Query 006741
Match_columns 633
No_of_seqs 198 out of 291
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 07:43:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006741.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006741hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nkg_A Rhamnogalacturonase B; 100.0 2E-127 5E-132 1059.7 50.0 492 6-629 2-508 (508)
2 2nsm_A Carboxypeptidase N cata 97.8 3.2E-05 1.1E-09 84.3 9.0 95 331-452 320-415 (439)
3 1h8l_A Carboxypeptidase GP180 97.7 0.00012 4.1E-09 78.3 10.0 99 295-432 279-378 (380)
4 3mn8_A LP15968P; catalytic dom 97.6 6.7E-05 2.3E-09 81.9 7.0 90 332-445 337-428 (435)
5 1uwy_A Carboxypeptidase M; met 97.5 8.2E-05 2.8E-09 80.9 6.7 92 331-446 295-390 (426)
6 4aw7_A GH86A beta-porphyranase 96.3 0.0037 1.3E-07 70.2 5.7 82 526-614 491-575 (591)
7 1xpn_A Hypothetical protein PA 96.0 0.02 6.8E-07 54.8 8.7 95 329-426 41-166 (170)
8 2w87_A Esterase D, XYL-CBM35; 96.0 0.056 1.9E-06 49.6 11.4 90 526-631 41-132 (139)
9 3qec_A Putative carbohydrate b 95.8 0.061 2.1E-06 50.5 10.9 95 329-426 21-146 (150)
10 2wz8_A Cellulosome protein doc 95.8 0.03 1E-06 52.7 8.9 87 526-629 49-148 (156)
11 2w3j_A Carbohydrate binding mo 95.2 0.043 1.5E-06 50.8 7.6 87 526-630 41-129 (145)
12 2w47_A Lipolytic enzyme, G-D-S 94.8 0.11 3.7E-06 47.7 9.2 87 526-630 42-131 (144)
13 2bgo_A Endo-B1,4-mannanase 5C; 93.4 0.31 1.1E-05 45.2 9.0 87 524-631 36-123 (140)
14 2vzp_A Aocbm35, EXO-beta-D-glu 93.3 0.35 1.2E-05 43.1 9.2 85 526-627 41-127 (127)
15 3kcp_A Cellulosomal-scaffoldin 93.2 0.15 5.1E-06 53.2 7.3 64 330-407 156-223 (321)
16 2xsu_A Catechol 1,2 dioxygenas 89.4 0.75 2.6E-05 48.0 7.8 63 330-398 135-202 (312)
17 2boy_A 3-chlorocatechol 1,2-di 88.7 0.51 1.7E-05 47.9 5.8 65 329-399 100-169 (254)
18 1uxz_A Cellulase B; carbohydra 88.3 1.6 5.3E-05 39.4 8.2 77 536-629 52-129 (131)
19 2azq_A Catechol 1,2-dioxygenas 88.1 0.89 3E-05 47.4 7.3 64 329-398 130-198 (311)
20 2bum_B Protocatechuate 3,4-dio 83.6 2.3 7.7E-05 42.8 7.4 65 329-399 76-150 (241)
21 3th1_A Chlorocatechol 1,2-diox 83.5 1.5 5E-05 44.7 6.0 64 330-399 98-166 (260)
22 3t63_M 3,4-PCD, protocatechuat 83.1 1.9 6.6E-05 43.3 6.6 67 327-399 73-149 (238)
23 1tmx_A Hydroxyquinol 1,2-dioxy 82.9 1.9 6.4E-05 44.7 6.6 65 329-399 131-199 (293)
24 2y8k_A Arabinoxylanase, carboh 82.8 4.7 0.00016 44.1 10.3 78 536-631 407-484 (491)
25 1dmh_A 1,2-CTD, catechol 1,2-d 82.7 1.2 4.2E-05 46.3 5.3 63 331-399 133-202 (311)
26 2bum_A Protocatechuate 3,4-dio 82.6 1.4 4.8E-05 43.4 5.4 64 329-398 50-124 (209)
27 2cdp_A Beta-agarase 1; carbohy 82.3 2.2 7.4E-05 39.9 6.4 81 535-628 77-159 (160)
28 3n9t_A PNPC; phospholipid bind 79.8 3.2 0.00011 42.8 7.1 65 329-399 127-196 (290)
29 3t63_A 3,4-PCD, protocatechuat 78.8 2.2 7.6E-05 41.7 5.3 65 329-399 46-116 (200)
30 3hhy_A 1,2-CTD, catechol 1,2-d 78.4 2.6 8.8E-05 43.3 5.8 63 331-399 131-198 (280)
31 3o5u_A Chlorocatechol 1,2-diox 76.9 3 0.0001 42.4 5.7 63 330-398 102-170 (257)
32 1ti6_B Pyrogallol hydroxytrans 76.2 2.7 9.3E-05 42.8 5.3 48 379-431 227-274 (274)
33 1w9s_A BH0236 protein, BHCBM6; 75.7 16 0.00053 33.1 9.8 81 537-629 59-140 (142)
34 3irp_X URO-adherence factor A; 73.9 4.9 0.00017 43.7 6.8 66 330-404 304-372 (429)
35 2v4v_A GH59 galactosidase; hyd 72.6 14 0.00049 32.7 8.6 79 537-628 49-128 (129)
36 1uxx_X Xylanase U; carbohydrat 70.9 24 0.00082 31.5 9.7 77 537-630 51-129 (133)
37 3oba_A Beta-galactosidase; TIM 70.1 92 0.0031 37.4 17.1 41 4-45 745-785 (1032)
38 1tg7_A Beta-galactosidase; TIM 63.6 6.3 0.00022 47.0 5.4 72 524-613 855-931 (971)
39 2h4e_A Transthyretin; amyloid, 60.2 6.2 0.00021 35.9 3.5 68 330-411 8-79 (127)
40 4ank_A Transthyretin; hormone 59.6 4.1 0.00014 38.0 2.3 66 331-411 29-99 (147)
41 2vzs_A CSXA, EXO-beta-D-glucos 55.3 2.5 8.5E-05 50.7 0.0 85 525-627 945-1032(1032)
42 1oo2_A Transthyretin; retinol- 55.1 4.4 0.00015 36.5 1.6 54 349-411 14-71 (119)
43 1f86_A Transthyretin Thr119Met 54.8 8.9 0.0003 34.3 3.5 54 349-411 13-70 (115)
44 1uy4_A Endo-1,4-beta-xylanase 54.0 42 0.0014 30.5 8.2 76 537-629 68-143 (145)
45 2g2n_A Transthyretin-like prot 53.1 17 0.00057 32.4 5.0 67 330-411 2-72 (114)
46 4hg6_B Cellulose synthase subu 53.0 14 0.00049 42.3 5.7 77 523-611 319-402 (707)
47 4hg6_B Cellulose synthase subu 52.5 8.2 0.00028 44.3 3.6 73 523-612 62-139 (707)
48 1od3_A Putative xylanase; hydr 52.3 49 0.0017 30.9 8.5 77 537-630 90-166 (168)
49 3fn9_A Putative beta-galactosi 51.8 7.6 0.00026 44.6 3.3 69 523-613 63-132 (692)
50 3og2_A Beta-galactosidase; TIM 50.6 12 0.00041 44.6 4.7 70 524-610 887-960 (1003)
51 3uaf_A TTR-52; beta barrel/san 49.2 21 0.00071 31.9 5.0 52 330-391 3-56 (117)
52 1yua_A Topoisomerase I; gene-r 48.3 7.8 0.00027 34.5 2.0 85 110-219 23-110 (122)
53 3lpf_A Beta-glucuronidase; alp 46.6 14 0.00049 41.4 4.4 66 524-612 71-138 (605)
54 3kpt_A Collagen adhesion prote 46.2 23 0.0008 37.0 5.7 46 349-402 19-64 (355)
55 3qva_A Transthyretin-like prot 45.4 20 0.00068 32.1 4.2 63 330-411 8-73 (116)
56 3c7f_A Xylanase D, endo-1,4-be 43.5 81 0.0028 34.0 9.7 80 537-628 406-485 (487)
57 2ww8_A RRGA, cell WALL surface 43.0 49 0.0017 39.1 8.3 81 330-425 46-128 (893)
58 2h0e_A Transthyretin-like prot 42.2 12 0.00041 33.7 2.3 63 332-412 9-76 (121)
59 1yq2_A Beta-galactosidase; gly 40.9 14 0.00049 44.3 3.4 67 523-612 121-191 (1024)
60 3lvt_A Glycosyl hydrolase, fam 40.5 3.9E+02 0.013 31.3 15.5 120 16-150 528-681 (899)
61 3cmg_A Putative beta-galactosi 39.6 20 0.00069 40.6 4.2 69 522-612 51-120 (667)
62 3gm8_A Glycoside hydrolase fam 38.3 20 0.00067 41.9 3.9 67 524-613 70-137 (801)
63 3bga_A Beta-galactosidase; NYS 37.7 15 0.00052 44.0 3.0 67 524-612 130-196 (1010)
64 2x5p_A FBA2, fibronectin bindi 37.5 58 0.002 29.0 6.1 42 350-402 40-81 (121)
65 2pz4_A Protein GBS052; SPAB, G 36.2 22 0.00077 34.9 3.5 46 380-426 177-224 (239)
66 3e8v_A Possible transglutamina 35.0 2E+02 0.0068 24.1 9.0 58 334-408 3-64 (82)
67 2je8_A Beta-mannosidase; glyco 34.8 18 0.00061 42.4 2.9 66 524-611 68-134 (848)
68 2pz4_A Protein GBS052; SPAB, G 34.4 14 0.00048 36.4 1.7 25 378-402 71-95 (239)
69 1cwv_A Invasin; integrin-bindi 34.0 1.6E+02 0.0055 32.1 10.2 75 331-422 27-103 (492)
70 3d3a_A Beta-galactosidase; pro 31.9 43 0.0015 37.9 5.2 68 521-613 508-575 (612)
71 3v9f_A Two-component system se 31.9 42 0.0014 37.9 5.3 26 378-403 731-756 (781)
72 3iwv_A 5-hydroxyisourate hydro 31.2 17 0.00058 33.5 1.5 67 331-411 25-96 (138)
73 4fxt_A Uncharacterized protein 29.4 1.6E+02 0.0056 28.6 8.2 64 331-405 7-70 (202)
74 4a2l_A BT_4663, two-component 28.6 38 0.0013 38.3 4.2 26 378-403 737-762 (795)
75 3oba_A Beta-galactosidase; TIM 27.9 17 0.00058 43.7 1.1 68 523-612 115-183 (1032)
76 3isy_A Bsupi, intracellular pr 27.8 52 0.0018 29.5 4.0 15 391-405 89-103 (120)
77 1jz7_A Lactase, beta-galactosi 27.2 25 0.00086 42.2 2.4 68 523-612 122-190 (1023)
78 3ott_A Two-component system se 27.0 46 0.0016 37.4 4.5 27 378-404 702-729 (758)
79 1jz7_A Lactase, beta-galactosi 26.2 60 0.0021 38.9 5.4 37 8-45 740-776 (1023)
80 3qht_C Monobody YSMB-1; fibron 24.1 66 0.0023 26.0 3.8 37 383-419 56-94 (97)
81 1b4r_A Protein (PKD1_human); P 24.0 63 0.0021 26.8 3.6 28 392-419 52-79 (80)
82 3bwu_D FIMD, outer membrane us 23.4 72 0.0025 28.0 4.2 15 391-405 27-41 (125)
83 3q1n_A Galactose mutarotase re 22.4 88 0.003 31.5 5.2 32 16-47 3-36 (294)
84 3lso_A Putative membrane ancho 22.3 38 0.0013 36.1 2.3 72 54-145 374-451 (489)
85 2p9r_A Alpha-2-M, alpha-2-macr 21.9 3.4E+02 0.011 22.3 9.2 67 323-404 11-85 (102)
86 3nbc_A Ricin B-like lectin; la 21.1 1.1E+02 0.0037 28.0 5.0 39 350-398 25-71 (148)
87 3b83_A Ten-D3; beta sheet, com 20.9 78 0.0027 25.8 3.7 22 383-404 53-75 (100)
88 3t04_D Monobody 7C12; engineer 20.9 57 0.0019 27.0 2.8 36 383-419 62-100 (103)
89 3bs6_A Inner membrane protein 20.5 66 0.0022 32.2 3.7 28 13-41 4-31 (280)
90 3hn5_A Putative exported prote 20.2 2.6E+02 0.0089 27.4 7.7 62 331-402 10-71 (215)
91 3hn3_A Beta-G1, beta-glucuroni 20.1 38 0.0013 37.9 2.0 67 524-612 81-154 (613)
No 1
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=100.00 E-value=1.6e-127 Score=1059.66 Aligned_cols=492 Identities=20% Similarity=0.294 Sum_probs=430.0
Q ss_pred eEEEEcCCEEEEEECC---eEEEEEeCCceeEEEEEECCeeccccccCCCCcceeEEEEecCCCCCCcccccccceEEEE
Q 006741 6 VQLNTKHRRLVVMDNG---LVQVTLSNPEGEVIGIKYNEIDNVLETQNEEDNRGYWDVVWYEPEKQGSYDKLIATDFKVI 82 (633)
Q Consensus 6 v~l~~~g~~~~vidNg---~l~~tv~k~~G~itsi~y~G~~nll~~~~~~~~~GY~d~~w~~~g~~~~~~~~~gt~~~vi 82 (633)
..+++++++ |||||| +|+|+|+|++|+||||+|+|+|+|+ .++++++| +.+|. + .++++
T Consensus 2 ~g~t~~~~~-~vvd~g~n~~l~~tv~k~~G~itsi~y~G~e~~~--~~~~s~~g------sg~G~-~--------~~~~~ 63 (508)
T 1nkg_A 2 FGITTSSSA-YVIDTNAPNQLKFTVSRSSCDITSIIHYGTELQY--SSQGSHIG------SGLGS-A--------TVTAT 63 (508)
T ss_dssp CEEEECSSE-EEEECCCTTCEEEEEETTTCCEEEEEETTEECBC--SSSCBEET------TCCSS-C--------EEEEE
T ss_pred ccEEecCCE-EEEECCCCCEEEEEEeCCCceEEEEEECCEEccc--cCCCcccc------cCCCc-c--------eEEEE
Confidence 357899999 999655 9999999999999999999998777 46777888 22222 1 34444
Q ss_pred eecCCEEEEEEEEeeccccCCCccccceeEEEEEEcCcceeEEEEEeeccCCCCCCCCcceEEEEEeCCCCcceeeeecc
Q 006741 83 MQDENQVEVSFTRTWNISLRGSLAPLNVDKRYIMRRGVSGFYFYAIMERKEGWPDVDMDQIRTVFKLQQNKFHFMAISND 162 (633)
Q Consensus 83 ~~~~~~i~vs~~~~~~~s~~g~~~~~~l~~~~v~r~g~sgiY~y~i~~~~~~~p~~~lge~R~v~Rl~~~~f~~~~~~d~ 162 (633)
+++++|+|||++ + +||||||||+|++|||||++++ .+++|+|+|+||||++++|++
T Consensus 64 -~~~~~i~vs~~~-------~-----~l~~~~v~~~g~sg~Y~y~~~~-----~~~~lge~R~v~Rl~~~~f~~------ 119 (508)
T 1nkg_A 64 -QSGDYIKVTCVT-------D-----TLTQYMVVHNGDPIIHMATYIT-----AEPSIGELRFIARLNSDLLPN------ 119 (508)
T ss_dssp -EETTEEEEEEEC-------S-----SEEEEEEEETTCCEEEEEEEES-----SCCTTSCEEEEEEECTTTCCE------
T ss_pred -ecCCEEEEEEEe-------C-----CceEEEEEeCCCceEEEEEeec-----cCCCCCceEEEEEcChhhCCC------
Confidence 357999999997 2 8999999999999999999884 378999999999999999976
Q ss_pred ccccCCCCcccCCCccccccceEEecCCCCCCCCceeeceeeecccccccceEEEEcCCCCeEEEEEcCCCCcccCCCce
Q 006741 163 RQRIMPMPEDRATGQPLAYPEAVLLTDPINPDLRGEVDDKYQYSSEDKDIRVHGWISSDPPVGFWMITPSDEFRSGGPNK 242 (633)
Q Consensus 163 r~~~mP~~~d~~~g~~l~~~e~v~l~~~~~~~~~G~~~sKY~~s~~~~d~~vhG~~~~g~~vG~W~I~ps~E~~sGGP~k 242 (633)
.+|.||+|+++ .|++ +++|+++.. +|+++||||||+++||++||||++ ++||||||+|++||++|||||
T Consensus 120 ~~r~~~~p~~~-~~~~-v~~~d~~~l-------~G~~~~KY~~s~~~~D~~vhG~~~--~~vG~w~I~~s~E~~sGGP~k 188 (508)
T 1nkg_A 120 EEPFGDVSTTA-DGTA-IEGSDVFLV-------GSETRSKFYSSERFIDDQRHCIAG--DAHRVCMILNQYESSSGGPFH 188 (508)
T ss_dssp EETTGGGGCCT-TCEE-EETTTEEEE-------TTEEEEGGGGCCBGGGCSEEEEEC--SSCEEEEECCCCTTCSSCTTC
T ss_pred ccccCCCCccc-cCcE-eeeccceee-------CCEEccceeccccceecceEEEEC--CCeEEEEEcCCcccccCCCcc
Confidence 26899999874 4554 788988665 899999999999999999999997 999999999999999999999
Q ss_pred ecccccCCc---ceEEEEeeeeccCCcccccccCCcCcc-eeeceEEEEEcCCCCCCCccccHHHHHHHHHHHhccCCCC
Q 006741 243 QDLTSHVGP---VVLSMFTSTHYAGKEINTEFRNGEPWK-KVFGPALVYLNSVSSEEKPLNLWEDAKRQMMVEVRKWPYN 318 (633)
Q Consensus 243 qdL~~h~g~---~~l~~~~s~H~~g~~~~~~~~~ge~w~-kv~GP~~~y~N~g~~~~~~~~l~~Da~~~~~~E~~~WPy~ 318 (633)
|||++|++| ++||||+|+|++ +|.++ |||||||||||+|++++ ++|||+
T Consensus 189 qdL~~h~~~~~~~~~~y~~s~H~~----------t~~~~~g~~GP~~~y~n~g~~~~-----------------~~wpys 241 (508)
T 1nkg_A 189 RDINSNNGGSYNALYWYMNSGHVQ----------TESYRMGLHGPYSMYFSRSGTPS-----------------TSIDTS 241 (508)
T ss_dssp BCCCEEECSSCEEEEEEEECSTTC----------CSCCCCEEEEEEEEEEESSCCCC-----------------SCCCCG
T ss_pred hhhhccCCcccceeeeeEeecccc----------cccccccccccEEEEECCCCCCC-----------------CCCCCc
Confidence 999999999 899999999986 45555 99999999999998753 699999
Q ss_pred CCCC---CCCCCCCCceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceEeCcccCC
Q 006741 319 FPES---VDFPKRNQRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSIKNVRQG 395 (633)
Q Consensus 319 f~~~---~~y~~~~qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI~nVrpG 395 (633)
|+++ ++|||+++||+|+|+|+ + .|+....|++ |. +|+|||||+||++|+|+|++||||
T Consensus 242 f~~s~~~~~y~~~~~RGtVsG~V~--G-------~~~~~~avv~--------~~--~k~~qywt~td~~G~FtI~~V~pG 302 (508)
T 1nkg_A 242 FFADLDIKGYVAASGRGKVAGTAS--G-------ADSSMDWVVH--------WY--NDAAQYWTYTSSSGSFTSPAMKPG 302 (508)
T ss_dssp GGGGTTCTTCCCGGGCBEEEEEEE--S-------SCTTSCEEEE--------EE--CSSCEEEEECCTTCEEECCCBCSE
T ss_pred cccccCccCCcCcccccEEEEEEc--C-------ccCCceEEEE--------Ec--CCCceeEEEECCCCcEEeCCcCCc
Confidence 9998 99999999999999985 3 4444443443 33 899999999999999999999999
Q ss_pred ceEEEEEECceeeeeeeeeeEEEecCceeeecceEecCCCCCCceeEEeccCCCcceeecCCCCCccccccccCCChhhh
Q 006741 396 DYNLYAWIPGIVGDYKYSANITVRAGSNINLGVLVYEPPRKGPTLWEIGIPDRSAAEFFVPDPYPTLANQLYTNHPEKFR 475 (633)
Q Consensus 396 tY~L~a~~~G~~G~~~~~~~VtV~aG~t~~l~~l~~~~p~~g~~LweIGi~Drta~eF~~~d~~~~~~n~~~~~~~d~~r 475 (633)
+|+|+||++|+ ...+.+|+|++|++++++ |+|+++ ++++|||||+|||+|+||+++| +.++|| |++||
T Consensus 303 tY~L~a~~~G~---~~~~~~VtV~aG~t~~l~-i~~~~~-~g~~iW~IG~pDrta~eF~~~d------~~~~~h-p~~~r 370 (508)
T 1nkg_A 303 TYTMVYYQGEY---AVATSSVTVSAGSTTTKN-ISGSVK-TGTTIFKIGEWDGQPTGFRNAA------NQLRMH-PSDSR 370 (508)
T ss_dssp EEEEEEEETTE---EEEEEEEEECTTCEEECC-EECCCC-CCSEEEEEECSSSSCTTSBTHH------HHTTSC-TTCTT
T ss_pred eEEEEEEECce---EEEEeEEEEcCCCeeEee-eEEecC-CCCeeEEeeCCCCCchhhcCCC------cccccC-cchhc
Confidence 99999999888 366677999999999997 999976 8999999999999999999998 234666 67899
Q ss_pred cchhhhhhccccCCCCeeEEeeccCCCCCceeEEEEeeCCCCCCCCeeEEEEEEecCCCCCccEEEEEEeccc-CCCceE
Q 006741 476 QYGLWERYVDLYRNDDLEYTVGDSYHAKDWFFAHVTRDVGNRTYKPTTWRIIFELKHLNNNGHYTLQLALASA-TDSDLH 554 (633)
Q Consensus 476 ~yglW~r~~~~~P~~dl~ytVG~S~~~~Dw~ya~~~~~~~~~~~~~~~w~I~F~L~~~~~~~~~tLriala~a-~~~~~~ 554 (633)
+| +| +||+||||+|++ +||||||| +.+ .++|+|+|+|+++| .++|||||+||+| +++++|
T Consensus 371 ~~-~W---------~~l~ytVG~S~~-~Dw~ya~~-~~~------~~~w~I~F~l~~~~-~~~~tLri~la~a~a~~~~q 431 (508)
T 1nkg_A 371 MS-SW---------GPLTYTVGSSAL-TDFPMAVF-KSV------NNPVTIKFTATSAQ-TGAATLRIGTTLSFAGGRPQ 431 (508)
T ss_dssp SC-CC---------CSCEEETTTSCG-GGSBSEEE-TTT------TCCEEEEEEECGGG-CSCEEEEEEEEEEETTCEEE
T ss_pred cc-cc---------CCeEEEeCcCch-hcCCeEEE-CCC------CCcEEEEEEcCccc-CCceEEEEEehhhccCCCeE
Confidence 98 87 479999999999 79999999 322 37899999999987 5799999999998 689999
Q ss_pred EEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeeeecEEEEEEeeCCC--CC--ceEEEEEEEEec
Q 006741 555 VRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGRNTIYLTQSRSRS--PF--QGVLYDYIRLEG 629 (633)
Q Consensus 555 V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~g~s--~~--~~vmyD~IrLe~ 629 (633)
|+|||+..+.| .++.+++||||+||++||+|++++|+||+++|++|+|+|+|+++++++ +| ++|||||||||.
T Consensus 432 V~VN~~~~~~~--~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~~s~~~~fls~~vmyD~I~L~~ 508 (508)
T 1nkg_A 432 ATINSYTGSAP--AAPTNLDSRGVTRGAYRGLGEVYDVSIPSGTIVAGTNTITINVISGSSGDTYLSPNFIFDCVELFQ 508 (508)
T ss_dssp EEETTEECCCC--CCCCCCCSCCGGGTCCCSCCCEEEEEECTTSSCSEEEEEEEEEECSCCCSGGGSSEEEEEEEEEEC
T ss_pred EEECCcCCcCc--cccccCCCCeEEecceeeeeEEEEEEEcHHHeecCceEEEEEeccCCCCCccccccEEEEEEEecC
Confidence 99999876655 455689999999999999999999999999999999999999999986 67 699999999984
No 2
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=97.83 E-value=3.2e-05 Score=84.33 Aligned_cols=95 Identities=15% Similarity=0.160 Sum_probs=61.8
Q ss_pred ceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceEeCcccCCceEEEEEECceeeee
Q 006741 331 RGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSIKNVRQGDYNLYAWIPGIVGDY 410 (633)
Q Consensus 331 RGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~ 410 (633)
.++|+|+|+-.++ .|..+|.|.+. +....+.||.+|.|.+ .++||+|+|++.+.|+.
T Consensus 320 ~~~i~G~V~D~~g------~pi~gA~V~v~-------------~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--- 376 (439)
T 2nsm_A 320 HQGIKGMVLDQNY------NNLANAVISVS-------------GINHDVTSGDHGDYFR-LLLPGIYTVSATAPGYD--- 376 (439)
T ss_dssp SCSEEEEEECTTS------CBCTTCEEEET-------------TEEEEEECCTTSEEEE-CCCSEEEEEEEECTTEE---
T ss_pred ccceEEEEEcCCC------CCccceEEEEE-------------cccceeEECCCCeEEE-ccCCeeEEEEEEecCce---
Confidence 5889999965555 88999999984 2335688999999998 59999999999998776
Q ss_pred eeeeeEEE-ecCceeeecceEecCCCCCCceeEEeccCCCcce
Q 006741 411 KYSANITV-RAGSNINLGVLVYEPPRKGPTLWEIGIPDRSAAE 452 (633)
Q Consensus 411 ~~~~~VtV-~aG~t~~l~~l~~~~p~~g~~LweIGi~Drta~e 452 (633)
.....|+| .++.++ . ++++.+ ...+|-||.+.+.+..+
T Consensus 377 ~~~~~v~v~~~~~~~-~-~~~L~~--~~~~L~eVvV~~~~~~~ 415 (439)
T 2nsm_A 377 PETVTVTVGPAEPTL-V-NFHLKR--SIPQVSPVRRAPSRRHG 415 (439)
T ss_dssp CEEEEEEECSSSCEE-C-CEECEE--C----------------
T ss_pred eEEEEEEEecCCcce-E-eEEEcc--CCCccccEEEecCCCCC
Confidence 44456888 666654 3 688874 57899999998866543
No 3
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=97.67 E-value=0.00012 Score=78.31 Aligned_cols=99 Identities=17% Similarity=0.255 Sum_probs=72.7
Q ss_pred CCccccHHHHHHHHHHHhccCCCCCCCCCCCCCCCCceEEEEEEEEc-cccccccccccCccEEEecCCCCCCcccccCc
Q 006741 295 EKPLNLWEDAKRQMMVEVRKWPYNFPESVDFPKRNQRGGVFGQLRVH-DRYISNRLMWADSAYVGLAAPGGVGSWERDSK 373 (633)
Q Consensus 295 ~~~~~l~~Da~~~~~~E~~~WPy~f~~~~~y~~~~qRGtVsG~l~~s-d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k 373 (633)
..+...|++.+..+.+=.. +..++|+|+|+-. ++ .|..+|.|.|.
T Consensus 279 ~~l~~~w~~n~~~l~~~~~---------------~v~~~i~G~V~D~~~g------~pi~~A~V~v~------------- 324 (380)
T 1h8l_A 279 EELPKYWEQNRRSLLQFIK---------------QVHRGIWGFVLDATDG------RGILNATISVA------------- 324 (380)
T ss_dssp GGHHHHHHHHHHHHHHHHH---------------GGGCEEEEEEEETTTC------SBCTTCEEEET-------------
T ss_pred HHHHHHHHHHHHHHhhhhh---------------hccccceEEEEeCCCC------CccCceEEEEe-------------
Confidence 4455678777655432111 1258999999764 44 78899999984
Q ss_pred cceeEEEeCCccceEeCcccCCceEEEEEECceeeeeeeeeeEEEecCceeeecceEec
Q 006741 374 GYQFWTKANKRGYFSIKNVRQGDYNLYAWIPGIVGDYKYSANITVRAGSNINLGVLVYE 432 (633)
Q Consensus 374 ~yqywt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~~~~~VtV~aG~t~~l~~l~~~ 432 (633)
+....+.||++|.|.+ +++||+|+|++...|+. ..+..|+|.+++++.+ ++.+.
T Consensus 325 ~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~---~~~~~v~v~~~~~~~~-~~~L~ 378 (380)
T 1h8l_A 325 DINHPVTTYKDGDYWR-LLVQGTYKVTASARGYD---PVTKTVEVDSKGGVQV-NFTLS 378 (380)
T ss_dssp TEEEEEECCTTSEEEE-CCCSEEEEEEEECTTBC---CEEEEEEECSSCEEEC-CEEEC
T ss_pred cCcceeEECCCEEEEE-ecCCCcEEEEEEEcCcc---ceEEEEEEcCCCeEEE-EEEec
Confidence 2335688999999999 59999999999998876 4445699999987666 46665
No 4
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=97.60 E-value=6.7e-05 Score=81.91 Aligned_cols=90 Identities=18% Similarity=0.123 Sum_probs=61.9
Q ss_pred eEEEEEEEEccccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceEeCcccCCceEEEEEECceeeeee
Q 006741 332 GGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSIKNVRQGDYNLYAWIPGIVGDYK 411 (633)
Q Consensus 332 GtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~ 411 (633)
..|+|+|+-.+| .|..+|.|.+.... ...+.||++|.|.+. ++||+|+|++.+.|+.. .
T Consensus 337 ~gv~G~V~D~~G------~pi~gA~V~v~g~~------------~~~~~Td~~G~y~~~-l~pG~Y~l~vs~~Gy~~--~ 395 (435)
T 3mn8_A 337 IGIKGLVTDASG------FPIADANVYVAGLE------------EKPMRTSKRGEYWRL-LTPGLYSVHASAFGYQT--S 395 (435)
T ss_dssp SSEEEEEECSSS------CBCTTCEEEETTCT------------TSCEECCTTCEEEEC-CCSEEEEEEEEBTTBCC--C
T ss_pred ceeEEEEECCCC------CccCceEEEEeccc------------ccceEeCCCCeEEEe-cCCCcEEEEEEEccccc--c
Confidence 459999976655 88999999995320 245789999999885 99999999999988832 4
Q ss_pred eeeeEEEecCc--eeeecceEecCCCCCCceeEEec
Q 006741 412 YSANITVRAGS--NINLGVLVYEPPRKGPTLWEIGI 445 (633)
Q Consensus 412 ~~~~VtV~aG~--t~~l~~l~~~~p~~g~~LweIGi 445 (633)
....|+|.+++ .+.+ ++++++ ...+|-||-+
T Consensus 396 ~~~~v~v~~~~~~~~~~-~~~L~~--~~~~L~~v~~ 428 (435)
T 3mn8_A 396 APQQVRVTNDNQEALRL-DFKLAP--VETNFDGISS 428 (435)
T ss_dssp CCEEEEECCCSSSCEEC-CEECCB--C---------
T ss_pred eEEEEEEecCCcceeEE-EEEEee--cCCCCCeeEe
Confidence 45569999877 3356 588885 6778888875
No 5
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=97.55 E-value=8.2e-05 Score=80.93 Aligned_cols=92 Identities=15% Similarity=0.068 Sum_probs=62.6
Q ss_pred ceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceEeCcccCCceEEEEEECceeeee
Q 006741 331 RGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSIKNVRQGDYNLYAWIPGIVGDY 410 (633)
Q Consensus 331 RGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~ 410 (633)
.++|+|+|+-.++ .|..+|.|.+.... .+ .-+.||.+|.|.+ .+.||+|+|.+.+.|+.
T Consensus 295 ~~~I~G~V~D~~g------~pi~gA~V~v~g~~---------~~--~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--- 353 (426)
T 1uwy_A 295 HLGVKGQVFDQNG------NPLPNVIVEVQDRK---------HI--CPYRTNKYGEYYL-LLLPGSYIINVTVPGHD--- 353 (426)
T ss_dssp GCSEEEEEECTTS------CBCCSCEEEETTCC---------CS--SCCBCCTTCEEEE-CCCSEEEEEEEECSSSC---
T ss_pred cceeEEEEECCCC------CccCceEEEEEecc---------cc--ceeEeCCCCEEEe-ccCCeeEEEEEEEcCcc---
Confidence 5789999965555 78899999985432 11 1257999999999 59999999999997765
Q ss_pred eeeeeEEEecCc----eeeecceEecCCCCCCceeEEecc
Q 006741 411 KYSANITVRAGS----NINLGVLVYEPPRKGPTLWEIGIP 446 (633)
Q Consensus 411 ~~~~~VtV~aG~----t~~l~~l~~~~p~~g~~LweIGi~ 446 (633)
..+..|+|.+++ ++.+ ++++.+ ...+|-||.+-
T Consensus 354 ~~~~~v~v~~~~~~~~~~~~-~~~L~~--~~~~l~evv~~ 390 (426)
T 1uwy_A 354 PHITKVIIPEKSQNFSALKK-DILLPF--QGQLDSIPVSN 390 (426)
T ss_dssp CEEEEEEECSSCSSSSCEEC-CEECSS--CC---------
T ss_pred cEEEEEEEeCCCccccceEE-EEEEec--CCccccceeec
Confidence 445568898876 4555 578874 67889988774
No 6
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius}
Probab=96.26 E-value=0.0037 Score=70.18 Aligned_cols=82 Identities=17% Similarity=0.325 Sum_probs=57.4
Q ss_pred EEEEecCCCC-CccEEEEEEecccCC--CceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeee
Q 006741 526 IIFELKHLNN-NGHYTLQLALASATD--SDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRG 602 (633)
Q Consensus 526 I~F~L~~~~~-~~~~tLriala~a~~--~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 602 (633)
+.|++..++. .+.++|||++.-..+ ..+.|.|||..+..|.=-. +.+.. -|. -+.-..+|+||+++|+++
T Consensus 491 ~~F~i~~v~tg~g~A~LRvg~gR~~g~s~~p~V~vNG~~v~vP~~w~---g~dq~-~r~---~fFg~ieipVp~~lL~~~ 563 (591)
T 4aw7_A 491 LSFPFTGIESGSGRASLRMSIGRPVSASKKPVVKINGTAVSVPDNWK---GYGQS-NRN---IFFGMIEVPFDIQLLKNG 563 (591)
T ss_dssp EEEEEEEECCCSEEEEEEEEEEEETTSCSCCEEEETTEEECCCSCCS---SCCCT-TSS---EEEEEEEEEECGGGCCSE
T ss_pred eEEEEecccCCCceEEEEEEcCcCCCcCCCCEEEECCEEeccCcccc---ccccc-Chh---hceEEEEecCCHHHHhcC
Confidence 3344443332 378999999998743 5689999998877554211 22221 233 345678999999999989
Q ss_pred ecEEEEEEeeCC
Q 006741 603 RNTIYLTQSRSR 614 (633)
Q Consensus 603 ~NtI~lt~~~g~ 614 (633)
+|+|.++.+.+.
T Consensus 564 ~NtI~VtFPD~G 575 (591)
T 4aw7_A 564 DNNVDITFSDGG 575 (591)
T ss_dssp EEEEEEECSSCC
T ss_pred CCeEEEEecCCC
Confidence 999999998754
No 7
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=96.02 E-value=0.02 Score=54.83 Aligned_cols=95 Identities=15% Similarity=0.205 Sum_probs=60.6
Q ss_pred CCceEEEEEEEEccccccccccccCccEEEecCCCC-------------CCc---------ccccCccceeEEEeCCccc
Q 006741 329 NQRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGG-------------VGS---------WERDSKGYQFWTKANKRGY 386 (633)
Q Consensus 329 ~qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~-------------~g~---------~q~~~k~yqywt~td~~G~ 386 (633)
.+.++|+|++.+... +....+..+..|.|.+... .|- |.-+-..|.--|.+|++|+
T Consensus 41 ~G~~tI~G~a~~~~~--~G~~~~~~G~~V~L~P~T~Ys~er~~~yG~~~~g~~p~~~~~~~~dp~~~~y~r~t~~D~~G~ 118 (170)
T 1xpn_A 41 VGGGVINGDLYLTSA--SGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATYVREATTDQNGR 118 (170)
T ss_dssp CCCCCEEEEECEECT--TSCEECCTTEEEEEEECCTHHHHHHHHSSSEEGGGCCSSSCCCCCCTTHHHHCEEEEECSSCE
T ss_pred CCCceEEEEEEEEcC--CCCEEecCCCEEEEEeCCHHHHHHHHHhCccccccccccccccccCchhhcceeEEEecCCCc
Confidence 356899999887652 1123456667778853210 011 1112244666789999999
Q ss_pred eEeCcccCCceEEEEEE---Cc------eeeeeeeeeeEEEecCceeee
Q 006741 387 FSIKNVRQGDYNLYAWI---PG------IVGDYKYSANITVRAGSNINL 426 (633)
Q Consensus 387 FtI~nVrpGtY~L~a~~---~G------~~G~~~~~~~VtV~aG~t~~l 426 (633)
|++.+|+||+|=|.+.+ .. -+|.... ..|+|..|++.++
T Consensus 119 F~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~l~-k~Vtv~~Ge~~~v 166 (170)
T 1xpn_A 119 FDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVT-KLVTVSGSQPQKV 166 (170)
T ss_dssp EEECSCCSEEEEEEEEEEEEEEETTEEEEEEEEEE-EEEEECCSSCEEE
T ss_pred EEecCCCCccEEEEEEEeccCccccccccccceEE-EEEEeCCCcEEEE
Confidence 99999999999999852 11 1233333 3489998887654
No 8
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=95.97 E-value=0.056 Score=49.61 Aligned_cols=90 Identities=17% Similarity=0.260 Sum_probs=54.2
Q ss_pred EEEEecCCCCCccEEEEEEeccc--CCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeeee
Q 006741 526 IIFELKHLNNNGHYTLQLALASA--TDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGR 603 (633)
Q Consensus 526 I~F~L~~~~~~~~~tLriala~a--~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 603 (633)
|.|++.. +..|.|+|+|-.|.. ....+.|.|||..... .+..++... ++ -.|...++.|+ |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~ryang~~~~r~~~l~VNG~~~g~---~~v~~p~Tg-----~W-~~w~t~~~~v~---L~aG~ 107 (139)
T 2w87_A 41 VVWAIDA-TSSGRRTLTIRYANGGTANRNGSLVINGGSNGN---YTVSLPTTG-----AW-TTWQTATIDVD---LVQGN 107 (139)
T ss_dssp EEEEEEE-SSCEEEEEEEEEECCSSSCCCEEEEETTTTTCE---EEECCCCCS-----ST-TCCEEEEEEEE---ECSEE
T ss_pred EEEEEEC-CCCcEEEEEEEEECCCCCCceEEEEECCEEcce---eEEEecCCC-----CC-CccEEEEEEEE---ECCCc
Confidence 4455432 345899999999875 3467999999975410 000111110 00 01333345554 89999
Q ss_pred cEEEEEEeeCCCCCceEEEEEEEEecCC
Q 006741 604 NTIYLTQSRSRSPFQGVLYDYIRLEGPP 631 (633)
Q Consensus 604 NtI~lt~~~g~s~~~~vmyD~IrLe~p~ 631 (633)
|+|+|.-..+. -++-.|+|+|+.+.
T Consensus 108 ntI~l~~~~~~---g~~niD~i~v~~~~ 132 (139)
T 2w87_A 108 NIVQLSATTAE---GLPNIDSLSVVGGT 132 (139)
T ss_dssp EEEEEEESSTT---CCCEEEEEEEESSS
T ss_pred eEEEEEEcCCC---CCEEEEEEEEecCC
Confidence 99999865322 14778999998653
No 9
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=95.82 E-value=0.061 Score=50.53 Aligned_cols=95 Identities=16% Similarity=0.211 Sum_probs=63.0
Q ss_pred CCceEEEEEEEEccccccccccccCccEEEecCCCC-------------CCc--------cc-ccCccceeEEEeCCccc
Q 006741 329 NQRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGG-------------VGS--------WE-RDSKGYQFWTKANKRGY 386 (633)
Q Consensus 329 ~qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~-------------~g~--------~q-~~~k~yqywt~td~~G~ 386 (633)
.+.++|+|++.+... +.......+..|.|-+... -.. +. .+-..|..-|.+|++|+
T Consensus 21 ~G~~tI~G~a~~r~~--~G~~~~c~g~~V~L~P~T~Y~~e~~~~~g~~~~~~r~~~~~~~~~d~~~~~y~r~t~cD~~G~ 98 (150)
T 3qec_A 21 VGEGVINGDLYLTSA--SGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATYVREATTDQNGR 98 (150)
T ss_dssp CCCEEEEEEEEEECT--TSCEEECCSCEEEEEECCHHHHHHHHHHTTCBSTTCCTTCCCCCCCTTSGGGCEEEECCTTSE
T ss_pred CCcceEEEEEEEECC--CCCEecCCCCEEEEEeCCHHHHHHHHHhcCcccccccCCCCCCCCChhHhcceeEEEeCCCCc
Confidence 467999999988753 1122456677788853210 000 11 23466778899999999
Q ss_pred eEeCcccCCceEEEEEEC------c---eeeeeeeeeeEEEecCceeee
Q 006741 387 FSIKNVRQGDYNLYAWIP------G---IVGDYKYSANITVRAGSNINL 426 (633)
Q Consensus 387 FtI~nVrpGtY~L~a~~~------G---~~G~~~~~~~VtV~aG~t~~l 426 (633)
|++++|+||+|-|.+.+. + ..|..... .|+|+.|++.++
T Consensus 99 F~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~lmk-~V~v~ggq~~~v 146 (150)
T 3qec_A 99 FDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTK-LVTVSGSQPQKV 146 (150)
T ss_dssp EEEEEECSEEEEEEEEEEEEEESSSSEEEEEEEEEE-EEEESSSCCCCE
T ss_pred EEECCCCCccEEEEEEEEeccCCCCCcccccceEEE-EEEEcCCcEEEE
Confidence 999999999999988742 1 23444444 399999888654
No 10
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=95.81 E-value=0.03 Score=52.65 Aligned_cols=87 Identities=23% Similarity=0.292 Sum_probs=53.0
Q ss_pred EEEE-ecCCCCCccEEEEEEecccC------------CCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEE
Q 006741 526 IIFE-LKHLNNNGHYTLQLALASAT------------DSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSI 592 (633)
Q Consensus 526 I~F~-L~~~~~~~~~tLriala~a~------------~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~ 592 (633)
|.|+ +.. +..|.|+|+|-.+... ...+.|.|||.... ...++.... +. .+....+
T Consensus 49 vtf~~V~~-~~aG~Y~l~irYang~~~~~~~y~~~~~~r~~~v~VNG~~~~-----~v~fp~Tg~-----W~-~~~~~tv 116 (156)
T 2wz8_A 49 LQFNNVYV-PQAGTYRMVVQFANAEVFGQHSYNNNVVDRYCSISVNGGPEK-----GHYFFNTRG-----WN-TYRTDII 116 (156)
T ss_dssp EEEEEEEE-SSCEEEEEEEEEECCCBC-------CBCCEEEEEEETTCCCE-----EEEECCCSS-----TT-CCEEEEE
T ss_pred EEEEEEec-CCCcEEEEEEEEECCCcccccccCCccCcceEEEEECCceee-----EEEeCCCCC-----CC-cceEEEE
Confidence 4444 433 3458999999988653 35699999997532 111222111 11 2345566
Q ss_pred EeeCCceeeeecEEEEEEeeCCCCCceEEEEEEEEec
Q 006741 593 DVPSVLLNRGRNTIYLTQSRSRSPFQGVLYDYIRLEG 629 (633)
Q Consensus 593 ~ipa~~L~~G~NtI~lt~~~g~s~~~~vmyD~IrLe~ 629 (633)
.|+ |++|.|+|+|+-.. ...| +.=.|+|.|..
T Consensus 117 ~V~---L~aG~NtI~~~~~~-~~~~-~pdiD~i~v~~ 148 (156)
T 2wz8_A 117 DVY---LNAGNNTIRFYNGT-SGSY-APNIDKIAIAA 148 (156)
T ss_dssp EEE---ECSEEEEEEEECCS-TTCB-CCEEEEEEEEC
T ss_pred EEE---ECCCceEEEEEecC-CCCC-CcEEEEEEEec
Confidence 666 99999999998541 1223 45678888863
No 11
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=95.23 E-value=0.043 Score=50.83 Aligned_cols=87 Identities=21% Similarity=0.340 Sum_probs=53.0
Q ss_pred EEEEecCCCCCccEEEEEEeccc--CCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeeee
Q 006741 526 IIFELKHLNNNGHYTLQLALASA--TDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGR 603 (633)
Q Consensus 526 I~F~L~~~~~~~~~tLriala~a--~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 603 (633)
|.|++.. +..|.|+|.|-.|.. ....+.|.|||..... ..++... ++. .|...++.|+ |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~ryang~~~~r~~~l~VNG~~~~~-----v~~p~Tg-----~W~-~w~t~~~~v~---L~aG~ 105 (145)
T 2w3j_A 41 IVWSLSA-ASAKTYTAQIRFGNGGTSARRATVVVNDSQIKT-----LDFPTNS-----NWT-QWQTVNVDIP---LKAGT 105 (145)
T ss_dssp EEEEEEE-SSCEEEEEEEEEECCSSSCCCEEEEETTEEEEE-----ECCCCCS-----CTT-SCEEEEEEEE---ECSEE
T ss_pred EEEEEEC-CCCeEEEEEEEEECCCCCCeEEEEEECCeEeeE-----EEecCCC-----CCC-eeEEEEEEEE---ECCCc
Confidence 4455432 345899999999853 4567999999964321 1122111 010 1233344444 89999
Q ss_pred cEEEEEEeeCCCCCceEEEEEEEEecC
Q 006741 604 NTIYLTQSRSRSPFQGVLYDYIRLEGP 630 (633)
Q Consensus 604 NtI~lt~~~g~s~~~~vmyD~IrLe~p 630 (633)
|+|+|....+. .++-.|+|+|+..
T Consensus 106 ntI~l~~~~~~---g~~niD~i~v~~~ 129 (145)
T 2w3j_A 106 NSIKLVAETAD---GLANIDSIRVTGN 129 (145)
T ss_dssp EEEEEEECSTT---CCCEEEEEEECST
T ss_pred eEEEEEEecCc---CCEEEEEEEEEcC
Confidence 99999964332 2477899999754
No 12
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=94.85 E-value=0.11 Score=47.73 Aligned_cols=87 Identities=21% Similarity=0.262 Sum_probs=52.0
Q ss_pred EEEEecCCCCCccEEEEEEeccc--CCCceEEEEcCCCC-CCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeee
Q 006741 526 IIFELKHLNNNGHYTLQLALASA--TDSDLHVRFNNPNA-DPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRG 602 (633)
Q Consensus 526 I~F~L~~~~~~~~~tLriala~a--~~~~~~V~vNg~~~-~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 602 (633)
|.|++.. +..|.|+|+|-.+.. ....+.|.|||... .. ..++.... +. .+....+.|+ |++|
T Consensus 42 v~~~V~v-~~aG~Y~l~~ryan~~~~~~~~~l~VNG~~~~~~-----v~~p~Tg~-----w~-~w~~~~~~v~---L~aG 106 (144)
T 2w47_A 42 IEWNVNA-PSSGSYALIFRYANGTTANRPMRITVNGNIVKPS-----MDFVSTGA-----WT-TWNEAGIVAN---LNQG 106 (144)
T ss_dssp EEEEEEE-SSSEEEEEEEEEECCSSSCCCEEEEETTEEEEEE-----ECCCCCSS-----TT-CCEEEEEEEE---ECSE
T ss_pred EEEEEEC-CCCcEEEEEEEEECCCCCCeEEEEEECCeEeeeE-----EEecCCCC-----CC-eeEEEEEEEE---ECCC
Confidence 4455432 345889999998875 35679999999642 10 01111110 00 1122233343 8899
Q ss_pred ecEEEEEEeeCCCCCceEEEEEEEEecC
Q 006741 603 RNTIYLTQSRSRSPFQGVLYDYIRLEGP 630 (633)
Q Consensus 603 ~NtI~lt~~~g~s~~~~vmyD~IrLe~p 630 (633)
.|+|+|....+ ..++-.|+|+|+..
T Consensus 107 ~ntI~l~~~~~---~g~~niD~i~v~~~ 131 (144)
T 2w47_A 107 NNVIRATAIAS---DGGPNVDYLKVFSA 131 (144)
T ss_dssp EEEEEEEECST---TCCCEEEEEEEEEC
T ss_pred ccEEEEEEeCC---CCCEEEeEEEEEeC
Confidence 99999986432 22588999999854
No 13
>2bgo_A Endo-B1,4-mannanase 5C; carbohydrate binding protein, carbohydrate binding module; NMR {Cellvibrio japonicus} PDB: 2bgp_A
Probab=93.42 E-value=0.31 Score=45.16 Aligned_cols=87 Identities=14% Similarity=0.169 Sum_probs=54.8
Q ss_pred EEEEEEecCCCCCccEEEEEEeccc-CCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeee
Q 006741 524 WRIIFELKHLNNNGHYTLQLALASA-TDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRG 602 (633)
Q Consensus 524 w~I~F~L~~~~~~~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 602 (633)
=.|.|+++ ++..|.|.|.|--+.. ...+-.+.|||. ... -.++.... .+.+. .+ -.|.+|
T Consensus 36 dsVtf~Vd-VP~tG~YdLsI~Ya~~~G~k~n~L~VNG~-~~~-----V~fP~tt~---------~~~~~-~~--V~L~aG 96 (140)
T 2bgo_A 36 SAVIWNVD-VPVTGEYRINLTWSSPYSSKVNTLVMDGT-ALS-----YAFAEATV---------PVTYV-QT--KTLSAG 96 (140)
T ss_dssp CEEEEEEC-CCSSEEEEEEEEECCCSSEEEEEEEETTE-EEE-----EEEESCCS---------CEEEE-EE--EEECSS
T ss_pred CEEEEEEe-cCCCcEEEEEEEeccCCCCceEEEEECCc-eeE-----EEECCcCC---------cEEEE-EE--EEecCC
Confidence 34556664 3456899999999764 345678999986 321 11221110 11111 11 678899
Q ss_pred ecEEEEEEeeCCCCCceEEEEEEEEecCC
Q 006741 603 RNTIYLTQSRSRSPFQGVLYDYIRLEGPP 631 (633)
Q Consensus 603 ~NtI~lt~~~g~s~~~~vmyD~IrLe~p~ 631 (633)
.|+|.|.-. ++.|-.+..|+|+|+...
T Consensus 97 ~NtI~i~~~--~g~WG~~~iD~I~l~~a~ 123 (140)
T 2bgo_A 97 NHSFGVRVG--SSDWGYMNVHSLKLELLG 123 (140)
T ss_dssp CEEEEEECC--SSSCCCCEEEEEEEEECC
T ss_pred ccEEEEEec--CCCceeEEEEEEEEEcCC
Confidence 999999854 334667889999999654
No 14
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=93.34 E-value=0.35 Score=43.10 Aligned_cols=85 Identities=19% Similarity=0.255 Sum_probs=49.2
Q ss_pred EEEEecCCCCCccEEEEEEeccc--CCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeeee
Q 006741 526 IIFELKHLNNNGHYTLQLALASA--TDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGR 603 (633)
Q Consensus 526 I~F~L~~~~~~~~~tLriala~a--~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 603 (633)
|.|++.. +..|.|+|+|-.|.. ....+.|.|||..... ...++... ++. .+....+.|. |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~rya~~~~~~~~~~l~VnG~~~~~----~v~~p~tg-----~W~-~w~~~~~~v~---L~aG~ 106 (127)
T 2vzp_A 41 VEWTVTV-PSAGTYDVVVRYANGTTTSRPLDFSVNGSISAS----GVAFGSTG-----TWP-AWTTKTVRVT---LAAGV 106 (127)
T ss_dssp EEEEEEE-SSSEEEEEEEEEECCSSSCCCEEEEETTEEEEE----EECCCCCS-----STT-CCEEEEEEEE---ECSEE
T ss_pred EEEEEEc-CCCCEEEEEEEEEcCCCCCeEEEEEECCEEeee----EEEecCCC-----CCC-ceEEEEEEEE---ECCCc
Confidence 4444432 345899999999875 4578999999964210 01111110 010 1222233443 89999
Q ss_pred cEEEEEEeeCCCCCceEEEEEEEE
Q 006741 604 NTIYLTQSRSRSPFQGVLYDYIRL 627 (633)
Q Consensus 604 NtI~lt~~~g~s~~~~vmyD~IrL 627 (633)
|+|+|....+. -++-.|+|.+
T Consensus 107 ntI~l~~~~~~---~~~niD~i~v 127 (127)
T 2vzp_A 107 NKIKAVATTAN---GGPNVDKITL 127 (127)
T ss_dssp EEEEEEECSTT---CCCEEEEEEC
T ss_pred eEEEEEEeCCC---CCeEEEEEEC
Confidence 99999975322 1467788764
No 15
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=93.23 E-value=0.15 Score=53.24 Aligned_cols=64 Identities=17% Similarity=0.199 Sum_probs=46.2
Q ss_pred CceEEEEEEEEccccc--cccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceEeCcccCCc--eEEEEEECc
Q 006741 330 QRGGVFGQLRVHDRYI--SNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSIKNVRQGD--YNLYAWIPG 405 (633)
Q Consensus 330 qRGtVsG~l~~sd~~~--~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI~nVrpGt--Y~L~a~~~G 405 (633)
.-++|+|-|.. +-+- ........++.|-+..++ .-+.+|++|+|+|.+|++|+ |+|.+..+|
T Consensus 156 ~~~~vsGYi~~-~~~~~~~~~~~~~~G~~V~i~gt~-------------~sa~tD~~G~f~I~~vp~~~~~ytl~i~~~g 221 (321)
T 3kcp_A 156 EGYKVSGYILP-DFSFDATVAPLVKAGFKVEIVGTE-------------LYAVTDANGYFEITGVPANASGYTLKISRAT 221 (321)
T ss_dssp SSEEEEEEEEE-SSCCCTTTHHHHHSCCEEEETTSS-------------CEEECCTTSEEEEEEECCEEEEEEEEEECTE
T ss_pred CCceEEEEEcc-ccccccccchhccCCcEEEEEecc-------------ceeEECCCceEEEeccCCCCccEEEEEeecC
Confidence 46899999854 2100 011133456778876554 57889999999999999999 999999988
Q ss_pred ee
Q 006741 406 IV 407 (633)
Q Consensus 406 ~~ 407 (633)
+.
T Consensus 222 ~l 223 (321)
T 3kcp_A 222 YL 223 (321)
T ss_dssp EC
T ss_pred ce
Confidence 66
No 16
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=89.39 E-value=0.75 Score=47.98 Aligned_cols=63 Identities=10% Similarity=0.087 Sum_probs=45.6
Q ss_pred CceEEEEEEEEccccccccccccCccEEEecCCCCCCccccc---Ccccee--EEEeCCccceEeCcccCCceE
Q 006741 330 QRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERD---SKGYQF--WTKANKRGYFSIKNVRQGDYN 398 (633)
Q Consensus 330 qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~---~k~yqy--wt~td~~G~FtI~nVrpGtY~ 398 (633)
++-.|+|+|+-.++ .|..+|.|=+......|....+ ..+... ...||++|.|.|.-|+||.|.
T Consensus 135 ~~l~v~G~V~D~~G------~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~ 202 (312)
T 2xsu_A 135 DTLIIEGTVTDTEG------NIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYG 202 (312)
T ss_dssp CEEEEEEEEEETTS------CBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred eeEEEEEEEECCCC------CCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCccc
Confidence 47899999987766 8999999999655544422211 111211 367899999999999999997
No 17
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=88.67 E-value=0.51 Score=47.90 Aligned_cols=65 Identities=11% Similarity=0.231 Sum_probs=46.1
Q ss_pred CCceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccC---cccee--EEEeCCccceEeCcccCCceEE
Q 006741 329 NQRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDS---KGYQF--WTKANKRGYFSIKNVRQGDYNL 399 (633)
Q Consensus 329 ~qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~---k~yqy--wt~td~~G~FtI~nVrpGtY~L 399 (633)
.++-.|.|+|+-.++ .|..+|.|=+.+....|....+. .+... ...||++|.|+|.-|+||.|.+
T Consensus 100 G~~l~l~G~V~D~~G------~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~Y~~ 169 (254)
T 2boy_A 100 GDTLIFRGEVVDQEG------APLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYEI 169 (254)
T ss_dssp SCEEEEEEEEECTTS------CBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCCC------CCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCccccC
Confidence 567899999976665 89999999995555444222110 11111 2678999999999999999964
No 18
>1uxz_A Cellulase B; carbohydrate binding module, CBM6, mixted BETA1, 3-1, 4 linked glucan; 1.4A {Cellvibrio mixtus} SCOP: b.18.1.10 PDB: 1uy0_A* 1uyx_A* 1uyy_A* 1uyz_A* 1uz0_A*
Probab=88.26 E-value=1.6 Score=39.35 Aligned_cols=77 Identities=19% Similarity=0.277 Sum_probs=48.5
Q ss_pred CccEEEEEEeccc-CCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeeeecEEEEEEeeCC
Q 006741 536 NGHYTLQLALASA-TDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGRNTIYLTQSRSR 614 (633)
Q Consensus 536 ~~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~g~ 614 (633)
.|.|+|.+-.|+. ++++++|++++ ... ...+-.++... +.. .|...+.+|. |.+|.|+|+|....|
T Consensus 52 ~G~y~~~~rvas~~~gg~i~v~~~~-~g~--~~g~~~vp~Tg-----gw~-~w~t~~~~v~---l~~G~h~l~l~~~~g- 118 (131)
T 1uxz_A 52 SGSYLIEYRVASQNGGGSLTFEEAG-GAP--VHGTIAIPATG-----GWQ-TWTTIQHTVN---LSAGSHQFGIKANAG- 118 (131)
T ss_dssp SEEEEEEEEEEESSCCEEEEEEETT-SCS--EEEEEEECCCS-----EEE-EEEEEEEEEE---ECSEEECEEEEEEEC-
T ss_pred CCceEEEEEEECCCCCcEEEEEECC-CCC--EeeEEEeCCCC-----CCc-ccEEEEEEEE---eCCCeEEEEEEEcCC-
Confidence 4778888777775 46899999986 211 11121222221 111 2444444553 679999999998765
Q ss_pred CCCceEEEEEEEEec
Q 006741 615 SPFQGVLYDYIRLEG 629 (633)
Q Consensus 615 s~~~~vmyD~IrLe~ 629 (633)
++-.|.|+|+.
T Consensus 119 ----~~nld~~~f~~ 129 (131)
T 1uxz_A 119 ----GWNLNWIRINK 129 (131)
T ss_dssp ----CCEEEEEEEEE
T ss_pred ----CEEEEEEEEEE
Confidence 58889998873
No 19
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=88.14 E-value=0.89 Score=47.44 Aligned_cols=64 Identities=13% Similarity=0.112 Sum_probs=46.5
Q ss_pred CCceEEEEEEEEccccccccccccCccEEEecCCCCCCccccc---Ccccee--EEEeCCccceEeCcccCCceE
Q 006741 329 NQRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERD---SKGYQF--WTKANKRGYFSIKNVRQGDYN 398 (633)
Q Consensus 329 ~qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~---~k~yqy--wt~td~~G~FtI~nVrpGtY~ 398 (633)
.++=.|.|+|+-.++ .|..+|.|=+......|....+ ..+... ...||++|.|.|.-|+||-|.
T Consensus 130 G~~l~v~G~V~D~~G------~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~ 198 (311)
T 2azq_A 130 GVVMFLQGQVFDANG------KPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYG 198 (311)
T ss_dssp CCEEEEEEEEECSSS------CBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEE
T ss_pred CcEEEEEEEEEcCCC------CCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcC
Confidence 467899999976666 8999999999665555433211 112222 366899999999999999997
No 20
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=83.57 E-value=2.3 Score=42.82 Aligned_cols=65 Identities=17% Similarity=0.285 Sum_probs=47.4
Q ss_pred CCceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccC--------ccceeE--EEeCCccceEeCcccCCceE
Q 006741 329 NQRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDS--------KGYQFW--TKANKRGYFSIKNVRQGDYN 398 (633)
Q Consensus 329 ~qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~--------k~yqyw--t~td~~G~FtI~nVrpGtY~ 398 (633)
.++=.|.|+|+-.++ .|..+|.|=+.+....|....+. .+...+ ..||++|.|+|.-|+||-|.
T Consensus 76 G~~i~v~G~V~D~~G------~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp 149 (241)
T 2bum_B 76 GERVIVHGYVRDQFG------RPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYP 149 (241)
T ss_dssp SCEEEEEEEEEETTS------CBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEE
T ss_pred CcEEEEEEEEECCCC------CCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCccc
Confidence 457789999987666 89999999997666555332211 122222 56799999999999999997
Q ss_pred E
Q 006741 399 L 399 (633)
Q Consensus 399 L 399 (633)
.
T Consensus 150 ~ 150 (241)
T 2bum_B 150 W 150 (241)
T ss_dssp E
T ss_pred c
Confidence 5
No 21
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=83.50 E-value=1.5 Score=44.67 Aligned_cols=64 Identities=11% Similarity=0.123 Sum_probs=45.8
Q ss_pred CceEEEEEEEEccccccccccccCccEEEecCCCCCCcccc--c-Ccccee--EEEeCCccceEeCcccCCceEE
Q 006741 330 QRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWER--D-SKGYQF--WTKANKRGYFSIKNVRQGDYNL 399 (633)
Q Consensus 330 qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~--~-~k~yqy--wt~td~~G~FtI~nVrpGtY~L 399 (633)
++=.|+|+|+-.++ .|..+|.|=+.+....|-... + ...... ...||++|.|.+.-|+||-|-+
T Consensus 98 ~pl~v~G~V~D~~G------~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~Ypi 166 (260)
T 3th1_A 98 KPLIIRGTVRSDTG------ELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVPYQI 166 (260)
T ss_dssp CEEEEEEEEEETTS------CBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CEEEEEEEEECCCC------CCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCCCCC
Confidence 46789999987776 899999999966555553221 1 111222 3668999999999999999853
No 22
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=83.08 E-value=1.9 Score=43.26 Aligned_cols=67 Identities=13% Similarity=0.176 Sum_probs=48.7
Q ss_pred CCCCceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccC--------ccceeE--EEeCCccceEeCcccCCc
Q 006741 327 KRNQRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDS--------KGYQFW--TKANKRGYFSIKNVRQGD 396 (633)
Q Consensus 327 ~~~qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~--------k~yqyw--t~td~~G~FtI~nVrpGt 396 (633)
+..++=.|.|+|+-.++ .|..+|.|=+.+....|....+. .++..+ ..||++|.|+|.-|+||-
T Consensus 73 ~~G~~i~l~G~V~D~~G------~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~ 146 (238)
T 3t63_M 73 PIGERIIVAGRVVDQYG------KPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGP 146 (238)
T ss_dssp CSSCEEEEEEEEEETTS------CBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCC
T ss_pred CCCcEEEEEEEEECCCC------CCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcC
Confidence 34567899999987666 89999999996665555332111 122233 578999999999999999
Q ss_pred eEE
Q 006741 397 YNL 399 (633)
Q Consensus 397 Y~L 399 (633)
|..
T Consensus 147 Yp~ 149 (238)
T 3t63_M 147 APW 149 (238)
T ss_dssp EEE
T ss_pred ccC
Confidence 975
No 23
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=82.87 E-value=1.9 Score=44.65 Aligned_cols=65 Identities=11% Similarity=0.052 Sum_probs=47.7
Q ss_pred CCceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccCc--cceeE--EEeCCccceEeCcccCCceEE
Q 006741 329 NQRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSK--GYQFW--TKANKRGYFSIKNVRQGDYNL 399 (633)
Q Consensus 329 ~qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k--~yqyw--t~td~~G~FtI~nVrpGtY~L 399 (633)
.++=.|.|+|+-.++ .|..+|.|=+.+....|....+.. +..++ ..||++|.|.|.-|+||-|.+
T Consensus 131 G~~l~v~G~V~D~~G------~Pv~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 199 (293)
T 1tmx_A 131 GEPCWVEGTVTDTDG------NPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPI 199 (293)
T ss_dssp SCEEEEEEEEEETTS------CBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCCC------CCCCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEEEECCCcccC
Confidence 457899999987766 899999999966655553322111 23344 567999999999999999964
No 24
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=82.84 E-value=4.7 Score=44.07 Aligned_cols=78 Identities=21% Similarity=0.309 Sum_probs=51.1
Q ss_pred CccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeeeecEEEEEEeeCCC
Q 006741 536 NGHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGRNTIYLTQSRSRS 615 (633)
Q Consensus 536 ~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~g~s 615 (633)
.|.|+|.+-.|+.+++.++|+||+.+.. .+-.++..- +. -.|...+.+|. |.+|.|+|+|+...|
T Consensus 407 ~G~y~~~~rvas~~gg~i~v~~d~~~~~----g~~~vp~Tg-----gw-~~w~t~~~~v~---l~~G~~~l~l~~~~g-- 471 (491)
T 2y8k_A 407 PGYYNLSLRVAGISGSRVQVSFGNQDKT----GVWELPATG-----GF-QTWTTATRQVF---LGAGLQKLRINALSG-- 471 (491)
T ss_dssp CEEEEEEEEEEECTTCEEEEEETTEESS----CSEECCCCS-----EE-EEEEEEEEEEE---ECSEEEEEEEEESSS--
T ss_pred CccEEEEEEEEcCCCceEEEEECCccce----eEEEeCCCC-----CC-cccEEEEEEEE---eCCcEEEEEEEEecC--
Confidence 4788887777777788999999996421 011122211 11 12444444553 789999999998766
Q ss_pred CCceEEEEEEEEecCC
Q 006741 616 PFQGVLYDYIRLEGPP 631 (633)
Q Consensus 616 ~~~~vmyD~IrLe~p~ 631 (633)
++-.|.|+|+..+
T Consensus 472 ---~~nld~~~f~~~~ 484 (491)
T 2y8k_A 472 ---GFNLNWIELSPIL 484 (491)
T ss_dssp ---SEEEEEEEEEEC-
T ss_pred ---CEEEEEEEEecCC
Confidence 4899999998643
No 25
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=82.74 E-value=1.2 Score=46.33 Aligned_cols=63 Identities=11% Similarity=0.153 Sum_probs=44.9
Q ss_pred ceEEEEEEEEccccccccccccCccEEEecCCCCCCccccc-----CccceeE--EEeCCccceEeCcccCCceEE
Q 006741 331 RGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERD-----SKGYQFW--TKANKRGYFSIKNVRQGDYNL 399 (633)
Q Consensus 331 RGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~-----~k~yqyw--t~td~~G~FtI~nVrpGtY~L 399 (633)
+=.|.|+|+-.++ .|..+|.|=+......|....+ ..+...+ ..||++|.|.|.-|+||-|.+
T Consensus 133 ~l~l~G~V~D~~G------~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~ 202 (311)
T 1dmh_A 133 TLILHGTIFDADG------KPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGC 202 (311)
T ss_dssp EEEEEEEEECTTS------CBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred eEEEEEEEEcCCC------CCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCcccC
Confidence 5689999976665 8999999999655554433211 1112222 667999999999999999963
No 26
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=82.64 E-value=1.4 Score=43.37 Aligned_cols=64 Identities=17% Similarity=0.244 Sum_probs=45.8
Q ss_pred CCceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccC--------ccceeE--EEe-CCccceEeCcccCCce
Q 006741 329 NQRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDS--------KGYQFW--TKA-NKRGYFSIKNVRQGDY 397 (633)
Q Consensus 329 ~qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~--------k~yqyw--t~t-d~~G~FtI~nVrpGtY 397 (633)
.++=.|.|+|+-.++ .|..+|.|=+......|....+. .+...+ ..| |++|.|++.-|+||-|
T Consensus 50 G~~l~v~G~V~D~~G------~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~y 123 (209)
T 2bum_A 50 GQRIRLEGQVFDGLG------LPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAV 123 (209)
T ss_dssp SCEEEEEECEECTTS------CBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCC
T ss_pred CCEEEEEEEEECCCC------CCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCcc
Confidence 456789999976665 89999999997666555332211 122222 566 9999999999999998
Q ss_pred E
Q 006741 398 N 398 (633)
Q Consensus 398 ~ 398 (633)
.
T Consensus 124 p 124 (209)
T 2bum_A 124 P 124 (209)
T ss_dssp B
T ss_pred c
Confidence 5
No 27
>2cdp_A Beta-agarase 1; carbohydrate-binding module, hydrolase; HET: GAL AAL; 1.59A {Saccharophagus degradans} PDB: 2cdo_A*
Probab=82.31 E-value=2.2 Score=39.90 Aligned_cols=81 Identities=19% Similarity=0.266 Sum_probs=47.0
Q ss_pred CCccEEEEEEeccc-CCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEE-EEEEeeCCceeeeecEEEEEEee
Q 006741 535 NNGHYTLQLALASA-TDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRL-YSIDVPSVLLNRGRNTIYLTQSR 612 (633)
Q Consensus 535 ~~~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~-~~~~ipa~~L~~G~NtI~lt~~~ 612 (633)
..|.|+|.+-.|+. +++.++|+|||.....+.. +-.++. .| |.. .+++...-.|.+|.|+|+|....
T Consensus 77 ~aG~Y~i~~rvas~~~g~~i~l~vdg~~~~~~~g-~~~vp~---------tG-W~~w~t~t~~~v~L~aG~htL~l~~~g 145 (160)
T 2cdp_A 77 QAGNYTISYQAGSGVTGGSIEFLVNENGSWASKT-VTAVPN---------QG-WDNFQPLNGGSVYLSAGTHQVRLHGAG 145 (160)
T ss_dssp SCEEEEEEEEEEBSSSSCEEEEEEECSSSEEEEE-EEECCB---------SC-TTCCEEEEEEEEEECSEEEEEEEEECS
T ss_pred CCcEEEEEEEEEcCCCCceEEEEECCCCCceeee-EEEcCC---------CC-CceeEEeeeeEEEeCCCeEEEEEEEEC
Confidence 35889988888876 5678999999962100000 101111 12 221 12222123467999999999764
Q ss_pred CCCCCceEEEEEEEEe
Q 006741 613 SRSPFQGVLYDYIRLE 628 (633)
Q Consensus 613 g~s~~~~vmyD~IrLe 628 (633)
++ .+ ++-.|.|+|.
T Consensus 146 ~~-~~-~~Nld~~~f~ 159 (160)
T 2cdp_A 146 SN-NW-QWNLDKFTLS 159 (160)
T ss_dssp SS-SB-CCEEEEEEEE
T ss_pred CC-CC-cEEEEEEEEE
Confidence 32 22 4688998885
No 28
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=79.78 E-value=3.2 Score=42.79 Aligned_cols=65 Identities=12% Similarity=0.118 Sum_probs=47.7
Q ss_pred CCceEEEEEEEEccccccccccccCccEEEecCCCCCCccccc---CccceeE--EEeCCccceEeCcccCCceEE
Q 006741 329 NQRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERD---SKGYQFW--TKANKRGYFSIKNVRQGDYNL 399 (633)
Q Consensus 329 ~qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~---~k~yqyw--t~td~~G~FtI~nVrpGtY~L 399 (633)
.++=.|.|+|+-.++ .|..+|.|=+......|....+ ..+...+ ..||++|.|.|.-|+||-|..
T Consensus 127 G~~l~l~G~V~D~~G------~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~ 196 (290)
T 3n9t_A 127 GVPALVYGRVLDVQG------RPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPI 196 (290)
T ss_dssp SCEEEEEEEEEETTS------CBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCeEEEEEEEECCCC------CCCCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEEEeCCCCcCC
Confidence 457899999987666 8999999999666555533311 1122233 578999999999999999974
No 29
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=78.82 E-value=2.2 Score=41.69 Aligned_cols=65 Identities=12% Similarity=0.247 Sum_probs=45.9
Q ss_pred CCceEEEEEEEEccccccccccccCccEEEecCCCCCCccccc---CccceeE--EEeCCc-cceEeCcccCCceEE
Q 006741 329 NQRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERD---SKGYQFW--TKANKR-GYFSIKNVRQGDYNL 399 (633)
Q Consensus 329 ~qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~---~k~yqyw--t~td~~-G~FtI~nVrpGtY~L 399 (633)
.++=.|.|+|+-.++ .|..+|.|=+......|....+ ..+...+ ..||++ |.|++.-|+||-|..
T Consensus 46 G~~l~v~G~V~D~~G------~Pv~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~ 116 (200)
T 3t63_A 46 GEHILLLGQVYDGNG------HLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNN 116 (200)
T ss_dssp SCEEEEEECEECTTS------CBCSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCCC------CCCCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEEEECCcCcCC
Confidence 356789999976665 8999999998655544432211 1122333 568998 999999999999974
No 30
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=78.43 E-value=2.6 Score=43.33 Aligned_cols=63 Identities=17% Similarity=0.183 Sum_probs=44.8
Q ss_pred ceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccC---cccee--EEEeCCccceEeCcccCCceEE
Q 006741 331 RGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDS---KGYQF--WTKANKRGYFSIKNVRQGDYNL 399 (633)
Q Consensus 331 RGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~---k~yqy--wt~td~~G~FtI~nVrpGtY~L 399 (633)
+=.|.|+|+-.++ .|..+|.|=+.+....|....+. .+... ...||++|.|.|.-|+||-|-+
T Consensus 131 pl~l~G~V~D~~G------~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~TI~Pg~Yp~ 198 (280)
T 3hhy_A 131 PLVFSGQVTDLDG------NGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQI 198 (280)
T ss_dssp EEEEEEEEECTTS------CBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEEECCCC------CCCCCcEEEEEecCCCCCCCCCCCCCCCCcceEEEEeCCCceEEEEEECCcCcCC
Confidence 4589999976665 89999999996655554332111 11222 3578999999999999999963
No 31
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=76.93 E-value=3 Score=42.37 Aligned_cols=63 Identities=14% Similarity=0.157 Sum_probs=45.6
Q ss_pred CceEEEEEEEEccccccccccccCccEEEecCCCCCCccccc---Ccc-ceeE--EEeCCccceEeCcccCCceE
Q 006741 330 QRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERD---SKG-YQFW--TKANKRGYFSIKNVRQGDYN 398 (633)
Q Consensus 330 qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~---~k~-yqyw--t~td~~G~FtI~nVrpGtY~ 398 (633)
++=.|+|+|+-.++ .|..+|.|=+.+....|....+ ..+ ...+ ..||++|.|+|.-|+||-|-
T Consensus 102 ~~l~l~G~V~D~~G------~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp 170 (257)
T 3o5u_A 102 DRMRFTGSVRDTSG------TPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYE 170 (257)
T ss_dssp CEEEEEEEEECTTC------CBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEEECCCCEE
T ss_pred CEEEEEEEEECCCC------CCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEEECCCCcC
Confidence 56789999976665 8999999999666555533211 111 2233 56799999999999999995
No 32
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=76.19 E-value=2.7 Score=42.78 Aligned_cols=48 Identities=21% Similarity=0.433 Sum_probs=38.8
Q ss_pred EEeCCccceEeCcccCCceEEEEEECceeeeeeeeeeEEEecCceeeecceEe
Q 006741 379 TKANKRGYFSIKNVRQGDYNLYAWIPGIVGDYKYSANITVRAGSNINLGVLVY 431 (633)
Q Consensus 379 t~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~~~~~VtV~aG~t~~l~~l~~ 431 (633)
+.+|.-|.|-+..+.+|.|+|.+.+.|+ ....++.| .|+.+.||++.+
T Consensus 227 ~~~d~~G~f~~~~l~~G~y~v~v~a~g~----p~~~~~~~-~~~~~~lg~v~l 274 (274)
T 1ti6_B 227 AETNFFGEFKFDALDNGEYTVEIDADGK----SYSDTVVI-DDKSVDLGFIKL 274 (274)
T ss_dssp EECCTTSEEEEEEECSEEEEEEEEETTE----EEEEEEEE-SSSCEEEEEEEC
T ss_pred EeecCcCcEEEeccCCcceEEEEecCCC----CccceeEE-ccCccccceeeC
Confidence 5678999999999999999999998654 44456778 777778987754
No 33
>1w9s_A BH0236 protein, BHCBM6; carbohydrate-binding module, lectin, beta-glucan, carbohydrate binding, glycoside hydrolase; 1.59A {Bacillus halodurans} SCOP: b.18.1.10 PDB: 1w9t_A* 1w9w_A*
Probab=75.66 E-value=16 Score=33.08 Aligned_cols=81 Identities=11% Similarity=0.216 Sum_probs=48.0
Q ss_pred ccEEEEEEeccc-CCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeeeecEEEEEEeeCCC
Q 006741 537 GHYTLQLALASA-TDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGRNTIYLTQSRSRS 615 (633)
Q Consensus 537 ~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~g~s 615 (633)
+.++|.+-+|+. +++.++|++++.+.. +..+-.++...+ --.|...+.+|+ +.+|.+.|+|....+.+
T Consensus 59 G~~~~~~rvas~~~gg~iev~~d~~~G~--~~gt~~v~~Tgg------w~~w~t~~~~v~---~~~G~h~l~l~f~g~~~ 127 (142)
T 1w9s_A 59 DASSIEVRVASDTPGGRIEIRTGSPTGT--LLGDVQVPNTGG------WQQWQTVTGNVQ---IQPGTYDVYLVFKGSPE 127 (142)
T ss_dssp CEEEEEEEEEESSSCEEEEEEESSTTSC--EEEEEEECCCSE------EEEEEEEEEEEE---ECSEEEEEEEEEESCTT
T ss_pred CcEEEEEEEEcCCCCeEEEEEECCCCCe--EEEEEEeCCCCC------CcccEEEEEEEc---cCCcEEEEEEEEECCCC
Confidence 566666666665 468999999986543 111212222211 123555555554 46899999999764311
Q ss_pred CCceEEEEEEEEec
Q 006741 616 PFQGVLYDYIRLEG 629 (633)
Q Consensus 616 ~~~~vmyD~IrLe~ 629 (633)
. .-+-.|.++++.
T Consensus 128 ~-~~~nld~~~f~~ 140 (142)
T 1w9s_A 128 Y-DLMNVNWFVFRA 140 (142)
T ss_dssp S-CCCEEEEEEEEC
T ss_pred c-ceEEEEEEEEEe
Confidence 1 127788888875
No 34
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=73.95 E-value=4.9 Score=43.66 Aligned_cols=66 Identities=23% Similarity=0.269 Sum_probs=45.9
Q ss_pred CceEEEEEEEEc---cccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceEeCcccCCceEEEEEEC
Q 006741 330 QRGGVFGQLRVH---DRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSIKNVRQGDYNLYAWIP 404 (633)
Q Consensus 330 qRGtVsG~l~~s---d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI~nVrpGtY~L~a~~~ 404 (633)
+-++|.|.|-.- ||.......+.+++.|-|..+. |. .---+.||++|.|.|.++.||+|++.+-+|
T Consensus 304 G~~~igg~Vw~D~n~nG~~D~~e~gl~gv~v~L~d~~--G~-------~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 304 GFGGFGGYVWFDKNNDGVQNDSNAAAAGITVNLLDPT--GI-------RLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp CEEEEEEEEEECTTSSSSSCCSSCBCTTCEEEEECTT--SC-------EEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred ceEEEccEEEEeCCCCCCcCcCCCCcCCeEEEEEcCC--CC-------EEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 446788887642 2222223367788999985332 12 124678999999999999999999987654
No 35
>2v4v_A GH59 galactosidase; hydrolase, family 6 carbohydrate binding module, CCCBM6; HET: XYP; 1.50A {Clostridium cellulolyticum}
Probab=72.56 E-value=14 Score=32.70 Aligned_cols=79 Identities=15% Similarity=0.221 Sum_probs=45.0
Q ss_pred ccEEEEEEeccc-CCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeeeecEEEEEEeeCCC
Q 006741 537 GHYTLQLALASA-TDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGRNTIYLTQSRSRS 615 (633)
Q Consensus 537 ~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~g~s 615 (633)
+.+++.+-+|++ +++.++|++++.+.. ...+-.++... + -..|...+.+|+ +.+|...|+|....++.
T Consensus 49 G~~~~~~rvas~~~gg~ievrlds~~G~--~~g~~~v~~Tg-----g-w~~~~t~~~~v~---~~~G~h~l~l~f~g~~~ 117 (129)
T 2v4v_A 49 GVGGFQARVASATSGGNIEIRLDSSTGT--LIGTCPVAGTG-----D-WQTYTDAKCTVS---GVTGKHDVYLVFKGDSG 117 (129)
T ss_dssp CCCEEEEEEEESSCCEEEEEEESSTTSC--EEEEEEECCCS-----E-EEEEEEEEEECC---CCEEEEEEEEEEECSSS
T ss_pred CeEEEEEEEEcCCCCcEEEEEECCCCCe--EEEEEEecCCC-----C-CceeEEEEEEEc---cCCceEEEEEEEECCCC
Confidence 344444444553 567999999976542 11121222221 1 123455555553 57999999999865431
Q ss_pred CCceEEEEEEEEe
Q 006741 616 PFQGVLYDYIRLE 628 (633)
Q Consensus 616 ~~~~vmyD~IrLe 628 (633)
. -+-.|.++++
T Consensus 118 ~--~~nld~~~f~ 128 (129)
T 2v4v_A 118 Y--LFNLNWFTFS 128 (129)
T ss_dssp C--CCEEEEEEEE
T ss_pred c--eEEEEEEEEE
Confidence 1 2677888875
No 36
>1uxx_X Xylanase U; carbohydrate binding module, CBM6, xylopentaose binding, xylan degradation; HET: XYP; 1.6A {Clostridium thermocellum} SCOP: b.18.1.10 PDB: 1gmm_A*
Probab=70.88 E-value=24 Score=31.50 Aligned_cols=77 Identities=22% Similarity=0.387 Sum_probs=46.3
Q ss_pred ccEEEEEEeccc--CCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeeeecEEEEEEeeCC
Q 006741 537 GHYTLQLALASA--TDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGRNTIYLTQSRSR 614 (633)
Q Consensus 537 ~~~tLriala~a--~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~g~ 614 (633)
+.+++.+-+|+. .++.++|++++.+.. +..+-.++... ++ -.|...+.+|+ +.+|...|+|.. .|
T Consensus 51 G~~~~~~rvas~~~~gg~ievr~ds~~G~--~~gt~~v~~Tg-----gw-~~~~~~~~~v~---~~~G~h~l~l~f-~G- 117 (133)
T 1uxx_X 51 GANSFKARVASGADTPTNIQLRLGSPTGT--LIGTLTVASTG-----GW-NNYEEKSCSIT---NTTGQHDLYLVF-SG- 117 (133)
T ss_dssp CEEEEEEEEEECCSSCEEEEEEESSTTSE--EEEEEEECCCS-----EE-EEEEEEEEEEE---EECSEEEEEEEE-SS-
T ss_pred CcEEEEEEEEeCCCCCcEEEEEECCCCCc--EEEEEEeCCCC-----CC-ceEEEEEEEEc---cCCcEEEEEEEE-EC-
Confidence 566666666654 356999999986532 11121222221 11 23455555554 468999999976 45
Q ss_pred CCCceEEEEEEEEecC
Q 006741 615 SPFQGVLYDYIRLEGP 630 (633)
Q Consensus 615 s~~~~vmyD~IrLe~p 630 (633)
++-.|.++++.+
T Consensus 118 ----~~nl~~~~f~~~ 129 (133)
T 1uxx_X 118 ----PVNIDYFIFDSN 129 (133)
T ss_dssp ----CCEEEEEEEECC
T ss_pred ----CcEEEEEEEEcC
Confidence 377899998865
No 37
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=70.08 E-value=92 Score=37.41 Aligned_cols=41 Identities=15% Similarity=0.210 Sum_probs=36.3
Q ss_pred CCeEEEEcCCEEEEEECCeEEEEEeCCceeEEEEEECCeecc
Q 006741 4 LGVQLNTKHRRLVVMDNGLVQVTLSNPEGEVIGIKYNEIDNV 45 (633)
Q Consensus 4 ~~v~l~~~g~~~~vidNg~l~~tv~k~~G~itsi~y~G~~nl 45 (633)
..+++++++.. ++|.++..+++++|.+|.++|++++|.+.|
T Consensus 745 ~~~~~~~~~~~-~~v~~~~~~~~f~k~~G~l~s~~~~g~~~l 785 (1032)
T 3oba_A 745 KAAKINDGKRY-VSVESSGLHFILDKLLGKIESLKVKGKEIS 785 (1032)
T ss_dssp CCCEEEECSSE-EEEEETTEEEEEETTTTEEEEEEETTEEEE
T ss_pred CCcEEEecCCE-EEEEECCEEEEEECCcceEEEEEECCEEEe
Confidence 34678888999 999998999999999999999999999644
No 38
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=63.58 E-value=6.3 Score=47.03 Aligned_cols=72 Identities=17% Similarity=0.158 Sum_probs=44.1
Q ss_pred EEEEEEecCCCCCccEEEEEEecccC--C--CceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCce
Q 006741 524 WRIIFELKHLNNNGHYTLQLALASAT--D--SDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLL 599 (633)
Q Consensus 524 w~I~F~L~~~~~~~~~tLriala~a~--~--~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L 599 (633)
.+=.|+|+... .....|.|-+..-. . .+-+|.|||+.+.. ++ -..+-.-.|.||+++|
T Consensus 855 yr~~f~L~~p~-g~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGr----y~-------------~~~~pqr~y~VP~giL 916 (971)
T 1tg7_A 855 YSTSFDLDLPS-GYDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGK----YV-------------NNIGPQTSFPVPEGIL 916 (971)
T ss_dssp EEEEEECCCCT-TEECCEEEEECCCCSSCCCEEEEEEETTEEEEE----EE-------------TTTCSCCEEEECBTTB
T ss_pred EEEEEeccCCC-CCCceEEEEcCCCCCCCccceEEEEECCEEEee----ec-------------CCCCCCEEEECCHHHh
Confidence 45678876542 22223444332211 1 38999999986542 10 0111234689999999
Q ss_pred -eeeecEEEEEEeeC
Q 006741 600 -NRGRNTIYLTQSRS 613 (633)
Q Consensus 600 -~~G~NtI~lt~~~g 613 (633)
++|.|+|.|++..-
T Consensus 917 n~~G~N~i~vrv~~~ 931 (971)
T 1tg7_A 917 NYHGTNWLALSLWAQ 931 (971)
T ss_dssp CTTSEEEEEEEEEEC
T ss_pred CcCCccEEEEEEecC
Confidence 99999999987653
No 39
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=60.20 E-value=6.2 Score=35.90 Aligned_cols=68 Identities=15% Similarity=0.065 Sum_probs=44.0
Q ss_pred CceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceE----eCcccCCceEEEEEECc
Q 006741 330 QRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFS----IKNVRQGDYNLYAWIPG 405 (633)
Q Consensus 330 qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~Ft----I~nVrpGtY~L~a~~~G 405 (633)
.++.++=.|+-.- ..+||.++.|-|......+.|+. -.-..||++|+.. -..+.+|.|+|..-
T Consensus 8 ~~~~LStHVLDt~-----~G~PAagv~V~L~~~~~~~~w~~-----l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~--- 74 (127)
T 2h4e_A 8 SKXPLMVKVLDAV-----RGSPAINVAVHVFRKAADDTWEP-----FASGKTSESGELHGLTTEEEFVEGIYKVEID--- 74 (127)
T ss_dssp --CCEEEEEEETT-----TTEECTTCEEEEEEECTTSCEEE-----EEEEECCTTSEECCSCCTTTCCSEEEEEEEC---
T ss_pred CcCCEEEEEecCC-----CcCCCCCCEEEEEEeCCCCCeEE-----EEEeecCCCccccCcCCCCCccceEEEEEEE---
Confidence 3577777765432 34899999999954221123441 2346789999872 34578999999987
Q ss_pred eeeeee
Q 006741 406 IVGDYK 411 (633)
Q Consensus 406 ~~G~~~ 411 (633)
.|+|.
T Consensus 75 -tg~Yf 79 (127)
T 2h4e_A 75 -TKSYW 79 (127)
T ss_dssp -HHHHH
T ss_pred -hHHhH
Confidence 56554
No 40
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=59.57 E-value=4.1 Score=37.96 Aligned_cols=66 Identities=14% Similarity=0.051 Sum_probs=44.6
Q ss_pred ceEEEEEEEE-ccccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceEe----CcccCCceEEEEEECc
Q 006741 331 RGGVFGQLRV-HDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSI----KNVRQGDYNLYAWIPG 405 (633)
Q Consensus 331 RGtVsG~l~~-sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI----~nVrpGtY~L~a~~~G 405 (633)
|.-++=.|+- ..| .||.++.|-|.....++.|+. -.-.+||++|+..- ....+|.|+|...
T Consensus 29 k~PLTtHVLDt~~G------~PA~gv~V~L~~~~~~~~~~~-----l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~--- 94 (147)
T 4ank_A 29 KCPLMVKVLDAVRG------SPAINVAVHVFRKAADDTWEP-----FASGKTSESGELHGLTTEEEFVEGIYKVEID--- 94 (147)
T ss_dssp -CCEEEEEEETTTT------EECCSCEEEEEEECTTSCEEE-----EEEEECCTTSEECCSCCTTTCCSEEEEEEEC---
T ss_pred CCCeEEEEEeCCCC------cCCCCCEEEEEEECCCCCeEE-----EEEEEeCCCCCCCCCCCccccCCceEEEEEE---
Confidence 5568887754 344 899999999964443345542 23467899998642 3567899999987
Q ss_pred eeeeee
Q 006741 406 IVGDYK 411 (633)
Q Consensus 406 ~~G~~~ 411 (633)
.|+|.
T Consensus 95 -tg~Yf 99 (147)
T 4ank_A 95 -TKSYW 99 (147)
T ss_dssp -HHHHH
T ss_pred -HHHHH
Confidence 56554
No 41
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=55.26 E-value=2.5 Score=50.73 Aligned_cols=85 Identities=20% Similarity=0.280 Sum_probs=0.0
Q ss_pred EEEEEecCCCCCccEEEEEEecccC--CCceEEEEcCCCC-CCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceee
Q 006741 525 RIIFELKHLNNNGHYTLQLALASAT--DSDLHVRFNNPNA-DPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNR 601 (633)
Q Consensus 525 ~I~F~L~~~~~~~~~tLriala~a~--~~~~~V~vNg~~~-~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 601 (633)
.|.|++. ++..|.|+|.|-.|... ...+.|.|||... ..-.| +.. +++. .+...++.| .|++
T Consensus 945 ~v~~~V~-v~~aG~Y~l~iryan~~~~~r~~~l~VNG~~~~~~v~~-----~~T-----g~W~-~w~~~~~~v---~L~a 1009 (1032)
T 2vzs_A 945 SVEWTVT-VPSAGTYDVVVRYANGTTTSRPLDFSVNGSISASGVAF-----GST-----GTWP-AWTTKTVRV---TLAA 1009 (1032)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEE-CCCCeEEEEEEEEEcCCCCCeeEEEEECCeEeeeEEEe-----cCC-----CCCC-ccEEEEEEE---EECC
Confidence 3556654 34468999999988753 4679999999753 21111 111 0111 133333333 3899
Q ss_pred eecEEEEEEeeCCCCCceEEEEEEEE
Q 006741 602 GRNTIYLTQSRSRSPFQGVLYDYIRL 627 (633)
Q Consensus 602 G~NtI~lt~~~g~s~~~~vmyD~IrL 627 (633)
|.|+|+|....+. -++=.|+|.+
T Consensus 1010 G~NtI~~~~~~~~---g~~niD~i~v 1032 (1032)
T 2vzs_A 1010 GVNKIKAVATTAN---GGPNVDKITL 1032 (1032)
T ss_dssp --------------------------
T ss_pred CceEEEEEEcCCc---CceEEEEEEC
Confidence 9999999864221 1466677654
No 42
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=55.13 E-value=4.4 Score=36.50 Aligned_cols=54 Identities=15% Similarity=0.110 Sum_probs=36.5
Q ss_pred ccccCccEEEecCCCCCCcccccCccceeEEEeCCccce----EeCcccCCceEEEEEECceeeeee
Q 006741 349 LMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYF----SIKNVRQGDYNLYAWIPGIVGDYK 411 (633)
Q Consensus 349 ~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~F----tI~nVrpGtY~L~a~~~G~~G~~~ 411 (633)
.+||.++.|-|......+.|+. -.-+.||++|+. .-..+.+|.|+|..- .|+|.
T Consensus 14 G~PAagv~V~L~~~~~~~~~~~-----l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~----tg~Yf 71 (119)
T 1oo2_A 14 GTPAGSVALKVSQKTADGGWTQ-----IATGVTDATGEIHNLITEQQFPAGVYRVEFD----TKAYW 71 (119)
T ss_dssp TEECTTCEEEEEEECTTSCEEE-----EEEEECCTTSCCTTCSCGGGCCSEEEEEEEC----HHHHH
T ss_pred cCCCCCCEEEEEEeCCCCCcEE-----EEEEecCCCCcccCcCCCCCCCceEEEEEEE----hHHhH
Confidence 3899999999954221123441 234678999986 233578999999987 55554
No 43
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=54.77 E-value=8.9 Score=34.26 Aligned_cols=54 Identities=17% Similarity=0.069 Sum_probs=36.6
Q ss_pred ccccCccEEEecCCCCCCcccccCccceeEEEeCCccceE----eCcccCCceEEEEEECceeeeee
Q 006741 349 LMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFS----IKNVRQGDYNLYAWIPGIVGDYK 411 (633)
Q Consensus 349 ~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~Ft----I~nVrpGtY~L~a~~~G~~G~~~ 411 (633)
.+||.++.|-|......+.|+ .-.-+.||++|+.. -..+.+|.|+|..- .|+|.
T Consensus 13 G~PAagv~V~L~~~~~~~~~~-----~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~----tg~Yf 70 (115)
T 1f86_A 13 GSPAINVAVHVFRKAADDTWE-----PFASGKTSESGELHGLTTEEEFVEGIYKVEID----TKSYW 70 (115)
T ss_dssp TEECTTCEEEEEEECTTSCEE-----EEEEEECCTTSEECCSCCTTTCCSEEEEEEEC----HHHHH
T ss_pred CCcCCCCEEEEEEcCCCCCcE-----EEEEeecCCCccccCcCCCCCCcceEEEEEEE----hhHhH
Confidence 389999999995432112344 23346789999872 33578999999987 55554
No 44
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=54.05 E-value=42 Score=30.49 Aligned_cols=76 Identities=16% Similarity=0.239 Sum_probs=45.9
Q ss_pred ccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeeeecEEEEEEeeCCCC
Q 006741 537 GHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGRNTIYLTQSRSRSP 616 (633)
Q Consensus 537 ~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~g~s~ 616 (633)
+.+++.+-+|++.++.++|++++.... +..+-.++...+ --.|...+.+|. +.+|...|+|.. +|
T Consensus 68 G~~~~~~rvas~~gg~ievrlds~~G~--~lgt~~v~~Tgg------w~~w~tv~~~v~---~~~G~h~lyl~f-~g--- 132 (145)
T 1uy4_A 68 GATGFSATVATEVNTSIQIRSDSPTGT--LLGTLYVSSTGS------WNTYNTVSTNIS---KITGVHDIVLVF-SG--- 132 (145)
T ss_dssp CEEEEEEEEECSSCEEEEEEESSTTSC--EEEEEEECCCSS------TTCCEEEEEEEE---EECSEEEEEEEE-SS---
T ss_pred CCEEEEEEEEeCCCcEEEEEECCCCCc--EEEEEEecCCCC------CcccEEEEEEec---CCCceEEEEEEE-eC---
Confidence 566666666666678999999986532 111211221110 113555555554 368999999986 45
Q ss_pred CceEEEEEEEEec
Q 006741 617 FQGVLYDYIRLEG 629 (633)
Q Consensus 617 ~~~vmyD~IrLe~ 629 (633)
++-.|.++++.
T Consensus 133 --~~nl~~~~F~~ 143 (145)
T 1uy4_A 133 --PVNVDNFIFSR 143 (145)
T ss_dssp --CCEEEEEEEEE
T ss_pred --CeEEEEEEEEe
Confidence 37788888874
No 45
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=53.09 E-value=17 Score=32.43 Aligned_cols=67 Identities=21% Similarity=0.202 Sum_probs=42.7
Q ss_pred CceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceE----eCcccCCceEEEEEECc
Q 006741 330 QRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFS----IKNVRQGDYNLYAWIPG 405 (633)
Q Consensus 330 qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~Ft----I~nVrpGtY~L~a~~~G 405 (633)
+|+.++=.|+-.- ..+||.++.|-|..... +.|+ .-.-..||++|+.. -..+.+|.|+|..-
T Consensus 2 ~~~~lstHVLDt~-----~G~PAagv~V~L~~~~~-~~~~-----~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~--- 67 (114)
T 2g2n_A 2 QQNILSVHILNQQ-----TGKPAADVTVTLEKKAD-NGWL-----QLNTAKTDKDGRIKALWPEQTATTGDYRVVFK--- 67 (114)
T ss_dssp --CCEEEEEEETT-----TTEECCSCEEEEEEECS-SSEE-----EEEEEECCTTSEESCCSCSSCCCSEEEEEEEC---
T ss_pred CCCCeEEEEecCC-----CcCCCCCCEEEEEEeCC-CCcE-----EEEEEecCCCCccccccCCCCCCceEEEEEEE---
Confidence 5677877765432 34899999999954221 1243 12345689999862 23578899999986
Q ss_pred eeeeee
Q 006741 406 IVGDYK 411 (633)
Q Consensus 406 ~~G~~~ 411 (633)
.|+|.
T Consensus 68 -tg~Yf 72 (114)
T 2g2n_A 68 -TGDYF 72 (114)
T ss_dssp -HHHHH
T ss_pred -hhHhH
Confidence 55554
No 46
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=53.05 E-value=14 Score=42.31 Aligned_cols=77 Identities=18% Similarity=0.189 Sum_probs=51.8
Q ss_pred eEEEEEEecCCCC---CccEEEEEEeccc----CCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEee
Q 006741 523 TWRIIFELKHLNN---NGHYTLQLALASA----TDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVP 595 (633)
Q Consensus 523 ~w~I~F~L~~~~~---~~~~tLriala~a----~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ip 595 (633)
.-.|.|.|..+.- ....+|.|..+-+ ..+++.|.|||+-+. +..+.+.. .|....+++.||
T Consensus 319 ~i~V~FrLPPDLfvw~~tga~L~L~YRYSp~l~~~S~L~VsLNgqfV~-----SlPL~~~~-------~g~~~~~~IpLP 386 (707)
T 4hg6_B 319 NRDIDFQLPDDWLLLASQKAQIGIDYGFAGGLPEGALLLVKVNGTTVR-----MLPLDRDA-------APVKPRLDIRFP 386 (707)
T ss_dssp EEEEEEECCSSCCCCSSCEEEEEECEEECSSCCTTCEEEEEETTEEEE-----EEESSSCC-------BSSCCCEEEEEE
T ss_pred CceeEEeCCCCeecccCCCceEEEEEecCCCCCCCCeEEEEECCEEEE-----EEEcCccc-------CCccceeEeecC
Confidence 3678888876652 2345566555543 458999999997543 11122211 244567899999
Q ss_pred CCceeeeecEEEEEEe
Q 006741 596 SVLLNRGRNTIYLTQS 611 (633)
Q Consensus 596 a~~L~~G~NtI~lt~~ 611 (633)
+.+|+.|.|.|.|...
T Consensus 387 p~ll~~g~NqL~FeF~ 402 (707)
T 4hg6_B 387 ARLLHPGPNRLSFESV 402 (707)
T ss_dssp GGGCCSSEEEEEEEEE
T ss_pred HHHcCCCCceEEEEEE
Confidence 9999889999999864
No 47
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=52.47 E-value=8.2 Score=44.30 Aligned_cols=73 Identities=19% Similarity=0.112 Sum_probs=50.1
Q ss_pred eEEEEEEecCCCCCccEEEEEEeccc-----CCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCC
Q 006741 523 TWRIIFELKHLNNNGHYTLQLALASA-----TDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSV 597 (633)
Q Consensus 523 ~w~I~F~L~~~~~~~~~tLriala~a-----~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~ 597 (633)
.-.+.|.++++- ..++|+|..+.+ ..++++|.|||..... -.+..... ....+|+||+
T Consensus 62 ~~~~~f~l~~vV--t~A~L~L~Yt~SPsLlPe~S~LkV~LNge~VGt-----lpl~~~~~---------~~~~~i~Ipp- 124 (707)
T 4hg6_B 62 RAAFRLFLPTEA--VGGTLTLAQRSSIDILPESSQIIVRMNDQEIGR-----FTPRQFGA---------LGAVTMPLGE- 124 (707)
T ss_dssp EEEEEEECSSCC--TTCCBBCEEECSSCCCBTTBEEEEEETTEEEEE-----ECCCCCSS---------CCCBCCCCCS-
T ss_pred ceeEEEEccchh--eeEEEEEEEeeCccccCccceEEEEECCEEEEE-----EecCCCCC---------ceeEEEecCh-
Confidence 466778887743 356677766654 4588999999986541 11222111 2445999998
Q ss_pred ceeeeecEEEEEEee
Q 006741 598 LLNRGRNTIYLTQSR 612 (633)
Q Consensus 598 ~L~~G~NtI~lt~~~ 612 (633)
.|..|.|.|.|....
T Consensus 125 ~l~~gfN~L~fe~ig 139 (707)
T 4hg6_B 125 AVRAGDNLVTIEAQH 139 (707)
T ss_dssp SSCSSEEEEEEEEEC
T ss_pred HHcCCcceEEEEEcC
Confidence 899999999999764
No 48
>1od3_A Putative xylanase; hydrolase, carbohydrate binding module, beta-sandwich, laminaribiose; HET: BGC; 1.0A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1nae_A* 1o8s_A* 1o8p_A
Probab=52.26 E-value=49 Score=30.92 Aligned_cols=77 Identities=21% Similarity=0.314 Sum_probs=48.0
Q ss_pred ccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeeeecEEEEEEeeCCCC
Q 006741 537 GHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGRNTIYLTQSRSRSP 616 (633)
Q Consensus 537 ~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~g~s~ 616 (633)
+.+++.+-+|++.++.++|++++.+.. ...+-.++...+ --.|...+.+|+ +.+|...|+|... |
T Consensus 90 G~~~~~~rvas~~~G~ievrlds~~G~--~lgt~~vp~Tgg------w~~w~tvt~~v~---~~~G~hdLylvf~-G--- 154 (168)
T 1od3_A 90 GATSVTARVATQNATTIQVRLGSPSGT--LLGTIYVGSTGS------FDTYRDVSATIS---NTAGVKDIVLVFS-G--- 154 (168)
T ss_dssp CEEEEEEEEECSSCEEEEEEESSTTSC--EEEEEEECCCSS------TTCCEEEEEEEE---EECSEEEEEEEES-S---
T ss_pred CcEEEEEEEEcCCCcEEEEEECCCCCc--EEEEEEeCCCCC------CcccEEEEEEEc---CCCcEEEEEEEEE-C---
Confidence 567666666766678999999986543 111111222110 013566666664 4689999999764 5
Q ss_pred CceEEEEEEEEecC
Q 006741 617 FQGVLYDYIRLEGP 630 (633)
Q Consensus 617 ~~~vmyD~IrLe~p 630 (633)
++-.|.++++..
T Consensus 155 --~~nldw~~F~~~ 166 (168)
T 1od3_A 155 --PVNVDWFVFSKS 166 (168)
T ss_dssp --CCEEEEEEEECC
T ss_pred --CcEEEEEEEEeC
Confidence 378888888753
No 49
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=51.85 E-value=7.6 Score=44.58 Aligned_cols=69 Identities=17% Similarity=0.166 Sum_probs=47.5
Q ss_pred eEEEEEEecCCCCCccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeee
Q 006741 523 TWRIIFELKHLNNNGHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRG 602 (633)
Q Consensus 523 ~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 602 (633)
..+=.|.+++........|++.. ......|.|||..+. .-.|-+..++|+|+ ..|+.|
T Consensus 63 wYr~~f~~p~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg------------------~~~~g~~~f~~dIt-~~l~~G 120 (692)
T 3fn9_A 63 YYRKTQFFPHDLEGKRVFLRFEG---VGACAEVYVNGKLAG------------------THKGGYSAFACEIG-TALKLG 120 (692)
T ss_dssp EEEEEEEECGGGTTCEEEEEESC---CBSEEEEEETTEEEE------------------EEECTTSCEEEECG-GGCCTT
T ss_pred EEEEEEEECchhCCCeEEEEECC---ccEeeEEEECCEEee------------------eEcCCcceEEEECh-HhcCCC
Confidence 35567888765433345555543 346678999997432 11255677899998 788999
Q ss_pred -ecEEEEEEeeC
Q 006741 603 -RNTIYLTQSRS 613 (633)
Q Consensus 603 -~NtI~lt~~~g 613 (633)
+|+|.+.+.+.
T Consensus 121 ~~N~l~V~v~~~ 132 (692)
T 3fn9_A 121 AENEIIVKADNK 132 (692)
T ss_dssp EEEEEEEEEECC
T ss_pred CceEEEEEEECC
Confidence 89999999764
No 50
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=50.62 E-value=12 Score=44.61 Aligned_cols=70 Identities=19% Similarity=0.213 Sum_probs=42.7
Q ss_pred EEEEEEecCCCCCccEEEEEEecccC---CCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCcee
Q 006741 524 WRIIFELKHLNNNGHYTLQLALASAT---DSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLN 600 (633)
Q Consensus 524 w~I~F~L~~~~~~~~~tLriala~a~---~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 600 (633)
.+=.|+|+-..+.-+..|.+-+.... .-|.++.||||.... +-. .++ -..+|.||.+.|.
T Consensus 887 yrt~f~LdlP~~g~Dvpl~~~f~~~~~~~~yRa~lfVNG~q~Gk--yv~-~iG--------------PQt~FpvP~GILn 949 (1003)
T 3og2_A 887 YAAKLPLHLPAQEYDIPLSFVFDNATAAAPYRALLYVNGFQYGK--YVS-NIG--------------PQTEFPVPEGILD 949 (1003)
T ss_dssp EEEEEEEECCTTTEECCEEEEECCCSSCCCEEEEEEETTEEEEE--EET-TTC--------------CCCEEEECBTTBC
T ss_pred EEEEeecCCCcccCceeEEEEECCCCCCcceEEEEEEeceeeee--ecC-CCC--------------CcceecCCccccc
Confidence 33466664320211233444444332 358999999986542 100 011 2347999999999
Q ss_pred -eeecEEEEEE
Q 006741 601 -RGRNTIYLTQ 610 (633)
Q Consensus 601 -~G~NtI~lt~ 610 (633)
.|+|+|-|++
T Consensus 950 ~~G~Ntialal 960 (1003)
T 3og2_A 950 YNGDNWIGVAL 960 (1003)
T ss_dssp TEEEEEEEEEE
T ss_pred CCCcceEEEEE
Confidence 8999999998
No 51
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=49.23 E-value=21 Score=31.87 Aligned_cols=52 Identities=13% Similarity=0.051 Sum_probs=30.6
Q ss_pred CceEEEEEEEEccccccccccccC--ccEEEecCCCCCCcccccCccceeEEEeCCccceEeCc
Q 006741 330 QRGGVFGQLRVHDRYISNRLMWAD--SAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSIKN 391 (633)
Q Consensus 330 qRGtVsG~l~~sd~~~~~~~~pa~--~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI~n 391 (633)
|--.|+|+|+=. + .||+ ++.|.|-.... --.+....---+.||++|+|+|..
T Consensus 3 qsV~V~G~L~C~-~------~Pa~~~~V~V~L~d~~~---~~~d~Ddll~~~~Td~~G~F~l~G 56 (117)
T 3uaf_A 3 SCLMATGVLKCP-T------DPEAVKKVHIDLWDAAA---AAAESDDLMGRTWSDRNGNFQVTG 56 (117)
T ss_dssp EEEEEEEEEECT-T------CGGGGSSCEEEEEEHHH---HHTTSCCEEEEEECCTTSEEEEEE
T ss_pred EEEEEEEEEEeC-C------ccCCCCCEEEEEEeccc---ccCCchHhheeeEECCCCEEEEEE
Confidence 456899999654 4 6866 67888732000 000112222346789999999863
No 52
>1yua_A Topoisomerase I; gene-regulating protein, DNA binding protein; NMR {Escherichia coli} SCOP: g.41.3.3 g.41.3.3
Probab=48.32 E-value=7.8 Score=34.47 Aligned_cols=85 Identities=22% Similarity=0.405 Sum_probs=48.4
Q ss_pred eeEEEEEEcCcceeEEEEEeeccC--CCCCCCCcceEE-EEEeCCCCcceeeeeccccccCCCCcccCCCccccccceEE
Q 006741 110 VDKRYIMRRGVSGFYFYAIMERKE--GWPDVDMDQIRT-VFKLQQNKFHFMAISNDRQRIMPMPEDRATGQPLAYPEAVL 186 (633)
Q Consensus 110 l~~~~v~r~g~sgiY~y~i~~~~~--~~p~~~lge~R~-v~Rl~~~~f~~~~~~d~r~~~mP~~~d~~~g~~l~~~e~v~ 186 (633)
.|-|||||+|-+|+++.+ ...++ +.-++-+.||+- --|| +.+|.+++-+ |..+ ..|.+++ |.
T Consensus 23 ~d~~fVLRDGAsGlFlAA-s~FPK~RETRaP~V~EL~~~~d~l-~~K~~yL~~A-------P~~D--~~Gn~ti----vr 87 (122)
T 1yua_A 23 SDAYFVLRDGAAGVFLAA-NTFPKSRETRAPLVEELYRFRDRL-PEKLRYLADA-------PQQD--PEGNKTM----VR 87 (122)
T ss_dssp SSCEEEEECCSSSCEEEE-TTTTSCCCCCSCBHHHHHHTTTTC-CSTTHHHHHS-------CSSC--TTCCCEE----EE
T ss_pred cCCEEEeeCCchhhhhhh-ccCCccccccchHHHHHHHHHHhc-CHHHHHhhcC-------CccC--CCCCeee----EE
Confidence 489999999999999998 43333 223555566542 2222 3455554421 2221 3454432 22
Q ss_pred ecCCCCCCCCceeeceeeecccccccceEEEEc
Q 006741 187 LTDPINPDLRGEVDDKYQYSSEDKDIRVHGWIS 219 (633)
Q Consensus 187 l~~~~~~~~~G~~~sKY~~s~~~~d~~vhG~~~ 219 (633)
.. -.+|=||-..-+|-+.-||..
T Consensus 88 fS----------RKtKeqYV~sE~~GKaTgW~a 110 (122)
T 1yua_A 88 FS----------RKTKQQYVSSEKDGKATGWSA 110 (122)
T ss_dssp EE----------TTTTEEEEEECCTTSCCCCCE
T ss_pred ee----------ccchhheeeeccCCcccceEE
Confidence 21 126666766667888888864
No 53
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=46.60 E-value=14 Score=41.45 Aligned_cols=66 Identities=17% Similarity=0.155 Sum_probs=45.0
Q ss_pred EEEEEEecCCCCCccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEE-eeeEEEEEEeeCCceeee
Q 006741 524 WRIIFELKHLNNNGHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIH-GLYRLYSIDVPSVLLNRG 602 (633)
Q Consensus 524 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~-G~~~~~~~~ipa~~L~~G 602 (633)
.+-.|.+++........|++.. ....-.|.|||..+. .| |-+..++|+|+ ..|+.|
T Consensus 71 Y~~~f~~p~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg-------------------~~~~~~~p~~~dit-~~l~~G 127 (605)
T 3lpf_A 71 YQREVFIPKGWAGQRIVLRFDA---VTHYGKVWVNNQEVM-------------------EHQGGYTPFEADVT-PYVIAG 127 (605)
T ss_dssp EEEEEECCTTCSSCEEEEEESC---CBSEEEEEESSCEEE-------------------EECCSSSCEEEECG-GGCCTT
T ss_pred EEEEEECCcccCCCEEEEEECC---cceEEEEEECCEEEE-------------------EEcCCCCcceeech-hhccCC
Confidence 4567888765443345555543 345678999998542 22 55667899998 788999
Q ss_pred ec-EEEEEEee
Q 006741 603 RN-TIYLTQSR 612 (633)
Q Consensus 603 ~N-tI~lt~~~ 612 (633)
+| +|++.+..
T Consensus 128 ~nn~l~V~v~n 138 (605)
T 3lpf_A 128 KSVRITVCVNN 138 (605)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEEec
Confidence 86 89998843
No 54
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=46.21 E-value=23 Score=37.04 Aligned_cols=46 Identities=11% Similarity=0.081 Sum_probs=32.2
Q ss_pred ccccCccEEEecCCCCCCcccccCccceeEEEeCCccceEeCcccCCceEEEEE
Q 006741 349 LMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSIKNVRQGDYNLYAW 402 (633)
Q Consensus 349 ~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI~nVrpGtY~L~a~ 402 (633)
..+..+|...|.... +...+--..||++|.++|.++++|+|.|.=-
T Consensus 19 ~~~L~GA~F~l~~~~--------g~~~~~~~tTd~~G~~~~~~L~~G~Y~~~Et 64 (355)
T 3kpt_A 19 EKAMAGAVFSLFKKD--------GTEVKKELATDANGHIRVQGLEYGEYYFQET 64 (355)
T ss_dssp GCBCCSCEEEEEETT--------SCEEEEEEECCTTSEEEEEEEESEEEEEEEE
T ss_pred CCCcCCcEEEEEECC--------CCEEEEEEEECCCCeEEECCcCCceEEEEEE
Confidence 367778887774221 1222223468999999999999999998754
No 55
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=45.42 E-value=20 Score=32.08 Aligned_cols=63 Identities=16% Similarity=0.071 Sum_probs=41.8
Q ss_pred CceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceEe---CcccCCceEEEEEECce
Q 006741 330 QRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSI---KNVRQGDYNLYAWIPGI 406 (633)
Q Consensus 330 qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI---~nVrpGtY~L~a~~~G~ 406 (633)
+-+.++=.|+-.- ..+||.++.|-|... + ..-.-+.||+||+... ..+.+|+|+|..-
T Consensus 8 ~M~~lstHVLDt~-----~G~PAagv~V~L~~~--------~--~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~---- 68 (116)
T 3qva_A 8 HMSTLSTHILDIS-----TGTPAEGVTVSLSRE--------G--ETLANLVTNAQGRIATFSAAPLPAGRYCLTAE---- 68 (116)
T ss_dssp -CBCEEEEEEETT-----TTEECTTCEEEEEET--------T--EEEEEEECCTTSEECCSCSSCBCSSEEEEEEC----
T ss_pred ccCCeeeEEeecC-----CCcCCCCCEEEEEEc--------c--EeEEEeccCCCCCccccccccCCCceEEEEEe----
Confidence 3456887765332 238999999999421 1 1234467899998642 4578999999987
Q ss_pred eeeee
Q 006741 407 VGDYK 411 (633)
Q Consensus 407 ~G~~~ 411 (633)
.|+|.
T Consensus 69 tg~Yf 73 (116)
T 3qva_A 69 TGAWF 73 (116)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 56
>3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A*
Probab=43.53 E-value=81 Score=33.96 Aligned_cols=80 Identities=14% Similarity=0.231 Sum_probs=47.1
Q ss_pred ccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeeeecEEEEEEeeCCCC
Q 006741 537 GHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGRNTIYLTQSRSRSP 616 (633)
Q Consensus 537 ~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~g~s~ 616 (633)
+.++|.+-+|+.+++.++|++++.+.. ...+-.++...+ --.|+..+.+| .. .+|.+.|+|....+. .
T Consensus 406 g~~~~~~~vas~~~g~ievr~~s~~G~--~~g~~~v~~tgg------~~~w~~~~~~v--~~-~~G~h~ly~~f~g~~-~ 473 (487)
T 3c7f_A 406 GARSFKANVASTLGGKIEVRLDSADGK--LVGTLNVPSTGG------AQTWREIETAV--SG-ATGVHKVFFVFTGTG-T 473 (487)
T ss_dssp CEEEEEEEEEESSCEEEEEEESSTTSC--EEEEEEECCCSE------EEEEEEEEEEC--CS-CCSEEEEEEEEECSC-S
T ss_pred CccEEEEEEEeCCCcEEEEEECCCCCc--EEEEEEeCCCCC------CcccEEEEEEE--cC-CCceEEEEEEEECCC-C
Confidence 566666666667788999999876543 111212222111 12344445554 33 589999999876542 1
Q ss_pred CceEEEEEEEEe
Q 006741 617 FQGVLYDYIRLE 628 (633)
Q Consensus 617 ~~~vmyD~IrLe 628 (633)
-.-+-+|.++++
T Consensus 474 ~~l~~~~~~~f~ 485 (487)
T 3c7f_A 474 GNLFNFDYWQFT 485 (487)
T ss_dssp SCCCEEEEEEEE
T ss_pred cceEEEEEEEEE
Confidence 123677888876
No 57
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=42.97 E-value=49 Score=39.08 Aligned_cols=81 Identities=14% Similarity=0.039 Sum_probs=48.3
Q ss_pred CceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceEeCcccCCceEEEEEE--Ccee
Q 006741 330 QRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSIKNVRQGDYNLYAWI--PGIV 407 (633)
Q Consensus 330 qRGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI~nVrpGtY~L~a~~--~G~~ 407 (633)
..|+|+-+=.-.+ ..+.++|..-|.... +..-..-..||++|.++|.+++||+|+|.=-- .|+.
T Consensus 46 ~~G~~~i~K~d~~------~~~L~GA~F~l~~~~--------~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~ 111 (893)
T 2ww8_A 46 AIGKVVIKETGEG------GALLGDAVFELKNNT--------DGTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYK 111 (893)
T ss_dssp CCEEEEEEEECST------TCBCCCCEEEEEETT--------TCCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBC
T ss_pred ceEEEEEEEECCC------CCccCCCEEEEEECC--------CCeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCcee
Confidence 3577765432222 367888877774332 11112324579999999999999999998763 3433
Q ss_pred eeeeeeeeEEEecCceee
Q 006741 408 GDYKYSANITVRAGSNIN 425 (633)
Q Consensus 408 G~~~~~~~VtV~aG~t~~ 425 (633)
-+ ...-.|+|++...+.
T Consensus 112 l~-~~~~~v~v~~~g~~~ 128 (893)
T 2ww8_A 112 PS-TKQWTVEVEKNGRTT 128 (893)
T ss_dssp CC-CCEEEEEECTTCCEE
T ss_pred cC-CccEEEEECCCceEE
Confidence 11 123357776554433
No 58
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=42.25 E-value=12 Score=33.73 Aligned_cols=63 Identities=19% Similarity=0.134 Sum_probs=41.5
Q ss_pred eEEEEEEEEccccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccce-----EeCcccCCceEEEEEECce
Q 006741 332 GGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYF-----SIKNVRQGDYNLYAWIPGI 406 (633)
Q Consensus 332 GtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~F-----tI~nVrpGtY~L~a~~~G~ 406 (633)
+.++=.|+-.- ..+||.++.|-|.... |+ ...-+.||+||+. .-..+++|.|+|..-
T Consensus 9 ~~lstHVLDt~-----~G~PAagv~V~L~~~~----~~-----~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~---- 70 (121)
T 2h0e_A 9 GKLTTHILDLT-----CGKPAANVKIGLKRLG----ES-----IMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFH---- 70 (121)
T ss_dssp CEEECCEEETT-----TTEECTTCEEEEEETT----SC-----CCEEEECCTTSSCSSCSEEGGGCCSEEEEEEEC----
T ss_pred CCeeEEEecCC-----CcCCCCCCEEEEEECC----ce-----EEEEEecCCCCCccCCcCCCCCcCceEEEEEEE----
Confidence 34555554321 3489999999995321 33 2345679999986 333688999999986
Q ss_pred eeeeee
Q 006741 407 VGDYKY 412 (633)
Q Consensus 407 ~G~~~~ 412 (633)
.|+|..
T Consensus 71 tg~Yf~ 76 (121)
T 2h0e_A 71 AGDYFA 76 (121)
T ss_dssp HHHHHH
T ss_pred hHHhHh
Confidence 566543
No 59
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=40.95 E-value=14 Score=44.26 Aligned_cols=67 Identities=19% Similarity=0.235 Sum_probs=45.4
Q ss_pred eEEEEEEecCCC--CC-ccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEE-eeeEEEEEEeeCCc
Q 006741 523 TWRIIFELKHLN--NN-GHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIH-GLYRLYSIDVPSVL 598 (633)
Q Consensus 523 ~w~I~F~L~~~~--~~-~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~-G~~~~~~~~ipa~~ 598 (633)
..+=.|++++.. .. ....|++.-+ .....|.|||..+. .| |-+..++|+|. ..
T Consensus 121 wYrr~F~vp~~~~~~g~~rv~L~F~gv---~~~a~V~vNG~~VG-------------------~~~gg~~p~~~DIT-~~ 177 (1024)
T 1yq2_A 121 DFRRRFDVPAQWFESTTAALTLRFDGV---ESRYKVWVNGQEIG-------------------VGSGSRLAQEFDVS-DA 177 (1024)
T ss_dssp EEEEEEEECGGGGSTTEEEEEEEESCE---ESCEEEEETTEEEE-------------------EECCTTSCEEEECT-TT
T ss_pred EEEEEeEECchHhcCCCceEEEEECCC---CceEEEEECCEEEE-------------------EEeCCccceEEecH-Hh
Confidence 355678887653 22 2344555433 34578999997432 22 55677899997 67
Q ss_pred eeeeecEEEEEEee
Q 006741 599 LNRGRNTIYLTQSR 612 (633)
Q Consensus 599 L~~G~NtI~lt~~~ 612 (633)
|+.|+|+|.+.+.+
T Consensus 178 Lk~G~N~L~V~V~~ 191 (1024)
T 1yq2_A 178 LRAGSNLLVVRVHQ 191 (1024)
T ss_dssp CCSEEEEEEEEEES
T ss_pred ccCCCcEEEEEEEe
Confidence 89999999999964
No 60
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=40.51 E-value=3.9e+02 Score=31.33 Aligned_cols=120 Identities=13% Similarity=0.160 Sum_probs=69.4
Q ss_pred EEEECCeEEEEEeCCceeEEEEEE--CCeeccccccCCCCcceeEEEEecCCC--------CCCccccc-ccceEEEEee
Q 006741 16 VVMDNGLVQVTLSNPEGEVIGIKY--NEIDNVLETQNEEDNRGYWDVVWYEPE--------KQGSYDKL-IATDFKVIMQ 84 (633)
Q Consensus 16 ~vidNg~l~~tv~k~~G~itsi~y--~G~~nll~~~~~~~~~GY~d~~w~~~g--------~~~~~~~~-~gt~~~vi~~ 84 (633)
.+|+|+.+.|+|++ +|.| +|.= +|.+ +.. -.-|+|. |..++ ...-+... ...+++|+++
T Consensus 528 ~~leN~~~~v~~d~-~G~l-sl~Dk~~gre-~~~------~~~~~d~-gd~g~~Y~~~p~~~d~~~~~~~~~~~v~v~e~ 597 (899)
T 3lvt_A 528 NEMENEFIQVKIEN-NGSL-TIADKKTGET-FSK------LLTFEDT-GDIGNEYIFFKPTEDQGITTENVTAEITNKEN 597 (899)
T ss_dssp TEEECSSEEEEECT-TSCE-EEEETTTCCE-EEE------ETEEEEE-ECCSBTTBCCCCTTCCCEESTTCCCEEEEEEE
T ss_pred cEEecCcEEEEEcC-CCcE-EEEECCCCeE-EEE------EEEEecC-CCCCCceeecCCcCCceeeccCCCceEEEEEc
Confidence 57999999999998 8999 6742 3442 221 0124443 22111 00000000 1257788888
Q ss_pred cCCEEEEEEEEeec-c-cc------------------CC---CccccceeEEEEEEcCcceeEEEEEeeccCCCCCCCCc
Q 006741 85 DENQVEVSFTRTWN-I-SL------------------RG---SLAPLNVDKRYIMRRGVSGFYFYAIMERKEGWPDVDMD 141 (633)
Q Consensus 85 ~~~~i~vs~~~~~~-~-s~------------------~g---~~~~~~l~~~~v~r~g~sgiY~y~i~~~~~~~p~~~lg 141 (633)
++-...|.+...|. | +. .| ...++.|.+.+.|..|+.-|-.=+....... =-
T Consensus 598 gpl~~~v~v~~~~~~P~~~~~~~~~~~~~~~~~~~r~~~~S~~~~~~~i~q~i~L~~~~~~id~~~~Vdw~~~-----~~ 672 (899)
T 3lvt_A 598 SPVKASYQIKQTVMLPVAADERLEEEQKAVREFRERLAQRSTTLRPFEITTMVTMIKESNQLFFETTINNQIK-----DH 672 (899)
T ss_dssp CSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCCCEEEEEEEEECCC-----SE
T ss_pred CCCEEEEEEEEEEccccchhhhhcccccccccchhhhhcccccccceEEEEEEEEeCCCCEEEEEEEECCCcC-----CE
Confidence 88777777776663 1 00 01 2356789999999999999888776644331 13
Q ss_pred ceEEEEEeC
Q 006741 142 QIRTVFKLQ 150 (633)
Q Consensus 142 e~R~v~Rl~ 150 (633)
.+|..|.++
T Consensus 673 ~Lrv~Fp~~ 681 (899)
T 3lvt_A 673 RLRVLFPTG 681 (899)
T ss_dssp EEEEEECCS
T ss_pred EEEEECCCC
Confidence 455555543
No 61
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=39.64 E-value=20 Score=40.63 Aligned_cols=69 Identities=13% Similarity=0.224 Sum_probs=46.5
Q ss_pred eeEEEEEEecCCCCCccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceee
Q 006741 522 TTWRIIFELKHLNNNGHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNR 601 (633)
Q Consensus 522 ~~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 601 (633)
...+-.|.+++........|++.-+ .....|.|||+.+. .-.|-+..++|+|.. .|+.
T Consensus 51 ~wYr~~f~~p~~~~~~~~~L~f~gv---~~~a~V~vNG~~vg------------------~~~~~~~~~~~dit~-~l~~ 108 (667)
T 3cmg_A 51 GNYEKALYIRPEWKGKRLFLRFDGV---NSIADVFINRKHIG------------------EHRGGYGAFIFEITD-LVKY 108 (667)
T ss_dssp EEEEEEEECCGGGTTSEEEEEESCC---BSEEEEEETTEEEE------------------EEECSSSCEEEECTT-TSCT
T ss_pred EEEEEEEECCcccCCCEEEEEECCc---cceeEEEECCEEEe------------------eecCCcccEEEECCH-HHCC
Confidence 3355678887643323455655433 45678999997432 113556778999986 7888
Q ss_pred e-ecEEEEEEee
Q 006741 602 G-RNTIYLTQSR 612 (633)
Q Consensus 602 G-~NtI~lt~~~ 612 (633)
| +|+|.+.+.+
T Consensus 109 G~~N~l~V~v~~ 120 (667)
T 3cmg_A 109 GEKNSVLVRANN 120 (667)
T ss_dssp TSEEEEEEEEEC
T ss_pred CCCcEEEEEEec
Confidence 8 8999999865
No 62
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=38.25 E-value=20 Score=41.92 Aligned_cols=67 Identities=18% Similarity=0.200 Sum_probs=45.9
Q ss_pred EEEEEEecCCCCCccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEE-eeeEEEEEEeeCCceeee
Q 006741 524 WRIIFELKHLNNNGHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIH-GLYRLYSIDVPSVLLNRG 602 (633)
Q Consensus 524 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~-G~~~~~~~~ipa~~L~~G 602 (633)
.+=.|.+++........|++.. ......|.|||..+. .| |-+..++|+|+. .|+.|
T Consensus 70 Yrk~f~vp~~~~~~~v~L~f~g---v~~~a~V~vNG~~vG-------------------~~~~g~~pf~~DIT~-~Lk~G 126 (801)
T 3gm8_A 70 YRKTFTIPSKWKNKKVQILFEG---VYLNSEVWINGHWLG-------------------KRPNGYISFVYDLTP-YLQEG 126 (801)
T ss_dssp EEEEEECCSGGGSCEEEEEESC---CBSCEEEEETTEEEE-------------------EECCSSCCEEEECGG-GCCSS
T ss_pred EEEEEEcCcccCCCEEEEEECc---cceEEEEEECCEEee-------------------cccCCcccEEEECcH-hccCC
Confidence 5567888765433345555543 345678999997442 22 456778999976 57899
Q ss_pred ecEEEEEEeeC
Q 006741 603 RNTIYLTQSRS 613 (633)
Q Consensus 603 ~NtI~lt~~~g 613 (633)
+|+|.+.+.+.
T Consensus 127 ~N~L~V~V~n~ 137 (801)
T 3gm8_A 127 KNQIAVKVDHS 137 (801)
T ss_dssp EEEEEEEEEEC
T ss_pred CcEEEEEEECC
Confidence 99999999753
No 63
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=37.69 E-value=15 Score=43.97 Aligned_cols=67 Identities=19% Similarity=0.082 Sum_probs=45.6
Q ss_pred EEEEEEecCCCCCccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeeee
Q 006741 524 WRIIFELKHLNNNGHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGR 603 (633)
Q Consensus 524 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 603 (633)
.+=.|++++........|++..+ .....|.|||..+. .-.|-+..++|+|. ..|+.|+
T Consensus 130 Yrr~F~vp~~~~g~~v~L~F~gv---~~~a~V~vNG~~vG------------------~~~gg~~p~~~DIT-~~L~~G~ 187 (1010)
T 3bga_A 130 YRRTFKVPADWKGRRVVLCCEGV---ISFYYVWVNGKLLG------------------YNQGSKTAAEWDIT-DVLSEGE 187 (1010)
T ss_dssp EEEEEECCGGGTTSEEEEEESCE---ESEEEEEETTEEEE------------------EEECSSSCEEEECG-GGCCSSE
T ss_pred EEEEeEeCcccCCCEEEEEECCC---CceeEEEECCEEEe------------------eEeCCCCcceeehh-hhccCCC
Confidence 45568887654323355665443 34678999997432 01355677899998 4889999
Q ss_pred cEEEEEEee
Q 006741 604 NTIYLTQSR 612 (633)
Q Consensus 604 NtI~lt~~~ 612 (633)
|+|.+.+.+
T Consensus 188 N~L~V~V~~ 196 (1010)
T 3bga_A 188 NVVALEVYR 196 (1010)
T ss_dssp EEEEEEEES
T ss_pred cEEEEEEEe
Confidence 999999964
No 64
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=37.52 E-value=58 Score=29.01 Aligned_cols=42 Identities=17% Similarity=0.168 Sum_probs=28.4
Q ss_pred cccCccEEEecCCCCCCcccccCccceeEEEeCCccceEeCcccCCceEEEEE
Q 006741 350 MWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSIKNVRQGDYNLYAW 402 (633)
Q Consensus 350 ~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI~nVrpGtY~L~a~ 402 (633)
.+..+|..-|.... ++-.+=|+ ++|.+.|.+++||+|.|.=-
T Consensus 40 ~~L~GA~F~l~~~~--------g~~v~~~~---sdG~~~~~~L~~G~Y~l~Et 81 (121)
T 2x5p_A 40 KELAGATMELRDSS--------GKTISTWI---SDGQVKDFYLMPGKYTFVET 81 (121)
T ss_dssp CBCCCCEEEEECTT--------SCEEEEEE---CCSSCEEEEECSEEEEEEEE
T ss_pred CCcCCCEEEEEECC--------CCEEEEEE---eCCEEEEcccCCcEEEEEEE
Confidence 56677777764321 12223354 46999999999999999754
No 65
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=36.23 E-value=22 Score=34.95 Aligned_cols=46 Identities=17% Similarity=0.330 Sum_probs=32.5
Q ss_pred EeCCccceEeCcccCCceEEEEE-EC-ceeeeeeeeeeEEEecCceeee
Q 006741 380 KANKRGYFSIKNVRQGDYNLYAW-IP-GIVGDYKYSANITVRAGSNINL 426 (633)
Q Consensus 380 ~td~~G~FtI~nVrpGtY~L~a~-~~-G~~G~~~~~~~VtV~aG~t~~l 426 (633)
.||++|.|+|.++++|+|.|.=- +| |+.=. ...-.++|++++++.+
T Consensus 177 ~Td~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~-~~~~~f~i~~~~~~~~ 224 (239)
T 2pz4_A 177 ETDSSGHIRISGLIHGDYVLKEIETQSGYQIG-QAETAVTIEKSKTVTV 224 (239)
T ss_dssp ECCTTSEEEEEEEESEEEEEEEEECCTTBCCC-CSEEEEEECTTSEEEE
T ss_pred EECCCCeEEECCCCCceEEEEEEECCCCcCcC-CccEEEEEeCCCeEEE
Confidence 58999999999999999997654 43 33211 1234688888886554
No 66
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=34.97 E-value=2e+02 Score=24.06 Aligned_cols=58 Identities=17% Similarity=0.155 Sum_probs=36.7
Q ss_pred EEEEEEEccccccccccccCccEEEecCCCCCCcccccCccceeE----EEeCCccceEeCcccCCceEEEEEECceee
Q 006741 334 VFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFW----TKANKRGYFSIKNVRQGDYNLYAWIPGIVG 408 (633)
Q Consensus 334 VsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqyw----t~td~~G~FtI~nVrpGtY~L~a~~~G~~G 408 (633)
++=+|...+| +|+.+|.|-+. +. |. +.|. .+||++|.|++. +=-|+-.+.|.-.|..|
T Consensus 3 ~~v~V~d~~G------kPV~gA~Vefe-------~y--Ny-ae~~~~~~~~TD~~G~~s~~-~G~Gd~~v~A~k~G~~g 64 (82)
T 3e8v_A 3 GSVLVTDAEG------QPVADATVEFK-------VY--NY-AEFYTVATKHTDRSGHASLT-AGKGDMLVWASKDGRFG 64 (82)
T ss_dssp EEEEEECTTS------CBCTTCEEEEE-------EE--ET-TEEEEEEEEECCTTSEEEEE-CCSEEEEEEEEETTEEE
T ss_pred EEEEEEcCCC------CCCCCCEEEEE-------EE--Ec-hheeEEEEEEECCCceEEEE-EcCCceEEEeccCCEEE
Confidence 3345555666 99999999863 43 22 2233 357999999995 44466666665556554
No 67
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=34.78 E-value=18 Score=42.39 Aligned_cols=66 Identities=21% Similarity=0.299 Sum_probs=44.1
Q ss_pred EEEEEEecCCC-CCccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceeee
Q 006741 524 WRIIFELKHLN-NNGHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRG 602 (633)
Q Consensus 524 w~I~F~L~~~~-~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 602 (633)
.+=.|.+++.. ......|++..+ ...-.|.|||+.+. .-.|-+..++|+|+. .|+.|
T Consensus 68 Yr~~f~~p~~~~~~~~~~L~f~gv---~~~a~V~vNG~~vg------------------~~~~~~~~~~~dIt~-~l~~G 125 (848)
T 2je8_A 68 YRTSFIVSEEQLNRDGIQLIFEGL---DTYADVYLNGSLLL------------------KADNMFVGYTLPVKS-VLRKG 125 (848)
T ss_dssp EEEEEEECHHHHTSSEEEEEESCC---BSEEEEEETTEEEE------------------EECBTTCCEEEECGG-GCCSE
T ss_pred EEEEEEcChhhcCCCeEEEEECCC---CceeEEEECCEEec------------------cccCCCCCEEEcChH-hhcCC
Confidence 34458876532 223455665433 45678999997432 012556778999987 78899
Q ss_pred ecEEEEEEe
Q 006741 603 RNTIYLTQS 611 (633)
Q Consensus 603 ~NtI~lt~~ 611 (633)
+|+|.+.+.
T Consensus 126 ~N~L~V~v~ 134 (848)
T 2je8_A 126 ENHLYIYFH 134 (848)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEEe
Confidence 999999984
No 68
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=34.39 E-value=14 Score=36.41 Aligned_cols=25 Identities=20% Similarity=0.221 Sum_probs=21.4
Q ss_pred EEEeCCccceEeCcccCCceEEEEE
Q 006741 378 WTKANKRGYFSIKNVRQGDYNLYAW 402 (633)
Q Consensus 378 wt~td~~G~FtI~nVrpGtY~L~a~ 402 (633)
-..||++|.++|.++++|+|.|.=.
T Consensus 71 ~~tTd~~G~~~~~~L~~G~Y~v~Et 95 (239)
T 2pz4_A 71 EATTNQQGKATFNQLPDGIYYGLAV 95 (239)
T ss_dssp EEECCTTSEEEEEEEESEEEEEEEE
T ss_pred EEEECCCCeEEECCCCCeeEEEEEE
Confidence 3468999999999999999998654
No 69
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=33.99 E-value=1.6e+02 Score=32.09 Aligned_cols=75 Identities=16% Similarity=0.065 Sum_probs=48.3
Q ss_pred ceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceEeC--cccCCceEEEEEECceee
Q 006741 331 RGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSIK--NVRQGDYNLYAWIPGIVG 408 (633)
Q Consensus 331 RGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI~--nVrpGtY~L~a~~~G~~G 408 (633)
.-+++-+|+-.++ .|..+..|.+..++.. .-..--..||++|.+++. .-++|+|+++|.+.|.
T Consensus 27 ~~~ltatV~D~~G------npv~g~~Vtf~~~~g~-------~~~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~g~-- 91 (492)
T 1cwv_A 27 AITVEFTVADFEG------KPLAGQEVVITTNNGA-------LPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQ-- 91 (492)
T ss_dssp CEEEEEEEECTTS------CBCCSCEEEEECCTTC-------BSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTE--
T ss_pred eEEEEEEEEcCCC------CCCCCCEEEEEECCCc-------cccccceeeCCCceEEEEEEcCcceEEEEEEEECCc--
Confidence 3556666654444 7778888887644311 111234578999987754 5689999999998763
Q ss_pred eeeeeeeEEEecCc
Q 006741 409 DYKYSANITVRAGS 422 (633)
Q Consensus 409 ~~~~~~~VtV~aG~ 422 (633)
.+...|++.+|.
T Consensus 92 --s~s~~v~f~a~~ 103 (492)
T 1cwv_A 92 --RQSVDTHFVKGT 103 (492)
T ss_dssp --EEEEEEEEECCC
T ss_pred --cceeEEEEeecc
Confidence 234456777664
No 70
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=31.92 E-value=43 Score=37.91 Aligned_cols=68 Identities=29% Similarity=0.367 Sum_probs=43.8
Q ss_pred CeeEEEEEEecCCCCCccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCcee
Q 006741 521 PTTWRIIFELKHLNNNGHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLN 600 (633)
Q Consensus 521 ~~~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 600 (633)
++=.+-.|++++. ++ .+|-...-+.=+|.|||.++.. -|.++ =..++| ||+++|+
T Consensus 508 p~~yk~~f~~~~~---~D----t~Ld~~g~gKG~vwVNG~nlGR----YW~~G-----------PqqtlY---vP~~~Lk 562 (612)
T 3d3a_A 508 PAYYRSTFNLNEL---GD----TFLNMMNWSKGMVWVNGHAIGR----YWEIG-----------PQQTLY---VPGCWLK 562 (612)
T ss_dssp CEEEEEEEEESSC---CB----EEEECTTCCEEEEEETTEEEEE----EETTC-----------SCCEEE---ECGGGCC
T ss_pred CEEEEEEEECCCC---Cc----EEEecCCCCcEEEEECCEeEEe----EEecC-----------CEEEEE---ecHHHcC
Confidence 4556777888542 22 2344456678899999987753 23221 122344 9999999
Q ss_pred eeecEEEEEEeeC
Q 006741 601 RGRNTIYLTQSRS 613 (633)
Q Consensus 601 ~G~NtI~lt~~~g 613 (633)
+|.|+|.|==..+
T Consensus 563 ~g~N~ivvfE~~~ 575 (612)
T 3d3a_A 563 KGENEIIILDMAG 575 (612)
T ss_dssp SEEEEEEEEESSC
T ss_pred CCCcEEEEEEEcC
Confidence 9999987754444
No 71
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=31.86 E-value=42 Score=37.89 Aligned_cols=26 Identities=19% Similarity=0.530 Sum_probs=23.3
Q ss_pred EEEeCCccceEeCcccCCceEEEEEE
Q 006741 378 WTKANKRGYFSIKNVRQGDYNLYAWI 403 (633)
Q Consensus 378 wt~td~~G~FtI~nVrpGtY~L~a~~ 403 (633)
|..+.....-+..|++||+|+|.|.+
T Consensus 731 W~~~~~~~~~~ytnL~pG~Y~f~V~a 756 (781)
T 3v9f_A 731 WYTINEQNSVTFRNIPPGKYEFLVKA 756 (781)
T ss_dssp EEEESSCSEEEECSCCSEEEEEEEEE
T ss_pred ccCcCCcceEEEcCCCCceEEEEEEE
Confidence 77787778899999999999999985
No 72
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=31.21 E-value=17 Score=33.48 Aligned_cols=67 Identities=15% Similarity=0.099 Sum_probs=43.1
Q ss_pred ceEEEEEEEEccccccccccccCccEEEecCCCC-CCcccccCccceeEEEeCCccceE--e--CcccCCceEEEEEECc
Q 006741 331 RGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGG-VGSWERDSKGYQFWTKANKRGYFS--I--KNVRQGDYNLYAWIPG 405 (633)
Q Consensus 331 RGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~-~g~~q~~~k~yqywt~td~~G~Ft--I--~nVrpGtY~L~a~~~G 405 (633)
++.++=.|+-.- ...||.++.|-|..... .+.|. .-.-+.||++|+.. + ..+.+|+|+|..-
T Consensus 25 ~~~LTtHVLDt~-----~G~PAagv~V~L~~~~~~~~~w~-----~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~--- 91 (138)
T 3iwv_A 25 LSPLSTHVLNIA-----QGVPGANMTIVLHRLDPVSSAWN-----ILTTGITNDDGRCPGLITKENFIAGVYKMRFE--- 91 (138)
T ss_dssp -CCEECCEEETT-----TTEECTTCEEEEEEECSSSCCEE-----EEEEEECCTTSCCTTSSCTTTCCSEEEEEEEC---
T ss_pred CCCceEEEeecC-----CccCCCCCEEEEEEECCCCCCcE-----EEEEEecCCCCCcCCccCcccCCCceEEEEEe---
Confidence 567777765332 23899999999953321 12343 12335789999864 2 3578999999987
Q ss_pred eeeeee
Q 006741 406 IVGDYK 411 (633)
Q Consensus 406 ~~G~~~ 411 (633)
.|+|.
T Consensus 92 -tg~Yf 96 (138)
T 3iwv_A 92 -TGKYW 96 (138)
T ss_dssp -HHHHH
T ss_pred -hHHHH
Confidence 55554
No 73
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=29.37 E-value=1.6e+02 Score=28.57 Aligned_cols=64 Identities=19% Similarity=0.229 Sum_probs=40.0
Q ss_pred ceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceEeCcccCCceEEEEEECc
Q 006741 331 RGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSIKNVRQGDYNLYAWIPG 405 (633)
Q Consensus 331 RGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI~nVrpGtY~L~a~~~G 405 (633)
-++++|+|.-.+.-+. ....++-+-|-+.| |. ..+-|.+. ...+|.|+ ..+=.|+|.|..--.|
T Consensus 7 ~a~l~G~iv~tgE~i~---~~~~gv~i~l~e~g----~~--~~~~~~~~-v~qDGtf~-~~lF~G~Yki~~~~nG 70 (202)
T 4fxt_A 7 KATLTGKAIYDGEAVG---VRSGSSEFALFQDG----YA--LKGSIPVY-IAQDGSYS-VSLFNGDYKLVRMGNA 70 (202)
T ss_dssp EEEEEEEEEETTEECB---CCTTTEEEEEECCC----------CCEEEE-BCTTSEEE-EEEESEEEEEEEEETC
T ss_pred CceEEEEEEECCCEee---ecCCceEEEEEEcc----cC--CCCCeeEE-EcCCCcEE-EEEEcceeEEEECCCC
Confidence 4789999973321111 22445677775554 54 22444443 67899999 8999999999954445
No 74
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=28.56 E-value=38 Score=38.32 Aligned_cols=26 Identities=23% Similarity=0.372 Sum_probs=22.7
Q ss_pred EEEeCCccceEeCcccCCceEEEEEE
Q 006741 378 WTKANKRGYFSIKNVRQGDYNLYAWI 403 (633)
Q Consensus 378 wt~td~~G~FtI~nVrpGtY~L~a~~ 403 (633)
|..+.....-+..|++||+|+|.|.+
T Consensus 737 W~~~~~~~~~~ytnL~pG~Y~f~V~a 762 (795)
T 4a2l_A 737 WYYLTDSRTVSYSNLPQGTYQFLVKA 762 (795)
T ss_dssp CEEESSCCEEEEECCCSEEEEEEEEE
T ss_pred ccCCCCcCeEEecccCCCeEEEEEEE
Confidence 77776677889999999999999986
No 75
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=27.95 E-value=17 Score=43.68 Aligned_cols=68 Identities=15% Similarity=0.151 Sum_probs=44.9
Q ss_pred eEEEEEEecCCC-CCccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceee
Q 006741 523 TWRIIFELKHLN-NNGHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNR 601 (633)
Q Consensus 523 ~w~I~F~L~~~~-~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 601 (633)
..+=.|++++.. ......|++.. ......|.|||..+. .-.|-+..++|+|+. .|+.
T Consensus 115 ~Yrr~f~vp~~~~~~~~v~L~F~g---v~~~a~V~vNG~~vG------------------~~~gg~~p~~~DIT~-~lk~ 172 (1032)
T 3oba_A 115 VYARTFELDSKSIESFEHRLRFEG---VDNCYELYVNGQYVG------------------FNKGSRNGAEFDIQK-YVSE 172 (1032)
T ss_dssp EEEEEEEECHHHHHHEEEEEEESC---EESEEEEEETTEEEE------------------EEECTTSCEEEECTT-TCCS
T ss_pred EEEEEEEECchhcCCCEEEEEECC---cceeEEEEECCEEEE------------------EEeCCcccEEEEChh-hccC
Confidence 345678886543 22234455433 345678999997432 112556778999986 6789
Q ss_pred eecEEEEEEee
Q 006741 602 GRNTIYLTQSR 612 (633)
Q Consensus 602 G~NtI~lt~~~ 612 (633)
|+|+|.+.+.+
T Consensus 173 G~N~L~V~V~~ 183 (1032)
T 3oba_A 173 GENLVVVKVFK 183 (1032)
T ss_dssp EEEEEEEEEES
T ss_pred CcEEEEEEEEC
Confidence 99999999965
No 76
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=27.76 E-value=52 Score=29.47 Aligned_cols=15 Identities=20% Similarity=0.330 Sum_probs=13.4
Q ss_pred cccCCceEEEEEECc
Q 006741 391 NVRQGDYNLYAWIPG 405 (633)
Q Consensus 391 nVrpGtY~L~a~~~G 405 (633)
.++||+|+|.|+..|
T Consensus 89 ~~~pG~Ytl~a~l~~ 103 (120)
T 3isy_A 89 VPEPGTYEVKVTFKG 103 (120)
T ss_dssp CCCSEEEEEEEEECC
T ss_pred CCCCccEEEEEEEEe
Confidence 689999999999766
No 77
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=27.24 E-value=25 Score=42.16 Aligned_cols=68 Identities=15% Similarity=0.172 Sum_probs=45.1
Q ss_pred eEEEEEEecCCCC-CccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCceee
Q 006741 523 TWRIIFELKHLNN-NGHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNR 601 (633)
Q Consensus 523 ~w~I~F~L~~~~~-~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 601 (633)
..+-.|.+++... .....|++..+ .....|.|||..+. .-.|-+..++|+|.. .|+.
T Consensus 122 ~Yrr~F~vp~~~~~~~~v~L~F~gv---~~~a~V~vNG~~vG------------------~~~gg~~p~~~DIT~-~L~~ 179 (1023)
T 1jz7_A 122 CYSLTFNVDESWLQEGQTRIIFDGV---NSAFHLWCNGRWVG------------------YGQDSRLPSEFDLSA-FLRA 179 (1023)
T ss_dssp EEEEEEEECHHHHHSSEEEEEESCE---ESEEEEEETTEEEE------------------EEECTTSCEEEECTT-TCCS
T ss_pred EEEEEEEeCchhcCCCEEEEEECCC---CcceEEEECCEEEc------------------cccCCCCceEEecHh-hccC
Confidence 3556788865322 23355665443 34678999997432 012445678899976 7889
Q ss_pred eecEEEEEEee
Q 006741 602 GRNTIYLTQSR 612 (633)
Q Consensus 602 G~NtI~lt~~~ 612 (633)
|+|+|.+.+.+
T Consensus 180 G~N~L~V~V~~ 190 (1023)
T 1jz7_A 180 GENRLAVMVLR 190 (1023)
T ss_dssp EEEEEEEEEES
T ss_pred CCcEEEEEEEe
Confidence 99999999864
No 78
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=27.02 E-value=46 Score=37.42 Aligned_cols=27 Identities=19% Similarity=0.319 Sum_probs=21.4
Q ss_pred EEEeC-CccceEeCcccCCceEEEEEEC
Q 006741 378 WTKAN-KRGYFSIKNVRQGDYNLYAWIP 404 (633)
Q Consensus 378 wt~td-~~G~FtI~nVrpGtY~L~a~~~ 404 (633)
|..++ ....-+..|++||+|+|.|.+.
T Consensus 702 W~~~~~~~~~~~ytnL~pG~Y~f~V~a~ 729 (758)
T 3ott_A 702 WNFLKSNINRITYSNLSYGNYQLIISKL 729 (758)
T ss_dssp CEECCTTCCEEEECSCCSEEEEEEEEEB
T ss_pred ccCCCCCcceEEecCCCCccEEEEEEEe
Confidence 66665 3456899999999999999863
No 79
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=26.23 E-value=60 Score=38.91 Aligned_cols=37 Identities=11% Similarity=0.144 Sum_probs=33.0
Q ss_pred EEEcCCEEEEEECCeEEEEEeCCceeEEEEEECCeecc
Q 006741 8 LNTKHRRLVVMDNGLVQVTLSNPEGEVIGIKYNEIDNV 45 (633)
Q Consensus 8 l~~~g~~~~vidNg~l~~tv~k~~G~itsi~y~G~~nl 45 (633)
++.++.. ++|.++..+++++|.+|.++|++++|++.|
T Consensus 740 ~~~~~~~-~~v~~~~~~~~f~~~~G~l~s~~~~g~~~l 776 (1023)
T 1jz7_A 740 LTTSEMD-FCIELGNKRWQFNRQSGFLSQMWIGDKKQL 776 (1023)
T ss_dssp EEECSSE-EEEEETTEEEEEETTTCSEEEEEETTEECE
T ss_pred ceecCce-EEEEECCEEEEEECCcceEEEEEECCEEee
Confidence 5677788 999999999999999999999999999644
No 80
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=24.10 E-value=66 Score=26.05 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=24.9
Q ss_pred CccceEeCcccCCc-eEEEEEECceeeeee-eeeeEEEe
Q 006741 383 KRGYFSIKNVRQGD-YNLYAWIPGIVGDYK-YSANITVR 419 (633)
Q Consensus 383 ~~G~FtI~nVrpGt-Y~L~a~~~G~~G~~~-~~~~VtV~ 419 (633)
..-.++|.+.+||+ |.+.+.+.-..|+-. ....|+|+
T Consensus 56 ~~t~~~l~~L~p~t~Y~v~V~A~~~~G~gp~ss~p~~~~ 94 (97)
T 3qht_C 56 SSSTATISGLSPGVDYTITVYAYYSYYDLYYSYSPSSIN 94 (97)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEEEEETTEEEECSCEEEE
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEeCCccCCCCCCCEEEe
Confidence 45679999999998 999998643333322 23346655
No 81
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=24.01 E-value=63 Score=26.76 Aligned_cols=28 Identities=21% Similarity=0.278 Sum_probs=16.3
Q ss_pred ccCCceEEEEEECceeeeeeeeeeEEEe
Q 006741 392 VRQGDYNLYAWIPGIVGDYKYSANITVR 419 (633)
Q Consensus 392 VrpGtY~L~a~~~G~~G~~~~~~~VtV~ 419 (633)
-+||+|++++-+.--.+.-.....|+|+
T Consensus 52 ~~~G~YtV~Ltv~~g~~~~~a~~~V~V~ 79 (80)
T 1b4r_A 52 VLPGRYHVTAVLALGAGSALLGTDVQVE 79 (80)
T ss_dssp CSSEEEEEEEEEECSSCEEEEEEEEEEB
T ss_pred CCCcEEEEEEEEEeCCceEEEEEEEEEE
Confidence 3799999988764111222344556665
No 82
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=23.41 E-value=72 Score=27.99 Aligned_cols=15 Identities=13% Similarity=0.465 Sum_probs=13.3
Q ss_pred cccCCceEEEEEECc
Q 006741 391 NVRQGDYNLYAWIPG 405 (633)
Q Consensus 391 nVrpGtY~L~a~~~G 405 (633)
.+.||+|.+.+|++|
T Consensus 27 ~~~PG~Y~vdI~vN~ 41 (125)
T 3bwu_D 27 ELPPGTYRVDIYLNN 41 (125)
T ss_dssp SSCSEEEEEEEEETT
T ss_pred CcCCcEEEEEEEECC
Confidence 478999999999976
No 83
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=22.45 E-value=88 Score=31.46 Aligned_cols=32 Identities=9% Similarity=0.257 Sum_probs=27.5
Q ss_pred EEEECCeEEEEEeCCceeEEEEEE--CCeecccc
Q 006741 16 VVMDNGLVQVTLSNPEGEVIGIKY--NEIDNVLE 47 (633)
Q Consensus 16 ~vidNg~l~~tv~k~~G~itsi~y--~G~~nll~ 47 (633)
++|.|+.++++|..-+|.|+||+. +|.|.|+.
T Consensus 3 ~~l~n~~~~~~i~~~Ga~l~s~~~~~~g~e~l~~ 36 (294)
T 3q1n_A 3 ITIENSKFKAGIAERGAELQSLVNKADNYEYVWT 36 (294)
T ss_dssp EEEECSSEEEEEETBTTEEEEEEETTTTEECBCC
T ss_pred EEEECCCEEEEEEccCcEEEEEEeCCCCCEEEEc
Confidence 889999999999999999999999 47765543
No 84
>3lso_A Putative membrane anchored protein; MCSG, PSI-2, structural genomic protein structure initiative; HET: MLZ; 2.75A {Corynebacterium diphtheriae} PDB: 3lso_B*
Probab=22.30 E-value=38 Score=36.14 Aligned_cols=72 Identities=18% Similarity=0.404 Sum_probs=0.0
Q ss_pred cceeEEEEecCCC--CCCcccccc-cceEEEEeecCCEEEEEEEEeeccccCCCccccceeEEEEEEcCcceeEEE--EE
Q 006741 54 NRGYWDVVWYEPE--KQGSYDKLI-ATDFKVIMQDENQVEVSFTRTWNISLRGSLAPLNVDKRYIMRRGVSGFYFY--AI 128 (633)
Q Consensus 54 ~~GY~d~~w~~~g--~~~~~~~~~-gt~~~vi~~~~~~i~vs~~~~~~~s~~g~~~~~~l~~~~v~r~g~sgiY~y--~i 128 (633)
++||+|-+|+... .+.+|+.++ -|+..|+......|.-.|.-.-+-- +||||| .+
T Consensus 374 ~~~y~dp~w~~es~kpnd~yrgfhs~tsy~v~~~~pqtvta~~eip~~la--------------------pg~ymfqmg~ 433 (489)
T 3lso_A 374 GSGYYDPEWKNESKKPNESYRGFHSDTSYSVVDTSPQTVSAEFEIPKTLA--------------------PGIYMFQMGV 433 (489)
T ss_dssp STTCCCCCTTTSSSCCCTTCEEEEESSCSEECSSSCEEEEEEEECCTTCC--------------------SEEEEEEEEE
T ss_pred CCCccCcccccccCCCcccccccccCceEEEEecCCceEEEEeecCcccC--------------------CceEEEEeee
Q ss_pred eeccCCCC-CCCCcceEE
Q 006741 129 MERKEGWP-DVDMDQIRT 145 (633)
Q Consensus 129 ~~~~~~~p-~~~lge~R~ 145 (633)
|++.+++- .++|.|.-|
T Consensus 434 yky~t~fk~lvsipetaf 451 (489)
T 3lso_A 434 YKYSNSLKDLVSIPETAF 451 (489)
T ss_dssp EETTTTEEEEEEEEEEEE
T ss_pred EEecccccceeeccchhh
No 85
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=21.86 E-value=3.4e+02 Score=22.34 Aligned_cols=67 Identities=16% Similarity=0.169 Sum_probs=35.4
Q ss_pred CCCCCCCCceEEEEEEEEccccccccccccCcc--EEEecCCCCCCcccccCccceeEE-EeCCcc----ceEeCc-ccC
Q 006741 323 VDFPKRNQRGGVFGQLRVHDRYISNRLMWADSA--YVGLAAPGGVGSWERDSKGYQFWT-KANKRG----YFSIKN-VRQ 394 (633)
Q Consensus 323 ~~y~~~~qRGtVsG~l~~sd~~~~~~~~pa~~a--~V~La~~g~~g~~q~~~k~yqywt-~td~~G----~FtI~n-Vrp 394 (633)
+=|-| .| +|.=++.+.|. ...|+... .|.|..|. ++-..-|. .++++| .|.++. ...
T Consensus 11 ~iYrP-Ge--tV~~~~~~~~~----~~~p~~~~~~~v~l~dp~--------g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~ 75 (102)
T 2p9r_A 11 SIYKP-GQ--TVKFRVVSMDE----NFHPLNELIPLVYIQDPK--------GNRIAQWQSFQLEGGLKQFSFPLSSEPFQ 75 (102)
T ss_dssp SEECT-TC--EEEEEEEEECG----GGCBCCCEEEEEEEECTT--------SCEEEEEEEEECBTTEEEEEEECCSSCCC
T ss_pred cccCC-CC--EEEEEEEEECC----CCcCCCCCceEEEEECCC--------CCEEEEEEeecCCCCEEEEEEECCCCCCC
Confidence 34555 23 45555444453 12455433 56665554 23333443 334454 556644 467
Q ss_pred CceEEEEEEC
Q 006741 395 GDYNLYAWIP 404 (633)
Q Consensus 395 GtY~L~a~~~ 404 (633)
|+|+|.++..
T Consensus 76 G~y~i~~~~~ 85 (102)
T 2p9r_A 76 GSYKVVVQKK 85 (102)
T ss_dssp EEEEEEEECT
T ss_pred eeEEEEEEEC
Confidence 9999999953
No 86
>3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A*
Probab=21.13 E-value=1.1e+02 Score=28.04 Aligned_cols=39 Identities=13% Similarity=0.087 Sum_probs=28.5
Q ss_pred cccCccEEEecCCCCCCcccccCcccee----EEEeC-Cc---cceEeCcccCCceE
Q 006741 350 MWADSAYVGLAAPGGVGSWERDSKGYQF----WTKAN-KR---GYFSIKNVRQGDYN 398 (633)
Q Consensus 350 ~pa~~a~V~La~~g~~g~~q~~~k~yqy----wt~td-~~---G~FtI~nVrpGtY~ 398 (633)
..+.++.|.+ |...+..-|. |+-++ .+ |.|+|.|+ |+|-
T Consensus 25 sta~Gt~V~~--------w~~~g~~nQ~~~~~W~~~~~~~~~~g~y~i~n~--G~~L 71 (148)
T 3nbc_A 25 NPAENTLIIG--------HHLNKTPSGYGNQQWTLVQLPHTTIYTMQAVNP--QSYV 71 (148)
T ss_dssp CCSTTEEEEE--------ECCCSTTTCCGGGCEEEEECTTSSEEEEEESSS--CCEE
T ss_pred cCCCCcEEEE--------eCCCCChhheeecEEEEEECCCcccceEEEEEC--CcEE
Confidence 3556777775 6666666777 98776 46 99999999 7653
No 87
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=20.89 E-value=78 Score=25.80 Aligned_cols=22 Identities=9% Similarity=0.182 Sum_probs=18.4
Q ss_pred CccceEeCcccCCc-eEEEEEEC
Q 006741 383 KRGYFSIKNVRQGD-YNLYAWIP 404 (633)
Q Consensus 383 ~~G~FtI~nVrpGt-Y~L~a~~~ 404 (633)
..-.|+|.+++||+ |.+.+.+.
T Consensus 53 ~~t~~~i~~L~p~t~Y~~~V~A~ 75 (100)
T 3b83_A 53 SITSLTLTNLEPNTTYEIRIVAR 75 (100)
T ss_dssp TEEEEEECSCCTTCEEEEEEEEE
T ss_pred cceEEEECCCCCCCEEEEEEEEE
Confidence 44679999999997 99998863
No 88
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=20.86 E-value=57 Score=26.97 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=25.1
Q ss_pred CccceEeCcccCCc-eEEEEEECce--eeeeeeeeeEEEe
Q 006741 383 KRGYFSIKNVRQGD-YNLYAWIPGI--VGDYKYSANITVR 419 (633)
Q Consensus 383 ~~G~FtI~nVrpGt-Y~L~a~~~G~--~G~~~~~~~VtV~ 419 (633)
..-.++|.+.+||+ |.+.+.+.-. .|+-. ...|+|+
T Consensus 62 ~~ts~~l~~L~p~t~Y~~~V~A~~~~~~G~~~-S~p~~~~ 100 (103)
T 3t04_D 62 YYSTATISGLKPGVDYTITVYAYDTFFPGYEP-NSPISIN 100 (103)
T ss_dssp TCCEEEECSCCTTCCEEEEEEEESCCCTTCCC-SCCEEEE
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEeCCCCCCCC-CCCEEEe
Confidence 34679999999999 9999987433 44333 3346655
No 89
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=20.52 E-value=66 Score=32.24 Aligned_cols=28 Identities=11% Similarity=0.261 Sum_probs=25.0
Q ss_pred CEEEEEECCeEEEEEeCCceeEEEEEECC
Q 006741 13 RRLVVMDNGLVQVTLSNPEGEVIGIKYNE 41 (633)
Q Consensus 13 ~~~~vidNg~l~~tv~k~~G~itsi~y~G 41 (633)
.. |+|+|+.|.++|+..+|+|.++.++.
T Consensus 4 ~~-i~v~td~l~~~is~~GG~I~~~~Lk~ 31 (280)
T 3bs6_A 4 KL-ISVKTDVLDLTINTRGGDVEQALLPA 31 (280)
T ss_dssp CE-EEEECSSCEEEEETBTTEEEEEEEEE
T ss_pred CE-EEEECCcEEEEEECCCCeEeeeEcCC
Confidence 45 99999999999999999999997753
No 90
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=20.18 E-value=2.6e+02 Score=27.43 Aligned_cols=62 Identities=15% Similarity=0.222 Sum_probs=39.9
Q ss_pred ceEEEEEEEEccccccccccccCccEEEecCCCCCCcccccCccceeEEEeCCccceEeCcccCCceEEEEE
Q 006741 331 RGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANKRGYFSIKNVRQGDYNLYAW 402 (633)
Q Consensus 331 RGtVsG~l~~sd~~~~~~~~pa~~a~V~La~~g~~g~~q~~~k~yqywt~td~~G~FtI~nVrpGtY~L~a~ 402 (633)
-++++|+|.-.+.-+.- ....++-+-|-+.+ |.. .+-|.+ ....+|.|+ ..+=.|+|.|..-
T Consensus 10 ~a~l~G~iv~tGE~i~~--~~~~gv~i~l~E~g----y~~--~~~~~~-~v~qDGtf~-~~lF~G~Yki~~~ 71 (215)
T 3hn5_A 10 ESMLTGRVMYNGEALQL--RGNEAVQLQLYQHG----YAK--HDPINV-YVNQDGMYS-ANLFDGEYQMITK 71 (215)
T ss_dssp CEEEEEEEEETTEECCC--CCTTSCEEEEESSC----GGG--CCCEEE-EBCTTSEEE-EEECSEEEEEEEC
T ss_pred CceEEEEEEECCCEeee--cCCCceEEEEEEcc----cCC--CCCeeE-EEcCCCcEE-EEEECceeEEEEe
Confidence 47999999733211111 11233677776554 652 244454 367899999 7899999999984
No 91
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=20.13 E-value=38 Score=37.85 Aligned_cols=67 Identities=16% Similarity=0.159 Sum_probs=43.4
Q ss_pred EEEEEEecCC---CCCccEEEEEEecccCCCceEEEEcCCCCCCCCCccccccCCCeeeeeEEEeeeEEEEEEeeCCcee
Q 006741 524 WRIIFELKHL---NNNGHYTLQLALASATDSDLHVRFNNPNADPPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLN 600 (633)
Q Consensus 524 w~I~F~L~~~---~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 600 (633)
.+-+|.+++. .......|++. +....-.|.|||+.+. .-.|-+..++|+|+ ..|+
T Consensus 81 Yr~~f~~p~~~~~~~~~~~~L~f~---gv~~~a~V~vNG~~vg------------------~~~~g~~~~~~dit-~~l~ 138 (613)
T 3hn3_A 81 YEREVILPERWTQDLRTRVVLRIG---SAHSYAIVWVNGVDTL------------------EHEGGYLPFEADIS-NLVQ 138 (613)
T ss_dssp EEEEECCCHHHHHCTTEEEEEEES---CCCSEEEEEETTEEEE------------------EEESSSSCEEEECH-HHHC
T ss_pred EEEEEEeCchhhhcCCCEEEEEEC---CcceEEEEEECCEEEe------------------EEcCCcceEEEECh-hhhc
Confidence 4567888654 11223445554 3456788999997432 01255677899997 6888
Q ss_pred eee----cEEEEEEee
Q 006741 601 RGR----NTIYLTQSR 612 (633)
Q Consensus 601 ~G~----NtI~lt~~~ 612 (633)
.|+ |+|.+.+.+
T Consensus 139 ~g~~~~~n~l~V~v~n 154 (613)
T 3hn3_A 139 VGPLPSRLRITIAINN 154 (613)
T ss_dssp CC---CCEEEEEEEEC
T ss_pred CCCCCcceEEEEEEeC
Confidence 886 999999853
Done!