKAMPDAQTHI 513 (633)
Q Consensus 483 kp~Nill~~~~-------------------------------------------------~~kl~DfG~a~~~~~~~~~~ 513 (633)
||+|||++.++ .+||+|||+++......
T Consensus 174 kp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~--- 250 (397)
T 1wak_A 174 KPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF--- 250 (397)
T ss_dssp SGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS---
T ss_pred CHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC---
Confidence 99999999775 79999999998765432
Q ss_pred eecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccc--cchHHHHHHHhhccCCcchhhhh--
Q 006739 514 TTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTE--EMSLVKWMRNVMTSENPTRAIDA-- 589 (633)
Q Consensus 514 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~-- 589 (633)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......+....... +...+..
T Consensus 251 --~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~ 327 (397)
T 1wak_A 251 --TEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKV-PRKLIVAGK 327 (397)
T ss_dssp --CSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSC-CHHHHHHCT
T ss_pred --ccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCC-ChHHhhccc
Confidence 335789999999999999999999999999999999999999976433221 111222222222111 1110000
Q ss_pred -------------------------hh--hhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 590 -------------------------KL--LENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 590 -------------------------~~--~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+ ...........+.+++.+||+.||++|||++|+++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 328 YSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp TGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00 01224556677899999999999999999999985
No 218
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.2e-38 Score=331.92 Aligned_cols=258 Identities=24% Similarity=0.331 Sum_probs=194.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|...+.||+|+||.||+|... .+|+.||+|++....... ...+.+.+|+.+++.++||||++++
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~niv~~~ 107 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDK-RSGEKVAIKKLSRPFQSE------------IFAKRAYRELLLLKHMQHENVIGLL 107 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSTTSSH------------HHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred cccEEEEeEEecCCCeEEEEEEEC-CCCCEEEEEEecccccch------------hHHHHHHHHHHHHHhcCCCCchhhh
Confidence 468999999999999999999864 579999999986543221 1146788999999999999999999
Q ss_pred eeeecCCcc------EEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 416 AHMARPDCH------LLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 416 ~~~~~~~~~------~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++...+.. ++||||++ ++|.+++. ..+++..+..++.|++.||+|| |+.+|+||||||+||++
T Consensus 108 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIll 177 (371)
T 4exu_A 108 DVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYI---HSAGVVHRDLKPGNLAV 177 (371)
T ss_dssp EEECSCSSSTTCCCCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEE
T ss_pred hheeccCCcccceeEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCcCHHHeEE
Confidence 999877655 99999997 58888763 3489999999999999999999 67799999999999999
Q ss_pred cCCCceEEcccccccccCCCCCcceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 490 DDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 490 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
+.++.+||+|||+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .
T Consensus 178 ~~~~~~kL~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~ 249 (371)
T 4exu_A 178 NEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL---D 249 (371)
T ss_dssp CTTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH---H
T ss_pred CCCCCEEEEecCcccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH---H
Confidence 99999999999999865432 234578999999999887 77899999999999999999999999753221 1
Q ss_pred hHHHHHHHhhccCCcchhhh-----------hhhhh-------cCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTRAID-----------AKLLE-------NGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d-----------~~~~~-------~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+..... ..... ..+... ..+.. ...+.....+.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~i~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 250 QLTQILK-VTGVP-GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHHHH-HHCCC-CHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHH-HhCCC-cHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 1111111 11100 000000 00000 000111245788999999999999999999975
No 219
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.9e-39 Score=333.22 Aligned_cols=268 Identities=20% Similarity=0.263 Sum_probs=189.7
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|++.+.||+|+||.||+|+.. .+|+.||||++...... ...+.+|++.+..++||||+
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~---------------~~~~~~~~~~l~~l~h~niv 82 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEK-STGMSVAIKKVIQDPRF---------------RNRELQIMQDLAVLHHPNIV 82 (360)
T ss_dssp HHHHTTEEEC----------CEEEEET-TTCCEEEEEEEECCTTC---------------CCHHHHHHHHHHHHCCTTBC
T ss_pred hhhccceEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEecCccc---------------cHHHHHHHHHHHhcCCCCcc
Confidence 445689999999999999999999874 57899999988654321 12345677778888999999
Q ss_pred ccceeeecCCc-------cEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCC
Q 006739 413 PLLAHMARPDC-------HLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPA 485 (633)
Q Consensus 413 ~l~~~~~~~~~-------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~ 485 (633)
++++++..... .++||||+++ +|.+.+.........+++..+..++.|++.||.||| .|+.+|+||||||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~ 160 (360)
T 3e3p_A 83 QLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPH 160 (360)
T ss_dssp CEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGG
T ss_pred cHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHH
Confidence 99999865433 7899999976 666655544445677999999999999999999994 23999999999999
Q ss_pred CeEecC-CCceEEcccccccccCCCCCcceecccccCcccccccccccC-CCCCccchHHHHHHHHHHHhCCCCCccccc
Q 006739 486 NVLLDD-DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTL-KFTDKCDIYSFGVLLAVLVMGRLPSDDFFQ 563 (633)
Q Consensus 486 Nill~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~ 563 (633)
||+++. ++.+||+|||+++........ ....||+.|+|||++.+. .++.++|||||||++|||++|+.||.....
T Consensus 161 NIll~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 237 (360)
T 3e3p_A 161 NVLVNEADGTLKLCDFGSAKKLSPSEPN---VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS 237 (360)
T ss_dssp GEEEETTTTEEEECCCTTCBCCCTTSCC---CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEEeCCCCcEEEeeCCCceecCCCCCc---ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh
Confidence 999996 899999999999877654322 345789999999998664 489999999999999999999999976332
Q ss_pred ccccchHHHHHHHhhccCCcchhhh-------------------hhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHH
Q 006739 564 HTEEMSLVKWMRNVMTSENPTRAID-------------------AKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDV 624 (633)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~d-------------------~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev 624 (633)
. ..+...++. .... ....+. ..............+.+++.+||+.||++|||+.|+
T Consensus 238 ~---~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 312 (360)
T 3e3p_A 238 A---GQLHEIVRV-LGCP-SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEA 312 (360)
T ss_dssp H---HHHHHHHHH-HCCC-CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred H---HHHHHHHHH-cCCC-CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHH
Confidence 1 112222211 1100 000000 000111111134568899999999999999999999
Q ss_pred HH
Q 006739 625 RC 626 (633)
Q Consensus 625 ~~ 626 (633)
++
T Consensus 313 l~ 314 (360)
T 3e3p_A 313 LC 314 (360)
T ss_dssp TT
T ss_pred hc
Confidence 75
No 220
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=7.5e-39 Score=329.41 Aligned_cols=266 Identities=19% Similarity=0.300 Sum_probs=203.9
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCC------
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHR------ 409 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~------ 409 (633)
.++|++.+.||+|+||.||+|.....+++.||||++.... ...+.+.+|+++++.++|+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~e~~~l~~l~~~~~~~~~ 77 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD---------------RYCEAARSEIQVLEHLNTTDPNSTF 77 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH---------------HHHHHHHHHHHHHHHHHHHCTTCTT
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC---------------chhHHHHHHHHHHHHhhhcCCCCce
Confidence 3689999999999999999998755688999999985321 1134567788888777655
Q ss_pred cccccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 410 NLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 410 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++++++++...+..++||||+ +++|.+++.... ...+++..+..++.|+++||+|| |+.+|+||||||+||++
T Consensus 78 ~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~ 151 (339)
T 1z57_A 78 RCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFL---HSNKLTHTDLKPENILF 151 (339)
T ss_dssp CBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEE
T ss_pred eeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHEEE
Confidence 5999999999999999999999 889999997532 34689999999999999999999 67899999999999999
Q ss_pred cC-------------------CCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHH
Q 006739 490 DD-------------------DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAV 550 (633)
Q Consensus 490 ~~-------------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~e 550 (633)
+. ++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e 226 (339)
T 1z57_A 152 VQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIE 226 (339)
T ss_dssp SCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHH
T ss_pred eccccccccCCccccccccccCCCceEeeCcccccCcccc-----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHH
Confidence 87 6689999999998754432 34578999999999999999999999999999999
Q ss_pred HHhCCCCCcccccccccchHHHHHHHhhccCCcchhhhhh-------------------------------hhhcCCHHH
Q 006739 551 LVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAK-------------------------------LLENGYEEQ 599 (633)
Q Consensus 551 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-------------------------------~~~~~~~~~ 599 (633)
|++|+.||..... ......+...... .+....... .........
T Consensus 227 l~~g~~pf~~~~~----~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (339)
T 1z57_A 227 YYLGFTVFPTHDS----KEHLAMMERILGP-LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVE 301 (339)
T ss_dssp HHHSSCSCCCSCH----HHHHHHHHHHHCS-CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHH
T ss_pred HHhCCCCCCCCCh----HHHHHHHHHHhCC-CCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhh
Confidence 9999999975322 1122222222111 111000000 000112334
Q ss_pred HHHHHHHHhHhccCCCCCCCCHHHHHHH--HHhhh
Q 006739 600 MLLVLKIACFCTVDSPRERPNSKDVRCM--LSQIR 632 (633)
Q Consensus 600 ~~~~~~l~~~cl~~dP~~RPs~~ev~~~--l~~~~ 632 (633)
...+.+++.+||+.||++|||+.|+++. +++++
T Consensus 302 ~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 302 HERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK 336 (339)
T ss_dssp HHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred HHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence 5668899999999999999999999853 45443
No 221
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=329.12 Aligned_cols=255 Identities=25% Similarity=0.395 Sum_probs=194.1
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCcc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNL 411 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni 411 (633)
....+.|++.+.||+|+||.||+|++. .+++.||+|++...... ...+.+|+.+++++ +||||
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~---------------~~~~~~e~~~l~~l~~h~~i 83 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHV-KTGQLAAIKVMDVTGDE---------------EEEIKQEINMLKKYSHHRNI 83 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCSST---------------THHHHHHHHHHHHHCCSTTB
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEEC-CCCCeEEEEEEecCccc---------------HHHHHHHHHHHHhccCCCCe
Confidence 345678999999999999999999874 47899999998654321 34677899999998 79999
Q ss_pred cccceeeec------CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCC
Q 006739 412 LPLLAHMAR------PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPA 485 (633)
Q Consensus 412 v~l~~~~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~ 485 (633)
+++++++.. .+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|| |+.+|+||||||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~ 158 (326)
T 2x7f_A 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHL---HQHKVIHRDIKGQ 158 (326)
T ss_dssp CCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGG
T ss_pred eeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCcHH
Confidence 999999976 457899999999999999998632 35689999999999999999999 6779999999999
Q ss_pred CeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCcc
Q 006739 486 NVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQ-----TLKFTDKCDIYSFGVLLAVLVMGRLPSDD 560 (633)
Q Consensus 486 Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~elltg~~p~~~ 560 (633)
||+++.++.+||+|||++......... .....||+.|+|||++. +..++.++|||||||++|||++|+.||..
T Consensus 159 NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 236 (326)
T 2x7f_A 159 NVLLTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236 (326)
T ss_dssp GEEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred HEEEcCCCCEEEeeCcCceecCcCccc--cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999998876543211 13356899999999987 56789999999999999999999999865
Q ss_pred cccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 561 FFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
... ...... ....... ... .... ...+.+++.+||+.||++||++.++++
T Consensus 237 ~~~----~~~~~~---~~~~~~~-~~~-----~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 237 MHP----MRALFL---IPRNPAP-RLK-----SKKW---SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp SCH----HHHHHH---HHHSCCC-CCS-----CSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CcH----HHHHHH---hhcCccc-cCC-----cccc---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 321 111111 1111111 000 1111 124778889999999999999999986
No 222
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=8.9e-40 Score=342.82 Aligned_cols=260 Identities=22% Similarity=0.292 Sum_probs=192.2
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
..+|+..+.||+|+||.||+|++. .+..||+|++..... ...+|+++++.++||||++++
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~--~~~~~aikk~~~~~~------------------~~~~E~~il~~l~h~niv~l~ 98 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLV--ESDEVAIKKVLQDKR------------------FKNRELQIMRIVKHPNVVDLK 98 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEET--TTEEEEEEEEECCTT------------------SCCHHHHHHHTCCCTTBCCEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEEC--CCCeEEEEEEecCcc------------------hHHHHHHHHHhCCCCCcceEE
Confidence 457999999999999999999875 455699998854321 123689999999999999999
Q ss_pred eeeecCCc------cEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 416 AHMARPDC------HLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 416 ~~~~~~~~------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++..... .++||||++++ +.+.+.........+++..+..++.|+++||+|| |+.+|+||||||+|||+
T Consensus 99 ~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~Nill 174 (394)
T 4e7w_A 99 AFFYSNGDKKDEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI---HSIGICHRDIKPQNLLL 174 (394)
T ss_dssp EEEEEESSSSSCEEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEE
T ss_pred EEEEecCCCCCceEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHEEE
Confidence 99855433 78999999774 4444433333456799999999999999999999 67899999999999999
Q ss_pred c-CCCceEEcccccccccCCCCCcceecccccCcccccccccccC-CCCCccchHHHHHHHHHHHhCCCCCccccccccc
Q 006739 490 D-DDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTL-KFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEE 567 (633)
Q Consensus 490 ~-~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~ 567 (633)
+ .++.+||+|||+++........ ....||+.|+|||++.+. .++.++||||+||++|||++|+.||.+... .
T Consensus 175 ~~~~~~~kL~DFG~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---~ 248 (394)
T 4e7w_A 175 DPPSGVLKLIDFGSAKILIAGEPN---VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG---I 248 (394)
T ss_dssp ETTTTEEEECCCTTCEECCTTCCC---CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---H
T ss_pred cCCCCcEEEeeCCCcccccCCCCC---cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---H
Confidence 9 7999999999999877544322 345789999999998764 589999999999999999999999976432 1
Q ss_pred chHHHHHHHhhccCCcchh--hhhh-------------hhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 568 MSLVKWMRNVMTSENPTRA--IDAK-------------LLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~--~d~~-------------~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
..+.+.++. ......... .++. ............+.+++.+||+.||.+|||+.|+++
T Consensus 249 ~~l~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 249 DQLVEIIKV-LGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHHHHHHH-HCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHH-hCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 222222221 111000000 0000 000001112235888999999999999999999985
No 223
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.4e-39 Score=339.13 Aligned_cols=257 Identities=12% Similarity=0.071 Sum_probs=179.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHH---HHhhcCCCCccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEI---NTVGQIRHRNLL 412 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~niv 412 (633)
...|+..+.||+|+||.||+|++. .+|+.||||++........ ...+.+++|+ ..++. +||||+
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~-----------~~~~~~~~E~~~~~~l~~-~hp~iv 127 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDV-ERLEDFALKVFTMGAENSR-----------SELERLHEATFAAARLLG-ESPEEA 127 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEECCSTTHH-----------HHHHHHHHHHHHHHHHHC-------
T ss_pred ceeeeeeeeccCCCCEEEEEEEEC-CCCceeEEEEEEecccccc-----------cHHHHHHHHHHHHHHhcc-cChhhh
Confidence 345899999999999999999864 5789999999977543211 1144567774 45555 799988
Q ss_pred ccc-------eeeecC-----------------CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHH------HHHHHHH
Q 006739 413 PLL-------AHMARP-----------------DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLAR------HKIALGV 462 (633)
Q Consensus 413 ~l~-------~~~~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~i 462 (633)
+++ +++..+ ...++||||++ |+|.+++.... ..+++..+ ..++.||
T Consensus 128 ~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~vk~~i~~qi 203 (371)
T 3q60_A 128 RDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD---FVYVFRGDEGILALHILTAQL 203 (371)
T ss_dssp ----CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH---HSCCCCHHHHHHHHHHHHHHH
T ss_pred hhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc---cccchhhhhhhhhHHHHHHHH
Confidence 755 343322 23799999998 89999998642 23455556 7888999
Q ss_pred HHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCccccccccccc--CCCCCccc
Q 006739 463 ACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT--LKFTDKCD 540 (633)
Q Consensus 463 a~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D 540 (633)
++||+|| |+.+|+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|
T Consensus 204 ~~aL~~L---H~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~D 275 (371)
T 3q60_A 204 IRLAANL---QSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALN 275 (371)
T ss_dssp HHHHHHH---HHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHH
T ss_pred HHHHHHH---HHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCcccc
Confidence 9999999 6789999999999999999999999999999876432 123567799999999987 67999999
Q ss_pred hHHHHHHHHHHHhCCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCC
Q 006739 541 IYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPN 620 (633)
Q Consensus 541 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs 620 (633)
||||||++|||++|+.||.......... + ........................+.+++.+||+.||++|||
T Consensus 276 iwSlG~il~elltg~~Pf~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 346 (371)
T 3q60_A 276 AWQLGLSIYRVWCLFLPFGLVTPGIKGS----W-----KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLL 346 (371)
T ss_dssp HHHHHHHHHHHHHSSCSTTBCCTTCTTC----C-----CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCC
T ss_pred HHHHHHHHHHHHhCCCCCCCcCcccccc----h-----hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCC
Confidence 9999999999999999997653211000 0 000000000000000000112234788999999999999999
Q ss_pred HHHHHH
Q 006739 621 SKDVRC 626 (633)
Q Consensus 621 ~~ev~~ 626 (633)
+.|+++
T Consensus 347 ~~e~l~ 352 (371)
T 3q60_A 347 PLEAME 352 (371)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 999964
No 224
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.1e-39 Score=334.00 Aligned_cols=269 Identities=23% Similarity=0.331 Sum_probs=198.8
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC---CCC
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI---RHR 409 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~ 409 (633)
....++|++.+.||+|+||.||+|+....+|+.||+|++......... ...+.+|+.+++.+ +||
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~------------~~~~~~e~~~l~~l~~~~h~ 74 (326)
T 1blx_A 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM------------PLSTIREVAVLRHLETFEHP 74 (326)
T ss_dssp CCGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSC------------BCTHHHHHHHHHHHHHTCCT
T ss_pred cCchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccC------------CchhhHHHHHHHhhhccCCC
Confidence 345678999999999999999999875567899999998643321110 11344555555554 899
Q ss_pred cccccceeee-----cCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCC
Q 006739 410 NLLPLLAHMA-----RPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKP 484 (633)
Q Consensus 410 niv~l~~~~~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp 484 (633)
||+++++++. .....++||||++ |+|.+++.... ...+++..+..++.|+++||+|| |+.+|+||||||
T Consensus 75 ~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~gi~H~dlkp 148 (326)
T 1blx_A 75 NVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFL---HSHRVVHRDLKP 148 (326)
T ss_dssp TBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCG
T ss_pred CeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCCH
Confidence 9999999987 4567889999997 69999997632 34589999999999999999999 678999999999
Q ss_pred CCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccc
Q 006739 485 ANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQH 564 (633)
Q Consensus 485 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~ 564 (633)
+||+++.++.+||+|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 149 ~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 225 (326)
T 1blx_A 149 QNILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225 (326)
T ss_dssp GGEEECTTCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred HHeEEcCCCCEEEecCcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 99999999999999999998654322 123457899999999999999999999999999999999999999753221
Q ss_pred cccchHHHHHHHhhccC----Ccchh------hh---hhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 565 TEEMSLVKWMRNVMTSE----NPTRA------ID---AKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 565 ~~~~~~~~~~~~~~~~~----~~~~~------~d---~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
..+.+.+. ..... +.... .. ..............+.+++.+||+.||++|||+.|+++
T Consensus 226 ---~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 226 ---DQLGKILD-VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp ---HHHHHHHH-HHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHHHHHHH-HcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11112111 11100 00000 00 00000111112234778999999999999999999984
No 225
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.5e-39 Score=359.60 Aligned_cols=260 Identities=22% Similarity=0.334 Sum_probs=203.3
Q ss_pred hhhcCcccccccccccCeeEEEEEecC--CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPG--SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNL 411 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 411 (633)
...++|++.+.||+|+||.||+|.+.. ..+..||+|.+.....+ ...+.+.+|+.++++++||||
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~HpnI 453 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD-------------SVREKFLQEALTMRQFDHPHI 453 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCH-------------HHHHHHHHHHHHHHHCCCTTB
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCH-------------HHHHHHHHHHHHHHhCCCCCC
Confidence 345778999999999999999998743 23578999988643211 114678899999999999999
Q ss_pred cccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC
Q 006739 412 LPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD 491 (633)
Q Consensus 412 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~ 491 (633)
+++++++. .+..++||||+++|+|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+|||++.
T Consensus 454 v~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDikp~NILl~~ 526 (656)
T 2j0j_A 454 VKLIGVIT-ENPVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSS 526 (656)
T ss_dssp CCEEEEEC-SSSCEEEEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEE
T ss_pred CeEEEEEe-cCceEEEEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccchHhEEEeC
Confidence 99999985 45689999999999999999752 34689999999999999999999 6779999999999999999
Q ss_pred CCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcccccccccchH
Q 006739 492 DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQHTEEMSL 570 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~ 570 (633)
++.+||+|||+++......... .....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+... ...
T Consensus 527 ~~~vkL~DFG~a~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~----~~~ 601 (656)
T 2j0j_A 527 NDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----NDV 601 (656)
T ss_dssp TTEEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHH
T ss_pred CCCEEEEecCCCeecCCCccee-ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH----HHH
Confidence 9999999999998775543222 233457889999999998899999999999999999997 9999875322 222
Q ss_pred HHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhh
Q 006739 571 VKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQI 631 (633)
Q Consensus 571 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~ 631 (633)
...+. ...... . +......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 602 ~~~i~---~~~~~~------~----~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 602 IGRIE---NGERLP------M----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp HHHHH---HTCCCC------C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHH---cCCCCC------C----CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 22222 111111 0 011123477899999999999999999999999886
No 226
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=338.84 Aligned_cols=205 Identities=25% Similarity=0.337 Sum_probs=154.7
Q ss_pred cCccc-ccccccccCeeEEEEEecC-CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 337 DGLAS-LEKIGSGGCGEVYKAELPG-SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 337 ~~~~~-~~~ig~G~~g~Vy~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
+.|++ .++||+|+||.||+|++.. .+++.||+|++..... ...+.+|+.++++++||||+++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----------------~~~~~~E~~~l~~l~hpniv~~ 83 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----------------SMSACREIALLRELKHPNVISL 83 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----------------CHHHHHHHHHHHHCCCTTBCCC
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----------------CHHHHHHHHHHHhcCCCCeeeE
Confidence 44655 4689999999999998642 3678999999864432 2356789999999999999999
Q ss_pred ceeeec--CCccEEEEecccCCCHHHHHhhhcC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCe
Q 006739 415 LAHMAR--PDCHLLVYEFMKNGSLQDILNDVSQ-----GRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANV 487 (633)
Q Consensus 415 ~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Ni 487 (633)
++++.. ....++||||++ |+|.+++..... ....+++..++.++.||+.||+|| |+.+|+||||||+||
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivH~Dlkp~NI 159 (405)
T 3rgf_A 84 QKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL---HANWVLHRDLKPANI 159 (405)
T ss_dssp CEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGE
T ss_pred eeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH---HhCCEeCCCcCHHHe
Confidence 999954 667899999996 588887764321 123589999999999999999999 678899999999999
Q ss_pred Ee----cCCCceEEcccccccccCCCCCc-ceecccccCcccccccccccC-CCCCccchHHHHHHHHHHHhCCCCCccc
Q 006739 488 LL----DDDMEARIADFGLAKAMPDAQTH-ITTSNVAGTVGYIAPEYHQTL-KFTDKCDIYSFGVLLAVLVMGRLPSDDF 561 (633)
Q Consensus 488 ll----~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~ 561 (633)
|+ +.++.+||+|||+++........ .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 160 ll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 160 LVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 99 67889999999999877543221 122346799999999998874 4899999999999999999999999653
No 227
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.6e-38 Score=329.71 Aligned_cols=201 Identities=24% Similarity=0.307 Sum_probs=169.2
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC-CC-----
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-HR----- 409 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~----- 409 (633)
.++|++.+.||+|+||.||+|+.. .+++.||||++.... ....++.+|+++++.++ |+
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------~~~~~~~~e~~~l~~l~~~~~~~~~ 116 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDR-VEQEWVAIKIIKNKK---------------AFLNQAQIEVRLLELMNKHDTEMKY 116 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEET-TTTEEEEEEEECSSH---------------HHHHHHHHHHHHHHHHHHCSSGGGG
T ss_pred eeeEEEEEEEeecCCEEEEEEEEc-CCCcEEEEEEEeccH---------------HHHHHHHHHHHHHHHHHhcccccce
Confidence 478999999999999999999864 578999999985321 01345666777777664 44
Q ss_pred cccccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 410 NLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 410 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+|+++++++...+..++||||++ |+|.+++.... ...+++..+..++.|++.||.|||. |+.+|+||||||+|||+
T Consensus 117 ~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll 192 (382)
T 2vx3_A 117 YIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILL 192 (382)
T ss_dssp GBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEE
T ss_pred eEEEeeeeeccCCceEEEEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEE
Confidence 59999999999999999999995 59999997632 3458999999999999999999952 36899999999999999
Q ss_pred c--CCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCccc
Q 006739 490 D--DDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDF 561 (633)
Q Consensus 490 ~--~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~ 561 (633)
+ .++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 193 ~~~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 193 CNPKRSAIKIVDFGSSCQLGQRI-----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp SSTTSCCEEECCCTTCEETTCCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCCCcEEEEeccCceeccccc-----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 5 57789999999998775432 3457899999999999999999999999999999999999999753
No 228
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=9.2e-39 Score=325.03 Aligned_cols=254 Identities=23% Similarity=0.374 Sum_probs=192.6
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC--CCccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR--HRNLL 412 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv 412 (633)
..++|++.+.||+|+||.||++... +++.||||++....... ...+.+.+|++++.+++ |+||+
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~~~~~~iv 91 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEADN------------QTLDSYRNEIAYLNKLQQHSDKII 91 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECT--TCCEEEEEEEECSSCCH------------HHHHHHHHHHHHHHHHGGGCTTBC
T ss_pred ccceEEEEEEecCCCCEEEEEEEcC--CCcEEEEEEeccccccc------------cchHHHHHHHHHHHhccccCCceE
Confidence 4567999999999999999999874 68999999986543221 11567889999999997 59999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
++++++...+..++||| +.+++|.+++.. ...+++..+..++.|+++||+|| |+.+|+||||||+||++++
T Consensus 92 ~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~- 162 (313)
T 3cek_A 92 RLYDYEITDQYIYMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIVD- 162 (313)
T ss_dssp CEEEEEECSSEEEEEEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEET-
T ss_pred EEEEEeecCCEEEEEEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcccEEEEC-
Confidence 99999999999999999 558899999975 34689999999999999999999 6779999999999999975
Q ss_pred CceEEcccccccccCCCCCcceecccccCccccccccccc-----------CCCCCccchHHHHHHHHHHHhCCCCCccc
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-----------LKFTDKCDIYSFGVLLAVLVMGRLPSDDF 561 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~elltg~~p~~~~ 561 (633)
+.+||+|||+++...............||+.|+|||.+.+ ..++.++||||||+++|||++|+.||...
T Consensus 163 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (313)
T 3cek_A 163 GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242 (313)
T ss_dssp TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhH
Confidence 7999999999987755433222234578999999999875 46788999999999999999999999753
Q ss_pred ccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 562 FQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
... . ..+........... . .... ...+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~-----~-~~~~~~~~~~~~~~-----~-~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 243 INQ-----I-SKLHAIIDPNHEIE-----F-PDIP---EKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp CSH-----H-HHHHHHHCTTSCCC-----C-CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHH-----H-HHHHHHHhcccccC-----C-cccc---hHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 221 1 11111111111100 0 0011 234778899999999999999999986
No 229
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.7e-38 Score=318.90 Aligned_cols=253 Identities=24% Similarity=0.358 Sum_probs=199.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++........ ....+.+|++++++++||||++++
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~valK~~~~~~~~~~------------~~~~~~~e~~~l~~l~h~~i~~~~ 87 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDR-ITQQEYAVKVINKASAKNK------------DTSTILREVELLKKLDHPNIMKLF 87 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGBSSS------------CHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEc-CCCcEEEEEEecccccchH------------HHHHHHHHHHHHHhccCCCccEEE
Confidence 467999999999999999999864 4789999999854332111 145688999999999999999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC---
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD--- 492 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~--- 492 (633)
+++.+.+..++||||+++++|.+++... ..+++..++.++.|++.||+|| |+.+|+||||||+||+++.+
T Consensus 88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dl~p~NIlv~~~~~~ 160 (287)
T 2wei_A 88 EILEDSSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYM---HKHNIVHRDLKPENILLESKEKD 160 (287)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTT
T ss_pred EEEeCCCeEEEEEEccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCChhhEEEecCCCc
Confidence 9999999999999999999999988753 4589999999999999999999 67899999999999999754
Q ss_pred CceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHH
Q 006739 493 MEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVK 572 (633)
Q Consensus 493 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 572 (633)
+.+||+|||++......... ....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||..... ....+
T Consensus 161 ~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~ 232 (287)
T 2wei_A 161 CDIKIIDFGLSTCFQQNTKM---KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE----YDILK 232 (287)
T ss_dssp CCEEECSTTGGGTBCCCSSC---SCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH
T ss_pred ccEEEeccCcceeecCCCcc---ccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH----HHHHH
Confidence 46999999999876544321 23458999999998876 589999999999999999999999875321 12222
Q ss_pred HHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 573 WMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
........... ..... ....+.+++.+||+.||++|||+.|+++
T Consensus 233 ---~~~~~~~~~~~---~~~~~----~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 233 ---RVETGKYAFDL---PQWRT----ISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp ---HHHHCCCCCCS---GGGTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---HHHcCCCCCCc---hhhhh----cCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 22111111100 00011 1233778999999999999999999987
No 230
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.3e-38 Score=329.03 Aligned_cols=274 Identities=21% Similarity=0.249 Sum_probs=193.8
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
...++|++.+.||+|+||.||+|... +|+.||||++............. ......+.+.+|++++++++||||++
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 19 AMQSPYTVQRFISSGSYGAVCAGVDS--EGIPVAIKRVFNTVSDGRTVNIL---SDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HTTCSCEEEEEEEEETTEEEEEEECT--TSCEEEEEEECEECCTTSCEEGG---GSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HhccceEEeEEeccCCCEEEEEEECC--CCCeEEEEeccccCCccchhhhh---hhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 44689999999999999999999864 69999999986543322110000 00112467899999999999999999
Q ss_pred cceeeec-----CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeE
Q 006739 414 LLAHMAR-----PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVL 488 (633)
Q Consensus 414 l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nil 488 (633)
+++++.. ....++||||++ |+|.+++.. ....+++..+..++.|+++||+|| |+.+|+||||||+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVL---HEAGVVHRDLHPGNIL 166 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEE
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHH---HHCcCEecCCChHHEE
Confidence 9999844 335799999997 588888764 245699999999999999999999 6779999999999999
Q ss_pred ecCCCceEEcccccccccCCCCCcceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCccccccccc
Q 006739 489 LDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEE 567 (633)
Q Consensus 489 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~ 567 (633)
++.++.+||+|||+++....... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--- 240 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY--- 240 (362)
T ss_dssp ECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---
T ss_pred EcCCCCEEEEecCcccccccccc---cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH---
Confidence 99999999999999986544322 234578999999999877 67899999999999999999999999753221
Q ss_pred chHHHHHHHhhccCCcchhh-----------hhhh-------hhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 568 MSLVKWMRNVMTSENPTRAI-----------DAKL-------LENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~-----------d~~~-------~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.....+............. .... .....+.....+.+++.+||+.||++|||+.|+++
T Consensus 241 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 241 -NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp -HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 1111111111111100000 0000 00000111234788999999999999999999985
No 231
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=7.5e-39 Score=331.51 Aligned_cols=264 Identities=21% Similarity=0.303 Sum_probs=196.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|+.. .+|+.||||++...... .....+.+|++++++++||||++++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~~~ 75 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHK-PTGEIVAIKKIEPFDKP-------------LFALRTLREIKILKHFKHENIITIF 75 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCCSSH-------------HHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccceEEeeEEcCCCCeEEEEEEEC-CCCcEEEEEeecccccc-------------hHHHHHHHHHHHHHhCcCCCcCCee
Confidence 478999999999999999999874 57899999998543211 1145678899999999999999999
Q ss_pred eeeecC-----CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 416 AHMARP-----DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 416 ~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
+++... ...++||||++ ++|.+++.. ..+++..+..++.|+++||+|| |+.+|+||||||+||+++
T Consensus 76 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~Dlkp~Nil~~ 146 (353)
T 2b9h_A 76 NIQRPDSFENFNEVYIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVL---HGSNVIHRDLKPSNLLIN 146 (353)
T ss_dssp EECCCSCSTTCCCEEEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEC
T ss_pred eeecccccCccceEEEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEEc
Confidence 987654 67899999996 599998874 3589999999999999999999 678999999999999999
Q ss_pred CCCceEEcccccccccCCCCCcc--------eecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCccc
Q 006739 491 DDMEARIADFGLAKAMPDAQTHI--------TTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDF 561 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~ 561 (633)
.++.+||+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 147 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 147 SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp TTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999998775432111 1123568999999998754 67899999999999999999999999753
Q ss_pred ccccccchHHHHHHHhhccCCcchhh----hh-------hh-------hhcCCHHHHHHHHHHHhHhccCCCCCCCCHHH
Q 006739 562 FQHTEEMSLVKWMRNVMTSENPTRAI----DA-------KL-------LENGYEEQMLLVLKIACFCTVDSPRERPNSKD 623 (633)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~----d~-------~~-------~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~e 623 (633)
.. ......+............. .. .+ .....+.....+.+++.+||+.||++|||++|
T Consensus 227 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 302 (353)
T 2b9h_A 227 DY----RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKE 302 (353)
T ss_dssp SH----HHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred Cc----HHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHH
Confidence 21 11111111111111000000 00 00 00000112234778999999999999999999
Q ss_pred HHH
Q 006739 624 VRC 626 (633)
Q Consensus 624 v~~ 626 (633)
+++
T Consensus 303 ll~ 305 (353)
T 2b9h_A 303 ALE 305 (353)
T ss_dssp HHT
T ss_pred Hhc
Confidence 986
No 232
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2e-38 Score=330.87 Aligned_cols=262 Identities=21% Similarity=0.301 Sum_probs=197.2
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC--------
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-------- 407 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-------- 407 (633)
.++|++.+.||+|+||.||+|+.. .+++.||||++..... ....+.+|+.++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~---------------~~~~~~~e~~~l~~l~~~~~~~~~ 81 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDM-VNNTHVAMKIVRGDKV---------------YTEAAEDEIKLLQRVNDADNTKED 81 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSCHH---------------HHHHHHHHHHHHHHHHHTCCSHHH
T ss_pred CCeEEEEEeeeecCCeEEEEEEec-CCCcEEEEEEecCCcc---------------chhhhhHHHHHHHHhhcccccchh
Confidence 468999999999999999999864 5789999999853211 1345677888877775
Q ss_pred ---CCcccccceeeecCC----ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-Ceee
Q 006739 408 ---HRNLLPLLAHMARPD----CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNP-RIIH 479 (633)
Q Consensus 408 ---h~niv~l~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~-~ivH 479 (633)
||||+++++++...+ ..++||||+ +++|.+++.... ...+++..+..++.||+.||+|| |++ +|+|
T Consensus 82 ~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~l---H~~~~ivH 155 (373)
T 1q8y_A 82 SMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYM---HRRCGIIH 155 (373)
T ss_dssp HHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHH---HHTTCEEC
T ss_pred ccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHH---HhcCCEEe
Confidence 899999999987644 678999999 889999997633 34589999999999999999999 566 9999
Q ss_pred CCCCCCCeEec------CCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHh
Q 006739 480 RDLKPANVLLD------DDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVM 553 (633)
Q Consensus 480 ~Dikp~Nill~------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt 553 (633)
|||||+|||++ ..+.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 156 ~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 230 (373)
T 1q8y_A 156 TDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230 (373)
T ss_dssp SCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHH
T ss_pred cCCChHHeEEeccCCCcCcceEEEcccccccccCCCC-----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHh
Confidence 99999999994 44579999999998765432 33578999999999999999999999999999999999
Q ss_pred CCCCCcccccccc---cchHHHHHHHhhccCCcchhh---------------------------hhhh--hhcCCHHHHH
Q 006739 554 GRLPSDDFFQHTE---EMSLVKWMRNVMTSENPTRAI---------------------------DAKL--LENGYEEQML 601 (633)
Q Consensus 554 g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---------------------------d~~~--~~~~~~~~~~ 601 (633)
|+.||........ ...+.+.+ ..... .+.... ...+ ..........
T Consensus 231 g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (373)
T 1q8y_A 231 GDFLFEPDEGHSYTKDDDHIAQII-ELLGE-LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAK 308 (373)
T ss_dssp SSCCC---------CHHHHHHHHH-HHHCS-CCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHH
T ss_pred CCCCCCCCcccccCChHHHHHHHH-HhcCC-CCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHH
Confidence 9999975432211 11111111 11111 111000 0000 1123355667
Q ss_pred HHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 602 LVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 602 ~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.+.+++.+||+.||++|||++|+++
T Consensus 309 ~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 309 EISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred HHHHHHHHHhccCccccCCHHHHhh
Confidence 7899999999999999999999986
No 233
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.7e-38 Score=325.65 Aligned_cols=260 Identities=18% Similarity=0.273 Sum_probs=198.8
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCc-----
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRN----- 410 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n----- 410 (633)
.++|++.+.||+|+||.||+|.....+++.||+|++.... ...+.+.+|+.++++++|++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~E~~~l~~l~~~~~~~~~ 82 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG---------------KYREAARLEINVLKKIKEKDKENKF 82 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH---------------HHHHHHHHHHHHHHHHHHHCTTSCS
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc---------------cchhHHHHHHHHHHHHhhcCCCCce
Confidence 4689999999999999999998765555899999985321 11356777888888887665
Q ss_pred -ccccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 411 -LLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 411 -iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
++.+++++...+..++||||+ ++++.+++... ....+++..+..++.||++||+|| |+.+|+||||||+||++
T Consensus 83 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~l---H~~~ivH~Dlkp~NIll 156 (355)
T 2eu9_A 83 LCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFL---HENQLTHTDLKPENILF 156 (355)
T ss_dssp CBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEE
T ss_pred eEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEE
Confidence 899999999999999999999 66777777642 235689999999999999999999 68899999999999999
Q ss_pred -------------------cCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHH
Q 006739 490 -------------------DDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAV 550 (633)
Q Consensus 490 -------------------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~e 550 (633)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e 231 (355)
T 2eu9_A 157 VNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 231 (355)
T ss_dssp SCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred ecccccccccccccccccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHH
Confidence 567899999999998754432 33579999999999999999999999999999999
Q ss_pred HHhCCCCCcccccccccchHHHHHHHhhccCCcchhhhh---------------------hh----------hhcCCHHH
Q 006739 551 LVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDA---------------------KL----------LENGYEEQ 599 (633)
Q Consensus 551 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~---------------------~~----------~~~~~~~~ 599 (633)
|++|+.||..... ......+...... .+...... .. ........
T Consensus 232 l~~g~~pf~~~~~----~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (355)
T 2eu9_A 232 YYRGFTLFQTHEN----REHLVMMEKILGP-IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLE 306 (355)
T ss_dssp HHHSSCSCCCSSH----HHHHHHHHHHHCC-CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHH
T ss_pred HHhCCCCCCCCCH----HHHHHHHHHHcCC-CcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchh
Confidence 9999999975322 1222222222111 11100000 00 00111233
Q ss_pred HHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 600 MLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 600 ~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
...+.+++.+||+.||++|||+.|+++
T Consensus 307 ~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 307 HVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 456889999999999999999999974
No 234
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=326.05 Aligned_cols=258 Identities=23% Similarity=0.332 Sum_probs=193.9
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|...+.||+|+||.||+|+.. .+|+.||||++....... ...+.+.+|+.++++++||||++++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~~ 89 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDK-RSGEKVAIKKLSRPFQSE------------IFAKRAYRELLLLKHMQHENVIGLL 89 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEESSTTSSH------------HHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred CceEEEeeeEecCCCeEEEEEEEC-CCCCEEEEEEecccccch------------HHHHHHHHHHHHHHhcCCCCcccHh
Confidence 468999999999999999999864 579999999986543211 1145788999999999999999999
Q ss_pred eeeecCCc------cEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 416 AHMARPDC------HLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 416 ~~~~~~~~------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++..... .++||||++ ++|.+++. ..+++..+..++.||++||+|| |+.+|+||||||+||++
T Consensus 90 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~L---H~~~ivH~dlkp~NIl~ 159 (353)
T 3coi_A 90 DVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYI---HSAGVVHRDLKPGNLAV 159 (353)
T ss_dssp EEECSCSSGGGCCCCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEE
T ss_pred heEecccccccceeEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEeE
Confidence 99987654 499999997 58877763 3489999999999999999999 67799999999999999
Q ss_pred cCCCceEEcccccccccCCCCCcceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 490 DDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 490 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
+.++.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .
T Consensus 160 ~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----~ 230 (353)
T 3coi_A 160 NEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY----L 230 (353)
T ss_dssp CTTCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH----H
T ss_pred CCCCcEEEeecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----H
Confidence 99999999999999865432 133568999999999877 6789999999999999999999999975322 1
Q ss_pred hHHHHHHHhhccCCcchhhh-----------hhh-------hhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTRAID-----------AKL-------LENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d-----------~~~-------~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
.....+........ .+... ..+ .....+.....+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 231 DQLTQILKVTGVPG-TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHHHHHHHCBCC-HHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHHhCCCC-HHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11111111111000 00000 000 00011122345788999999999999999999975
No 235
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=322.35 Aligned_cols=263 Identities=22% Similarity=0.327 Sum_probs=189.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|... .+++.||+|++..... ...+++.+|++++++++||||++++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~--------------~~~~~~~~e~~~l~~l~h~~iv~~~ 74 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDN-DCDKRVAIKKIVLTDP--------------QSVKHALREIKIIRRLDHDNIVKVF 74 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEET-TTTEEEEEEEEECCSH--------------HHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CCceeEEEEeccCCCeEEEEEEEC-CCCeEEEEEEEecCCh--------------HHHHHHHHHHHHHHhcCCCCeeEEE
Confidence 468999999999999999999875 5689999999864321 1146788999999999999999999
Q ss_pred eeee--------------cCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCC
Q 006739 416 AHMA--------------RPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRD 481 (633)
Q Consensus 416 ~~~~--------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~D 481 (633)
+++. +....++||||++ |+|.+++.. ..+++..++.++.|+++||+|| |+.+|+|||
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~d 145 (320)
T 2i6l_A 75 EILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYI---HSANVLHRD 145 (320)
T ss_dssp EEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCC
T ss_pred EeccccccccccccccccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHH---HhCCEecCC
Confidence 8873 3467799999997 699999863 4689999999999999999999 678999999
Q ss_pred CCCCCeEec-CCCceEEcccccccccCCCCCc-ceecccccCccccccccccc-CCCCCccchHHHHHHHHHHHhCCCCC
Q 006739 482 LKPANVLLD-DDMEARIADFGLAKAMPDAQTH-ITTSNVAGTVGYIAPEYHQT-LKFTDKCDIYSFGVLLAVLVMGRLPS 558 (633)
Q Consensus 482 ikp~Nill~-~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~ 558 (633)
|||+||+++ +++.+||+|||+++........ .......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||
T Consensus 146 lkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf 225 (320)
T 2i6l_A 146 LKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225 (320)
T ss_dssp CSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCC
Confidence 999999997 5679999999999876543221 11233467999999998765 67899999999999999999999999
Q ss_pred cccccccccchHHHHHHHhhccC----------Ccchhhhhhhhh------cCCHHHHHHHHHHHhHhccCCCCCCCCHH
Q 006739 559 DDFFQHTEEMSLVKWMRNVMTSE----------NPTRAIDAKLLE------NGYEEQMLLVLKIACFCTVDSPRERPNSK 622 (633)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~d~~~~~------~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ 622 (633)
...... ......... .... .....+...... ...+.....+.+++.+||+.||++|||++
T Consensus 226 ~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 301 (320)
T 2i6l_A 226 AGAHEL---EQMQLILES-IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAE 301 (320)
T ss_dssp CCSSHH---HHHHHHHHH-SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred CCCCHH---HHHHHHHHh-cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHH
Confidence 754321 111111110 0000 000000000000 00011224478899999999999999999
Q ss_pred HHHH
Q 006739 623 DVRC 626 (633)
Q Consensus 623 ev~~ 626 (633)
|+++
T Consensus 302 ell~ 305 (320)
T 2i6l_A 302 EALS 305 (320)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9976
No 236
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.7e-38 Score=328.12 Aligned_cols=276 Identities=21% Similarity=0.294 Sum_probs=201.7
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhH---HHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTE---EDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
.++|++.+.||+|+||.||+|.. +++.||+|++............ ..........+.+.+|+.++++++||||+
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~ 106 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK---DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCL 106 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE---TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc---CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcc
Confidence 46899999999999999999987 7999999998532211000000 00000000026788999999999999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHH------HhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeeeCCCCCC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDI------LNDVSQGRRELDWLARHKIALGVACGLEYLHISHN-PRIIHRDLKPA 485 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~-~~ivH~Dikp~ 485 (633)
++++++.+.+..++||||+++|+|.++ +.. .....+++..++.++.|+++||+|| |+ .+|+||||||+
T Consensus 107 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~i~H~dl~p~ 181 (348)
T 2pml_X 107 TCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYI---HNEKNICHRDVKPS 181 (348)
T ss_dssp CCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHH---HHTSCEECCCCCGG
T ss_pred eEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHH---hccCCEeecCCChH
Confidence 999999999999999999999999998 432 1246799999999999999999999 55 89999999999
Q ss_pred CeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccC-CCCC-ccchHHHHHHHHHHHhCCCCCccccc
Q 006739 486 NVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTL-KFTD-KCDIYSFGVLLAVLVMGRLPSDDFFQ 563 (633)
Q Consensus 486 Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~s~G~~l~elltg~~p~~~~~~ 563 (633)
||+++.++.+||+|||.+...... ......||+.|+|||.+.+. .++. ++||||||+++|||++|+.||.....
T Consensus 182 Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 257 (348)
T 2pml_X 182 NILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS 257 (348)
T ss_dssp GEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred hEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 999999999999999999876443 22446799999999999887 5666 99999999999999999999975322
Q ss_pred ccccchHHHHHHHhhccCCcc--hhhhh---hhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 564 HTEEMSLVKWMRNVMTSENPT--RAIDA---KLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~--~~~d~---~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
. ....+.+.......... ..... .............+.+++.+||+.||.+|||+.|+++
T Consensus 258 ~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 258 L---VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp S---HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred H---HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1 22222221110000000 00000 0000000112234788999999999999999999986
No 237
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.2e-38 Score=325.27 Aligned_cols=253 Identities=21% Similarity=0.309 Sum_probs=169.4
Q ss_pred hcCccccc-ccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 006739 336 EDGLASLE-KIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~-~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 414 (633)
.++|.+.+ .||+|+||.||+|+.. .+|+.||+|++.... ....+....++.++||||+++
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~------------------~~~~e~~~~~~~~~h~~i~~~ 87 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHR-RTGQKCALKLLYDSP------------------KARQEVDHHWQASGGPHIVCI 87 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEESSH------------------HHHHHHHHHHHHTTSTTBCCE
T ss_pred cceeEecceeeeeCCCeEEEEEEEC-CCCCEEEEEEecCcH------------------HHHHHHHHHHHhcCCCChHHH
Confidence 46788855 6999999999999875 578999999985421 011112233456789999999
Q ss_pred ceeeec----CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 415 LAHMAR----PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 415 ~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
++++.. ....++||||+++|+|.+++... ....+++..++.++.|+++||+|| |+.+|+||||||+||+++
T Consensus 88 ~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~L---H~~~ivH~dlkp~NIll~ 162 (336)
T 3fhr_A 88 LDVYENMHHGKRCLLIIMECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFL---HSHNIAHRDVKPENLLYT 162 (336)
T ss_dssp EEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEES
T ss_pred HHHHhhccCCCceEEEEEeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEE
Confidence 999876 44578999999999999999753 235799999999999999999999 677999999999999998
Q ss_pred C---CCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCccccccccc
Q 006739 491 D---DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEE 567 (633)
Q Consensus 491 ~---~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~ 567 (633)
. ++.+||+|||+++....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 163 ~~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 238 (336)
T 3fhr_A 163 SKEKDAVLKLTDFGFAKETTQNAL----QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS 238 (336)
T ss_dssp CSSTTCCEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ecCCCceEEEeccccceecccccc----ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh
Confidence 6 45599999999987654321 2356899999999998888999999999999999999999999754322111
Q ss_pred chHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 568 MSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
......+...... .. ..........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 239 PGMKRRIRLGQYG--FP--------NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ------------C--CC--------TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhHHHhhhccccc--cC--------chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111111100000 00 0001112234778999999999999999999987
No 238
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.8e-38 Score=325.06 Aligned_cols=260 Identities=23% Similarity=0.378 Sum_probs=177.9
Q ss_pred hhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHH-HhhcCCCCccc
Q 006739 334 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEIN-TVGQIRHRNLL 412 (633)
Q Consensus 334 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv 412 (633)
...++|+..+.||+|+||.||+|... .+|+.||||++....... ...++..|+. +++.++||||+
T Consensus 19 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~-------------~~~~~~~e~~~~~~~~~h~niv 84 (327)
T 3aln_A 19 FTAEDLKDLGEIGRGAYGSVNKMVHK-PSGQIMAVKRIRSTVDEK-------------EQKQLLMDLDVVMRSSDCPYIV 84 (327)
T ss_dssp CCSCSEEC-CEEEECSSEEEEEEEET-TTTEEEEEEEEECCCCHH-------------HHHHHHHHHHHHHSSCCCTTBC
T ss_pred cCHHHhhehheeccCCCEEEEEEEEc-CCCCEEEEEEeecccCch-------------HHHHHHHHHHHHHHcCCCCcEe
Confidence 34578999999999999999999864 578999999986543210 1234444555 77888999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeeeCCCCCCCeEec
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVS-QGRRELDWLARHKIALGVACGLEYLHISHNP-RIIHRDLKPANVLLD 490 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~-~ivH~Dikp~Nill~ 490 (633)
++++++...+..++||||+++ +|.+++.... .....+++..+..++.|+++||.||| +. +|+||||||+||+++
T Consensus 85 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~ 160 (327)
T 3aln_A 85 QFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLD 160 (327)
T ss_dssp CEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEE
T ss_pred eeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEc
Confidence 999999999999999999975 8888776422 22567899999999999999999994 55 899999999999999
Q ss_pred CCCceEEcccccccccCCCCCcceecccccCccccccccc----ccCCCCCccchHHHHHHHHHHHhCCCCCcccccccc
Q 006739 491 DDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYH----QTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTE 566 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~ 566 (633)
.++.+||+|||+++....... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||.......
T Consensus 161 ~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~- 236 (327)
T 3aln_A 161 RSGNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF- 236 (327)
T ss_dssp TTTEEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----
T ss_pred CCCCEEEccCCCceecccccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-
Confidence 999999999999987654322 1234689999999998 45678999999999999999999999997532210
Q ss_pred cchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 567 EMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
+.+......... . +...........+.+++.+||+.||++|||+.|+++
T Consensus 237 -----~~~~~~~~~~~~-~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 237 -----DQLTQVVKGDPP-Q-----LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp --------CCCCCSCCC-C-----CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----HHHHHHhcCCCC-C-----CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 111111111100 0 000000111234788999999999999999999975
No 239
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.6e-38 Score=318.11 Aligned_cols=253 Identities=25% Similarity=0.418 Sum_probs=189.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|+..+.||+|+||.||+|+.. .+++.||+|++.... ...+.+.+|+.++++++||||++++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------~~~~~~~~E~~~l~~l~h~~i~~~~ 68 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNA-LDSRYYAIKKIRHTE---------------EKLSTILSEVMLLASLNHQYVVRYY 68 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEEEH---------------HHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred cccchhhheeccCCcEEEEEEEEc-CCCeEEEEEEEeccH---------------HHHHHHHHHHHHHHhcCchHHHHHH
Confidence 467899999999999999999864 578999999984311 1146788999999999999999999
Q ss_pred eeeec-------------CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCC
Q 006739 416 AHMAR-------------PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDL 482 (633)
Q Consensus 416 ~~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Di 482 (633)
+++.+ ....++||||+++|+|.+++... ...+++..++.++.|+++||+|| |+.+|+||||
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dl 142 (303)
T 1zy4_A 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYI---HSQGIIHRDL 142 (303)
T ss_dssp EEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHH---HHTTCCCSCC
T ss_pred HHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHH---HhCCeecccC
Confidence 98855 34578999999999999999752 35678899999999999999999 6779999999
Q ss_pred CCCCeEecCCCceEEcccccccccCCCCC------------cceecccccCcccccccccccC-CCCCccchHHHHHHHH
Q 006739 483 KPANVLLDDDMEARIADFGLAKAMPDAQT------------HITTSNVAGTVGYIAPEYHQTL-KFTDKCDIYSFGVLLA 549 (633)
Q Consensus 483 kp~Nill~~~~~~kl~DfG~a~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ 549 (633)
||+||+++.++.+||+|||+++....... ........||+.|+|||++.+. .++.++|||||||++|
T Consensus 143 kp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~ 222 (303)
T 1zy4_A 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222 (303)
T ss_dssp CGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHH
T ss_pred CHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHH
Confidence 99999999999999999999987653211 1112345689999999998764 6899999999999999
Q ss_pred HHHhCCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 550 VLVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 550 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
||++ ||.... ......+.+.... .... ..........+.+++.+||+.||.+|||+.++++
T Consensus 223 ~l~~---p~~~~~---~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 223 EMIY---PFSTGM---ERVNILKKLRSVS--IEFP--------PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHS---CCSSHH---HHHHHHHHHHSTT--CCCC--------TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHh---ccCCch---hHHHHHHhccccc--cccC--------ccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 9998 543211 1111222221110 0111 1111222334778999999999999999999986
No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.4e-38 Score=336.09 Aligned_cols=254 Identities=22% Similarity=0.340 Sum_probs=183.6
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCcccccc
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLPLL 415 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~ 415 (633)
+.|...+.||+|+||+||.+.. .+|+.||||++.... .+.+.+|++++.++ +||||++++
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~--~~g~~vAvK~~~~~~-----------------~~~~~~E~~~l~~l~~HpnIv~~~ 75 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGS--FQGRPVAVKRMLIDF-----------------CDIALMEIKLLTESDDHPNVIRYY 75 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEE--SSSSEEEEEEEEGGG-----------------HHHHHHHHHHHHHHTTSTTBCCEE
T ss_pred heeeccCeEeeCCCeEEEEEEE--ECCeEEEEEEEcHHH-----------------HHHHHHHHHHHHhccCCCCcCeEE
Confidence 3455678899999999976543 379999999884321 23467899999876 899999999
Q ss_pred eeeecCCccEEEEecccCCCHHHHHhhhcCCCCC---CCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCC
Q 006739 416 AHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRE---LDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDD 492 (633)
Q Consensus 416 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~ 492 (633)
+++.+.+..++||||++ |+|.+++......... .++..++.++.||+.||+|| |+.+|+||||||+|||++.+
T Consensus 76 ~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~ 151 (434)
T 2rio_A 76 CSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL---HSLKIIHRDLKPQNILVSTS 151 (434)
T ss_dssp EEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEECC
T ss_pred EEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEecC
Confidence 99999999999999995 6999999763322111 13345678999999999999 67899999999999999754
Q ss_pred -------------CceEEcccccccccCCCCCcc--eecccccCccccccccccc-------CCCCCccchHHHHHHHHH
Q 006739 493 -------------MEARIADFGLAKAMPDAQTHI--TTSNVAGTVGYIAPEYHQT-------LKFTDKCDIYSFGVLLAV 550 (633)
Q Consensus 493 -------------~~~kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~e 550 (633)
+.+||+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++||
T Consensus 152 ~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~e 231 (434)
T 2rio_A 152 SRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYY 231 (434)
T ss_dssp HHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHH
T ss_pred cccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHH
Confidence 489999999999876543221 1234579999999999875 568999999999999999
Q ss_pred HHh-CCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 551 LVM-GRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 551 llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
|++ |+.||...... ....+.......... ..........+.+++.+||+.||++|||+.|+++
T Consensus 232 llt~g~~Pf~~~~~~-----~~~i~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 232 ILSKGKHPFGDKYSR-----ESNIIRGIFSLDEMK--------CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHTTSCCTTCSTTTH-----HHHHHHTCCCCCCCT--------TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHhCCCCCCCCchhh-----HHHHhcCCCCccccc--------ccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 999 99999753221 112222111111110 1112334456889999999999999999999975
No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=321.11 Aligned_cols=247 Identities=20% Similarity=0.281 Sum_probs=189.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC----CCCcc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI----RHRNL 411 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l----~h~ni 411 (633)
.++|++.+.||+|+||.||+|+.. .+++.||+|++.......... ......+.+|+.++.++ +||||
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~--------~~~~~~~~~e~~~l~~l~~~~~h~~i 100 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRL-TDRLQVAIKVIPRNRVLGWSP--------LSDSVTCPLEVALLWKVGAGGGHPGV 100 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECT-TTCCEEEEEECCSTTTC----------------CCCCHHHHHHHHHHSSCCCSSB
T ss_pred hhceEEeeEEEcCCCEEEEEEEEc-cCCeEEEEEEEeccccccccc--------chhhHHHHHHHHHHHhhcccCCCCCe
Confidence 467999999999999999999764 578999999986543211100 01133456788888888 89999
Q ss_pred cccceeeecCCccEEEEec-ccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 412 LPLLAHMARPDCHLLVYEF-MKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 412 v~l~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
+++++++...+..++|||| +++++|.+++.. ...+++..++.++.|+++||+|| |+.+|+||||||+||+++
T Consensus 101 ~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~ 173 (312)
T 2iwi_A 101 IRLLDWFETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHC---HSRGVVHRDIKDENILID 173 (312)
T ss_dssp CCEEEEC-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHH---HHHTEECCCCSGGGEEEE
T ss_pred eeEEEEEecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChhhEEEe
Confidence 9999999999999999999 789999999976 24589999999999999999999 567999999999999999
Q ss_pred -CCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCC-CccchHHHHHHHHHHHhCCCCCcccccccccc
Q 006739 491 -DDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFT-DKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEM 568 (633)
Q Consensus 491 -~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 568 (633)
+++.+||+|||+++....... ....||..|+|||++.+..+. .++||||||+++|||++|+.||.....
T Consensus 174 ~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----- 244 (312)
T 2iwi_A 174 LRRGCAKLIDFGSGALLHDEPY----TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE----- 244 (312)
T ss_dssp TTTTEEEECCCSSCEECCSSCB----CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----
T ss_pred CCCCeEEEEEcchhhhcccCcc----cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-----
Confidence 889999999999987765322 345689999999998876664 489999999999999999999864211
Q ss_pred hHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 569 SLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
... ....... .....+.+++.+||+.||++|||++|+++
T Consensus 245 ----~~~---~~~~~~~------------~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 245 ----ILE---AELHFPA------------HVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ----HHH---TCCCCCT------------TSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----Hhh---hccCCcc------------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 0111111 11223778899999999999999999986
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=6.8e-38 Score=319.35 Aligned_cols=257 Identities=21% Similarity=0.381 Sum_probs=180.8
Q ss_pred hhhhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 006739 333 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLL 412 (633)
Q Consensus 333 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 412 (633)
....++|+..+.||+|+||.||+|+.. .+|+.||||++....... ...+.+.++..+++.++||||+
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~------------~~~~~~~~~~~~~~~~~h~~i~ 87 (318)
T 2dyl_A 21 QAEINDLENLGEMGSGTCGQVWKMRFR-KTGHVIAVKQMRRSGNKE------------ENKRILMDLDVVLKSHDCPYIV 87 (318)
T ss_dssp ECCGGGEEEEEEC------CEEEEEET-TTCCEEEEEEEETTSCHH------------HHHHHHHHHHHHHHTTTCTTBC
T ss_pred hhhhccccccceeeecCCeeEEEEEEe-cCCeEEEEEEecccccch------------HHHHHHHHHHHHHHhcCCCcee
Confidence 344578999999999999999999875 478999999986543211 1123445555678888999999
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeeeCCCCCCCeEecC
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHN-PRIIHRDLKPANVLLDD 491 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~-~~ivH~Dikp~Nill~~ 491 (633)
++++++.+.+..++||||+ ++.+..+.... ...+++..+..++.|+++||+||| + .+|+||||||+||+++.
T Consensus 88 ~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~ 160 (318)
T 2dyl_A 88 QCFGTFITNTDVFIAMELM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDE 160 (318)
T ss_dssp CEEEEEECSSEEEEEECCC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECT
T ss_pred eEEEEEecCCcEEEEEecc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECC
Confidence 9999999999999999999 55666665432 356899999999999999999995 4 38999999999999999
Q ss_pred CCceEEcccccccccCCCCCcceecccccCcccccccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCcccccccc
Q 006739 492 DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQ-----TLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTE 566 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~ 566 (633)
++.+||+|||++........ .....||+.|+|||++. ...++.++||||||+++|||++|+.||.....
T Consensus 161 ~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--- 234 (318)
T 2dyl_A 161 RGQIKLCDFGISGRLVDDKA---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT--- 234 (318)
T ss_dssp TSCEEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS---
T ss_pred CCCEEEEECCCchhccCCcc---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc---
Confidence 99999999999976654322 12356899999999984 45688999999999999999999999975321
Q ss_pred cchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 567 EMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
... .+............. ... ....+.+++.+||+.||.+||+++|+++
T Consensus 235 ~~~---~~~~~~~~~~~~~~~-----~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 235 DFE---VLTKVLQEEPPLLPG-----HMG---FSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHH---HHHHHHHSCCCCCCS-----SSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cHH---HHHHHhccCCCCCCc-----cCC---CCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 111 122222221111000 000 1123778889999999999999999975
No 243
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.3e-38 Score=324.82 Aligned_cols=247 Identities=23% Similarity=0.346 Sum_probs=196.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC--CCcccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR--HRNLLP 413 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~ 413 (633)
.++|++.+.||+|+||.||+|+.. .+++.||||++............ ....+.+|+.++++++ |+||++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~i~~ 112 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRV-SDNLPVAIKHVEKDRISDWGELP--------NGTRVPMEVVLLKKVSSGFSGVIR 112 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEET-TTTEEEEEEEEEGGGCCCEEECT--------TCCEEEHHHHHHHHHCSSSCSBCC
T ss_pred cCceEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEEecccchhhhhhh--------hhhHHHHHHHHHHhhccCCCCceE
Confidence 468999999999999999999864 57899999998654321100000 0234567888999886 599999
Q ss_pred cceeeecCCccEEEEecccC-CCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec-C
Q 006739 414 LLAHMARPDCHLLVYEFMKN-GSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD-D 491 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~-~ 491 (633)
+++++..++..++||||+.+ ++|.+++.. ...+++..++.++.|+++||+|| |+.+|+||||||+||+++ +
T Consensus 113 ~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~ 185 (320)
T 3a99_A 113 LLDWFERPDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHC---HNCGVLHRDIKDENILIDLN 185 (320)
T ss_dssp EEEEEECSSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETT
T ss_pred EEEEEecCCcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHH---HHCCcEeCCCCHHHEEEeCC
Confidence 99999999999999999986 899999976 34689999999999999999999 678999999999999999 7
Q ss_pred CCceEEcccccccccCCCCCcceecccccCcccccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcccccccccchH
Q 006739 492 DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKF-TDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSL 570 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~ 570 (633)
++.+||+|||+++....... ....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.....
T Consensus 186 ~~~~kL~Dfg~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------- 254 (320)
T 3a99_A 186 RGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------- 254 (320)
T ss_dssp TTEEEECCCTTCEECCSSCB----CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------
T ss_pred CCCEEEeeCccccccccccc----cCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------
Confidence 88999999999987764322 33569999999999887665 6789999999999999999999864211
Q ss_pred HHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 571 VKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 571 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
... ...... ... ...+.+++.+||+.||++|||++|+++
T Consensus 255 --~~~---~~~~~~---------~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 255 --IIR---GQVFFR---------QRV---SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp --HHH---CCCCCS---------SCC---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --hhc---cccccc---------ccC---CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 000000 011 123778999999999999999999986
No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=6.5e-38 Score=341.74 Aligned_cols=269 Identities=26% Similarity=0.336 Sum_probs=199.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|... .+|+.||||++...... ...+.+.+|++++++++||||++++
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~-~tg~~VAVKvi~~~~~~-------------~~~~~~~~Ei~iL~~L~HpnIV~l~ 78 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQ-DTGEQVAIKQCRQELSP-------------KNRERWCLEIQIMKKLNHPNVVSAR 78 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCT-TTTCCEEECCCCSCCCH-------------HHHHHHHHHHHHHHHCCBTTBCCEE
T ss_pred CCCeEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEecccCCH-------------HHHHHHHHHHHHHHhCCCCCCCcee
Confidence 368999999999999999999764 57899999998654211 1145788999999999999999999
Q ss_pred eeeec------CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 416 AHMAR------PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 416 ~~~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++.. .+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|| |+.+|+||||||+||++
T Consensus 79 ~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yL---Hs~gIVHrDLKP~NILl 154 (676)
T 3qa8_A 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYL---HENRIIHRDLKPENIVL 154 (676)
T ss_dssp ECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHH---HHTTBCCCCCCSTTEEE
T ss_pred eeecccccccCCCeEEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHeEe
Confidence 98755 667899999999999999998633 234688999999999999999999 67899999999999999
Q ss_pred cCCCc---eEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccc
Q 006739 490 DDDME---ARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTE 566 (633)
Q Consensus 490 ~~~~~---~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~ 566 (633)
+.++. +||+|||+++........ ....||+.|+|||.+.+..++.++|||||||++|||++|+.||......
T Consensus 155 ~~~g~~~~vKL~DFG~a~~~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-- 229 (676)
T 3qa8_A 155 QPGPQRLIHKIIDLGYAKELDQGELC---TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-- 229 (676)
T ss_dssp ECCSSSCEEEECSCCCCCBTTSCCCC---CCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH--
T ss_pred ecCCCceeEEEccccccccccccccc---ccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch--
Confidence 97765 899999999877654322 3457999999999999999999999999999999999999999653211
Q ss_pred cchHHHHHHHhhc--------cCCcchh--hhhh--hhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHH-----HHHHHH
Q 006739 567 EMSLVKWMRNVMT--------SENPTRA--IDAK--LLENGYEEQMLLVLKIACFCTVDSPRERPNSKD-----VRCMLS 629 (633)
Q Consensus 567 ~~~~~~~~~~~~~--------~~~~~~~--~d~~--~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~e-----v~~~l~ 629 (633)
..|...... ....... .... ............+.+++..||+.||++|||+.+ +.+.++
T Consensus 230 ----~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~ 305 (676)
T 3qa8_A 230 ----VQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALD 305 (676)
T ss_dssp ----HHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHH
T ss_pred ----hhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHH
Confidence 111110000 0000000 0000 001122334456889999999999999999988 455555
Q ss_pred hh
Q 006739 630 QI 631 (633)
Q Consensus 630 ~~ 631 (633)
++
T Consensus 306 ~i 307 (676)
T 3qa8_A 306 SI 307 (676)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.9e-38 Score=330.39 Aligned_cols=251 Identities=22% Similarity=0.328 Sum_probs=182.6
Q ss_pred hhcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCcccc
Q 006739 335 KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLP 413 (633)
Q Consensus 335 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~ 413 (633)
...+|...+.||+|+||+||.... .+++.||||++..... ..+.+|+++++++ +|||||+
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~--~~~~~vAvK~~~~~~~-----------------~~~~~E~~~l~~l~~HpnIv~ 82 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGM--FDNRDVAVKRILPECF-----------------SFADREVQLLRESDEHPNVIR 82 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEE--SSSSEEEEEEECTTTE-----------------EECHHHHHHHHHSCCCTTBCC
T ss_pred ccEEEecCCeeecCcCEEEEEEEE--eCCeEEEEEEECHHHH-----------------HHHHHHHHHHHhccCCCCcCe
Confidence 345688999999999999554333 3789999999864332 1245688899988 7999999
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC--
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD-- 491 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~-- 491 (633)
+++++.+....++||||++ |+|.+++.... ....+..+..++.||++||+|| |+.+|+||||||+||+++.
T Consensus 83 l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlKp~NIll~~~~ 155 (432)
T 3p23_A 83 YFCTEKDRQFQYIAIELCA-ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHL---HSLNIVHRDLKPHNILISMPN 155 (432)
T ss_dssp EEEEEEETTEEEEEEECCS-EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHH---HHTTCCCCCCSTTSEEECCCB
T ss_pred EEEEEecCCEEEEEEECCC-CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHH---HHCcCEeCCCCHHHEEEecCC
Confidence 9999999999999999996 59999997532 2344456678999999999999 6789999999999999953
Q ss_pred ---CCceEEcccccccccCCCCCc-ceecccccCcccccccccc---cCCCCCccchHHHHHHHHHHHh-CCCCCccccc
Q 006739 492 ---DMEARIADFGLAKAMPDAQTH-ITTSNVAGTVGYIAPEYHQ---TLKFTDKCDIYSFGVLLAVLVM-GRLPSDDFFQ 563 (633)
Q Consensus 492 ---~~~~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~ 563 (633)
...+||+|||+++........ .......||+.|+|||++. ...++.++|||||||++|||++ |..||.....
T Consensus 156 ~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~ 235 (432)
T 3p23_A 156 AHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ 235 (432)
T ss_dssp TTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT
T ss_pred CCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH
Confidence 335789999999877643221 1224467999999999987 4567889999999999999999 9999864321
Q ss_pred ccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 564 HTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
..... ....... ....+ .......+.+++.+||+.||++|||+.|+++
T Consensus 236 -----~~~~~---~~~~~~~-~~~~~------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 236 -----RQANI---LLGACSL-DCLHP------EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -----HHHHH---HTTCCCC-TTSCT------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----HHHHH---HhccCCc-cccCc------cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 11111 1111111 11100 1112234678999999999999999999984
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.4e-37 Score=344.19 Aligned_cols=241 Identities=21% Similarity=0.310 Sum_probs=191.4
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLL 415 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 415 (633)
.++|++.+.||+|+||.||+|.+...+|+.||||++...... .....+.+|++++++++||||++++
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~hp~iv~~~ 145 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDA-------------EAQAMAMAERQFLAEVVHPSIVQIF 145 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCH-------------HHHHHHHHHHGGGGGCCCTTBCCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCH-------------HHHHHHHHHHHHHHhcCCCCcCeEe
Confidence 368999999999999999999886557899999988643211 1145688999999999999999999
Q ss_pred eeeecCCc-----cEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEec
Q 006739 416 AHMARPDC-----HLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLD 490 (633)
Q Consensus 416 ~~~~~~~~-----~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~ 490 (633)
+++...+. .|+||||+++++|.+++.. .+++..++.++.||++||+|| |+.+|+||||||+|||++
T Consensus 146 ~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~l---H~~giiHrDlkp~NIll~ 216 (681)
T 2pzi_A 146 NFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYL---HSIGLVYNDLKPENIMLT 216 (681)
T ss_dssp EEEEEECTTSCEEEEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEC
T ss_pred eeEeecCCCCCceeEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHH---HHCCCeecccChHHeEEe
Confidence 99987665 6999999999999987642 699999999999999999999 678999999999999999
Q ss_pred CCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchH
Q 006739 491 DDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSL 570 (633)
Q Consensus 491 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~ 570 (633)
.+ .+||+|||+++..... ....||++|+|||++.+. ++.++|||||||++|||++|..||........
T Consensus 217 ~~-~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~---- 284 (681)
T 2pzi_A 217 EE-QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL---- 284 (681)
T ss_dssp SS-CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----
T ss_pred CC-cEEEEecccchhcccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc----
Confidence 86 8999999999876543 335799999999998765 48899999999999999999988765322100
Q ss_pred HHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCC-HHHHHHHHHh
Q 006739 571 VKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPN-SKDVRCMLSQ 630 (633)
Q Consensus 571 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs-~~ev~~~l~~ 630 (633)
... .+ .......+.+++.+||+.||++||+ ++++.+.|..
T Consensus 285 ------------~~~--~~------~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 285 ------------PED--DP------VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ------------CTT--CH------HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ------------ccc--cc------ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 000 00 0011234788999999999999995 5556666654
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.7e-36 Score=303.42 Aligned_cols=234 Identities=13% Similarity=0.090 Sum_probs=181.1
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccce
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA 416 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 416 (633)
++|++.+.||+|+||.||+|+.. .+++.||+|++........ ...+.+.+|+.++.+++||||+++++
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~hp~iv~~~~ 98 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDT-ALDRQVALTFVDPQGVLPD-----------DVLQETLSRTLRLSRIDKPGVARVLD 98 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEET-TTTEEEEEEESCTTCCSCH-----------HHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEec-CCCceEEEEEECcccccCH-----------HHHHHHHHHHHHHhcCCCCCcceeeE
Confidence 57999999999999999999874 5689999999976543211 12467889999999999999999999
Q ss_pred eeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceE
Q 006739 417 HMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEAR 496 (633)
Q Consensus 417 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~k 496 (633)
++.+.+..|+||||+++++|.+++.. . ....++.+|+.|+++||+|| |+.+|+||||||+||+++.++.+|
T Consensus 99 ~~~~~~~~~lv~e~~~g~~L~~~l~~-----~-~~~~~~~~i~~ql~~aL~~l---H~~givH~Dikp~NIll~~~g~~k 169 (286)
T 3uqc_A 99 VVHTRAGGLVVAEWIRGGSLQEVADT-----S-PSPVGAIRAMQSLAAAADAA---HRAGVALSIDHPSRVRVSIDGDVV 169 (286)
T ss_dssp EEEETTEEEEEEECCCEEEHHHHHTT-----C-CCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEEETTSCEE
T ss_pred EEEECCcEEEEEEecCCCCHHHHHhc-----C-CChHHHHHHHHHHHHHHHHH---HHCCCccCCCCcccEEEcCCCCEE
Confidence 99999999999999999999999853 1 35557889999999999999 678999999999999999999999
Q ss_pred EcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHHH
Q 006739 497 IADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRN 576 (633)
Q Consensus 497 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 576 (633)
|+++| |++ .++.++|||||||++|||++|+.||.............+ .
T Consensus 170 l~~~~----------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~---~ 217 (286)
T 3uqc_A 170 LAYPA----------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER---D 217 (286)
T ss_dssp ECSCC----------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB---C
T ss_pred EEecc----------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH---H
Confidence 98554 222 357899999999999999999999976433211100000 0
Q ss_pred hhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHHHHHhhh
Q 006739 577 VMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIR 632 (633)
Q Consensus 577 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~~l~~~~ 632 (633)
......... ...... ...+.+++.+||+.||++| |+.|+++.|++++
T Consensus 218 ~~~~~~~~~----~~~~~~----~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~ 264 (286)
T 3uqc_A 218 TAGQPIEPA----DIDRDI----PFQISAVAARSVQGDGGIR-SASTLLNLMQQAT 264 (286)
T ss_dssp TTSCBCCHH----HHCTTS----CHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred hccCCCChh----hcccCC----CHHHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence 000000000 111111 2237888999999999999 9999999998864
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=8.4e-37 Score=322.09 Aligned_cols=247 Identities=17% Similarity=0.163 Sum_probs=180.6
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC-Cccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRH-RNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l 414 (633)
...|...+.||+|+||.||+|++. .+|+.||||++........ ...+.+++|+.+++.++| +|....
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~-~~g~~vAvK~~~~~~~~~~-----------~~~~~~~~E~~~~~~l~~~~~~~~~ 144 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQ-ETGESFEVHVPYFTERPPS-----------NAIKQMKEEVLRLRLLRGIKNQKQA 144 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEECCSCC---------------CCHHHHHHHHGGGGSTTCCSHHHH
T ss_pred ceeEEEecccccCCCEEEEEEEec-CCCCceEEEEEecCCCccH-----------HHHHHHHHHHHHHHhhccCCCHHHH
Confidence 345778899999999999999864 5789999999864332111 114568899999999987 322211
Q ss_pred cee---------------------eec-----CCccEEEEecccCCCHHHHHhhh---cCCCCCCCHHHHHHHHHHHHHH
Q 006739 415 LAH---------------------MAR-----PDCHLLVYEFMKNGSLQDILNDV---SQGRRELDWLARHKIALGVACG 465 (633)
Q Consensus 415 ~~~---------------------~~~-----~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~~ 465 (633)
..+ +.. ....+++|+++ +++|.+++... ......+++..+..++.|+++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~a 223 (413)
T 3dzo_A 145 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRL 223 (413)
T ss_dssp HHHTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHH
Confidence 111 111 12346677766 67999988532 2234568899999999999999
Q ss_pred HHHHHhcCCCCeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCccccccccc----------ccCCC
Q 006739 466 LEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYH----------QTLKF 535 (633)
Q Consensus 466 L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~ 535 (633)
|+|| |+.+|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..+
T Consensus 224 L~~L---H~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~ 294 (413)
T 3dzo_A 224 LASL---HHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLM 294 (413)
T ss_dssp HHHH---HHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEE
T ss_pred HHHH---HhCCcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCC
Confidence 9999 6789999999999999999999999999998875432 234567 999999998 55568
Q ss_pred CCccchHHHHHHHHHHHhCCCCCcccccccccchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCC
Q 006739 536 TDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSP 615 (633)
Q Consensus 536 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP 615 (633)
+.++|||||||++|||++|+.||........... ..... .. . ...+.+++.+||+.||
T Consensus 295 ~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~-------~~~~~-----------~~-~---~~~~~~li~~~l~~dP 352 (413)
T 3dzo_A 295 TFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEW-------IFRSC-----------KN-I---PQPVRALLEGFLRYPK 352 (413)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGG-------GGSSC-----------CC-C---CHHHHHHHHHHTCSSG
T ss_pred CchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHH-------HHhhc-----------cc-C---CHHHHHHHHHHccCCh
Confidence 8899999999999999999999975432111110 00000 01 1 1347889999999999
Q ss_pred CCCCCHHHHHH
Q 006739 616 RERPNSKDVRC 626 (633)
Q Consensus 616 ~~RPs~~ev~~ 626 (633)
++||++.++++
T Consensus 353 ~~Rpt~~~~l~ 363 (413)
T 3dzo_A 353 EDRLLPLQAME 363 (413)
T ss_dssp GGSCCHHHHTT
T ss_pred hhCcCHHHHHh
Confidence 99999887754
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=7.1e-36 Score=301.56 Aligned_cols=232 Identities=20% Similarity=0.294 Sum_probs=174.6
Q ss_pred hcCcccc-cccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHh-hcCCCCcccc
Q 006739 336 EDGLASL-EKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTV-GQIRHRNLLP 413 (633)
Q Consensus 336 ~~~~~~~-~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~ 413 (633)
.++|.+. +.||+|+||.||++... .+++.||+|++.. ...+.+|+.++ +..+||||++
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~-------------------~~~~~~e~~~~~~~~~h~~i~~ 75 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNK-RTQEKFALKMLQD-------------------CPKARREVELHWRASQCPHIVR 75 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEC-------------------SHHHHHHHHHHHHHTTSTTBCC
T ss_pred ccchhhcCcccccCCCeEEEEEEEc-CCCcEEEEEEecc-------------------cHHHHHHHHHHHHhccCCCchh
Confidence 4677777 78999999999999864 5789999999843 12355677777 5568999999
Q ss_pred cceeeec----CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEe
Q 006739 414 LLAHMAR----PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLL 489 (633)
Q Consensus 414 l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill 489 (633)
+++++.. ....++||||+++|+|.+++... ....+++..++.++.|++.||+|| |+.+|+||||||+||++
T Consensus 76 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~Nil~ 150 (299)
T 3m2w_A 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYL---HSINIAHRDVKPENLLY 150 (299)
T ss_dssp EEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEE
T ss_pred HHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEE
Confidence 9999876 66789999999999999999863 235699999999999999999999 67899999999999999
Q ss_pred cC---CCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCcccccccc
Q 006739 490 DD---DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTE 566 (633)
Q Consensus 490 ~~---~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~ 566 (633)
+. ++.+||+|||++..... ..++.++||||+||++|||++|+.||........
T Consensus 151 ~~~~~~~~~kl~Dfg~a~~~~~------------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~ 206 (299)
T 3m2w_A 151 TSKRPNAILKLTDFGFAKETTG------------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 206 (299)
T ss_dssp SSSSTTCCEEECCCTTCEECTT------------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC------
T ss_pred ecCCCCCcEEEecccccccccc------------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh
Confidence 98 78899999999865332 2456789999999999999999999965332110
Q ss_pred cchHHHHHHHhhccCCcchhhhhhhhhcCCHHHHHHHHHHHhHhccCCCCCCCCHHHHHH
Q 006739 567 EMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRC 626 (633)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~~ 626 (633)
..... ........ ......... ....+.+++.+||+.||++|||+.|+++
T Consensus 207 ~~~~~----~~~~~~~~--~~~~~~~~~----~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 207 SPGMK----TRIRMGQY--EFPNPEWSE----VSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp -CCSC----CSSCTTCC--SSCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hHHHH----HHHhhccc--cCCchhccc----CCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00000 00000000 000000011 1234788999999999999999999986
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.3e-36 Score=310.55 Aligned_cols=250 Identities=20% Similarity=0.156 Sum_probs=178.9
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC--------
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-------- 407 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-------- 407 (633)
.++|++.+.||+|+||.||+|+. +|+.||||++.....+....... ...+.+.+|+.+++.++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~---~~~~vAvK~~~~~~~~~~~~~~~------~~~~~~~~E~~~l~~l~~l~~~~~~ 89 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA---DHTPVAIKIIAIEGPDLVNGSHQ------KTFEEILPEIIISKELSLLSGEVCN 89 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE---TTEEEEEEEEEESCSSCBTTBCC------BCHHHHHHHHHHHHHHHHGGGCSSS
T ss_pred cccchheeeecccCceEEEEEEe---CCceEEEEEEecCCccccccccc------hhHHHHHHHHHHHHHHHHhhccccc
Confidence 46789999999999999999986 68999999997654221000000 00345667777777665
Q ss_pred ------------------CCcccccceeeec-------------CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHH
Q 006739 408 ------------------HRNLLPLLAHMAR-------------PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARH 456 (633)
Q Consensus 408 ------------------h~niv~l~~~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~ 456 (633)
||||+++++++.+ .+..++||||+++|++.+.+.+ ..+++..+.
T Consensus 90 ~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~ 164 (336)
T 2vuw_A 90 RTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAK 164 (336)
T ss_dssp BCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHH
T ss_pred cCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHH
Confidence 4555555555544 6789999999999976665532 458999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCC--------------------ceEEcccccccccCCCCCcceec
Q 006739 457 KIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDM--------------------EARIADFGLAKAMPDAQTHITTS 516 (633)
Q Consensus 457 ~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~ 516 (633)
.++.||+.||+||| ++.+|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 165 ~i~~qi~~aL~~lH--~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------- 235 (336)
T 2vuw_A 165 SILHQLTASLAVAE--ASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------- 235 (336)
T ss_dssp HHHHHHHHHHHHHH--HHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------
T ss_pred HHHHHHHHHHHHHH--HhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------
Confidence 99999999999994 278899999999999999887 8999999999876542
Q ss_pred ccccCcccccccccccCCCCCccchHHHHHH-HHHHHhCCCCCcccccccccchHHHHHH-HhhccCCcchhhhhhhhhc
Q 006739 517 NVAGTVGYIAPEYHQTLKFTDKCDIYSFGVL-LAVLVMGRLPSDDFFQHTEEMSLVKWMR-NVMTSENPTRAIDAKLLEN 594 (633)
Q Consensus 517 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~-l~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~ 594 (633)
...||+.|+|||++.+.. +.++||||++++ .+++++|..||.... ......+.+. ...........
T Consensus 236 ~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~-------- 303 (336)
T 2vuw_A 236 IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL---WLHYLTDKMLKQMTFKTKCNTP-------- 303 (336)
T ss_dssp EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH---HHHHHHHHHHHTCCCSSCCCSH--------
T ss_pred cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh---hhhHHHHhhhhhhccCcccchh--------
Confidence 247999999999998766 889999998776 788889999975310 0001111111 11111111111
Q ss_pred CCHHHHHHHHHHHhHhccCCCCCCCCHHHHH
Q 006739 595 GYEEQMLLVLKIACFCTVDSPRERPNSKDVR 625 (633)
Q Consensus 595 ~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev~ 625 (633)
........+.+++.+||+.| |++|++
T Consensus 304 ~~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 304 AMKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred hhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 11234456889999999976 999887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=2.2e-30 Score=282.33 Aligned_cols=196 Identities=19% Similarity=0.117 Sum_probs=134.0
Q ss_pred ccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCcccccceeeecCC
Q 006739 344 KIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQI-RHRNLLPLLAHMARPD 422 (633)
Q Consensus 344 ~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 422 (633)
..+.|++|.+..++. ...|+.||+|.+.+........ ....+...++|.+|+++|+++ .|+||+++++++.+++
T Consensus 241 ~~~~~~~~~h~~~rr-~~fg~~~~~K~~~~~~~~~~~~----~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRR-YFFGEDYVCKFFYYDMPHGILT----AEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ 315 (569)
T ss_dssp C-C--------CCEE-EEECSSEEEEEEESSCSTTCSC----HHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS
T ss_pred ccccCCccccccccc-ccccceeEEEEEecccccccch----hhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC
Confidence 345666665555432 2368899999997654322111 122334467899999999999 6999999999999999
Q ss_pred ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceEEccccc
Q 006739 423 CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGL 502 (633)
Q Consensus 423 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 502 (633)
..||||||++|++|.+++.. ..+++.. +|+.||+.||+|+ |+++||||||||+|||++++|.+||+|||+
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~yl---H~~GIIHRDIKPeNILL~~dg~vKL~DFGl 385 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAAL---EKQGFWHDDVRPWNVMVDARQHARLIDFGS 385 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHH---HHTTCEESCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHH---HHCCceeccCchHhEEECCCCCEEEeeccc
Confidence 99999999999999999975 3445553 5899999999999 789999999999999999999999999999
Q ss_pred ccccCCCCCcceecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCC
Q 006739 503 AKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLP 557 (633)
Q Consensus 503 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p 557 (633)
|+........ ....+||++|+|||++.+ .+..++|+||+|++++++.++..|
T Consensus 386 Ar~~~~~~~~--~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 386 IVTTPQDCSW--PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp EESCC---CC--SHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CeeCCCCCcc--ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 9977654332 234679999999999876 567789999999998887665544
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=9.3e-28 Score=260.27 Aligned_cols=193 Identities=18% Similarity=0.189 Sum_probs=150.5
Q ss_pred cccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccceeeec
Q 006739 341 SLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMAR 420 (633)
Q Consensus 341 ~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 420 (633)
..+.||+|+||.||++.. .+..+++|+............ .....+++.+|++++++++||||+++..++..
T Consensus 340 ~~~~LG~G~fg~Vy~~~~---~~~~~~~k~~~~~~~~~~~~~------~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~ 410 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY---LDFDVIIKERVKKGYRDERLD------ENIRKSRTAREARYLALVKDFGIPAPYIFDVD 410 (540)
T ss_dssp --------CCEEEEEEEC---SSCEEEEEEECCCTTSCHHHH------HHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE
T ss_pred CCCEEeeCCCEEEEEEEE---CCCeEEEEEEecccccchhhh------hHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe
Confidence 356899999999999965 678899998755332211111 11225678999999999999999988888878
Q ss_pred CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceEEccc
Q 006739 421 PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADF 500 (633)
Q Consensus 421 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~kl~Df 500 (633)
.+..++||||+++++|.+++.. +..++.|+++||+|| |+++|+||||||+|||+++ .+||+||
T Consensus 411 ~~~~~lVmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~L---H~~gIiHrDiKp~NILl~~--~~kL~DF 473 (540)
T 3en9_A 411 LDNKRIMMSYINGKLAKDVIED------------NLDIAYKIGEIVGKL---HKNDVIHNDLTTSNFIFDK--DLYIIDF 473 (540)
T ss_dssp TTTTEEEEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHH---HHTTEECTTCCTTSEEESS--SEEECCC
T ss_pred CCccEEEEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHH---HHCcCccCCCCHHHEEECC--eEEEEEC
Confidence 8889999999999999999864 468999999999999 6789999999999999999 9999999
Q ss_pred ccccccCCCCCcc-----eecccccCccccccccccc--CCCCCccchHHHHHHHHHHHhCCCCCc
Q 006739 501 GLAKAMPDAQTHI-----TTSNVAGTVGYIAPEYHQT--LKFTDKCDIYSFGVLLAVLVMGRLPSD 559 (633)
Q Consensus 501 G~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~elltg~~p~~ 559 (633)
|+++......... ......||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 474 Gla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 474 GLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp TTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 9999876542211 1134679999999999987 567888999999998888888777663
No 253
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.93 E-value=7.6e-26 Score=229.26 Aligned_cols=178 Identities=29% Similarity=0.453 Sum_probs=160.5
Q ss_pred CCChhHHHHHHHHHHhcCCCC---CCCC-CCCCC--CCceeeCCCCCCCCcceeeeEEEEecCCCCcc--cCCccccCCc
Q 006739 27 NLDRSDYKALSVILRDLGGQQ---LFIP-SDPCS--TPGVFCERRLSDNNTYVLKITKLVFVPRELTG--VLSPSIGRLS 98 (633)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~~---~w~~-~~~C~--~~gv~c~~~~~~~~~~~~~~~~L~l~~n~l~~--~~~~~~~~l~ 98 (633)
.|.++|.+||++||.+++++. .|.. .+||. |.||.|+.... ..+|+.|+|++|++++ .+|..|.+++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~-----~~~l~~L~L~~~~l~~~~~~~~~l~~l~ 76 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQ-----TYRVNNLDLSGLNLPKPYPIPSSLANLP 76 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSS-----CCCEEEEEEECCCCSSCEECCGGGGGCT
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCC-----CceEEEEECCCCCccCCcccChhHhCCC
Confidence 589999999999999997643 4754 48998 99999975321 1289999999999999 8999999999
Q ss_pred cccEEEccC-CCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeC
Q 006739 99 ELRELSLAN-NSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSL 176 (633)
Q Consensus 99 ~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l 176 (633)
+|++|+|++ |.+++.+|..|.++++|++|+|++|++++.+|..|..+++|++|+|++|.+++.. ..+..+++|++|+|
T Consensus 77 ~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 156 (313)
T 1ogq_A 77 YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156 (313)
T ss_dssp TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC
T ss_pred CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEEC
Confidence 999999995 9999999999999999999999999999999999999999999999999999654 67899999999999
Q ss_pred cCCcCCccCCcccccCC-CCCeeccCCCCCCCCC
Q 006739 177 AKNLFTGKVPTSIRTFR-NLQFFDFSGNSLLEGP 209 (633)
Q Consensus 177 ~~N~l~~~~p~~~~~~~-~L~~l~l~~N~l~~~~ 209 (633)
++|+|+|.+|..+..++ +|+.|++++|++....
T Consensus 157 ~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~ 190 (313)
T 1ogq_A 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKI 190 (313)
T ss_dssp CSSCCEEECCGGGGCCCTTCCEEECCSSEEEEEC
T ss_pred cCCcccCcCCHHHhhhhhcCcEEECcCCeeeccC
Confidence 99999999999999998 9999999999997433
No 254
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.88 E-value=3.2e-22 Score=192.76 Aligned_cols=162 Identities=19% Similarity=0.179 Sum_probs=143.2
Q ss_pred CCCCCCCCCCCceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCc
Q 006739 48 LFIPSDPCSTPGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLE 125 (633)
Q Consensus 48 ~w~~~~~C~~~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 125 (633)
.|...+.|+|.+|.|........ ....+++.|+|++|++++..+..|.++++|+.|+|++|+|++..+..|..+++|+
T Consensus 12 ~~~~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 91 (229)
T 3e6j_A 12 ACPSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLT 91 (229)
T ss_dssp CCCTTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred cCCCCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcC
Confidence 35666889999999987422221 2346899999999999999999999999999999999999886667789999999
Q ss_pred EEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCC
Q 006739 126 ILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSL 205 (633)
Q Consensus 126 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l 205 (633)
+|+|++|+|++..+..|..+++|+.|+|++|+|+..+..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++
T Consensus 92 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 171 (229)
T 3e6j_A 92 VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPW 171 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCB
T ss_pred EEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCc
Confidence 99999999997767778999999999999999998888889999999999999999977777899999999999999999
Q ss_pred CCCC
Q 006739 206 LEGP 209 (633)
Q Consensus 206 ~~~~ 209 (633)
.+..
T Consensus 172 ~c~c 175 (229)
T 3e6j_A 172 DCEC 175 (229)
T ss_dssp CTTB
T ss_pred cCCc
Confidence 7654
No 255
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=2.9e-23 Score=235.18 Aligned_cols=175 Identities=27% Similarity=0.332 Sum_probs=151.2
Q ss_pred CCChhHHHHHHHHHHhcCCCCCCCC------CCC--CCC------------CceeeCCCCCCCCcceeeeEEEEecCCCC
Q 006739 27 NLDRSDYKALSVILRDLGGQQLFIP------SDP--CST------------PGVFCERRLSDNNTYVLKITKLVFVPREL 86 (633)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~~~w~~------~~~--C~~------------~gv~c~~~~~~~~~~~~~~~~L~l~~n~l 86 (633)
+...+|+.||++||++++++ .|.. .+| |.| .||.|+.. .+|+.|+|++|++
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~-~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~--------~~V~~L~Ls~~~L 335 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK-NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNN--------GRVTGLSLAGFGA 335 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG-GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTT--------SCEEEEECTTTCC
T ss_pred ccchHHHHHHHHHHHHcCCC-CCCcCCCcccccCCccccccccccccccCcCceEecCC--------CCEEEEECccCCC
Confidence 34568999999999999876 6732 256 999 99999852 2899999999999
Q ss_pred cccCCccccCCccccEEEc-cCCCCCCC----------------------------------------------------
Q 006739 87 TGVLSPSIGRLSELRELSL-ANNSLVDL---------------------------------------------------- 113 (633)
Q Consensus 87 ~~~~~~~~~~l~~L~~L~l-~~N~l~~~---------------------------------------------------- 113 (633)
.|.+|++|++|++|+.|+| ++|.++|.
T Consensus 336 ~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~ 415 (876)
T 4ecn_A 336 KGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMK 415 (876)
T ss_dssp EEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSC
T ss_pred CCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccc
Confidence 9999999999999999999 77755443
Q ss_pred ------------------------CchhccCCCCCcEEEccCccCCC-----------------CCccccc--CCCCCCE
Q 006739 114 ------------------------LPPQIVDCKKLEILNVQNNQFSG-----------------TIPSDLS--SLIRLRV 150 (633)
Q Consensus 114 ------------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~ 150 (633)
+|..|+++++|++|+|++|+|+| .+|..++ ++++|+.
T Consensus 416 ~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 416 PIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred ccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 78889999999999999999998 3899988 9999999
Q ss_pred EEccCCcCCCCC-ccCCCCCCCCeEeCcCCc-CCc-cCCcccccCC-------CCCeeccCCCCCCCCCc
Q 006739 151 LDLSGNSFSGNL-GFLKYFPNLEHLSLAKNL-FTG-KVPTSIRTFR-------NLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 151 L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~-l~~-~~p~~~~~~~-------~L~~l~l~~N~l~~~~~ 210 (633)
|+|++|++.+.. ..+.++++|+.|+|++|+ |+| .+|..++.++ +|+.|+|++|++..+|.
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~ 565 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPA 565 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCC
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCC
Confidence 999999988765 678999999999999998 998 8888777665 99999999999986664
No 256
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=3.9e-23 Score=205.31 Aligned_cols=161 Identities=15% Similarity=0.098 Sum_probs=119.5
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHH----HHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEED----SKLLNKKMRQIRSEINTVGQIRHRNL 411 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~e~~~l~~l~h~ni 411 (633)
...|.+.+.||+|+||.||+|.+ .+|+.||+|.+.............. ..........+.+|++++++++ |
T Consensus 89 ~~~~~~~~~iG~G~~g~Vy~~~~--~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~- 163 (282)
T 1zar_A 89 GKVDAIGKLMGEGKESAVFNCYS--EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G- 163 (282)
T ss_dssp TSCSEEEEEEEECSSEEEEEEEE--TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-
T ss_pred CeEEEecCEeccCCCceEEEEEe--CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-
Confidence 34566779999999999999987 4799999999865432111100000 0001122567899999999999 5
Q ss_pred cccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecC
Q 006739 412 LPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDD 491 (633)
Q Consensus 412 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~ 491 (633)
+++.+++.. +..++||||+++++|.+ +.. .....++.|+++||+|| |+.+|+||||||+|||++
T Consensus 164 ~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~l---H~~giiHrDlkp~NILl~- 227 (282)
T 1zar_A 164 LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKF---YHRGIVHGDLSQYNVLVS- 227 (282)
T ss_dssp SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEEE-
T ss_pred CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHH---HHCCCEeCCCCHHHEEEE-
Confidence 777776544 56799999999999988 421 12347999999999999 688999999999999999
Q ss_pred CCceEEcccccccccCCCCCcceecccccCccccccccccc
Q 006739 492 DMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQT 532 (633)
Q Consensus 492 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 532 (633)
++.+||+|||+|+. +..|+|||++.+
T Consensus 228 ~~~vkl~DFG~a~~---------------~~~~~a~e~l~r 253 (282)
T 1zar_A 228 EEGIWIIDFPQSVE---------------VGEEGWREILER 253 (282)
T ss_dssp TTEEEECCCTTCEE---------------TTSTTHHHHHHH
T ss_pred CCcEEEEECCCCeE---------------CCCCCHHHHHHH
Confidence 99999999999863 345788998753
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.87 E-value=1.8e-22 Score=224.51 Aligned_cols=172 Identities=23% Similarity=0.324 Sum_probs=152.1
Q ss_pred hhHHHHHHHHHHhcCCCC------------CCCC-CCCCCC---CceeeCCCCCCCCcceeeeEEEEecCCCCcccCCcc
Q 006739 30 RSDYKALSVILRDLGGQQ------------LFIP-SDPCST---PGVFCERRLSDNNTYVLKITKLVFVPRELTGVLSPS 93 (633)
Q Consensus 30 ~~~~~~l~~~~~~~~~~~------------~w~~-~~~C~~---~gv~c~~~~~~~~~~~~~~~~L~l~~n~l~~~~~~~ 93 (633)
..|++||.+++..+++.. .|.. .++|.| .||.|+.. .+|+.|+|++|++.|.+|++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~--------~~V~~L~L~~~~l~g~lp~~ 100 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN--------GRVTGLSLEGFGASGRVPDA 100 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT--------CCEEEEECTTSCCEEEECGG
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC--------CCEEEEEecCcccCCcCChH
Confidence 479999999999987632 3743 488999 99999754 28999999999999999999
Q ss_pred ccCCccccEEEccCCC----------------------------------------------------------------
Q 006739 94 IGRLSELRELSLANNS---------------------------------------------------------------- 109 (633)
Q Consensus 94 ~~~l~~L~~L~l~~N~---------------------------------------------------------------- 109 (633)
|++|++|+.|+|++|.
T Consensus 101 l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 180 (636)
T 4eco_A 101 IGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSR 180 (636)
T ss_dssp GGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCC
T ss_pred HhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccc
Confidence 9999999999999983
Q ss_pred --------------CCCCCchhccCCCCCcEEEccCccCCCC-----------------Cccccc--CCCCCCEEEccCC
Q 006739 110 --------------LVDLLPPQIVDCKKLEILNVQNNQFSGT-----------------IPSDLS--SLIRLRVLDLSGN 156 (633)
Q Consensus 110 --------------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~N 156 (633)
+++ +|..|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|
T Consensus 181 ~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 181 ITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECC
T ss_pred cchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCC
Confidence 445 788999999999999999999985 999999 9999999999999
Q ss_pred cCCCCC-ccCCCCCCCCeEeCcCCc-CCc-cCCcccccC------CCCCeeccCCCCCCCCCc
Q 006739 157 SFSGNL-GFLKYFPNLEHLSLAKNL-FTG-KVPTSIRTF------RNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 157 ~l~~~~-~~~~~l~~L~~L~l~~N~-l~~-~~p~~~~~~------~~L~~l~l~~N~l~~~~~ 210 (633)
++.+.. ..+.++++|++|+|++|+ ++| .+|..++.+ ++|+.|++++|+++.+|.
T Consensus 260 ~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~ 322 (636)
T 4eco_A 260 PNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPV 322 (636)
T ss_dssp TTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCC
T ss_pred cCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCc
Confidence 988865 678999999999999998 998 899888876 899999999999986665
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.85 E-value=1.2e-21 Score=222.97 Aligned_cols=173 Identities=28% Similarity=0.334 Sum_probs=101.9
Q ss_pred HhhCCChhHHHHHHHHHHhcCCC---CCCC-CCCCCCCCceeeCCCCCCCCcceeeeEEEEecCCCCccc---CCccccC
Q 006739 24 ARLNLDRSDYKALSVILRDLGGQ---QLFI-PSDPCSTPGVFCERRLSDNNTYVLKITKLVFVPRELTGV---LSPSIGR 96 (633)
Q Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~---~~w~-~~~~C~~~gv~c~~~~~~~~~~~~~~~~L~l~~n~l~~~---~~~~~~~ 96 (633)
++++..++|++||++||+++.++ ..|. ..|||.|.||.|+.. +|+.|+|+++.+.|. +++++.+
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~gv~C~~~---------~v~~L~L~~~~l~g~~~~l~~~l~~ 75 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDD---------KVTSIDLSSKPLNVGFSAVSSSLLS 75 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGSTTEEEETT---------EEEEEECTTSCCCEEHHHHHHHTTT
T ss_pred ccccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCcceEECCC---------cEEEEECCCCCcCCccCccChhHhc
Confidence 44455789999999999998764 3485 458999999999732 899999999999887 5554544
Q ss_pred C-----------------------ccccEEEccCCCCCCCCch--hccCCCCCcEEEccCccCCCCCcccc-cCCCCCCE
Q 006739 97 L-----------------------SELRELSLANNSLVDLLPP--QIVDCKKLEILNVQNNQFSGTIPSDL-SSLIRLRV 150 (633)
Q Consensus 97 l-----------------------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~ 150 (633)
+ ++|++|+|++|.+++.+|. .++++++|++|+|++|.+++.+|..+ .++++|++
T Consensus 76 L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 155 (768)
T 3rgz_A 76 LTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155 (768)
T ss_dssp CTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSE
T ss_pred cCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCE
Confidence 4 4455555555554444444 44445555555555555544444433 44445555
Q ss_pred EEccCCcCCCCCc-c---CCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCC
Q 006739 151 LDLSGNSFSGNLG-F---LKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLE 207 (633)
Q Consensus 151 L~l~~N~l~~~~~-~---~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~ 207 (633)
|+|++|++++.++ . +.++++|++|++++|.+++.+|. ..+++|++|++++|++..
T Consensus 156 L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~ 214 (768)
T 3rgz_A 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFST 214 (768)
T ss_dssp EECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCS
T ss_pred EECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCC
Confidence 5555555444431 1 44455555555555555544332 445555555555555543
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.85 E-value=4e-21 Score=195.72 Aligned_cols=180 Identities=21% Similarity=0.202 Sum_probs=131.4
Q ss_pred CCChhHHHHHHHHHHhcC-CCC----CCC-----CCCCCCCCceeeCCCCCCC-CcceeeeEEEEecCCCCcccCCcccc
Q 006739 27 NLDRSDYKALSVILRDLG-GQQ----LFI-----PSDPCSTPGVFCERRLSDN-NTYVLKITKLVFVPRELTGVLSPSIG 95 (633)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~-~~~----~w~-----~~~~C~~~gv~c~~~~~~~-~~~~~~~~~L~l~~n~l~~~~~~~~~ 95 (633)
+...+|+.||++||..+. +.. .|. ..++|.|.|+.|....... .....+++.|+|++|+++ .+|+.+.
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 456789999999999874 322 262 3478999999995310000 000126788888888887 4666777
Q ss_pred CCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCC-ccCC--------
Q 006739 96 RLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLK-------- 166 (633)
Q Consensus 96 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~-------- 166 (633)
++++|++|+|++|.|+ .+|..++++++|++|+|++|+|+ .+|..++.+++|++|+|++|++.+.. ..+.
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 7888888888888887 47878888888888888888888 77888888888888888887665544 3333
Q ss_pred -CCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 167 -YFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 167 -~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
.+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|++..+|.
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~ 223 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGP 223 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCG
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCch
Confidence 3788888888888887 777778888888888888888876554
No 260
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=4.9e-21 Score=183.21 Aligned_cols=154 Identities=20% Similarity=0.262 Sum_probs=136.6
Q ss_pred CCCCceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCc
Q 006739 55 CSTPGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNN 132 (633)
Q Consensus 55 C~~~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 132 (633)
|.|..|.|........ ..+.+++.|+|++|+|+++.+..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 7889999987422221 12457999999999999988889999999999999999999988999999999999999999
Q ss_pred cCCCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCC
Q 006739 133 QFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 133 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
+|+...+..|.++++|+.|+|++|+|++.+ ..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.|.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 999555556889999999999999999986 6789999999999999999988888899999999999999999663
No 261
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.6e-20 Score=178.16 Aligned_cols=155 Identities=20% Similarity=0.217 Sum_probs=135.5
Q ss_pred CCCCCceeeCCCCCCC--CcceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccC
Q 006739 54 PCSTPGVFCERRLSDN--NTYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQN 131 (633)
Q Consensus 54 ~C~~~gv~c~~~~~~~--~~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~ 131 (633)
.|.|.+|.|....... .....+++.|++++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 4889999998743221 22245799999999999988888899999999999999999987677789999999999999
Q ss_pred ccCCCCCcccccCCCCCCEEEccCCcCCCCCc-cCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCC
Q 006739 132 NQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLG-FLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 132 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
|+|++..+..|..+++|+.|+|++|++++.++ .+..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+.
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC
Confidence 99997666678999999999999999999884 578999999999999999977777789999999999999998654
No 262
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=9.5e-21 Score=181.18 Aligned_cols=154 Identities=18% Similarity=0.218 Sum_probs=136.5
Q ss_pred CCCCceeeCCCCCCCC--cceeeeEEEEecCCCCcccCC-ccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccC
Q 006739 55 CSTPGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLS-PSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQN 131 (633)
Q Consensus 55 C~~~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~ 131 (633)
|.|..+.|........ .....++.|+|++|+|++..+ ..|.++++|+.|+|++|+|+++.+..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 7889999987432221 123467899999999999865 4689999999999999999998778999999999999999
Q ss_pred ccCCCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCC
Q 006739 132 NQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 132 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
|+|++..|..|..+++|++|+|++|+|++.+ ..+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++.+.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 9999888888999999999999999999986 6789999999999999999998899999999999999999999654
No 263
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.83 E-value=5.8e-20 Score=179.80 Aligned_cols=139 Identities=24% Similarity=0.254 Sum_probs=127.9
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
+.+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 34 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 34 PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 45799999999999999888999999999999999999998888899999999999999999977778889999999999
Q ss_pred ccCCcCCCCCc-cCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 153 LSGNSFSGNLG-FLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 153 l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
|++|+|++.++ .+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++..+++.
T Consensus 114 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 114 LGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 99999998884 578999999999999999977777899999999999999999877653
No 264
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.82 E-value=1.6e-19 Score=178.76 Aligned_cols=158 Identities=22% Similarity=0.219 Sum_probs=132.6
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
+.+++.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|+.|+
T Consensus 36 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 115 (270)
T 2o6q_A 36 PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELR 115 (270)
T ss_dssp CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEE
T ss_pred CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEE
Confidence 34689999999999998888899999999999999999986666778999999999999999976667789999999999
Q ss_pred ccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcccccccCCCCccccccccccc
Q 006739 153 LSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIPVMRRVGPSGFQYPKRYVLAE 231 (633)
Q Consensus 153 l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (633)
|++|++++.+ ..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|++..+++. .|..+.++..+.
T Consensus 116 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--------~~~~l~~L~~L~ 187 (270)
T 2o6q_A 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEG--------AFDKLTELKTLK 187 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT--------TTTTCTTCCEEE
T ss_pred CCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChh--------HhccCCCcCEEE
Confidence 9999999887 4578999999999999999976666789999999999999999877653 233344555555
Q ss_pred cccCCCC
Q 006739 232 TTTNGRS 238 (633)
Q Consensus 232 ~~~~~~~ 238 (633)
...+...
T Consensus 188 L~~N~l~ 194 (270)
T 2o6q_A 188 LDNNQLK 194 (270)
T ss_dssp CCSSCCS
T ss_pred CCCCcCC
Confidence 5555443
No 265
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.79 E-value=9.1e-19 Score=171.24 Aligned_cols=136 Identities=24% Similarity=0.259 Sum_probs=126.6
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|+|++|.+++..+..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 45899999999999999888999999999999999999998778899999999999999999976666789999999999
Q ss_pred ccCCcCCCCCc-cCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCC
Q 006739 153 LSGNSFSGNLG-FLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 153 l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
|++|+|++.++ .+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999999885 689999999999999999988888899999999999999999765
No 266
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.79 E-value=1.1e-20 Score=203.11 Aligned_cols=132 Identities=19% Similarity=0.164 Sum_probs=113.4
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCccccc-CCCCCCEEE
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLS-SLIRLRVLD 152 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~ 152 (633)
.+++.|++++|.+++..+. .+++|+.|+|++|.|++..|..|+++++|++|+|++|.|++.+|..+. .+++|+.|+
T Consensus 99 ~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 3688999999999887654 357899999999999998888899999999999999999988888886 799999999
Q ss_pred ccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 153 LSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 153 l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
|++|.|++.+. +..+++|+.|+|++|+|++. |..+..+++|+.|+|++|+|..+|.
T Consensus 176 Ls~N~l~~~~~-~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~lp~ 231 (487)
T 3oja_A 176 LQYNFIYDVKG-QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVLIEK 231 (487)
T ss_dssp CTTSCCCEEEC-CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCEECT
T ss_pred cCCCccccccc-cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcccch
Confidence 99999998754 44689999999999999964 4458899999999999999976553
No 267
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.78 E-value=3.7e-19 Score=198.41 Aligned_cols=154 Identities=18% Similarity=0.138 Sum_probs=135.8
Q ss_pred ceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCC
Q 006739 59 GVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSG 136 (633)
Q Consensus 59 gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 136 (633)
.|.|....-..+ ..+.+++.|||++|+|+++.+.+|.++++|++|||++|+|+++.|.+|.++++|++|+|++|+|++
T Consensus 35 ~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~ 114 (635)
T 4g8a_A 35 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 114 (635)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred EEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCC
Confidence 578886422222 234589999999999999988999999999999999999999778899999999999999999997
Q ss_pred CCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCc-cCCcccccCCCCCeeccCCCCCCCCCccc
Q 006739 137 TIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTG-KVPTSIRTFRNLQFFDFSGNSLLEGPIPV 212 (633)
Q Consensus 137 ~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~~~~L~~l~l~~N~l~~~~~~~ 212 (633)
..+..|.++++|++|+|++|+|++.+ ..++++++|++|+|++|.|++ .+|..++.+++|++|++++|+|..+++..
T Consensus 115 l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 115 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccc
Confidence 77778999999999999999999988 468999999999999999986 46888999999999999999998877654
No 268
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.77 E-value=6.4e-19 Score=160.99 Aligned_cols=134 Identities=23% Similarity=0.249 Sum_probs=123.7
Q ss_pred eeEEEEecCCCCc-ccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 75 KITKLVFVPRELT-GVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 75 ~~~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
+++.|++++|+++ +.+|..+..+++|+.|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+|
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 7999999999998 77888899999999999999999985 78999999999999999999878988888999999999
Q ss_pred cCCcCCCCC--ccCCCCCCCCeEeCcCCcCCccCC---cccccCCCCCeeccCCCCCCCCCc
Q 006739 154 SGNSFSGNL--GFLKYFPNLEHLSLAKNLFTGKVP---TSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 154 ~~N~l~~~~--~~~~~l~~L~~L~l~~N~l~~~~p---~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
++|.+++.+ ..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.+.|.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 164 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPD 164 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCS
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhccc
Confidence 999999976 789999999999999999996555 488999999999999999987764
No 269
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77 E-value=5.9e-19 Score=173.05 Aligned_cols=152 Identities=19% Similarity=0.208 Sum_probs=106.9
Q ss_pred cccccccccccCeeEEEEEecCCCCeE--EEEEEccCCCcchhhhhHH----------HHHHHHHHHHHHHHHHHHhhcC
Q 006739 339 LASLEKIGSGGCGEVYKAELPGSNGKM--IAIKKVIQPPKDAAELTEE----------DSKLLNKKMRQIRSEINTVGQI 406 (633)
Q Consensus 339 ~~~~~~ig~G~~g~Vy~~~~~~~~~~~--vavK~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~e~~~l~~l 406 (633)
|++.+.||+|+||.||+|... .+|+. ||||+++............ ...........+.+|+.++.++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~-~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGV-FDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEE-ETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEc-CCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 567889999999999999872 27888 9999875542111100000 0000011234678899999999
Q ss_pred CCCccc--ccceeeecCCccEEEEecccC-C----CHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeee
Q 006739 407 RHRNLL--PLLAHMARPDCHLLVYEFMKN-G----SLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIH 479 (633)
Q Consensus 407 ~h~niv--~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH 479 (633)
+|+++. ..+++ ...++||||+.+ | +|.++... .++..+..++.|++.+|.||| ++.+|+|
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH--~~~givH 194 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLY--QEAELVH 194 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHH--HTSCEEC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHH--HHCCEEe
Confidence 888653 33332 367899999942 4 67666432 223456789999999999993 2889999
Q ss_pred CCCCCCCeEecCCCceEEccccccccc
Q 006739 480 RDLKPANVLLDDDMEARIADFGLAKAM 506 (633)
Q Consensus 480 ~Dikp~Nill~~~~~~kl~DfG~a~~~ 506 (633)
|||||+|||+++ .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999764
No 270
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.77 E-value=1.6e-18 Score=168.24 Aligned_cols=150 Identities=14% Similarity=0.170 Sum_probs=130.9
Q ss_pred eeeCCCCCCCCcceeeeEEEEecCCCCcccCCccccCCccccEEEccCCC-CCCCCchhccCCCCCcEEEccC-ccCCCC
Q 006739 60 VFCERRLSDNNTYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNS-LVDLLPPQIVDCKKLEILNVQN-NQFSGT 137 (633)
Q Consensus 60 v~c~~~~~~~~~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~ 137 (633)
|.|.. .......+.+++.|++++|+++++.+..|.++++|+.|+|++|. ++++.+..|.++++|++|+|++ |++++.
T Consensus 18 v~c~~-l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i 96 (239)
T 2xwt_C 18 VTCKD-IQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYI 96 (239)
T ss_dssp EEECS-CSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEE
T ss_pred eEccC-ccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEc
Confidence 55876 22222245589999999999999888899999999999999997 9886667899999999999999 999976
Q ss_pred CcccccCCCCCCEEEccCCcCCCCCccCCCCCCCC---eEeCcCC-cCCccCCcccccCCCCC-eeccCCCCCCCCCcc
Q 006739 138 IPSDLSSLIRLRVLDLSGNSFSGNLGFLKYFPNLE---HLSLAKN-LFTGKVPTSIRTFRNLQ-FFDFSGNSLLEGPIP 211 (633)
Q Consensus 138 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~---~L~l~~N-~l~~~~p~~~~~~~~L~-~l~l~~N~l~~~~~~ 211 (633)
.+..|.++++|+.|+|++|++++.+. +..+++|+ .|++++| ++++..+..|..+++|+ .|++++|++..+|..
T Consensus 97 ~~~~f~~l~~L~~L~l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~ 174 (239)
T 2xwt_C 97 DPDALKELPLLKFLGIFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGY 174 (239)
T ss_dssp CTTSEECCTTCCEEEEEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTT
T ss_pred CHHHhCCCCCCCEEeCCCCCCccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHh
Confidence 67789999999999999999999766 88888888 9999999 99977777899999999 999999999877754
No 271
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=1.3e-18 Score=179.59 Aligned_cols=157 Identities=22% Similarity=0.231 Sum_probs=134.3
Q ss_pred CCCCceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCcccc-CCccccEEEccCCCCCCCCchhccCCCCCcEEEccC
Q 006739 55 CSTPGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIG-RLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQN 131 (633)
Q Consensus 55 C~~~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~ 131 (633)
|.+..+.|........ ..+..++.|+|++|+|++..+..+. ++++|+.|+|++|+|+++.|..|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 6778899987422211 2244689999999999998888888 999999999999999998778899999999999999
Q ss_pred ccCCCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCccc---ccCCCCCeeccCCCCCCC
Q 006739 132 NQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSI---RTFRNLQFFDFSGNSLLE 207 (633)
Q Consensus 132 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~---~~~~~L~~l~l~~N~l~~ 207 (633)
|+|++..+..|..+++|+.|+|++|+|++.. ..+..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|..
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 9999777778999999999999999999885 678999999999999999996444445 679999999999999998
Q ss_pred CCcc
Q 006739 208 GPIP 211 (633)
Q Consensus 208 ~~~~ 211 (633)
+|..
T Consensus 178 l~~~ 181 (361)
T 2xot_A 178 LPLT 181 (361)
T ss_dssp CCHH
T ss_pred cCHH
Confidence 8754
No 272
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.76 E-value=5.3e-18 Score=169.20 Aligned_cols=153 Identities=19% Similarity=0.223 Sum_probs=129.1
Q ss_pred ceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCcc-CC
Q 006739 59 GVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQ-FS 135 (633)
Q Consensus 59 gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~ 135 (633)
.+.|....-... ..+.+++.|++++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|. ++
T Consensus 15 ~~~c~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~ 94 (285)
T 1ozn_A 15 TTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 94 (285)
T ss_dssp EEECCSSCCSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCC
T ss_pred EEEcCcCCcccCCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCcc
Confidence 367765322211 234589999999999999888889999999999999999999778899999999999999997 87
Q ss_pred CCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 136 GTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 136 ~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
...|..|..+++|+.|+|++|.+++.+ ..+..+++|++|++++|++++..+..|..+++|+.|++++|++..++..
T Consensus 95 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 171 (285)
T 1ozn_A 95 SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171 (285)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred ccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHH
Confidence 666888999999999999999999886 5688899999999999999977777788999999999999999876653
No 273
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.76 E-value=9.1e-19 Score=199.18 Aligned_cols=84 Identities=29% Similarity=0.487 Sum_probs=53.6
Q ss_pred CCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeecc
Q 006739 122 KKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDF 200 (633)
Q Consensus 122 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l 200 (633)
++|++|||++|+++|.+|..++++++|+.|+|++|+++|.+ ..++.+++|+.|||++|+++|.+|..+..+++|++|++
T Consensus 632 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~l 711 (768)
T 3rgz_A 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711 (768)
T ss_dssp BCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEEC
T ss_pred ccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEEC
Confidence 44556666666666666666666666666666666666544 45666666666666666666666666666666666666
Q ss_pred CCCCC
Q 006739 201 SGNSL 205 (633)
Q Consensus 201 ~~N~l 205 (633)
++|++
T Consensus 712 s~N~l 716 (768)
T 3rgz_A 712 SNNNL 716 (768)
T ss_dssp CSSEE
T ss_pred cCCcc
Confidence 66666
No 274
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.76 E-value=3.3e-18 Score=169.83 Aligned_cols=153 Identities=18% Similarity=0.144 Sum_probs=134.8
Q ss_pred ceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCC
Q 006739 59 GVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSG 136 (633)
Q Consensus 59 gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 136 (633)
.+.|........ ..+.+++.|++++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++
T Consensus 11 ~~~c~~~~l~~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 90 (276)
T 2z62_A 11 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 90 (276)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred eEEecCCCccccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCc
Confidence 477876422111 234579999999999999888899999999999999999999777799999999999999999998
Q ss_pred CCcccccCCCCCCEEEccCCcCCCCCc-cCCCCCCCCeEeCcCCcCCcc-CCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 137 TIPSDLSSLIRLRVLDLSGNSFSGNLG-FLKYFPNLEHLSLAKNLFTGK-VPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 137 ~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~-~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
..|..|.++++|+.|++++|++++.+. .+..+++|++|++++|++++. +|..|..+++|+.|++++|++..+++.
T Consensus 91 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 888899999999999999999998874 689999999999999999964 699999999999999999999887654
No 275
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.76 E-value=7e-18 Score=168.45 Aligned_cols=171 Identities=21% Similarity=0.189 Sum_probs=140.1
Q ss_pred CCceeeCCCCCCC--CcceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccC
Q 006739 57 TPGVFCERRLSDN--NTYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQF 134 (633)
Q Consensus 57 ~~gv~c~~~~~~~--~~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 134 (633)
...+.|....-.. .....+++.|+|++|.+++..+..|.++++|+.|+|++|.|++ ++.. ..+++|++|+|++|+|
T Consensus 12 l~~l~~~~~~l~~ip~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l 89 (290)
T 1p9a_G 12 HLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQL 89 (290)
T ss_dssp CCEEECTTSCCSSCCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCC
T ss_pred ccEEECCCCCCCcCCCCCCCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcC
Confidence 3456666532111 1124579999999999999988999999999999999999998 4443 8899999999999999
Q ss_pred CCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcccc
Q 006739 135 SGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIPVM 213 (633)
Q Consensus 135 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~~~ 213 (633)
+ .+|..+..+++|+.|+|++|+|++.+ ..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+.+|...
T Consensus 90 ~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~- 167 (290)
T 1p9a_G 90 Q-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGL- 167 (290)
T ss_dssp S-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTT-
T ss_pred C-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHH-
Confidence 9 88999999999999999999999988 67899999999999999999877777899999999999999998777543
Q ss_pred cccCCCCccccccccccccccCCCC
Q 006739 214 RRVGPSGFQYPKRYVLAETTTNGRS 238 (633)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (633)
|..+.++..+....|...
T Consensus 168 -------~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 168 -------LNGLENLDTLLLQENSLY 185 (290)
T ss_dssp -------TTTCTTCCEEECCSSCCC
T ss_pred -------hcCcCCCCEEECCCCcCC
Confidence 334445555555555544
No 276
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.76 E-value=5.7e-18 Score=167.67 Aligned_cols=135 Identities=20% Similarity=0.210 Sum_probs=99.0
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.+++.|++++|.+++. +.+.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 63 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 3677777777777763 36777777777777777777766666777777777777777777666666777777777777
Q ss_pred cCCcCCCCCc-cCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 154 SGNSFSGNLG-FLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 154 ~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
++|++++.++ .+..+++|+.|++++|+|++..+..|..+++|+.|++++|++...++
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCH
Confidence 7777777663 45677777777777777776666666777777777777777766554
No 277
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.76 E-value=9e-18 Score=166.06 Aligned_cols=139 Identities=20% Similarity=0.221 Sum_probs=127.2
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|++++|.++.+.+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|..+++|+.|+
T Consensus 60 l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 45799999999999987777889999999999999999997777889999999999999999987788899999999999
Q ss_pred ccCCcCCCCCc-cCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 153 LSGNSFSGNLG-FLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 153 l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
|++|++++.+. .+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++..+|..
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 199 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEG 199 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHH
Confidence 99999999884 588999999999999999987777899999999999999999877654
No 278
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=2.9e-18 Score=160.16 Aligned_cols=129 Identities=20% Similarity=0.245 Sum_probs=110.7
Q ss_pred EEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCch-hccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccC
Q 006739 77 TKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPP-QIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSG 155 (633)
Q Consensus 77 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 155 (633)
+.|++++|+++. +|..+.. +|+.|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 567788888855 4554533 899999999999886554 488999999999999999988899999999999999999
Q ss_pred CcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCC
Q 006739 156 NSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 156 N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
|+|++.+ ..+..+++|++|+|++|+|++..|..|..+++|+.|+|++|++.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 9999887 4588899999999999999998899999999999999999999653
No 279
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.76 E-value=1.1e-18 Score=176.59 Aligned_cols=133 Identities=24% Similarity=0.357 Sum_probs=86.0
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCC-CCcEEEccCccCCCCC--------------
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCK-KLEILNVQNNQFSGTI-------------- 138 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~-------------- 138 (633)
.+++.|++++|.+++.+|..+.++++|++|+|++|++++.+|..+..++ +|++|+|++|++++.+
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~L 204 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDL 204 (313)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEEC
T ss_pred CCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEEC
Confidence 4566666666666666666666666666666666666655666666665 6666666666555444
Q ss_pred ---------cccccCCCCCCEEEccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCC
Q 006739 139 ---------PSDLSSLIRLRVLDLSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLL 206 (633)
Q Consensus 139 ---------p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~ 206 (633)
|..|..+++|+.|+|++|++++.++.+..+++|++|+|++|+|++.+|..|..+++|+.|+|++|+++
T Consensus 205 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 281 (313)
T 1ogq_A 205 SRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281 (313)
T ss_dssp CSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEE
T ss_pred cCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccc
Confidence 44455555666666666666655555666667777777777777677777777777777777777764
No 280
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.76 E-value=9.3e-18 Score=166.12 Aligned_cols=135 Identities=22% Similarity=0.258 Sum_probs=102.2
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.+++.|++++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 46777888888887777667777888888888888887766666777888888888888887666666777788888888
Q ss_pred cCCcCCCCCc-cCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCC
Q 006739 154 SGNSFSGNLG-FLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 154 ~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
++|++++.++ .+..+++|+.|++++|+|++..|..+..+++|+.|++++|++.+.
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc
Confidence 8888877663 457778888888888888876666677778888888888877543
No 281
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.76 E-value=1.7e-18 Score=178.49 Aligned_cols=158 Identities=19% Similarity=0.238 Sum_probs=135.0
Q ss_pred CCCCCCCceeeCCCCCCCC----cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEE
Q 006739 52 SDPCSTPGVFCERRLSDNN----TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEIL 127 (633)
Q Consensus 52 ~~~C~~~gv~c~~~~~~~~----~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 127 (633)
..+|.|.|+ |+....... ....+++.|++++|++++..+..|.++++|+.|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 467999988 664311111 123489999999999999888899999999999999999999888899999999999
Q ss_pred EccCccCCCCCcccccCCCCCCEEEccCCcCCCCCc--cCCCCCCCCeEeCcCC-cCCccCCcccccCCCCCeeccCCCC
Q 006739 128 NVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLG--FLKYFPNLEHLSLAKN-LFTGKVPTSIRTFRNLQFFDFSGNS 204 (633)
Q Consensus 128 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~l~~L~~L~l~~N-~l~~~~p~~~~~~~~L~~l~l~~N~ 204 (633)
+|++|++++..+..|.++++|++|+|++|++++.+. .+..+++|++|++++| .+++..|..|..+++|+.|++++|+
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 999999995555559999999999999999998875 7889999999999999 4776677889999999999999999
Q ss_pred CCCCCc
Q 006739 205 LLEGPI 210 (633)
Q Consensus 205 l~~~~~ 210 (633)
+...++
T Consensus 186 l~~~~~ 191 (353)
T 2z80_A 186 LQSYEP 191 (353)
T ss_dssp CCEECT
T ss_pred cCccCH
Confidence 976543
No 282
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.74 E-value=6.9e-18 Score=171.71 Aligned_cols=133 Identities=21% Similarity=0.337 Sum_probs=97.2
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccC--------
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSS-------- 144 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-------- 144 (633)
..+++.|+|++|.++ .+|..++++++|++|+|++|.++ .+|..|.++++|++|+|++|++.+.+|..+..
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 346777888888777 56777777788888888888777 36777777777888888777777777776554
Q ss_pred -CCCCCEEEccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCC
Q 006739 145 -LIRLRVLDLSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 145 -l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
+++|+.|+|++|+++..+..+..+++|+.|+|++|++++ +|..+..+++|+.|+|++|++...
T Consensus 181 ~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~ 244 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRN 244 (328)
T ss_dssp ESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCB
T ss_pred cCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhh
Confidence 777777777777777666667777777777777777773 555677777777777777766443
No 283
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=9.6e-18 Score=160.26 Aligned_cols=132 Identities=21% Similarity=0.256 Sum_probs=119.9
Q ss_pred EEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCC
Q 006739 77 TKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGN 156 (633)
Q Consensus 77 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 156 (633)
+.+++++++++.+ |..+. ++|+.|+|++|+|+++.+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~i-P~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTEI-PTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSSC-CSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCcC-CCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 5689999999875 44443 68999999999999977779999999999999999999888999999999999999999
Q ss_pred cCCCCCc-cCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 157 SFSGNLG-FLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 157 ~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
+|+..+. .+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+.++..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH
Confidence 9998884 578999999999999999998899999999999999999999887754
No 284
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.74 E-value=2.8e-18 Score=153.29 Aligned_cols=127 Identities=24% Similarity=0.263 Sum_probs=116.8
Q ss_pred eeeEEEEecCCCCc-ccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 74 LKITKLVFVPRELT-GVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 74 ~~~~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
.+++.|++++|+++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 37999999999999 78888999999999999999999985 7899999999999999999987999888899999999
Q ss_pred ccCCcCCCCC--ccCCCCCCCCeEeCcCCcCCccCC---cccccCCCCCeeccCC
Q 006739 153 LSGNSFSGNL--GFLKYFPNLEHLSLAKNLFTGKVP---TSIRTFRNLQFFDFSG 202 (633)
Q Consensus 153 l~~N~l~~~~--~~~~~l~~L~~L~l~~N~l~~~~p---~~~~~~~~L~~l~l~~ 202 (633)
|++|.+++.+ ..+..+++|+.|++++|++++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999865 788999999999999999997665 5789999999999874
No 285
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.74 E-value=1.1e-17 Score=166.88 Aligned_cols=137 Identities=31% Similarity=0.333 Sum_probs=117.2
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.+++.|+|++|.+++..+. +.+++|+.|+|++|+|+. +|..+..+++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 55 ~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp TTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 4789999999999886443 788999999999999986 7888889999999999999999766778999999999999
Q ss_pred cCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcccc
Q 006739 154 SGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIPVM 213 (633)
Q Consensus 154 ~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~~~ 213 (633)
++|+|++.+ ..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|..+|...+
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~ 192 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFF 192 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhc
Confidence 999999887 457889999999999999996666667889999999999999988776543
No 286
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.74 E-value=1.3e-17 Score=177.24 Aligned_cols=153 Identities=18% Similarity=0.192 Sum_probs=128.6
Q ss_pred CCceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccC
Q 006739 57 TPGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQF 134 (633)
Q Consensus 57 ~~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 134 (633)
+..|.|....-... ....+++.|+|++|++++..+..|.++++|+.|+|++|+|+++.+..|.++++|++|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 45788987422221 2245789999999999999999999999999999999999998889999999999999999999
Q ss_pred CCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCc-CCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 135 SGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNL-FTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 135 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
++..+..|..+++|+.|+|++|.+++.+ ..+..+++|+.|+|++|+ ++...+..|..+++|+.|+|++|++..+|
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 201 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP 201 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc
Confidence 9666667999999999999999999877 468889999999999854 44334446888999999999999988765
No 287
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.74 E-value=7.3e-18 Score=186.97 Aligned_cols=159 Identities=19% Similarity=0.182 Sum_probs=139.9
Q ss_pred CCCCC----CceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcE
Q 006739 53 DPCST----PGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEI 126 (633)
Q Consensus 53 ~~C~~----~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 126 (633)
+||.+ ..|.|....-... ..+.+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 55654 3588876322111 13468999999999999999989999999999999999999988999999999999
Q ss_pred EEccCccCCCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCc-cCCcccccCCCCCeeccCCCC
Q 006739 127 LNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTG-KVPTSIRTFRNLQFFDFSGNS 204 (633)
Q Consensus 127 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~~~~L~~l~l~~N~ 204 (633)
|+|++|++++..|..|+++++|++|+|++|.+++.+ ..++.+++|++|++++|.+++ .+|..|+++++|++|++++|+
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 999999999888999999999999999999999887 679999999999999999986 679999999999999999999
Q ss_pred CCCCCcc
Q 006739 205 LLEGPIP 211 (633)
Q Consensus 205 l~~~~~~ 211 (633)
+...++.
T Consensus 165 l~~~~~~ 171 (606)
T 3vq2_A 165 IQTITVN 171 (606)
T ss_dssp CCEECTT
T ss_pred ceecChh
Confidence 9877654
No 288
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.73 E-value=7.2e-18 Score=180.15 Aligned_cols=159 Identities=21% Similarity=0.279 Sum_probs=136.9
Q ss_pred CCCCCCc--eeeCCCC-CCCCcceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCC-chhccCCCCCcEEE
Q 006739 53 DPCSTPG--VFCERRL-SDNNTYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLL-PPQIVDCKKLEILN 128 (633)
Q Consensus 53 ~~C~~~g--v~c~~~~-~~~~~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~ 128 (633)
..|.|.+ |.|.... ......+.+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3455555 8888742 222234568999999999999999999999999999999999998654 56899999999999
Q ss_pred ccCccCCCCCcccccCCCCCCEEEccCCcCCCCC---ccCCCCCCCCeEeCcCCcCCccCCcc-cccCCCCCeeccCCCC
Q 006739 129 VQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL---GFLKYFPNLEHLSLAKNLFTGKVPTS-IRTFRNLQFFDFSGNS 204 (633)
Q Consensus 129 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~---~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~L~~l~l~~N~ 204 (633)
|++|++++..|..|+++++|++|+|++|++++.. ..+..+++|++|+|++|++++..|.. +..+++|++|++++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999843 34889999999999999999887876 8999999999999999
Q ss_pred CCCCCcc
Q 006739 205 LLEGPIP 211 (633)
Q Consensus 205 l~~~~~~ 211 (633)
+...++.
T Consensus 166 l~~~~~~ 172 (455)
T 3v47_A 166 VKSICEE 172 (455)
T ss_dssp BSCCCTT
T ss_pred ccccChh
Confidence 9877654
No 289
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.73 E-value=2.2e-17 Score=176.02 Aligned_cols=153 Identities=18% Similarity=0.189 Sum_probs=127.3
Q ss_pred CCceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccC
Q 006739 57 TPGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQF 134 (633)
Q Consensus 57 ~~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 134 (633)
+..|.|....-... ..+.+++.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 45788887432211 2345899999999999999999999999999999999999998889999999999999999999
Q ss_pred CCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCC-cCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 135 SGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKN-LFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 135 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N-~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
++..+..|..+++|++|+|++|++++.+ ..+..+++|+.|+|++| .+....+..|..+++|+.|+|++|++..+|
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 212 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP 212 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccc
Confidence 9766777999999999999999999877 46788888888888884 444333346788888888888888887664
No 290
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=1.8e-17 Score=154.74 Aligned_cols=133 Identities=26% Similarity=0.340 Sum_probs=116.7
Q ss_pred CCCCCceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCc-cccCCccccEEEccCCCCCCCCchhccCCCCCcEEEcc
Q 006739 54 PCSTPGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSP-SIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQ 130 (633)
Q Consensus 54 ~C~~~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 130 (633)
.|.|..+.|....-... ....+++.|++++|+|++..+. .|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 7 ~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 7 HCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred EECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 37899999987422211 1234899999999999998775 59999999999999999999889999999999999999
Q ss_pred CccCCCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCC
Q 006739 131 NNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVP 186 (633)
Q Consensus 131 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p 186 (633)
+|+|++..|..|.++++|+.|+|++|+|++.+ ..+..+++|++|+|++|.|++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99999888888999999999999999999885 678999999999999999997655
No 291
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.73 E-value=2e-17 Score=165.00 Aligned_cols=159 Identities=19% Similarity=0.197 Sum_probs=129.4
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCC-CCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNS-LVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVL 151 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 151 (633)
..+++.|++++|.+++..+..|.++++|++|+|++|. ++...|..|..+++|++|+|++|++++..|..|..+++|+.|
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 3478999999999998888889999999999999997 877668889999999999999999997778888899999999
Q ss_pred EccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcccccccCCCCcccccccccc
Q 006739 152 DLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIPVMRRVGPSGFQYPKRYVLA 230 (633)
Q Consensus 152 ~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (633)
+|++|++++.+ ..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|++...++. .|..+.++..+
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~--------~~~~l~~L~~L 206 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH--------AFRDLGRLMTL 206 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT--------TTTTCTTCCEE
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHh--------HccCcccccEe
Confidence 99999998877 4578899999999999999876666788899999999999988765433 33344455555
Q ss_pred ccccCCCCC
Q 006739 231 ETTTNGRSN 239 (633)
Q Consensus 231 ~~~~~~~~~ 239 (633)
....+....
T Consensus 207 ~l~~n~l~~ 215 (285)
T 1ozn_A 207 YLFANNLSA 215 (285)
T ss_dssp ECCSSCCSC
T ss_pred eCCCCcCCc
Confidence 555555443
No 292
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.73 E-value=6.5e-17 Score=155.51 Aligned_cols=133 Identities=23% Similarity=0.257 Sum_probs=118.5
Q ss_pred eeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEcc
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLS 154 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (633)
..+.++.++++++.+ |..+ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 20 s~~~v~c~~~~l~~i-p~~~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHASV-PAGI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcCcc-CCCC--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 456799999998775 4444 3889999999999999889999999999999999999996555678999999999999
Q ss_pred CCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 155 GNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 155 ~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
+|+|++.+ ..+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|..++..
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 99999988 45789999999999999999 8899999999999999999999877654
No 293
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.73 E-value=7.5e-18 Score=169.95 Aligned_cols=153 Identities=20% Similarity=0.246 Sum_probs=132.2
Q ss_pred CCCCCceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCC--CchhccCCCCCcEEEc
Q 006739 54 PCSTPGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDL--LPPQIVDCKKLEILNV 129 (633)
Q Consensus 54 ~C~~~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~L~L 129 (633)
.|.|.+|.|....-... ....+++.|+|++|+++...+..|.++++|+.|+|++|+++.. .|..+..+++|++|+|
T Consensus 6 ~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 38999999987432221 2345899999999999987666789999999999999999852 3678888999999999
Q ss_pred cCccCCCCCcccccCCCCCCEEEccCCcCCCCC--ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCC
Q 006739 130 QNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL--GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLE 207 (633)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~ 207 (633)
++|.++ .+|..+..+++|+.|+|++|++++.+ ..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+..
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 999999 68888999999999999999999877 478899999999999999998888889999999999999999865
No 294
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.72 E-value=2.6e-17 Score=153.69 Aligned_cols=128 Identities=21% Similarity=0.238 Sum_probs=113.0
Q ss_pred EEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCC
Q 006739 77 TKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGN 156 (633)
Q Consensus 77 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 156 (633)
+.+++++|+++.+ |..+. ++|+.|+|++|+|+. +|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKVL-PKGIP--RDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSSC-CSCCC--TTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCcC-CCCCC--CCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4678888888864 44442 589999999999986 7899999999999999999999877888999999999999999
Q ss_pred cCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCC
Q 006739 157 SFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 157 ~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
+|++.+ ..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.|.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 999988 5789999999999999999976666799999999999999999653
No 295
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.72 E-value=3e-17 Score=156.81 Aligned_cols=133 Identities=17% Similarity=0.153 Sum_probs=118.0
Q ss_pred eEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCc-hhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEcc
Q 006739 76 ITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLP-PQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLS 154 (633)
Q Consensus 76 ~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (633)
-+.+++++|+++. +|..+. ..++.|+|++|+|++..| ..|..+++|++|+|++|+|++..+..|.++++|+.|+|+
T Consensus 13 ~~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 3589999999987 455553 457899999999999645 458999999999999999998778899999999999999
Q ss_pred CCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 155 GNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 155 ~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
+|+|++.+ ..+..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|+.+++.
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 99999988 4589999999999999999998899999999999999999999877554
No 296
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.72 E-value=8.5e-18 Score=184.12 Aligned_cols=156 Identities=18% Similarity=0.247 Sum_probs=135.1
Q ss_pred CCCCCceeeCCCCCCCC----cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEc
Q 006739 54 PCSTPGVFCERRLSDNN----TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNV 129 (633)
Q Consensus 54 ~C~~~gv~c~~~~~~~~----~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 129 (633)
.|.|.|+ |+....... ....+++.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5999999 875321111 12347999999999999999999999999999999999999988899999999999999
Q ss_pred cCccCCCCCcccccCCCCCCEEEccCCcCCCC--CccCCCCCCCCeEeCcCCcCCccCC-cccccCCCCCeeccCCCCCC
Q 006739 130 QNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGN--LGFLKYFPNLEHLSLAKNLFTGKVP-TSIRTFRNLQFFDFSGNSLL 206 (633)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~L~~l~l~~N~l~ 206 (633)
++|++++..|..|+++++|++|+|++|.+++. +..+.++++|++|++++|++.+.+| ..|..+++|+.|++++|++.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 99999987777799999999999999999964 4678999999999999999555555 68999999999999999997
Q ss_pred CCCc
Q 006739 207 EGPI 210 (633)
Q Consensus 207 ~~~~ 210 (633)
...+
T Consensus 162 ~~~~ 165 (549)
T 2z81_A 162 NYQS 165 (549)
T ss_dssp EECT
T ss_pred ccCh
Confidence 6443
No 297
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.71 E-value=3e-17 Score=176.41 Aligned_cols=155 Identities=17% Similarity=0.186 Sum_probs=136.8
Q ss_pred CCceeeCCCCCCC--CcceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccC
Q 006739 57 TPGVFCERRLSDN--NTYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQF 134 (633)
Q Consensus 57 ~~gv~c~~~~~~~--~~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 134 (633)
|..|.|....-.. ...+.+++.|+|++|++++..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|++
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 5679998742221 12345899999999999999999999999999999999999998899999999999999999999
Q ss_pred CCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 135 SGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 135 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
++..+..|.++++|+.|+|++|++++.+ ..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++..++..
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred CccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 9655567899999999999999999876 6789999999999999999988899999999999999999999887754
No 298
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=4.3e-17 Score=150.14 Aligned_cols=128 Identities=20% Similarity=0.186 Sum_probs=99.0
Q ss_pred EEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcC
Q 006739 79 LVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSF 158 (633)
Q Consensus 79 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 158 (633)
+++++|+++.. |..+ .++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 12 l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 88 (177)
T 2o6r_A 12 IRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL 88 (177)
T ss_dssp EECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCc
Confidence 33344455543 3322 36788899999988886666778888999999999999866666678888999999999998
Q ss_pred CCCCc-cCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 159 SGNLG-FLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 159 ~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
++.++ .+..+++|++|+|++|+|++..+..+..+++|+.|+|++|++.+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 89 QSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 88774 4678889999999999998666666788889999999999886654
No 299
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=1.1e-16 Score=147.28 Aligned_cols=133 Identities=20% Similarity=0.300 Sum_probs=115.2
Q ss_pred CCCCCceeeCCCCCCC--CcceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccC
Q 006739 54 PCSTPGVFCERRLSDN--NTYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQN 131 (633)
Q Consensus 54 ~C~~~gv~c~~~~~~~--~~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~ 131 (633)
.|+|.++.|....-.. .....+++.|++++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 6 ~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp EEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3789999998742211 12245899999999999998888899999999999999999997777789999999999999
Q ss_pred ccCCCCCcccccCCCCCCEEEccCCcCCCCCc-cCCCCCCCCeEeCcCCcCCccCC
Q 006739 132 NQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLG-FLKYFPNLEHLSLAKNLFTGKVP 186 (633)
Q Consensus 132 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p 186 (633)
|+|++..+..+..+++|+.|+|++|+|++.+. .+..+++|+.|+|++|.+++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99997777778999999999999999998885 46889999999999999997655
No 300
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.70 E-value=3.8e-17 Score=180.43 Aligned_cols=138 Identities=16% Similarity=0.156 Sum_probs=125.7
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.+++.|++++|.+..+.+..|.++++|+.|+|++|.|++..|..|..+++|++|+|++|.|++..|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 46789999999999887777899999999999999999987889999999999999999999888888999999999999
Q ss_pred cCCcCCCCCcc-CCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 154 SGNSFSGNLGF-LKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 154 ~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
++|.|++.++. +..+++|++|+|++|.|++..|..|..+++|+.|+|++|.+...+..
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 189 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLS 189 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGG
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChh
Confidence 99999988854 68999999999999999998888999999999999999999877643
No 301
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.70 E-value=7.9e-17 Score=159.86 Aligned_cols=139 Identities=19% Similarity=0.200 Sum_probs=124.8
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|++++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..+..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 34799999999999998888999999999999999999998778999999999999999999977777899999999999
Q ss_pred ccCCcCCC--CCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCC----eeccCCCCCCCCCcc
Q 006739 153 LSGNSFSG--NLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQ----FFDFSGNSLLEGPIP 211 (633)
Q Consensus 153 l~~N~l~~--~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~----~l~l~~N~l~~~~~~ 211 (633)
|++|.+++ .+..+..+++|+.|+|++|++++..+..+..+++|+ .|++++|++..++..
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~ 195 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPG 195 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTT
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCcc
Confidence 99999987 457889999999999999999988778887777777 899999999877654
No 302
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.70 E-value=4.6e-17 Score=173.87 Aligned_cols=137 Identities=20% Similarity=0.174 Sum_probs=124.1
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.+++.|++++|.+++.+|..+.++++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 37899999999999999999999999999999999999988889999999999999999999888889999999999999
Q ss_pred cCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 154 SGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 154 ~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
++|++++.+ ..+..+++|++|+|++|+|++..+..|..+++|+.|++++|++.+..+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999885 678899999999999999997666778899999999999999976543
No 303
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.70 E-value=2e-16 Score=161.46 Aligned_cols=153 Identities=19% Similarity=0.252 Sum_probs=133.2
Q ss_pred CCCCceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCc
Q 006739 55 CSTPGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNN 132 (633)
Q Consensus 55 C~~~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 132 (633)
|.|..+.|....-... ....+++.|++++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 7899999986422111 12357999999999999988889999999999999999999988999999999999999999
Q ss_pred cCCCCCcccccCCCCCCEEEccCCcCCCCCc-cCCCCCCCCeEeCcCCcCC--ccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 133 QFSGTIPSDLSSLIRLRVLDLSGNSFSGNLG-FLKYFPNLEHLSLAKNLFT--GKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 133 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~--~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
+++ .+|..+. ++|++|+|++|++++.+. .+..+++|+.|++++|.++ +..|..+..+ +|+.|++++|++..+|
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~ 188 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIP 188 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCC
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccC
Confidence 999 7887765 799999999999998884 5899999999999999996 4778888888 9999999999998877
Q ss_pred cc
Q 006739 210 IP 211 (633)
Q Consensus 210 ~~ 211 (633)
..
T Consensus 189 ~~ 190 (332)
T 2ft3_A 189 KD 190 (332)
T ss_dssp SS
T ss_pred cc
Confidence 54
No 304
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.70 E-value=5.7e-17 Score=169.46 Aligned_cols=138 Identities=16% Similarity=0.160 Sum_probs=126.4
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|++++|.++...+..|.++++|+.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 35789999999999987766789999999999999999997778999999999999999999988888899999999999
Q ss_pred ccCCcCCCCCcc-CCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 153 LSGNSFSGNLGF-LKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 153 l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
|++|.++..+.. +..+++|++|++++|++++..|..|..+++|+.|++++|++...+.
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 182 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL 182 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCG
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcccc
Confidence 999999988854 6899999999999999998888889999999999999999987654
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.69 E-value=3.7e-17 Score=164.83 Aligned_cols=138 Identities=20% Similarity=0.242 Sum_probs=117.4
Q ss_pred eeeEEEEecCCCCcccCC-ccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCC-CCcccccCCCCCCEE
Q 006739 74 LKITKLVFVPRELTGVLS-PSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSG-TIPSDLSSLIRLRVL 151 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L 151 (633)
.+++.|++++|++++..+ ..+.++++|+.|+|++|.+++..|..|..+++|++|+|++|.+++ .+|..+..+++|+.|
T Consensus 101 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 101 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp TTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 368889999999888765 578888999999999999988888888889999999999999886 578888889999999
Q ss_pred EccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 152 DLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 152 ~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
+|++|++++.+ ..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++...++.
T Consensus 181 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 241 (306)
T 2z66_A 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ 241 (306)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSS
T ss_pred ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHH
Confidence 99999998875 6788889999999999999877777788889999999999988766544
No 306
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.69 E-value=1.2e-16 Score=162.92 Aligned_cols=155 Identities=17% Similarity=0.238 Sum_probs=134.4
Q ss_pred CCCCCceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccC
Q 006739 54 PCSTPGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQN 131 (633)
Q Consensus 54 ~C~~~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~ 131 (633)
.|.+..+.|....-... ....+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 47899999986322211 1245789999999999998888999999999999999999998899999999999999999
Q ss_pred ccCCCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCc--cCCcccccCCCCCeeccCCCCCCCC
Q 006739 132 NQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTG--KVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 132 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
|+++ .+|..+. ++|+.|++++|++++.+ ..+..+++|+.|++++|.++. ..+..+..+++|+.|++++|.+..+
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l 186 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI 186 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccC
Confidence 9999 7787765 79999999999999887 468899999999999999963 7788899999999999999999877
Q ss_pred Ccc
Q 006739 209 PIP 211 (633)
Q Consensus 209 ~~~ 211 (633)
|..
T Consensus 187 ~~~ 189 (330)
T 1xku_A 187 PQG 189 (330)
T ss_dssp CSS
T ss_pred Ccc
Confidence 653
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.69 E-value=4e-17 Score=165.01 Aligned_cols=134 Identities=25% Similarity=0.270 Sum_probs=97.8
Q ss_pred eeEEEEecCCCCcccCCccc--cCCccccEEEccCCCCCCCCchhccCC-----CCCcEEEccCccCCCCCcccccCCCC
Q 006739 75 KITKLVFVPRELTGVLSPSI--GRLSELRELSLANNSLVDLLPPQIVDC-----KKLEILNVQNNQFSGTIPSDLSSLIR 147 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~--~~l~~L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~ 147 (633)
+++.|+|++|++++.+|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.+++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 67788888888887777765 7788888888888888775 7777666 78888888888888766677888888
Q ss_pred CCEEEccCCcCCCC---CccC--CCCCCCCeEeCcCCcCCc--cCC-cccccCCCCCeeccCCCCCCCCC
Q 006739 148 LRVLDLSGNSFSGN---LGFL--KYFPNLEHLSLAKNLFTG--KVP-TSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 148 L~~L~l~~N~l~~~---~~~~--~~l~~L~~L~l~~N~l~~--~~p-~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
|+.|+|++|++.+. +..+ ..+++|++|+|++|+|++ .++ ..+..+++|+.|++++|++...+
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAA 244 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCccc
Confidence 88888888887664 2233 677788888888888773 122 33456677888888888776644
No 308
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.68 E-value=1.1e-16 Score=180.08 Aligned_cols=157 Identities=22% Similarity=0.177 Sum_probs=135.7
Q ss_pred CCCCceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCc
Q 006739 55 CSTPGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNN 132 (633)
Q Consensus 55 C~~~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 132 (633)
|.+..|.|....-... ..+.+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 4455578876322211 12458999999999999988888999999999999999999988999999999999999999
Q ss_pred cCCCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 133 QFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 133 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
++++..+..|+++++|++|+|++|++++.+ ..+..+++|++|+|++|.+++..|..+..+++|+.|++++|.+...++.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 999554557999999999999999999887 5789999999999999999998898899999999999999999877654
No 309
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.68 E-value=1.5e-17 Score=184.89 Aligned_cols=140 Identities=18% Similarity=0.267 Sum_probs=128.7
Q ss_pred CcceeeeEEEEecCCCCccc-----------------CCcccc--CCccccEEEccCCCCCCCCchhccCCCCCcEEEcc
Q 006739 70 NTYVLKITKLVFVPRELTGV-----------------LSPSIG--RLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQ 130 (633)
Q Consensus 70 ~~~~~~~~~L~l~~n~l~~~-----------------~~~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 130 (633)
.....+++.|+|++|.+++. +|+.++ ++++|++|+|++|++.+.+|..|+++++|++|+|+
T Consensus 202 l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 281 (636)
T 4eco_A 202 VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVA 281 (636)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECT
T ss_pred HhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECc
Confidence 33455899999999999996 899988 99999999999999999999999999999999999
Q ss_pred Ccc-CCC-CCcccccCC------CCCCEEEccCCcCCCCCc--cCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeecc
Q 006739 131 NNQ-FSG-TIPSDLSSL------IRLRVLDLSGNSFSGNLG--FLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDF 200 (633)
Q Consensus 131 ~N~-l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~~--~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l 200 (633)
+|+ ++| .+|..++.+ ++|+.|+|++|+++..+. .+..+++|+.|++++|+++|.+| .|+.+++|+.|++
T Consensus 282 ~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L 360 (636)
T 4eco_A 282 CNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNL 360 (636)
T ss_dssp TCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEEC
T ss_pred CCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEEC
Confidence 998 998 899998887 999999999999997777 89999999999999999999999 8999999999999
Q ss_pred CCCCCCCCCc
Q 006739 201 SGNSLLEGPI 210 (633)
Q Consensus 201 ~~N~l~~~~~ 210 (633)
++|++..+|.
T Consensus 361 ~~N~l~~lp~ 370 (636)
T 4eco_A 361 AYNQITEIPA 370 (636)
T ss_dssp CSSEEEECCT
T ss_pred CCCccccccH
Confidence 9999986654
No 310
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.68 E-value=3.7e-17 Score=168.82 Aligned_cols=136 Identities=22% Similarity=0.200 Sum_probs=122.2
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|+|++|+|+++.+..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 142 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEE
Confidence 34799999999999999888999999999999999999997777899999999999999999988899999999999999
Q ss_pred ccCCcCCCCCcc-C---CCCCCCCeEeCcCCcCCccCCcccccCCC--CCeeccCCCCCCCC
Q 006739 153 LSGNSFSGNLGF-L---KYFPNLEHLSLAKNLFTGKVPTSIRTFRN--LQFFDFSGNSLLEG 208 (633)
Q Consensus 153 l~~N~l~~~~~~-~---~~l~~L~~L~l~~N~l~~~~p~~~~~~~~--L~~l~l~~N~l~~~ 208 (633)
|++|+|++.+.. + ..+++|+.|+|++|+|++..+..+..+++ |+.|+|++|++.|-
T Consensus 143 L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 143 LSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 999999998844 3 67999999999999999766677888887 48999999999763
No 311
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.68 E-value=6.8e-16 Score=146.12 Aligned_cols=134 Identities=20% Similarity=0.174 Sum_probs=116.5
Q ss_pred eeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEcc
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLS 154 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (633)
.-+.++.++++++.+. ..+ .++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 8 ~~~~v~c~~~~l~~~p-~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 8 SGTTVECYSQGRTSVP-TGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp ETTEEECCSSCCSSCC-SCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEecCCCccCCC-CCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECC
Confidence 3457889999988753 333 4689999999999999777778999999999999999996666678999999999999
Q ss_pred CCcCCCCCc-cCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 155 GNSFSGNLG-FLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 155 ~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
+|++++.+. .+..+++|++|+|++|+|++..+..|..+++|+.|++++|++..++..
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 142 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG 142 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH
Confidence 999998884 578999999999999999987777789999999999999999877654
No 312
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.68 E-value=1.7e-16 Score=174.62 Aligned_cols=153 Identities=18% Similarity=0.158 Sum_probs=134.9
Q ss_pred ceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCC
Q 006739 59 GVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSG 136 (633)
Q Consensus 59 gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 136 (633)
-+.|........ ..+.+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++
T Consensus 11 ~~~c~~~~l~~ip~~l~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~ 90 (570)
T 2z63_A 11 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 90 (570)
T ss_dssp EEECCSSCCSSCCSSSCSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred EEEeCCCCccccCCCccccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCc
Confidence 367765321111 234579999999999999988899999999999999999999878899999999999999999998
Q ss_pred CCcccccCCCCCCEEEccCCcCCCCCc-cCCCCCCCCeEeCcCCcCCc-cCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 137 TIPSDLSSLIRLRVLDLSGNSFSGNLG-FLKYFPNLEHLSLAKNLFTG-KVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 137 ~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~-~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
..|..|.++++|++|+|++|++++.+. .++.+++|++|++++|.+++ .+|..|+++++|+.|++++|++...++.
T Consensus 91 ~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~ 167 (570)
T 2z63_A 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (570)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGG
T ss_pred cCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHH
Confidence 888899999999999999999999874 68999999999999999997 4799999999999999999999877654
No 313
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.68 E-value=1e-16 Score=177.73 Aligned_cols=155 Identities=19% Similarity=0.094 Sum_probs=132.1
Q ss_pred CCceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccC
Q 006739 57 TPGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQF 134 (633)
Q Consensus 57 ~~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 134 (633)
+..+.|....-... ..+.+++.|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 34578877422221 2345799999999999999999999999999999999999998899999999999999999999
Q ss_pred CCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 135 SGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 135 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
++..|..|+++++|++|+|++|++++.. ..+..+++|++|++++|++++..+..+..+++|+.|++++|++...++.
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 171 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKE 171 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChh
Confidence 9888999999999999999999999874 6788999999999999999974434445589999999999999776553
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.68 E-value=2.8e-16 Score=167.54 Aligned_cols=134 Identities=20% Similarity=0.198 Sum_probs=88.7
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|+|++|+++++.+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|+...+..|..+++|+.|+
T Consensus 98 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 45789999999999998888999999999999999999987777788999999999999999855554565555555555
Q ss_pred ccCC-cCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCC
Q 006739 153 LSGN-SFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 153 l~~N-~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
|++| .++..+ ..+..+++|++|+|++|+|++ +| .+..+++|+.|+|++|++..+
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEE
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCccc
Confidence 5552 233222 234444444444444444442 22 234444444444444444333
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.67 E-value=8e-17 Score=162.80 Aligned_cols=155 Identities=17% Similarity=0.142 Sum_probs=126.9
Q ss_pred eeeeEEEEecCCCCcccCCccccCC-----ccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCC--Ccccc--c
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRL-----SELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGT--IPSDL--S 143 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~--~ 143 (633)
..+++.|+|++|++++. |..++.+ ++|++|+|++|+|++..|..|..+++|++|+|++|++.+. +|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 44899999999999998 7778877 8999999999999998889999999999999999999865 34455 8
Q ss_pred CCCCCCEEEccCCcCCCCC----ccCCCCCCCCeEeCcCCcCCccCC-cccccCCCCCeeccCCCCCCCCCcccccccCC
Q 006739 144 SLIRLRVLDLSGNSFSGNL----GFLKYFPNLEHLSLAKNLFTGKVP-TSIRTFRNLQFFDFSGNSLLEGPIPVMRRVGP 218 (633)
Q Consensus 144 ~l~~L~~L~l~~N~l~~~~----~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~ 218 (633)
.+++|+.|+|++|+|++.+ ..+..+++|+.|+|++|+|++..| ..+..+++|+.|+|++|+|+.+|....
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~----- 273 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP----- 273 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSCC-----
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhcc-----
Confidence 8999999999999999644 334678999999999999998775 456678999999999999987764321
Q ss_pred CCccccccccccccccCCCCC
Q 006739 219 SGFQYPKRYVLAETTTNGRSN 239 (633)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~ 239 (633)
.++..+..+.|....
T Consensus 274 ------~~L~~L~Ls~N~l~~ 288 (312)
T 1wwl_A 274 ------AKLSVLDLSYNRLDR 288 (312)
T ss_dssp ------SEEEEEECCSSCCCS
T ss_pred ------CCceEEECCCCCCCC
Confidence 345555555555443
No 316
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=2.6e-17 Score=184.90 Aligned_cols=182 Identities=20% Similarity=0.211 Sum_probs=117.8
Q ss_pred CCChhHHHHHHHHHHhcCC-----CCCCCCC--CCCCCCceeeCCCCCCCC---------cceeeeEEEEecCCCCcc--
Q 006739 27 NLDRSDYKALSVILRDLGG-----QQLFIPS--DPCSTPGVFCERRLSDNN---------TYVLKITKLVFVPRELTG-- 88 (633)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~-----~~~w~~~--~~C~~~gv~c~~~~~~~~---------~~~~~~~~L~l~~n~l~~-- 88 (633)
+....+..+|+++..+... ...|... ..+.|.++.+........ .....+..++|+.|.|.+
T Consensus 128 s~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~ 207 (727)
T 4b8c_D 128 SLVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDD 207 (727)
T ss_dssp ----CCCHHHHHHHHHHHHHHTTC--------------------------------------------------------
T ss_pred hccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcc
Confidence 4567788899999877643 2235222 446777766655211000 001123455566655544
Q ss_pred -------cCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCC
Q 006739 89 -------VLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGN 161 (633)
Q Consensus 89 -------~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 161 (633)
.++..+..++.|+.|+|++|.|.. +|..+.++++|++|+|++|.|+ .+|..|++|++|+.|+|++|+|+.+
T Consensus 208 ~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~l 285 (727)
T 4b8c_D 208 DIENRMVMPKDSKYDDQLWHALDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSL 285 (727)
T ss_dssp --------------CCCCCCEEECTTSCCSC-CCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSC
T ss_pred ccccceecChhhhccCCCCcEEECCCCCCCC-CChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCcc
Confidence 346678999999999999999986 7888889999999999999999 9999999999999999999999988
Q ss_pred CccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 162 LGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 162 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
+..+..+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|+..++.
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 888999999999999999998 7898999999999999999999765544
No 317
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.67 E-value=3.3e-18 Score=173.89 Aligned_cols=153 Identities=12% Similarity=0.105 Sum_probs=103.1
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhH------H--HHHHHHHHHHHHHHHHHHhhcCCC
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTE------E--DSKLLNKKMRQIRSEINTVGQIRH 408 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~e~~~l~~l~h 408 (633)
.-|++.+.||+|++|.||+|... +|+.||||+++........... . .........-...+|...+.++.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~--~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~ 172 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADE--KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE 172 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECT--TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEecCEeeeCCceEEEEEECC--CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh
Confidence 34889999999999999999864 7999999987643211100000 0 000011112233457777777755
Q ss_pred CcccccceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeE
Q 006739 409 RNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVL 488 (633)
Q Consensus 409 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nil 488 (633)
.++....-+.. ...++||||++|++|.++... .....++.|++.+|.|| |+.+||||||||.|||
T Consensus 173 ~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~l---H~~gIVHrDLKp~NIL 237 (397)
T 4gyi_A 173 EGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRL---AKHGLIHGDFNEFNIL 237 (397)
T ss_dssp TTCSCCCEEEE--ETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEE
T ss_pred cCCCCCeeeec--cCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHEE
Confidence 55432222222 234799999999888654321 12356889999999999 5678999999999999
Q ss_pred ecCCC----------ceEEccccccccc
Q 006739 489 LDDDM----------EARIADFGLAKAM 506 (633)
Q Consensus 489 l~~~~----------~~kl~DfG~a~~~ 506 (633)
+++++ .+.|+||+-+...
T Consensus 238 l~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 238 IREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred EeCCCCcccccccccceEEEEeCCcccC
Confidence 99876 3899999977654
No 318
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.66 E-value=1.1e-16 Score=150.13 Aligned_cols=130 Identities=18% Similarity=0.297 Sum_probs=106.1
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.+++.|++++|+++. +| .+..+++|+.|+|++|.++. + ..+..+++|++|+|++|++++..|..++.+++|+.|+|
T Consensus 44 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~-~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATN-Y-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSC-C-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCc-c-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 368888999988885 34 68888889999999997765 3 47888899999999999998777888888899999999
Q ss_pred cCCcCCCCC-ccCCCCCCCCeEeCcCCc-CCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 154 SGNSFSGNL-GFLKYFPNLEHLSLAKNL-FTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 154 ~~N~l~~~~-~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
++|++++.. ..+..+++|+.|++++|+ ++ .+| .+..+++|+.|++++|++..++
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~ 175 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR 175 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH
Confidence 999888743 667888899999999998 55 565 6888888999999999887654
No 319
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.66 E-value=2.1e-16 Score=181.60 Aligned_cols=140 Identities=19% Similarity=0.206 Sum_probs=125.5
Q ss_pred ceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCC-chhccCCCCCcEEEccCccCCCCCcccccCCCCCCE
Q 006739 72 YVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLL-PPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRV 150 (633)
Q Consensus 72 ~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 150 (633)
.+.+++.|+|++|.|++..+..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|+|++..|..|.++++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 4568999999999999999999999999999999999666555 789999999999999999999888999999999999
Q ss_pred EEccCCcCCCCC-c--cCCCCCCCCeEeCcCCcCCccCC-cccccCCCCCeeccCCCCCCCCCcc
Q 006739 151 LDLSGNSFSGNL-G--FLKYFPNLEHLSLAKNLFTGKVP-TSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 151 L~l~~N~l~~~~-~--~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
|+|++|.+++.. . .+.++++|++|+|++|.+++..+ ..|+++++|+.|+|++|.+....+.
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~ 166 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSG
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHH
Confidence 999999999843 3 48999999999999999997755 5799999999999999999776543
No 320
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=3.3e-16 Score=146.18 Aligned_cols=128 Identities=21% Similarity=0.263 Sum_probs=112.1
Q ss_pred CCCCceeeCCCCCCCC--cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCc
Q 006739 55 CSTPGVFCERRLSDNN--TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNN 132 (633)
Q Consensus 55 C~~~gv~c~~~~~~~~--~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 132 (633)
|.+..|.|....-... ....+++.|+|++|+|+. +|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 6788889987422111 124579999999999985 6688999999999999999999988889999999999999999
Q ss_pred cCCCCCcccccCCCCCCEEEccCCcCCCCCc-cCCCCCCCCeEeCcCCcCCc
Q 006739 133 QFSGTIPSDLSSLIRLRVLDLSGNSFSGNLG-FLKYFPNLEHLSLAKNLFTG 183 (633)
Q Consensus 133 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~ 183 (633)
+|++..|..|..+++|+.|+|++|+|++.+. .+..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9998888889999999999999999999884 68899999999999999974
No 321
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.66 E-value=3.3e-16 Score=146.85 Aligned_cols=130 Identities=20% Similarity=0.292 Sum_probs=114.7
Q ss_pred ceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEE
Q 006739 72 YVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVL 151 (633)
Q Consensus 72 ~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 151 (633)
...+++.|++++|.++.. +.+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..++.+++|+.|
T Consensus 64 ~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L 141 (197)
T 4ezg_A 64 YAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSI 141 (197)
T ss_dssp GCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEE
T ss_pred cCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEE
Confidence 345899999999977653 579999999999999999998778899999999999999999998889999999999999
Q ss_pred EccCCc-CCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCC
Q 006739 152 DLSGNS-FSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLL 206 (633)
Q Consensus 152 ~l~~N~-l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~ 206 (633)
+|++|. ++..+ .+..+++|+.|++++|.+++ ++ .+..+++|+.|++++|+|.
T Consensus 142 ~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 142 DLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp ECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred EccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 999998 66654 78899999999999999995 44 7899999999999999984
No 322
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=7.9e-17 Score=182.59 Aligned_cols=138 Identities=20% Similarity=0.247 Sum_probs=124.2
Q ss_pred cceeeeEEEEecCCCCcc-----------------cCCcccc--CCccccEEEccCCCCCCCCchhccCCCCCcEEEccC
Q 006739 71 TYVLKITKLVFVPRELTG-----------------VLSPSIG--RLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQN 131 (633)
Q Consensus 71 ~~~~~~~~L~l~~n~l~~-----------------~~~~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~ 131 (633)
....+++.|+|++|.|++ .+|+.++ ++++|+.|+|++|++.+.+|..|.++++|+.|+|++
T Consensus 445 ~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~ 524 (876)
T 4ecn_A 445 QRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIAC 524 (876)
T ss_dssp GGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTT
T ss_pred hcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcC
Confidence 335589999999999999 4888877 999999999999999999999999999999999999
Q ss_pred cc-CCC-CCcccccCCC-------CCCEEEccCCcCCCCCc--cCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeecc
Q 006739 132 NQ-FSG-TIPSDLSSLI-------RLRVLDLSGNSFSGNLG--FLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDF 200 (633)
Q Consensus 132 N~-l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~~--~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l 200 (633)
|+ |+| .+|..++.++ +|+.|+|++|+++..+. .+.++++|+.|+|++|+|+ .+| .|+.+++|+.|+|
T Consensus 525 N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~L 602 (876)
T 4ecn_A 525 NRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKL 602 (876)
T ss_dssp CTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEEC
T ss_pred CCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEEC
Confidence 98 998 8898777665 99999999999997777 7999999999999999999 888 8999999999999
Q ss_pred CCCCCCCCCc
Q 006739 201 SGNSLLEGPI 210 (633)
Q Consensus 201 ~~N~l~~~~~ 210 (633)
++|++..+|.
T Consensus 603 s~N~l~~lp~ 612 (876)
T 4ecn_A 603 DYNQIEEIPE 612 (876)
T ss_dssp CSSCCSCCCT
T ss_pred cCCccccchH
Confidence 9999986653
No 323
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.65 E-value=6.7e-16 Score=163.94 Aligned_cols=134 Identities=24% Similarity=0.273 Sum_probs=90.4
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|+|++|+++++.+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 87 l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 166 (440)
T 3zyj_A 87 LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLD 166 (440)
T ss_dssp CSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeC
Confidence 45788889999888888778888888888899988888886666788888888888888888855555666666666666
Q ss_pred ccCC-cCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCC
Q 006739 153 LSGN-SFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 153 l~~N-~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
|++| .++..+ ..+..+++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|+.+
T Consensus 167 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 167 LGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp CCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEE
T ss_pred CCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCcc
Confidence 6663 333322 23555555555555555555 333 244455555555555555444
No 324
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.65 E-value=6.1e-16 Score=170.81 Aligned_cols=110 Identities=16% Similarity=0.195 Sum_probs=79.8
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.+++.|+|++|.+++..+..|+++++|+.|+|++|.|++..|..|+++++|++|+|++|.|++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 46778888888888777777788888888888888887766667777777777777777777444444577777777777
Q ss_pred cCCcCCCCC-ccCCCCCCCCeEeCcCCcCCc
Q 006739 154 SGNSFSGNL-GFLKYFPNLEHLSLAKNLFTG 183 (633)
Q Consensus 154 ~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~ 183 (633)
++|.+++.+ ..+..+++|+.|+|++|.|++
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 777777665 346666666666666666653
No 325
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.65 E-value=3.7e-16 Score=174.11 Aligned_cols=131 Identities=16% Similarity=0.203 Sum_probs=115.7
Q ss_pred EEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCc
Q 006739 78 KLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNS 157 (633)
Q Consensus 78 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 157 (633)
..+-++.+++.+ |..+. +++++|||++|+|+++.|..|.++++|++|||++|+|++..|..|.+|++|++|+|++|+
T Consensus 35 ~~~c~~~~l~~v-P~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 35 TYQCMELNFYKI-PDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EEECTTSCCSSC-CSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEECCCCCcCcc-CCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 346777788764 44442 479999999999999777899999999999999999997777889999999999999999
Q ss_pred CCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 158 FSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 158 l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
|++.+ ..|.++++|++|+|++|+|++..+..|+.+++|++|+|++|.+..++.+
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~ 166 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLP 166 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCC
T ss_pred CCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCc
Confidence 99988 5689999999999999999987777899999999999999999887654
No 326
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.65 E-value=1.3e-16 Score=146.71 Aligned_cols=128 Identities=20% Similarity=0.195 Sum_probs=112.0
Q ss_pred eeEEEEecCCCCcccCCccccCCc-cccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLS-ELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
+++.|++++|+++.+ + .+..+. +|+.|+|++|.|++. ..|..+++|++|+|++|+|++..|..+..+++|+.|+|
T Consensus 20 ~L~~L~l~~n~l~~i-~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 20 RDRELDLRGYKIPVI-E-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp SCEEEECTTSCCCSC-C-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CceEEEeeCCCCchh-H-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 789999999999975 4 465655 999999999999984 68999999999999999999554455689999999999
Q ss_pred cCCcCCCCCc--cCCCCCCCCeEeCcCCcCCccCCcc----cccCCCCCeeccCCCCCCC
Q 006739 154 SGNSFSGNLG--FLKYFPNLEHLSLAKNLFTGKVPTS----IRTFRNLQFFDFSGNSLLE 207 (633)
Q Consensus 154 ~~N~l~~~~~--~~~~l~~L~~L~l~~N~l~~~~p~~----~~~~~~L~~l~l~~N~l~~ 207 (633)
++|+|+..+. .+..+++|+.|++++|.++ .+|.. +..+++|+.||+++|.+.+
T Consensus 96 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 96 TNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 9999988775 7889999999999999998 56764 8999999999999998744
No 327
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.64 E-value=1.9e-16 Score=159.96 Aligned_cols=133 Identities=21% Similarity=0.180 Sum_probs=102.6
Q ss_pred eeEEEEecCCCCcccCCccc--cCCccccEEEccCCCCCCCCc----hhccCCCCCcEEEccCccCCCCCcccccCCCCC
Q 006739 75 KITKLVFVPRELTGVLSPSI--GRLSELRELSLANNSLVDLLP----PQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRL 148 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~--~~l~~L~~L~l~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 148 (633)
+++.|++++|++++..|..+ .++++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..|+.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 58888999998888888877 888888888888888887554 345568888888888888887777888888888
Q ss_pred CEEEccCCcCCCC---C--ccCCCCCCCCeEeCcCCcCCccCCc----ccccCCCCCeeccCCCCCCCC
Q 006739 149 RVLDLSGNSFSGN---L--GFLKYFPNLEHLSLAKNLFTGKVPT----SIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 149 ~~L~l~~N~l~~~---~--~~~~~l~~L~~L~l~~N~l~~~~p~----~~~~~~~L~~l~l~~N~l~~~ 208 (633)
++|+|++|++.+. + ..+..+++|++|+|++|+|+ .++. .++.+++|++|+|++|++...
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 239 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRAT 239 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCcc
Confidence 8888888887652 2 22357778888888888886 3333 246678888888888887665
No 328
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.63 E-value=4.6e-16 Score=167.15 Aligned_cols=138 Identities=17% Similarity=0.157 Sum_probs=126.9
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|+|++|.+++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|..+++|+.|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 45899999999999999999999999999999999999986666789999999999999999988899999999999999
Q ss_pred ccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 153 LSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 153 l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
|++|.+++.. ..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+..++.
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~ 193 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRD 193 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECT
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeCh
Confidence 9999999876 578999999999999999997777779999999999999999977654
No 329
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.63 E-value=1.5e-15 Score=153.06 Aligned_cols=127 Identities=20% Similarity=0.309 Sum_probs=93.3
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.+++.|++++|.+++..+ +.++++|+.|+|++|++++ ++ .+..+++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 467788888888777544 7777888888888888776 34 57777888888888888874 443 777778888888
Q ss_pred cCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 154 SGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 154 ~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
++|.+++.++ +..+++|+.|++++|++++. +. +..+++|+.|++++|++..++
T Consensus 137 ~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~ 189 (308)
T 1h6u_A 137 DLNQITNISP-LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDIS 189 (308)
T ss_dssp CSSCCCCCGG-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCG
T ss_pred CCCccCcCcc-ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcCh
Confidence 8887776655 66777778888888877743 33 777777777777777776654
No 330
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.63 E-value=9.7e-16 Score=153.01 Aligned_cols=128 Identities=30% Similarity=0.385 Sum_probs=102.8
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|++++|++++..+ +.++++|+.|+|++|.+++ +| .+..+++|++|+|++|++++ + ..+..+++|+.|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 3478888888888887654 8888888888888888877 44 48888888888888888884 4 4678888888888
Q ss_pred ccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 153 LSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 153 l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
|++|++++. +.+..+++|+.|++++|+|++..| +..+++|+.|++++|+|+.++
T Consensus 141 l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~ 194 (291)
T 1h6t_A 141 LGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLR 194 (291)
T ss_dssp CCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCG
T ss_pred ccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCCh
Confidence 888888876 667788888888888888886544 788888888888888887653
No 331
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.63 E-value=1.8e-15 Score=164.33 Aligned_cols=136 Identities=24% Similarity=0.304 Sum_probs=105.9
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCC--CCchhccCCCCCcEEEccCccCCCCCccc-ccCCCCCC
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVD--LLPPQIVDCKKLEILNVQNNQFSGTIPSD-LSSLIRLR 149 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~ 149 (633)
..+++.|++++|.+++.+|..+.++++|+.|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 3467888888888888788888888888888888888876 45567888888888888888888656654 77788888
Q ss_pred EEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 150 VLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 150 ~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
.|+|++|++++.. ..+. ++|+.|+|++|+|+ .+|..+..+++|+.|++++|+|+.+|..
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~ 462 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDG 462 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTT
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHH
Confidence 8888888887654 2222 68888888888888 7777777888888888888888766643
No 332
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.63 E-value=2.4e-15 Score=157.03 Aligned_cols=108 Identities=18% Similarity=0.264 Sum_probs=60.7
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCccc-ccCCCCCCEEE
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSD-LSSLIRLRVLD 152 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ 152 (633)
.+++.|++++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|.. |..+++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 35566666666666555555666666666666666666555555556666666666666665 33332 45555666666
Q ss_pred ccCCcCCCCC-ccCCCCCCCCeEeCcCCcCC
Q 006739 153 LSGNSFSGNL-GFLKYFPNLEHLSLAKNLFT 182 (633)
Q Consensus 153 l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~ 182 (633)
|++|++++.+ ..+..+++|+.|++++|+++
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCS
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCC
Confidence 6666555544 23455555555555555544
No 333
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.63 E-value=6.6e-16 Score=171.19 Aligned_cols=141 Identities=18% Similarity=0.192 Sum_probs=128.8
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|+|++|+++++.|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..++++++|++|+
T Consensus 55 l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 55 FSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred CccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 45899999999999999999999999999999999999998899999999999999999999977778899999999999
Q ss_pred ccCCcCCC--CCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCC----eeccCCCCCCCCCcccc
Q 006739 153 LSGNSFSG--NLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQ----FFDFSGNSLLEGPIPVM 213 (633)
Q Consensus 153 l~~N~l~~--~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~----~l~l~~N~l~~~~~~~~ 213 (633)
|++|.+++ .+..+.++++|++|++++|++++..|..|+.+.+|+ .|++++|++..++...+
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~ 201 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAF 201 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTT
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccc
Confidence 99999986 467899999999999999999998888888777665 89999999987776543
No 334
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.63 E-value=1.4e-15 Score=168.63 Aligned_cols=141 Identities=16% Similarity=0.093 Sum_probs=129.9
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..++++++|++|+
T Consensus 56 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~ 135 (606)
T 3t6q_A 56 LINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLY 135 (606)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEE
T ss_pred CccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEE
Confidence 45899999999999999999999999999999999999998899999999999999999999976688899999999999
Q ss_pred ccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCC--eeccCCCCCCCCCcccc
Q 006739 153 LSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQ--FFDFSGNSLLEGPIPVM 213 (633)
Q Consensus 153 l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~--~l~l~~N~l~~~~~~~~ 213 (633)
|++|++++.. +.+..+++|+.|++++|++++..|..|+.+++|+ .|++++|++...++..+
T Consensus 136 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~ 199 (606)
T 3t6q_A 136 LGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAF 199 (606)
T ss_dssp CCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTT
T ss_pred CCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHh
Confidence 9999999864 5566699999999999999988899999999999 89999999988776543
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.63 E-value=7.4e-16 Score=155.56 Aligned_cols=139 Identities=17% Similarity=0.084 Sum_probs=115.2
Q ss_pred eeeeEEEEecCCCCcccCC----ccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCC--Cc--ccccC
Q 006739 73 VLKITKLVFVPRELTGVLS----PSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGT--IP--SDLSS 144 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~----~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p--~~~~~ 144 (633)
..+++.|+|++|.+++..+ ..+..+++|++|+|++|++++..|..|..+++|++|+|++|++.+. ++ ..+..
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 4478999999999998655 3456789999999999999998888999999999999999998753 22 23468
Q ss_pred CCCCCEEEccCCcCCCCCc----cCCCCCCCCeEeCcCCcCCccCCcccccC---CCCCeeccCCCCCCCCCcc
Q 006739 145 LIRLRVLDLSGNSFSGNLG----FLKYFPNLEHLSLAKNLFTGKVPTSIRTF---RNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 145 l~~L~~L~l~~N~l~~~~~----~~~~l~~L~~L~l~~N~l~~~~p~~~~~~---~~L~~l~l~~N~l~~~~~~ 211 (633)
+++|++|+|++|+++..+. .+..+++|++|+|++|+|++..|..+..+ ++|+.|+|++|+|+.+|..
T Consensus 196 l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~ 269 (310)
T 4glp_A 196 FPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKG 269 (310)
T ss_dssp SCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSC
T ss_pred CCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhh
Confidence 8999999999999986553 35678999999999999998878887777 6999999999999877643
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.62 E-value=5.1e-16 Score=150.43 Aligned_cols=158 Identities=18% Similarity=0.178 Sum_probs=125.5
Q ss_pred eeeeEEEEecCCC-CcccCCccccCCccccEEEccC-CCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCC-
Q 006739 73 VLKITKLVFVPRE-LTGVLSPSIGRLSELRELSLAN-NSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLR- 149 (633)
Q Consensus 73 ~~~~~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~- 149 (633)
..+++.|++++|+ ++++.+..|.++++|++|+|++ |+|++..+..|.++++|++|+|++|++++ +|. |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 4479999999997 8887777899999999999998 99998767789999999999999999994 776 88888888
Q ss_pred --EEEccCC-cCCCCC-ccCCCCCCCC-eEeCcCCcCCccCCcccccCCCCCeeccCCCC-CCCCCcccccccCCCCccc
Q 006739 150 --VLDLSGN-SFSGNL-GFLKYFPNLE-HLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNS-LLEGPIPVMRRVGPSGFQY 223 (633)
Q Consensus 150 --~L~l~~N-~l~~~~-~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~-l~~~~~~~~~~~~~~~~~~ 223 (633)
.|+|++| ++++.+ ..+..+++|+ .|++++|+++ .+|......++|+.|++++|+ +..+|... |..
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~--------~~~ 202 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDA--------FGG 202 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTT--------TTT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHH--------hhc
Confidence 9999999 998887 4588899999 9999999998 555443334889999999995 87665542 333
Q ss_pred c-ccccccccccCCCCCCC
Q 006739 224 P-KRYVLAETTTNGRSNGP 241 (633)
Q Consensus 224 ~-~~~~~~~~~~~~~~~~p 241 (633)
+ .++..+....+.....|
T Consensus 203 l~~~L~~L~l~~N~l~~l~ 221 (239)
T 2xwt_C 203 VYSGPSLLDVSQTSVTALP 221 (239)
T ss_dssp CSBCCSEEECTTCCCCCCC
T ss_pred cccCCcEEECCCCccccCC
Confidence 3 45555555555554433
No 337
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.62 E-value=1.8e-15 Score=138.13 Aligned_cols=105 Identities=21% Similarity=0.238 Sum_probs=65.7
Q ss_pred eEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccC
Q 006739 76 ITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSG 155 (633)
Q Consensus 76 ~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 155 (633)
.+.|++++|+++. +|..+ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4566777777666 33333 25666777777777666566666667777777777776654444556666666666666
Q ss_pred CcCCCCCc-cCCCCCCCCeEeCcCCcCCc
Q 006739 156 NSFSGNLG-FLKYFPNLEHLSLAKNLFTG 183 (633)
Q Consensus 156 N~l~~~~~-~~~~l~~L~~L~l~~N~l~~ 183 (633)
|+|++.++ .+..+++|+.|+|++|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 66666553 35566666666666666653
No 338
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.62 E-value=3.2e-16 Score=161.37 Aligned_cols=137 Identities=19% Similarity=0.252 Sum_probs=124.3
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcc--cccCCCCCCE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPS--DLSSLIRLRV 150 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~ 150 (633)
..+++.|++++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+++ .+|. .+..+++|+.
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 458999999999999998899999999999999999999866666999999999999999999 5665 7899999999
Q ss_pred EEccCC-cCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 151 LDLSGN-SFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 151 L~l~~N-~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
|++++| .+++.+ ..+..+++|+.|++++|++++..|..+..+++|+.|++++|++..+|.
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~ 215 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLE 215 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHH
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchh
Confidence 999999 477665 578899999999999999999999999999999999999999976654
No 339
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.62 E-value=2.5e-15 Score=153.12 Aligned_cols=132 Identities=17% Similarity=0.257 Sum_probs=80.4
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCC--CCcccccCCCCCCE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSG--TIPSDLSSLIRLRV 150 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~ 150 (633)
..+++.|++++|.++. +|..+. ++|+.|++++|++++..+..|.++++|+.|+|++|.++. ..+..+.++++|+.
T Consensus 99 l~~L~~L~Ls~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~ 175 (330)
T 1xku_A 99 LVKLERLYLSKNQLKE-LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSY 175 (330)
T ss_dssp CTTCCEEECCSSCCSB-CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCE
T ss_pred CCCCCEEECCCCcCCc-cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCE
Confidence 3467777777777764 333332 567777777777776656666677777777777777642 55566666666666
Q ss_pred EEccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 151 LDLSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 151 L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
|++++|.++..+..+. ++|+.|++++|++++..|..|..+++|+.|++++|++...+
T Consensus 176 L~l~~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 232 (330)
T 1xku_A 176 IRIADTNITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVD 232 (330)
T ss_dssp EECCSSCCCSCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEEC
T ss_pred EECCCCccccCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeC
Confidence 6666666665543322 45555555555555555555555555555555555554443
No 340
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.62 E-value=5.1e-16 Score=157.22 Aligned_cols=130 Identities=19% Similarity=0.185 Sum_probs=87.5
Q ss_pred eeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCccccc-CCCCCCEEEc
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLS-SLIRLRVLDL 153 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l 153 (633)
+++.|++++|++++..+. .+++|+.|+|++|++++..|..+..+++|++|+|++|.+++..|..+. .+++|+.|+|
T Consensus 100 ~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 176 (317)
T 3o53_A 100 SIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (317)
T ss_dssp TCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEEC
Confidence 455566666666554433 246677777777777776566777777777777777777766566553 5777777777
Q ss_pred cCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 154 SGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 154 ~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
++|.+++.+. ...+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+|..+|
T Consensus 177 ~~N~l~~~~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l~ 230 (317)
T 3o53_A 177 QYNFIYDVKG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIE 230 (317)
T ss_dssp TTSCCCEEEC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEEC
T ss_pred CCCcCccccc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccchh
Confidence 7777776643 2347777777777777774 4445777777777777777776554
No 341
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.61 E-value=5.6e-16 Score=166.29 Aligned_cols=126 Identities=21% Similarity=0.151 Sum_probs=74.0
Q ss_pred eeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEcc
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLS 154 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (633)
+++.|+|++|.|++..+ .++|+.|+|++|.|++..+ ..+++|+.|+|++|.|++..|..++.+++|+.|+|+
T Consensus 81 ~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~~N~l~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 152 (487)
T 3oja_A 81 TLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK 152 (487)
T ss_dssp TCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCCCEEE---CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECT
T ss_pred CCCEEEecCCcCCCCCC-----CCCcCEEECcCCcCCCCCc---cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECC
Confidence 56666666666665432 2566666666666666433 234566666666666666556666666666666666
Q ss_pred CCcCCCCC-ccCC-CCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 155 GNSFSGNL-GFLK-YFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 155 ~N~l~~~~-~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
+|.|++.+ ..+. .+++|+.|+|++|.|++..+ +..+++|+.|+|++|+|+.+|+
T Consensus 153 ~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~ 208 (487)
T 3oja_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP 208 (487)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG
T ss_pred CCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH
Confidence 66666543 3332 56666666666666664422 2236666666666666655443
No 342
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.61 E-value=2.7e-15 Score=147.35 Aligned_cols=124 Identities=25% Similarity=0.335 Sum_probs=94.7
Q ss_pred eeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEcc
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLS 154 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (633)
+++.|++++|+++.. + .+..+++|+.|+|++|+|++. |. +..+++|++|+|++|++++ +|... . ++|+.|+|+
T Consensus 42 ~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~ 114 (263)
T 1xeu_A 42 GVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFLD 114 (263)
T ss_dssp TCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEECC
T ss_pred cCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEcc
Confidence 678888888888764 3 677888888888888888874 44 8888888888888888884 55432 2 788888888
Q ss_pred CCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCC
Q 006739 155 GNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 155 ~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
+|++++.+ .+..+++|+.|+|++|+|++. + .+..+++|+.|++++|++...
T Consensus 115 ~N~l~~~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 115 NNELRDTD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp SSCCSBSG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCccCCCh-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 88888753 577788888888888888853 3 577788888888888888655
No 343
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.61 E-value=2.6e-15 Score=137.49 Aligned_cols=103 Identities=21% Similarity=0.265 Sum_probs=66.9
Q ss_pred EEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCC
Q 006739 77 TKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGN 156 (633)
Q Consensus 77 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 156 (633)
+.+++++|+++. +|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 457777777754 344442 66777777777777766667777777777777777777444444566666777777766
Q ss_pred cCCCCCc-cCCCCCCCCeEeCcCCcCC
Q 006739 157 SFSGNLG-FLKYFPNLEHLSLAKNLFT 182 (633)
Q Consensus 157 ~l~~~~~-~~~~l~~L~~L~l~~N~l~ 182 (633)
+|++.++ .+..+++|+.|+|++|.|.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 6666653 3666666666666666666
No 344
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.61 E-value=4.2e-15 Score=148.35 Aligned_cols=128 Identities=25% Similarity=0.354 Sum_probs=114.6
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.+++.|++++|++... +.+..+++|+.|+|++|++++. +. +..+++|++|+|++|++++ +| .+..+++|+.|+|
T Consensus 46 ~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 4789999999999886 4589999999999999999984 44 9999999999999999994 44 4999999999999
Q ss_pred cCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 154 SGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 154 ~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
++|++++. +.+..+++|+.|++++|++++. ..+..+++|+.|++++|++...++
T Consensus 120 ~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 120 EHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp TTSCCCCC-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CCCcCCCC-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 99999986 5688899999999999999965 678999999999999999987654
No 345
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.61 E-value=4e-15 Score=163.22 Aligned_cols=135 Identities=24% Similarity=0.312 Sum_probs=110.8
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCC--CchhccCCCCCcEEEccCccCCCCCccc-ccCCCCCCE
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDL--LPPQIVDCKKLEILNVQNNQFSGTIPSD-LSSLIRLRV 150 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~ 150 (633)
.+++.|++++|.+++.+|..+.++++|+.|+|++|++++. +|..+.++++|++|+|++|++++.+|.. +..+++|+.
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~ 432 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILV 432 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCE
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCE
Confidence 4788999999999988888899999999999999999873 3467888999999999999998756654 778889999
Q ss_pred EEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 151 LDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 151 L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
|+|++|++++.. ..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++.+|..
T Consensus 433 L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~ 491 (562)
T 3a79_B 433 LNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDG 491 (562)
T ss_dssp EECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTT
T ss_pred EECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHH
Confidence 999999987654 2222 68999999999998 6777777889999999999998877654
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.60 E-value=1.7e-15 Score=163.97 Aligned_cols=133 Identities=23% Similarity=0.301 Sum_probs=88.9
Q ss_pred CCCCC-----CCCce-eeCCCCCCCCcceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCC
Q 006739 51 PSDPC-----STPGV-FCERRLSDNNTYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKL 124 (633)
Q Consensus 51 ~~~~C-----~~~gv-~c~~~~~~~~~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 124 (633)
..++| .|.|+ .|... +++.|+|++|+|++ +|..+ +++|+.|+|++|+|+. +| ..+++|
T Consensus 39 ~~~~~~~~~~~~~~l~~C~~~---------~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~~-ip---~~l~~L 102 (571)
T 3cvr_A 39 QALPGENRNEAVSLLKECLIN---------QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALIS-LP---ELPASL 102 (571)
T ss_dssp TCCTTCCHHHHHHHHHHHHHT---------TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCSC-CC---CCCTTC
T ss_pred cCCccccccchhhhccccccC---------CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCcc-cc---cccCCC
Confidence 34677 67888 67643 57777777777776 45444 2667777777777774 56 446777
Q ss_pred cEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCC
Q 006739 125 EILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNS 204 (633)
Q Consensus 125 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~ 204 (633)
++|+|++|+|++ +|. +.+ +|+.|+|++|+|++.+. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTMLPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQ 171 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCCCCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCC
Confidence 777777777774 666 554 77777777777776555 46677777777777774 554 35667777777777
Q ss_pred CCCCCc
Q 006739 205 LLEGPI 210 (633)
Q Consensus 205 l~~~~~ 210 (633)
|+.+|.
T Consensus 172 L~~lp~ 177 (571)
T 3cvr_A 172 LTFLPE 177 (571)
T ss_dssp CSCCCC
T ss_pred CCCcch
Confidence 766543
No 347
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.60 E-value=1.4e-15 Score=149.35 Aligned_cols=129 Identities=22% Similarity=0.405 Sum_probs=114.4
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|+|++|++++..+ +.++++|+.|+|++|++++ +|. +.. ++|+.|+|++|++++ ++ .+..+++|+.|+
T Consensus 62 l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 4589999999999998755 9999999999999999998 554 333 999999999999995 44 699999999999
Q ss_pred ccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcc
Q 006739 153 LSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIP 211 (633)
Q Consensus 153 l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~ 211 (633)
|++|++++.+ .+..+++|+.|+|++|+|++. ..+..+++|+.|++++|++.+.|..
T Consensus 135 Ls~N~i~~~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~~~ 190 (263)
T 1xeu_A 135 IRNNKLKSIV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEPVK 190 (263)
T ss_dssp CTTSCCCBCG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCCEE
T ss_pred CCCCcCCCCh-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCccc
Confidence 9999999875 688899999999999999976 6789999999999999999777643
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.60 E-value=3.9e-15 Score=149.91 Aligned_cols=128 Identities=23% Similarity=0.377 Sum_probs=114.4
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|++++|.+++. +.+.++++|+.|+|++|++++ ++. +..+++|+.|+|++|++++ ++. +..+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 157 (308)
T 1h6u_A 84 LTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLS 157 (308)
T ss_dssp CCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEE
T ss_pred CCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEE
Confidence 45899999999999885 469999999999999999998 553 9999999999999999995 444 88999999999
Q ss_pred ccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 153 LSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 153 l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
|++|++++.+. +..+++|+.|++++|++++..+ +..+++|+.|++++|++...+
T Consensus 158 l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 158 IGNAQVSDLTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp CCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG
T ss_pred ccCCcCCCChh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc
Confidence 99999998776 8899999999999999996543 889999999999999998776
No 349
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.60 E-value=3.3e-15 Score=163.57 Aligned_cols=128 Identities=30% Similarity=0.383 Sum_probs=112.7
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|+|++|.|++..+ +.++++|+.|+|++|.|++ +| .+..+++|+.|+|++|+|++ + ..+..|++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 4589999999999998755 8999999999999999987 44 78999999999999999994 4 4588999999999
Q ss_pred ccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 153 LSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 153 l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
|++|+|++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|..++
T Consensus 138 Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l~ 191 (605)
T 1m9s_A 138 LGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLR 191 (605)
T ss_dssp CCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCG
T ss_pred CCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCCh
Confidence 999999987 678899999999999999997666 889999999999999997753
No 350
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.60 E-value=2.1e-15 Score=163.82 Aligned_cols=125 Identities=22% Similarity=0.237 Sum_probs=77.3
Q ss_pred EEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCc
Q 006739 78 KLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNS 157 (633)
Q Consensus 78 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 157 (633)
.|++++|+++. +|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 4 ~l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 46666666664 444443 566666666666666555666666666666666666665556666666666666666666
Q ss_pred CCCCCccCCCCCCCCeEeCcCCcCCc-cCCcccccCCCCCeeccCCCCCCC
Q 006739 158 FSGNLGFLKYFPNLEHLSLAKNLFTG-KVPTSIRTFRNLQFFDFSGNSLLE 207 (633)
Q Consensus 158 l~~~~~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~~~~L~~l~l~~N~l~~ 207 (633)
|++.+.. .+++|++|+|++|+|++ .+|..|+.+++|++|++++|++..
T Consensus 81 l~~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 81 LVKISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129 (520)
T ss_dssp CCEEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG
T ss_pred eeecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch
Confidence 6654433 56666666666666665 355666666666666666666643
No 351
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.59 E-value=4.5e-15 Score=151.38 Aligned_cols=132 Identities=21% Similarity=0.306 Sum_probs=79.0
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCC--CCCcccccCCCCCCEE
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFS--GTIPSDLSSLIRLRVL 151 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L 151 (633)
.+++.|++++|.++. +|..+. ++|++|+|++|++++..+..|.++++|+.|+|++|.++ +..|..+..+ +|+.|
T Consensus 102 ~~L~~L~L~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L 177 (332)
T 2ft3_A 102 RKLQKLYISKNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYL 177 (332)
T ss_dssp TTCCEEECCSSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCC
T ss_pred CCCCEEECCCCcCCc-cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEE
Confidence 467778888887774 343333 67777777777777755556777777777777777775 3555556555 55555
Q ss_pred EccCCcCCCCC----------------------ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 152 DLSGNSFSGNL----------------------GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 152 ~l~~N~l~~~~----------------------~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
++++|++++.+ ..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++..+|
T Consensus 178 ~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp 257 (332)
T 2ft3_A 178 RISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVP 257 (332)
T ss_dssp BCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCC
T ss_pred ECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecC
Confidence 55555544433 33445555555555555555444445555555555555555554433
No 352
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.59 E-value=3.3e-15 Score=153.43 Aligned_cols=187 Identities=13% Similarity=0.119 Sum_probs=133.9
Q ss_pred CCCCceeeCCCC-CCCC-cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCc-hhccCCCCCcE-EEcc
Q 006739 55 CSTPGVFCERRL-SDNN-TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLP-PQIVDCKKLEI-LNVQ 130 (633)
Q Consensus 55 C~~~gv~c~~~~-~~~~-~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~-L~Ls 130 (633)
|++..|.|.... ...+ ..+.+++.|+|++|+|+.+.+..|.++++|++|+|++|++.+.+| ..|.++++|+. ++++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 788899998732 2211 224579999999999998877889999999999999999977555 57889988775 6778
Q ss_pred CccCCCCCcccccCCCCCCEEEccCCcCCCCCc-cCCCCCCCCeEeCcC-CcCCccCCcccccCC-CCCeeccCCCCCCC
Q 006739 131 NNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLG-FLKYFPNLEHLSLAK-NLFTGKVPTSIRTFR-NLQFFDFSGNSLLE 207 (633)
Q Consensus 131 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~-N~l~~~~p~~~~~~~-~L~~l~l~~N~l~~ 207 (633)
+|+|+...|..|..+++|++|++++|++++.++ .+....++..|++++ |++....+..|..+. .++.|+|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 899997778889999999999999999998763 344555666777654 456544444555543 46677777777776
Q ss_pred CCcccccc----------------cCCCCccccccccccccccCCCCCCC
Q 006739 208 GPIPVMRR----------------VGPSGFQYPKRYVLAETTTNGRSNGP 241 (633)
Q Consensus 208 ~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~p 241 (633)
++...+.. .....|..+.++..++.+.|.....|
T Consensus 169 i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp 218 (350)
T 4ay9_X 169 IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLP 218 (350)
T ss_dssp ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCC
T ss_pred CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccC
Confidence 66543221 11234555566666666666555444
No 353
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.58 E-value=6.6e-15 Score=161.45 Aligned_cols=133 Identities=20% Similarity=0.226 Sum_probs=105.2
Q ss_pred cCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCC--CcccccCCCCCCEEEccCCcCCC-CC-ccCCCCCC
Q 006739 95 GRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGT--IPSDLSSLIRLRVLDLSGNSFSG-NL-GFLKYFPN 170 (633)
Q Consensus 95 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~l~~N~l~~-~~-~~~~~l~~ 170 (633)
..+++|++|+|++|++++.+|..+.++++|++|+|++|++++. +|..+..+++|+.|+|++|++++ .+ ..+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 6788899999999999988888999999999999999999852 34668889999999999999988 55 45778899
Q ss_pred CCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcccccccCCCCccccccccccccccCCCC
Q 006739 171 LEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIPVMRRVGPSGFQYPKRYVLAETTTNGRS 238 (633)
Q Consensus 171 L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (633)
|+.|++++|+|++.+|..+. ++|+.|+|++|+|+.+|...+ .+.++..+....|...
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~---------~l~~L~~L~L~~N~l~ 486 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVT---------HLQALQELNVASNQLK 486 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTT---------SSCCCSEEECCSSCCC
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhc---------CCCCCCEEECCCCCCC
Confidence 99999999999887776653 689999999999987765432 2344555555555544
No 354
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=1.9e-15 Score=134.73 Aligned_cols=113 Identities=26% Similarity=0.309 Sum_probs=101.0
Q ss_pred CCccccEEEccCCCCC-CCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCC-CCccCCCCCCCCe
Q 006739 96 RLSELRELSLANNSLV-DLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSG-NLGFLKYFPNLEH 173 (633)
Q Consensus 96 ~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~~l~~L~~ 173 (633)
..++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|+.|+|++|.+++ .+..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3578999999999998 67899999999999999999999965 789999999999999999999 4456667999999
Q ss_pred EeCcCCcCCcc-CCcccccCCCCCeeccCCCCCCCCCc
Q 006739 174 LSLAKNLFTGK-VPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 174 L~l~~N~l~~~-~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
|++++|++++. .+..+..+++|+.|++++|+++..+.
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 99999999963 34789999999999999999987764
No 355
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.58 E-value=2.3e-15 Score=152.35 Aligned_cols=126 Identities=21% Similarity=0.157 Sum_probs=81.1
Q ss_pred eeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEcc
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLS 154 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (633)
+++.|++++|.+++.. ..++|+.|++++|++++..+ ..+++|+.|+|++|++++..|..+..+++|+.|+|+
T Consensus 81 ~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~---~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 152 (317)
T 3o53_A 81 TLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK 152 (317)
T ss_dssp TCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEE---CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECT
T ss_pred CCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCc---cccCCCCEEECCCCCCCCccchhhhccCCCCEEECC
Confidence 5677777777776542 23667777777777766433 235667777777777776556667777777777777
Q ss_pred CCcCCCCC-ccC-CCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 155 GNSFSGNL-GFL-KYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 155 ~N~l~~~~-~~~-~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
+|.+++.+ ..+ ..+++|++|+|++|+|++. | ....+++|+.|+|++|++..+|+
T Consensus 153 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~ 208 (317)
T 3o53_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGP 208 (317)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECG
T ss_pred CCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcchh
Confidence 77777654 333 3567777777777777644 2 22346777777777777765543
No 356
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.58 E-value=3.7e-15 Score=163.81 Aligned_cols=140 Identities=19% Similarity=0.195 Sum_probs=127.9
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..++++++|++|+
T Consensus 51 l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 130 (570)
T 2z63_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (570)
T ss_dssp CSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEE
T ss_pred CCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEe
Confidence 45899999999999998888999999999999999999998888999999999999999999965555799999999999
Q ss_pred ccCCcCCC--CCccCCCCCCCCeEeCcCCcCCccCCcccccCCCC----CeeccCCCCCCCCCccc
Q 006739 153 LSGNSFSG--NLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNL----QFFDFSGNSLLEGPIPV 212 (633)
Q Consensus 153 l~~N~l~~--~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L----~~l~l~~N~l~~~~~~~ 212 (633)
|++|.+++ .+..+.++++|+.|++++|++++..|..++.+++| ..|++++|.+..+++..
T Consensus 131 L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~ 196 (570)
T 2z63_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA 196 (570)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTT
T ss_pred cCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHH
Confidence 99999997 46789999999999999999998888889988888 89999999998776653
No 357
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.58 E-value=4.5e-15 Score=161.54 Aligned_cols=108 Identities=24% Similarity=0.329 Sum_probs=82.9
Q ss_pred cccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCCccCCCCCCCCeEeCcC
Q 006739 99 ELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLGFLKYFPNLEHLSLAK 178 (633)
Q Consensus 99 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~ 178 (633)
.|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++++ .+..+++|+.|+|++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCC
Confidence 47778888888877 565 777788888888888887 77777778888888888888887765 677778888888888
Q ss_pred CcCCccC-CcccccCCCCCeeccCCCCCCCCCc
Q 006739 179 NLFTGKV-PTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 179 N~l~~~~-p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
|+|++.. |..|+.+++|+.|+|++|+++..|+
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 8887665 7777778888888888887766654
No 358
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.58 E-value=6.1e-16 Score=168.38 Aligned_cols=121 Identities=23% Similarity=0.318 Sum_probs=109.0
Q ss_pred eeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEcc
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLS 154 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (633)
.++.|+|++|+|++ +|. |+++++|+.|+|++|+|+. +|..|+++++|+.|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~-lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCC-CCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCcccccc-cchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47889999999998 455 9999999999999999995 89999999999999999999995 78 89999999999999
Q ss_pred CCcCCCC--CccCCCCCCCCeEeCcCCcCCccCCcc---cccCCCCCeecc
Q 006739 155 GNSFSGN--LGFLKYFPNLEHLSLAKNLFTGKVPTS---IRTFRNLQFFDF 200 (633)
Q Consensus 155 ~N~l~~~--~~~~~~l~~L~~L~l~~N~l~~~~p~~---~~~~~~L~~l~l 200 (633)
+|+|++. +..+..+++|+.|+|++|+|++.+|.. +..+++|+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999999 688999999999999999999766532 345899999875
No 359
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.57 E-value=1.1e-14 Score=163.63 Aligned_cols=164 Identities=14% Similarity=0.108 Sum_probs=118.0
Q ss_pred eeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCc-hhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLP-PQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.++.|++++|++++..|..|.++++|+.|+|++|.+++.+| ..|.++++|++|+|++|++++..+..|..+++|+.|++
T Consensus 382 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l 461 (680)
T 1ziw_A 382 PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLML 461 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEEC
T ss_pred cCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchh
Confidence 57777888888888878888888888888888888876555 67888888888888888888777777888888888888
Q ss_pred cCCcCCC---CCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcccccccCCCCcccccccccc
Q 006739 154 SGNSFSG---NLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIPVMRRVGPSGFQYPKRYVLA 230 (633)
Q Consensus 154 ~~N~l~~---~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (633)
++|.+++ .+..+..+++|+.|+|++|+|++..|..|..+++|+.|++++|++..++...........|..+.++..+
T Consensus 462 ~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L 541 (680)
T 1ziw_A 462 RRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHIL 541 (680)
T ss_dssp TTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEE
T ss_pred ccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEE
Confidence 8887753 2356778888888888888888766777888888888888888886654322111111224444555555
Q ss_pred ccccCCCC
Q 006739 231 ETTTNGRS 238 (633)
Q Consensus 231 ~~~~~~~~ 238 (633)
....|...
T Consensus 542 ~L~~N~l~ 549 (680)
T 1ziw_A 542 NLESNGFD 549 (680)
T ss_dssp ECCSSCCC
T ss_pred ECCCCCCC
Confidence 55555443
No 360
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.57 E-value=1.8e-15 Score=165.53 Aligned_cols=137 Identities=16% Similarity=0.197 Sum_probs=123.7
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCC-CCcccccCCCCCCEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSG-TIPSDLSSLIRLRVL 151 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L 151 (633)
..++++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|..++++++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 4589999999999999999999999999999999999999888889999999999999999996 367889999999999
Q ss_pred EccCCc-CCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 152 DLSGNS-FSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 152 ~l~~N~-l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
+|++|. ++..+ ..+..+++|++|++++|++++.+|..+..+++|+.|++++|.+...|
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~ 188 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLL 188 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHH
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccc
Confidence 999998 45454 57899999999999999999999999999988999998888875544
No 361
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.57 E-value=6.5e-16 Score=173.49 Aligned_cols=135 Identities=19% Similarity=0.180 Sum_probs=119.7
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
...++.|+|++|.+. .+|..+.++++|+.|+|++|.|+ .+|..|.+|++|++|+|++|+|+ .+|..|++|++|++|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 347999999999998 56777779999999999999999 58999999999999999999999 8899999999999999
Q ss_pred ccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCC-CCeeccCCCCCCCCCc
Q 006739 153 LSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRN-LQFFDFSGNSLLEGPI 210 (633)
Q Consensus 153 l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~-L~~l~l~~N~l~~~~~ 210 (633)
|++|.|+.++..|..+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.++...+
T Consensus 300 L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 300 FFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp CCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred CCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 999999988888999999999999999999999988765432 2357899999854333
No 362
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=1.7e-14 Score=131.63 Aligned_cols=109 Identities=19% Similarity=0.226 Sum_probs=98.1
Q ss_pred cccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCCc-cCCCCCCCCeEeCc
Q 006739 99 ELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLG-FLKYFPNLEHLSLA 177 (633)
Q Consensus 99 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~ 177 (633)
..+.|++++|+|+. +|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++.++ .+..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 35789999999988 787663 899999999999998889999999999999999999999884 57899999999999
Q ss_pred CCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 178 KNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 178 ~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
+|+|++..+..|..+++|+.|+|++|++.+.+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999997777779999999999999999987754
No 363
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.55 E-value=8.2e-15 Score=168.34 Aligned_cols=136 Identities=20% Similarity=0.231 Sum_probs=122.2
Q ss_pred eeeeEEEEecCCCCcccC-CccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCccc--ccCCCCCC
Q 006739 73 VLKITKLVFVPRELTGVL-SPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSD--LSSLIRLR 149 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~ 149 (633)
..+++.|+|++|.+.+.+ |..|.++++|++|+|++|.|++..|..|.++++|++|+|++|.+++.+|.. |.++++|+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 457999999999777666 678999999999999999999988999999999999999999999877766 99999999
Q ss_pred EEEccCCcCCCCC--ccCCCCCCCCeEeCcCCcCCccCCcccccC--CCCCeeccCCCCCCCC
Q 006739 150 VLDLSGNSFSGNL--GFLKYFPNLEHLSLAKNLFTGKVPTSIRTF--RNLQFFDFSGNSLLEG 208 (633)
Q Consensus 150 ~L~l~~N~l~~~~--~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~--~~L~~l~l~~N~l~~~ 208 (633)
+|+|++|.+++.. ..+.++++|++|+|++|.+++..|..+..+ ++|+.|++++|.+...
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~ 189 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSR 189 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCC
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccc
Confidence 9999999999875 468999999999999999999899888877 8899999999988653
No 364
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=2.2e-14 Score=131.21 Aligned_cols=108 Identities=18% Similarity=0.194 Sum_probs=97.6
Q ss_pred ccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCCc-cCCCCCCCCeEeCcC
Q 006739 100 LRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLG-FLKYFPNLEHLSLAK 178 (633)
Q Consensus 100 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~ 178 (633)
-+.+++++|+++. +|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++.+. .+..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 3789999999976 787664 899999999999998889999999999999999999999885 468999999999999
Q ss_pred CcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 179 NLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 179 N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
|+|++..+..|..+++|+.|+|++|++.+.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99997666669999999999999999988764
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.54 E-value=2.2e-14 Score=157.05 Aligned_cols=128 Identities=25% Similarity=0.352 Sum_probs=114.6
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.+++.|++++|.+... +.+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++ +| .+..+++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCCC--TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCCC--hHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 3789999999999875 369999999999999999999544 9999999999999999994 55 7999999999999
Q ss_pred cCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 154 SGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 154 ~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
++|+|++. +.+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|+|..+++
T Consensus 117 s~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 117 EHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp TTSCCCCC-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred cCCCCCCC-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 99999986 5688999999999999999965 678999999999999999987654
No 366
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.53 E-value=1.8e-14 Score=131.24 Aligned_cols=114 Identities=23% Similarity=0.281 Sum_probs=103.0
Q ss_pred cceeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCc--ccccCCCCC
Q 006739 71 TYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIP--SDLSSLIRL 148 (633)
Q Consensus 71 ~~~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L 148 (633)
....+++.|++++|.+++. ..+..+++|+.|+|++|++++.+|..+.++++|++|+|++|+|++ +| ..+..+++|
T Consensus 46 ~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L 122 (168)
T 2ell_A 46 AEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECL 122 (168)
T ss_dssp GGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCC
T ss_pred HhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCC
Confidence 3355899999999999987 789999999999999999999888888889999999999999995 44 789999999
Q ss_pred CEEEccCCcCCCCCc----cCCCCCCCCeEeCcCCcCCccCCcc
Q 006739 149 RVLDLSGNSFSGNLG----FLKYFPNLEHLSLAKNLFTGKVPTS 188 (633)
Q Consensus 149 ~~L~l~~N~l~~~~~----~~~~l~~L~~L~l~~N~l~~~~p~~ 188 (633)
+.|+|++|.+++.+. .+..+++|++|++++|.+. .+|+.
T Consensus 123 ~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 123 KSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp CEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred CEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 999999999999886 7899999999999999998 56654
No 367
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.53 E-value=2.9e-14 Score=146.29 Aligned_cols=110 Identities=25% Similarity=0.413 Sum_probs=56.5
Q ss_pred ccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCCccCCCCCCCCe
Q 006739 94 IGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLGFLKYFPNLEH 173 (633)
Q Consensus 94 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~ 173 (633)
+..+++|+.|+|++|.+++ ++. +..+++|++|+|++|.+++ + ..+..+++|+.|++++|++++. +.+..+++|+.
T Consensus 217 ~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~ 291 (347)
T 4fmz_A 217 VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNS 291 (347)
T ss_dssp GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSE
T ss_pred hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCE
Confidence 4444455555555555544 222 4455555555555555552 2 2345555555555555555544 33445555555
Q ss_pred EeCcCCcCCccCCcccccCCCCCeeccCCCCCCCC
Q 006739 174 LSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 174 L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
|++++|.+++..|..+..+++|+.|++++|+++..
T Consensus 292 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 292 LFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp EECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred EECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 55555555555555555555555555555555444
No 368
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=1.4e-14 Score=132.97 Aligned_cols=114 Identities=15% Similarity=0.215 Sum_probs=99.5
Q ss_pred ccccCCccccEEEccCCCCCCCCchhccCC-CCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCCcc-CCCCC
Q 006739 92 PSIGRLSELRELSLANNSLVDLLPPQIVDC-KKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLGF-LKYFP 169 (633)
Q Consensus 92 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~ 169 (633)
+.+.++++|+.|+|++|+++. +|. +..+ ++|++|+|++|.|++. ..+..+++|+.|+|++|+|++.++. +..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 457788999999999999997 565 5554 5999999999999964 6899999999999999999988754 48999
Q ss_pred CCCeEeCcCCcCCccCCc--ccccCCCCCeeccCCCCCCCCCc
Q 006739 170 NLEHLSLAKNLFTGKVPT--SIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 170 ~L~~L~l~~N~l~~~~p~--~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
+|++|+|++|+|+ .+|. .+..+++|+.|++++|++...|.
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~ 130 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKH 130 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTT
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHh
Confidence 9999999999997 5676 78999999999999999987654
No 369
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.52 E-value=2.7e-14 Score=146.58 Aligned_cols=126 Identities=27% Similarity=0.389 Sum_probs=111.1
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|++++|++++..+ +..+++|+.|+|++|.+++ + ..+..+++|++|+|++|++++ + ..+..+++|+.|+
T Consensus 220 ~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~ 293 (347)
T 4fmz_A 220 MTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLF 293 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEE
Confidence 4579999999999998654 9999999999999999998 4 479999999999999999995 4 4688999999999
Q ss_pred ccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCC
Q 006739 153 LSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLL 206 (633)
Q Consensus 153 l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~ 206 (633)
|++|.+++.. ..+..+++|+.|++++|++++..| +..+++|+.|++++|+|+
T Consensus 294 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 294 LNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 9999999877 668899999999999999997666 889999999999999985
No 370
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.51 E-value=2.8e-14 Score=152.66 Aligned_cols=129 Identities=21% Similarity=0.337 Sum_probs=109.6
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|++++|.+++..+ +..+++|+.|+|++|.+++. +. +..+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 242 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 4478999999999988755 88899999999999999884 43 8889999999999999995443 78899999999
Q ss_pred ccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 153 LSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 153 l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
|++|++++.++ +..+++|+.|++++|++++. ..+..+++|+.|++++|++...++
T Consensus 316 L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 316 LYFNNISDISP-VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp CCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred CcCCcCCCchh-hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch
Confidence 99999998776 67889999999999999864 468889999999999999876654
No 371
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=7e-17 Score=151.63 Aligned_cols=130 Identities=20% Similarity=0.250 Sum_probs=97.5
Q ss_pred eeEEEEecCCCCcccCCc------cccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCC
Q 006739 75 KITKLVFVPRELTGVLSP------SIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRL 148 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 148 (633)
+++.++++.+.+.|.+|. .+.++++|+.|+|++|.|++ +| .+..+++|++|+|++|.|+ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455566666666666665 77788888888888888877 66 7778888888888888888 677777777888
Q ss_pred CEEEccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCC-cccccCCCCCeeccCCCCCCCC
Q 006739 149 RVLDLSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVP-TSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 149 ~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
+.|+|++|++++.+ .+..+++|+.|++++|+|++..+ ..+..+++|+.|++++|++.+.
T Consensus 96 ~~L~L~~N~l~~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 96 EELWISYNQIASLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp SEEEEEEEECCCHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred CEEECcCCcCCcCC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 88888888888754 56677888888888888874322 4677788888888888887544
No 372
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.50 E-value=5.7e-14 Score=152.14 Aligned_cols=121 Identities=26% Similarity=0.346 Sum_probs=93.4
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|+|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+
T Consensus 99 l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 166 (571)
T 3cvr_A 99 PASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLS 166 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred cCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEE
Confidence 4578889999998888 555 655 88999999999988 665 67888899999998884 666 567888888
Q ss_pred ccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCC-------CeeccCCCCCCCCCccc
Q 006739 153 LSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNL-------QFFDFSGNSLLEGPIPV 212 (633)
Q Consensus 153 l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L-------~~l~l~~N~l~~~~~~~ 212 (633)
|++|+|++.+. +. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+.+|...
T Consensus 167 Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~~l 226 (571)
T 3cvr_A 167 VRNNQLTFLPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITHIPENI 226 (571)
T ss_dssp CCSSCCSCCCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCCCCGGG
T ss_pred CCCCCCCCcch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcceecCHHH
Confidence 88888888666 54 78888888888888 6666 543 66 88888888888776543
No 373
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.48 E-value=1.1e-13 Score=148.04 Aligned_cols=127 Identities=26% Similarity=0.375 Sum_probs=113.8
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|++++|.+++. +.+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.+++. |. +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEE
Confidence 45799999999999885 568899999999999999998544 89999999999999999954 44 88999999999
Q ss_pred ccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCC
Q 006739 153 LSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 153 l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
|++|++++.++ +..+++|+.|++++|++++..| +..+++|+.|++++|++...
T Consensus 294 L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 294 LNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCCCcccCchh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 99999998766 7889999999999999998766 78999999999999999765
No 374
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.47 E-value=1.1e-13 Score=142.08 Aligned_cols=101 Identities=21% Similarity=0.177 Sum_probs=86.5
Q ss_pred EecCC-CCcccCCccccCCccccEEEccC-CCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCc
Q 006739 80 VFVPR-ELTGVLSPSIGRLSELRELSLAN-NSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNS 157 (633)
Q Consensus 80 ~l~~n-~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 157 (633)
+++++ +|++ +|. |..+++|+.|+|++ |+|+++.|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++|+
T Consensus 14 ~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 33344 6766 566 99999999999996 99999777899999999999999999999888899999999999999999
Q ss_pred CCCCCcc-CCCCCCCCeEeCcCCcCCc
Q 006739 158 FSGNLGF-LKYFPNLEHLSLAKNLFTG 183 (633)
Q Consensus 158 l~~~~~~-~~~l~~L~~L~l~~N~l~~ 183 (633)
|++.++. +..++ |+.|+|++|.|..
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred cceeCHHHcccCC-ceEEEeeCCCccC
Confidence 9998854 44444 9999999999984
No 375
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.46 E-value=2.9e-13 Score=143.82 Aligned_cols=123 Identities=22% Similarity=0.241 Sum_probs=77.5
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.+++.|++++|++++. + ++.+++|++|+|++|+|++ +| ++++++|++|+|++|++++ +| ++.+++|+.|++
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 3566677777776664 2 6666677777777777666 33 6666777777777777764 33 666667777777
Q ss_pred cCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 154 SGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 154 ~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
++|++++.+ +..+++|+.|++++|+..+.+ .+..+++|+.|++++|+++.+|
T Consensus 135 ~~N~l~~l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~ 186 (457)
T 3bz5_A 135 ARNTLTEID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD 186 (457)
T ss_dssp TTSCCSCCC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC
T ss_pred CCCccceec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec
Confidence 777766642 555666666666666444444 2555666666666666665554
No 376
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.45 E-value=4.4e-13 Score=142.29 Aligned_cols=98 Identities=23% Similarity=0.292 Sum_probs=47.5
Q ss_pred ccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCCccCCCCCCCCeEeCc
Q 006739 98 SELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLGFLKYFPNLEHLSLA 177 (633)
Q Consensus 98 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~ 177 (633)
++|++|+|++|++++ +| .|+++++|++|++++|++++ +|..+ .+|++|+|++|++++.+ .+..+++|+.|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEELP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcCc-cccCCCCCCEEECC
Confidence 345555555555554 44 35555555555555555552 44322 34555555555555433 34455555555555
Q ss_pred CCcCCccCCcccccCCCCCeeccCCCCCC
Q 006739 178 KNLFTGKVPTSIRTFRNLQFFDFSGNSLL 206 (633)
Q Consensus 178 ~N~l~~~~p~~~~~~~~L~~l~l~~N~l~ 206 (633)
+|++++ +|... ++|+.|++++|++.
T Consensus 204 ~N~l~~-l~~~~---~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 204 NNSLKK-LPDLP---LSLESIVAGNNILE 228 (454)
T ss_dssp SSCCSS-CCCCC---TTCCEEECCSSCCS
T ss_pred CCcCCc-CCCCc---CcccEEECcCCcCC
Confidence 555543 33221 24444444444444
No 377
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.45 E-value=6.2e-16 Score=145.14 Aligned_cols=128 Identities=25% Similarity=0.313 Sum_probs=113.3
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|++++|++++ +| .+.++++|+.|+|++|.|+. +|..+..+++|++|+|++|++++ +| .+..+++|+.|+
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~-l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS-CSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc-ccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 3479999999999998 55 89999999999999999986 78888889999999999999995 66 688999999999
Q ss_pred ccCCcCCCCC--ccCCCCCCCCeEeCcCCcCCccCCcc----------cccCCCCCeeccCCCCCCC
Q 006739 153 LSGNSFSGNL--GFLKYFPNLEHLSLAKNLFTGKVPTS----------IRTFRNLQFFDFSGNSLLE 207 (633)
Q Consensus 153 l~~N~l~~~~--~~~~~l~~L~~L~l~~N~l~~~~p~~----------~~~~~~L~~l~l~~N~l~~ 207 (633)
|++|++++.+ ..+..+++|++|++++|.+++.+|.. +..+++|+.|| +|.++.
T Consensus 122 l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred CCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 9999999865 47889999999999999999876653 78899999997 777643
No 378
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.44 E-value=5.6e-13 Score=141.63 Aligned_cols=124 Identities=24% Similarity=0.233 Sum_probs=94.5
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
..+++.|++++|++++. + ++++++|+.|+|++|+|++ ++ ++.+++|++|++++|+..+.+ .+..+++|+.|+
T Consensus 105 l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp CTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 45789999999999885 3 8889999999999999988 43 777888888888888655565 467777888888
Q ss_pred ccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 153 LSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 153 l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
|++|++++.+ +..+++|+.|++++|+|++. .++.+++|+.|++++|++..+|
T Consensus 177 ls~n~l~~l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip 228 (457)
T 3bz5_A 177 CSFNKITELD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEID 228 (457)
T ss_dssp CCSSCCCCCC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCC
T ss_pred CCCCccceec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccC
Confidence 8888887764 66677777777777777753 2666777777777777776654
No 379
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.43 E-value=3.9e-13 Score=147.35 Aligned_cols=57 Identities=25% Similarity=0.239 Sum_probs=28.9
Q ss_pred CCCCEEEccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 146 IRLRVLDLSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 146 ~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
++|+.|+|++|+|++.+ ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+.+|
T Consensus 221 ~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~~lp 277 (622)
T 3g06_A 221 SGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLTRLP 277 (622)
T ss_dssp TTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCCSCC
T ss_pred CCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCCcCC
Confidence 44555555555555543 23345555555555555 3333 3445555555555555443
No 380
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.43 E-value=2.7e-13 Score=139.00 Aligned_cols=106 Identities=22% Similarity=0.238 Sum_probs=94.7
Q ss_pred cEEEccCC-CCCCCCchhccCCCCCcEEEccC-ccCCCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCc
Q 006739 101 RELSLANN-SLVDLLPPQIVDCKKLEILNVQN-NQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLA 177 (633)
Q Consensus 101 ~~L~l~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~ 177 (633)
..++++++ +|++ +|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++.+ ..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35799998 9988 888 99999999999996 9999888889999999999999999999988 578999999999999
Q ss_pred CCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 178 KNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 178 ~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
+|+|++..+..|..++ |+.|+|++|+|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSC 119 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCG
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCC
Confidence 9999976666666665 999999999998753
No 381
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.42 E-value=3.4e-13 Score=147.86 Aligned_cols=117 Identities=27% Similarity=0.291 Sum_probs=74.0
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.+++.|+|++|+|+.+ |. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|+ .+|. .+++|+.|+|
T Consensus 61 ~~L~~L~L~~N~l~~l-p~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLTSL-PA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCSCC-CC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEEC
T ss_pred CCCcEEEecCCCCCCC-CC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEEC
Confidence 3567777777777653 33 45667777777777765 454 5667777777777777 3444 4566777777
Q ss_pred cCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 154 SGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 154 ~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
++|+|++.+.. +++|++|+|++|+|++ +|.. +.+|+.|++++|+|+.+|
T Consensus 129 ~~N~l~~lp~~---l~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l~ 177 (622)
T 3g06_A 129 FGNQLTSLPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTSLP 177 (622)
T ss_dssp CSSCCSCCCCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCC
T ss_pred CCCCCCcCCCC---CCCCCEEECcCCcCCC-cCCc---cCCCCEEECCCCCCCCCc
Confidence 77777765543 3677777777777774 4432 345556666666665544
No 382
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.41 E-value=1.2e-12 Score=139.06 Aligned_cols=123 Identities=28% Similarity=0.336 Sum_probs=104.2
Q ss_pred eeeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEE
Q 006739 73 VLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLD 152 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (633)
+.+++.|++++|.+++ +|.. +++|+.|++++|++++ +|.. .++|++|+|++|++++ +| .|+.+++|++|+
T Consensus 90 ~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 90 PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 3479999999999998 5543 4789999999999987 4432 2799999999999995 88 699999999999
Q ss_pred ccCCcCCCCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCc
Q 006739 153 LSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPI 210 (633)
Q Consensus 153 l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~ 210 (633)
+++|++++.+.. .++|++|++++|++++ +| .++.+++|+.|++++|++..+|.
T Consensus 160 l~~N~l~~lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~ 212 (454)
T 1jl5_A 160 VDNNSLKKLPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPD 212 (454)
T ss_dssp CCSSCCSCCCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCC
T ss_pred CCCCcCcccCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCC
Confidence 999999987654 3599999999999996 67 68999999999999999987653
No 383
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.40 E-value=2.1e-14 Score=146.67 Aligned_cols=128 Identities=22% Similarity=0.256 Sum_probs=68.8
Q ss_pred eeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCC-CchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDL-LPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
+++.|++++|.+.+..+. +.++++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|+.|+|
T Consensus 71 ~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp TCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred cceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 455556666655554433 33455566666666555543 4555555556666666665555555555555555555555
Q ss_pred cCC-cCCC--CCccCCCCCCCCeEeCcCC-cCCcc-CCcccccCC-CCCeeccCCC
Q 006739 154 SGN-SFSG--NLGFLKYFPNLEHLSLAKN-LFTGK-VPTSIRTFR-NLQFFDFSGN 203 (633)
Q Consensus 154 ~~N-~l~~--~~~~~~~l~~L~~L~l~~N-~l~~~-~p~~~~~~~-~L~~l~l~~N 203 (633)
++| .+++ .+..+..+++|+.|++++| ++++. ++..+..++ +|+.|++++|
T Consensus 150 ~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 150 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred CCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 555 4443 2233444555555555555 55532 344455555 5555555555
No 384
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.38 E-value=3.8e-14 Score=147.67 Aligned_cols=132 Identities=22% Similarity=0.349 Sum_probs=61.8
Q ss_pred eeEEEEecCCCCc-ccCC---ccccCCccccEEEccCCCCCC-----CCchhccCCCCCcEEEccCccCC----CCCccc
Q 006739 75 KITKLVFVPRELT-GVLS---PSIGRLSELRELSLANNSLVD-----LLPPQIVDCKKLEILNVQNNQFS----GTIPSD 141 (633)
Q Consensus 75 ~~~~L~l~~n~l~-~~~~---~~~~~l~~L~~L~l~~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~ 141 (633)
+++.|+|++|+++ +.++ ..+..+++|+.|+|++|+|+. ..|..+..+++|+.|+|++|.|+ +.+|..
T Consensus 160 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~ 239 (386)
T 2ca6_A 160 PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239 (386)
T ss_dssp CCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred CCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH
Confidence 4455555555544 1222 234444455555555555541 12224445555555555555553 344444
Q ss_pred ccCCCCCCEEEccCCcCCCC-----CccC--CCCCCCCeEeCcCCcCCc----cCCccc-ccCCCCCeeccCCCCCC
Q 006739 142 LSSLIRLRVLDLSGNSFSGN-----LGFL--KYFPNLEHLSLAKNLFTG----KVPTSI-RTFRNLQFFDFSGNSLL 206 (633)
Q Consensus 142 ~~~l~~L~~L~l~~N~l~~~-----~~~~--~~l~~L~~L~l~~N~l~~----~~p~~~-~~~~~L~~l~l~~N~l~ 206 (633)
+..+++|+.|+|++|.+++. +..+ ..+++|+.|+|++|.|++ .+|..+ .++++|+.|++++|++.
T Consensus 240 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred HccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 55555555555555555443 1222 224555555555555554 244444 33455555555555553
No 385
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.37 E-value=9.9e-14 Score=143.13 Aligned_cols=135 Identities=21% Similarity=0.256 Sum_probs=92.4
Q ss_pred eeEEEEecCCCCcccCC----ccccCCc-cccEEEccCCCCCCCCchhccCC-----CCCcEEEccCccCCCCCccccc-
Q 006739 75 KITKLVFVPRELTGVLS----PSIGRLS-ELRELSLANNSLVDLLPPQIVDC-----KKLEILNVQNNQFSGTIPSDLS- 143 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~----~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~- 143 (633)
+++.|+|++|.+++..+ ..|.+++ +|++|+|++|.|++..+..+..+ ++|++|+|++|++++..+..++
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 47788888888777665 5666777 78888888888877666666664 7788888888888766665433
Q ss_pred ---CC-CCCCEEEccCCcCCCCCc-----cCCC-CCCCCeEeCcCCcCCccC----CcccccCC-CCCeeccCCCCCCCC
Q 006739 144 ---SL-IRLRVLDLSGNSFSGNLG-----FLKY-FPNLEHLSLAKNLFTGKV----PTSIRTFR-NLQFFDFSGNSLLEG 208 (633)
Q Consensus 144 ---~l-~~L~~L~l~~N~l~~~~~-----~~~~-l~~L~~L~l~~N~l~~~~----p~~~~~~~-~L~~l~l~~N~l~~~ 208 (633)
.+ ++|+.|+|++|++++... .+.. .++|++|+|++|+|++.. +..+..++ +|+.|+|++|++...
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~ 182 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchh
Confidence 33 678888888888776652 2333 357888888888777433 33344454 778888888877554
Q ss_pred C
Q 006739 209 P 209 (633)
Q Consensus 209 ~ 209 (633)
.
T Consensus 183 ~ 183 (362)
T 3goz_A 183 N 183 (362)
T ss_dssp C
T ss_pred h
Confidence 4
No 386
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.36 E-value=4.3e-14 Score=147.31 Aligned_cols=132 Identities=20% Similarity=0.275 Sum_probs=68.3
Q ss_pred eeEEEEecCCCCcc----cCCccccCCccccEEEccCCCCCCCCchh----ccCC---------CCCcEEEccCccCC-C
Q 006739 75 KITKLVFVPRELTG----VLSPSIGRLSELRELSLANNSLVDLLPPQ----IVDC---------KKLEILNVQNNQFS-G 136 (633)
Q Consensus 75 ~~~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~p~~----~~~l---------~~L~~L~Ls~N~l~-~ 136 (633)
+++.|+|++|.+++ .++..+.++++|++|+|++|.|+...+.. +..+ ++|++|+|++|+++ +
T Consensus 95 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~ 174 (386)
T 2ca6_A 95 KLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENG 174 (386)
T ss_dssp TCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGG
T ss_pred cccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcH
Confidence 45555555555554 24444555555555555555554322222 2222 55555555555554 2
Q ss_pred CCc---ccccCCCCCCEEEccCCcCC--C---CCc-cCCCCCCCCeEeCcCCcCC----ccCCcccccCCCCCeeccCCC
Q 006739 137 TIP---SDLSSLIRLRVLDLSGNSFS--G---NLG-FLKYFPNLEHLSLAKNLFT----GKVPTSIRTFRNLQFFDFSGN 203 (633)
Q Consensus 137 ~~p---~~~~~l~~L~~L~l~~N~l~--~---~~~-~~~~l~~L~~L~l~~N~l~----~~~p~~~~~~~~L~~l~l~~N 203 (633)
.+| ..+..+++|+.|+|++|+++ | ..+ .+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+|++|
T Consensus 175 ~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n 254 (386)
T 2ca6_A 175 SMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDC 254 (386)
T ss_dssp GHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTC
T ss_pred HHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCC
Confidence 333 24445555666666666555 2 112 4555556666666666654 345555555666666666666
Q ss_pred CCC
Q 006739 204 SLL 206 (633)
Q Consensus 204 ~l~ 206 (633)
++.
T Consensus 255 ~i~ 257 (386)
T 2ca6_A 255 LLS 257 (386)
T ss_dssp CCC
T ss_pred CCc
Confidence 553
No 387
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.36 E-value=5.4e-14 Score=143.54 Aligned_cols=134 Identities=23% Similarity=0.261 Sum_probs=115.7
Q ss_pred eeeeEEEEecCCCCccc-CCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCc-cCCCC-CcccccCCCCCC
Q 006739 73 VLKITKLVFVPRELTGV-LSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNN-QFSGT-IPSDLSSLIRLR 149 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~ 149 (633)
..+++.|++++|.+++. ++..+.++++|++|+|++|.+++..|..+..+++|++|+|++| .+++. ++..+.++++|+
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 45899999999999876 7778899999999999999998888889999999999999999 68753 677788999999
Q ss_pred EEEccCC-cCCCC--CccCCCCC-CCCeEeCcCC--cCC-ccCCcccccCCCCCeeccCCCC-CC
Q 006739 150 VLDLSGN-SFSGN--LGFLKYFP-NLEHLSLAKN--LFT-GKVPTSIRTFRNLQFFDFSGNS-LL 206 (633)
Q Consensus 150 ~L~l~~N-~l~~~--~~~~~~l~-~L~~L~l~~N--~l~-~~~p~~~~~~~~L~~l~l~~N~-l~ 206 (633)
.|+|++| .+++. +..+..++ +|+.|++++| .++ +.+|..+..+++|+.|++++|. ++
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~ 236 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLK 236 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCC
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCC
Confidence 9999999 88863 45677888 9999999999 565 5677788889999999999998 54
No 388
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.33 E-value=3.7e-13 Score=138.85 Aligned_cols=131 Identities=18% Similarity=0.188 Sum_probs=112.2
Q ss_pred EEEecCCCCcccCCccccCCccccEEEccCCCCCCCCc----hhccCCC-CCcEEEccCccCCCCCcccccCC-----CC
Q 006739 78 KLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLP----PQIVDCK-KLEILNVQNNQFSGTIPSDLSSL-----IR 147 (633)
Q Consensus 78 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 147 (633)
.+.++.|++++.+|..+...++|++|+|++|.|++..+ ..|..++ +|++|+|++|+|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46789999999988888888889999999999999766 7888998 99999999999998888888775 99
Q ss_pred CCEEEccCCcCCCCCc-----cCCCC-CCCCeEeCcCCcCCccCCccccc-----CCCCCeeccCCCCCCCC
Q 006739 148 LRVLDLSGNSFSGNLG-----FLKYF-PNLEHLSLAKNLFTGKVPTSIRT-----FRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 148 L~~L~l~~N~l~~~~~-----~~~~l-~~L~~L~l~~N~l~~~~p~~~~~-----~~~L~~l~l~~N~l~~~ 208 (633)
|+.|+|++|.+++... .+..+ ++|+.|+|++|+|++..+..+.. .++|++|+|++|++...
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 153 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIK 153 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGS
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHH
Confidence 9999999999997763 25555 89999999999999766655443 36999999999999743
No 389
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.29 E-value=4e-12 Score=130.37 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=105.3
Q ss_pred eeeeEEEEecCCCCcccCCc-cccCCccccE-EEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccc--------
Q 006739 73 VLKITKLVFVPRELTGVLSP-SIGRLSELRE-LSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDL-------- 142 (633)
Q Consensus 73 ~~~~~~L~l~~n~l~~~~~~-~~~~l~~L~~-L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-------- 142 (633)
..+++.|+|++|++.+.++. .|.++++|.. +++++|+|+.+.|..|.++++|++|++++|+|++..+..+
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 44789999999998776654 6888888765 6777889988778888999999999999998884433222
Q ss_pred -----------------cCC-CCCCEEEccCCcCCCCCccCCCCCCCCeEeCcC-CcCCccCC-cccccCCCCCeeccCC
Q 006739 143 -----------------SSL-IRLRVLDLSGNSFSGNLGFLKYFPNLEHLSLAK-NLFTGKVP-TSIRTFRNLQFFDFSG 202 (633)
Q Consensus 143 -----------------~~l-~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~-N~l~~~~p-~~~~~~~~L~~l~l~~ 202 (633)
..+ ..|+.|+|++|+|+.++.......+|+.|++++ |.++ .+| +.|..+++|+.|||++
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~ 211 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISR 211 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTT
T ss_pred hhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCC
Confidence 222 246778888888887776555667888888875 5566 555 5688999999999999
Q ss_pred CCCCCCCcc
Q 006739 203 NSLLEGPIP 211 (633)
Q Consensus 203 N~l~~~~~~ 211 (633)
|+|+.+|..
T Consensus 212 N~l~~lp~~ 220 (350)
T 4ay9_X 212 TRIHSLPSY 220 (350)
T ss_dssp SCCCCCCSS
T ss_pred CCcCccChh
Confidence 999888754
No 390
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.27 E-value=1e-11 Score=121.82 Aligned_cols=143 Identities=14% Similarity=0.082 Sum_probs=109.2
Q ss_pred hcCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC-CCccccc
Q 006739 336 EDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-HRNLLPL 414 (633)
Q Consensus 336 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l 414 (633)
.++|+....++.|+.+.||++.. +++.+++|......... ...+.+|+++++.+. +..+.++
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~---~~~~~vlK~~~~~~~~~--------------~~~~~~E~~~l~~l~~~~~vP~v 75 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVG---ENENLYLKMTDSRYKGT--------------TYDVEREKDMMLWLEGKLPVPKV 75 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEEC---SSCEEEEEEECGGGTTS--------------TTCHHHHHHHHHHHTTTSCCCCE
T ss_pred hccceeEeeccCCCCCeEEEEEC---CCCcEEEEeCCcccCCC--------------HHHHHHHHHHHHHHhcCCCCCeE
Confidence 35788888899999999999974 46889999875321000 124677888888874 6778899
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc----------------------
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHIS---------------------- 472 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~---------------------- 472 (633)
++++...+..|+||||++|.+|.+.... ......++.+++++|+.||..
T Consensus 76 ~~~~~~~~~~~lv~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~ 146 (263)
T 3tm0_A 76 LHFERHDGWSNLLMSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLL 146 (263)
T ss_dssp EEEEEETTEEEEEEECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHH
T ss_pred EEEEecCCceEEEEEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHH
Confidence 9999888889999999999998875311 112347888999999999861
Q ss_pred ----------------------------------CCCCeeeCCCCCCCeEecCCCceEEccccccc
Q 006739 473 ----------------------------------HNPRIIHRDLKPANVLLDDDMEARIADFGLAK 504 (633)
Q Consensus 473 ----------------------------------h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 504 (633)
....++|+|++|.||+++++..+.|+||+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 147 NNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred hccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 11568999999999999876556799998654
No 391
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.21 E-value=4.1e-13 Score=143.39 Aligned_cols=132 Identities=25% Similarity=0.194 Sum_probs=63.8
Q ss_pred eeEEEEecCCCCccc----CCccccCCccccEEEccCCCCCCCCchhccC-----CCCCcEEEccCccCCCC----Cccc
Q 006739 75 KITKLVFVPRELTGV----LSPSIGRLSELRELSLANNSLVDLLPPQIVD-----CKKLEILNVQNNQFSGT----IPSD 141 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~ 141 (633)
+++.|++++|++++. ++..+.++++|++|+|++|.+++..+..+.. .++|+.|+|++|.+++. ++..
T Consensus 257 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 336 (461)
T 1z7x_W 257 RLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSV 336 (461)
T ss_dssp CCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHH
Confidence 344444444444432 2333444444555555555443322222211 13555555555555433 3444
Q ss_pred ccCCCCCCEEEccCCcCCCCC-cc----CC-CCCCCCeEeCcCCcCCc----cCCcccccCCCCCeeccCCCCCC
Q 006739 142 LSSLIRLRVLDLSGNSFSGNL-GF----LK-YFPNLEHLSLAKNLFTG----KVPTSIRTFRNLQFFDFSGNSLL 206 (633)
Q Consensus 142 ~~~l~~L~~L~l~~N~l~~~~-~~----~~-~l~~L~~L~l~~N~l~~----~~p~~~~~~~~L~~l~l~~N~l~ 206 (633)
+..+++|+.|+|++|.+++.. .. +. ..++|+.|+|++|++++ .+|..+..+++|+.|++++|++.
T Consensus 337 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 337 LAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 445556666666666555432 11 11 14566666666666654 45555556666666666666654
No 392
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.14 E-value=2.9e-12 Score=131.93 Aligned_cols=134 Identities=17% Similarity=0.157 Sum_probs=96.8
Q ss_pred eeEEEEecCCCCcccCCccc-cCCccccEEEccCCCCCCCCchhc-----cCCCCCcEEEccCccCCC----CCcccccC
Q 006739 75 KITKLVFVPRELTGVLSPSI-GRLSELRELSLANNSLVDLLPPQI-----VDCKKLEILNVQNNQFSG----TIPSDLSS 144 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~----~~p~~~~~ 144 (633)
+++.|+|++|.++......+ ..+++|+.|+|++|.|+......+ ...++|+.|+|++|.|+. .++..+..
T Consensus 102 ~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~ 181 (372)
T 3un9_A 102 ALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAG 181 (372)
T ss_dssp CEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHT
T ss_pred CceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhc
Confidence 78888999888865433322 346678889999998876433333 346789999999998874 24455577
Q ss_pred CCCCCEEEccCCcCCCCC-----ccCCCCCCCCeEeCcCCcCCcc----CCcccccCCCCCeeccCCCCCCCC
Q 006739 145 LIRLRVLDLSGNSFSGNL-----GFLKYFPNLEHLSLAKNLFTGK----VPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 145 l~~L~~L~l~~N~l~~~~-----~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
+++|++|+|++|.|++.. ..+..+++|+.|+|++|.|+.. +...+...++|++|+|++|+|...
T Consensus 182 ~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 182 NTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp CSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred CCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 888999999999887532 4466677899999999988742 344556678899999999988543
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.14 E-value=3.6e-12 Score=136.02 Aligned_cols=108 Identities=20% Similarity=0.196 Sum_probs=47.4
Q ss_pred eeEEEEecCCCCcccCCcccc-----CCccccEEEccCCCCCCC----CchhccCCCCCcEEEccCccCCCCCccccc--
Q 006739 75 KITKLVFVPRELTGVLSPSIG-----RLSELRELSLANNSLVDL----LPPQIVDCKKLEILNVQNNQFSGTIPSDLS-- 143 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-- 143 (633)
+++.|++++|.+++..+..+. ..++|++|+|++|++++. ++..+..+++|+.|+|++|.++...+..+.
T Consensus 114 ~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~ 193 (461)
T 1z7x_W 114 TLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQG 193 (461)
T ss_dssp TCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHH
T ss_pred ceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHH
Confidence 555666666665443222211 133455555555555442 233344445555555555554432222222
Q ss_pred ---CCCCCCEEEccCCcCCCC-----CccCCCCCCCCeEeCcCCcCC
Q 006739 144 ---SLIRLRVLDLSGNSFSGN-----LGFLKYFPNLEHLSLAKNLFT 182 (633)
Q Consensus 144 ---~l~~L~~L~l~~N~l~~~-----~~~~~~l~~L~~L~l~~N~l~ 182 (633)
.+++|+.|+|++|.+++. +..+..+++|+.|++++|.++
T Consensus 194 l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 194 LKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 133444444444444432 122333444444444444443
No 394
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.12 E-value=9.1e-11 Score=114.81 Aligned_cols=137 Identities=12% Similarity=0.128 Sum_probs=96.2
Q ss_pred cCcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCc--cccc
Q 006739 337 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRN--LLPL 414 (633)
Q Consensus 337 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l 414 (633)
.++......+.|..+.||++.. .+|..+++|...... ...+.+|+++++.+.+.+ +.++
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~--~~g~~~vlK~~~~~~-----------------~~~~~~E~~~l~~l~~~~~~vP~~ 80 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSA--QGRPVLFVKTDLSGA-----------------LNELQDEAARLSWLATTGVPCAAV 80 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEEC--TTSCCEEEEEECSCT-----------------TSCHHHHHHHHHHHHTTTCCBCCE
T ss_pred CCCceEecccCCCCceEEEEec--CCCCeEEEEeCCccc-----------------chhhhHHHHHHHHHHhCCCCCCeE
Confidence 3455444444666799999965 367889999865431 123567788887775444 5568
Q ss_pred ceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISH--------------------- 473 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h--------------------- 473 (633)
+++....+..++||||++|.+|. ... .. ...++.++++.|..||...
T Consensus 81 ~~~~~~~~~~~~v~e~i~G~~l~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
T 1nd4_A 81 LDVVTEAGRDWLLLGEVPGQDLL--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRM 148 (264)
T ss_dssp EEEEECSSCEEEEEECCSSEETT--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHH
T ss_pred EEeccCCCCCEEEEEecCCcccC--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHH
Confidence 88888777889999999998874 211 11 2356777778888886421
Q ss_pred ----------------------------------CCCeeeCCCCCCCeEecCCCceEEccccccc
Q 006739 474 ----------------------------------NPRIIHRDLKPANVLLDDDMEARIADFGLAK 504 (633)
Q Consensus 474 ----------------------------------~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 504 (633)
...++|+|++|.||++++++.+.|+|||.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 149 EAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred hcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999887666799999764
No 395
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.04 E-value=6.5e-10 Score=114.27 Aligned_cols=145 Identities=15% Similarity=0.197 Sum_probs=105.7
Q ss_pred cccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC--CCcccccceee
Q 006739 341 SLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR--HRNLLPLLAHM 418 (633)
Q Consensus 341 ~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~ 418 (633)
.++.|+.|.++.||++.. ++..+++|+...+..... .....+.+|+++++.+. +..+++++.++
T Consensus 42 ~~~~l~~G~sn~~y~v~~---~~~~~vlr~~~~p~~~~~-----------~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~ 107 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVT---PGQTYVMRAKPGPKSKLL-----------PSAHAIEREYRVMDALAGTDVPVAKMYALC 107 (359)
T ss_dssp EEEECCC-CCSCEEEEEC---SSCEEEEECCCC---------------------CHHHHHHHHHHHTTSSSCCCCEEEEE
T ss_pred eEEEcCCcccceEEEEEE---CCceEEEEeCCCCCCCCC-----------CcHHHHHHHHHHHHHhhcCCCCCCcEEEEC
Confidence 357789999999999975 456788987641111000 01345778899998887 45678888888
Q ss_pred ecC---CccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------
Q 006739 419 ARP---DCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISH---------------------- 473 (633)
Q Consensus 419 ~~~---~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h---------------------- 473 (633)
.+. +..++||||++|..+.+.. ...++...+..++.++++.|+.||...
T Consensus 108 ~~~~~~g~~~~vme~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (359)
T 3dxp_A 108 EDESVIGRAFYIMEFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIER 181 (359)
T ss_dssp CCTTTTSSCEEEEECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHH
T ss_pred CCCCccCCeEEEEEecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHH
Confidence 766 4478999999997774311 123678888999999999999998621
Q ss_pred ---------------------------------CCCeeeCCCCCCCeEecCCCc--eEEcccccccc
Q 006739 474 ---------------------------------NPRIIHRDLKPANVLLDDDME--ARIADFGLAKA 505 (633)
Q Consensus 474 ---------------------------------~~~ivH~Dikp~Nill~~~~~--~kl~DfG~a~~ 505 (633)
...++|+|+++.||+++.++. +.|+||+.+..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 182 WTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 367999999999999997753 68999998765
No 396
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.04 E-value=3.5e-10 Score=114.80 Aligned_cols=38 Identities=13% Similarity=0.329 Sum_probs=21.8
Q ss_pred CccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCC
Q 006739 97 LSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFS 135 (633)
Q Consensus 97 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 135 (633)
+++|+.|+|.+ .++.+-+.+|.++++|+.|+|++|.++
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~ 137 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP 137 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc
Confidence 56666666666 555544455666666666666666543
No 397
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.02 E-value=3.6e-10 Score=114.65 Aligned_cols=133 Identities=14% Similarity=0.159 Sum_probs=87.6
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccC---------------------------------
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVD--------------------------------- 120 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~--------------------------------- 120 (633)
.+++.|+|.+ +++.+.+.+|.++++|+.|+|++|.++.+.+..|.+
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 4788999998 888877788999999999999999875443333333
Q ss_pred ---------------------------------------------CCCCcEEEccCccCCCCCcccccCCCCCCEEEccC
Q 006739 121 ---------------------------------------------CKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSG 155 (633)
Q Consensus 121 ---------------------------------------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 155 (633)
+++|+.|+|++|+++..-+..|.+|++|+.|+|++
T Consensus 180 ~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 180 TTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred eeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 45666666666666643344466666666666666
Q ss_pred CcCCCCC-ccCCCCCCCC-eEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCC
Q 006739 156 NSFSGNL-GFLKYFPNLE-HLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 156 N~l~~~~-~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
| ++... ..|.+|++|+ .+++.+ +++..-+..|..|++|+.+++++|++..++
T Consensus 260 n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~ 313 (329)
T 3sb4_A 260 N-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLG 313 (329)
T ss_dssp T-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEEC
T ss_pred c-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccc
Confidence 6 54444 4566666666 666666 555444556666666666666666665544
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.01 E-value=8.9e-12 Score=128.32 Aligned_cols=135 Identities=19% Similarity=0.160 Sum_probs=104.3
Q ss_pred eeeEEEEecCCCCcccCCccccCC-----ccccEEEccCCCCCCCCchhc-cCCCCCcEEEccCccCCCCCcccc-----
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRL-----SELRELSLANNSLVDLLPPQI-VDCKKLEILNVQNNQFSGTIPSDL----- 142 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~----- 142 (633)
..++.|+|++|.++......+..+ ++|+.|+|++|.|+......+ ..+++|+.|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 368999999999987544443333 789999999999976323333 346789999999999985444444
Q ss_pred cCCCCCCEEEccCCcCCCCC-----ccCCCCCCCCeEeCcCCcCCcc----CCcccccCCCCCeeccCCCCCCCC
Q 006739 143 SSLIRLRVLDLSGNSFSGNL-----GFLKYFPNLEHLSLAKNLFTGK----VPTSIRTFRNLQFFDFSGNSLLEG 208 (633)
Q Consensus 143 ~~l~~L~~L~l~~N~l~~~~-----~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~~~~L~~l~l~~N~l~~~ 208 (633)
...++|+.|+|++|.|+... ..+..+++|++|+|++|.|+.. ++..+...++|+.|+|++|.|...
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~ 226 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDT 226 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHH
Confidence 34689999999999997632 3457789999999999999843 356677888999999999999653
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.98 E-value=3.7e-11 Score=116.28 Aligned_cols=104 Identities=22% Similarity=0.246 Sum_probs=75.8
Q ss_pred ccCCccccE--EEccCCCCCCCCch----hccCCCCCcEEEccCccCCC--CCcccccCCCCCCEEEccCCcCCCCC--c
Q 006739 94 IGRLSELRE--LSLANNSLVDLLPP----QIVDCKKLEILNVQNNQFSG--TIPSDLSSLIRLRVLDLSGNSFSGNL--G 163 (633)
Q Consensus 94 ~~~l~~L~~--L~l~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~--~ 163 (633)
|...+.|.. ++++.|.... ++. ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.. .
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~-~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~ 215 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSC-MAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELD 215 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHH-HHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGG
T ss_pred cCCCcchhhcCccccCCHHHH-HHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhh
Confidence 334444554 6777775432 332 22568899999999999997 45567778999999999999998863 3
Q ss_pred cCCCCCCCCeEeCcCCcCCccCCc-------ccccCCCCCeec
Q 006739 164 FLKYFPNLEHLSLAKNLFTGKVPT-------SIRTFRNLQFFD 199 (633)
Q Consensus 164 ~~~~l~~L~~L~l~~N~l~~~~p~-------~~~~~~~L~~l~ 199 (633)
.+..+ +|+.|+|++|.+.+.+|+ .+..+++|+.||
T Consensus 216 ~l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 216 KIKGL-KLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGTTS-CCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hcccC-CcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 34444 899999999999887763 367788998886
No 400
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.86 E-value=7.5e-10 Score=110.97 Aligned_cols=187 Identities=18% Similarity=0.210 Sum_probs=119.1
Q ss_pred ccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC-CCc--ccccceee
Q 006739 342 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-HRN--LLPLLAHM 418 (633)
Q Consensus 342 ~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~ 418 (633)
++.++.|....||++. ..+++|+.... .....+.+|.++++.+. +.. +.+.+...
T Consensus 25 i~~~~~G~~n~v~~v~------~~~vlR~~~~~----------------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~ 82 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN------RDFIFKFPKHS----------------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTG 82 (304)
T ss_dssp CCEEEECSSEEEEEST------TSEEEEEESSH----------------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEEC
T ss_pred eEecCCCCcceEEEEC------CEEEEEecCCc----------------chHHHHHHHHHHHHHHHhcCCCCCCceEeec
Confidence 4568999999999872 35888875321 01346788898988773 333 34455444
Q ss_pred ecCC---ccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----------------------
Q 006739 419 ARPD---CHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHIS----------------------- 472 (633)
Q Consensus 419 ~~~~---~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~----------------------- 472 (633)
...+ ..|+||||++|.++.+... ..++..++..++.++++.++.||..
T Consensus 83 ~~~~~~~~~~~vm~~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (304)
T 3sg8_A 83 MPSETYQMSFAGFTKIKGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKK 156 (304)
T ss_dssp CCCSSCSCSCEEEECCCCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHH
T ss_pred CCCCCCCcceEEEcccCCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHH
Confidence 3333 3478999999988865332 2366677778888888888888741
Q ss_pred --------------------------------CCCCeeeCCCCCCCeEecC--CCceEEcccccccccCCCCCcceecc-
Q 006739 473 --------------------------------HNPRIIHRDLKPANVLLDD--DMEARIADFGLAKAMPDAQTHITTSN- 517 (633)
Q Consensus 473 --------------------------------h~~~ivH~Dikp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~~~~- 517 (633)
....++|+|++|.||++++ +..+.|+||+.+..-...........
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~ 236 (304)
T 3sg8_A 157 IKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMED 236 (304)
T ss_dssp HHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCT
T ss_pred HHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhh
Confidence 1246899999999999998 45678999998875432211000000
Q ss_pred -----------cccCccccc-ccccccCCCCCccchHHHHHHHHHHHhCCCCC
Q 006739 518 -----------VAGTVGYIA-PEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPS 558 (633)
Q Consensus 518 -----------~~gt~~y~a-PE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~ 558 (633)
.....++.. |+.... .....+.|+++.++|++.+|+.+|
T Consensus 237 ~~~~~~~~~~~~l~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 237 DEEYGMEFVSKILNHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TTSCCHHHHHHHHHHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred ccccCHHHHHHHHHHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 000001111 222211 112368999999999999998775
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.85 E-value=2.3e-10 Score=126.07 Aligned_cols=135 Identities=19% Similarity=0.252 Sum_probs=93.0
Q ss_pred eeEEEEecCCCCcccCCccccC-CccccEEEcc----CCCCCCC-----CchhccCCCCCcEEEccCc--cCCCCCcccc
Q 006739 75 KITKLVFVPRELTGVLSPSIGR-LSELRELSLA----NNSLVDL-----LPPQIVDCKKLEILNVQNN--QFSGTIPSDL 142 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~ 142 (633)
+++.|+++.|++++.....++. +++|+.|+|+ .|.+++. ++..+.++++|+.|+|++| .+++..+..+
T Consensus 379 ~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~ 458 (592)
T 3ogk_B 379 ELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYI 458 (592)
T ss_dssp TCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHH
T ss_pred cCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHH
Confidence 5677777777776655555544 7777777775 6677663 3334666788888888643 3665555444
Q ss_pred c-CCCCCCEEEccCCcCCCCC--ccCCCCCCCCeEeCcCCcCCcc-CCcccccCCCCCeeccCCCCCCCCC
Q 006739 143 S-SLIRLRVLDLSGNSFSGNL--GFLKYFPNLEHLSLAKNLFTGK-VPTSIRTFRNLQFFDFSGNSLLEGP 209 (633)
Q Consensus 143 ~-~l~~L~~L~l~~N~l~~~~--~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~~~~L~~l~l~~N~l~~~~ 209 (633)
+ .+++|+.|+|++|++++.. ..+..+++|+.|+|++|.|++. ++..+..+++|+.|+|++|+++...
T Consensus 459 ~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~ 529 (592)
T 3ogk_B 459 GQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTG 529 (592)
T ss_dssp HHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTC
T ss_pred HHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHH
Confidence 4 3788888888888887532 4456788899999999988754 3444567888999999999876543
No 402
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.73 E-value=1.8e-09 Score=99.41 Aligned_cols=116 Identities=14% Similarity=0.155 Sum_probs=90.9
Q ss_pred CCccccCCccccEEEccCC-CCCCC----CchhccCCCCCcEEEccCccCCCC----CcccccCCCCCCEEEccCCcCCC
Q 006739 90 LSPSIGRLSELRELSLANN-SLVDL----LPPQIVDCKKLEILNVQNNQFSGT----IPSDLSSLIRLRVLDLSGNSFSG 160 (633)
Q Consensus 90 ~~~~~~~l~~L~~L~l~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 160 (633)
+...+...+.|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4445777889999999999 88652 445667788999999999999742 34455666889999999999986
Q ss_pred C-----CccCCCCCCCCeEeC--cCCcCCcc----CCcccccCCCCCeeccCCCCC
Q 006739 161 N-----LGFLKYFPNLEHLSL--AKNLFTGK----VPTSIRTFRNLQFFDFSGNSL 205 (633)
Q Consensus 161 ~-----~~~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~~~~L~~l~l~~N~l 205 (633)
. ...+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 4 256777889999999 88999853 345566678999999999987
No 403
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.67 E-value=5.3e-09 Score=115.13 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=62.8
Q ss_pred eeEEEEecCCC-Ccc-cCCccccCCccccEEEccCCCCCCC----CchhccCCCCCcEEEccCccCCC----CCcccccC
Q 006739 75 KITKLVFVPRE-LTG-VLSPSIGRLSELRELSLANNSLVDL----LPPQIVDCKKLEILNVQNNQFSG----TIPSDLSS 144 (633)
Q Consensus 75 ~~~~L~l~~n~-l~~-~~~~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~ 144 (633)
+++.|+|++|. ++. .++....++++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 37777777765 211 1122234667777777777777654 33445567777777777777762 33444556
Q ss_pred CCCCCEEEccCCcCCCCCccCCCCCCCCeEeCc
Q 006739 145 LIRLRVLDLSGNSFSGNLGFLKYFPNLEHLSLA 177 (633)
Q Consensus 145 l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~ 177 (633)
+++|+.|+|++|.+.+.+..+..+++|+.|+++
T Consensus 219 ~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~ 251 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILELVGFFKAAANLEEFCGG 251 (592)
T ss_dssp CTTCCEEECSSCBGGGGHHHHHHCTTCCEEEEC
T ss_pred CCCCcEEeccCccHHHHHHHHhhhhHHHhhccc
Confidence 777777777777766654444455555555554
No 404
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.61 E-value=1.1e-07 Score=95.71 Aligned_cols=137 Identities=14% Similarity=0.208 Sum_probs=96.8
Q ss_pred CcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC----Ccccc
Q 006739 338 GLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRH----RNLLP 413 (633)
Q Consensus 338 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~ 413 (633)
.....+.++.|....||++ |..+++|+..... ....+.+|.++++.+.+ ..+.+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v------g~~~vlR~~~~~~----------------~~~~~~~E~~~L~~L~~~~~~~~vP~ 95 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC------NEQYVVKVPKRDS----------------VRISQKRELELYRFLENCKLSYQIPA 95 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE------TTTEEEEEESSHH----------------HHHHHHHHHHHHHHHTTSCCSSBCCC
T ss_pred ceEEEEeCCCCCCceEEEE------CCEEEEEeCCcHH----------------HHHHHHHHHHHHHHHHhcCCCCCcce
Confidence 4455678999999999987 4468888752110 02347788888888765 22445
Q ss_pred cceeeecCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------
Q 006739 414 LLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISH-------------------- 473 (633)
Q Consensus 414 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h-------------------- 473 (633)
++++ +..++||||++|.++.+... ..++..++..++.++++.++.||...
T Consensus 96 v~~~----~~~~lvme~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~ 165 (320)
T 3r70_A 96 VVYQ----SDRFNIMKYIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFL 165 (320)
T ss_dssp EEEE----CSSCEEEECCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHH
T ss_pred EEec----CCcEEEEeecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHH
Confidence 5554 56789999999988864321 12556666777777777777777321
Q ss_pred ----------------------------------------CCCeeeCCCCCCCeEecCCCceEEccccccccc
Q 006739 474 ----------------------------------------NPRIIHRDLKPANVLLDDDMEARIADFGLAKAM 506 (633)
Q Consensus 474 ----------------------------------------~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 506 (633)
...++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 166 QDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 234599999999999999666799999988653
No 405
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.59 E-value=6.4e-09 Score=100.59 Aligned_cols=79 Identities=29% Similarity=0.466 Sum_probs=65.1
Q ss_pred cCCccccEEEccCCCCCC--CCchhccCCCCCcEEEccCccCCCCCcccccCCC--CCCEEEccCCcCCCCC--------
Q 006739 95 GRLSELRELSLANNSLVD--LLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLI--RLRVLDLSGNSFSGNL-------- 162 (633)
Q Consensus 95 ~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~-------- 162 (633)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++..
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 468899999999999999 3457778999999999999999964 3344454 9999999999998743
Q ss_pred ccCCCCCCCCeEe
Q 006739 163 GFLKYFPNLEHLS 175 (633)
Q Consensus 163 ~~~~~l~~L~~L~ 175 (633)
..+..+|+|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2367789999886
No 406
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.55 E-value=2.9e-07 Score=90.32 Aligned_cols=136 Identities=17% Similarity=0.210 Sum_probs=94.7
Q ss_pred cccccccCe-eEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC-CCcccccceeeec
Q 006739 343 EKIGSGGCG-EVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR-HRNLLPLLAHMAR 420 (633)
Q Consensus 343 ~~ig~G~~g-~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 420 (633)
+.+..|..| .||+.... .++..+++|+..... ...+.+|...++.+. +-.+.++++++.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~-~~~~~~~lk~~~~~~-----------------~~~~~~E~~~l~~l~~~vPVP~v~~~~~~ 91 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGK-PNAPELFLKHGKGSV-----------------ANDVTDEMVRLNWLTAFMPLPTIKHFIRT 91 (272)
T ss_dssp EEEECSSSSCEEEEEECC-TTCCCEEEEEEETHH-----------------HHHHHHHHHHHHHHTTTSCCCCEEEEEEE
T ss_pred EEccCCCcCCeEEEEEec-CCCeEEEEEECCCCC-----------------HhHHHHHHHHHHHhccCCCcCeEEEEEEE
Confidence 345556665 68987643 456789999753210 345677888887774 3447788999998
Q ss_pred CCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------
Q 006739 421 PDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHI----------------------------- 471 (633)
Q Consensus 421 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~----------------------------- 471 (633)
.+..++|||+++|.++.+...... .....++.++++.|..||.
T Consensus 92 ~~~~~lvme~l~G~~~~~~~~~~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (272)
T 4gkh_A 92 PDDAWLLTTAIPGKTAFQVLEEYP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVD 163 (272)
T ss_dssp TTEEEEEEECCCSEEHHHHHHHCG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCC
T ss_pred CCeEEEEEEeeCCccccccccCCH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhh
Confidence 899999999999988876653211 1233456666666666661
Q ss_pred --------------------------cCCCCeeeCCCCCCCeEecCCCceEEccccccc
Q 006739 472 --------------------------SHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 504 (633)
Q Consensus 472 --------------------------~h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 504 (633)
.+...++|+|+.+.||++++++.+-|+||+.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 164 ASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp GGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred hhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 122347999999999999987767799999764
No 407
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=8.1e-09 Score=95.03 Aligned_cols=108 Identities=16% Similarity=0.174 Sum_probs=87.9
Q ss_pred eeEEEEecCC-CCccc----CCccccCCccccEEEccCCCCCCC----CchhccCCCCCcEEEccCccCCCC----Cccc
Q 006739 75 KITKLVFVPR-ELTGV----LSPSIGRLSELRELSLANNSLVDL----LPPQIVDCKKLEILNVQNNQFSGT----IPSD 141 (633)
Q Consensus 75 ~~~~L~l~~n-~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 141 (633)
.++.|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.. +...
T Consensus 37 ~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~ 116 (185)
T 1io0_A 37 DLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEA 116 (185)
T ss_dssp TCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHG
T ss_pred CCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHH
Confidence 7899999999 88653 344567788999999999999752 345566678999999999999853 4566
Q ss_pred ccCCCCCCEEEc--cCCcCCCCC-----ccCCCCCCCCeEeCcCCcCC
Q 006739 142 LSSLIRLRVLDL--SGNSFSGNL-----GFLKYFPNLEHLSLAKNLFT 182 (633)
Q Consensus 142 ~~~l~~L~~L~l--~~N~l~~~~-----~~~~~l~~L~~L~l~~N~l~ 182 (633)
+...++|+.|+| ++|.|+... ..+...++|+.|+|++|.+.
T Consensus 117 L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 117 LQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 778889999999 889998642 45666789999999999986
No 408
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.50 E-value=4.3e-09 Score=115.93 Aligned_cols=108 Identities=12% Similarity=0.114 Sum_probs=49.5
Q ss_pred CccccEEEccCCCCCCCCchhcc-CCCCCcEEEcc--C----ccCCCC-----CcccccCCCCCCEEEccCCcCCCCC-c
Q 006739 97 LSELRELSLANNSLVDLLPPQIV-DCKKLEILNVQ--N----NQFSGT-----IPSDLSSLIRLRVLDLSGNSFSGNL-G 163 (633)
Q Consensus 97 l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~l~~N~l~~~~-~ 163 (633)
+++|+.|+++.|.+++..+..+. .+++|+.|+|+ + |.+++. ++..+..+++|+.|+|++ .+++.. .
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 45555555555555543333333 35555555555 2 344411 111134455555555544 333221 2
Q ss_pred cCCC-CCCCCeEeCcCCcCCccCCccc-ccCCCCCeeccCCCCC
Q 006739 164 FLKY-FPNLEHLSLAKNLFTGKVPTSI-RTFRNLQFFDFSGNSL 205 (633)
Q Consensus 164 ~~~~-l~~L~~L~l~~N~l~~~~p~~~-~~~~~L~~l~l~~N~l 205 (633)
.+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 2222 4555555555555543333332 3455555555555554
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.46 E-value=5e-08 Score=99.44 Aligned_cols=130 Identities=15% Similarity=0.212 Sum_probs=75.4
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhcc--CCCCCcEEEccC--ccCCCC-----Ccccc--
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIV--DCKKLEILNVQN--NQFSGT-----IPSDL-- 142 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~-- 142 (633)
++++.|+|++|.-.. +++ +. +++|+.|+|..|.++......+. .+++|+.|+|+. |...+. +...+
T Consensus 172 P~L~~L~L~g~~~l~-l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 172 PLLNNLKIKGTNNLS-IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp TTCCEEEEECCBTCB-CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCCcEEEEeCCCCce-ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc
Confidence 367777777663111 222 32 66777777777766542223333 577788877753 221111 11122
Q ss_pred cCCCCCCEEEccCCcCCCCC----ccCCCCCCCCeEeCcCCcCCcc----CCcccccCCCCCeeccCCCCCC
Q 006739 143 SSLIRLRVLDLSGNSFSGNL----GFLKYFPNLEHLSLAKNLFTGK----VPTSIRTFRNLQFFDFSGNSLL 206 (633)
Q Consensus 143 ~~l~~L~~L~l~~N~l~~~~----~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~~~~L~~l~l~~N~l~ 206 (633)
..+++|+.|+|++|.+++.. .....+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.|+
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 24677888888877776422 1113467788888888877753 3444456677888888877764
No 410
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.42 E-value=1.5e-08 Score=111.57 Aligned_cols=63 Identities=21% Similarity=0.245 Sum_probs=26.7
Q ss_pred CccccEEEccCCCCCCCCchhcc-CCCCCcEEEccCc-cCCCC-CcccccCCCCCCEEEccCCcCC
Q 006739 97 LSELRELSLANNSLVDLLPPQIV-DCKKLEILNVQNN-QFSGT-IPSDLSSLIRLRVLDLSGNSFS 159 (633)
Q Consensus 97 l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~l~~N~l~ 159 (633)
+++|++|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++..+.++++|++|+|++|.++
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~ 169 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVD 169 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEE
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccC
Confidence 34444555554444443333332 3444555555444 23211 2222234444455555444443
No 411
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.42 E-value=1.2e-06 Score=86.46 Aligned_cols=143 Identities=20% Similarity=0.206 Sum_probs=91.0
Q ss_pred ccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCC---cccccce
Q 006739 340 ASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHR---NLLPLLA 416 (633)
Q Consensus 340 ~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~ 416 (633)
...+.|+.|.++.||++... +|+.++||+........ ...+.+|++.++.+++. .++++++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~--dG~~~vvK~~~~~~~~~--------------~~~~~~E~~~L~~L~~~~~v~vP~v~~ 81 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELA--DGTPLFVKALPDDAPAL--------------DGLFRAEALGLDWLGRSFGSPVPQVAG 81 (288)
T ss_dssp EEEEEEEEETTEEEEEEEET--TSCEEEEEECCTTCCCC--------------TTHHHHHHHHHHHHTCSTTCCSCCEEE
T ss_pred cceeeeCCcchhheEEEEeC--CCCeEEEEecCCCCcch--------------hHHHHHHHHHHHHHHhcCCCCcCeEEE
Confidence 34678999999999999864 78999999864321100 23578899999999865 4677777
Q ss_pred eeecCCccEEEEecccCCCHH--------H---HHhhhcCC--CC---------------CCCHHHHH---HH-------
Q 006739 417 HMARPDCHLLVYEFMKNGSLQ--------D---ILNDVSQG--RR---------------ELDWLARH---KI------- 458 (633)
Q Consensus 417 ~~~~~~~~~lv~e~~~~gsL~--------~---~l~~~~~~--~~---------------~l~~~~~~---~i------- 458 (633)
+. ..++||||++++++. + .+|..... +. .-+|.... ++
T Consensus 82 ~~----~~~lvme~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a 157 (288)
T 3d1u_A 82 WD----DRTLAMEWVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRA 157 (288)
T ss_dssp EE----TTEEEEECCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHH
T ss_pred ec----CcEEEEEecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 63 468999999998753 1 23332211 00 01333211 00
Q ss_pred ----------HHHHHHHHHHHH----hcCCCCeeeCCCCCCCeEecCCCceEEccccccc
Q 006739 459 ----------ALGVACGLEYLH----ISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 504 (633)
Q Consensus 459 ----------~~~ia~~L~~Lh----~~h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 504 (633)
...+-+.++.+. ......++|+|+.+.||+++.+ .+.|+|| .+.
T Consensus 158 ~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 158 ADRGALTPGDVRLVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHTTSSCHHHHHHHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 111112222232 1235789999999999999984 5889999 553
No 412
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.41 E-value=1.1e-06 Score=91.05 Aligned_cols=131 Identities=14% Similarity=0.184 Sum_probs=73.2
Q ss_pred eeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEcc
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLS 154 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (633)
+++.+.+.+ .++.+-+..|.++++|+.++|++|+++.+-...|. ..+|+.+.|..| ++..-...|.++++|+.++|.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 455666654 55555555666666666666666665553333333 355555555422 442333344445455544444
Q ss_pred CC---------------------cCCCCC-ccCCCCCCCCeEeCcCCcCC-----ccCCcccccCCCCCeeccCCCCCCC
Q 006739 155 GN---------------------SFSGNL-GFLKYFPNLEHLSLAKNLFT-----GKVPTSIRTFRNLQFFDFSGNSLLE 207 (633)
Q Consensus 155 ~N---------------------~l~~~~-~~~~~l~~L~~L~l~~N~l~-----~~~p~~~~~~~~L~~l~l~~N~l~~ 207 (633)
.| +++... ..|.+|++|+.+++.+|.+. ..-+..|..|++|+.++|.+ .+..
T Consensus 235 ~~l~~I~~~aF~~~~L~~i~lp~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~ 313 (401)
T 4fdw_A 235 ENVSTIGQEAFRESGITTVKLPNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRI 313 (401)
T ss_dssp TTCCEECTTTTTTCCCSEEEEETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCE
T ss_pred CCccCccccccccCCccEEEeCCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEE
Confidence 32 233222 45677788888888777765 34456677788888888773 3544
Q ss_pred CC
Q 006739 208 GP 209 (633)
Q Consensus 208 ~~ 209 (633)
++
T Consensus 314 I~ 315 (401)
T 4fdw_A 314 LG 315 (401)
T ss_dssp EC
T ss_pred Eh
Confidence 43
No 413
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.40 E-value=6.9e-07 Score=92.66 Aligned_cols=147 Identities=12% Similarity=0.112 Sum_probs=107.0
Q ss_pred eeeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEc
Q 006739 74 LKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDL 153 (633)
Q Consensus 74 ~~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (633)
.+++.+.|.+ +++.+-...|.++++|+.|+|.+| ++.+-..+|.+ .+|+.+.| .|+++..-+..|.+|++|+.+++
T Consensus 203 ~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 203 AGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEE
T ss_pred cccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEe
Confidence 4678888874 477777778999999999999875 66655667777 78999999 45566455777888999999999
Q ss_pred cCCcCC-----CCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCCCCcccccccCCCCccccccc
Q 006739 154 SGNSFS-----GNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIPVMRRVGPSGFQYPKRY 227 (633)
Q Consensus 154 ~~N~l~-----~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~ 227 (633)
.+|.+. ... ..|.+|++|+.++|. |+++..-...|.+|.+|+.++|.+| +..+ +..+|..+ ++
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I--------~~~aF~~~-~L 347 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQI--------NFSAFNNT-GI 347 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEE--------CTTSSSSS-CC
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEE--------cHHhCCCC-CC
Confidence 888876 222 568888899999998 4577555677888888998888655 4333 34556555 55
Q ss_pred cccccccC
Q 006739 228 VLAETTTN 235 (633)
Q Consensus 228 ~~~~~~~~ 235 (633)
.......+
T Consensus 348 ~~l~l~~n 355 (401)
T 4fdw_A 348 KEVKVEGT 355 (401)
T ss_dssp CEEEECCS
T ss_pred CEEEEcCC
Confidence 55444443
No 414
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.37 E-value=1.6e-06 Score=86.61 Aligned_cols=136 Identities=20% Similarity=0.162 Sum_probs=91.2
Q ss_pred ccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCC---cccccceee
Q 006739 342 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHR---NLLPLLAHM 418 (633)
Q Consensus 342 ~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~ 418 (633)
++.++.|....||+. |..+++|+.... .....+.+|.++++.+.+. .+.+.+.++
T Consensus 24 v~~l~~G~~n~v~~v------g~~~VlR~~~~~----------------~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~ 81 (306)
T 3tdw_A 24 VESLGEGFRNYAILV------NGDWVFRFPKSQ----------------QGADELNKEIQLLPLLVGCVKVNIPQYVYIG 81 (306)
T ss_dssp EEEEEECSSEEEEEE------TTTEEEEEESSH----------------HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEE
T ss_pred eeecCCCcceeEEEE------CCEEEEEecCCc----------------hHHHHHHHHHHHHHHHHhcCCCCCCCeEeec
Confidence 456788888899987 346888874210 0135688899999998742 355666666
Q ss_pred e-cCCccEEEEecccCCCHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------------------------
Q 006739 419 A-RPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHIS------------------------- 472 (633)
Q Consensus 419 ~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~------------------------- 472 (633)
. ..+..++||||++|.++.+..- ..++...+..++.++++.|+.||..
T Consensus 82 ~~~~g~~~~v~e~i~G~~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~ 155 (306)
T 3tdw_A 82 KRSDGNPFVGYRKVQGQILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEA 155 (306)
T ss_dssp ECTTSCEEEEEECCCSEECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHH
T ss_pred ccCCCceEEEEeccCCeECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHH
Confidence 4 3455789999999988765321 1133444445555555555555421
Q ss_pred --------------------------------CCCCeeeCCCCCCCeEecC---CCce-EEcccccccc
Q 006739 473 --------------------------------HNPRIIHRDLKPANVLLDD---DMEA-RIADFGLAKA 505 (633)
Q Consensus 473 --------------------------------h~~~ivH~Dikp~Nill~~---~~~~-kl~DfG~a~~ 505 (633)
....++|+|+++.||+++. ++.+ .|+||+.+..
T Consensus 156 ~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 156 VEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 3446799999999999997 4554 8999997754
No 415
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.26 E-value=2.5e-06 Score=87.13 Aligned_cols=144 Identities=12% Similarity=0.149 Sum_probs=88.0
Q ss_pred cccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCc--ccccceee
Q 006739 341 SLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRN--LLPLLAHM 418 (633)
Q Consensus 341 ~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~ 418 (633)
..+.++.|....+|+... ++..+++|..... ..+.+|..+++.+.... +.+++.++
T Consensus 45 ~i~~l~gG~~n~~y~v~~---~g~~~vlK~~~~~-------------------~~~~~E~~~l~~L~~~gvpvP~vl~~~ 102 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV---GGRGYVLRVNSCA-------------------DGFYKDRYVYRHFASAALPIPEVLDIG 102 (362)
T ss_dssp EEEEEEECSSEEEEEEEE---TTEEEEEEEESCC-------------------HHHHHHHHHHHHHCCSSSCCCCEEEEE
T ss_pred eEEECCCCCcceEEEEEE---CCcEEEEEeCCch-------------------hhHHHHHHHHHHHHhcCCCCceEEEec
Confidence 457789999999999975 6889999986321 13566777777776433 55677776
Q ss_pred ecC-CccEEEEecccCCCHHHH------------------HhhhcCCC-C-------C-----CCHHHH-----------
Q 006739 419 ARP-DCHLLVYEFMKNGSLQDI------------------LNDVSQGR-R-------E-----LDWLAR----------- 455 (633)
Q Consensus 419 ~~~-~~~~lv~e~~~~gsL~~~------------------l~~~~~~~-~-------~-----l~~~~~----------- 455 (633)
... +..++||||++|.++.++ ++...... . . -.|...
T Consensus 103 ~~~~g~~~lv~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~ 182 (362)
T 3ovc_A 103 EFSESLTYCISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYH 182 (362)
T ss_dssp ESSSSCEEEEEECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCC
T ss_pred cCCCCCeEEEEEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHH
Confidence 654 567899999998655321 12211000 0 0 011111
Q ss_pred ----------HHHHHHHHHHHHHHHhc-CCCCeeeCCCCCCCeEecCCCceEEccccccccc
Q 006739 456 ----------HKIALGVACGLEYLHIS-HNPRIIHRDLKPANVLLDDDMEARIADFGLAKAM 506 (633)
Q Consensus 456 ----------~~i~~~ia~~L~~Lh~~-h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 506 (633)
......+.+.++++... ....++|+|+++.||++++++.+.|+||+.+..-
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 183 WQTVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHCCTTTHHHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHhhcccccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 01111122222233111 1267899999999999988777889999987653
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.24 E-value=4.1e-07 Score=92.68 Aligned_cols=131 Identities=18% Similarity=0.233 Sum_probs=91.1
Q ss_pred eeeEEEEecCCCCc---------ccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCccccc-
Q 006739 74 LKITKLVFVPRELT---------GVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLS- 143 (633)
Q Consensus 74 ~~~~~L~l~~n~l~---------~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 143 (633)
.+++.|.+.++... +.+...+..+++|+.|+|++|.-.. ++. +. +++|+.|+|..|.++......++
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~-l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS-IGK-KP-RPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB-CCS-CB-CTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce-ecc-cc-CCCCcEEEEecCCCChHHHHHHHH
Confidence 47888888765431 1233456778999999999883112 343 43 89999999999988754444444
Q ss_pred -CCCCCCEEEccC--CcCCCC------CccC--CCCCCCCeEeCcCCcCCccCCcccc---cCCCCCeeccCCCCCCC
Q 006739 144 -SLIRLRVLDLSG--NSFSGN------LGFL--KYFPNLEHLSLAKNLFTGKVPTSIR---TFRNLQFFDFSGNSLLE 207 (633)
Q Consensus 144 -~l~~L~~L~l~~--N~l~~~------~~~~--~~l~~L~~L~l~~N~l~~~~p~~~~---~~~~L~~l~l~~N~l~~ 207 (633)
.+++|+.|+|+. |...+. ...+ ..+|+|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.|..
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 789999999864 332222 1223 3589999999999999854443333 47899999999998854
No 417
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.07 E-value=4.5e-06 Score=85.34 Aligned_cols=84 Identities=2% Similarity=-0.014 Sum_probs=51.7
Q ss_pred cccc-ccccCeeEEEEEec--CC---CCeEEEEEEccCCCc-chhhhhHHHHHHHHHHHHHHHHHHHHhhcCC-C--Ccc
Q 006739 342 LEKI-GSGGCGEVYKAELP--GS---NGKMIAIKKVIQPPK-DAAELTEEDSKLLNKKMRQIRSEINTVGQIR-H--RNL 411 (633)
Q Consensus 342 ~~~i-g~G~~g~Vy~~~~~--~~---~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~ni 411 (633)
.+.| +.|....+|+.... .. ++..+++|+...... .... ...+.+|+.+++.+. + -.+
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~------------~~~~~~E~~~l~~L~~~~~vpv 92 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFP------------TYRLDHQFEVIRLVGELTDVPV 92 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSS------------CCCHHHHHHHHHHHHHHCCSCC
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCc------------hhHHHHHHHHHHHHhhcCCCCC
Confidence 4677 88889999998652 00 167889987532110 0000 123455666666664 2 356
Q ss_pred cccceeeecC---CccEEEEecccCCCHH
Q 006739 412 LPLLAHMARP---DCHLLVYEFMKNGSLQ 437 (633)
Q Consensus 412 v~l~~~~~~~---~~~~lv~e~~~~gsL~ 437 (633)
.+++.++.+. +..++||||++|..+.
T Consensus 93 P~v~~~~~~~~~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 93 PRVRWIETTGDVLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp CCEEEEECSSTTTSSCEEEEECCCCBCCC
T ss_pred CcEEEEccCCCccCCceEEEEecCCCChh
Confidence 7778777654 3568999999886654
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.07 E-value=3.1e-05 Score=78.47 Aligned_cols=32 Identities=22% Similarity=0.469 Sum_probs=28.4
Q ss_pred CCCCeeeCCCCCCCeEecCCCceEEccccccc
Q 006739 473 HNPRIIHRDLKPANVLLDDDMEARIADFGLAK 504 (633)
Q Consensus 473 h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 504 (633)
....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 220 ~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 220 KSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred ccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 36789999999999999888889999999764
No 419
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.83 E-value=5.6e-05 Score=75.07 Aligned_cols=140 Identities=16% Similarity=0.174 Sum_probs=90.8
Q ss_pred cccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCC---CCccccccee
Q 006739 341 SLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIR---HRNLLPLLAH 417 (633)
Q Consensus 341 ~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~ 417 (633)
..+.|+.|....+|+... ++..+++|+..... ...+..|.+.++.+. ...+++++.+
T Consensus 40 ~~~~l~gG~~n~~y~v~~---~~~~~vlK~~~~~~-----------------~~~~~~E~~~L~~L~~~~~v~VP~vl~~ 99 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND---EVQTVFVKINERSY-----------------RSMFRAEADQLALLAKTNSINVPLVYGI 99 (312)
T ss_dssp EEEEECCSSSSEEEEEES---SSCEEEEEEEEGGG-----------------HHHHHHHHHHHHHHHHTTSSBCCCEEEE
T ss_pred eeEEeCCccceeeeEEEE---CCCeEEEEeCCccc-----------------HHHHHHHHHHHHHHHhhCCCCcceEEEE
Confidence 357789999999999974 56788999863210 345677888887774 3568888888
Q ss_pred eecCCccEEEEecccCCCHH-----------HHHhhhcC-C--C---------------CCCCHHHHH---HHHH-----
Q 006739 418 MARPDCHLLVYEFMKNGSLQ-----------DILNDVSQ-G--R---------------RELDWLARH---KIAL----- 460 (633)
Q Consensus 418 ~~~~~~~~lv~e~~~~gsL~-----------~~l~~~~~-~--~---------------~~l~~~~~~---~i~~----- 460 (633)
+...+..++||||+++..+. ..+|.... . + ..-+|.... ++..
T Consensus 100 ~~~~g~~~lvme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a 179 (312)
T 3jr1_A 100 GNSQGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQIC 179 (312)
T ss_dssp EECSSEEEEEEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHH
T ss_pred eecCCceEEEEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 88778899999999987542 12333221 0 0 012454321 1111
Q ss_pred -----------HHHHH-HHHHH-hcCCCCeeeCCCCCCCeEecCCCceEEcccc
Q 006739 461 -----------GVACG-LEYLH-ISHNPRIIHRDLKPANVLLDDDMEARIADFG 501 (633)
Q Consensus 461 -----------~ia~~-L~~Lh-~~h~~~ivH~Dikp~Nill~~~~~~kl~DfG 501 (633)
.+.+- ...|. ......++|+|+.+.|++++.++ +.|+||.
T Consensus 180 ~~~g~~~~~~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 180 KEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTCCCSCHHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHcCCChHHHHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11111 12331 12357899999999999999887 8899974
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.80 E-value=5.5e-06 Score=74.15 Aligned_cols=34 Identities=12% Similarity=0.098 Sum_probs=16.5
Q ss_pred eeEEEEecCCCCcccCCccccCCccccEEEccCC
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLSELRELSLANN 108 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 108 (633)
+++.||++++.++..--..+.++++|+.|+|+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555544332233444455555555554
No 421
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.78 E-value=5.3e-06 Score=74.26 Aligned_cols=83 Identities=12% Similarity=0.127 Sum_probs=56.4
Q ss_pred ccccEEEccCCCCCCCCchhccCCCCCcEEEccCcc-CCCCCcccccCC----CCCCEEEccCCc-CCCCC-ccCCCCCC
Q 006739 98 SELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQ-FSGTIPSDLSSL----IRLRVLDLSGNS-FSGNL-GFLKYFPN 170 (633)
Q Consensus 98 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~-~~~~~l~~ 170 (633)
-.|+.|||+++.|+..--..+.++++|+.|+|+++. |+..--..++.+ ++|+.|+|+++. +|..- ..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468888888888776444556778888888888874 664333334443 368888888864 66433 45566778
Q ss_pred CCeEeCcCCc
Q 006739 171 LEHLSLAKNL 180 (633)
Q Consensus 171 L~~L~l~~N~ 180 (633)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888887765
No 422
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.77 E-value=7.2e-05 Score=77.50 Aligned_cols=82 Identities=13% Similarity=0.160 Sum_probs=47.0
Q ss_pred ccccccccCeeEEEEEecCCCCeEEEEEEccCCCc-chhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC--Cc-cccccee
Q 006739 342 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPK-DAAELTEEDSKLLNKKMRQIRSEINTVGQIRH--RN-LLPLLAH 417 (633)
Q Consensus 342 ~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~n-iv~l~~~ 417 (633)
.+.||.|.++.||++... .+++.++||....... ...... .....+..|.++++.+.. +. +.+++.+
T Consensus 35 ~~~lg~G~~n~vyrv~~~-~~~~~~vvK~~~~~~r~~~~~~~--------~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~ 105 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQ-EHDRALIIKQAVPYAKVVGESWP--------LTIDRARIESSALIRQGEHVPHLVPRVFYS 105 (397)
T ss_dssp EEECCSSSSEEEEEEEC-----CEEEEEEECCC-------CC--------CCTTHHHHHHHHHHHHHTTCGGGSCCEEEE
T ss_pred EEECCCCceEEEEEEEEC-CCCcEEEEEecchhhcccCCCCc--------CcHHHHHHHHHHHHHhhhhCCCCcCeEEEE
Confidence 567999999999999653 2467899997643211 000000 001234567777776632 33 3455543
Q ss_pred eecCCccEEEEecccCC
Q 006739 418 MARPDCHLLVYEFMKNG 434 (633)
Q Consensus 418 ~~~~~~~~lv~e~~~~g 434 (633)
+.+..++||||+++.
T Consensus 106 --d~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 106 --DTEMAVTVMEDLSHL 120 (397)
T ss_dssp --ETTTTEEEECCCTTS
T ss_pred --cCCccEEEEEeCCCc
Confidence 455678999999763
No 423
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.72 E-value=1.1e-05 Score=73.68 Aligned_cols=113 Identities=16% Similarity=0.166 Sum_probs=83.1
Q ss_pred cccCCccccEEEccCC-CCCCC----CchhccCCCCCcEEEccCccCCCC----CcccccCCCCCCEEEccCCcCCCCC-
Q 006739 93 SIGRLSELRELSLANN-SLVDL----LPPQIVDCKKLEILNVQNNQFSGT----IPSDLSSLIRLRVLDLSGNSFSGNL- 162 (633)
Q Consensus 93 ~~~~l~~L~~L~l~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~- 162 (633)
.+.+-+.|+.|+|++| +|... +-+.+..-+.|+.|+|++|+|... +...+..-+.|+.|+|++|.|+..-
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3556678999999985 77531 445667778999999999999832 3344556688999999999998643
Q ss_pred ----ccCCCCCCCCeEeCcCCc---CCc----cCCcccccCCCCCeeccCCCCC
Q 006739 163 ----GFLKYFPNLEHLSLAKNL---FTG----KVPTSIRTFRNLQFFDFSGNSL 205 (633)
Q Consensus 163 ----~~~~~l~~L~~L~l~~N~---l~~----~~p~~~~~~~~L~~l~l~~N~l 205 (633)
..+..-+.|+.|+|++|. +.. .+-+.+..-++|+.|+++.|.+
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 456677789999998763 332 2344566678999999988764
No 424
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.65 E-value=0.00018 Score=70.77 Aligned_cols=79 Identities=15% Similarity=0.202 Sum_probs=53.5
Q ss_pred CcccccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCC---ccccc
Q 006739 338 GLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHR---NLLPL 414 (633)
Q Consensus 338 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l 414 (633)
....++.+|.|..+.||+.+.. ||+.|++|+........ ...|..|.+.|+.+.-. .++++
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~--DG~~~~vK~~~~~~~~~--------------~~~~~~Ea~~L~~L~~~~~vpvP~v 79 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELA--DGTPLFVKALPDDAPAL--------------DGLFRAEALGLDWLGRSFGSPVPQV 79 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEET--TSCEEEEEECCTTCCCC--------------TTHHHHHHHHHHHHTCSTTCCSCCE
T ss_pred CeEEEEecCCCCCeEEEEEEEC--CCCEEEEEEeCCCCcch--------------hhHHHHHHHHHHHHHhhCCCCcceE
Confidence 3455688999999999999875 89999999864332111 12466788888777422 34455
Q ss_pred ceeeecCCccEEEEecccCCCH
Q 006739 415 LAHMARPDCHLLVYEFMKNGSL 436 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL 436 (633)
+++ +..++||||++++..
T Consensus 80 ~~~----~~~~lv~e~l~~~~~ 97 (288)
T 3f7w_A 80 AGW----DDRTLAMEWVDERPP 97 (288)
T ss_dssp EEE----ETTEEEEECCCCCCC
T ss_pred Eec----cCceEEEEeecccCC
Confidence 543 234789999987643
No 425
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.51 E-value=0.00049 Score=71.75 Aligned_cols=81 Identities=19% Similarity=0.062 Sum_probs=49.8
Q ss_pred CCCCeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCC---CCCccchHHHHHHHH
Q 006739 473 HNPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLK---FTDKCDIYSFGVLLA 549 (633)
Q Consensus 473 h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~~l~ 549 (633)
+...++|+|+++.|||++.++ ++++||+.+..-........ ....-...|.+|+...... .....++......+|
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGA-YLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHH-HHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHH-HHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 578899999999999999876 99999998775332111000 0000123466666553211 112345567788888
Q ss_pred HHHhCC
Q 006739 550 VLVMGR 555 (633)
Q Consensus 550 elltg~ 555 (633)
+.+++.
T Consensus 308 ~~y~~~ 313 (420)
T 2pyw_A 308 NLFNKR 313 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777653
No 426
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.44 E-value=0.00025 Score=73.35 Aligned_cols=117 Identities=12% Similarity=0.238 Sum_probs=88.3
Q ss_pred CCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCC-c
Q 006739 85 ELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-G 163 (633)
Q Consensus 85 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~ 163 (633)
.++.+-..+|.+++.|+.+.+.++.. .+-...|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++... .
T Consensus 252 ~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~ 328 (394)
T 4gt6_A 252 GVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDD 328 (394)
T ss_dssp TEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTT
T ss_pred cceEcccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHh
Confidence 44444456788899999999976643 3456788889999999996 5566455567889999999999865 55444 6
Q ss_pred cCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCC
Q 006739 164 FLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSL 205 (633)
Q Consensus 164 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l 205 (633)
.|.+|.+|+.+.|..+ ++..-...|.+|.+|+.+++.+|..
T Consensus 329 aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 329 AFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred HhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 7888999999999655 6644456789999999999988754
No 427
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.42 E-value=0.00024 Score=60.44 Aligned_cols=56 Identities=14% Similarity=0.115 Sum_probs=32.7
Q ss_pred EEEccCCcCC--CCCccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCCCCCC
Q 006739 150 VLDLSGNSFS--GNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLE 207 (633)
Q Consensus 150 ~L~l~~N~l~--~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N~l~~ 207 (633)
.++.+++.|+ .+|..+ .++|+.|+|++|+|+...+..|..+++|+.|+|++|++.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 5555555555 444322 1356666666666664444556666667777777776643
No 428
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.38 E-value=0.00051 Score=70.49 Aligned_cols=105 Identities=11% Similarity=0.138 Sum_probs=44.6
Q ss_pred cccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCC
Q 006739 93 SIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNL 171 (633)
Q Consensus 93 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L 171 (633)
.+.++..|+.+.+..+ ++.+-...|.++.+|+.+.+..+ ++..-...|.++++|+.+.+.+|.++... ..|.+|.+|
T Consensus 235 ~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L 312 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKL 312 (379)
T ss_dssp TTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTC
T ss_pred cccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCC
Confidence 3444444444444433 33323334444444444444332 33122233444455555555444444333 344444555
Q ss_pred CeEeCcCCcCCccCCcccccCCCCCeecc
Q 006739 172 EHLSLAKNLFTGKVPTSIRTFRNLQFFDF 200 (633)
Q Consensus 172 ~~L~l~~N~l~~~~p~~~~~~~~L~~l~l 200 (633)
+.+.|..+ ++..-...|.+|.+|+.+.+
T Consensus 313 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 313 SSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred CEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 55555432 33222234444444544444
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.36 E-value=0.00029 Score=60.01 Aligned_cols=55 Identities=22% Similarity=0.281 Sum_probs=29.9
Q ss_pred EEEccCCCCC-CCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcC
Q 006739 102 ELSLANNSLV-DLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSF 158 (633)
Q Consensus 102 ~L~l~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 158 (633)
.++.++++++ ..+|..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5566666665 12453322 3566666666666633334455566666666666654
No 430
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.32 E-value=0.00063 Score=70.23 Aligned_cols=85 Identities=9% Similarity=0.134 Sum_probs=46.4
Q ss_pred chhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCC
Q 006739 115 PPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFR 193 (633)
Q Consensus 115 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 193 (633)
..+|.++.+|+.+.+..+..+ .-...|.++++|+.+.+. +.++... ..|.++.+|+.++|..| ++..-...|.+|.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 345566666666666554433 444455666666666664 3343333 45566666666666543 4423344566666
Q ss_pred CCCeeccCC
Q 006739 194 NLQFFDFSG 202 (633)
Q Consensus 194 ~L~~l~l~~ 202 (633)
+|+.+.+..
T Consensus 335 ~L~~i~ip~ 343 (394)
T 4gt6_A 335 QLERIAIPS 343 (394)
T ss_dssp TCCEEEECT
T ss_pred CCCEEEECc
Confidence 666666643
No 431
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.23 E-value=0.00069 Score=67.07 Aligned_cols=32 Identities=22% Similarity=0.139 Sum_probs=26.4
Q ss_pred CCCCeeeCCCCCCCeEecCCCceEEcccccccc
Q 006739 473 HNPRIIHRDLKPANVLLDDDMEARIADFGLAKA 505 (633)
Q Consensus 473 h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 505 (633)
....++|+|+.+.||+ ..++.+.++||..+..
T Consensus 171 ~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 171 LPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 3456899999999999 5666889999998764
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.21 E-value=4.2e-05 Score=69.74 Aligned_cols=108 Identities=13% Similarity=0.131 Sum_probs=79.9
Q ss_pred eeEEEEecCC-CCccc----CCccccCCccccEEEccCCCCCCC----CchhccCCCCCcEEEccCccCCCC----Cccc
Q 006739 75 KITKLVFVPR-ELTGV----LSPSIGRLSELRELSLANNSLVDL----LPPQIVDCKKLEILNVQNNQFSGT----IPSD 141 (633)
Q Consensus 75 ~~~~L~l~~n-~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 141 (633)
.++.|+|++| +|... +...+..-+.|+.|+|++|+|... +.+.+..-+.|+.|+|++|.|+.. +-..
T Consensus 42 ~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~a 121 (197)
T 1pgv_A 42 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRS 121 (197)
T ss_dssp SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHH
T ss_pred CccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHH
Confidence 7899999986 76532 344566778899999999999752 445555668999999999999843 2344
Q ss_pred ccCCCCCCEEEccCCcC---CCCC-----ccCCCCCCCCeEeCcCCcCC
Q 006739 142 LSSLIRLRVLDLSGNSF---SGNL-----GFLKYFPNLEHLSLAKNLFT 182 (633)
Q Consensus 142 ~~~l~~L~~L~l~~N~l---~~~~-----~~~~~l~~L~~L~l~~N~l~ 182 (633)
+..-+.|+.|+|++|.. .... ..+..-+.|+.|+++.|.+.
T Consensus 122 L~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 122 TLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp TTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 55667899999997643 3211 34566689999999988764
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.20 E-value=0.00085 Score=67.46 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=28.8
Q ss_pred CCCCeeeCCCCCCCeEecCC----CceEEccccccccc
Q 006739 473 HNPRIIHRDLKPANVLLDDD----MEARIADFGLAKAM 506 (633)
Q Consensus 473 h~~~ivH~Dikp~Nill~~~----~~~kl~DfG~a~~~ 506 (633)
+...++|+|+.+.||+++.+ +.+.|+||+.+..-
T Consensus 181 ~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 181 GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp SCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 45689999999999999874 67899999987653
No 434
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.18 E-value=0.00085 Score=69.26 Aligned_cols=122 Identities=13% Similarity=0.106 Sum_probs=69.7
Q ss_pred eeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEcc
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLS 154 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (633)
.++.+.+.. .++.+-...+.++..|+.+.+..+.. .+....|..+..|+.+.+..+.+. ...|..+.+|+.+.+.
T Consensus 231 ~l~~i~ip~-~~~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPD-SFTELGKSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECT-TCCEECSSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEEC
T ss_pred CCceEEECC-CceecccccccccccceeEEcCCCcc-eeeccccccccccceeccCceeec---cccccccccccccccc
Confidence 455666543 33444445677777788877776643 234456666666666666555432 2345566666666665
Q ss_pred CCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCC
Q 006739 155 GNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGN 203 (633)
Q Consensus 155 ~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N 203 (633)
+| ++... ..|.++.+|+.++|.++ ++..-...|.+|.+|+.+++..|
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred cc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 44 33332 45666666666666533 44333455666666666666554
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.12 E-value=0.0028 Score=63.39 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=26.2
Q ss_pred CCCCeeeCCCCCCCeEecCCCceEEcccccccc
Q 006739 473 HNPRIIHRDLKPANVLLDDDMEARIADFGLAKA 505 (633)
Q Consensus 473 h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 505 (633)
....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 193 ~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 193 FTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 356789999999999999 4 899999987654
No 436
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.09 E-value=0.0012 Score=67.80 Aligned_cols=114 Identities=13% Similarity=0.127 Sum_probs=87.6
Q ss_pred eeEEEEecCCCCcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEcc
Q 006739 75 KITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLS 154 (633)
Q Consensus 75 ~~~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (633)
.++.+.+..+ ++.+-...|.++.+|+.+.+..+ ++.+-...|.++++|+.+++.+|.++..-...|.++.+|+.+.|.
T Consensus 241 ~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 241 ALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp SCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECC
T ss_pred cceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcC
Confidence 5667777654 66655678899999999999765 655556789999999999999999985556789999999999997
Q ss_pred CCcCCCCC-ccCCCCCCCCeEeCcCCcCCccCCcccccC
Q 006739 155 GNSFSGNL-GFLKYFPNLEHLSLAKNLFTGKVPTSIRTF 192 (633)
Q Consensus 155 ~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 192 (633)
.| ++... ..|.+|.+|+.+.+..| ++..-...|.++
T Consensus 319 ~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 319 TA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp TT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred cc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 65 65554 67899999999998655 553334455444
No 437
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.08 E-value=0.001 Score=68.70 Aligned_cols=115 Identities=17% Similarity=0.177 Sum_probs=71.4
Q ss_pred CcccCCccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEccCCc-------C
Q 006739 86 LTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNS-------F 158 (633)
Q Consensus 86 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-------l 158 (633)
++.+-..+|.++++|+.+.|.++ ++.+-..+|.++++|+.++|.+| ++..-...|.++.+|+.+.+..+- +
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF 136 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAF 136 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceee
Confidence 34444456777777777777643 55545566777777777777644 442334456666666665554331 0
Q ss_pred CC--------------C-CccCCCCCCCCeEeCcCCcCCccCCcccccCCCCCeeccCCC
Q 006739 159 SG--------------N-LGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGN 203 (633)
Q Consensus 159 ~~--------------~-~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~l~l~~N 203 (633)
.+ . ...|.++++|+.+.+.++..+ .-...|..+.+|+.+++..|
T Consensus 137 ~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~ 195 (394)
T 4fs7_A 137 KGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN 195 (394)
T ss_dssp TTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT
T ss_pred ecccccccccCccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC
Confidence 00 0 145777888888888766433 44566788888888888766
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.06 E-value=0.00082 Score=70.09 Aligned_cols=74 Identities=12% Similarity=0.208 Sum_probs=46.4
Q ss_pred ccccccccCeeEEEEEecCC------CCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc-ccc
Q 006739 342 LEKIGSGGCGEVYKAELPGS------NGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNL-LPL 414 (633)
Q Consensus 342 ~~~ig~G~~g~Vy~~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l 414 (633)
++.|+.|....+|++..... ++..+++|+...... ...+.+|..+++.+...++ +++
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~----------------~~~li~E~~~l~~L~~~g~~P~l 141 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET----------------ESHLVAESVIFTLLSERHLGPKL 141 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC----------------HHHHHHHHHHHHHHHHTTSSSCE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc----------------HHHHHHHHHHHHHHHhCCCCCcE
Confidence 46788898999999986421 257899998743211 0123356677666643333 566
Q ss_pred ceeeecCCccEEEEecccCCC
Q 006739 415 LAHMARPDCHLLVYEFMKNGS 435 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gs 435 (633)
++.+.+ .+||||++|.+
T Consensus 142 ~~~~~~----g~v~e~l~G~~ 158 (429)
T 1nw1_A 142 YGIFSG----GRLEEYIPSRP 158 (429)
T ss_dssp EEEETT----EEEECCCCEEE
T ss_pred EEEeCC----CEEEEEeCCcc
Confidence 665542 38999998643
No 439
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.01 E-value=0.00076 Score=67.43 Aligned_cols=144 Identities=14% Similarity=0.148 Sum_probs=75.9
Q ss_pred ccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCc--cccccee--
Q 006739 342 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRN--LLPLLAH-- 417 (633)
Q Consensus 342 ~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~-- 417 (633)
.+.|+.|....+|++... + ..+++|....... ..++..|+.++..+...+ +.+++..
T Consensus 27 ~~~i~~G~~n~~~~v~~~--~-g~~vlk~~~~~~~----------------~~~l~~e~~~l~~L~~~g~~vP~~~~~~~ 87 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTT--K-DPLILTLYEKRVE----------------KNDLPFFLGLMQHLAAKGLSCPLPLPRKD 87 (322)
T ss_dssp EEEECC---EEEEEEEES--S-CCEEEEEECC-------------------CCHHHHHHHHHHHHHHTTCCCCCBCCBTT
T ss_pred eeccCCCcccceEEEEeC--C-ccEEEEEeCCCCC----------------HHHHHHHHHHHHHHHHCCCCCCcccCCCC
Confidence 466788888999999753 3 3688998754210 112334555555443111 2333321
Q ss_pred ----eecCCccEEEEecccCCCHHH--------------HHhhhcCC-CCC-------CCHHHHHH------------HH
Q 006739 418 ----MARPDCHLLVYEFMKNGSLQD--------------ILNDVSQG-RRE-------LDWLARHK------------IA 459 (633)
Q Consensus 418 ----~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~-~~~-------l~~~~~~~------------i~ 459 (633)
....+..+++|+|++|..+.. .+|..... ... ..|..... +.
T Consensus 88 g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~ 167 (322)
T 2ppq_A 88 GELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLR 167 (322)
T ss_dssp CCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHH
T ss_pred CCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhH
Confidence 122355689999998864310 12221110 000 11322110 00
Q ss_pred HHHHHHHHHHHhc----CCCCeeeCCCCCCCeEecCCCceEEccccccc
Q 006739 460 LGVACGLEYLHIS----HNPRIIHRDLKPANVLLDDDMEARIADFGLAK 504 (633)
Q Consensus 460 ~~ia~~L~~Lh~~----h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 504 (633)
..+.+.++++... ...+++|+|+.+.||+++++..+.|+||+.+.
T Consensus 168 ~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 168 EEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp HHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 1134445555421 24679999999999999987656899998654
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.87 E-value=0.003 Score=64.40 Aligned_cols=144 Identities=11% Similarity=0.153 Sum_probs=80.3
Q ss_pred ccccccccCeeEEEEEecC------CCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCc-cccc
Q 006739 342 LEKIGSGGCGEVYKAELPG------SNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRN-LLPL 414 (633)
Q Consensus 342 ~~~ig~G~~g~Vy~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l 414 (633)
++.|..|-...+|++.... .+++.+++|+....... ...+.+|.++++.+.-.+ ..++
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~---------------~~~~~rE~~vl~~L~~~gv~P~l 119 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQG---------------VDSLVLESVMFAILAERSLGPQL 119 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CC---------------HHHHHHHHHHHHHHHHTTSSCCE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccch---------------HHHHHHHHHHHHHHHhcCCCCeE
Confidence 4667778889999997631 13478999985221100 234457778877774222 3566
Q ss_pred ceeeecCCccEEEEecccCCCHHH--------------H---HhhhcC-CCCCCC--HHHHHHHHHHHHH----------
Q 006739 415 LAHMARPDCHLLVYEFMKNGSLQD--------------I---LNDVSQ-GRRELD--WLARHKIALGVAC---------- 464 (633)
Q Consensus 415 ~~~~~~~~~~~lv~e~~~~gsL~~--------------~---l~~~~~-~~~~l~--~~~~~~i~~~ia~---------- 464 (633)
++++.+ .+||||++|.+|.. . +|.... ...... |.+..++..++..
T Consensus 120 l~~~~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~ 195 (379)
T 3feg_A 120 YGVFPE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMN 195 (379)
T ss_dssp EEEETT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCC
T ss_pred EEEcCC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhh
Confidence 666543 38999998865421 1 122111 112222 3444444433321
Q ss_pred ---------HHHHHH----h-cCCCCeeeCCCCCCCeEecCC----CceEEccccccc
Q 006739 465 ---------GLEYLH----I-SHNPRIIHRDLKPANVLLDDD----MEARIADFGLAK 504 (633)
Q Consensus 465 ---------~L~~Lh----~-~h~~~ivH~Dikp~Nill~~~----~~~kl~DfG~a~ 504 (633)
.+..|. . .....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 196 ~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 196 LLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 122332 1 234578999999999999876 789999998764
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.51 E-value=0.0034 Score=64.04 Aligned_cols=30 Identities=23% Similarity=0.406 Sum_probs=25.0
Q ss_pred CCCeeeCCCCCCCeEecCCCceEEccccccc
Q 006739 474 NPRIIHRDLKPANVLLDDDMEARIADFGLAK 504 (633)
Q Consensus 474 ~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 504 (633)
...++|+|+++.||+++++. +.|+||..+.
T Consensus 211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp CEEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred CeEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 45789999999999998664 8999998765
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.45 E-value=0.0059 Score=63.91 Aligned_cols=75 Identities=15% Similarity=0.127 Sum_probs=45.9
Q ss_pred ccccccccCeeEEEEEecCCCCeEEEEEEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc-cccceeeec
Q 006739 342 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNL-LPLLAHMAR 420 (633)
Q Consensus 342 ~~~ig~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~ 420 (633)
++.|+.|-...+|++.... .+..+++|+...... ... ...+|..+++.+...++ .++++.+.
T Consensus 113 i~~lsgG~tN~~y~v~~~~-~~~~~vLRi~g~~~~---~~i------------dR~~E~~vl~~L~~~gl~P~ll~~~~- 175 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMS-KQAKYLIRLYGPKTD---EII------------NREREKKISCILYNKNIAKKIYVFFT- 175 (458)
T ss_dssp EEEECC--CEEEEEEEETT-TTEEEEEEEECC-CC---SCS------------CHHHHHHHHHHHTTSSSBCCEEEEET-
T ss_pred EEEcCCCeEeEEEEEEECC-CCceEEEEECCCChh---hhc------------CHHHHHHHHHHHHhcCCCCCEEEEeC-
Confidence 4678889999999998641 247888998643211 000 12467777777764444 56666653
Q ss_pred CCccEEEEecccCCCH
Q 006739 421 PDCHLLVYEFMKNGSL 436 (633)
Q Consensus 421 ~~~~~lv~e~~~~gsL 436 (633)
+ .+||||++|.+|
T Consensus 176 -~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 176 -N--GRIEEFMDGYAL 188 (458)
T ss_dssp -T--EEEEECCCSEEC
T ss_pred -C--eEEEEeeCCccC
Confidence 2 369999987543
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.28 E-value=0.014 Score=58.54 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=28.2
Q ss_pred CCCeeeCCCCCCCeEecCCCceEEcccccccc
Q 006739 474 NPRIIHRDLKPANVLLDDDMEARIADFGLAKA 505 (633)
Q Consensus 474 ~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 505 (633)
...++|+|+.+.||++++++.+.++||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 45789999999999999888899999987664
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.22 E-value=0.018 Score=52.71 Aligned_cols=104 Identities=16% Similarity=0.105 Sum_probs=68.2
Q ss_pred CHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCeEecCCCceEEcccccccccCCCCCcce
Q 006739 435 SLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHIT 514 (633)
Q Consensus 435 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 514 (633)
||.++|... +.++++.++|.++.|.+++|.-+-. +..-..+=+.|..|++..+|.+.+.+ +.+.
T Consensus 34 SL~eIL~~~---~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 34 SLEEILRLY---NQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred cHHHHHHHc---CCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc----------
Confidence 899999864 5689999999999999998877621 11111333456889999999988774 2110
Q ss_pred ecccccCcccccccccccCCCCCccchHHHHHHHHHHHhCCCCCc
Q 006739 515 TSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSD 559 (633)
Q Consensus 515 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~ 559 (633)
.....+.|||... ...+.+.=|||+|+++|..+--..|-+
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~ 137 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN 137 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc
Confidence 1122466888764 345678899999999999997666533
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.58 E-value=0.019 Score=58.66 Aligned_cols=158 Identities=15% Similarity=0.159 Sum_probs=82.1
Q ss_pred ccccccccCeeEEEEEecC------CCCeEEEEEEccCCCcchhhhhHHHHHHHHH-----HHHHHHHHHHHhhcCC-CC
Q 006739 342 LEKIGSGGCGEVYKAELPG------SNGKMIAIKKVIQPPKDAAELTEEDSKLLNK-----KMRQIRSEINTVGQIR-HR 409 (633)
Q Consensus 342 ~~~ig~G~~g~Vy~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~e~~~l~~l~-h~ 409 (633)
++.|..|-...+|++..+. ..+..|.+++.-.... ............++ .......|..+++.+. +-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te-~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~G 135 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQ-MRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERS 135 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC------------------------CHHHHHHHHHHHHHHHTT
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcc-cccccccccchhhhhhhhccchhhHHHHHHHHHHHhcC
Confidence 4566668888999987642 1236788887643211 00000000000000 0122345788877775 33
Q ss_pred cccccceeeecCCccEEEEecccCCCHH--H------------H---Hhhhc-CCCCCCC--HHHHHHHHHHHH------
Q 006739 410 NLLPLLAHMARPDCHLLVYEFMKNGSLQ--D------------I---LNDVS-QGRRELD--WLARHKIALGVA------ 463 (633)
Q Consensus 410 niv~l~~~~~~~~~~~lv~e~~~~gsL~--~------------~---l~~~~-~~~~~l~--~~~~~~i~~~ia------ 463 (633)
-..++++++.. .+|+||++|-+|. + . +|... ....... |....++..++.
T Consensus 136 i~Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~ 211 (401)
T 3f2s_A 136 LGPKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTE 211 (401)
T ss_dssp SSCCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCS
T ss_pred CCCeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcc
Confidence 35567776643 2899999875442 1 1 11111 0112222 223333332221
Q ss_pred ----------------HHHH----HHHh-cCCCCeeeCCCCCCCeEecCC------CceEEccccccc
Q 006739 464 ----------------CGLE----YLHI-SHNPRIIHRDLKPANVLLDDD------MEARIADFGLAK 504 (633)
Q Consensus 464 ----------------~~L~----~Lh~-~h~~~ivH~Dikp~Nill~~~------~~~kl~DfG~a~ 504 (633)
+-+. +|.. .....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 212 ~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 212 ESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 2211 244578999999999999876 789999998764
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.83 E-value=0.069 Score=55.05 Aligned_cols=31 Identities=23% Similarity=0.400 Sum_probs=26.6
Q ss_pred CCCeeeCCCCCCCeEecCCCceEEcccccccc
Q 006739 474 NPRIIHRDLKPANVLLDDDMEARIADFGLAKA 505 (633)
Q Consensus 474 ~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 505 (633)
...++|+|+.+.||+ +.++.+.++||..+..
T Consensus 261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp CEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 356899999999999 7788999999987753
No 447
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=86.20 E-value=1.1 Score=40.86 Aligned_cols=118 Identities=10% Similarity=0.123 Sum_probs=77.8
Q ss_pred CCCcccccceeeecCCccEEEEecccCC-CHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCC
Q 006739 407 RHRNLLPLLAHMARPDCHLLVYEFMKNG-SLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPA 485 (633)
Q Consensus 407 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~ 485 (633)
.||+.+.. ..-.+.+.+.+.|+.-+.+ ++.. + +..+...+++++..|+....++ ..-+|--+.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-------k~~~~~eKlr~l~ni~~l~~~~-----~~r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-------KSFTKNEKLRYLLNIKNLEEVN-----RTRYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-------GGSCHHHHHHHHHHGGGGGGGG-----GSSEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-------HhcCHHHHHHHHHHHHHHHHHh-----cCceEEEEecc
Confidence 57777755 3445556655666554322 3322 2 2378889999999998866444 33467889999
Q ss_pred CeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchH-HHHHHHHHHHhCCCCCccccc
Q 006739 486 NVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIY-SFGVLLAVLVMGRLPSDDFFQ 563 (633)
Q Consensus 486 Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~-s~G~~l~elltg~~p~~~~~~ 563 (633)
|++++.++.+++.=.|+-..+.+ . ..+ ..|.| .+=+++..+++++..|++...
T Consensus 109 NL~f~~~~~p~i~~RGik~~l~P-------------------~-----~~~-ee~fL~qyKAliiall~~K~~Fe~l~~ 162 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVVDP-------------------L-----PVS-EAEFLTRYKALVICAFNEKQSFDALVE 162 (215)
T ss_dssp GEEECTTSCEEESCCEETTTBSC-------------------C-----CCC-HHHHHHHHHHHHHHHHCTTCCHHHHHH
T ss_pred eEEEcCCCCEEEEEccCccCCCC-------------------C-----CCC-HHHHHHHHHHHHHHHHcCCCCHHHHHc
Confidence 99999999999998776433222 1 111 12333 577889999999999876543
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=80.39 E-value=8.4 Score=35.17 Aligned_cols=116 Identities=13% Similarity=0.212 Sum_probs=76.6
Q ss_pred CCCcccccceeeecCCccEEEEecccCC-CHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCC
Q 006739 407 RHRNLLPLLAHMARPDCHLLVYEFMKNG-SLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPA 485 (633)
Q Consensus 407 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~Dikp~ 485 (633)
.||+. -...-.+.+.+.+.|+.-+++ ++. -++ .++...+++++..|+.... .|...-+|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~-------~~~~~eKlrll~nl~~L~~----~~~~~r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIR-------KTTLLSRIRAAIHLVSKVK----HHSARRLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHH-------TSCHHHHHHHHHHHHHHHS----SCCSSSEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHH-------hcCHHHHHHHHHHHHHHHH----HhhhCceeEEEeCc
Confidence 57776 333335666766777665443 333 332 3788899999999877443 24455678889999
Q ss_pred CeEecCCCceEEcccccccccCCCCCcceecccccCcccccccccccCCCCCccchH-HHHHHHHHHHhCCCCCccc
Q 006739 486 NVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIY-SFGVLLAVLVMGRLPSDDF 561 (633)
Q Consensus 486 Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~-s~G~~l~elltg~~p~~~~ 561 (633)
|+++|.++.+++.-.|+-..+ +|.- .+ ..|.| .+=+++..++.++..|++.
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l-------------------pP~e-----~~-ee~fl~qyKali~all~~K~~Fe~l 165 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL-------------------PPDE-----WD-DERLLREVKATVLALTEGEYRFDEY 165 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB-------------------SSCS-----CC-HHHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred eEEEeCCCcEEEEEcCCcccC-------------------CCCC-----CC-HHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 999999999999987764332 2221 11 12333 4778888999999888653
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=79.31 E-value=0.29 Score=51.15 Aligned_cols=63 Identities=6% Similarity=-0.003 Sum_probs=17.5
Q ss_pred ccccccccccCeeEEEEEecCCCCeEEEE------EEccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 006739 340 ASLEKIGSGGCGEVYKAELPGSNGKMIAI------KKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLP 413 (633)
Q Consensus 340 ~~~~~ig~G~~g~Vy~~~~~~~~~~~vav------K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 413 (633)
...+.|| ||.||+|.+.+ ...+||| |..+... ...+....+.+|..+++..+|||+++
T Consensus 145 ~l~~~lG---fG~v~~g~~~~-~~~~Vav~~~~~~K~~~~~~------------~~~e~~~~~~rea~l~~~~~H~niv~ 208 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYK-KHMPVLKETHDERDSTGQDG------------VSEKRLTSLVRRATLKENEQIPKYEK 208 (463)
T ss_dssp CSTTTSS---BCCC----------CCBGGGC-----------------------------------------------CB
T ss_pred cccccCC---chhhhcccccc-cCCchhhhhccCcccccccc------------ccccccccccccccccccccccccCC
Confidence 3456676 99999999853 2357888 5543211 11222456788999999999999999
Q ss_pred cceee
Q 006739 414 LLAHM 418 (633)
Q Consensus 414 l~~~~ 418 (633)
.+++.
T Consensus 209 ~h~f~ 213 (463)
T 3cxl_A 209 IHNFK 213 (463)
T ss_dssp CCCEE
T ss_pred CcceE
Confidence 98875
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=67.34 E-value=2.5 Score=43.02 Aligned_cols=30 Identities=23% Similarity=0.409 Sum_probs=24.7
Q ss_pred CeeeCCCCCCCeEe------cCCCceEEcccccccc
Q 006739 476 RIIHRDLKPANVLL------DDDMEARIADFGLAKA 505 (633)
Q Consensus 476 ~ivH~Dikp~Nill------~~~~~~kl~DfG~a~~ 505 (633)
.++|+|+.+.||++ +++..+.++||-+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 45799999999999 4566799999987753
No 451
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=64.97 E-value=3.1 Score=26.07 Aligned_cols=16 Identities=25% Similarity=0.430 Sum_probs=7.3
Q ss_pred eeehhhhHHHHHHHHH
Q 006739 282 GFIAGAVAGTISGFVF 297 (633)
Q Consensus 282 ~~i~g~~~~~~~~~~~ 297 (633)
+.++|++.+.++++.+
T Consensus 11 GaIAGiVvG~v~gv~l 26 (38)
T 2k1k_A 11 GEIVAVIFGLLLGAAL 26 (38)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred CceeeeehHHHHHHHH
Confidence 4445555544444333
No 452
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=59.22 E-value=1.7e+02 Score=31.20 Aligned_cols=85 Identities=16% Similarity=0.183 Sum_probs=50.9
Q ss_pred cccceeeecCCccEEEEecccCCCHHHHH----------hhhcCCCC---CCCHHHHHHHHHHHHH--HHHHHHhcCCCC
Q 006739 412 LPLLAHMARPDCHLLVYEFMKNGSLQDIL----------NDVSQGRR---ELDWLARHKIALGVAC--GLEYLHISHNPR 476 (633)
Q Consensus 412 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l----------~~~~~~~~---~l~~~~~~~i~~~ia~--~L~~Lh~~h~~~ 476 (633)
++.+.+........+ .|++++.++.+.+ .+...... ...+..+..++...|- .+.|+ .|
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YI-----LG 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYI-----LG 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHH-----HT
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhhee-----ee
Confidence 344555555444444 4777765555444 33221111 1235566666665442 35566 12
Q ss_pred eeeCCCCCCCeEecCCCceEEccccccc
Q 006739 477 IIHRDLKPANVLLDDDMEARIADFGLAK 504 (633)
Q Consensus 477 ivH~Dikp~Nill~~~~~~kl~DfG~a~ 504 (633)
-+|=.++|||++.+|++.=+|||...
T Consensus 476 --igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 --VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 36778999999999999999999864
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=54.02 E-value=30 Score=27.00 Aligned_cols=39 Identities=21% Similarity=0.270 Sum_probs=18.4
Q ss_pred CccccCCccccEEEccCCCCCCCCchhccCCCCCcEEEcc
Q 006739 91 SPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQ 130 (633)
Q Consensus 91 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 130 (633)
...|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+.
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 344555555555555443 333333445555555555443
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=53.57 E-value=17 Score=28.44 Aligned_cols=44 Identities=18% Similarity=0.115 Sum_probs=19.6
Q ss_pred CCCCCchhccCCCCCcEEEccCccCCCCCcccccCCCCCCEEEcc
Q 006739 110 LVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLS 154 (633)
Q Consensus 110 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (633)
++.+-..+|.++++|+.+.|..+ ++..-...|.+|.+|+.+.+.
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 33333445555555555555433 221333344444444444443
No 455
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=46.08 E-value=3.2e+02 Score=29.58 Aligned_cols=84 Identities=17% Similarity=0.194 Sum_probs=48.9
Q ss_pred ccceeeecCCccEEEEecccCCCHHHHHhhh----------cCCC-CCC--CHHHHHHHHHHHH--HHHHHHHhcCCCCe
Q 006739 413 PLLAHMARPDCHLLVYEFMKNGSLQDILNDV----------SQGR-REL--DWLARHKIALGVA--CGLEYLHISHNPRI 477 (633)
Q Consensus 413 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~----------~~~~-~~l--~~~~~~~i~~~ia--~~L~~Lh~~h~~~i 477 (633)
+.+.+........+ .|++++.++.+++... .... ..+ ....+..++..+| ..+.|+ +
T Consensus 477 ~~Y~Vipls~~~GL-IE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YI-------L 548 (696)
T 2x6h_A 477 TPYKVLATSSKHGF-LQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYL-------L 548 (696)
T ss_dssp CCCCEEESSTTCEE-EECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHH-------H
T ss_pred eccEEEeccCCCCe-eeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHH-------c
Confidence 34444444444443 3666665666555432 1111 111 2244555555544 234555 2
Q ss_pred eeCCCCCCCeEecCCCceEEccccccc
Q 006739 478 IHRDLKPANVLLDDDMEARIADFGLAK 504 (633)
Q Consensus 478 vH~Dikp~Nill~~~~~~kl~DfG~a~ 504 (633)
=-+|=.++|||++.+|++.=+|||...
T Consensus 549 GlGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 549 GVGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp TCCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred cCCCCCCcceEEeCCCCEEEEeehhhh
Confidence 237889999999999999999999864
No 456
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=35.66 E-value=57 Score=21.08 Aligned_cols=10 Identities=20% Similarity=0.318 Sum_probs=4.1
Q ss_pred ehhhhHHHHH
Q 006739 284 IAGAVAGTIS 293 (633)
Q Consensus 284 i~g~~~~~~~ 293 (633)
++|+++|++.
T Consensus 14 A~gVVgGv~~ 23 (44)
T 2ks1_B 14 ATGMVGALLL 23 (44)
T ss_dssp THHHHHHHHH
T ss_pred EeehhHHHHH
Confidence 3444444333
No 457
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=27.78 E-value=66 Score=20.77 Aligned_cols=9 Identities=33% Similarity=0.674 Sum_probs=3.3
Q ss_pred ehhhhHHHH
Q 006739 284 IAGAVAGTI 292 (633)
Q Consensus 284 i~g~~~~~~ 292 (633)
++|+++|++
T Consensus 13 A~gVVgGv~ 21 (44)
T 2l2t_A 13 AAGVIGGLF 21 (44)
T ss_dssp HHHHHHHHH
T ss_pred EEeehHHHH
Confidence 333333333
Done!