Query 006740
Match_columns 633
No_of_seqs 234 out of 1195
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 07:41:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006740.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006740hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q9k_A Lactoperoxidase, LPO; b 100.0 7E-123 2E-127 1042.2 34.7 485 81-613 18-568 (595)
2 3nt1_A Prostaglandin-endoperox 100.0 4E-103 1E-107 879.3 27.0 428 73-619 95-556 (587)
3 1q4g_A Prostaglandin G/H synth 100.0 4E-102 2E-106 871.0 28.9 414 95-614 104-551 (553)
4 1d2v_C Myeloperoxidase; heme-p 100.0 2.8E-98 1E-102 824.8 30.7 401 167-615 12-443 (466)
5 1d2v_A Myeloperoxidase; heme-p 99.9 7.6E-26 2.6E-30 199.9 6.9 83 81-163 4-101 (104)
6 1b1v_A PSP1, protein (plasmato 17.8 33 0.0011 21.4 0.4 10 83-92 11-20 (26)
7 2eqq_A GBP, growth-blocking pe 15.8 38 0.0013 21.5 0.4 10 83-92 11-20 (28)
8 1tke_A Threonyl-tRNA synthetas 14.6 39 0.0013 32.6 0.3 36 563-600 99-134 (224)
9 3lqv_P Splicing factor 3B subu 13.1 1.3E+02 0.0045 21.1 2.5 18 279-296 11-28 (39)
10 1rpb_A Tricyclic peptide RP 71 12.6 66 0.0023 20.0 0.8 7 89-95 5-11 (26)
No 1
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...
Probab=100.00 E-value=6.5e-123 Score=1042.20 Aligned_cols=485 Identities=20% Similarity=0.294 Sum_probs=406.6
Q ss_pred CCcccCCccCcCCCCCCCCCCCCCCCccCCCCCCC--------------CCCCCCCChhHHHHHhhhcc-cccCCCCCch
Q 006740 81 EICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTS--------------TYGLLDPHPTVVATKLLARK-KFIDNGKQFN 145 (633)
Q Consensus 81 ~~~yRt~DGscNNl~~P~~G~a~t~f~R~lpp~~~--------------~~g~~lP~pR~VS~~l~~~~-~~~~~~~~~n 145 (633)
..+|||+||+|||+.||.||+|+|+|+|++||.|. .+|..||+||+||++|+... +...++..+|
T Consensus 18 ~~~yRt~DG~CNNl~~P~wGaa~t~f~R~lpp~Y~DGv~~Pr~~~~~~~~~g~~lP~~R~VS~~l~~~~~~~~~~~~~~t 97 (595)
T 3q9k_A 18 NSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQRKTRNGFRVPLAREVSNKIVGYLDEEGVLDQNRS 97 (595)
T ss_dssp SCSSCCSSCTTSSSSSTTTTCSSEECBCSSCCCCTTSSSCCTTSSTTCCBTTBCCCCHHHHHHHHTCCSCCTTCEEEEEE
T ss_pred CCCccCCCCCccCcCCcccCCCCCCccCCCCcccccccccccccccccccCCCCCCCHHHHHHHHHhcccccCCCCCCch
Confidence 48999999999999999999999999999999853 23558999999999999632 2222577899
Q ss_pred HHHHHHHHHHhhhhccCCCC---------------C----CcceeccCCC-CCCCCCCCCccccccccCCCCCCCC--CC
Q 006740 146 MIACSWIQFMIHDWTDHLED---------------S----KQVELTAPDE-EIASGCPLKSFKFFKTKGVPTSTPS--VK 203 (633)
Q Consensus 146 ~l~~~wgQfi~HD~~~~~~~---------------~----~~~~i~iP~~-~~~~~cp~~~~~~~Rt~~~~~~~~~--~~ 203 (633)
+|+|+|||||+|||++++.. | .|.+|.||.+ +.. .+...||+|+||..++..... .+
T Consensus 98 ~~~~~wGQfi~HDi~~t~~~~~~~~~~~~~~C~~~c~~~~~C~pI~ip~~Dp~~-~~~~~Cm~f~RS~~~~~~~~~~~~~ 176 (595)
T 3q9k_A 98 LLFMQWGQIVDHDLDFAPETELGSNEHSKTQCEEYCIQGDNCFPIMFPKNDPKL-KTQGKCMPFFRAGFVCPTPPYQSLA 176 (595)
T ss_dssp HHHHHHHHHHHHHHCCCCBCCSCTTCSHHHHHHHHCCCBTTBCCEECCTTCHHH-HHSCSEECCBCBCBSSCSSCCCSSC
T ss_pred HHHHHHHHHHHhhhhccCccccccccCCCcCccccccCCCCceeeeCCCCCCcc-cCCCceeEeecCCCcCCCCCCCcch
Confidence 99999999999999987432 1 2467888764 211 233459999999987642212 25
Q ss_pred CCCccCCCCccccccCCCCCHHhhhhhccCCC--CcccccC----CC--CCCCCC--------------CCCCCCCCCc-
Q 006740 204 TGSLNTRTPWWDASVIYGNNEEGMKRVRTFKD--GKLKIGG----DG--LLEHDE--------------KWIPISGDIR- 260 (633)
Q Consensus 204 ~~~~N~~T~~lD~S~IYGss~~~~~~LR~~~~--GkL~~~~----~G--~lP~~~--------------~g~~~aGD~R- 260 (633)
++|+|++|||||||+||||+++++++||++++ ||||++. +| +||.+. ..|+++||.|
T Consensus 177 reQiN~~Ts~lD~S~VYGss~~~~~~LR~~~~~~G~Lk~~~~~~~~g~~~lP~~~~~~~~c~~~~~~~~~~cf~aGD~R~ 256 (595)
T 3q9k_A 177 REQINAVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFRA 256 (595)
T ss_dssp CCBEECSCSSSSCHHHHCSSHHHHHHTBCCSSTTCCBCCCSSCCBTTBCCCCBCCCSSCHHHHTCTTTCCCCBCCSSTTT
T ss_pred HhhhccccceeeeeeccCCCHHHHHHHhCCCCCCceeecccccCCCCccCCCCCCCCCCcccccCCCCCCcccccCCccc
Confidence 79999999999999999999999999999998 9999875 45 888753 1278999999
Q ss_pred ccchhHHHHHHHHhhhhhHHHHHHHhhCCCCChHHHHHHHHHHHHHhhceeeeehhhHhhhccccccccccccccccccc
Q 006740 261 NFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGK 340 (633)
Q Consensus 261 N~~~gL~~lhtlf~REHNria~~L~~~nP~W~DE~LFqeAR~Iv~A~~Q~I~~~E~lP~iLg~~~~~~~m~~nw~gl~g~ 340 (633)
|++|+|++|||||+|||||||++|+++||+|+||+|||||||||+|+||||||+||||.|||.+ +.+
T Consensus 257 ne~p~L~~lhtlflREHNria~~L~~~nP~W~dE~LfQeAR~Iv~A~~Q~Ity~E~LP~ilG~~-~~~------------ 323 (595)
T 3q9k_A 257 SEQILLATAHTLLLREHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSE-MQK------------ 323 (595)
T ss_dssp TSBHHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHGGG-HHH------------
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHeeeeeHHHHHHHHhCch-hhh------------
Confidence 9999999999999999999999999999999999999999999999999999999999999876 321
Q ss_pred ccccccCCcccccccCCCCCCCCCCCCCCCcchhhhHHhhhh-hccCCCceeeccccCcCCCCCCCCccccccHHHHhcc
Q 006740 341 KFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFASVYRM-HSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGK 419 (633)
Q Consensus 341 ~~~~~~g~~~~~~~~g~~G~~~~~~~~v~~sis~EFaaayR~-Hslip~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~ 419 (633)
.. ..|.| |+++++|+|++||+||||| |||||+.+.+.+.+...... ...++|.+.+|+
T Consensus 324 ----~~--------~~~~g----Y~~~v~p~i~neF~aafRfgHsli~~~~~~~~~~~~~~~~-----~~~~~L~~~ff~ 382 (595)
T 3q9k_A 324 ----WI--------PPYQG----YNNSVDPRISNVFTFAFRFGHMEVPSTVSRLDENYQPWGP-----EAELPLHTLFFN 382 (595)
T ss_dssp ----HS--------CSCCC----CCTTSCCCCBTTHHHHGGGGGGGCCSEEECBCTTSSBCST-----TCEEEGGGGBTC
T ss_pred ----hC--------CCccC----CCCCCCCccHHHHHHHHHhHHhhCcchhhccCccccccCC-----CCceeHHHHhcC
Confidence 01 12334 6778999999999889999 99999999985543221111 137899999998
Q ss_pred ccccccccccHHHHHHHhhhccccccc-ccCchHHHHhhhhccCCCCCCCCchhHHHHHHHHHhhcCCCcHHHHHHHhCC
Q 006740 420 EGERRLSKIGMEQMLVSMGHQACGAVT-LWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVSRYNEFRRNLLM 498 (633)
Q Consensus 420 ~~~~~~~~~g~~~~l~~~~~q~~~~i~-~~~~~~~lr~~~~~~~~G~~~~~~~DL~alnIqRgRDhGlp~YN~~R~~cgl 498 (633)
+.. .+.+.|++.+++||..|+++.+. +++++++|++.+|... + ...++||+|+|||||||||||+||+||++|||
T Consensus 383 ~~~-~~~~~gid~llrGl~~q~a~~~~~d~~~~~~l~~~Lf~~~-~--~~~g~DL~alnIqRgRdhGlp~yn~~R~~~gl 458 (595)
T 3q9k_A 383 TWR-IIKDGGIDPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPT-H--KIHGFDLAAINLQRCRDHGMPGYNSWRGFCGL 458 (595)
T ss_dssp CHH-HHTTTCSHHHHHHHHHSEEECCCTTSCSCHHHHTCEECTT-S--CSEEECHHHHHHHHHHHTTCCCHHHHHHHTTC
T ss_pred hHH-hhhccchHHHHHHHhhCcccccCCCccCCHHHHHHhccCC-C--ccccccHHHHHHHHHHHhCCCCHHHHHHHcCC
Confidence 763 34567899999999999998432 3578999998775422 1 12389999999999999999999999999999
Q ss_pred CCCCCCccCC---CCHHHHHHHHHHhCCCCCccccchhhccccccCCCcccHHHHHHHHHHHHHhh-ccCCCCCCCCCCC
Q 006740 499 IPISKWEDLT---DDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISETAFFIFLLIASRRL-EADRFFTTNFNSK 574 (633)
Q Consensus 499 ~~~~sF~dl~---~~~e~~~~L~~lY~~~vddVDL~vG~laE~~~~G~~vg~T~~~iii~~~~r~l-~gDRF~ye~~~~~ 574 (633)
+++++|+||+ .+++++++|+++|+ +|||||||||+++|++++|+++|||+.||| ++||+++ +||||||| |++
T Consensus 459 ~~~~sf~dl~~~~~~~~~~~~l~~lY~-~~d~iDl~vG~l~E~~~~g~~~Gptf~~ii-~~qf~~lr~gDRf~ye--n~~ 534 (595)
T 3q9k_A 459 SQPKTLKGLQTVLKNKILAKKLMDLYK-TPDNIDIWIGGNAEPMVERGRVGPLLACLL-GRQFQQIRDGDRFWWE--NPG 534 (595)
T ss_dssp CCCCSHHHHHHHHTCHHHHHHHHHHHS-SGGGSCHHHHHHHSCCCTTBSSCHHHHHHH-HHHHHHHHHTCTTCTT--SBT
T ss_pred CCCCCHHHHhhhcCcHHHHHHHHHHhC-CccccceeecccccccCCCCCcCHHHHHHH-HHHHHHHHhcCCCeec--CCC
Confidence 9999999999 79999999999999 999999999999999999999999988885 6777777 89999999 578
Q ss_pred CCCHHHHHHHccCCcHHHHHHhhCCCCCccccccCCCcc
Q 006740 575 TYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMRCSSAFS 613 (633)
Q Consensus 575 ~fT~~ql~~I~k~~tl~~vic~n~~~~~~~~~~~~n~f~ 613 (633)
+||++||+||+|+ ||++|||+| ++|+. .+.+||.
T Consensus 535 ~ft~~ql~ei~~~-sla~iic~n-~~i~~---vq~~~F~ 568 (595)
T 3q9k_A 535 VFTEKQRDSLQKV-SFSRLICDN-THITK---VPLHAFQ 568 (595)
T ss_dssp TBCHHHHHHHTTC-CHHHHHHHH-SSCCE---EESSTTS
T ss_pred cCCHHHHHHHHhC-CHHHHHhcC-CCccc---ccHhhcc
Confidence 9999999999999 999999999 57764 4567776
No 2
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=100.00 E-value=4.1e-103 Score=879.34 Aligned_cols=428 Identities=24% Similarity=0.363 Sum_probs=356.3
Q ss_pred CCCCCCCCCCcccCCccCcCCCCCCCCCCCCCCCccCCCCCCCCC--------CCCCCChhHHHHHhhhcccccCCCCCc
Q 006740 73 NGQKYDTEEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTY--------GLLDPHPTVVATKLLARKKFIDNGKQF 144 (633)
Q Consensus 73 ~~~~~~~~~~~yRt~DGscNNl~~P~~G~a~t~f~R~lpp~~~~~--------g~~lP~pR~VS~~l~~~~~~~~~~~~~ 144 (633)
....|++. ++|||+||+|| +|+|.|+|||.|... +..||+||+||++|+++++++++..+.
T Consensus 95 ~p~~~~~~-~~Yrs~dg~~N----------~t~~~R~lPp~y~dg~~P~g~~~~~~LP~pr~vs~~l~~r~~~~p~~~~~ 163 (587)
T 3nt1_A 95 SPPTYNVH-YGYKSWEAFSN----------LSYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFIPDPQGS 163 (587)
T ss_dssp SSCCBBTT-BSSCCHHHHHC----------TTBCBBSSCCCCTTCSBTTBSSSCSSCCCHHHHHHHHTBCSSCCBCTTCB
T ss_pred CCCCCCCC-CCccccccccC----------CCeeecccCCccccCCCccccCCCCCCCCHHHHHHHHhcCCCcCCCCCCc
Confidence 33445443 79999999999 899999999986433 467999999999999999998555579
Q ss_pred hHHHHHHHHHHhhhhccCCCCCCcceeccCCCCCCCCCCCCccccccccCCCCCCCCCCCCCccCCCCccccccCCCCCH
Q 006740 145 NMIACSWIQFMIHDWTDHLEDSKQVELTAPDEEIASGCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNE 224 (633)
Q Consensus 145 n~l~~~wgQfi~HD~~~~~~~~~~~~i~iP~~~~~~~cp~~~~~~~Rt~~~~~~~~~~~~~~~N~~T~~lD~S~IYGss~ 224 (633)
|+|+++|||||+|||+.|.. ..| .++.|++|||||||+||||++
T Consensus 164 s~l~~~fgQ~i~Hd~f~t~~---------------~~~---------------------~~~~n~~t~~lD~S~IYGss~ 207 (587)
T 3nt1_A 164 NMMFAFFAQHFTHQFFKTDH---------------KRG---------------------PGFTRGLGHGVDLNHIYGETL 207 (587)
T ss_dssp BHHHHHHHHHHHTTTCCBCT---------------TTC---------------------TTBBSCTTCSCCCHHHHCSSH
T ss_pred cHHHHHHHHHHhhhccccCC---------------CCC---------------------CccccCccceeeeccCCCCCH
Confidence 99999999999999987721 011 145799999999999999999
Q ss_pred HhhhhhccCCCCcccccC-CC--CCCCCC--------------CCCCCCCCCc-ccchhHHHHHHHHhhhhhHHHHHHHh
Q 006740 225 EGMKRVRTFKDGKLKIGG-DG--LLEHDE--------------KWIPISGDIR-NFWAGFTLLQALFVKEHNAVCDKLKD 286 (633)
Q Consensus 225 ~~~~~LR~~~~GkL~~~~-~G--~lP~~~--------------~g~~~aGD~R-N~~~gL~~lhtlf~REHNria~~L~~ 286 (633)
+++++||++++||||++. +| ++|... ..|+++||.| |++|||++|||||+|||||||++|++
T Consensus 208 ~~~~~LR~~~~G~Lk~~~~~g~~~pP~~~~~~~~~~~~~~~~~~~cf~~GD~R~ne~pgL~alhtlflREHNriA~~L~~ 287 (587)
T 3nt1_A 208 DRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQ 287 (587)
T ss_dssp HHHHHHBCSSTTCBCCEEETTEEECCBHHHHCCCCCCCTTSCGGGCBCCSSTTTTSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhccCCCCCeeeeecCCCccCCCCCCCcccccccCCCCCcccccccCCcccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999863 34 666521 2378999999 99999999999999999999999999
Q ss_pred hCCCCChHHHHHHHHHHHHHhhceeeeehhhHhhhcccccccccccccccccccccccccCCcccccccCCCCCCCCCCC
Q 006740 287 HYPDLDDEKLYRHARLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDH 366 (633)
Q Consensus 287 ~nP~W~DE~LFqeAR~Iv~A~~Q~I~~~E~lP~iLg~~~~~~~m~~nw~gl~g~~~~~~~g~~~~~~~~g~~G~~~~~~~ 366 (633)
+||+|+||+||||||+||+|+||||||+||||.|||...+ ..|+.. ... | +..
T Consensus 288 ~nP~W~DE~LFQeAR~Iv~A~~Q~Ity~EyLP~ilG~~~~-----------------~~~dp~---~~~---~----~~~ 340 (587)
T 3nt1_A 288 EHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFK-----------------LKFDPE---LLF---N----QQF 340 (587)
T ss_dssp -CTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCCSSC-----------------CCCCGG---GGT---T----SCC
T ss_pred hCCCCcHHHHHHHHHHHHHhhheeeeHHHHHHHhcCcchh-----------------cccCcc---ccc---C----CCC
Confidence 9999999999999999999999999999999999986532 112211 111 1 112
Q ss_pred CCCCcchhhhHHhhhhhccCCCceeeccccCcCCCCCCCCccccccHHHHhccccccccccccHHHHHHHhhhccccccc
Q 006740 367 GVPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSKIGMEQMLVSMGHQACGAVT 446 (633)
Q Consensus 367 ~v~~sis~EFaaayR~Hslip~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~l~~~~~q~~~~i~ 446 (633)
+++++|++||++|||+||+||+.+.+.+ ..+++.+.+|++. .+.+.|++++++||+.|++++++
T Consensus 341 ~~~~~is~eF~~a~~~Hslip~~~~~~~--------------~~~~l~~~ff~p~--~~~~~gid~llrgl~~q~a~~~~ 404 (587)
T 3nt1_A 341 QYQNRIASEFNTLYHWHPLLPDTFNIED--------------QEYSFKQFLYNNS--ILLEHGLTQFVESFTRQIAGRVA 404 (587)
T ss_dssp CSCCCCBHHHHHHTCCGGGSCSSEEETT--------------EEECHHHHTTCTH--HHHHHHHHHHHHHHHHSBCBCSS
T ss_pred CcCchHHHHHHHHHhccccCCcccccCC--------------CcccHHHHhcCcc--ccchhhHHHHHHHHHHhhhhccc
Confidence 4577999999988988999999987632 2678999999864 34567899999999999999883
Q ss_pred -ccCchHHHHhhhhccCCCCCCCCchhHHHHHHHHHhhcCCCcHHHHHHHhCCCCCCCCccCCCCHHHHHHHHHHhCCCC
Q 006740 447 -LWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVSRYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDV 525 (633)
Q Consensus 447 -~~~~~~~lr~~~~~~~~G~~~~~~~DL~alnIqRgRDhGlp~YN~~R~~cgl~~~~sF~dl~~~~e~~~~L~~lY~~~v 525 (633)
.+|++ +.++||+|+|||||||||||+||+||++|||+++++|+||+.+++++++|+++|+ +|
T Consensus 405 ~~~n~~----------------~~~~DL~alnIqRGRDhGlp~YN~~R~~cgL~~~~tf~dl~~~~~~~~~L~~lY~-~~ 467 (587)
T 3nt1_A 405 GGRNVP----------------IAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKALYS-DI 467 (587)
T ss_dssp SSSCBC----------------GGGHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHSSSHHHHHHHHHHS-SG
T ss_pred ccccCc----------------hHHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhCCCHHHHHHHHHHhC-CH
Confidence 33431 1378999999999999999999999999999999999999999999999999999 99
Q ss_pred CccccchhhccccccCCCcccHHHHHHHHHHH-----HHhh-ccCCCCCCCCCCCCCCHHH-HHHHccCCcHHHHHHhhC
Q 006740 526 EKMDLQVGLHAEKKIKGFAISETAFFIFLLIA-----SRRL-EADRFFTTNFNSKTYTEKG-LEWVNKTETLKDVIDRHF 598 (633)
Q Consensus 526 ddVDL~vG~laE~~~~G~~vg~T~~~iii~~~-----~r~l-~gDRF~ye~~~~~~fT~~q-l~~I~k~~tl~~vic~n~ 598 (633)
||||||||+++|++++|++||||+.|| +.++ +.++ .||||| +|++||.+| ++||+|+ ||++|||+|+
T Consensus 468 ddIDL~vGglaE~~~pG~~vGpTf~ci-~~qf~l~~~~~~~r~gDrfw----~~~~Ft~~qgl~~I~~~-sL~~lic~N~ 541 (587)
T 3nt1_A 468 DVMELYPALLVEKPRPDAIFGETMVEL-GAPFSLKGLMGNPICSPQYW----KPSTFGGEVGFKIINTA-SIQSLICNNV 541 (587)
T ss_dssp GGCCHHHHHHHSCCSTTCSSCHHHHHH-HHHHHHHHHHTSGGGSTTTS----SGGGGTSHHHHHHHHTC-CHHHHHHHHS
T ss_pred hheeeecccccccCCCCccHHHHHHHH-HHHHHHHHHhcCcccCCccc----CcCccChHHHHHHHHHC-CHHHHHHhCC
Confidence 999999999999999999999999998 4554 2333 799999 568999777 9999999 9999999999
Q ss_pred CCCCccccccCCCcccCCCCC
Q 006740 599 PEMTKKWMRCSSAFSVWDSEP 619 (633)
Q Consensus 599 ~~~~~~~~~~~n~f~~w~~~~ 619 (633)
++ ...++|...+..+
T Consensus 542 ~~------~p~~~F~~p~~~~ 556 (587)
T 3nt1_A 542 KG------CPFTSFNVQDPQP 556 (587)
T ss_dssp TT------CCCCCSBCC----
T ss_pred CC------CCcceeECCCccc
Confidence 77 3567887666543
No 3
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=100.00 E-value=4.4e-102 Score=871.02 Aligned_cols=414 Identities=23% Similarity=0.316 Sum_probs=353.4
Q ss_pred CCCCCCCC--CCCCccCCCCCCCC--------CCCCCCChhHHHHHhhhcccccCCCCCchHHHHHHHHHHhhhhccCCC
Q 006740 95 SDDTIGSQ--GTFFGRNMPPSTST--------YGLLDPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLE 164 (633)
Q Consensus 95 ~~P~~G~a--~t~f~R~lpp~~~~--------~g~~lP~pR~VS~~l~~~~~~~~~~~~~n~l~~~wgQfi~HD~~~~~~ 164 (633)
.+|+||++ +|+|+|++||.|.+ .+..||+||+||++|+.++.+++.+..+|+|+|+|||||+|||+.+..
T Consensus 104 ~~pswgs~~n~t~~~R~lpp~y~Dg~~p~~~~~~~~LP~pr~vs~~l~~~~~~~p~~~~~s~l~~~fgQfi~HDi~~t~~ 183 (553)
T 1q4g_A 104 DYISWESFSNVSYYTRILPSVPRDCPTPMGTKGKKQLPDAEFLSRRFLLRRKFIPDPQGTNLMFAFFAQHFTHQFFKTSG 183 (553)
T ss_dssp SSCCHHHHHCTTBCEESSCCCCTTCSBTTBSSSCSSCCCHHHHHHHHTBCSSCCBCTTCBBHHHHHHHHHHHTTTCCBCT
T ss_pred CCCCCCCCCCCCceeeccCCCccCCCCcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCccHHHHHHHHHHhhhhhcccc
Confidence 56888877 79999999998632 236899999999999998877755778999999999999999988721
Q ss_pred CCCcceeccCCCCCCCCCCCCccccccccCCCCCCCCCCCCCccCCCCccccccCCCCCHHhhhhhccCCCCcccccC-C
Q 006740 165 DSKQVELTAPDEEIASGCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFKDGKLKIGG-D 243 (633)
Q Consensus 165 ~~~~~~i~iP~~~~~~~cp~~~~~~~Rt~~~~~~~~~~~~~~~N~~T~~lD~S~IYGss~~~~~~LR~~~~GkL~~~~-~ 243 (633)
.+..+++|++|||||||+||||+++++++||++++||||++. +
T Consensus 184 ------------------------------------~~~~~~~N~~T~~lD~S~vYGs~~~~~~~LR~~~~G~Lk~~~~~ 227 (553)
T 1q4g_A 184 ------------------------------------KMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLN 227 (553)
T ss_dssp ------------------------------------TTCTTBBSCTTCSSSCHHHHCSSHHHHHHHBCSSTTCBCCEEET
T ss_pred ------------------------------------ccchhhcccccccccccccCCCCHHHHHhhhcCCCCEecccCCC
Confidence 012368999999999999999999999999999999999865 4
Q ss_pred C--CCCCCC--------------CCCCCCCCCc-ccchhHHHHHHHHhhhhhHHHHHHHhhCCCCChHHHHHHHHHHHHH
Q 006740 244 G--LLEHDE--------------KWIPISGDIR-NFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSA 306 (633)
Q Consensus 244 G--~lP~~~--------------~g~~~aGD~R-N~~~gL~~lhtlf~REHNria~~L~~~nP~W~DE~LFqeAR~Iv~A 306 (633)
| ++|... ..|+++||.| ||+|+|++|||||+|||||||++|+++||+|+||+||||||+||+|
T Consensus 228 g~~~~P~~~~~~~~~~~~~~~~~~~cf~~GD~R~ne~p~L~~lhtlflReHNria~~L~~~nP~W~DE~LFQeAR~Iv~a 307 (553)
T 1q4g_A 228 GEVYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIG 307 (553)
T ss_dssp TEEECCBTTTSCCCCCCCTTCCGGGSBCCSSTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHH
T ss_pred CccCCCccCCCCCcccCCCCCCchhccccCccccCcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Confidence 5 666421 2478999999 9999999999999999999999999999999999999999999999
Q ss_pred hhceeeeehhhHhhhcccccccccccccccccccccccccCCcccccccCCCCCCCCCCCCCCCcchhhhHHhhhhhccC
Q 006740 307 VIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFASVYRMHSLL 386 (633)
Q Consensus 307 ~~Q~I~~~E~lP~iLg~~~~~~~m~~nw~gl~g~~~~~~~g~~~~~~~~g~~G~~~~~~~~v~~sis~EFaaayR~Hsli 386 (633)
+||||||+||||.|+|.... ..++. .+..+. ..+++++|++||++|||+||||
T Consensus 308 ~~Q~I~~~EyLp~ilg~~~~-----------------~~~dp---~~~~~~-------~~~~~~~is~EF~~ayR~Hsli 360 (553)
T 1q4g_A 308 ETIKIVIEEYVQQLSGYFLQ-----------------LKFDP---ELLFGA-------QFQYRNRIAMEFNQLYHWHPLM 360 (553)
T ss_dssp HHHHHHHHTHHHHHHCCSSC-----------------CCCCG---GGGTTS-------CCCCCCCCBHHHHHHTCCGGGS
T ss_pred HHHHHHHHHHHHhhcCCccc-----------------cccCc---ccccCC-------CcccCcchhHHHHHHhcccccC
Confidence 99999999999999976321 11211 111111 1246789999999889999999
Q ss_pred CCceeeccccCcCCCCCCCCccccccHHHHhccccccccccccHHHHHHHhhhcccccc-cccCchHHHHhhhhccCCCC
Q 006740 387 PDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSKIGMEQMLVSMGHQACGAV-TLWNYPLWMRNLVAHDINGE 465 (633)
Q Consensus 387 p~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~l~~~~~q~~~~i-~~~~~~~~lr~~~~~~~~G~ 465 (633)
|+.+.+.+ ..++|.+++|++. .+.+.|++++++||+.|+++++ +++|++.
T Consensus 361 p~~~~~~~--------------~~~~l~~~ff~~~--~~~~~g~~~ll~g~~~q~a~~~~~~~n~~~------------- 411 (553)
T 1q4g_A 361 PDSFRVGP--------------QDYSYEQFLFNTS--MLVDYGVEALVDAFSRQPAGRIGGGRNIDH------------- 411 (553)
T ss_dssp CSSEEETT--------------EEECHHHHTTCSS--HHHHHCHHHHHHHHHHSBCBCSSSSSCBCT-------------
T ss_pred CcccccCC--------------CcccHHHHhcCch--hhhcccHHHHHHHhhhchhhcccccccCcH-------------
Confidence 99987632 2678999999873 3556799999999999999998 5555421
Q ss_pred CCCCchhHHHHHHHHHhhcCCCcHHHHHHHhCCCCCCCCccCCCCHHHHHHHHHHhCCCCCccccchhhccccccCCCcc
Q 006740 466 DRPNPVDMAALEIYRDRERGVSRYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAI 545 (633)
Q Consensus 466 ~~~~~~DL~alnIqRgRDhGlp~YN~~R~~cgl~~~~sF~dl~~~~e~~~~L~~lY~~~vddVDL~vG~laE~~~~G~~v 545 (633)
.++||+|+|||||||||||+||+||++|||+++++|+||+.|++++++|+++|+ +|||||||||+++|++++|++|
T Consensus 412 ---~~~dL~alnIqRgRDhGlp~YN~~R~~~gL~~~~tf~dl~~d~~~~~~L~~lY~-~~ddiDL~vG~laE~~~~G~~~ 487 (553)
T 1q4g_A 412 ---HILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTGEKEMAAELEELYG-DIDALEFYPGLLLEKCHPNSIF 487 (553)
T ss_dssp ---TTHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHSSSHHHHHHHHHHS-SGGGCCHHHHHHHSCBCTTCSS
T ss_pred ---HHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhcCCHHHHHHHHHHhc-ChhhccccccccccccCCCCCc
Confidence 267999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhhc----cCCCCCCCCCCCCCCHHHHHHHcc-CCcHHHHHHhhCCCCCccccccCCCccc
Q 006740 546 SETAFFIFLLIASRRLE----ADRFFTTNFNSKTYTEKGLEWVNK-TETLKDVIDRHFPEMTKKWMRCSSAFSV 614 (633)
Q Consensus 546 g~T~~~iii~~~~r~l~----gDRF~ye~~~~~~fT~~ql~~I~k-~~tl~~vic~n~~~~~~~~~~~~n~f~~ 614 (633)
|||++|||..+||++++ +||||| ++++||++|+.||+| + ||++|||+|++++ +.++|..
T Consensus 488 Gpt~~~ii~~~~~~~l~~~~~~d~~~~---~~~~ft~~ql~ei~~~~-sla~iic~n~~~~------p~~~F~~ 551 (553)
T 1q4g_A 488 GESMIEMGAPFSLKGLLGNPICSPEYW---KASTFGGEVGFNLVKTA-TLKKLVCLNTKTC------PYVSFHV 551 (553)
T ss_dssp BHHHHHHHHHHHHHHHHTSGGGSTTTC---SGGGGTSHHHHHHHHTC-CHHHHHHTTSSSC------CCCCSBC
T ss_pred cHHHHHHHHHHHHHHHhhCcCCCcccc---CCCCcCHHHHHHHHHhC-CHHHHHHHcCCCC------CcccccC
Confidence 99999999888998874 888887 478999999999866 6 9999999999732 4566754
No 4
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C*
Probab=100.00 E-value=2.8e-98 Score=824.78 Aligned_cols=401 Identities=19% Similarity=0.270 Sum_probs=336.8
Q ss_pred CcceeccCCC-CCCCCCCCCccccccccCCCCCCCCCCCCCccCCCCccccccCCCCCHHhhhhhccCCC--CcccccC-
Q 006740 167 KQVELTAPDE-EIASGCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFKD--GKLKIGG- 242 (633)
Q Consensus 167 ~~~~i~iP~~-~~~~~cp~~~~~~~Rt~~~~~~~~~~~~~~~N~~T~~lD~S~IYGss~~~~~~LR~~~~--GkL~~~~- 242 (633)
.|.||.||.+ |..+. ...||+|.||..++......+++|+|++|||||||+||||+++++++||++++ ||||++.
T Consensus 12 ~C~pI~ip~~Dp~~~~-~~~cl~f~Rs~~~~~~g~~~~req~N~~T~~lD~S~vYGs~~~~~~~LR~~~~~~G~Lk~~~~ 90 (466)
T 1d2v_C 12 PCFPLKIPPNDPRIKN-QADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQR 90 (466)
T ss_dssp TBCCEECCTTCSSCCC-TTCEECCBCCCBSSTTCSSSCCCBEECSCSSSSCHHHHCSSHHHHHHHBCCSSSSCCBCCCSS
T ss_pred CCcceeCCCCCCCcCC-CCcceeeecCccccCCCCCCHHHHhhccccccccccCcCCCHHHHHHHhccCCCCCeeccCCc
Confidence 4678999975 43321 23799999999876432223469999999999999999999999999999987 9999864
Q ss_pred ---CC--CCCCCC--------------CCCCCCCCCc-ccchhHHHHHHHHhhhhhHHHHHHHhhCCCCChHHHHHHHHH
Q 006740 243 ---DG--LLEHDE--------------KWIPISGDIR-NFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARL 302 (633)
Q Consensus 243 ---~G--~lP~~~--------------~g~~~aGD~R-N~~~gL~~lhtlf~REHNria~~L~~~nP~W~DE~LFqeAR~ 302 (633)
+| +||.+. ..|+++||.| ||+|+|++|||||+|||||||++|+++||+|+||+||||||+
T Consensus 91 ~~~~g~~~lP~~~~~~~~c~~~~~~~~~~cf~~GD~R~ne~p~l~~lhtlflReHNria~~L~~~nP~W~DE~LFqeAR~ 170 (466)
T 1d2v_C 91 FQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARK 170 (466)
T ss_dssp CCBTTBCCCCBCCCTTCSGGGGCTTTCCCCBCCSSTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHH
T ss_pred cCCCCCcCCCCCCCCCCcccccccCCCcchhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHH
Confidence 44 788643 1378999999 899999999999999999999999999999999999999999
Q ss_pred HHHHhhceeeeehhhHhhhcccccccccccccccccccccccccCCcccccccCCCCCCCCCCCCCCCcchhhhHHhhhh
Q 006740 303 VTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFASVYRM 382 (633)
Q Consensus 303 Iv~A~~Q~I~~~E~lP~iLg~~~~~~~m~~nw~gl~g~~~~~~~g~~~~~~~~g~~G~~~~~~~~v~~sis~EFaaayR~ 382 (633)
||+|+||||||+||||.|||.+.+... . +.|.| |+++++|+|++||+|||||
T Consensus 171 Iv~a~~Q~I~~~EyLp~ilG~~~~~~~----------------~--------~~~~g----y~~~v~p~isnEF~aafRf 222 (466)
T 1d2v_C 171 IVGAMVQIITYRDYLPLVLGPTAMRKY----------------L--------PTYRS----YNDSVDPRIANVFTNAFRY 222 (466)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHH----------------S--------CCCCC----CCTTSCCSCBHHHHHHGGG
T ss_pred HHHHHHHHHhHHHHHHHHhCchhhhhc----------------C--------CcccC----CCCCCCCchhHHHHHHHhc
Confidence 999999999999999999998765420 1 12234 5788999999999889998
Q ss_pred -hccCCCceeeccccCcCCCCCCCCccccccHHHHhccccccccccccHHHHHHHhhhcccccc-cccCchHHHHhhhhc
Q 006740 383 -HSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSKIGMEQMLVSMGHQACGAV-TLWNYPLWMRNLVAH 460 (633)
Q Consensus 383 -Hslip~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~l~~~~~q~~~~i-~~~~~~~~lr~~~~~ 460 (633)
|||||+.+.+.+.+...... ...++|.+.+|++.. .+.+.|++.+++||+.|+++.. .+..+.+.|++.+|.
T Consensus 223 gHsli~~~~~~~~~~~~~~~~-----~~~~~l~~~~f~~~~-~~~~~g~d~~lrgl~~q~a~~~~~d~~l~~~l~~~lf~ 296 (466)
T 1d2v_C 223 GHTLIQPFMFRLDNRYQPMEP-----NPRVPLSRVFFASWR-VVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFE 296 (466)
T ss_dssp GGGGCCSEEECBCTTSSBCSS-----CSEEEGGGTTTCHHH-HHHTTCHHHHHHHHHHSEEECCBTTBCSCHHHHTCBTG
T ss_pred ccccCchhhccccccccccCC-----CCceeHHHHhcChHH-HhhccCchHHHHHHhhCccccccCchhhhHHHHHHhhc
Confidence 99999999986543221111 236889999988753 3456789999999999988743 234677888887764
Q ss_pred cCCCCCCCCchhHHHHHHHHHhhcCCCcHHHHHHHhCCCCCCCCccCC---CCHHHHHHHHHHhCCCCCccccchhhccc
Q 006740 461 DINGEDRPNPVDMAALEIYRDRERGVSRYNEFRRNLLMIPISKWEDLT---DDKEVIKVLQEVYGDDVEKMDLQVGLHAE 537 (633)
Q Consensus 461 ~~~G~~~~~~~DL~alnIqRgRDhGlp~YN~~R~~cgl~~~~sF~dl~---~~~e~~~~L~~lY~~~vddVDL~vG~laE 537 (633)
... +.++||+|+|||||||||||+||+||++|||++++||+||+ .|++++++|+++|+ +|||||||||+++|
T Consensus 297 ~~~----~~~~DL~alnIqRgRDhGlp~YN~~R~~~gL~~~~tf~dl~~~~~d~~~~~~L~~lY~-~~d~vDL~vG~laE 371 (466)
T 1d2v_C 297 QVM----RIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYG-TPNNIDIWMGGVSE 371 (466)
T ss_dssp GGS----SSCBCHHHHHHHHHHHTTCCCHHHHHHHTTCCCCCSHHHHHHHHTCHHHHHHHHHHHS-SGGGSCHHHHHHHS
T ss_pred ccC----ccchhHHHHHHHHHHHcCCCCHHHHHHHcCCCCCCCHHHHhhccCCHHHHHHHHHHhC-Cccccceeeccccc
Confidence 332 35899999999999999999999999999999999999999 79999999999999 99999999999999
Q ss_pred cccCCCcccHHHHHHHHHHHHHhh-ccCCCCCCCCCCCCCCHHHHHHHccCCcHHHHHHhhCCCCCccccccCC-CcccC
Q 006740 538 KKIKGFAISETAFFIFLLIASRRL-EADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMRCSS-AFSVW 615 (633)
Q Consensus 538 ~~~~G~~vg~T~~~iii~~~~r~l-~gDRF~ye~~~~~~fT~~ql~~I~k~~tl~~vic~n~~~~~~~~~~~~n-~f~~w 615 (633)
++++|+++|||+.||+ .+||+++ +||||||+ ||++||++|++||+|+ ||++|||+|+ +++. .+.+ ||..-
T Consensus 372 ~~~~G~~~Gptf~~ii-~~qf~rLr~gDRf~ye--n~~~ft~~ql~ei~~~-sl~~iic~n~-~~~~---iq~~~~F~~~ 443 (466)
T 1d2v_C 372 PLKRKGRVGPLLACII-GTQFRKLRDGDRFWWE--NEGVFSMQQRQALAQI-SLPRIICDNT-GITT---VSKNNIFMSN 443 (466)
T ss_dssp CCCTTCSSCHHHHHHH-HHHHHHHHHTCTTCTT--STTTSCHHHHHHHTTC-CHHHHHHHHS-SCCE---EECSCTTTCC
T ss_pred ccCCCCCCCHHHHHHH-HHHHHHHHhcCccccc--CCCcccchhhHHHHhC-CHHHHHHhcC-CCcc---cCCCccccCC
Confidence 9999999999988875 6777777 89999999 5899999999999999 9999999998 6663 3445 88754
No 5
>1d2v_A Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_A* 1d5l_A* 1d7w_A* 1dnu_A* 1dnw_A* 4dl1_A* 3zs1_A* 3f9p_A* 1mhl_A* 1myp_A* 3zs0_A*
Probab=99.92 E-value=7.6e-26 Score=199.90 Aligned_cols=83 Identities=20% Similarity=0.324 Sum_probs=72.9
Q ss_pred CCcccCCccCcCCCCCCCCCCCCCCCccCCCCCCC----C----------CCCCCCChhHHHHHhhhccc-ccCCCCCch
Q 006740 81 EICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTS----T----------YGLLDPHPTVVATKLLARKK-FIDNGKQFN 145 (633)
Q Consensus 81 ~~~yRt~DGscNNl~~P~~G~a~t~f~R~lpp~~~----~----------~g~~lP~pR~VS~~l~~~~~-~~~~~~~~n 145 (633)
..+|||+||+|||+.||.||+|+++|.|++||.|. . +|..||+||+||++|+++.+ ...++..+|
T Consensus 4 ~~~yRt~DG~cNNl~~P~~G~a~t~f~R~lpp~Y~DG~~~p~~~~~~~~~~g~~lP~pR~VS~~l~~~~~~~~~~~~~~t 83 (104)
T 1d2v_A 4 QDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERS 83 (104)
T ss_dssp CCSSCCSSCTTSSSSSTTTTCSSEECBCSSCCCCTTSSSCCTTSSTTCCBTTBCCCCHHHHHHHHTCCCGGGCCEEEEEE
T ss_pred CCCccCCCCCccCCCCCccCcCCCccccccCcccccCcccccccccccccCCCcCCCHHHHHHHHHhcccccCCCCCchH
Confidence 58999999999999999999999999999999853 1 25689999999999998765 223577899
Q ss_pred HHHHHHHHHHhhhhccCC
Q 006740 146 MIACSWIQFMIHDWTDHL 163 (633)
Q Consensus 146 ~l~~~wgQfi~HD~~~~~ 163 (633)
+|+|+|||||+|||++++
T Consensus 84 ~~~~~wgQfi~HDl~~t~ 101 (104)
T 1d2v_A 84 LMFMQWGQLLDHDLDFTP 101 (104)
T ss_dssp HHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhhHhhcC
Confidence 999999999999999985
No 6
>1b1v_A PSP1, protein (plasmatocyte-spreading peptide); insect cytokine, EGF-like; NMR {Synthetic} SCOP: j.8.1.1 PDB: 1b5n_A 1bqf_A 2eqh_A 2dj9_A 1hrl_A 1v28_A 2djc_A 1irr_A
Probab=17.77 E-value=33 Score=21.45 Aligned_cols=10 Identities=60% Similarity=1.076 Sum_probs=8.4
Q ss_pred cccCCccCcC
Q 006740 83 CYRTADGTCN 92 (633)
Q Consensus 83 ~yRt~DGscN 92 (633)
--||.||.|-
T Consensus 11 y~rtadgrck 20 (26)
T 1b1v_A 11 YMRTADGRCK 20 (26)
T ss_dssp CEECSSCCEE
T ss_pred ceECCCCccc
Confidence 4699999995
No 7
>2eqq_A GBP, growth-blocking peptide, long form; cytokine; NMR {Mythimna separata} SCOP: j.8.1.1 PDB: 2eqt_A
Probab=15.78 E-value=38 Score=21.51 Aligned_cols=10 Identities=50% Similarity=1.006 Sum_probs=8.3
Q ss_pred cccCCccCcC
Q 006740 83 CYRTADGTCN 92 (633)
Q Consensus 83 ~yRt~DGscN 92 (633)
--||.||.|-
T Consensus 11 y~rtadgrck 20 (28)
T 2eqq_A 11 YMRTPDGRCK 20 (28)
T ss_dssp EEECTTCCEE
T ss_pred ceECCCCccC
Confidence 4699999995
No 8
>1tke_A Threonyl-tRNA synthetase; ligase; 1.46A {Escherichia coli} SCOP: d.15.10.1 d.67.1.1 PDB: 1tje_A 1tkg_A* 1tky_A*
Probab=14.58 E-value=39 Score=32.55 Aligned_cols=36 Identities=14% Similarity=0.337 Sum_probs=27.0
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHccCCcHHHHHHhhCCC
Q 006740 563 ADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPE 600 (633)
Q Consensus 563 gDRF~ye~~~~~~fT~~ql~~I~k~~tl~~vic~n~~~ 600 (633)
+|+|||+-..+..+|+++|+.|++. |.++|.++.|-
T Consensus 99 ~~g~y~d~~~~~~~t~edl~~IE~~--m~~iI~~~~pi 134 (224)
T 1tke_A 99 DNGFYYDVDLDRTLTQEDVEALEKR--MHELAEKNYDV 134 (224)
T ss_dssp TTEEEEEEECSSCCCHHHHHHHHHH--HHHHHTTCCBC
T ss_pred CCeEEEEEeCCCCCCHHHHHHHHHH--HHHHHhCCCCE
Confidence 4667776222346999999999987 89999988864
No 9
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=13.14 E-value=1.3e+02 Score=21.07 Aligned_cols=18 Identities=22% Similarity=0.303 Sum_probs=14.7
Q ss_pred HHHHHHHhhCCCCChHHH
Q 006740 279 AVCDKLKDHYPDLDDEKL 296 (633)
Q Consensus 279 ria~~L~~~nP~W~DE~L 296 (633)
|+-.++...|--|+||+|
T Consensus 11 ~~~~ei~~RNrpltDEeL 28 (39)
T 3lqv_P 11 RWEREIDERNRPLSDEEL 28 (39)
T ss_dssp HHHHHHHHTTCCCCHHHH
T ss_pred HhhccchhhcCCCCHHHH
Confidence 456677889999999987
No 10
>1rpb_A Tricyclic peptide RP 71955; HIV replication inhibitor, replication inhibitor; NMR {Actinomycete SP9440} SCOP: j.24.1.1 PDB: 1rpc_A
Probab=12.62 E-value=66 Score=19.96 Aligned_cols=7 Identities=43% Similarity=1.004 Sum_probs=5.3
Q ss_pred cCcCCCC
Q 006740 89 GTCNHPS 95 (633)
Q Consensus 89 GscNNl~ 95 (633)
|||||..
T Consensus 5 gscn~fa 11 (26)
T 1rpb_A 5 GSCNDFA 11 (26)
T ss_dssp SSBCSSS
T ss_pred ecccCcC
Confidence 7888854
Done!