Citrus Sinensis ID: 006739

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630---
MALSPAKLNLSLFALLSLLFLSHARLNLDRSDYKALSVILRDLGGQQLFIPSDPCSTPGVFCERRLSDNNTYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIPVMRRVGPSGFQYPKRYVLAETTTNGRSNGPSPAAAPNSSTRSSGAEAPAPSPHHHKHKKSKGKKAAGWILGFIAGAVAGTISGFVFSVLFKLILAAVRGGGRDSGPAIFSPLIKKAEDLAFLEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIRH
cccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEECcccccCCcccccccccccccEEEcccccccccccccccccccccEEEcccccccccccHHHcccccccEEEccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHcccccccEEEccccccEEEEEECcccccEEEEEECcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccCEECcccccEEEEcccccccHHHHHcccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccHHHcccccccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHccccccEEEccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHc
***S**KLNLSLFALLSLLFLSHARLNLDRSDYKALSVILRDLGGQQLFIPSDPCSTPGVFCERRLSDNNTYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIPVMRRVGPSGFQYPKRYVLAETTTNGRSNGPSPA*******************************AAGWILGFIAGAVAGTISGFVFSVLFKLILAAVR***RDSGPAIFSPLIKKAEDLAFLEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAA***********KKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIRH
xxxxxxxxxHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MALSPAKLNLSLFALLSLLFLSHARLNLDRSDYKALSVILRDLGGQQLFIPSDPCSTPGVFCERRLSDNNTYVLKITKLVFVPRELTGVLSPSIGRLSELRELSLANNSLVDLLPPQIVDCKKLEILNVQNNQFSGTIPSDLSSLIRLRVLDLSGNSFSGNLGFLKYFPNLEHLSLAKNLFTGKVPTSIRTFRNLQFFDFSGNSLLEGPIPVMRRVGPSGFQYPKRYVLAETTTNGRSNGPSPAAAPNSSTRSSGAEAPAPSPHHHKHKKSKGKKAAGWILGFIAGAVAGTISGFVFSVLFKLILAAVRGGGRDSGPAIFSPLIKKAEDLAFLEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAxxxxxxxxxxxxxxxxxxxxxINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVLLAVLVMGRLPSDDFFQHTEEMSLVKWMRNVMTSENPTRAIDAKLLENGYEEQMLLVLKIACFCTVDSPRERPNSKDVRCMLSQIRH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 Dual specificity kinase acting on both serine/threonine-and tyrosine-containing substrates. Promotes the activation of plant defense and cell death. Functions as an inhibitor/regulator of abscission, probably by regulating membrane trafficking during abscission.probableQ9SKB2

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.11.-Protein-serine/threonine kinases.probable
2.7.11.1Transferred entry: 2.7.11.19.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ZIW, chain A
Confidence level:very confident
Coverage over the Query: 55-211
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Template: 1ZIW, chain A
Confidence level:very confident
Coverage over the Query: 75-238
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Template: 3RGZ, chain A
Confidence level:very confident
Coverage over the Query: 27-207
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Template: 3UIM, chain A
Confidence level:very confident
Coverage over the Query: 333-373,392-630
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Template: 2QKR, chain A
Confidence level:confident
Coverage over the Query: 331-371,390-555
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Template: 3T8O, chain A
Confidence level:probable
Coverage over the Query: 284-557
View the alignment between query and template
View the model in PyMOL