Query 006743
Match_columns 633
No_of_seqs 559 out of 3019
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 07:46:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006743.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006743hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 4.5E-28 1.6E-32 255.4 27.8 193 1-210 134-331 (344)
2 2ynn_A Coatomer subunit beta'; 100.0 1.9E-27 6.4E-32 243.7 28.5 197 1-214 62-263 (304)
3 2ynn_A Coatomer subunit beta'; 100.0 2.9E-27 1E-31 242.3 28.9 196 1-211 20-218 (304)
4 3ow8_A WD repeat-containing pr 100.0 2.6E-27 9.1E-32 245.8 27.8 190 1-208 129-319 (321)
5 3frx_A Guanine nucleotide-bind 100.0 6E-27 2E-31 242.0 29.2 201 1-209 72-316 (319)
6 4gqb_B Methylosome protein 50; 100.0 5.8E-27 2E-31 247.0 27.7 193 1-210 89-289 (344)
7 1vyh_C Platelet-activating fac 100.0 4.8E-27 1.6E-31 251.7 26.6 205 1-211 115-328 (410)
8 1vyh_C Platelet-activating fac 100.0 1.1E-26 3.7E-31 248.9 28.6 191 1-209 199-410 (410)
9 1got_B GT-beta; complex (GTP-b 100.0 1.3E-26 4.6E-31 241.1 28.0 187 2-207 151-340 (340)
10 4ery_A WD repeat-containing pr 100.0 3.2E-26 1.1E-30 233.1 28.9 195 1-212 30-225 (312)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 1E-26 3.4E-31 242.9 25.6 195 1-209 23-224 (345)
12 4g56_B MGC81050 protein; prote 100.0 8.9E-27 3.1E-31 245.4 25.0 194 1-210 146-343 (357)
13 3ow8_A WD repeat-containing pr 100.0 2.1E-26 7E-31 239.1 26.7 194 1-212 87-281 (321)
14 1got_B GT-beta; complex (GTP-b 99.9 4.6E-26 1.6E-30 237.0 28.4 193 1-211 62-258 (340)
15 2pbi_B Guanine nucleotide-bind 99.9 6.3E-26 2.1E-30 238.3 29.2 190 1-207 161-354 (354)
16 2pm7_B Protein transport prote 99.9 5.2E-26 1.8E-30 232.2 27.4 199 1-210 16-238 (297)
17 4e54_B DNA damage-binding prot 99.9 2.9E-26 9.9E-31 246.5 25.2 199 1-213 126-330 (435)
18 3iz6_a 40S ribosomal protein R 99.9 2.4E-26 8.4E-31 243.1 22.9 196 1-212 73-282 (380)
19 1erj_A Transcriptional repress 99.9 2.1E-25 7E-30 237.0 28.5 195 1-211 71-288 (393)
20 2xzm_R RACK1; ribosome, transl 99.9 3.8E-25 1.3E-29 230.0 29.7 190 1-211 83-286 (343)
21 3frx_A Guanine nucleotide-bind 99.9 1.9E-25 6.4E-30 230.8 26.8 195 1-213 24-230 (319)
22 3f3f_A Nucleoporin SEH1; struc 99.9 1.5E-25 5.1E-30 225.3 25.2 197 1-211 18-338 (351)
23 1erj_A Transcriptional repress 99.9 3.2E-25 1.1E-29 235.5 28.4 196 1-212 130-343 (393)
24 3ei3_B DNA damage-binding prot 99.9 1.2E-24 4.3E-29 227.3 31.9 200 1-215 80-287 (383)
25 3fm0_A Protein CIAO1; WDR39,SG 99.9 4.3E-25 1.5E-29 230.5 28.2 195 1-210 68-283 (345)
26 2pbi_B Guanine nucleotide-bind 99.9 4.3E-25 1.5E-29 232.0 27.9 194 1-211 71-272 (354)
27 3iz6_a 40S ribosomal protein R 99.9 2.3E-25 7.8E-30 235.7 25.6 196 2-210 165-375 (380)
28 2hes_X YDR267CP; beta-propelle 99.9 3.1E-25 1.1E-29 230.2 26.1 194 2-210 22-230 (330)
29 4h5i_A Guanine nucleotide-exch 99.9 1E-25 3.5E-30 238.2 22.1 191 1-209 140-342 (365)
30 2xzm_R RACK1; ribosome, transl 99.9 9.1E-25 3.1E-29 227.2 28.9 189 3-210 35-244 (343)
31 3vl1_A 26S proteasome regulato 99.9 1.4E-25 4.9E-30 236.1 22.8 195 1-211 104-323 (420)
32 3dwl_C Actin-related protein 2 99.9 5.9E-26 2E-30 236.0 19.0 181 1-185 62-269 (377)
33 4ery_A WD repeat-containing pr 99.9 1.9E-24 6.6E-29 220.0 28.6 194 1-211 72-269 (312)
34 3dwl_C Actin-related protein 2 99.9 9.2E-26 3.1E-30 234.6 18.6 199 1-213 18-239 (377)
35 1nr0_A Actin interacting prote 99.9 1.3E-24 4.5E-29 244.7 28.9 197 1-211 66-356 (611)
36 2pm7_B Protein transport prote 99.9 1.2E-24 4.1E-29 222.1 25.8 194 2-209 61-284 (297)
37 3dm0_A Maltose-binding peripla 99.9 1.3E-24 4.6E-29 247.5 28.8 177 1-184 437-619 (694)
38 3jrp_A Fusion protein of prote 99.9 1.2E-24 4E-29 223.7 25.5 200 1-211 18-241 (379)
39 1gxr_A ESG1, transducin-like e 99.9 5E-24 1.7E-28 215.4 29.6 193 1-212 104-298 (337)
40 2hes_X YDR267CP; beta-propelle 99.9 1.4E-24 4.7E-29 225.3 25.7 194 1-209 65-279 (330)
41 3bg1_A Protein SEC13 homolog; 99.9 2.4E-25 8.4E-30 229.6 19.5 200 1-210 20-247 (316)
42 2ymu_A WD-40 repeat protein; u 99.9 1.9E-24 6.7E-29 237.3 26.9 185 1-207 392-577 (577)
43 4g56_B MGC81050 protein; prote 99.9 7.7E-25 2.6E-29 230.6 22.5 193 1-210 101-301 (357)
44 1gxr_A ESG1, transducin-like e 99.9 7.3E-24 2.5E-28 214.2 27.1 189 1-209 148-336 (337)
45 1nr0_A Actin interacting prote 99.9 4.8E-24 1.6E-28 240.2 28.5 197 1-213 25-273 (611)
46 2aq5_A Coronin-1A; WD40 repeat 99.9 3.8E-24 1.3E-28 226.3 25.7 198 1-212 88-301 (402)
47 3zwl_B Eukaryotic translation 99.9 1.3E-23 4.3E-28 214.7 28.1 195 1-213 39-252 (369)
48 2pm9_A Protein WEB1, protein t 99.9 7.2E-24 2.5E-28 221.9 26.5 196 1-211 19-250 (416)
49 1k8k_C P40, ARP2/3 complex 41 99.9 6.9E-24 2.4E-28 218.3 24.3 197 1-213 15-236 (372)
50 4aez_A CDC20, WD repeat-contai 99.9 3.3E-23 1.1E-27 219.7 29.4 192 1-210 141-336 (401)
51 3vl1_A 26S proteasome regulato 99.9 3.1E-24 1.1E-28 225.9 20.8 207 1-212 63-280 (420)
52 3zwl_B Eukaryotic translation 99.9 5.6E-23 1.9E-27 209.9 29.5 194 1-210 81-346 (369)
53 1sq9_A Antiviral protein SKI8; 99.9 6.2E-24 2.1E-28 221.5 22.8 200 4-209 135-394 (397)
54 3i2n_A WD repeat-containing pr 99.9 7.3E-24 2.5E-28 216.4 22.5 196 1-210 124-353 (357)
55 3dw8_B Serine/threonine-protei 99.9 1.5E-23 5.1E-28 222.1 25.1 194 1-210 35-315 (447)
56 3jrp_A Fusion protein of prote 99.9 2.1E-23 7.3E-28 214.2 25.3 196 1-210 62-287 (379)
57 1k8k_C P40, ARP2/3 complex 41 99.9 2.6E-23 9E-28 213.9 25.6 193 1-210 59-274 (372)
58 3dm0_A Maltose-binding peripla 99.9 2.1E-23 7E-28 237.7 27.4 194 1-212 389-594 (694)
59 4gga_A P55CDC, cell division c 99.9 1.1E-22 3.6E-27 217.4 30.3 197 1-213 154-398 (420)
60 3k26_A Polycomb protein EED; W 99.9 6.3E-24 2.2E-28 217.1 19.9 197 1-212 76-320 (366)
61 2ymu_A WD-40 repeat protein; u 99.9 4.5E-23 1.5E-27 226.5 28.1 187 1-208 351-537 (577)
62 3ei3_B DNA damage-binding prot 99.9 2.9E-23 9.9E-28 217.0 25.1 205 1-213 125-342 (383)
63 3mmy_A MRNA export factor; mRN 99.9 2.7E-23 9.2E-28 212.1 23.9 178 1-185 46-333 (368)
64 2j04_B YDR362CP, TAU91; beta p 99.9 1E-23 3.5E-28 235.8 22.5 191 1-209 214-427 (524)
65 3bg1_A Protein SEC13 homolog; 99.9 3.4E-24 1.2E-28 221.0 17.3 192 2-209 65-292 (316)
66 3i2n_A WD repeat-containing pr 99.9 2.3E-23 7.8E-28 212.7 23.3 199 1-212 72-293 (357)
67 2xyi_A Probable histone-bindin 99.9 2.4E-23 8.3E-28 223.7 23.9 196 1-210 135-353 (430)
68 2pm9_A Protein WEB1, protein t 99.9 8.7E-24 3E-28 221.3 19.3 198 1-210 172-414 (416)
69 4aow_A Guanine nucleotide-bind 99.9 1.7E-22 5.8E-27 205.3 27.9 176 1-182 93-271 (340)
70 3k26_A Polycomb protein EED; W 99.9 1.4E-23 4.9E-28 214.5 19.7 194 1-209 122-365 (366)
71 3mkq_A Coatomer beta'-subunit; 99.9 1E-22 3.5E-27 233.0 28.6 180 1-185 20-204 (814)
72 4a11_B DNA excision repair pro 99.9 1.3E-22 4.4E-27 210.6 26.6 199 1-213 50-279 (408)
73 3lrv_A PRE-mRNA-splicing facto 99.9 2.1E-23 7.4E-28 216.5 20.6 191 2-213 44-247 (343)
74 3sfz_A APAF-1, apoptotic pepti 99.9 3.6E-23 1.2E-27 248.9 25.7 151 1-154 622-775 (1249)
75 1r5m_A SIR4-interacting protei 99.9 2.2E-22 7.5E-27 209.5 27.6 193 1-212 52-321 (425)
76 4aez_A CDC20, WD repeat-contai 99.9 2.1E-22 7E-27 213.6 27.9 192 3-212 100-295 (401)
77 1r5m_A SIR4-interacting protei 99.9 2.4E-22 8.2E-27 209.2 27.9 191 1-210 115-361 (425)
78 4ggc_A P55CDC, cell division c 99.9 6.7E-22 2.3E-26 199.0 30.1 193 1-212 74-317 (318)
79 1sq9_A Antiviral protein SKI8; 99.9 5E-23 1.7E-27 214.6 22.4 196 1-213 69-325 (397)
80 4a11_B DNA excision repair pro 99.9 2.6E-22 8.9E-27 208.3 27.5 199 1-214 106-369 (408)
81 2xyi_A Probable histone-bindin 99.9 2.3E-22 7.9E-27 216.1 26.7 197 1-209 188-409 (430)
82 2aq5_A Coronin-1A; WD40 repeat 99.9 1E-22 3.6E-27 215.2 22.8 195 2-212 42-256 (402)
83 4e54_B DNA damage-binding prot 99.9 2.5E-23 8.4E-28 223.7 18.2 207 1-211 171-388 (435)
84 3gre_A Serine/threonine-protei 99.9 9.6E-23 3.3E-27 216.8 22.6 199 1-213 70-295 (437)
85 3gre_A Serine/threonine-protei 99.9 5.5E-23 1.9E-27 218.6 20.7 192 2-207 178-437 (437)
86 3dw8_B Serine/threonine-protei 99.9 6.5E-23 2.2E-27 217.2 21.0 194 1-211 100-374 (447)
87 4aow_A Guanine nucleotide-bind 99.9 6.9E-22 2.4E-26 200.8 27.7 195 1-213 45-249 (340)
88 3lrv_A PRE-mRNA-splicing facto 99.9 2.8E-22 9.5E-27 208.1 24.4 191 2-210 84-292 (343)
89 1yfq_A Cell cycle arrest prote 99.9 1.5E-22 5.2E-27 206.2 22.0 192 1-211 18-226 (342)
90 4gga_A P55CDC, cell division c 99.9 1.6E-21 5.3E-26 208.4 29.0 195 2-211 113-311 (420)
91 3sfz_A APAF-1, apoptotic pepti 99.9 1.3E-21 4.4E-26 235.4 31.5 181 1-186 664-901 (1249)
92 3v7d_B Cell division control p 99.9 6.8E-22 2.3E-26 211.9 25.8 190 2-212 128-343 (464)
93 3jro_A Fusion protein of prote 99.9 2.8E-22 9.4E-27 232.1 24.3 200 1-211 16-239 (753)
94 2vdu_B TRNA (guanine-N(7)-)-me 99.9 6.1E-22 2.1E-26 213.4 24.8 197 1-214 11-275 (450)
95 3v7d_B Cell division control p 99.9 1.7E-21 5.7E-26 208.9 27.8 189 1-211 169-382 (464)
96 2vdu_B TRNA (guanine-N(7)-)-me 99.9 4.8E-22 1.6E-26 214.3 23.3 194 1-208 109-337 (450)
97 3odt_A Protein DOA1; ubiquitin 99.9 6.1E-21 2.1E-25 191.1 26.8 184 5-213 113-299 (313)
98 1yfq_A Cell cycle arrest prote 99.9 1E-21 3.6E-26 200.0 21.4 191 1-212 63-284 (342)
99 2oaj_A Protein SNI1; WD40 repe 99.9 9.5E-22 3.2E-26 232.8 23.4 192 1-212 24-244 (902)
100 3odt_A Protein DOA1; ubiquitin 99.9 5.9E-21 2E-25 191.2 25.6 186 1-212 66-257 (313)
101 1pgu_A Actin interacting prote 99.9 2.2E-21 7.6E-26 213.1 24.3 193 1-213 25-241 (615)
102 1pgu_A Actin interacting prote 99.9 3E-21 1E-25 212.0 24.4 187 2-209 414-613 (615)
103 2j04_B YDR362CP, TAU91; beta p 99.9 8.1E-22 2.8E-26 220.4 20.2 196 3-213 170-389 (524)
104 1p22_A F-BOX/WD-repeat protein 99.9 1.1E-20 3.8E-25 202.3 28.0 181 4-209 181-364 (435)
105 3jro_A Fusion protein of prote 99.9 2.4E-21 8.2E-26 224.2 22.8 196 1-210 60-285 (753)
106 3mkq_A Coatomer beta'-subunit; 99.9 8.6E-21 2.9E-25 217.0 26.7 196 1-213 62-262 (814)
107 1p22_A F-BOX/WD-repeat protein 99.9 1.6E-20 5.3E-25 201.2 26.8 185 2-212 139-327 (435)
108 4gq1_A NUP37; propeller, trans 99.9 1.8E-21 6.3E-26 207.1 18.6 207 2-213 97-351 (393)
109 3vu4_A KMHSV2; beta-propeller 99.9 9.8E-21 3.3E-25 198.8 23.2 192 1-211 26-272 (355)
110 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2.2E-20 7.5E-25 200.1 26.3 187 2-214 125-312 (445)
111 2w18_A PALB2, fancn, partner a 99.9 8.6E-21 3E-25 201.7 22.8 174 15-208 156-355 (356)
112 4gq1_A NUP37; propeller, trans 99.9 2.9E-21 1E-25 205.5 19.2 177 5-185 155-377 (393)
113 4ggc_A P55CDC, cell division c 99.9 6.3E-20 2.2E-24 184.5 27.5 197 1-212 32-232 (318)
114 3vu4_A KMHSV2; beta-propeller 99.9 3E-20 1E-24 195.1 25.2 195 2-210 66-336 (355)
115 2j04_A TAU60, YPL007P, hypothe 99.9 1.5E-20 5E-25 211.3 23.5 184 1-209 92-296 (588)
116 3f3f_A Nucleoporin SEH1; struc 99.9 2.2E-20 7.6E-25 187.5 22.4 121 34-155 8-145 (351)
117 1l0q_A Surface layer protein; 99.9 1E-19 3.5E-24 189.8 26.0 195 1-212 38-235 (391)
118 3mmy_A MRNA export factor; mRN 99.9 4.2E-20 1.4E-24 188.5 22.1 134 21-155 24-162 (368)
119 2j04_A TAU60, YPL007P, hypothe 99.8 1.4E-20 4.8E-25 211.5 19.2 185 1-210 22-254 (588)
120 3bws_A Protein LP49; two-domai 99.8 7.3E-20 2.5E-24 193.6 22.4 204 1-211 176-391 (433)
121 4h5i_A Guanine nucleotide-exch 99.8 4.7E-20 1.6E-24 194.8 20.9 152 1-154 183-344 (365)
122 1l0q_A Surface layer protein; 99.8 4.8E-19 1.6E-23 184.8 27.6 194 1-213 80-278 (391)
123 2ovr_B FBW7, F-BOX/WD repeat p 99.8 3.8E-19 1.3E-23 190.4 26.0 184 5-210 248-442 (445)
124 2oaj_A Protein SNI1; WD40 repe 99.8 1.8E-19 6.1E-24 213.4 25.0 171 1-177 65-281 (902)
125 3bws_A Protein LP49; two-domai 99.8 3.9E-19 1.3E-23 188.0 23.7 193 1-210 129-334 (433)
126 2oit_A Nucleoporin 214KDA; NH2 99.8 9.3E-19 3.2E-23 190.4 17.3 202 1-211 43-279 (434)
127 2hqs_A Protein TOLB; TOLB, PAL 99.8 2E-17 6.7E-22 178.1 26.1 188 1-209 185-386 (415)
128 2w18_A PALB2, fancn, partner a 99.8 2.6E-18 9E-23 182.7 18.9 147 2-151 186-355 (356)
129 2ojh_A Uncharacterized protein 99.7 5.2E-17 1.8E-21 159.7 20.0 202 1-210 48-258 (297)
130 2hqs_A Protein TOLB; TOLB, PAL 99.7 1.8E-16 6.3E-21 170.5 25.1 187 6-210 143-344 (415)
131 2oit_A Nucleoporin 214KDA; NH2 99.7 7.1E-17 2.4E-21 175.6 19.6 199 1-201 99-335 (434)
132 3u4y_A Uncharacterized protein 99.7 1.5E-15 5.1E-20 154.6 26.0 198 1-211 4-208 (331)
133 2ecf_A Dipeptidyl peptidase IV 99.7 1.9E-16 6.5E-21 180.2 19.9 178 1-185 43-303 (741)
134 3vgz_A Uncharacterized protein 99.7 1.4E-15 4.9E-20 155.2 24.0 196 1-211 47-263 (353)
135 1ri6_A Putative isomerase YBHE 99.7 8.4E-16 2.9E-20 155.7 21.9 196 1-210 44-262 (343)
136 2ojh_A Uncharacterized protein 99.7 4E-16 1.4E-20 153.4 18.5 182 1-186 91-290 (297)
137 3vgz_A Uncharacterized protein 99.7 5.3E-15 1.8E-19 151.0 26.4 195 1-212 95-305 (353)
138 3u4y_A Uncharacterized protein 99.7 3.2E-15 1.1E-19 152.2 23.4 197 1-210 90-304 (331)
139 1pby_B Quinohemoprotein amine 99.7 5.5E-15 1.9E-19 149.3 24.8 145 7-154 2-164 (337)
140 1jmx_B Amine dehydrogenase; ox 99.7 4.6E-15 1.6E-19 150.9 21.5 151 1-155 6-177 (349)
141 1ri6_A Putative isomerase YBHE 99.7 2.9E-15 9.9E-20 151.7 19.8 189 7-210 5-209 (343)
142 1nir_A Nitrite reductase; hemo 99.7 6.6E-15 2.3E-19 164.9 24.1 195 1-213 144-358 (543)
143 1xfd_A DIP, dipeptidyl aminope 99.7 7E-16 2.4E-20 174.8 15.7 196 1-210 23-289 (723)
144 1pby_B Quinohemoprotein amine 99.6 3.5E-14 1.2E-18 143.3 23.5 192 1-215 40-315 (337)
145 1nir_A Nitrite reductase; hemo 99.6 4.2E-14 1.4E-18 158.3 26.1 193 1-210 185-402 (543)
146 3hfq_A Uncharacterized protein 99.6 8.1E-14 2.8E-18 143.5 25.1 197 1-209 92-316 (347)
147 3hfq_A Uncharacterized protein 99.6 9.6E-14 3.3E-18 143.0 21.2 195 1-209 46-270 (347)
148 1jmx_B Amine dehydrogenase; ox 99.6 8.2E-14 2.8E-18 141.6 20.1 190 1-213 49-328 (349)
149 2z3z_A Dipeptidyl aminopeptida 99.6 3.2E-14 1.1E-18 161.2 18.2 181 1-185 127-373 (706)
150 1k32_A Tricorn protease; prote 99.6 7.1E-14 2.4E-18 167.0 21.5 175 1-185 302-489 (1045)
151 1xfd_A DIP, dipeptidyl aminope 99.6 5E-14 1.7E-18 159.6 18.8 178 1-184 67-322 (723)
152 3scy_A Hypothetical bacterial 99.6 8.3E-13 2.8E-17 136.9 25.9 194 5-209 108-336 (361)
153 2ecf_A Dipeptidyl peptidase IV 99.6 3.3E-14 1.1E-18 161.8 16.4 179 1-185 158-397 (741)
154 2z3z_A Dipeptidyl aminopeptida 99.6 4.4E-14 1.5E-18 160.0 17.3 189 1-209 88-341 (706)
155 4a5s_A Dipeptidyl peptidase 4 99.5 7.9E-14 2.7E-18 160.5 17.9 196 1-210 23-294 (740)
156 3scy_A Hypothetical bacterial 99.5 1.3E-12 4.4E-17 135.5 24.7 196 1-210 56-291 (361)
157 3o4h_A Acylamino-acid-releasin 99.5 7.8E-14 2.7E-18 155.0 16.4 184 1-208 71-274 (582)
158 1k32_A Tricorn protease; prote 99.5 1.1E-13 3.8E-18 165.3 17.6 198 1-210 251-461 (1045)
159 1jof_A Carboxy-CIS,CIS-muconat 99.5 8.8E-13 3E-17 138.3 21.9 200 1-209 46-290 (365)
160 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.6E-12 5.5E-17 136.3 23.2 198 1-210 89-341 (365)
161 3pe7_A Oligogalacturonate lyas 99.5 1.6E-12 5.6E-17 135.1 22.7 196 1-210 42-273 (388)
162 1z68_A Fibroblast activation p 99.5 7.6E-14 2.6E-18 158.6 13.6 178 1-184 22-269 (719)
163 1q7f_A NHL, brain tumor CG1071 99.5 6.6E-12 2.3E-16 125.8 26.0 190 4-213 87-283 (286)
164 3o4h_A Acylamino-acid-releasin 99.5 3.6E-13 1.2E-17 149.7 18.4 186 1-210 28-227 (582)
165 1z68_A Fibroblast activation p 99.5 4.9E-14 1.7E-18 160.2 10.6 177 1-184 66-328 (719)
166 3fvz_A Peptidyl-glycine alpha- 99.5 4E-12 1.4E-16 131.7 23.5 201 1-210 30-277 (329)
167 4a5s_A Dipeptidyl peptidase 4 99.4 3E-12 1E-16 147.3 18.2 178 2-183 69-334 (740)
168 1q7f_A NHL, brain tumor CG1071 99.4 9.3E-11 3.2E-15 117.4 24.6 189 1-208 36-236 (286)
169 2dg1_A DRP35, lactonase; beta 99.4 1.7E-10 5.9E-15 117.8 26.1 193 1-208 51-261 (333)
170 3pe7_A Oligogalacturonate lyas 99.3 2.6E-11 8.9E-16 125.9 18.5 202 1-210 87-329 (388)
171 3fvz_A Peptidyl-glycine alpha- 99.3 7.9E-11 2.7E-15 121.9 20.6 192 1-209 97-321 (329)
172 3e5z_A Putative gluconolactona 99.3 1.6E-10 5.3E-15 116.8 22.0 187 1-209 34-245 (296)
173 3azo_A Aminopeptidase; POP fam 99.3 2.8E-11 9.6E-16 135.9 17.2 176 2-182 31-256 (662)
174 3azo_A Aminopeptidase; POP fam 99.3 3.4E-11 1.2E-15 135.2 17.3 165 1-173 136-341 (662)
175 3c5m_A Oligogalacturonate lyas 99.3 1.1E-11 3.8E-16 128.4 12.1 198 1-210 42-273 (396)
176 3c5m_A Oligogalacturonate lyas 99.3 2.6E-11 9E-16 125.5 13.7 197 2-210 88-329 (396)
177 2xdw_A Prolyl endopeptidase; a 99.2 3E-10 1E-14 129.9 22.5 190 1-208 131-366 (710)
178 1xip_A Nucleoporin NUP159; bet 99.2 9.8E-11 3.4E-15 126.4 16.5 169 1-185 44-231 (388)
179 2gop_A Trilobed protease; beta 99.2 2.1E-10 7.3E-15 117.4 18.2 177 1-209 65-290 (347)
180 1rwi_B Serine/threonine-protei 99.2 1.2E-09 3.9E-14 107.8 22.4 191 1-210 73-264 (270)
181 3no2_A Uncharacterized protein 99.2 7.9E-10 2.7E-14 112.9 20.4 171 4-185 3-182 (276)
182 2dg1_A DRP35, lactonase; beta 99.2 4.3E-10 1.5E-14 114.9 17.9 188 1-209 12-212 (333)
183 3dsm_A Uncharacterized protein 99.2 9.5E-10 3.3E-14 114.2 20.2 189 2-209 91-301 (328)
184 3no2_A Uncharacterized protein 99.2 2.8E-09 9.5E-14 108.8 22.8 200 2-210 44-261 (276)
185 2bkl_A Prolyl endopeptidase; m 99.2 7.3E-10 2.5E-14 126.5 20.0 192 1-209 127-348 (695)
186 2oiz_A Aromatic amine dehydrog 99.2 1.7E-09 5.9E-14 114.1 21.2 173 1-180 114-360 (361)
187 2oiz_A Aromatic amine dehydrog 99.2 1.8E-09 6E-14 114.1 21.1 189 1-211 56-335 (361)
188 1rwi_B Serine/threonine-protei 99.1 2.6E-09 8.9E-14 105.3 20.3 189 1-209 30-221 (270)
189 3dsm_A Uncharacterized protein 99.1 3E-09 1E-13 110.3 21.4 181 7-209 55-252 (328)
190 2xdw_A Prolyl endopeptidase; a 99.1 6.3E-09 2.2E-13 118.9 24.9 197 1-209 177-413 (710)
191 3e5z_A Putative gluconolactona 99.1 3.4E-09 1.2E-13 106.9 20.0 173 1-184 75-273 (296)
192 2z2n_A Virginiamycin B lyase; 99.1 2.7E-08 9.3E-13 98.6 26.2 187 2-208 64-253 (299)
193 2z2n_A Virginiamycin B lyase; 99.1 3.4E-08 1.2E-12 97.9 26.5 188 2-208 22-211 (299)
194 1qks_A Cytochrome CD1 nitrite 99.1 1.4E-08 4.8E-13 114.6 26.0 187 6-210 167-373 (567)
195 2gop_A Trilobed protease; beta 99.1 5.8E-09 2E-13 106.7 19.8 158 1-177 110-311 (347)
196 1yr2_A Prolyl oligopeptidase; 99.0 6.4E-09 2.2E-13 119.7 20.8 188 1-208 169-391 (741)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 1.9E-08 6.6E-13 101.1 20.7 191 1-209 24-255 (314)
198 1qks_A Cytochrome CD1 nitrite 99.0 1E-07 3.5E-12 107.6 28.0 194 1-210 203-421 (567)
199 2qc5_A Streptogramin B lactona 99.0 1.8E-07 6E-12 92.8 26.4 187 2-208 69-258 (300)
200 2qc5_A Streptogramin B lactona 99.0 2E-07 7E-12 92.3 26.4 188 2-208 27-216 (300)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 6E-08 2.1E-12 97.4 22.1 188 2-209 78-298 (314)
202 2bkl_A Prolyl endopeptidase; m 99.0 1.1E-08 3.6E-13 116.9 18.6 195 1-209 174-396 (695)
203 3hrp_A Uncharacterized protein 98.9 1.7E-07 5.6E-12 101.1 22.1 188 1-208 137-352 (409)
204 2ghs_A AGR_C_1268P; regucalcin 98.9 5.4E-07 1.9E-11 93.2 25.1 186 1-208 55-258 (326)
205 3dr2_A Exported gluconolactona 98.8 1.3E-07 4.5E-12 96.4 19.5 173 1-182 51-253 (305)
206 3g4e_A Regucalcin; six bladed 98.8 6.6E-07 2.3E-11 90.9 24.5 188 1-209 19-228 (297)
207 3g4e_A Regucalcin; six bladed 98.8 5.7E-07 1.9E-11 91.4 23.5 176 1-183 60-257 (297)
208 3hrp_A Uncharacterized protein 98.8 5.9E-07 2E-11 96.7 23.1 191 1-207 177-407 (409)
209 1xip_A Nucleoporin NUP159; bet 98.8 4.6E-08 1.6E-12 105.6 13.9 124 5-140 96-231 (388)
210 1yr2_A Prolyl oligopeptidase; 98.8 4E-07 1.4E-11 104.8 21.9 196 1-209 215-440 (741)
211 2ghs_A AGR_C_1268P; regucalcin 98.7 1.6E-06 5.5E-11 89.7 24.1 170 2-182 97-286 (326)
212 2mad_H Methylamine dehydrogena 98.7 2.5E-06 8.6E-11 90.8 25.8 191 1-214 131-354 (373)
213 2qe8_A Uncharacterized protein 98.7 6.9E-07 2.4E-11 92.9 20.1 180 2-184 74-307 (343)
214 3iuj_A Prolyl endopeptidase; h 98.7 4.5E-07 1.5E-11 103.8 20.2 176 1-185 135-343 (693)
215 2hz6_A Endoplasmic reticulum t 98.7 4.5E-09 1.5E-13 111.5 2.7 143 5-156 8-152 (369)
216 3sjl_D Methylamine dehydrogena 98.6 3.8E-06 1.3E-10 90.5 22.5 147 2-154 40-209 (386)
217 2iwa_A Glutamine cyclotransfer 98.6 4.9E-06 1.7E-10 85.3 22.3 193 1-211 27-238 (266)
218 3iuj_A Prolyl endopeptidase; h 98.6 4.9E-06 1.7E-10 95.2 23.1 194 1-209 181-404 (693)
219 2qe8_A Uncharacterized protein 98.5 8.9E-07 3.1E-11 92.1 14.8 193 1-208 23-276 (343)
220 3dr2_A Exported gluconolactona 98.5 1.3E-06 4.5E-11 88.9 15.8 172 1-184 92-293 (305)
221 2mad_H Methylamine dehydrogena 98.5 1.6E-05 5.5E-10 84.5 24.8 146 1-154 72-244 (373)
222 2ece_A 462AA long hypothetical 98.5 1E-05 3.5E-10 88.7 21.3 192 4-209 93-351 (462)
223 3nol_A Glutamine cyclotransfer 98.5 8.3E-06 2.9E-10 83.3 19.2 171 2-181 50-238 (262)
224 3sjl_D Methylamine dehydrogena 98.4 1.3E-05 4.3E-10 86.4 20.5 194 1-216 143-369 (386)
225 1yiq_A Quinohemoprotein alcoho 98.4 7.1E-06 2.4E-10 94.4 19.6 178 2-181 242-531 (689)
226 3c75_H MADH, methylamine dehyd 98.4 6E-06 2.1E-10 90.0 17.7 196 1-216 183-408 (426)
227 1fwx_A Nitrous oxide reductase 98.4 7.9E-06 2.7E-10 92.2 18.8 192 4-210 99-361 (595)
228 1mda_H Methylamine dehydrogena 98.4 2.6E-06 9E-11 91.1 14.0 172 1-177 71-366 (368)
229 1kb0_A Quinohemoprotein alcoho 98.4 1.2E-05 4.1E-10 92.3 20.4 178 2-181 250-533 (677)
230 1npe_A Nidogen, entactin; glyc 98.3 0.00035 1.2E-08 69.3 27.3 152 1-154 42-199 (267)
231 1npe_A Nidogen, entactin; glyc 98.3 0.00019 6.4E-09 71.3 24.9 187 6-209 1-197 (267)
232 2ece_A 462AA long hypothetical 98.3 3.2E-05 1.1E-09 84.7 20.2 181 2-185 145-398 (462)
233 3nok_A Glutaminyl cyclase; bet 98.3 5.7E-05 1.9E-09 77.3 20.7 166 6-180 65-247 (268)
234 2fp8_A Strictosidine synthase; 98.2 0.00016 5.5E-09 73.9 23.4 177 1-185 25-246 (322)
235 3mbr_X Glutamine cyclotransfer 98.2 0.0002 6.7E-09 72.4 23.1 166 6-179 31-215 (243)
236 1mda_H Methylamine dehydrogena 98.2 2.2E-05 7.4E-10 84.0 16.3 91 17-111 47-157 (368)
237 3c75_H MADH, methylamine dehyd 98.1 9.2E-05 3.1E-09 80.7 20.0 144 4-154 82-249 (426)
238 2hz6_A Endoplasmic reticulum t 98.1 3.6E-07 1.2E-11 96.8 0.7 145 3-155 46-194 (369)
239 1fwx_A Nitrous oxide reductase 98.1 1.2E-05 4E-10 90.9 10.9 178 4-187 145-407 (595)
240 2fp8_A Strictosidine synthase; 98.0 0.00039 1.4E-08 71.0 20.5 188 2-209 87-312 (322)
241 1kb0_A Quinohemoprotein alcoho 98.0 0.00018 6.2E-09 82.5 18.9 195 6-217 174-514 (677)
242 2iwa_A Glutamine cyclotransfer 98.0 0.00061 2.1E-08 69.7 20.7 170 27-216 10-187 (266)
243 3nok_A Glutaminyl cyclase; bet 98.0 0.0005 1.7E-08 70.4 19.8 142 28-176 45-189 (268)
244 2xe4_A Oligopeptidase B; hydro 97.9 0.00042 1.4E-08 80.2 21.5 149 1-153 180-354 (751)
245 1ijq_A LDL receptor, low-densi 97.9 0.0045 1.5E-07 63.7 27.1 185 8-209 3-194 (316)
246 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.00095 3.2E-08 69.2 22.1 143 5-155 52-209 (376)
247 3hxj_A Pyrrolo-quinoline quino 97.9 0.00031 1.1E-08 70.6 17.0 136 6-152 107-243 (330)
248 1yiq_A Quinohemoprotein alcoho 97.9 0.00042 1.4E-08 79.6 19.9 102 15-117 182-343 (689)
249 3qqz_A Putative uncharacterize 97.9 0.0024 8.1E-08 64.8 23.2 181 1-185 33-241 (255)
250 3nol_A Glutamine cyclotransfer 97.9 0.00041 1.4E-08 70.8 17.2 128 28-162 33-163 (262)
251 1ijq_A LDL receptor, low-densi 97.8 0.012 4.1E-07 60.4 28.4 173 2-176 37-217 (316)
252 2p4o_A Hypothetical protein; p 97.8 0.0043 1.5E-07 63.0 24.7 175 1-184 38-228 (306)
253 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.0007 2.4E-08 70.2 18.5 140 6-155 188-339 (376)
254 2ad6_A Methanol dehydrogenase 97.8 0.0009 3.1E-08 75.2 20.3 139 17-156 273-497 (571)
255 3amr_A 3-phytase; beta-propell 97.8 0.003 1E-07 67.1 22.6 192 6-209 40-262 (355)
256 2p4o_A Hypothetical protein; p 97.7 0.0033 1.1E-07 63.9 21.8 178 1-183 78-273 (306)
257 3v65_B Low-density lipoprotein 97.7 0.0078 2.7E-07 63.9 25.5 179 14-209 94-276 (386)
258 3hxj_A Pyrrolo-quinoline quino 97.7 0.00068 2.3E-08 68.1 16.3 175 5-208 147-322 (330)
259 1kv9_A Type II quinohemoprotei 97.7 0.00076 2.6E-08 77.2 18.3 154 2-155 237-490 (668)
260 3mbr_X Glutamine cyclotransfer 97.7 0.0028 9.5E-08 64.0 19.6 128 27-162 10-141 (243)
261 1flg_A Protein (quinoprotein e 97.7 0.0029 9.8E-08 71.3 21.6 140 16-156 291-519 (582)
262 3v64_C Agrin; beta propeller, 97.6 0.013 4.5E-07 61.2 25.1 178 14-208 51-232 (349)
263 3sov_A LRP-6, low-density lipo 97.6 0.0065 2.2E-07 63.0 22.1 180 14-209 11-196 (318)
264 3p5b_L Low density lipoprotein 97.6 0.03 1E-06 59.8 27.2 184 8-208 85-275 (400)
265 2xe4_A Oligopeptidase B; hydro 97.5 0.0016 5.6E-08 75.3 17.6 135 39-177 175-329 (751)
266 3v64_C Agrin; beta propeller, 97.5 0.033 1.1E-06 58.2 26.1 169 2-175 80-253 (349)
267 2p9w_A MAL S 1 allergenic prot 97.5 0.011 3.6E-07 62.4 22.1 152 2-154 20-216 (334)
268 3p5b_L Low density lipoprotein 97.5 0.073 2.5E-06 56.7 28.5 172 2-175 119-298 (400)
269 1k3i_A Galactose oxidase precu 97.4 0.0013 4.4E-08 74.7 15.2 149 3-154 194-379 (656)
270 1w6s_A Methanol dehydrogenase 97.4 0.0075 2.6E-07 68.3 21.1 152 4-156 250-506 (599)
271 3v65_B Low-density lipoprotein 97.4 0.028 9.7E-07 59.5 24.5 188 2-207 123-315 (386)
272 1k3i_A Galactose oxidase precu 97.4 0.0019 6.6E-08 73.2 15.7 181 3-186 251-529 (656)
273 3tc9_A Hypothetical hydrolase; 97.4 0.0052 1.8E-07 66.4 18.0 149 2-153 144-301 (430)
274 3qqz_A Putative uncharacterize 97.3 0.02 6.9E-07 58.0 21.1 142 38-181 27-186 (255)
275 4hw6_A Hypothetical protein, I 97.3 0.012 4.3E-07 63.6 20.6 148 2-153 146-304 (433)
276 1kv9_A Type II quinohemoprotei 97.3 0.0093 3.2E-07 68.1 20.3 148 6-156 66-282 (668)
277 3sov_A LRP-6, low-density lipo 97.3 0.059 2E-06 55.7 24.6 189 2-208 42-236 (318)
278 2ad6_A Methanol dehydrogenase 97.2 0.014 5E-07 65.3 19.7 113 6-120 160-343 (571)
279 3m0c_C LDL receptor, low-densi 97.2 0.083 2.8E-06 61.8 26.6 180 13-208 401-587 (791)
280 2p9w_A MAL S 1 allergenic prot 97.2 0.017 5.8E-07 60.8 18.5 156 41-209 16-214 (334)
281 4a2l_A BT_4663, two-component 97.1 0.067 2.3E-06 61.6 25.4 170 5-183 273-467 (795)
282 3tc9_A Hypothetical hydrolase; 97.1 0.011 3.8E-07 63.8 17.7 138 40-183 139-285 (430)
283 4a2l_A BT_4663, two-component 97.1 0.053 1.8E-06 62.5 23.9 168 9-185 323-515 (795)
284 3m0c_C LDL receptor, low-densi 97.1 0.15 5E-06 59.7 27.1 151 2-154 431-590 (791)
285 1w6s_A Methanol dehydrogenase 97.0 0.021 7.3E-07 64.6 19.4 149 6-156 62-290 (599)
286 1flg_A Protein (quinoprotein e 97.0 0.011 3.7E-07 66.6 15.9 80 59-140 465-547 (582)
287 4a0p_A LRP6, LRP-6, low-densit 96.9 0.21 7.1E-06 56.8 25.8 171 7-183 7-181 (628)
288 3v9f_A Two-component system se 96.8 0.057 2E-06 62.1 21.1 163 8-180 375-551 (781)
289 3sre_A PON1, serum paraoxonase 96.8 0.14 4.8E-06 54.2 22.3 168 14-184 81-283 (355)
290 3s94_A LRP-6, low-density lipo 96.8 0.19 6.5E-06 56.9 24.8 169 12-183 14-186 (619)
291 3kya_A Putative phosphatase; s 96.8 0.082 2.8E-06 58.5 21.0 151 2-153 146-341 (496)
292 3v9f_A Two-component system se 96.8 0.11 3.7E-06 59.8 22.9 168 9-185 420-600 (781)
293 4a0p_A LRP6, LRP-6, low-densit 96.8 0.51 1.7E-05 53.5 27.9 170 2-177 44-217 (628)
294 3kya_A Putative phosphatase; s 96.7 0.037 1.3E-06 61.3 17.4 141 40-182 141-324 (496)
295 2xbg_A YCF48-like protein; pho 96.7 0.16 5.6E-06 52.1 21.4 146 26-178 151-303 (327)
296 4hw6_A Hypothetical protein, I 96.6 0.063 2.2E-06 58.0 18.3 150 2-152 235-432 (433)
297 1n7d_A LDL receptor, low-densi 96.6 0.0083 2.8E-07 69.1 11.6 151 2-154 413-572 (699)
298 3ei3_A DNA damage-binding prot 96.5 0.084 2.9E-06 64.2 20.5 178 16-209 807-998 (1158)
299 1n7d_A LDL receptor, low-densi 96.3 0.0055 1.9E-07 70.5 8.1 180 14-209 384-570 (699)
300 3amr_A 3-phytase; beta-propell 96.2 0.25 8.7E-06 52.3 19.4 138 15-154 98-264 (355)
301 3s94_A LRP-6, low-density lipo 96.2 0.38 1.3E-05 54.4 22.2 152 2-154 47-203 (619)
302 3pbp_A Nucleoporin NUP82; beta 96.2 0.25 8.4E-06 53.8 19.2 141 5-149 31-208 (452)
303 3s25_A Hypothetical 7-bladed b 96.0 0.26 9E-06 50.7 17.9 176 2-201 60-255 (302)
304 2ism_A Putative oxidoreductase 96.0 0.55 1.9E-05 48.9 20.6 141 1-144 37-224 (352)
305 2vpj_A Kelch-like protein 12; 95.8 0.54 1.9E-05 46.7 19.0 144 5-154 62-232 (301)
306 2xbg_A YCF48-like protein; pho 95.8 0.26 8.8E-06 50.6 16.8 143 2-151 170-320 (327)
307 3pbp_A Nucleoporin NUP82; beta 95.8 0.57 1.9E-05 51.0 19.8 128 46-178 29-190 (452)
308 3sre_A PON1, serum paraoxonase 95.7 0.52 1.8E-05 49.8 19.3 161 15-182 138-328 (355)
309 1bpo_A Protein (clathrin); cla 95.5 3.6 0.00012 45.0 26.6 167 2-177 73-310 (494)
310 2ism_A Putative oxidoreductase 95.4 0.46 1.6E-05 49.5 17.5 182 1-185 81-332 (352)
311 2xzh_A Clathrin heavy chain 1; 95.4 3.4 0.00012 43.6 25.3 148 2-155 74-292 (365)
312 3ii7_A Kelch-like protein 7; p 95.3 0.55 1.9E-05 46.9 17.1 143 5-154 55-226 (306)
313 2xn4_A Kelch-like protein 2; s 95.2 0.65 2.2E-05 46.2 17.2 142 5-154 61-230 (302)
314 3a9g_A Putative uncharacterize 94.9 2.6 8.9E-05 43.9 21.3 143 41-185 138-329 (354)
315 3s25_A Hypothetical 7-bladed b 94.5 1.9 6.4E-05 44.2 18.6 161 2-185 21-201 (302)
316 2vpj_A Kelch-like protein 12; 94.4 0.56 1.9E-05 46.6 14.2 141 5-154 112-279 (301)
317 2xn4_A Kelch-like protein 2; s 94.3 0.58 2E-05 46.6 14.1 145 5-154 108-277 (302)
318 3a9g_A Putative uncharacterize 94.3 1 3.5E-05 47.0 16.4 143 38-185 29-215 (354)
319 1tl2_A L10, protein (tachylect 94.3 1.1 3.6E-05 44.8 15.3 135 6-150 4-160 (236)
320 1cru_A Protein (soluble quinop 94.1 1.5 5E-05 47.7 17.6 101 1-101 33-163 (454)
321 3ei3_A DNA damage-binding prot 94.0 13 0.00046 45.1 27.4 147 2-152 469-635 (1158)
322 2g8s_A Glucose/sorbosone dehyd 93.8 0.71 2.4E-05 48.1 14.1 111 1-112 24-173 (353)
323 4asc_A Kelch repeat and BTB do 93.8 1.4 4.8E-05 44.2 15.7 143 4-154 44-222 (315)
324 2zwa_A Leucine carboxyl methyl 93.7 1.6 5.4E-05 49.9 17.8 148 5-155 397-579 (695)
325 3das_A Putative oxidoreductase 93.4 1.6 5.5E-05 45.9 16.0 100 1-100 38-158 (347)
326 3ii7_A Kelch-like protein 7; p 93.4 3.7 0.00013 40.7 18.0 141 8-154 14-179 (306)
327 1zgk_A Kelch-like ECH-associat 93.4 1.2 4.2E-05 44.6 14.4 140 5-154 70-241 (308)
328 3ott_A Two-component system se 93.2 13 0.00046 42.0 24.5 161 8-182 75-246 (758)
329 2woz_A Kelch repeat and BTB do 92.9 2.9 0.0001 41.9 16.5 143 4-154 55-232 (318)
330 4asc_A Kelch repeat and BTB do 92.9 4.4 0.00015 40.5 17.8 139 8-154 7-175 (315)
331 1tl2_A L10, protein (tachylect 92.8 1.5 5.1E-05 43.7 13.6 138 1-147 47-204 (236)
332 3ott_A Two-component system se 92.1 16 0.00055 41.4 23.2 166 8-183 114-294 (758)
333 1zgk_A Kelch-like ECH-associat 92.1 1.3 4.4E-05 44.4 12.5 143 5-154 121-288 (308)
334 2woz_A Kelch repeat and BTB do 92.0 1.6 5.4E-05 43.9 13.2 146 5-154 109-288 (318)
335 2uvk_A YJHT; unknown function, 91.5 6 0.00021 40.1 17.1 94 60-154 168-295 (357)
336 2be1_A Serine/threonine-protei 91.3 0.38 1.3E-05 50.6 7.7 144 6-150 10-181 (339)
337 3sbq_A Nitrous-oxide reductase 91.0 16 0.00056 41.0 20.6 191 4-209 140-407 (638)
338 2xzh_A Clathrin heavy chain 1; 90.8 7.6 0.00026 40.9 16.7 138 59-208 48-187 (365)
339 1cru_A Protein (soluble quinop 90.6 21 0.00072 38.4 21.8 101 39-141 28-162 (454)
340 2g8s_A Glucose/sorbosone dehyd 90.5 4.3 0.00015 42.1 14.9 142 40-184 20-214 (353)
341 2zwa_A Leucine carboxyl methyl 89.7 1.6 5.5E-05 49.9 11.8 149 5-154 451-636 (695)
342 3das_A Putative oxidoreductase 89.0 7.5 0.00026 40.8 15.4 77 77-153 27-116 (347)
343 2uvk_A YJHT; unknown function, 88.8 2 6.9E-05 43.7 10.7 135 16-155 168-344 (357)
344 3sbq_A Nitrous-oxide reductase 88.8 5.6 0.00019 44.7 14.6 113 41-154 326-479 (638)
345 1xi4_A Clathrin heavy chain; a 87.4 12 0.00039 46.7 17.3 92 2-99 73-168 (1630)
346 1suu_A DNA gyrase subunit A; t 86.5 31 0.0011 35.2 20.2 199 4-211 6-232 (312)
347 1bpo_A Protein (clathrin); cla 85.8 14 0.00049 40.3 15.4 138 59-208 47-186 (494)
348 3b7f_A Glycosyl hydrolase, BNR 85.8 34 0.0012 35.2 21.8 139 7-149 23-204 (394)
349 2be1_A Serine/threonine-protei 79.8 8.9 0.0003 40.1 10.7 118 5-125 110-245 (339)
350 3no0_A DNA gyrase subunit A; D 79.6 53 0.0018 32.9 18.0 143 7-153 36-196 (276)
351 1wp5_A Topoisomerase IV; broke 79.0 62 0.0021 33.2 17.0 146 4-153 3-174 (323)
352 3no0_A DNA gyrase subunit A; D 78.3 58 0.002 32.6 18.9 145 5-153 79-246 (276)
353 3b7f_A Glycosyl hydrolase, BNR 77.2 69 0.0024 32.8 17.0 108 39-150 116-259 (394)
354 1zi0_A DNA gyrase subunit A; b 76.8 68 0.0023 32.5 20.9 200 4-212 1-228 (307)
355 4gq2_M Nucleoporin NUP120; bet 73.6 43 0.0015 39.6 15.5 38 83-120 237-274 (950)
356 3uc1_A DNA gyrase subunit A; D 71.7 95 0.0032 31.9 18.0 146 5-153 108-279 (327)
357 3l6v_A GYRA, DNA gyrase subuni 69.4 1.1E+02 0.0039 31.9 22.3 147 4-152 5-179 (370)
358 3uc1_A DNA gyrase subunit A; D 67.3 1.2E+02 0.004 31.2 21.4 114 38-153 96-228 (327)
359 1xi4_A Clathrin heavy chain; a 66.6 37 0.0013 42.3 12.8 139 59-209 47-187 (1630)
360 4hvt_A Ritya.17583.B, post-pro 65.4 1.9E+02 0.0065 33.0 18.1 174 2-178 137-360 (711)
361 2wg3_C Hedgehog-interacting pr 63.1 89 0.003 33.7 14.1 52 82-133 14-79 (463)
362 3l6v_A GYRA, DNA gyrase subuni 60.9 1.6E+02 0.0056 30.7 20.3 146 7-153 58-265 (370)
363 2wg3_C Hedgehog-interacting pr 57.3 1.1E+02 0.0038 32.9 13.6 103 40-142 16-158 (463)
364 1suu_A DNA gyrase subunit A; t 49.8 2.2E+02 0.0075 28.8 19.4 101 52-153 116-231 (312)
365 3kci_A Probable E3 ubiquitin-p 47.9 2.5E+02 0.0085 28.8 21.9 144 7-153 63-241 (389)
366 3zwu_A Alkaline phosphatase PH 41.5 67 0.0023 36.1 8.8 57 84-140 478-548 (592)
367 3q6k_A 43.2 kDa salivary prote 40.5 3.5E+02 0.012 28.4 23.6 162 17-179 124-335 (381)
368 4a9v_A PHOX; hydrolase, beta-p 35.1 1.2E+02 0.0042 34.0 9.5 60 82-141 476-549 (592)
369 4fhn_B Nucleoporin NUP120; pro 34.9 28 0.00095 42.0 4.7 38 83-120 239-276 (1139)
370 1zvt_A Topoisomerase IV subuni 33.2 3.6E+02 0.012 26.4 13.2 101 52-153 4-114 (256)
371 1zi0_A DNA gyrase subunit A; b 32.8 3.9E+02 0.013 26.7 17.8 146 5-153 108-277 (307)
372 3zwu_A Alkaline phosphatase PH 31.5 91 0.0031 35.0 7.8 55 1-55 482-548 (592)
373 1zvt_A Topoisomerase IV subuni 31.2 3.8E+02 0.013 26.2 16.0 143 7-153 3-163 (256)
374 3kci_A Probable E3 ubiquitin-p 30.0 4.6E+02 0.016 26.7 22.2 143 6-153 116-293 (389)
375 3qhy_B Beta-lactamase inhibito 29.3 4.2E+02 0.014 26.0 16.7 133 9-154 36-169 (282)
376 3f7f_A Nucleoporin NUP120; nuc 29.0 67 0.0023 37.0 6.2 37 83-121 223-259 (729)
377 4d9s_A UVB-resistance protein 27.2 5.3E+02 0.018 26.5 23.5 140 7-153 131-305 (406)
378 3mez_B Mannose-specific lectin 24.1 3.3E+02 0.011 23.0 10.3 18 6-23 24-41 (113)
379 1eoq_A GAG polyprotein capsid 21.1 8.8 0.0003 32.8 -2.2 62 495-557 8-91 (96)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=4.5e-28 Score=255.41 Aligned_cols=193 Identities=11% Similarity=0.115 Sum_probs=164.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe--c
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL--K 78 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l--~ 78 (633)
+|+|+|++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|++++..+|++|+.|++|+|||+++.+.. ..+ .
T Consensus 134 ~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~-h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~-~~~~~~ 211 (344)
T 4gqb_B 134 SVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA-HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPA-SQIGCS 211 (344)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCE-EECC--
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-cCCceEEEEecCCCCCceeeecccccccccccccccee-eeeecc
Confidence 4899999999999999999999999999999986 66788999999998778999999999999999988753 333 3
Q ss_pred cCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCC-CEEEEEEcCCeEEEEECCCCC
Q 006743 79 QHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDD-WILTAGTSNGRVVFYDIRGKP 155 (633)
Q Consensus 79 ~H~~~VtsLafSP-dg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG-~~LatGs~DGsV~IWDlrs~~ 155 (633)
.|...+.+++|+| ++++|++|+.|++|++||+++++++..+ .|...|.+++|+|++ ++|++|+.||+|+|||++++
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~- 290 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS- 290 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC-
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-
Confidence 4566899999999 6788999999999999999999988777 589999999999998 57999999999999999887
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 156 k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
..+...+|.+.|++++|+|+++ .++++++.|+.|++|++..
T Consensus 291 ---~~~~~~~H~~~V~~v~~sp~~~-----------~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 291 ---ELFRSQAHRDFVRDATWSPLNH-----------SLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp ---EEEEECCCSSCEEEEEECSSST-----------TEEEEEETTSCEEEEECCC
T ss_pred ---cEEEEcCCCCCEEEEEEeCCCC-----------eEEEEEcCCCeEEEEECCC
Confidence 2334458999999999999643 3455678899999999853
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=1.9e-27 Score=243.75 Aligned_cols=197 Identities=14% Similarity=0.228 Sum_probs=171.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|++++++|++|+.|+.|++||+.+++.+..+.+ |...|.+++|+|++. +|++|+.|++|+|||+++.......+.+|
T Consensus 62 ~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~~h 139 (304)
T 2ynn_A 62 KFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGH 139 (304)
T ss_dssp EEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEECCC
T ss_pred EEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC-CCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhhccc
Confidence 4789999999999999999999999999999986 667889999999998 89999999999999998876566778999
Q ss_pred CCCeEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEec--CCCEEEEEEcCCeEEEEECCCCC
Q 006743 81 SAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFID--DDWILTAGTSNGRVVFYDIRGKP 155 (633)
Q Consensus 81 ~~~VtsLafSP-dg~~LaSgS~DGtVrIWDlrtgk~v~~i--~h~~~ItsLafSP--dG~~LatGs~DGsV~IWDlrs~~ 155 (633)
...|.+++|+| ++.+|++|+.|++|++||++++.....+ .+...+..++|+| ++.+|++|+.||.|++||+++.
T Consensus 140 ~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~- 218 (304)
T 2ynn_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK- 218 (304)
T ss_dssp CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT-
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC-
Confidence 99999999999 7899999999999999999887765554 4667899999987 6789999999999999999987
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCCC
Q 006743 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (633)
Q Consensus 156 k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~~ 214 (633)
+++..+. +|...|.+++|+|+++ ++++++.|+.|++||+......
T Consensus 219 ~~~~~~~--~h~~~v~~~~~~p~~~------------~l~s~s~Dg~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 219 SCVATLE--GHMSNVSFAVFHPTLP------------IIISGSEDGTLKIWNSSTYKVE 263 (304)
T ss_dssp EEEEEEE--CCSSCEEEEEECSSSS------------EEEEEETTSCEEEEETTTCCEE
T ss_pred ccceeeC--CCCCCEEEEEECCCCC------------EEEEEcCCCeEEEEECCCCcee
Confidence 4455555 8999999999999544 5566688999999998765543
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=2.9e-27 Score=242.30 Aligned_cols=196 Identities=12% Similarity=0.125 Sum_probs=170.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++|+.||.|++||+.+++.+..+.. +...|.+++|+++++ +|++|+.|++|+|||+.+++. +..+.+|
T Consensus 20 ~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~-~~~~~~h 96 (304)
T 2ynn_A 20 DFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQV-TETPVRAGKFIARKN-WIIVGSDDFRIRVFNYNTGEK-VVDFEAH 96 (304)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGT-EEEEEETTSEEEEEETTTCCE-EEEEECC
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCceeEEeec-cCCcEEEEEEeCCCC-EEEEECCCCEEEEEECCCCcE-EEEEeCC
Confidence 5899999999999999999999999999988886 567789999999998 899999999999999998874 6778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee-eEe-eCCCCeEEEEEec-CCCEEEEEEcCCeEEEEECCCCCCc
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS-SCI-TYEAPFSSLAFID-DDWILTAGTSNGRVVFYDIRGKPQP 157 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v-~~i-~h~~~ItsLafSP-dG~~LatGs~DGsV~IWDlrs~~k~ 157 (633)
...|++++|+|++++|++|+.|++|++||++++... ..+ .|...|.+++|+| ++.+|++|+.||.|++||++.....
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS
T ss_pred CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc
Confidence 999999999999999999999999999999987443 444 6899999999999 6799999999999999999887544
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 158 v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
..... .|...|..++|.|. .++.++++++.|+.|++||++..
T Consensus 177 ~~~~~--~~~~~v~~~~~~~~----------~~~~~l~s~s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 177 FTLTT--GQERGVNYVDYYPL----------PDKPYMITASDDLTIKIWDYQTK 218 (304)
T ss_dssp EEEEC--CCTTCEEEEEECCS----------TTCCEEEEEETTSEEEEEETTTT
T ss_pred ceecc--CCcCcEEEEEEEEc----------CCCCEEEEEcCCCeEEEEeCCCC
Confidence 33333 57788999999873 25567788899999999998653
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=2.6e-27 Score=245.81 Aligned_cols=190 Identities=17% Similarity=0.277 Sum_probs=170.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++|+.||.|++||+.+++....+.. +...|.+++|+|+++ +|++|+.||.|+|||+++++. +..+.+|
T Consensus 129 ~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~-~~~~v~~~~~spdg~-~lasg~~dg~i~iwd~~~~~~-~~~~~~h 205 (321)
T 3ow8_A 129 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT-RGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKL-LHTLEGH 205 (321)
T ss_dssp EECTTSSEEEEECTTSEEEEEETTTCSEEEEEEC-SSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE-EEEECCC
T ss_pred EECCCCCEEEEEcCCCcEEEEEcCCCceeEEecC-CCceEEEEEECCCCC-EEEEEcCCCeEEEEECCCCcE-EEEEccc
Confidence 4899999999999999999999999998888875 566788999999998 899999999999999998774 6778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~ 159 (633)
...|++++|+|++++|++++.|+.|++||+++++....+ .|...|.+++|+|++.+|++++.||.|+|||+++. +++.
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~-~~~~ 284 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR-TCVH 284 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-EEEE
Confidence 999999999999999999999999999999998887776 58999999999999999999999999999999987 3444
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 160 ~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
.+. +|...|.+++|+|+++ +|++++.|+.|++||.
T Consensus 285 ~~~--~h~~~v~~v~~s~~g~------------~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 285 TFF--DHQDQVWGVKYNGNGS------------KIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEC--CCSSCEEEEEECTTSS------------EEEEEETTCCEEEEEC
T ss_pred EEc--CCCCcEEEEEECCCCC------------EEEEEeCCCeEEEEeC
Confidence 444 7999999999999544 4555678999999996
No 5
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=6e-27 Score=241.97 Aligned_cols=201 Identities=15% Similarity=0.261 Sum_probs=173.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+++|++|++|+.|+.|+|||+.+++.+..+.+ |...|.+++|+|++. +|++|+.|++|+|||++... +..+.+|
T Consensus 72 ~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~~~--~~~~~~h 147 (319)
T 3frx_A 72 TLTADGAYALSASWDKTLRLWDVATGETYQRFVG-HKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKGQC--LATLLGH 147 (319)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSC-EEEEEETTSCEEEEETTSCE--EEEECCC
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCCeeEEEcc-CCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCe--EEEEecc
Confidence 4889999999999999999999999999999987 667789999999988 89999999999999997654 6778899
Q ss_pred CCCeEEEEEcCC------CCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 006743 81 SAPTAGISFSSD------DKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (633)
Q Consensus 81 ~~~VtsLafSPd------g~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs 153 (633)
...|.+++|.|. +.+|++++.|+.|++||+++.+....+ .|...|.+++|+|++++|++|+.||.|+|||+++
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 999999999984 458999999999999999998877665 6999999999999999999999999999999998
Q ss_pred CCCceEEEeecCCCCCeeEEEEccCCCeEEEec-------------------------------------cCCCCeEEEE
Q 006743 154 KPQPLTVLRACSSSEAVSSLCWQRAKPVFIDET-------------------------------------TCKAETALLG 196 (633)
Q Consensus 154 ~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s-------------------------------------~~sd~~lLlS 196 (633)
. +++..+. +...|.+++|+|++.+++++. +..++.+|++
T Consensus 228 ~-~~~~~~~---~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 303 (319)
T 3frx_A 228 K-KAMYTLS---AQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFA 303 (319)
T ss_dssp T-EEEEEEE---CCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEE
T ss_pred C-cEEEEec---CCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEE
Confidence 7 3344443 457899999999988876542 2346677788
Q ss_pred eeCCCeEEccCCC
Q 006743 197 GAVGDSILMPDPL 209 (633)
Q Consensus 197 gs~Dg~IkIWDlr 209 (633)
++.|+.|++||+.
T Consensus 304 g~~Dg~i~vWd~~ 316 (319)
T 3frx_A 304 GYTDNVIRVWQVM 316 (319)
T ss_dssp EETTSCEEEEEEE
T ss_pred eecCceEEEEEEe
Confidence 8888888888763
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.95 E-value=5.8e-27 Score=246.97 Aligned_cols=193 Identities=18% Similarity=0.212 Sum_probs=162.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEe---CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELK---DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~---~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l 77 (633)
+|++++ +|++|+.||.|+|||+.+++.+..+. ..|...|.+|+|+|+++ +|++|+.|++|+|||+.+++. +..+
T Consensus 89 ~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~~~~-~~~~ 165 (344)
T 4gqb_B 89 TWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQQVV-LSSY 165 (344)
T ss_dssp EEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE-EEEE
T ss_pred EEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcE-EEEE
Confidence 478874 78899999999999999887654432 24778899999999998 899999999999999998874 6788
Q ss_pred ccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeEe---eCCCCeEEEEEecC-CCEEEEEEcCCeEEEEECC
Q 006743 78 KQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCI---TYEAPFSSLAFIDD-DWILTAGTSNGRVVFYDIR 152 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg-~~LaSgS~DGtVrIWDlrtgk~v~~i---~h~~~ItsLafSPd-G~~LatGs~DGsV~IWDlr 152 (633)
.+|...|++++|++++ .+|++++.|++|++||++++++...+ .+...+.+++|+|+ +++|++|+.||.|+|||++
T Consensus 166 ~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 166 RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 9999999999999976 58899999999999999999888766 35667999999995 6788999999999999999
Q ss_pred CCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 153 GKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 153 s~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+. +++..+. +|...|++++|+|++ ..+|++++.|+.|+|||+..
T Consensus 246 ~~-~~~~~~~--~h~~~v~~v~fsp~g-----------~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 246 ST-SCVLSSA--VHSQCVTGLVFSPHS-----------VPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp C---CCEEEE--CCSSCEEEEEECSSS-----------SCCEEEEETTSCEEEECTTC
T ss_pred CC-cEEEEEc--CCCCCEEEEEEccCC-----------CeEEEEEeCCCeEEEEECCC
Confidence 87 4555565 899999999999964 23456668899999999854
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=4.8e-27 Score=251.67 Aligned_cols=205 Identities=16% Similarity=0.216 Sum_probs=177.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|++++|++|+.||.|+|||+.+++....+.+ |...|.+++|+|++. +|++|+.|++|+|||+.+.+. +..+.+|
T Consensus 115 ~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~-h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd~~~~~~-~~~~~~h 191 (410)
T 1vyh_C 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-HTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFEC-IRTMHGH 191 (410)
T ss_dssp EECSSSSEEEEEESSSCEEEEETTTCCCCEEECC-CSSCEEEEEECTTSS-EEEEEETTSCCCEEETTSSCE-EECCCCC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-cCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCce-eEEEcCC
Confidence 4899999999999999999999999999999886 667789999999998 899999999999999988774 6778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~ 159 (633)
...|.+++|+|++++|++|+.|++|++||++++.++..+ .|...|.+++|+|++.+|++|+.||.|++||+++.. ...
T Consensus 192 ~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~-~~~ 270 (410)
T 1vyh_C 192 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE-CKA 270 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EEE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-eee
Confidence 999999999999999999999999999999999988777 588999999999999999999999999999999873 334
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEec--------cCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 160 VLRACSSSEAVSSLCWQRAKPVFIDET--------TCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 160 ~l~~~~H~~~VtsLafsPdg~~Las~s--------~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
.+. +|...|.+++|+|++.+..... ....+.++++++.|+.|++||++..
T Consensus 271 ~~~--~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~ 328 (410)
T 1vyh_C 271 ELR--EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328 (410)
T ss_dssp EEC--CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT
T ss_pred Eec--CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC
Confidence 444 7999999999999754422110 1123678999999999999999653
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=1.1e-26 Score=248.91 Aligned_cols=191 Identities=14% Similarity=0.248 Sum_probs=169.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++|+.|+.|++||+.++..+..+.+ |...|.+++|++++. +|++|+.|+.|++||+.+... ...+..|
T Consensus 199 ~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~-~~~~~~h 275 (410)
T 1vyh_C 199 SIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATKEC-KAELREH 275 (410)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCE-EEEECCC
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC-CCccEEEEEECCCCC-EEEEEcCCCeEEEEECCCCce-eeEecCC
Confidence 4889999999999999999999999999999986 667789999999998 899999999999999988774 5678899
Q ss_pred CCCeEEEEEcCC--------------------CCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEE
Q 006743 81 SAPTAGISFSSD--------------------DKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTA 139 (633)
Q Consensus 81 ~~~VtsLafSPd--------------------g~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~Lat 139 (633)
...|.+++|+|+ +.+|++|+.|+.|++||+++++++..+ .|...|.+++|+|++.+|++
T Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s 355 (410)
T 1vyh_C 276 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355 (410)
T ss_dssp SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEE
T ss_pred CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEE
Confidence 999999999995 679999999999999999999888776 68999999999999999999
Q ss_pred EEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 140 GTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 140 Gs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
|+.||.|++||+++. +++..+. +|...|++++|+|++++ +++++.|+.|++||+|
T Consensus 356 ~s~D~~i~vwd~~~~-~~~~~~~--~h~~~v~~l~~~~~~~~------------l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 356 CADDKTLRVWDYKNK-RCMKTLN--AHEHFVTSLDFHKTAPY------------VVTGSVDQTVKVWECR 410 (410)
T ss_dssp EETTTEEEEECCTTS-CCCEEEE--CCSSCEEEEEECSSSSC------------EEEEETTSEEEEEC--
T ss_pred EeCCCeEEEEECCCC-ceEEEEc--CCCCcEEEEEEcCCCCE------------EEEEeCCCcEEEEeCC
Confidence 999999999999876 4456665 79999999999996554 4556789999999975
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=1.3e-26 Score=241.09 Aligned_cols=187 Identities=16% Similarity=0.198 Sum_probs=163.7
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~ 81 (633)
|++++ .+++++.|+.|++||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.|+.|++||+++... ...+.+|.
T Consensus 151 ~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~-~~~~~~h~ 226 (340)
T 1got_B 151 FLDDN-QIVTSSGDTTCALWDIETGQQTTTFTG-HTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMC-RQTFTGHE 226 (340)
T ss_dssp EEETT-EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSE-EEEECCCS
T ss_pred ECCCC-cEEEEECCCcEEEEECCCCcEEEEEcC-CCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCee-EEEEcCCc
Confidence 45554 588999999999999999999988886 667788999999997 899999999999999988774 67788999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCC---CCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 006743 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYE---APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (633)
Q Consensus 82 ~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~---~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v 158 (633)
..|++++|+|++++|++|+.|++|++||+++++.+..+.+. ..|.+++|+|+|.+|++|+.||.|++||+.+.. .+
T Consensus 227 ~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~-~~ 305 (340)
T 1got_B 227 SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD-RA 305 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-EE
T ss_pred CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc-Ee
Confidence 99999999999999999999999999999998887776543 479999999999999999999999999998873 44
Q ss_pred EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccC
Q 006743 159 TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (633)
Q Consensus 159 ~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWD 207 (633)
..+. +|.+.|.+++|+|++.+ |++++.|+.|++||
T Consensus 306 ~~~~--~h~~~v~~~~~s~dg~~------------l~s~s~D~~i~iWd 340 (340)
T 1got_B 306 GVLA--GHDNRVSCLGVTDDGMA------------VATGSWDSFLKIWN 340 (340)
T ss_dssp EEEE--CCSSCEEEEEECTTSSC------------EEEEETTSCEEEEC
T ss_pred eEee--cCCCcEEEEEEcCCCCE------------EEEEcCCccEEecC
Confidence 5555 89999999999996555 45557799999997
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=3.2e-26 Score=233.11 Aligned_cols=195 Identities=20% Similarity=0.271 Sum_probs=170.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++|+.||.|++|++.+++....+.+ |...|.+++|+|+++ +|++|+.|+.|++||+.+.+. +..+.+|
T Consensus 30 ~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~~~d~~i~vwd~~~~~~-~~~~~~~ 106 (312)
T 4ery_A 30 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKC-LKTLKGH 106 (312)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCE-EEEEECC
T ss_pred EECCCCCEEEEeeCCCeEEEEeCCCcccchhhcc-CCCceEEEEEcCCCC-EEEEECCCCEEEEEECCCCcE-EEEEcCC
Confidence 4899999999999999999999999998888876 667789999999997 899999999999999998874 6778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~ 159 (633)
...|.+++|+|++++|++|+.|+.|++||+++++.+..+ .|...|.+++|+|++.+|++++.||.|++||+++... +.
T Consensus 107 ~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~ 185 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LK 185 (312)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-EE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce-ee
Confidence 999999999999999999999999999999999888777 5888999999999999999999999999999998743 33
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 160 ~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
.+. ..+...+.+++|+|++++ +++++.|+.|++||++...
T Consensus 186 ~~~-~~~~~~~~~~~~~~~~~~------------l~~~~~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 186 TLI-DDDNPPVSFVKFSPNGKY------------ILAATLDNTLKLWDYSKGK 225 (312)
T ss_dssp EEC-CSSCCCEEEEEECTTSSE------------EEEEETTTEEEEEETTTTE
T ss_pred EEe-ccCCCceEEEEECCCCCE------------EEEEcCCCeEEEEECCCCc
Confidence 332 256778999999996554 4555779999999986543
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=1e-26 Score=242.86 Aligned_cols=195 Identities=13% Similarity=0.189 Sum_probs=163.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeE--EEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc-eeEEe
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAA--ELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP-KVSWL 77 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~--~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~-~v~~l 77 (633)
+|+|+|++||+|+.|+.|+|||+.++.... .+...|...|.+++|+|+++ +|++|+.|++|+|||+..... .+..+
T Consensus 23 ~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~s~D~~v~iw~~~~~~~~~~~~~ 101 (345)
T 3fm0_A 23 AWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN-YLASASFDATTCIWKKNQDDFECVTTL 101 (345)
T ss_dssp EECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECCC-EEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC-EEEEEECCCcEEEEEccCCCeEEEEEc
Confidence 589999999999999999999998876443 23345778899999999998 899999999999999977642 35678
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce---eeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 006743 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP---SSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~---v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs 153 (633)
.+|...|.+++|+|++++|++|+.|++|++||++++.. +..+ .|...|.+++|+|++.+|++|+.|+.|++||.+.
T Consensus 102 ~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~ 181 (345)
T 3fm0_A 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEE 181 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEET
T ss_pred cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecC
Confidence 89999999999999999999999999999999987643 3333 5889999999999999999999999999999987
Q ss_pred CCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 154 KPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 154 ~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
.. ........+|...|++++|+|++++ |++++.|+.|++||+.
T Consensus 182 ~~-~~~~~~~~~h~~~v~~l~~sp~g~~------------l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 182 DD-WVCCATLEGHESTVWSLAFDPSGQR------------LASCSDDRTVRIWRQY 224 (345)
T ss_dssp TE-EEEEEEECCCSSCEEEEEECTTSSE------------EEEEETTSCEEEEEEE
T ss_pred CC-EEEEEEecCCCCceEEEEECCCCCE------------EEEEeCCCeEEEeccc
Confidence 53 2222333489999999999996544 5556789999999864
No 12
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=8.9e-27 Score=245.35 Aligned_cols=194 Identities=12% Similarity=0.156 Sum_probs=167.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee-EEecc
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV-SWLKQ 79 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v-~~l~~ 79 (633)
+|+|+|++|++|+.||.|++||+.+++.+..+.+ |...|.+++|+++++.++++++.||.|+|||+++.+... .....
T Consensus 146 ~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~ 224 (357)
T 4g56_B 146 SVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA-HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCA 224 (357)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTT
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecc
Confidence 4899999999999999999999999999999986 667889999999987789999999999999998876432 22346
Q ss_pred CCCCeEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCC-CEEEEEEcCCeEEEEECCCCCC
Q 006743 80 HSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDD-WILTAGTSNGRVVFYDIRGKPQ 156 (633)
Q Consensus 80 H~~~VtsLafSPd-g~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG-~~LatGs~DGsV~IWDlrs~~k 156 (633)
|...|.+++|+|+ +.+|++|+.|+.|++||+++++++..+ .|...|.+++|+|++ ++|++|+.||+|+|||++++
T Consensus 225 ~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-- 302 (357)
T 4g56_B 225 SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-- 302 (357)
T ss_dssp CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC--
T ss_pred ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC--
Confidence 7788999999995 678999999999999999999888777 588999999999987 67899999999999999887
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 157 ~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+.+...+|.+.|++++|+|. ++.+|++++.|+.|++||+..
T Consensus 303 --~~~~~~~H~~~V~~vafsP~-----------d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 303 --EVFRDLSHRDFVTGVAWSPL-----------DHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp --EEEEECCCSSCEEEEEECSS-----------STTEEEEEETTSCEEEEECC-
T ss_pred --cEeEECCCCCCEEEEEEeCC-----------CCCEEEEEcCCCeEEEEECCC
Confidence 33444589999999999983 345566778899999999854
No 13
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.95 E-value=2.1e-26 Score=239.11 Aligned_cols=194 Identities=18% Similarity=0.232 Sum_probs=170.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|++++.++++++.|+.|++||+.+++.+..+.. +...+.+++|+|+++ +|++|+.||.|++||+...+. ...+..|
T Consensus 87 ~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~-~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~~~-~~~~~~~ 163 (321)
T 3ow8_A 87 DISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA-GPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESGKK-EYSLDTR 163 (321)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTCSE-EEEEECS
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeC-CCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCCce-eEEecCC
Confidence 3788999999999999999999999999988886 445567799999998 899999999999999998874 5667788
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~ 159 (633)
...|.+++|+|++++|++|+.|+.|++||+++++.+..+ .|...|.+++|+|++.+|++|+.||.|+|||++... ...
T Consensus 164 ~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~-~~~ 242 (321)
T 3ow8_A 164 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN-LAG 242 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC-EEE
T ss_pred CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc-eeE
Confidence 999999999999999999999999999999999988777 588999999999999999999999999999999873 344
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 160 ~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
.+. +|...|.+++|+|+++ +|++++.|+.|++||++...
T Consensus 243 ~~~--~h~~~v~~~~~sp~~~------------~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 243 TLS--GHASWVLNVAFCPDDT------------HFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp EEC--CCSSCEEEEEECTTSS------------EEEEEETTSCEEEEETTTTE
T ss_pred EEc--CCCCceEEEEECCCCC------------EEEEEeCCCcEEEEeCCCCE
Confidence 444 8999999999999544 45566789999999997543
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=4.6e-26 Score=237.04 Aligned_cols=193 Identities=15% Similarity=0.216 Sum_probs=168.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC---ceeEEe
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---PKVSWL 77 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~---~~v~~l 77 (633)
+|++++++|++|+.||.|+|||+.+++.+..+.. +...|.+++|+|+++ +|++|+.|+.|++||+.+.. .....+
T Consensus 62 ~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~s~~~d~~v~iw~~~~~~~~~~~~~~~ 139 (340)
T 1got_B 62 HWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCAYAPSGN-YVACGGLDNICSIYNLKTREGNVRVSREL 139 (340)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-SSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTCSBSCEEEEEE
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCCcceEeec-CCccEEEEEECCCCC-EEEEEeCCCeEEEEECccCCCcceeEEEe
Confidence 4899999999999999999999999999988886 567788999999998 89999999999999997654 234567
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC
Q 006743 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k 156 (633)
.+|...|.++.|++++. +++++.|++|++||+++++.+..+ .|...|.+++|+|++.+|++|+.||.|++||+++. .
T Consensus 140 ~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~-~ 217 (340)
T 1got_B 140 AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG-M 217 (340)
T ss_dssp ECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-S
T ss_pred cCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-e
Confidence 89999999999998764 899999999999999999888777 58999999999999999999999999999999987 3
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 157 ~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
+...+. +|...|.+++|+|+++ ++++++.|+.|++||++..
T Consensus 218 ~~~~~~--~h~~~v~~v~~~p~~~------------~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 218 CRQTFT--GHESDINAICFFPNGN------------AFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp EEEEEC--CCSSCEEEEEECTTSS------------EEEEEETTSCEEEEETTTT
T ss_pred eEEEEc--CCcCCEEEEEEcCCCC------------EEEEEcCCCcEEEEECCCC
Confidence 444444 7999999999999654 4556678999999999753
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=6.3e-26 Score=238.31 Aligned_cols=190 Identities=18% Similarity=0.222 Sum_probs=165.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCC-CeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNS-RHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg-~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
+|++++++|++++.||.|++||+++++.+..+.+ |...|.+++|+|+. .++|++|+.||.|++||+++++. +..+..
T Consensus 161 ~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~-~~~~~~ 238 (354)
T 2pbi_B 161 SFTNSDMQILTASGDGTCALWDVESGQLLQSFHG-HGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC-VQAFET 238 (354)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE-EEEECC
T ss_pred EEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC-CCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE-EEEecC
Confidence 4789999999999999999999999999999987 56678889998852 24899999999999999998874 677889
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeC---CCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC
Q 006743 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (633)
Q Consensus 80 H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h---~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k 156 (633)
|...|++++|+|++++|++|+.|++|++||++.++.+..+.. ...+.+++|+|++.+|++|+.|+.|++||+.++.
T Consensus 239 h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~- 317 (354)
T 2pbi_B 239 HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS- 317 (354)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-
T ss_pred CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc-
Confidence 999999999999999999999999999999999887766642 3478999999999999999999999999998873
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccC
Q 006743 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (633)
Q Consensus 157 ~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWD 207 (633)
.+..+. +|...|++++|+|++++| ++++.|+.|++|+
T Consensus 318 ~~~~l~--~h~~~v~~l~~spdg~~l------------~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 318 RVSILF--GHENRVSTLRVSPDGTAF------------CSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEEC--CCSSCEEEEEECTTSSCE------------EEEETTSEEEEEC
T ss_pred eEEEEE--CCCCcEEEEEECCCCCEE------------EEEcCCCCEEecC
Confidence 344444 899999999999966554 5557799999996
No 16
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=5.2e-26 Score=232.23 Aligned_cols=199 Identities=11% Similarity=0.169 Sum_probs=163.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCC--ceeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ceeE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASG--AKAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKVS 75 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tg--k~v~~~~~~~~~~VssLafSpd--g~~lLaSGs~DGtI~IWDl~t~~-~~v~ 75 (633)
+|+++|++||+|+.|+.|+|||+... +.+..+.+ |...|.+++|+++ +. +|++|+.|++|+|||+.++. ..+.
T Consensus 16 ~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~g-H~~~V~~v~~s~~~~g~-~l~s~s~D~~v~iWd~~~~~~~~~~ 93 (297)
T 2pm7_B 16 VMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGT-ILASCSYDGKVMIWKEENGRWSQIA 93 (297)
T ss_dssp EECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECC-CSSCEEEEEECCGGGCS-EEEEEETTTEEEEEEBSSSCBCCCE
T ss_pred EECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcc-ccCCeEEEEecCCCcCC-EEEEEcCCCEEEEEEcCCCceEEEE
Confidence 58999999999999999999999743 56777776 6778999999864 55 89999999999999998764 2355
Q ss_pred EeccCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCce---eeEeeCCCCeEEEEEecC-------------CCEE
Q 006743 76 WLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRP---SSCITYEAPFSSLAFIDD-------------DWIL 137 (633)
Q Consensus 76 ~l~~H~~~VtsLafSPd--g~~LaSgS~DGtVrIWDlrtgk~---v~~i~h~~~ItsLafSPd-------------G~~L 137 (633)
.+..|...|.+++|+|+ +.+|++++.|+.|++||++++.. .....|...|.+++|+|+ +++|
T Consensus 94 ~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l 173 (297)
T 2pm7_B 94 VHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (297)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEE
T ss_pred EeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceE
Confidence 67889999999999996 89999999999999999987632 223368999999999997 5799
Q ss_pred EEEEcCCeEEEEECCCCCCceEE-EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 138 TAGTSNGRVVFYDIRGKPQPLTV-LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 138 atGs~DGsV~IWDlrs~~k~v~~-l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
++|+.|+.|+|||+++....... ....+|...|.+++|+|++ ..+.++++++.|+.|++||+..
T Consensus 174 ~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~---------~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV---------LLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC---------SSSEEEEEEETTSCEEEEEESS
T ss_pred EEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC---------CCceEEEEEECCCcEEEEEeCC
Confidence 99999999999999876432211 2233899999999999953 1246778889999999999854
No 17
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=2.9e-26 Score=246.52 Aligned_cols=199 Identities=13% Similarity=0.112 Sum_probs=160.1
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEEe-CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 006743 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (633)
Q Consensus 1 AFSp-dG~~LaSgs~DG~I~IWDl~tgk~v~~~~-~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~ 78 (633)
+|+| ++++||+|+.||.|+|||+.+++....+. ..|...|.+|+|+|.+.++|++|+.||+|+|||+++... ..+.
T Consensus 126 ~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~--~~~~ 203 (435)
T 4e54_B 126 AWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL--RVFA 203 (435)
T ss_dssp EECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE--EEEE
T ss_pred EEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce--eEEe
Confidence 5888 56799999999999999998776555443 236778999999985444899999999999999987652 2222
Q ss_pred ---cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCC-EEEEEEcCCeEEEEECCCC
Q 006743 79 ---QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDW-ILTAGTSNGRVVFYDIRGK 154 (633)
Q Consensus 79 ---~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~-~LatGs~DGsV~IWDlrs~ 154 (633)
.+...+.+++|+|++++|++|+.||.|++||++.........|...|.+++|+|++. +|++|+.|+.|+|||+++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~ 283 (435)
T 4e54_B 204 SSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQV 283 (435)
T ss_dssp CCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTC
T ss_pred ccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccc
Confidence 334568899999999999999999999999998655444457999999999999875 7889999999999999986
Q ss_pred CCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 155 PQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 155 ~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
..........+|...|++++|+|++. +|++++.|+.|++||++....
T Consensus 284 ~~~~~~~~~~~h~~~v~~~~~spdg~------------~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 284 RGKASFLYSLPHRHPVNAACFSPDGA------------RLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp CSSSCCSBCCBCSSCEEECCBCTTSS------------EEEEEESSSCEEEEESSSSSS
T ss_pred cccceEEEeeeccccccceeECCCCC------------eeEEEcCCCEEEEEECCCCcc
Confidence 54434444457999999999999654 455567899999999976544
No 18
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=2.4e-26 Score=243.09 Aligned_cols=196 Identities=14% Similarity=0.188 Sum_probs=168.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC------cee
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS------PKV 74 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~------~~v 74 (633)
+|+|+|++|++|+.||+|+|||+.+++....+.. |...|.+++|+|+++ +|++|+.|+.|+|||+.... ...
T Consensus 73 ~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~-h~~~v~~~~~s~~g~-~las~~~d~~v~iw~~~~~~~~~~~~~~~ 150 (380)
T 3iz6_a 73 DWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL-HCPWVMECAFAPNGQ-SVACGGLDSACSIFNLSSQADRDGNMPVS 150 (380)
T ss_dssp EECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-CCTTCCCCEECTTSS-EEEECCSSSCCEEEECCCCSSCCCSSTTC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCccceEEec-CCCCEEEEEECCCCC-EEEEeeCCCcEEEEECCCCccccCCccce
Confidence 4899999999999999999999999999998887 556678899999998 89999999999999996432 224
Q ss_pred EEeccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeEe------eCCCCeEEEEEec-CCCEEEEEEcCCeE
Q 006743 75 SWLKQHSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCI------TYEAPFSSLAFID-DDWILTAGTSNGRV 146 (633)
Q Consensus 75 ~~l~~H~~~VtsLafSPd-g~~LaSgS~DGtVrIWDlrtgk~v~~i------~h~~~ItsLafSP-dG~~LatGs~DGsV 146 (633)
..+.+|...|.+++|.|+ +..|++|+.|++|++||+++++.+..+ .|...|.+++|++ ++.+|++|+.||.|
T Consensus 151 ~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v 230 (380)
T 3iz6_a 151 RVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTV 230 (380)
T ss_dssp CBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCE
T ss_pred eeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeE
Confidence 567899999999999994 667999999999999999999887665 4778899999987 88999999999999
Q ss_pred EEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 147 VFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 147 ~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
++||++....++..+. +|.+.|.+++|+|+++ ++++++.|+.|++||++...
T Consensus 231 ~~wd~~~~~~~~~~~~--~h~~~v~~v~~~p~~~------------~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 231 RLWDLRITSRAVRTYH--GHEGDINSVKFFPDGQ------------RFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp EEEETTTTCCCCEEEC--CCSSCCCEEEECTTSS------------EEEEECSSSCEEEEETTTTE
T ss_pred EEEECCCCCcceEEEC--CcCCCeEEEEEecCCC------------eEEEEcCCCeEEEEECCCCc
Confidence 9999986656666666 8999999999999654 45566789999999997543
No 19
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=2.1e-25 Score=237.04 Aligned_cols=195 Identities=18% Similarity=0.280 Sum_probs=166.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCC-----------------CCcEEEEEEccCCCeEEEEEeCCCeEE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPN-----------------EQVLRVLDYSRNSRHLLVTAGDDGTLH 63 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~-----------------~~~VssLafSpdg~~lLaSGs~DGtI~ 63 (633)
+|+|||++||+|+ ++.++||++.+++.+..+..+. ...|.+++|+|+++ +|++|+.|+.|+
T Consensus 71 ~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~s~~~d~~i~ 148 (393)
T 1erj_A 71 KFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK-FLATGAEDRLIR 148 (393)
T ss_dssp EECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS-EEEEEETTSCEE
T ss_pred EECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC-EEEEEcCCCeEE
Confidence 4899999999976 7899999999999888776432 12488999999998 899999999999
Q ss_pred EEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEec-CCCEEEEEEc
Q 006743 64 LWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFID-DDWILTAGTS 142 (633)
Q Consensus 64 IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSP-dG~~LatGs~ 142 (633)
|||+.+.+. +..+.+|...|++++|+|++++|++++.|++|++||++++++...+.+...+.+++|+| ++++|++|+.
T Consensus 149 iwd~~~~~~-~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 149 IWDIENRKI-VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp EEETTTTEE-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEET
T ss_pred EEECCCCcE-EEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcC
Confidence 999988764 67789999999999999999999999999999999999999888888889999999999 8999999999
Q ss_pred CCeEEEEECCCCCCceEEEe-----ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 143 NGRVVFYDIRGKPQPLTVLR-----ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 143 DGsV~IWDlrs~~k~v~~l~-----~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
||.|++||+++.. .+..+. ..+|...|.+++|+|+++ ++++++.|+.|++||++..
T Consensus 228 d~~v~iwd~~~~~-~~~~~~~~~~~~~~h~~~v~~v~~~~~g~------------~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 228 DRAVRVWDSETGF-LVERLDSENESGTGHKDSVYSVVFTRDGQ------------SVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp TSCEEEEETTTCC-EEEEEC------CCCSSCEEEEEECTTSS------------EEEEEETTSEEEEEEC---
T ss_pred CCcEEEEECCCCc-EEEeecccccCCCCCCCCEEEEEECCCCC------------EEEEEeCCCEEEEEECCCC
Confidence 9999999999873 333331 137999999999999654 4556678999999999753
No 20
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.94 E-value=3.8e-25 Score=230.03 Aligned_cols=190 Identities=15% Similarity=0.244 Sum_probs=157.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec--
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-- 78 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~-- 78 (633)
+|+|++.+|++|+.|+.|++||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.|++|++||+.... .....
T Consensus 83 ~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~~~--~~~~~~~ 158 (343)
T 2xzm_R 83 ALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVG-HQSEVYSVAFSPDNR-QILSAGAEREIKLWNILGEC--KFSSAEK 158 (343)
T ss_dssp EECSSTTEEEEEETTSEEEEEETTSSCEEEEEEC-CCSCEEEEEECSSTT-EEEEEETTSCEEEEESSSCE--EEECCTT
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcC-CCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccCCc--eeeeecc
Confidence 4789999999999999999999999999999886 667789999999998 89999999999999998443 22222
Q ss_pred -cCCCCeEEEEEcCCC----------CEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeE
Q 006743 79 -QHSAPTAGISFSSDD----------KIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRV 146 (633)
Q Consensus 79 -~H~~~VtsLafSPdg----------~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV 146 (633)
.|...|.+++|+|++ .+|++++.|+.|++||.. .+....+ .|...|.+++|+|+|++|++|+.||.|
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v 237 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKL 237 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred cCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCCEEEEEcCCCeE
Confidence 788999999999976 799999999999999954 4444444 689999999999999999999999999
Q ss_pred EEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 147 VFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 147 ~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
++||++....+...+. +...|.+++|+|+++++++ +.|+.|++||+...
T Consensus 238 ~iwd~~~~~~~~~~~~---~~~~v~~v~~sp~~~~la~-------------~~d~~v~iw~~~~~ 286 (343)
T 2xzm_R 238 LIWDILNLTYPQREFD---AGSTINQIAFNPKLQWVAV-------------GTDQGVKIFNLMTQ 286 (343)
T ss_dssp EEEESSCCSSCSEEEE---CSSCEEEEEECSSSCEEEE-------------EESSCEEEEESSSC
T ss_pred EEEECCCCcccceeec---CCCcEEEEEECCCCCEEEE-------------ECCCCEEEEEeCCC
Confidence 9999966545544443 5567999999997554432 34778888887643
No 21
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=1.9e-25 Score=230.75 Aligned_cols=195 Identities=12% Similarity=0.151 Sum_probs=163.9
Q ss_pred CccCCC-CEEEEEECCCcEEEEECCCC-----ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 006743 1 MYNCKD-EHLASISLSGDLILHNLASG-----AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (633)
Q Consensus 1 AFSpdG-~~LaSgs~DG~I~IWDl~tg-----k~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v 74 (633)
+|++++ ++|++|+.|+.|++||+... ..+..+.+ |...|.+++|+++++ +|++|+.|++|+|||+.+++. +
T Consensus 24 ~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~dg~-~l~s~s~D~~v~~wd~~~~~~-~ 100 (319)
T 3frx_A 24 ATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG-HSHIVQDCTLTADGA-YALSASWDKTLRLWDVATGET-Y 100 (319)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-E
T ss_pred EccCCCccEEEEecCCccEEEecCCCCCccccccceEEeC-CcccEEEEEECCCCC-EEEEEeCCCEEEEEECCCCCe-e
Confidence 477765 89999999999999998642 34566776 677889999999998 899999999999999998874 6
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecC------CCEEEEEEcCCeEEE
Q 006743 75 SWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDD------DWILTAGTSNGRVVF 148 (633)
Q Consensus 75 ~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPd------G~~LatGs~DGsV~I 148 (633)
..+.+|...|.+++|+|++.+|++|+.|++|++||++.........|...|.+++|.|. +.+|++++.|+.|++
T Consensus 101 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~ 180 (319)
T 3frx_A 101 QRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKA 180 (319)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEE
T ss_pred EEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEE
Confidence 77889999999999999999999999999999999986555555579999999999985 458999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 149 WDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
||+++.. ....+ .+|...|.+++|+|++++ +++++.|+.|++||++....
T Consensus 181 wd~~~~~-~~~~~--~~h~~~v~~~~~sp~g~~------------l~s~~~dg~i~iwd~~~~~~ 230 (319)
T 3frx_A 181 WNLNQFQ-IEADF--IGHNSNINTLTASPDGTL------------IASAGKDGEIMLWNLAAKKA 230 (319)
T ss_dssp EETTTTE-EEEEE--CCCCSCEEEEEECTTSSE------------EEEEETTCEEEEEETTTTEE
T ss_pred EECCcch-hheee--cCCCCcEEEEEEcCCCCE------------EEEEeCCCeEEEEECCCCcE
Confidence 9998763 33333 389999999999996544 55567899999999975443
No 22
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=1.5e-25 Score=225.31 Aligned_cols=197 Identities=17% Similarity=0.293 Sum_probs=160.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc----eeEEEeCCCCCcEEEEEEcc--CCCeEEEEEeCCCeEEEEECCCCC---
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGA----KAAELKDPNEQVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGRS--- 71 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk----~v~~~~~~~~~~VssLafSp--dg~~lLaSGs~DGtI~IWDl~t~~--- 71 (633)
+|+|++++|++|+.||.|++||+.++. ....+.+ |...|.+++|+| ++. +|++|+.||.|+|||+....
T Consensus 18 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~d~~-~l~s~~~dg~v~vwd~~~~~~~~ 95 (351)
T 3f3f_A 18 VYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRA-HDSSIVAIDWASPEYGR-IIASASYDKTVKLWEEDPDQEEC 95 (351)
T ss_dssp EECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEEC-CSSCEEEEEECCGGGCS-EEEEEETTSCEEEEEECTTSCTT
T ss_pred EEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceecc-CCCcEEEEEEcCCCCCC-EEEEEcCCCeEEEEecCCCcccc
Confidence 489999999999999999999998763 4555665 677899999999 466 89999999999999998763
Q ss_pred -----ceeEEeccCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCce-----------------------------
Q 006743 72 -----PKVSWLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRP----------------------------- 115 (633)
Q Consensus 72 -----~~v~~l~~H~~~VtsLafSPd--g~~LaSgS~DGtVrIWDlrtgk~----------------------------- 115 (633)
..+..+..|...|.+++|+|+ +++|++++.|+.|++||+++++.
T Consensus 96 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 96 SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 236677899999999999998 99999999999999999876542
Q ss_pred -------------------------------eeEe-eCCCCeEEEEEecCC----CEEEEEEcCCeEEEEECCCCCCc--
Q 006743 116 -------------------------------SSCI-TYEAPFSSLAFIDDD----WILTAGTSNGRVVFYDIRGKPQP-- 157 (633)
Q Consensus 116 -------------------------------v~~i-~h~~~ItsLafSPdG----~~LatGs~DGsV~IWDlrs~~k~-- 157 (633)
+..+ .|...|.+++|+|++ ++|++|+.||.|++||++.....
T Consensus 176 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 255 (351)
T 3f3f_A 176 CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLA 255 (351)
T ss_dssp CCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----
T ss_pred ccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccc
Confidence 1111 377899999999998 89999999999999999864210
Q ss_pred -----------------------------------------eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEE
Q 006743 158 -----------------------------------------LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLG 196 (633)
Q Consensus 158 -----------------------------------------v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlS 196 (633)
.......+|...|++++|+|++++ |++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~------------l~s 323 (351)
T 3f3f_A 256 SEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTI------------LSS 323 (351)
T ss_dssp -----------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCC------------EEE
T ss_pred cCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCE------------EEE
Confidence 112222379999999999996554 455
Q ss_pred eeCCCeEEccCCCCC
Q 006743 197 GAVGDSILMPDPLPS 211 (633)
Q Consensus 197 gs~Dg~IkIWDlr~~ 211 (633)
++.|+.|++||+...
T Consensus 324 ~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 324 AGDDGKVRLWKATYS 338 (351)
T ss_dssp EETTSCEEEEEECTT
T ss_pred ecCCCcEEEEecCcC
Confidence 577999999998653
No 23
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=3.2e-25 Score=235.54 Aligned_cols=196 Identities=17% Similarity=0.210 Sum_probs=163.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.|++|++||+++++. ... ..+
T Consensus 130 ~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~~~~~~-~~~-~~~ 205 (393)
T 1erj_A 130 CFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDLRTGQC-SLT-LSI 205 (393)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-EEE-EEC
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCC-EEEEecCCCcEEEEECCCCee-EEE-EEc
Confidence 4899999999999999999999999998888876 667789999999998 899999999999999998774 233 346
Q ss_pred CCCeEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeEe--------eCCCCeEEEEEecCCCEEEEEEcCCeEEEEEC
Q 006743 81 SAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI--------TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDI 151 (633)
Q Consensus 81 ~~~VtsLafSP-dg~~LaSgS~DGtVrIWDlrtgk~v~~i--------~h~~~ItsLafSPdG~~LatGs~DGsV~IWDl 151 (633)
...|.+++|+| ++++|++|+.|+.|++||+++++.+..+ .|...|.+++|+|++++|++|+.||.|++||+
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~ 285 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL 285 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 67899999999 9999999999999999999998876654 47889999999999999999999999999999
Q ss_pred CCCCCc---------eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 152 RGKPQP---------LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 152 rs~~k~---------v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
++.... .......+|...|.+++|+|++. ++++++.|+.|++||+....
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~------------~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 286 QNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE------------YILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp ---------------CEEEEEECCSSCEEEEEECGGGC------------EEEEEETTSEEEEEETTTCC
T ss_pred CCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC------------EEEEEeCCCeEEEEECCCCe
Confidence 864211 11223348999999999999544 55566889999999986543
No 24
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=1.2e-24 Score=227.33 Aligned_cols=200 Identities=12% Similarity=0.124 Sum_probs=164.5
Q ss_pred CccCCC-CEEEEEECCCcEEEEECCCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 006743 1 MYNCKD-EHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (633)
Q Consensus 1 AFSpdG-~~LaSgs~DG~I~IWDl~tgk~v~~~~~-~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~ 78 (633)
+|+|++ ++|++|+.||.|+|||+.+++....+.. .|...|.+++|+|++..+|++++.|+.|++||+.+.. ...+.
T Consensus 80 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~ 157 (383)
T 3ei3_B 80 EWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV--IQVFA 157 (383)
T ss_dssp EECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE--EEEEE
T ss_pred EECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc--eEEEe
Confidence 489999 8999999999999999998888777763 4778899999999544589999999999999998644 44444
Q ss_pred c---CCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCC-EEEEEEcCCeEEEEECCC
Q 006743 79 Q---HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDW-ILTAGTSNGRVVFYDIRG 153 (633)
Q Consensus 79 ~---H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~-~LatGs~DGsV~IWDlrs 153 (633)
. |...|.+++|+|++++|++++.|+.|++||++ ++.+..+ .|...|.+++|+|++. +|++|+.|+.|++||+++
T Consensus 158 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 158 KTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp CCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred ccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 4 44889999999999999999999999999995 4555444 6899999999999998 999999999999999997
Q ss_pred CCCceEEEeecCCCCCeeEEEEcc-CCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCCCC
Q 006743 154 KPQPLTVLRACSSSEAVSSLCWQR-AKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (633)
Q Consensus 154 ~~k~v~~l~~~~H~~~VtsLafsP-dg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~~s 215 (633)
.......+...+|...|.+++|+| ++.+| ++++.|+.|++||++......
T Consensus 237 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l------------~~~~~d~~i~iwd~~~~~~~~ 287 (383)
T 3ei3_B 237 IKDKNSYIAEMPHEKPVNAAYFNPTDSTKL------------LTTDQRNEIRVYSSYDWSKPD 287 (383)
T ss_dssp CCSTTCEEEEEECSSCEEEEEECTTTSCEE------------EEEESSSEEEEEETTBTTSCS
T ss_pred CCcccceEEEecCCCceEEEEEcCCCCCEE------------EEEcCCCcEEEEECCCCcccc
Confidence 432222333336999999999999 66554 445779999999997655543
No 25
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.94 E-value=4.3e-25 Score=230.48 Aligned_cols=195 Identities=16% Similarity=0.224 Sum_probs=156.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc--eeEE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP--KVSW 76 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk--~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~--~v~~ 76 (633)
+|+|+|++|++|+.|+.|+|||+..+. .+..+.+ |...|.+++|+|+++ +|++|+.|++|+|||+..... .+..
T Consensus 68 ~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~ 145 (345)
T 3fm0_A 68 AWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEG-HENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSV 145 (345)
T ss_dssp EECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred EECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccC-CCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEE
Confidence 489999999999999999999988764 4556665 677899999999998 899999999999999976542 2556
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee--eEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 006743 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS--SCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (633)
Q Consensus 77 l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v--~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs 153 (633)
+..|...|.+++|+|++++|++++.|+.|++||+++++.. ..+ .|...|.+++|+|+|++|++|+.||+|+|||...
T Consensus 146 ~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 146 LNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp ECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred ecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecccc
Confidence 7899999999999999999999999999999999887543 333 6899999999999999999999999999999743
Q ss_pred CCC--------------ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 154 KPQ--------------PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 154 ~~k--------------~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
... ++..+. ..|...|.+++|+|++..++ +++.|+.|++||+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~------------s~~~d~~i~vw~~~~ 283 (345)
T 3fm0_A 226 PGNEQGVACSGSDPSWKCICTLS-GFHSRTIYDIAWCQLTGALA------------TACGDDAIRVFQEDP 283 (345)
T ss_dssp TTCTTCCCCC---CEEEEEEEEC-SSCSSCEEEEEECTTTCCEE------------EEETTSCEEEEEECT
T ss_pred CCCCccceeeccCCccceeEEec-CCCCCcEEEEEEecCCCEEE------------EEeCCCeEEEEEeCC
Confidence 211 111111 13788899999988655444 445566777776543
No 26
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.94 E-value=4.3e-25 Score=231.95 Aligned_cols=194 Identities=15% Similarity=0.155 Sum_probs=168.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC-----ceeE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS-----PKVS 75 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~-----~~v~ 75 (633)
+|+|++++|++|+.||.|+|||..+++....+.. +...|.+++|+|++. +|++|+.|+.+++|++.... ....
T Consensus 71 ~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-~~~~v~~~~~sp~g~-~lasg~~d~~i~v~~~~~~~~~~~~~~~~ 148 (354)
T 2pbi_B 71 DWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM-PCTWVMACAYAPSGC-AIACGGLDNKCSVYPLTFDKNENMAAKKK 148 (354)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSSCCCEEEECTTSS-EEEEESTTSEEEEEECCCCTTCCSGGGCE
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCCcceEEec-CCCCEEEEEECCCCC-EEEEeeCCCCEEEEEEeccccccccccce
Confidence 4899999999999999999999999988888876 456678899999998 89999999999999986431 2345
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEec--CCCEEEEEEcCCeEEEEECC
Q 006743 76 WLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFID--DDWILTAGTSNGRVVFYDIR 152 (633)
Q Consensus 76 ~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSP--dG~~LatGs~DGsV~IWDlr 152 (633)
.+..|...|.+++|+|++..|++++.|++|++||+++++++..+ .|...|.+++|+| ++++|++|+.||.|++||++
T Consensus 149 ~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~ 228 (354)
T 2pbi_B 149 SVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR 228 (354)
T ss_dssp EEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETT
T ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 67789999999999999999999999999999999999988777 5889999999988 57899999999999999999
Q ss_pred CCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 153 GKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 153 s~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
+. +++..+. +|...|.+++|+|++. ++++++.|+.|++||++..
T Consensus 229 ~~-~~~~~~~--~h~~~v~~v~~~p~~~------------~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 229 SG-QCVQAFE--THESDVNSVRYYPSGD------------AFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp TC-CEEEEEC--CCSSCEEEEEECTTSS------------EEEEEETTSCEEEEETTTT
T ss_pred CC-cEEEEec--CCCCCeEEEEEeCCCC------------EEEEEeCCCeEEEEECCCC
Confidence 87 3445554 7999999999999644 4556678999999999753
No 27
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=2.3e-25 Score=235.66 Aligned_cols=196 Identities=18% Similarity=0.176 Sum_probs=162.9
Q ss_pred ccCC-CCEEEEEECCCcEEEEECCCCceeEEEe----CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 006743 2 YNCK-DEHLASISLSGDLILHNLASGAKAAELK----DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (633)
Q Consensus 2 FSpd-G~~LaSgs~DG~I~IWDl~tgk~v~~~~----~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~ 76 (633)
|.|+ +.+|++|+.|+.|++||+.+++.+..+. ..|...|.+++|++.+.++|++|+.|++|++||++.....+..
T Consensus 165 ~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~ 244 (380)
T 3iz6_a 165 YVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRT 244 (380)
T ss_dssp CCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEE
T ss_pred EecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEE
Confidence 5665 4579999999999999999999887763 2366778889998744459999999999999999855445778
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeC--------CCCeEEEEEecCCCEEEEEEcCCeEEE
Q 006743 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY--------EAPFSSLAFIDDDWILTAGTSNGRVVF 148 (633)
Q Consensus 77 l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h--------~~~ItsLafSPdG~~LatGs~DGsV~I 148 (633)
+.+|...|++++|+|++++|++|+.|++|++||+++++.+..+.. ...|.+++|+|+|++|++|+.||.|++
T Consensus 245 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~v 324 (380)
T 3iz6_a 245 YHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYV 324 (380)
T ss_dssp ECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEE
T ss_pred ECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEE
Confidence 899999999999999999999999999999999999988776632 124899999999999999999999999
Q ss_pred EECCCCCCceEEEee--cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 149 YDIRGKPQPLTVLRA--CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 149 WDlrs~~k~v~~l~~--~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
||+...+. +..+.. .+|.+.|.+++|+|+++ +|++++.|+.|++||+..
T Consensus 325 wd~~~~~~-~~~~~~~~~~h~~~v~~l~~s~dg~------------~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 325 WDTLLAEM-VLNLGTLQNSHEGRISCLGLSSDGS------------ALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp EETTTCCE-EEEECCSCSSCCCCCCEEEECSSSS------------EEEEECTTSCEEEEECCS
T ss_pred EECCCCce-EEEEecccCCCCCceEEEEECCCCC------------EEEEeeCCCCEEEEecCC
Confidence 99987743 333311 37999999999999654 455567899999999853
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.1e-25 Score=230.16 Aligned_cols=194 Identities=14% Similarity=0.235 Sum_probs=154.1
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCC--ceeEEE-eCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC------c
Q 006743 2 YNCKDEHLASISLSGDLILHNLASG--AKAAEL-KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS------P 72 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tg--k~v~~~-~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~------~ 72 (633)
|+++ +|++|+.|+.|++||+..+ +.+..+ ...|...|.+++|+|+++ +|++|+.|++|+|||+.... .
T Consensus 22 ~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~iw~~~~~~~~~~~~~ 98 (330)
T 2hes_X 22 FSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS-LLAAGSFDSTVSIWAKEESADRTFEMD 98 (330)
T ss_dssp EETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS-EEEEEETTSCEEEEEC-------CCCE
T ss_pred cCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC-EEEEEeCCCcEEEEEcccCcCccccce
Confidence 4554 9999999999999999875 344555 333788899999999997 89999999999999995321 2
Q ss_pred eeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCC----ceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEE
Q 006743 73 KVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR----RPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVV 147 (633)
Q Consensus 73 ~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtg----k~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~ 147 (633)
....+.+|...|++++|+|++++|++|+.|++|++||++.. +++..+ .|...|.+++|+|++.+|++|+.|+.|+
T Consensus 99 ~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~ 178 (330)
T 2hes_X 99 LLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVR 178 (330)
T ss_dssp EEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred eEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 35678899999999999999999999999999999999532 334444 5889999999999999999999999999
Q ss_pred EEECCCCC-CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 148 FYDIRGKP-QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 148 IWDlrs~~-k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+||.+... +++..+. +|.+.|.+++|+|++ ++.++++++.|+.|++||++.
T Consensus 179 iW~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~----------~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 179 IWKDYDDDWECVAVLN--GHEGTVWSSDFDKTE----------GVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEEETTEEEEEEEEC--CCSSCEEEEEECCSS----------SSCEEEEEETTSCEEEEEEEE
T ss_pred EEECCCCCeeEEEEcc--CCCCcEEEEEecCCC----------CeeEEEEEeCCCeEEEEEecC
Confidence 99987642 2344444 899999999999952 245677788899999999853
No 29
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=1e-25 Score=238.24 Aligned_cols=191 Identities=11% Similarity=0.084 Sum_probs=154.3
Q ss_pred CccCCCCEEEEEE--CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-eEEe
Q 006743 1 MYNCKDEHLASIS--LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK-VSWL 77 (633)
Q Consensus 1 AFSpdG~~LaSgs--~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~-v~~l 77 (633)
+|+|||++|++|+ .|+.|+|||+.+++.+..+. +...|.+|+|+|+++ +|++++.|+ +++|+..++... ....
T Consensus 140 ~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~-~l~s~s~~~-~~~~~~~~~~~~~~~~~ 215 (365)
T 4h5i_A 140 YISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGK-VVAYITGSS-LEVISTVTGSCIARKTD 215 (365)
T ss_dssp EECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSS-EEEEECSSC-EEEEETTTCCEEEEECC
T ss_pred EEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCc-eEEecccee-EEEEEeccCcceeeeec
Confidence 5899999987655 68999999999999988886 445688999999998 788887554 666666555533 3345
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCC----eEEEEeCCCCceee-----EeeCCCCeEEEEEecCCCEEEEEEcCCeEEE
Q 006743 78 KQHSAPTAGISFSSDDKIIASVGLDK----KLYTYDPGSRRPSS-----CITYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg~~LaSgS~DG----tVrIWDlrtgk~v~-----~i~h~~~ItsLafSPdG~~LatGs~DGsV~I 148 (633)
..|...|.+++|+|+++++++++.|+ .+++||+....... ...|...|++++|+|||++||+|+.|+.|+|
T Consensus 216 ~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~i 295 (365)
T 4h5i_A 216 FDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIAL 295 (365)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEE
Confidence 67888999999999999999999887 68899988765422 2258889999999999999999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 149 WDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
||+++.+ ++..+ ..+|...|++++|+|+|++ |++++.|++|+|||+.
T Consensus 296 wd~~~~~-~~~~~-~~gH~~~V~~v~fSpdg~~------------laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 296 VKLKDLS-MSKIF-KQAHSFAITEVTISPDSTY------------VASVSAANTIHIIKLP 342 (365)
T ss_dssp EETTTTE-EEEEE-TTSSSSCEEEEEECTTSCE------------EEEEETTSEEEEEECC
T ss_pred EECCCCc-EEEEe-cCcccCCEEEEEECCCCCE------------EEEEeCCCeEEEEEcC
Confidence 9999873 33322 1379999999999996554 5556889999999984
No 30
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.94 E-value=9.1e-25 Score=227.19 Aligned_cols=189 Identities=16% Similarity=0.185 Sum_probs=157.7
Q ss_pred cC-CCCEEEEEECCCcEEEEECCCC-------ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 006743 3 NC-KDEHLASISLSGDLILHNLASG-------AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (633)
Q Consensus 3 Sp-dG~~LaSgs~DG~I~IWDl~tg-------k~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v 74 (633)
++ ++++|++|+.|+.|+|||+.+. .....+.+ |...|.+++|+|++. ++++|+.|++|+|||+++++. +
T Consensus 35 ~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~-h~~~V~~~~~~~~~~-~l~s~s~D~~v~lwd~~~~~~-~ 111 (343)
T 2xzm_R 35 ENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTG-HNHFVSDLALSQENC-FAISSSWDKTLRLWDLRTGTT-Y 111 (343)
T ss_dssp TTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECC-CSSCEEEEEECSSTT-EEEEEETTSEEEEEETTSSCE-E
T ss_pred cCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhcc-CCCceEEEEECCCCC-EEEEEcCCCcEEEEECCCCcE-E
Confidence 44 8999999999999999998754 23455655 677899999999998 899999999999999998874 6
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe---eCCCCeEEEEEecCC----------CEEEEEE
Q 006743 75 SWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI---TYEAPFSSLAFIDDD----------WILTAGT 141 (633)
Q Consensus 75 ~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i---~h~~~ItsLafSPdG----------~~LatGs 141 (633)
..+.+|...|++++|+|++++|++++.|++|++||+......... .|...|.+++|+|++ .+|++++
T Consensus 112 ~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~ 191 (343)
T 2xzm_R 112 KRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG 191 (343)
T ss_dssp EEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE
T ss_pred EEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEc
Confidence 678899999999999999999999999999999999854433333 478889999999987 7999999
Q ss_pred cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 142 SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 142 ~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
.||.|++||.+. +....+. +|...|.+++|+|++++ |++++.|+.|++||++.
T Consensus 192 ~d~~i~iwd~~~--~~~~~~~--~h~~~v~~~~~s~~g~~------------l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 192 WDGRLKVWNTNF--QIRYTFK--AHESNVNHLSISPNGKY------------IATGGKDKKLLIWDILN 244 (343)
T ss_dssp TTSEEEEEETTT--EEEEEEE--CCSSCEEEEEECTTSSE------------EEEEETTCEEEEEESSC
T ss_pred CCCEEEEEcCCC--ceeEEEc--CccccceEEEECCCCCE------------EEEEcCCCeEEEEECCC
Confidence 999999999543 2333343 89999999999996554 55557899999999853
No 31
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.94 E-value=1.4e-25 Score=236.07 Aligned_cols=195 Identities=14% Similarity=0.154 Sum_probs=165.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|++++++|++|+.||.|++||+.+++....+.+ |...|.+++|+|+++ +|++|+.|+.|++||+.+.+. +..+.+|
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~-~~~~~~h 180 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQA-HVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKDGSN-PRTLIGH 180 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTS-SSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCC-CEEEECC
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeeccc-ccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCCCcC-ceEEcCC
Confidence 3789999999999999999999998887776654 778899999999988 899999999999999988774 5677899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee----CCCCeEEE---------------------EEecCCC
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT----YEAPFSSL---------------------AFIDDDW 135 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~----h~~~ItsL---------------------afSPdG~ 135 (633)
...|.+++|+|++++|++++.|+.|++||+++++.+..+. +...+.++ +|+|+++
T Consensus 181 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 260 (420)
T 3vl1_A 181 RATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK 260 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC
Confidence 9999999999999999999999999999999998887763 34445544 4578899
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 136 ~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
+|++|+.||.|++||+++......... .|...|.+++|+|+++ .++++++.|+.|++||++..
T Consensus 261 ~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~-----------~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 261 YVIAGHVSGVITVHNVFSKEQTIQLPS--KFTCSCNSLTVDGNNA-----------NYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECC--TTSSCEEEEEECSSCT-----------TEEEEEETTSEEEEEETTCT
T ss_pred EEEEEcCCCeEEEEECCCCceeEEccc--ccCCCceeEEEeCCCC-----------CEEEEEeCCCeEEEEEcCCC
Confidence 999999999999999998754333322 6889999999999644 25566678999999999754
No 32
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.94 E-value=5.9e-26 Score=236.02 Aligned_cols=181 Identities=12% Similarity=0.134 Sum_probs=144.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc---eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc--eeE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP--KVS 75 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk---~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~--~v~ 75 (633)
+|+|++++|++++.||.|++||+.+++ ....+.. |...|.+++|+|+++ +|++|+.|+.|++||++.... ...
T Consensus 62 ~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~ 139 (377)
T 3dwl_C 62 DWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLR-LNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSK 139 (377)
T ss_dssp EECTTTCCEEEEETTSSEEEC------CCCCEEECCC-CSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCE
T ss_pred EEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecc-cCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeee
Confidence 489999999999999999999998876 4555554 677899999999987 899999999999999987652 245
Q ss_pred Eecc-CCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC------------------CceeeEeeCCCCeEEEEEecCCCE
Q 006743 76 WLKQ-HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS------------------RRPSSCITYEAPFSSLAFIDDDWI 136 (633)
Q Consensus 76 ~l~~-H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrt------------------gk~v~~i~h~~~ItsLafSPdG~~ 136 (633)
.+.. |...|++++|+|++++|++++.|+.|++||++. ++++..+.|...|.+++|+|++++
T Consensus 140 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 140 HLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNA 219 (377)
T ss_dssp EECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSC
T ss_pred EeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCE
Confidence 6666 999999999999999999999999999999853 334444478899999999999999
Q ss_pred EEEEEcCCeEEEEECCCCCCc---eEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006743 137 LTAGTSNGRVVFYDIRGKPQP---LTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 137 LatGs~DGsV~IWDlrs~~k~---v~~l~~~~H~~~VtsLafsPdg~~Las~ 185 (633)
|++++.||.|++||+++...+ +..+. +|...|.+++|+|++++|+++
T Consensus 220 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 220 LAYAGHDSSVTIAYPSAPEQPPRALITVK--LSQLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp EEEEETTTEEC-CEECSTTSCEEECCCEE--CSSSCEEEEEEEETTEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCCCcceeeEeec--CCCCceEEEEEcCCCCEEEEE
Confidence 999999999999999987653 23333 799999999999977666554
No 33
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.93 E-value=1.9e-24 Score=219.97 Aligned_cols=194 Identities=17% Similarity=0.256 Sum_probs=165.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|++++|++|+.||.|++||+.+++.+..+.+ |...|.+++|+|++. +|++|+.|+.|++||+++.+. +..+..|
T Consensus 72 ~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~-~~~~~~~ 148 (312)
T 4ery_A 72 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKC-LKTLPAH 148 (312)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCE-EEEECCC
T ss_pred EEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEE-EEEecCC
Confidence 4899999999999999999999999999998886 667788999999987 899999999999999998774 6778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i--~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v 158 (633)
...|.+++|+|++++|++++.|+.|++||+++++.+..+ .+...+.+++|+|++++|++++.||.|++||+++. +.+
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~ 227 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCL 227 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT-EEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC-cEE
Confidence 999999999999999999999999999999998887665 36678999999999999999999999999999987 334
Q ss_pred EEEeecCCCCCeeE--EEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 159 TVLRACSSSEAVSS--LCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 159 ~~l~~~~H~~~Vts--LafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
..+. +|...+.+ ..|.+ .++.++++++.|+.|++||+...
T Consensus 228 ~~~~--~~~~~~~~~~~~~~~-----------~~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 228 KTYT--GHKNEKYCIFANFSV-----------TGGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp EEEC--SSCCSSSCCCEEEEC-----------SSSCEEEECCTTSCEEEEETTTC
T ss_pred EEEE--ecCCceEEEEEEEEe-----------CCCcEEEEECCCCEEEEEECCCc
Confidence 4444 45444332 23332 25667788889999999998654
No 34
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=9.2e-26 Score=234.58 Aligned_cols=199 Identities=12% Similarity=0.163 Sum_probs=157.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCC--ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC--ceeEE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASG--AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS--PKVSW 76 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tg--k~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~--~~v~~ 76 (633)
+|+|+|++|++|+.||.|+|||+.++ +.+..+.+ |...|.+++|+|+++ +|++++.|+.|+|||+.+.. .....
T Consensus 18 ~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~-~l~s~s~d~~v~vwd~~~~~~~~~~~~ 95 (377)
T 3dwl_C 18 AFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSD-HDKIVTCVDWAPKSN-RIVTCSQDRNAYVYEKRPDGTWKQTLV 95 (377)
T ss_dssp EECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCC-CSSCEEEEEECTTTC-CEEEEETTSSEEEC------CCCCEEE
T ss_pred EECCCCCEEEEecCCCEEEEEEccCCceEEEEEEec-CCceEEEEEEeCCCC-EEEEEeCCCeEEEEEcCCCCceeeeeE
Confidence 48999999999999999999999888 66666765 677899999999987 89999999999999998765 22566
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce---eeEe-e-CCCCeEEEEEecCCCEEEEEEcCCeEEEEEC
Q 006743 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP---SSCI-T-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDI 151 (633)
Q Consensus 77 l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~---v~~i-~-h~~~ItsLafSPdG~~LatGs~DGsV~IWDl 151 (633)
+..|...|.+++|+|++++|++++.|+.|++||+++++. ...+ . |...|.+++|+|++++|++++.||.|++||+
T Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 96 LLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp CCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred ecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence 788999999999999999999999999999999998763 4444 4 8999999999999999999999999999998
Q ss_pred CCCC--------------CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 152 RGKP--------------QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 152 rs~~--------------k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
+... .....+..++|...|.+++|+|++++| ++++.|+.|++||++....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l------------~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNAL------------AYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCE------------EEEETTTEEC-CEECSTTS
T ss_pred EecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEE------------EEEeCCCcEEEEECCCCCC
Confidence 6321 012233333899999999999966554 4457799999999875443
No 35
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=1.3e-24 Score=244.74 Aligned_cols=197 Identities=11% Similarity=0.164 Sum_probs=161.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCce--eEEEeC-------------------------------------------C
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAK--AAELKD-------------------------------------------P 35 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~--v~~~~~-------------------------------------------~ 35 (633)
+|+|+|++||+|+.||.|+|||+.+++. ...+.+ .
T Consensus 66 ~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~g 145 (611)
T 1nr0_A 66 KTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTG 145 (611)
T ss_dssp EECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCC
T ss_pred EECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecC
Confidence 5899999999999999999999864332 112211 2
Q ss_pred CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q 006743 36 NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP 115 (633)
Q Consensus 36 ~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~ 115 (633)
|...|.+++|+|++..+|++|+.|++|++||....+. ...+.+|...|++++|+|++++|++++.|++|++||+++++.
T Consensus 146 h~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~-~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 146 QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF-KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK 224 (611)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEE-EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeE-eeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcE
Confidence 4456777888888765799999999999999887653 567899999999999999999999999999999999999988
Q ss_pred eeEe--------eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEE--------------------------
Q 006743 116 SSCI--------TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVL-------------------------- 161 (633)
Q Consensus 116 v~~i--------~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l-------------------------- 161 (633)
+..+ .|.+.|.+++|+|++++|++++.|++|++||+++.+. +..+
T Consensus 225 ~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 303 (611)
T 1nr0_A 225 TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV-EKTIPVGTRIEDQQLGIIWTKQALVSISAN 303 (611)
T ss_dssp EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-EEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred eeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCce-eeeecCCCCccceeEEEEEcCCEEEEEeCC
Confidence 7766 5889999999999999999999999999999987532 1111
Q ss_pred ---------------eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 162 ---------------RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 162 ---------------~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
...+|...|++++|+|++++ +++++.|+.|++||+...
T Consensus 304 ~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~------------l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 304 GFINFVNPELGSIDQVRYGHNKAITALSSSADGKT------------LFSADAEGHINSWDISTG 356 (611)
T ss_dssp CCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE------------EEEEETTSCEEEEETTTC
T ss_pred CcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCE------------EEEEeCCCcEEEEECCCC
Confidence 12378899999999996554 555578999999998753
No 36
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=1.2e-24 Score=222.11 Aligned_cols=194 Identities=12% Similarity=0.173 Sum_probs=157.4
Q ss_pred ccC--CCCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-cee
Q 006743 2 YNC--KDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKV 74 (633)
Q Consensus 2 FSp--dG~~LaSgs~DG~I~IWDl~tgk--~v~~~~~~~~~~VssLafSpd--g~~lLaSGs~DGtI~IWDl~t~~-~~v 74 (633)
|++ +|++|++|+.||+|+|||+.+++ .+..+.. |...|.+++|+|+ +. +|++|+.|+.|++||++... ...
T Consensus 61 ~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~ 138 (297)
T 2pm7_B 61 WAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTSP 138 (297)
T ss_dssp ECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECC-CSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBCC
T ss_pred ecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeec-CCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCceee
Confidence 655 48999999999999999998774 4455554 6778999999997 55 89999999999999998653 224
Q ss_pred EEeccCCCCeEEEEEcCC-------------CCEEEEEeCCCeEEEEeCCCCc----eeeEe-eCCCCeEEEEEecCC--
Q 006743 75 SWLKQHSAPTAGISFSSD-------------DKIIASVGLDKKLYTYDPGSRR----PSSCI-TYEAPFSSLAFIDDD-- 134 (633)
Q Consensus 75 ~~l~~H~~~VtsLafSPd-------------g~~LaSgS~DGtVrIWDlrtgk----~v~~i-~h~~~ItsLafSPdG-- 134 (633)
..+.+|...|.+++|+|+ +++|++|+.|++|++||+++++ ....+ .|...|.+++|+|++
T Consensus 139 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~ 218 (297)
T 2pm7_B 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 218 (297)
T ss_dssp EEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred eeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCC
Confidence 567899999999999996 5799999999999999998765 33334 589999999999984
Q ss_pred -CEEEEEEcCCeEEEEECCCCCCce--EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 135 -WILTAGTSNGRVVFYDIRGKPQPL--TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 135 -~~LatGs~DGsV~IWDlrs~~k~v--~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
.+|++++.|++|+|||++...... ..+....|...|.+++|+|++++|+ +++.|+.|++|++.
T Consensus 219 ~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~la------------s~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 219 RSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLA------------LSGGDNKVTLWKEN 284 (297)
T ss_dssp SEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEE------------EEETTSCEEEEEEC
T ss_pred ceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEE------------EEcCCCcEEEEEEC
Confidence 899999999999999998753222 2232246889999999999665554 45679999999875
No 37
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=1.3e-24 Score=247.49 Aligned_cols=177 Identities=20% Similarity=0.333 Sum_probs=152.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE---e
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW---L 77 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~---l 77 (633)
+|+++|++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.|++|+|||+..... ... .
T Consensus 437 ~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~-h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~-~~~~~~~ 513 (694)
T 3dm0_A 437 VLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVG-HTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECK-YTISEGG 513 (694)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEE-EEECSST
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCcceeEEeC-CCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcc-eeeccCC
Confidence 4899999999999999999999999999988886 667788999999998 799999999999999876542 222 1
Q ss_pred ccCCCCeEEEEEcCCC--CEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 006743 78 KQHSAPTAGISFSSDD--KIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg--~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~ 154 (633)
.+|...|.+++|+|++ ..|++++.|++|++||++++++...+ .|.+.|.+++|+|++++|++|+.||.|+|||+++.
T Consensus 514 ~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 514 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG 593 (694)
T ss_dssp TSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT
T ss_pred CCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 4688899999999976 68999999999999999998887776 68999999999999999999999999999999987
Q ss_pred CCceEEEeecCCCCCeeEEEEccCCCeEEE
Q 006743 155 PQPLTVLRACSSSEAVSSLCWQRAKPVFID 184 (633)
Q Consensus 155 ~k~v~~l~~~~H~~~VtsLafsPdg~~Las 184 (633)
. .+....+...|.+++|+|++.++++
T Consensus 594 ~----~~~~~~~~~~v~~~~~sp~~~~l~~ 619 (694)
T 3dm0_A 594 K----KLYSLEANSVIHALCFSPNRYWLCA 619 (694)
T ss_dssp E----EEECCBCSSCEEEEEECSSSSEEEE
T ss_pred c----eEEEecCCCcEEEEEEcCCCcEEEE
Confidence 3 2233346678999999998766654
No 38
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.2e-24 Score=223.70 Aligned_cols=200 Identities=12% Similarity=0.174 Sum_probs=166.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECC--CCceeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCCc-eeE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLA--SGAKAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRSP-KVS 75 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~--tgk~v~~~~~~~~~~VssLafSpd--g~~lLaSGs~DGtI~IWDl~t~~~-~v~ 75 (633)
+|+|++++|++|+.||.|+|||+. +++.+..+.+ |...|.+++|+++ ++ +|++|+.||.|+|||+.+... .+.
T Consensus 18 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~ 95 (379)
T 3jrp_A 18 VLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWKEENGRWSQIA 95 (379)
T ss_dssp EECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCS-EEEEEETTSCEEEEEEETTEEEEEE
T ss_pred EEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecC-CCCcEEEEEeCCCCCCC-EEEEeccCCEEEEEEcCCCceeEee
Confidence 589999999999999999999997 4556666765 6778999999876 66 899999999999999987752 356
Q ss_pred EeccCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCcee---eEeeCCCCeEEEEEec-------------CCCEE
Q 006743 76 WLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRPS---SCITYEAPFSSLAFID-------------DDWIL 137 (633)
Q Consensus 76 ~l~~H~~~VtsLafSPd--g~~LaSgS~DGtVrIWDlrtgk~v---~~i~h~~~ItsLafSP-------------dG~~L 137 (633)
.+..|...|.+++|+|+ +.+|++++.|+.|++||++++... ....|...|.+++|+| ++.+|
T Consensus 96 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l 175 (379)
T 3jrp_A 96 VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 175 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEE
T ss_pred eecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEE
Confidence 67789999999999998 999999999999999999987432 2336889999999999 69999
Q ss_pred EEEEcCCeEEEEECCCCCCceEE-EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 138 TAGTSNGRVVFYDIRGKPQPLTV-LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 138 atGs~DGsV~IWDlrs~~k~v~~-l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
++++.||.|++||++........ ....+|...|.+++|+|++ ..+.++++++.|+.|++||++..
T Consensus 176 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~---------~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 176 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV---------LLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC---------SSSEEEEEEETTSCEEEEEESST
T ss_pred EEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCC---------CCCCeEEEEeCCCEEEEEeCCCC
Confidence 99999999999999876543222 2334799999999999951 01566777788999999998653
No 39
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.93 E-value=5e-24 Score=215.40 Aligned_cols=193 Identities=17% Similarity=0.184 Sum_probs=168.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk--~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~ 78 (633)
+|+|++++|++++.||.|++||+.+++ ....+.. +...+.+++|+|+++ +|++++.||.|++||+.+.+. +..+.
T Consensus 104 ~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~~~~-~~~~~ 180 (337)
T 1gxr_A 104 KLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTS-SAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTL-VRQFQ 180 (337)
T ss_dssp EECTTSSEEEEEESSSEEEEEECCCC--EEEEEEEC-SSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE-EEEEC
T ss_pred EEcCCCCEEEEEcCCCcEEEEECCCCCcceeeeccc-CCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCce-eeeee
Confidence 488999999999999999999998877 4455554 667789999999987 899999999999999988764 66778
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 006743 79 QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (633)
Q Consensus 79 ~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v 158 (633)
.|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+...+.+++|+|++++|++++.||.|++||+++...
T Consensus 181 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-- 258 (337)
T 1gxr_A 181 GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-- 258 (337)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE--
T ss_pred cccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe--
Confidence 899999999999999999999999999999999999988888999999999999999999999999999999998732
Q ss_pred EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 159 TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 159 ~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
.....|...|.+++|+|++++ +++++.|+.|++||+....
T Consensus 259 --~~~~~~~~~v~~~~~~~~~~~------------l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 259 --YQLHLHESCVLSLKFAYCGKW------------FVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp --EEECCCSSCEEEEEECTTSSE------------EEEEETTSEEEEEETTTCC
T ss_pred --EEEcCCccceeEEEECCCCCE------------EEEecCCCcEEEEECCCCe
Confidence 234479999999999996554 4555779999999986543
No 40
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.4e-24 Score=225.33 Aligned_cols=194 Identities=14% Similarity=0.203 Sum_probs=154.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCC-------CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-C-
Q 006743 1 MYNCKDEHLASISLSGDLILHNLAS-------GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR-S- 71 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~t-------gk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~-~- 71 (633)
+|+|++++|++|+.|+.|+|||+.. .+.+..+.+ |...|.+++|+|+++ +|++|+.|++|+|||+... .
T Consensus 65 ~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~ 142 (330)
T 2hes_X 65 AWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-HENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEE 142 (330)
T ss_dssp EECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCC
T ss_pred EECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-CCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCC
Confidence 4899999999999999999999853 234556665 677899999999998 8999999999999999532 1
Q ss_pred -ceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--ceeeEe-eCCCCeEEEEEecC--CCEEEEEEcCCe
Q 006743 72 -PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR--RPSSCI-TYEAPFSSLAFIDD--DWILTAGTSNGR 145 (633)
Q Consensus 72 -~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtg--k~v~~i-~h~~~ItsLafSPd--G~~LatGs~DGs 145 (633)
..+..+.+|...|.+++|+|++.+|++++.|++|++||++++ +++..+ .|...|.+++|+|+ +.+|++|+.|++
T Consensus 143 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 143 YECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp CEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred eEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe
Confidence 235678899999999999999999999999999999999876 455555 68999999999998 779999999999
Q ss_pred EEEEECCCCCC----ceEEE-eec-CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 146 VVFYDIRGKPQ----PLTVL-RAC-SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 146 V~IWDlrs~~k----~v~~l-~~~-~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
|++||++.... ..... ... .|...|.+++|++++ ++++++.|+.|++||+.
T Consensus 223 v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-------------~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 223 VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-------------LIASVGADGVLAVYEEV 279 (330)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-------------CEEEEETTSCEEEEEEE
T ss_pred EEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-------------EEEEEeCCCEEEEEEcC
Confidence 99999875421 01111 111 389999999998632 45666789999999964
No 41
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.93 E-value=2.4e-25 Score=229.56 Aligned_cols=200 Identities=10% Similarity=0.131 Sum_probs=162.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ceeE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKVS 75 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk--~v~~~~~~~~~~VssLafSpd--g~~lLaSGs~DGtI~IWDl~t~~-~~v~ 75 (633)
+|+++|++||+|+.|+.|+|||+.+++ .+..+.+ |...|.+++|++. +. +|++|+.|++|+|||++++. ....
T Consensus 20 ~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~g-H~~~V~~v~~~~~~~~~-~l~s~s~D~~v~iWd~~~~~~~~~~ 97 (316)
T 3bg1_A 20 QMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRG-HEGPVWQVAWAHPMYGN-ILASCSYDRKVIIWREENGTWEKSH 97 (316)
T ss_dssp EECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEEC-CSSCEEEEEECCGGGSS-CEEEEETTSCEEEECCSSSCCCEEE
T ss_pred eEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcC-CCccEEEEEeCCCCCCC-EEEEEECCCEEEEEECCCCcceEEE
Confidence 489999999999999999999998775 3566776 6778999999753 55 89999999999999998764 2356
Q ss_pred EeccCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCcee---eEe-eCCCCeEEEEEecC----------------
Q 006743 76 WLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRPS---SCI-TYEAPFSSLAFIDD---------------- 133 (633)
Q Consensus 76 ~l~~H~~~VtsLafSPd--g~~LaSgS~DGtVrIWDlrtgk~v---~~i-~h~~~ItsLafSPd---------------- 133 (633)
.+.+|...|++++|+|+ +.+|++|+.|+.|++||++.+... ..+ .|...|.+++|+|+
T Consensus 98 ~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 177 (316)
T 3bg1_A 98 EHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPN 177 (316)
T ss_dssp EECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCC
T ss_pred EccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCcc
Confidence 67889999999999996 889999999999999999876422 222 58889999999997
Q ss_pred -CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 134 -DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 134 -G~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+++|++|+.|+.|++||++............+|...|.+++|+|++. .+..+|++++.|+.|++||+..
T Consensus 178 ~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~--------~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 178 YIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG--------LPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSS--------CSCCEEEEEETTCEEEEEECSS
T ss_pred ccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCC--------CCCceEEEEcCCCeEEEEEccC
Confidence 47899999999999999975432122223348999999999999631 1346778889999999999854
No 42
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=1.9e-24 Score=237.34 Aligned_cols=185 Identities=20% Similarity=0.327 Sum_probs=160.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++++.|+.|++||. +++.+..+.+ |...|.+++|+|+++ +|++++.|+.|++||..... +..+.+|
T Consensus 392 ~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~-~~~~v~~~~~s~d~~-~l~~~~~d~~v~~w~~~~~~--~~~~~~~ 466 (577)
T 2ymu_A 392 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVWGVAFSPDDQ-TIASASDDKTVKLWNRNGQL--LQTLTGH 466 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECT-TCCEEEEEEC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTSCE--EEEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecC-CCCCeEEEEECCCCC-EEEEEcCCCEEEEEECCCCE--EEEEcCC
Confidence 48999999999999999999995 6778888876 667789999999998 89999999999999976543 6778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~ 159 (633)
...|++++|+|++++|++++.|+.|++||. +++++..+ .|...|++++|+|++++|++++.||.|+|||... +++.
T Consensus 467 ~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~--~~~~ 543 (577)
T 2ymu_A 467 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQ 543 (577)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS--CEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC--CEEE
Confidence 999999999999999999999999999996 55666555 6899999999999999999999999999999643 3455
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccC
Q 006743 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (633)
Q Consensus 160 ~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWD 207 (633)
.+. +|.+.|++++|+|++++| ++++.|+.|++||
T Consensus 544 ~~~--~h~~~v~~~~fs~dg~~l------------~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 544 TLT--GHSSSVWGVAFSPDGQTI------------ASASSDKTVKLWN 577 (577)
T ss_dssp EEE--CCSSCEEEEEECTTSSCE------------EEEETTSCEEEEC
T ss_pred EEc--CCCCCEEEEEEcCCCCEE------------EEEeCCCEEEEeC
Confidence 555 899999999999965554 5557799999997
No 43
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.93 E-value=7.7e-25 Score=230.57 Aligned_cols=193 Identities=16% Similarity=0.248 Sum_probs=155.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEE---EeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAE---LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~---~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l 77 (633)
+|+|+++ +++++.||.|+|||+.+++.... ....|...|.+|+|+|+++ +|++|+.|+.|+|||+.+++. +..+
T Consensus 101 ~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~sgs~dg~v~iwd~~~~~~-~~~~ 177 (357)
T 4g56_B 101 AWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGT-QAVSGGKDFSVKVWDLSQKAV-LKSY 177 (357)
T ss_dssp EEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTTEE-EEEE
T ss_pred EEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcE-EEEE
Confidence 4888875 55688899999999988764422 1224778899999999998 899999999999999998874 6778
Q ss_pred ccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeEe---eCCCCeEEEEEecC-CCEEEEEEcCCeEEEEECC
Q 006743 78 KQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCI---TYEAPFSSLAFIDD-DWILTAGTSNGRVVFYDIR 152 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg-~~LaSgS~DGtVrIWDlrtgk~v~~i---~h~~~ItsLafSPd-G~~LatGs~DGsV~IWDlr 152 (633)
..|...|++++|++++ .++++++.|+.|++||++++++...+ .+...+.+++|+|+ +.+|++|+.|+.|++||++
T Consensus 178 ~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~ 257 (357)
T 4g56_B 178 NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK 257 (357)
T ss_dssp CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS
T ss_pred cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECC
Confidence 8999999999999976 58899999999999999998877655 36778999999997 5788999999999999999
Q ss_pred CCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 153 GKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 153 s~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+. +++..+. +|...|++++|+|++ ..+|++++.|+.|+|||+..
T Consensus 258 ~~-~~~~~~~--~~~~~v~~l~~sp~~-----------~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 258 NP-DSAQTSA--VHSQNITGLAYSYHS-----------SPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp CG-GGCEEEC--CCSSCEEEEEECSSS-----------SCCEEEEETTSCEEEECTTS
T ss_pred CC-cEeEEEe--ccceeEEEEEEcCCC-----------CCEEEEEeCCCEEEEEECCC
Confidence 87 4455555 799999999999963 34556678899999999854
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.93 E-value=7.3e-24 Score=214.19 Aligned_cols=189 Identities=11% Similarity=0.081 Sum_probs=165.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|++++++|++++.||.|++||+.+++.+..+.. |...+.+++|+|++. +|++++.||.|++||+++.+. +. ...|
T Consensus 148 ~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~-~~-~~~~ 223 (337)
T 1gxr_A 148 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQ-LQ-QHDF 223 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-EE-EEEC
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec-ccCceEEEEECCCCC-EEEEEecCCcEEEEECCCCce-Ee-eecC
Confidence 4789999999999999999999999998888876 667789999999987 899999999999999998774 23 3457
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~ 160 (633)
...|.+++|+|++++|++++.|+.|++||+++++......|...|.+++|+|++++|++++.||.|++||+++... +..
T Consensus 224 ~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~-~~~ 302 (337)
T 1gxr_A 224 TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS-IFQ 302 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-EEE
T ss_pred CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE-EEE
Confidence 8899999999999999999999999999999988777778999999999999999999999999999999998743 222
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 161 l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
..|...|.+++|+|+++ ++++++.|+.|++||+.
T Consensus 303 ---~~~~~~v~~~~~s~~~~------------~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 303 ---SKESSSVLSCDISVDDK------------YIVTGSGDKKATVYEVI 336 (337)
T ss_dssp ---EECSSCEEEEEECTTSC------------EEEEEETTSCEEEEEEE
T ss_pred ---ecCCCcEEEEEECCCCC------------EEEEecCCCeEEEEEEe
Confidence 35889999999999654 44555779999999874
No 45
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=4.8e-24 Score=240.20 Aligned_cols=197 Identities=13% Similarity=0.155 Sum_probs=161.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-eEE---
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK-VSW--- 76 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~-v~~--- 76 (633)
+|+|||++|++++ ++.|++||+.+++....+.+ |...|.+++|+|+++ +|++|+.||+|+|||+.+.... ...
T Consensus 25 ~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~-h~~~v~~~~~spdg~-~lasg~~d~~v~lWd~~~~~~~~~~~~~~ 101 (611)
T 1nr0_A 25 GNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTE-HSHQTTVAKTSPSGY-YCASGDVHGNVRIWDTTQTTHILKTTIPV 101 (611)
T ss_dssp EECTTSSEEEEEE-TTEEEEEETTCSSCCEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEESSSTTCCEEEEEEC
T ss_pred eeCCCCCEEEeCC-CCEEEEecCCCcccCeEecC-CCCceEEEEECCCCc-EEEEEeCCCCEEEeECCCCcceeeEeecc
Confidence 4899999999987 56999999998888888886 667799999999998 8999999999999998543211 111
Q ss_pred -----------------------------------------eccCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCc
Q 006743 77 -----------------------------------------LKQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGSRR 114 (633)
Q Consensus 77 -----------------------------------------l~~H~~~VtsLafSPdg~-~LaSgS~DGtVrIWDlrtgk 114 (633)
+.+|...|++++|+|++. +|++|+.|++|++||.++++
T Consensus 102 ~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~ 181 (611)
T 1nr0_A 102 FSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK 181 (611)
T ss_dssp SSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE
T ss_pred cCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe
Confidence 345677778888888765 69999999999999999888
Q ss_pred eeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEee-----cCCCCCeeEEEEccCCCeEEEeccC
Q 006743 115 PSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRA-----CSSSEAVSSLCWQRAKPVFIDETTC 188 (633)
Q Consensus 115 ~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~-----~~H~~~VtsLafsPdg~~Las~s~~ 188 (633)
+...+ .|...|.+++|+|+|++|++|+.|+.|++||++++. ....+.. .+|.+.|.+++|+|+++
T Consensus 182 ~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~-~~~~~~~~~~~~~~h~~~V~~v~~spdg~-------- 252 (611)
T 1nr0_A 182 FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT-KTGVFEDDSLKNVAHSGSVFGLTWSPDGT-------- 252 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EEEECBCTTSSSCSSSSCEEEEEECTTSS--------
T ss_pred EeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc-EeeeeccccccccccCCCEEEEEECCCCC--------
Confidence 77766 599999999999999999999999999999998773 3333321 16999999999999654
Q ss_pred CCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 189 KAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 189 sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
+|++++.|+.|++||+.....
T Consensus 253 ----~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 253 ----KIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp ----EEEEEETTSEEEEEETTTTEE
T ss_pred ----EEEEEeCCCeEEEEeCCCCce
Confidence 455567899999999975443
No 46
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.93 E-value=3.8e-24 Score=226.27 Aligned_cols=198 Identities=19% Similarity=0.295 Sum_probs=169.0
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCC-------ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc
Q 006743 1 MYNC-KDEHLASISLSGDLILHNLASG-------AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (633)
Q Consensus 1 AFSp-dG~~LaSgs~DG~I~IWDl~tg-------k~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~ 72 (633)
+|+| ++++|++|+.||.|+|||+.++ +.+..+.+ |...|.+++|+|++.++|++|+.||.|+|||+.+.+.
T Consensus 88 ~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 166 (402)
T 2aq5_A 88 AWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG-HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA 166 (402)
T ss_dssp EECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC-CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE
T ss_pred EeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC-CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc
Confidence 4888 8999999999999999999887 56677776 6678899999999866999999999999999998874
Q ss_pred eeEEe--ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCC-eEEEEEecCCCEEEEE---EcCC
Q 006743 73 KVSWL--KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAP-FSSLAFIDDDWILTAG---TSNG 144 (633)
Q Consensus 73 ~v~~l--~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i--~h~~~-ItsLafSPdG~~LatG---s~DG 144 (633)
+..+ ..|...|.+++|+|++++|++++.|+.|++||+++++.+..+ .|.+. +.+++|+|++.+|++| +.|+
T Consensus 167 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~ 245 (402)
T 2aq5_A 167 -VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER 245 (402)
T ss_dssp -EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCE
T ss_pred -cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCc
Confidence 5566 789999999999999999999999999999999999988776 46555 8999999999999999 7899
Q ss_pred eEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 145 RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 145 sV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
.|++||+++...++.... ..|...|.+++|+|++++++ ++++.|+.|++||+....
T Consensus 246 ~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~-----------~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 246 QVALWDTKHLEEPLSLQE-LDTSSGVLLPFFDPDTNIVY-----------LCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEEEEETTBCSSCSEEEE-CCCCSSCEEEEEETTTTEEE-----------EEETTCSCEEEEEECSST
T ss_pred eEEEEcCccccCCceEEe-ccCCCceeEEEEcCCCCEEE-----------EEEcCCCeEEEEEecCCC
Confidence 999999998765554443 35778899999999755543 345569999999997544
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.3e-23 Score=214.67 Aligned_cols=195 Identities=15% Similarity=0.229 Sum_probs=165.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++|+.||.|++||+.+++.+..+.+ |...|.+++|+|+++ +|++++.||.|++||+.+.+. +..+. |
T Consensus 39 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~-~ 114 (369)
T 3zwl_B 39 KYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDG-HTGTIWSIDVDCFTK-YCVTGSADYSIKLWDVSNGQC-VATWK-S 114 (369)
T ss_dssp EECTTSCEEEEEESSSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSS-EEEEEETTTEEEEEETTTCCE-EEEEE-C
T ss_pred EEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhh-cCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcE-EEEee-c
Confidence 4899999999999999999999999999998886 667789999999987 899999999999999998874 34444 8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCcee-----------e-EeeCCC--CeEEEEEecCCCEEEEEE
Q 006743 81 SAPTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPS-----------S-CITYEA--PFSSLAFIDDDWILTAGT 141 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~D-----GtVrIWDlrtgk~v-----------~-~i~h~~--~ItsLafSPdG~~LatGs 141 (633)
...|.+++|+|++++|++++.+ +.|++||++.+... . ...+.. .+.+++|+|++++|++++
T Consensus 115 ~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 115 PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH 194 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE
T ss_pred CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc
Confidence 8999999999999999999999 99999999765321 1 123444 899999999999999999
Q ss_pred cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 142 SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 142 ~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
.||.|++||+++....+..+. .|...|.+++|+|++++ +++++.|+.|++||++....
T Consensus 195 ~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~------------l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 195 KDGKISKYDVSNNYEYVDSID--LHEKSISDMQFSPDLTY------------FITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp TTSEEEEEETTTTTEEEEEEE--CCSSCEEEEEECTTSSE------------EEEEETTSEEEEEETTTCCE
T ss_pred CCCEEEEEECCCCcEeEEEEe--cCCCceeEEEECCCCCE------------EEEecCCceEEEEECCCCce
Confidence 999999999998545555555 78999999999996544 45557799999999976544
No 48
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7.2e-24 Score=221.94 Aligned_cols=196 Identities=21% Similarity=0.316 Sum_probs=160.6
Q ss_pred CccCCCC-EEEEE----------ECCCcEEEEECCCCc---eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEE
Q 006743 1 MYNCKDE-HLASI----------SLSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWD 66 (633)
Q Consensus 1 AFSpdG~-~LaSg----------s~DG~I~IWDl~tgk---~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWD 66 (633)
+|+|+|+ +|++| +.||.|+|||+.+++ .+..+ .+...|.+++|+|++. +|++|+.||.|+|||
T Consensus 19 ~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~-~l~~~~~dg~v~vw~ 95 (416)
T 2pm9_A 19 AWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL--QVDSKFNDLDWSHNNK-IIAGALDNGSLELYS 95 (416)
T ss_dssp CBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC--CCSSCEEEEEECSSSS-CEEEEESSSCEEEEC
T ss_pred eeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE--ecCCceEEEEECCCCC-eEEEEccCCeEEEee
Confidence 6999997 99999 889999999998875 33333 3677899999999998 899999999999999
Q ss_pred CCC---CCceeEEeccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCc------eeeE----eeCCCCeEEEEEec
Q 006743 67 TTG---RSPKVSWLKQHSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRR------PSSC----ITYEAPFSSLAFID 132 (633)
Q Consensus 67 l~t---~~~~v~~l~~H~~~VtsLafSPd-g~~LaSgS~DGtVrIWDlrtgk------~v~~----i~h~~~ItsLafSP 132 (633)
+.. ....+..+..|...|++++|+|+ +++|++++.|+.|++||+++++ .... ..|...|.+++|+|
T Consensus 96 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 175 (416)
T 2pm9_A 96 TNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQ 175 (416)
T ss_dssp CSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECS
T ss_pred cccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCC
Confidence 987 22346778899999999999997 8999999999999999999876 3322 25888999999999
Q ss_pred C-CCEEEEEEcCCeEEEEECCCCCCceEEEeec----CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCC---eEE
Q 006743 133 D-DWILTAGTSNGRVVFYDIRGKPQPLTVLRAC----SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD---SIL 204 (633)
Q Consensus 133 d-G~~LatGs~DGsV~IWDlrs~~k~v~~l~~~----~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg---~Ik 204 (633)
+ +.+|++++.||.|++||+++. +.+..+... +|...|.+++|+|++ ..++++++.|+ .|+
T Consensus 176 ~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 176 SLAHVFASAGSSNFASIWDLKAK-KEVIHLSYTSPNSGIKQQLSVVEWHPKN-----------STRVATATGSDNDPSIL 243 (416)
T ss_dssp SCTTEEEEESSSSCEEEEETTTT-EEEEEECCCCCSSCCCCCEEEEEECSSC-----------TTEEEEEECCSSSCCCC
T ss_pred CCCcEEEEEcCCCCEEEEECCCC-CcceEEeccccccccCCceEEEEECCCC-----------CCEEEEEECCCCCceEE
Confidence 9 789999999999999999987 334444421 127889999999964 33455566677 999
Q ss_pred ccCCCCC
Q 006743 205 MPDPLPS 211 (633)
Q Consensus 205 IWDlr~~ 211 (633)
+||++..
T Consensus 244 ~~d~~~~ 250 (416)
T 2pm9_A 244 IWDLRNA 250 (416)
T ss_dssp EEETTST
T ss_pred EEeCCCC
Confidence 9999753
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.92 E-value=6.9e-24 Score=218.25 Aligned_cols=197 Identities=14% Similarity=0.185 Sum_probs=164.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-eEEe
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK-VSWL 77 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk--~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~-v~~l 77 (633)
+|+|+|++|++|+.||.|++||+.+++ .+..+.+ |...|.+++|+|+++ +|++++.||.|++||+.+.+.. ...+
T Consensus 15 ~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~ 92 (372)
T 1k8k_C 15 AWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSN-RIVTCGTDRNAYVWTLKGRTWKPTLVI 92 (372)
T ss_dssp EECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTT-EEEEEETTSCEEEEEEETTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCC-EEEEEcCCCeEEEEECCCCeeeeeEEe
Confidence 489999999999999999999998887 7777875 677899999999988 8999999999999999776532 3345
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce---eeEe--eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECC
Q 006743 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP---SSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIR 152 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~---v~~i--~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlr 152 (633)
..|...|.+++|+|++++|++++.|+.|++||++.+.. ...+ .|...|.+++|+|++++|++++.||.|++||++
T Consensus 93 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 93 LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred ecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 77999999999999999999999999999999998763 2222 478899999999999999999999999999975
Q ss_pred C-----------------CCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 153 G-----------------KPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 153 s-----------------~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
. ..+++..+. .|...|.+++|+|+++ ++++++.|+.|++||++....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~------------~l~~~~~d~~i~i~d~~~~~~ 236 (372)
T 1k8k_C 173 IKEVEERPAPTPWGSKMPFGELMFESS--SSCGWVHGVCFSANGS------------RVAWVSHDSTVCLADADKKMA 236 (372)
T ss_dssp CTTTSCCCCCBTTBSCCCTTCEEEECC--CCSSCEEEEEECSSSS------------EEEEEETTTEEEEEEGGGTTE
T ss_pred cccccccccccccccccchhhheEecC--CCCCeEEEEEECCCCC------------EEEEEeCCCEEEEEECCCCce
Confidence 2 123333333 7999999999999654 455557799999999975543
No 50
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.92 E-value=3.3e-23 Score=219.71 Aligned_cols=192 Identities=17% Similarity=0.265 Sum_probs=161.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++|+.||.|++||+.+++.+..+.+ |...|.+++|++ . +|++|+.||.|++||++.....+..+..|
T Consensus 141 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 216 (401)
T 4aez_A 141 KWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG-HQARVGCLSWNR--H-VLSSGSRSGAIHHHDVRIANHQIGTLQGH 216 (401)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EECCCCCEEEEECCCCeEEEEECcCCeEEEEecC-CCCceEEEEECC--C-EEEEEcCCCCEEEEecccCcceeeEEcCC
Confidence 4899999999999999999999999999998885 677888999953 3 89999999999999998666567888999
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCC-CEEEEEE--cCCeEEEEECCCCCC
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDD-WILTAGT--SNGRVVFYDIRGKPQ 156 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG-~~LatGs--~DGsV~IWDlrs~~k 156 (633)
...|.+++|+|++++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++ .++++|+ .||.|++||+++. +
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~-~ 295 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG-A 295 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC-C
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC-C
Confidence 999999999999999999999999999999998888776 689999999999976 4555654 6999999999987 3
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 157 ~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
++..+. +...|.+++|+|+++++++++ +..|+.|++||+..
T Consensus 296 ~~~~~~---~~~~v~~~~~s~~~~~l~~~~----------g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 296 RVNTVD---AGSQVTSLIWSPHSKEIMSTH----------GFPDNNLSIWSYSS 336 (401)
T ss_dssp EEEEEE---CSSCEEEEEECSSSSEEEEEE----------CTTTCEEEEEEEET
T ss_pred EEEEEe---CCCcEEEEEECCCCCeEEEEe----------ecCCCcEEEEecCC
Confidence 444443 678899999999877765531 23467777777654
No 51
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=3.1e-24 Score=225.90 Aligned_cols=207 Identities=13% Similarity=0.148 Sum_probs=171.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++++.||.|++||+.+++....+..+ ..+....|+++++ +|++|+.||.|+|||+.+... ...+..|
T Consensus 63 ~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~h 138 (420)
T 3vl1_A 63 TFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA--DYTAVDTAKLQMR-RFILGTTEGDIKVLDSNFNLQ-REIDQAH 138 (420)
T ss_dssp EEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC--CEEEEEEECSSSC-EEEEEETTSCEEEECTTSCEE-EEETTSS
T ss_pred eeeecCCeEEEEEcCCcEEEEEecccceeeEEecC--CceEEEEEecCCC-EEEEEECCCCEEEEeCCCcce-eeecccc
Confidence 48999999999999999999999877665555532 5566667889987 899999999999999987763 5666799
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~ 159 (633)
...|++++|+|++++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++.+|++++.||.|++||+++. +.+.
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~ 217 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTG-TTIH 217 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT-EEEE
T ss_pred cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC-ceeE
Confidence 999999999999999999999999999999998887777 58999999999999999999999999999999987 3444
Q ss_pred EEeec-CCCCCeeEEEEccCCCe---------EEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 160 VLRAC-SSSEAVSSLCWQRAKPV---------FIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 160 ~l~~~-~H~~~VtsLafsPdg~~---------Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
.+... .|...|.+++|.+.+.. +.......++.++++++.|+.|++||++...
T Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 218 TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE 280 (420)
T ss_dssp EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC
T ss_pred EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc
Confidence 44422 47788999998765332 1122245678889999999999999997543
No 52
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5.6e-23 Score=209.90 Aligned_cols=194 Identities=13% Similarity=0.192 Sum_probs=160.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCC---------------------------------------------
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDP--------------------------------------------- 35 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~--------------------------------------------- 35 (633)
+|+|++++|++++.||.|++||+.+++.+..+...
T Consensus 81 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 81 DVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc
Confidence 36778888888888888888888776655444310
Q ss_pred -----------CC--CcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCC
Q 006743 36 -----------NE--QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD 102 (633)
Q Consensus 36 -----------~~--~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~D 102 (633)
+. ..+.+++|+|+++ +|++++.||.|++||+......+..+..|...|.+++|+|++++|++++.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 239 (369)
T 3zwl_B 161 VSEEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRD 239 (369)
T ss_dssp ECSSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred cccceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCC
Confidence 01 1566777777776 788889999999999988544577788899999999999999999999999
Q ss_pred CeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCC--------------eEEEEECCCCCCceEEEeecCCCC
Q 006743 103 KKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNG--------------RVVFYDIRGKPQPLTVLRACSSSE 168 (633)
Q Consensus 103 GtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DG--------------sV~IWDlrs~~k~v~~l~~~~H~~ 168 (633)
+.|++||+++++.+..+.+...+.+++|+|++.++++++.++ .|++||..+. +++..+. +|..
T Consensus 240 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~--~~~~ 316 (369)
T 3zwl_B 240 TNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE-EEIGRVQ--GHFG 316 (369)
T ss_dssp SEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC-CEEEEEE--CCSS
T ss_pred ceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC-cchhhee--cccC
Confidence 999999999999999888999999999999999999999988 8999999987 3445554 7999
Q ss_pred CeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 169 AVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 169 ~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
.|++++|+|+++ +|++++.|+.|++||+..
T Consensus 317 ~v~~~~~s~~~~------------~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 317 PLNTVAISPQGT------------SYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp CEEEEEECTTSS------------EEEEEETTSEEEEEEECH
T ss_pred cEEEEEECCCCC------------EEEEEcCCCeEEEEECcc
Confidence 999999999654 455567899999999864
No 53
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.92 E-value=6.2e-24 Score=221.47 Aligned_cols=200 Identities=17% Similarity=0.174 Sum_probs=167.2
Q ss_pred CCCCE-EEEEECCCcEEEEECCC------CceeE-----EEe------CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEE
Q 006743 4 CKDEH-LASISLSGDLILHNLAS------GAKAA-----ELK------DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLW 65 (633)
Q Consensus 4 pdG~~-LaSgs~DG~I~IWDl~t------gk~v~-----~~~------~~~~~~VssLafSpdg~~lLaSGs~DGtI~IW 65 (633)
+++++ |++++.||.|++||+.+ ++.+. .+. ..+...|.+++|+|++ +|++++.||.|++|
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQIS 212 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEE
Confidence 89999 99999999999999988 66665 664 3456778899999998 79999999999999
Q ss_pred ECCCCCceeEEecc---C---CCCeEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceeeEe-e-------------CC
Q 006743 66 DTTGRSPKVSWLKQ---H---SAPTAGISFSSDDKIIASVGLD---KKLYTYDPGSRRPSSCI-T-------------YE 122 (633)
Q Consensus 66 Dl~t~~~~v~~l~~---H---~~~VtsLafSPdg~~LaSgS~D---GtVrIWDlrtgk~v~~i-~-------------h~ 122 (633)
|+++.+. +..+.. | ...|.+++|+|++++|++++.| +.|++||+++++.+..+ . |.
T Consensus 213 d~~~~~~-~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (397)
T 1sq9_A 213 ELSTLRP-LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS 291 (397)
T ss_dssp ETTTTEE-EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBS
T ss_pred ECCCCce-eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccC
Confidence 9988764 566777 8 9999999999999999999999 99999999999888777 4 88
Q ss_pred CCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeec----CC---------------CCCeeEEEEccCCCeEE
Q 006743 123 APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRAC----SS---------------SEAVSSLCWQRAKPVFI 183 (633)
Q Consensus 123 ~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~----~H---------------~~~VtsLafsPdg~~La 183 (633)
..|.+++|+|++++|++++.||.|+|||+++. +++..+... +| ...|++++|+|++++++
T Consensus 292 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~ 370 (397)
T 1sq9_A 292 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK-ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSG 370 (397)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBS
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC-ceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccc
Confidence 99999999999999999999999999999987 344444411 45 89999999999876665
Q ss_pred EeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 184 DETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 184 s~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
.+ ..+..++++++.|+.|++||+.
T Consensus 371 ~~--~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 371 MG--ADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp TT--CTTSCEEEEEETTTEEEEEEEE
T ss_pred cc--ccccceEEEecCCCcEEEEEcC
Confidence 54 2355788888999999999974
No 54
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.92 E-value=7.3e-24 Score=216.37 Aligned_cols=196 Identities=12% Similarity=0.206 Sum_probs=160.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-eeEEEeCCC---CCcEEEEE----EccCCCeEEEEEeCCCeEEEEECCCCCc
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGA-KAAELKDPN---EQVLRVLD----YSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk-~v~~~~~~~---~~~VssLa----fSpdg~~lLaSGs~DGtI~IWDl~t~~~ 72 (633)
+|++++++|++++.||.|++||+.+++ .+..+..+. ...+.+++ |++++. +|++++.||.|++||+++.+.
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMAL 202 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTTEE
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccCce
Confidence 478999999999999999999999887 677775433 34788888 678887 899999999999999998873
Q ss_pred eeEEeccCCCCeEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCceeeEe------eCCCCeEEEEEecCCC-EEEEEEc
Q 006743 73 KVSWLKQHSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGSRRPSSCI------TYEAPFSSLAFIDDDW-ILTAGTS 142 (633)
Q Consensus 73 ~v~~l~~H~~~VtsLafSP---dg~~LaSgS~DGtVrIWDlrtgk~v~~i------~h~~~ItsLafSPdG~-~LatGs~ 142 (633)
.....|...|.+++|+| ++.+|++++.|+.|++||+++++....+ .|...|.+++|+|++. +|++++.
T Consensus 203 --~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 280 (357)
T 3i2n_A 203 --RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGG 280 (357)
T ss_dssp --EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred --eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeC
Confidence 45577899999999999 9999999999999999999886654333 5899999999999998 8999999
Q ss_pred CCeEEEEECCCCCCc----------------eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcc
Q 006743 143 NGRVVFYDIRGKPQP----------------LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMP 206 (633)
Q Consensus 143 DGsV~IWDlrs~~k~----------------v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIW 206 (633)
||.|++||++..... .......+|...|++++|+|++++++ ++++.|+.|++|
T Consensus 281 dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-----------~s~~~d~~i~iw 349 (357)
T 3i2n_A 281 AGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLC-----------VCSSFDQTVRVL 349 (357)
T ss_dssp TSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEE-----------EEEETTSEEEEE
T ss_pred CCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEE-----------EEecCCCcEEEE
Confidence 999999999865332 12223337999999999999765543 245779999999
Q ss_pred CCCC
Q 006743 207 DPLP 210 (633)
Q Consensus 207 Dlr~ 210 (633)
|+..
T Consensus 350 ~~~~ 353 (357)
T 3i2n_A 350 IVTK 353 (357)
T ss_dssp EECC
T ss_pred ECCC
Confidence 9864
No 55
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.92 E-value=1.5e-23 Score=222.10 Aligned_cols=194 Identities=14% Similarity=0.216 Sum_probs=155.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-----------eeEEEeCCC-----------CCcEEEEEEccCCC-eEEEEEe
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGA-----------KAAELKDPN-----------EQVLRVLDYSRNSR-HLLVTAG 57 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk-----------~v~~~~~~~-----------~~~VssLafSpdg~-~lLaSGs 57 (633)
+|+|+|++||+|+.||.|+|||+.+++ ....+.+|. ...|.+++|+|++. .+|++++
T Consensus 35 ~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s 114 (447)
T 3dw8_B 35 EFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLST 114 (447)
T ss_dssp EECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeC
Confidence 489999999999999999999998876 467777643 16789999999973 3899999
Q ss_pred CCCeEEEEECCCCCce---------------------------------------eEEeccCCCCeEEEEEcCCCCEEEE
Q 006743 58 DDGTLHLWDTTGRSPK---------------------------------------VSWLKQHSAPTAGISFSSDDKIIAS 98 (633)
Q Consensus 58 ~DGtI~IWDl~t~~~~---------------------------------------v~~l~~H~~~VtsLafSPdg~~LaS 98 (633)
.|+.|+|||+...... .....+|...|++++|+|++++|++
T Consensus 115 ~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 194 (447)
T 3dw8_B 115 NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLS 194 (447)
T ss_dssp CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEE
T ss_pred CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEE
Confidence 9999999998653311 1224689999999999999999999
Q ss_pred EeCCCeEEEEeCCC-CceeeEe--------eCCCCeEEEEEecCC-CEEEEEEcCCeEEEEECCCCCCc---eEEEeecC
Q 006743 99 VGLDKKLYTYDPGS-RRPSSCI--------TYEAPFSSLAFIDDD-WILTAGTSNGRVVFYDIRGKPQP---LTVLRACS 165 (633)
Q Consensus 99 gS~DGtVrIWDlrt-gk~v~~i--------~h~~~ItsLafSPdG-~~LatGs~DGsV~IWDlrs~~k~---v~~l~~~~ 165 (633)
| .|+.|++||+++ ++.+..+ .|...|.+++|+|++ .+|++|+.||.|++||+++.... +..+. .
T Consensus 195 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~ 271 (447)
T 3dw8_B 195 A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFE--E 271 (447)
T ss_dssp E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEEC--C
T ss_pred e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEec--c
Confidence 8 799999999994 4444432 588999999999998 99999999999999999987431 45555 5
Q ss_pred CCC------------CeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 166 SSE------------AVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 166 H~~------------~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
|.. .|.+++|+|++++| ++++. +.|++||++.
T Consensus 272 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l------------~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 272 PEDPSNRSFFSEIISSISDVKFSHSGRYM------------MTRDY-LSVKVWDLNM 315 (447)
T ss_dssp C-----CCHHHHHTTCEEEEEECTTSSEE------------EEEES-SEEEEEETTC
T ss_pred CCCccccccccccCceEEEEEECCCCCEE------------EEeeC-CeEEEEeCCC
Confidence 554 89999999965554 44465 9999999975
No 56
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.1e-23 Score=214.24 Aligned_cols=196 Identities=13% Similarity=0.186 Sum_probs=161.9
Q ss_pred CccCC--CCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ce
Q 006743 1 MYNCK--DEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PK 73 (633)
Q Consensus 1 AFSpd--G~~LaSgs~DG~I~IWDl~tgk--~v~~~~~~~~~~VssLafSpd--g~~lLaSGs~DGtI~IWDl~t~~-~~ 73 (633)
+|+++ +++|++|+.||.|++||+.+++ .+..+.. |...|.+++|+|+ +. +|++++.|+.|++||+.... ..
T Consensus 62 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~ 139 (379)
T 3jrp_A 62 DWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS 139 (379)
T ss_dssp EECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCC
T ss_pred EeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecC-CCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCcee
Confidence 36666 8999999999999999999887 5555554 6778999999999 76 89999999999999998763 23
Q ss_pred eEEeccCCCCeEEEEEcC-------------CCCEEEEEeCCCeEEEEeCCCCcee----eEe-eCCCCeEEEEEecC--
Q 006743 74 VSWLKQHSAPTAGISFSS-------------DDKIIASVGLDKKLYTYDPGSRRPS----SCI-TYEAPFSSLAFIDD-- 133 (633)
Q Consensus 74 v~~l~~H~~~VtsLafSP-------------dg~~LaSgS~DGtVrIWDlrtgk~v----~~i-~h~~~ItsLafSPd-- 133 (633)
...+..|...|.+++|+| ++.+|++++.|+.|++||++++... ..+ .|...|.+++|+|+
T Consensus 140 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 219 (379)
T 3jrp_A 140 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 219 (379)
T ss_dssp EEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCC
Confidence 456778999999999999 6999999999999999999876532 223 48899999999999
Q ss_pred -CCEEEEEEcCCeEEEEECCCCCCce--EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 134 -DWILTAGTSNGRVVFYDIRGKPQPL--TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 134 -G~~LatGs~DGsV~IWDlrs~~k~v--~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+.+|++++.||.|++||++...... ..+....|...|++++|+|++++|+ +++.|+.|++||+..
T Consensus 220 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~------------~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 220 LRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLA------------LSGGDNKVTLWKENL 287 (379)
T ss_dssp SSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEE------------EEESSSSEEEEEEEE
T ss_pred CCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEE------------EecCCCcEEEEeCCC
Confidence 8999999999999999999864332 2333335889999999999765554 446699999999864
No 57
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.92 E-value=2.6e-23 Score=213.93 Aligned_cols=193 Identities=8% Similarity=0.027 Sum_probs=162.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEe-CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc---eeEE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---KVSW 76 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~-~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~---~v~~ 76 (633)
+|+|++++|++++.||.|++||+.+++....+. ..+...|.+++|+|+++ +|++++.|+.|++||+..... ....
T Consensus 59 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~ 137 (372)
T 1k8k_C 59 DWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHI 137 (372)
T ss_dssp EEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEE
T ss_pred EEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeee
Confidence 488999999999999999999998887555443 34677899999999987 899999999999999987663 2334
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCC------------------CCceeeEe-eCCCCeEEEEEecCCCEE
Q 006743 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPG------------------SRRPSSCI-TYEAPFSSLAFIDDDWIL 137 (633)
Q Consensus 77 l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlr------------------tgk~v~~i-~h~~~ItsLafSPdG~~L 137 (633)
...|...|.+++|+|++++|++++.|+.|++||++ .++.+..+ .|...|.+++|+|++.+|
T Consensus 138 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 217 (372)
T 1k8k_C 138 KKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRV 217 (372)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEE
T ss_pred ecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEE
Confidence 46789999999999999999999999999999964 56666666 688999999999999999
Q ss_pred EEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 138 TAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 138 atGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
++++.||.|++||+++. +++..+. .|...|.+++|+|+++ +++++ .|+.|++||++.
T Consensus 218 ~~~~~d~~i~i~d~~~~-~~~~~~~--~~~~~v~~~~~~~~~~------------~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 218 AWVSHDSTVCLADADKK-MAVATLA--SETLPLLAVTFITESS------------LVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEETTTEEEEEEGGGT-TEEEEEE--CSSCCEEEEEEEETTE------------EEEEE-TTSSCEEEEEET
T ss_pred EEEeCCCEEEEEECCCC-ceeEEEc--cCCCCeEEEEEecCCC------------EEEEE-eCCeEEEEEccC
Confidence 99999999999999987 3455555 7889999999999544 44444 689999999865
No 58
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.92 E-value=2.1e-23 Score=237.70 Aligned_cols=194 Identities=15% Similarity=0.199 Sum_probs=162.2
Q ss_pred CccCCC-CEEEEEECCCcEEEEECCCCc-----eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 006743 1 MYNCKD-EHLASISLSGDLILHNLASGA-----KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (633)
Q Consensus 1 AFSpdG-~~LaSgs~DG~I~IWDl~tgk-----~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v 74 (633)
+|++++ ++|++|+.||.|+|||+.+.. ....+.+ |...|.+++|+|+++ +|++|+.||.|+|||+.++.. .
T Consensus 389 ~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-h~~~v~~v~~s~~g~-~l~sgs~Dg~v~vwd~~~~~~-~ 465 (694)
T 3dm0_A 389 ATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-HSHFVEDVVLSSDGQ-FALSGSWDGELRLWDLAAGVS-T 465 (694)
T ss_dssp ECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-E
T ss_pred EecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecC-CCCcEEEEEECCCCC-EEEEEeCCCcEEEEECCCCcc-e
Confidence 366664 799999999999999997532 3455665 677889999999998 899999999999999988764 5
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe----eCCCCeEEEEEecCC--CEEEEEEcCCeEEE
Q 006743 75 SWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI----TYEAPFSSLAFIDDD--WILTAGTSNGRVVF 148 (633)
Q Consensus 75 ~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i----~h~~~ItsLafSPdG--~~LatGs~DGsV~I 148 (633)
..+.+|...|.+++|+|++++|++|+.|++|++||+......... .|...|.+++|+|++ .+|++|+.||.|++
T Consensus 466 ~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~v 545 (694)
T 3dm0_A 466 RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKV 545 (694)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred eEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEE
Confidence 678899999999999999999999999999999998765444332 477889999999986 68999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 149 WDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
||+++. +....+. +|.+.|++++|+|+++ ++++++.|+.|++||++...
T Consensus 546 wd~~~~-~~~~~~~--~h~~~v~~v~~spdg~------------~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 546 WNLSNC-KLRSTLA--GHTGYVSTVAVSPDGS------------LCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp EETTTC-CEEEEEC--CCSSCEEEEEECTTSS------------EEEEEETTSBCEEEETTTTE
T ss_pred EECCCC-cEEEEEc--CCCCCEEEEEEeCCCC------------EEEEEeCCCeEEEEECCCCc
Confidence 999987 3444444 8999999999999654 45556789999999997543
No 59
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.91 E-value=1.1e-22 Score=217.41 Aligned_cols=197 Identities=13% Similarity=0.213 Sum_probs=159.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCC----------------------------------------CCCcE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDP----------------------------------------NEQVL 40 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~----------------------------------------~~~~V 40 (633)
+|+|+|++|++|+.||.|+|||+.+++.+..+.+| |...+
T Consensus 154 ~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~ 233 (420)
T 4gga_A 154 AWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV 233 (420)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE
T ss_pred EECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccce
Confidence 58999999999999999999999888766555431 33345
Q ss_pred EEEEEccCCCeEEEEEeCCCeEEEEECCCCCc---eeEEeccCCCCeEEEEEcC-CCCEEEEE--eCCCeEEEEeCCCCc
Q 006743 41 RVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---KVSWLKQHSAPTAGISFSS-DDKIIASV--GLDKKLYTYDPGSRR 114 (633)
Q Consensus 41 ssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~---~v~~l~~H~~~VtsLafSP-dg~~LaSg--S~DGtVrIWDlrtgk 114 (633)
..+.|++++. ++++++.|+.|+|||....+. .+.....|...|.+++|+| +..+++++ +.|++|++||+++++
T Consensus 234 ~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~ 312 (420)
T 4gga_A 234 CGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA 312 (420)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE
T ss_pred eeeeecCCCC-eeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc
Confidence 5566777776 678888888888888865442 2456678999999999999 55666654 579999999999999
Q ss_pred eeeEeeCCCCeEEEEEecCCCEEEEEE--cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCe
Q 006743 115 PSSCITYEAPFSSLAFIDDDWILTAGT--SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAET 192 (633)
Q Consensus 115 ~v~~i~h~~~ItsLafSPdG~~LatGs--~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~ 192 (633)
+...+.+...+.++.|++++..+++++ .||.|+|||+++. +++..+. +|.+.|++++|+|+|++
T Consensus 313 ~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~-~~v~~l~--gH~~~V~~l~~spdg~~----------- 378 (420)
T 4gga_A 313 CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELK--GHTSRVLSLTMSPDGAT----------- 378 (420)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEEC--CCSSCEEEEEECTTSSC-----------
T ss_pred cceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC-cEEEEEc--CCCCCEEEEEEcCCCCE-----------
Confidence 999998888999999999999998776 6899999999987 4555555 89999999999996555
Q ss_pred EEEEeeCCCeEEccCCCCCCC
Q 006743 193 ALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 193 lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
|++++.|++|++||+....+
T Consensus 379 -l~S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 379 -VASAAADETLRLWRCFELDP 398 (420)
T ss_dssp -EEEEETTTEEEEECCSCSSC
T ss_pred -EEEEecCCeEEEEECCCCCc
Confidence 45557899999999976554
No 60
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.91 E-value=6.3e-24 Score=217.12 Aligned_cols=197 Identities=14% Similarity=0.144 Sum_probs=163.0
Q ss_pred CccCC----CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCCceeE
Q 006743 1 MYNCK----DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (633)
Q Consensus 1 AFSpd----G~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSp-dg~~lLaSGs~DGtI~IWDl~t~~~~v~ 75 (633)
+|+++ |++|++|+.||.|++||+.+++.+..+.+ |...|.+++|+| ++. +|++|+.||.|++||+.+.+. +.
T Consensus 76 ~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~-~~ 152 (366)
T 3k26_A 76 AWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG-HGNAINELKFHPRDPN-LLLSVSKDHALRLWNIQTDTL-VA 152 (366)
T ss_dssp EEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES-CCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTTTEE-EE
T ss_pred EeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC-CCCcEEEEEECCCCCC-EEEEEeCCCeEEEEEeecCeE-EE
Confidence 36777 67999999999999999999999998886 677899999999 665 899999999999999988774 44
Q ss_pred Ee---ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-----------------------------eCCC
Q 006743 76 WL---KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-----------------------------TYEA 123 (633)
Q Consensus 76 ~l---~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-----------------------------~h~~ 123 (633)
.+ ..|...|.+++|+|++++|++++.|+.|++||+++++....+ .|..
T Consensus 153 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T 3k26_A 153 IFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRN 232 (366)
T ss_dssp EECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSS
T ss_pred EecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcc
Confidence 55 689999999999999999999999999999999987654332 1889
Q ss_pred CeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc-----------eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCe
Q 006743 124 PFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP-----------LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAET 192 (633)
Q Consensus 124 ~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~-----------v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~ 192 (633)
.|.+++|+ +++|++++.||.|++||+++.... ........|...|++++|+|+ .++.
T Consensus 233 ~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----------~~~~ 300 (366)
T 3k26_A 233 YVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMD----------FWQK 300 (366)
T ss_dssp CCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEEC----------TTSS
T ss_pred eEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCC----------CCCc
Confidence 99999999 779999999999999999876431 112222378889999999985 0145
Q ss_pred EEEEeeCCCeEEccCCCCCC
Q 006743 193 ALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 193 lLlSgs~Dg~IkIWDlr~~~ 212 (633)
++++++.|+.|++||+....
T Consensus 301 ~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 301 MLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp EEEEECTTSCEEEEECCSSS
T ss_pred EEEEEecCCcEEEEECCCCC
Confidence 55666789999999996543
No 61
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.91 E-value=4.5e-23 Score=226.49 Aligned_cols=187 Identities=21% Similarity=0.334 Sum_probs=160.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++|+.||.|++||. +++.+..+.+ |...|.+++|+|+++ +|++++.|+.|++||.... .+..+.+|
T Consensus 351 ~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~-~~~~v~~~~~s~dg~-~l~~~~~d~~v~~~~~~~~--~~~~~~~~ 425 (577)
T 2ymu_A 351 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRNGQ--LLQTLTGH 425 (577)
T ss_dssp EECTTSSEEEEEETTSEEEEEET-TCCEEEEEEC-CSSCEEEEEECTTSS-CEEEEETTSEEEEECTTCC--EEEEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecC-CCCCeEEEEECCCCC-EEEEEeCCCEEEEEeCCCC--EEEEecCC
Confidence 48999999999999999999995 6778888876 667789999999998 7999999999999997543 36778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~ 160 (633)
...|++++|+|++++|++++.|+.|++||...........|...|.+++|+|++++|++++.|+.|++||... +.+..
T Consensus 426 ~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~--~~~~~ 503 (577)
T 2ymu_A 426 SSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQT 503 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS--CEEEE
T ss_pred CCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC--CEEEE
Confidence 9999999999999999999999999999975443333447999999999999999999999999999999643 34555
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 161 l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
+. +|...|++++|+|++++| ++++.|+.|++||.
T Consensus 504 ~~--~h~~~v~~l~~s~dg~~l------------~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 504 LT--GHSSSVRGVAFSPDGQTI------------ASASDDKTVKLWNR 537 (577)
T ss_dssp EE--CCSSCEEEEEECTTSSCE------------EEEETTSEEEEECT
T ss_pred Ee--CCCCCEEEEEEcCCCCEE------------EEEECcCEEEEEeC
Confidence 55 899999999999976555 45577999999995
No 62
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.91 E-value=2.9e-23 Score=216.97 Aligned_cols=205 Identities=15% Similarity=0.179 Sum_probs=168.9
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEEeCCC--CCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006743 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELKDPN--EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (633)
Q Consensus 1 AFSp-dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~--~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l 77 (633)
+|+| ++++|++++.||.|++||+.+ ..+..+..+. ...|.+++|+|++. +|++|+.|+.|++||++.. .+..+
T Consensus 125 ~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~--~~~~~ 200 (383)
T 3ei3_B 125 KFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLDGH--EIFKE 200 (383)
T ss_dssp EEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETTSC--EEEEE
T ss_pred EeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECCCC--EEEEe
Confidence 4788 678999999999999999975 5666665543 46799999999998 8999999999999999543 36778
Q ss_pred ccCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEeCCC----CceeeEeeCCCCeEEEEEec-CCCEEEEEEcCCeEEEEEC
Q 006743 78 KQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGS----RRPSSCITYEAPFSSLAFID-DDWILTAGTSNGRVVFYDI 151 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg~-~LaSgS~DGtVrIWDlrt----gk~v~~i~h~~~ItsLafSP-dG~~LatGs~DGsV~IWDl 151 (633)
..|...|.+++|+|+++ +|++++.|+.|++||+++ +.++..+.|...|.+++|+| ++.+|++++.||.|++||+
T Consensus 201 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~ 280 (383)
T 3ei3_B 201 KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSS 280 (383)
T ss_dssp ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEET
T ss_pred ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEEC
Confidence 89999999999999988 999999999999999998 66777778999999999999 9999999999999999999
Q ss_pred CCCCCceEEEe----ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 152 RGKPQPLTVLR----ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 152 rs~~k~v~~l~----~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
++......... ...|...+. +.|+|++..++.+ ...++.+ +++.|+.|++||+.....
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~-~s~dg~~--s~s~d~~i~iwd~~~~~~ 342 (383)
T 3ei3_B 281 YDWSKPDQIIIHPHRQFQHLTPIK-ATWHPMYDLIVAG-RYPDDQL--LLNDKRTIDIYDANSGGL 342 (383)
T ss_dssp TBTTSCSEEEECCBCCCTTSCCCC-CEECSSSSEEEEE-CBCCTTT--CTTCCCCEEEEETTTCCE
T ss_pred CCCccccccccccccccccccceE-EeccCCCCceEEE-ecCCccc--ccCCCCeEEEEecCCCce
Confidence 98754433321 123556666 5899988888766 3445555 778899999999865443
No 63
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=2.7e-23 Score=212.15 Aligned_cols=178 Identities=19% Similarity=0.293 Sum_probs=148.1
Q ss_pred CccCC---CCEEEEEECCCcEEEEECCC-Ccee-EEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE
Q 006743 1 MYNCK---DEHLASISLSGDLILHNLAS-GAKA-AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (633)
Q Consensus 1 AFSpd---G~~LaSgs~DG~I~IWDl~t-gk~v-~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~ 75 (633)
+|+|+ |++|++|+.||.|+|||+.+ +..+ ..+.+ |...|.+++|+|+++ +|++++.||.|++||+.+.. ..
T Consensus 46 ~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~--~~ 121 (368)
T 3mmy_A 46 SFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGS-KVFTASCDKTAKMWDLSSNQ--AI 121 (368)
T ss_dssp EECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTE--EE
T ss_pred EEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCC-EEEEEcCCCcEEEEEcCCCC--ce
Confidence 47888 69999999999999999987 5555 45554 778899999999988 89999999999999999887 34
Q ss_pred EeccCCCCeEEEEE--cCCCCEEEEEeCCCeEEEEeCCCCceeeEe----------------------------------
Q 006743 76 WLKQHSAPTAGISF--SSDDKIIASVGLDKKLYTYDPGSRRPSSCI---------------------------------- 119 (633)
Q Consensus 76 ~l~~H~~~VtsLaf--SPdg~~LaSgS~DGtVrIWDlrtgk~v~~i---------------------------------- 119 (633)
.+..|...|.+++| ++++++|++++.|+.|++||+++++.+..+
T Consensus 122 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 201 (368)
T 3mmy_A 122 QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQP 201 (368)
T ss_dssp EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSC
T ss_pred eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEecccc
Confidence 46789999999999 889999999999999999999876432111
Q ss_pred ---------------------------------------------------------eCCC------------CeEEEEE
Q 006743 120 ---------------------------------------------------------TYEA------------PFSSLAF 130 (633)
Q Consensus 120 ---------------------------------------------------------~h~~------------~ItsLaf 130 (633)
.|.. .|.+++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 281 (368)
T 3mmy_A 202 SEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAF 281 (368)
T ss_dssp EEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEE
T ss_pred chhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEE
Confidence 0111 6999999
Q ss_pred ecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006743 131 IDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 131 SPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~ 185 (633)
+|++++|++|+.||.|++||+++. +++..+. .|...|++++|+|++++|+++
T Consensus 282 sp~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~--~~~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 282 HPVHGTLATVGSDGRFSFWDKDAR-TKLKTSE--QLDQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp CTTTCCEEEEETTSCEEEEETTTT-EEEEECC--CCSSCEEEEEECTTSSCEEEE
T ss_pred ecCCCEEEEEccCCeEEEEECCCC-cEEEEec--CCCCCceEEEECCCCCeEEEE
Confidence 999999999999999999999987 3344444 789999999999977776665
No 64
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1e-23 Score=235.85 Aligned_cols=191 Identities=13% Similarity=0.227 Sum_probs=157.0
Q ss_pred CccCC------CCEEEEEECCCcEEEEECCCCce-----------eEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEE
Q 006743 1 MYNCK------DEHLASISLSGDLILHNLASGAK-----------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLH 63 (633)
Q Consensus 1 AFSpd------G~~LaSgs~DG~I~IWDl~tgk~-----------v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~ 63 (633)
+|+|+ +++||+|+.||+|+|||+.+++. ...+.+ |...|.+++|++++ .|++|+.||+|+
T Consensus 214 ~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~-h~~~v~sv~~s~~~--~lasgs~DgtV~ 290 (524)
T 2j04_B 214 KWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL-ADSLITTFDFLSPT--TVVCGFKNGFVA 290 (524)
T ss_dssp EECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC-TTTCEEEEEESSSS--EEEEEETTSEEE
T ss_pred EECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc-CCCCEEEEEecCCC--eEEEEeCCCEEE
Confidence 36665 67999999999999999987642 234554 56789999999863 799999999999
Q ss_pred EEECCCCCceeEEeccCCCCeEEE--EEcCCC-CEEEEEeCCCeEEEEeCCCCceeeEe-eCC--CCeEEEEEecCCCEE
Q 006743 64 LWDTTGRSPKVSWLKQHSAPTAGI--SFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCI-TYE--APFSSLAFIDDDWIL 137 (633)
Q Consensus 64 IWDl~t~~~~v~~l~~H~~~VtsL--afSPdg-~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~--~~ItsLafSPdG~~L 137 (633)
+||+++.......+..|...|++| +|++++ .+|++|+.|++|++||++++++...+ .|. ..|.+++|+|++..+
T Consensus 291 lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l 370 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY 370 (524)
T ss_dssp EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE
T ss_pred EEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeE
Confidence 999987654456688999999999 567787 89999999999999999988776554 343 358899999999999
Q ss_pred EEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 138 TAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 138 atGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
++++.|++|++||+++... +..+. +|.+.|++|+|+|++++| ++++.|+.|++||+.
T Consensus 371 ~s~~~d~tv~lwd~~~~~~-~~~l~--gH~~~V~sva~Sp~g~~l------------~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 371 IYSDGASSLRAVPSRAAFA-VHPLV--SRETTITAIGVSRLHPMV------------LAGSADGSLIITNAA 427 (524)
T ss_dssp EEECSSSEEEEEETTCTTC-CEEEE--ECSSCEEEEECCSSCCBC------------EEEETTTEEECCBSC
T ss_pred EEeCCCCcEEEEECccccc-ceeee--cCCCceEEEEeCCCCCeE------------EEEECCCEEEEEech
Confidence 9999999999999998743 34444 699999999999976555 455779999999974
No 65
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.91 E-value=3.4e-24 Score=220.99 Aligned_cols=192 Identities=15% Similarity=0.207 Sum_probs=154.6
Q ss_pred ccC--CCCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCCce--
Q 006743 2 YNC--KDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRSPK-- 73 (633)
Q Consensus 2 FSp--dG~~LaSgs~DG~I~IWDl~tgk--~v~~~~~~~~~~VssLafSpd--g~~lLaSGs~DGtI~IWDl~t~~~~-- 73 (633)
|++ ++++|++|+.|+.|+|||+.+++ .+..+.+ |...|.+++|+|+ +. +|++|+.|+.|++||+......
T Consensus 65 ~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 65 WAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAG-HDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp ECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECC-CSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEEE
T ss_pred eCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccC-CCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcce
Confidence 654 48999999999999999998774 4555654 6677899999998 54 8999999999999999875321
Q ss_pred eEEeccCCCCeEEEEEcCC-----------------CCEEEEEeCCCeEEEEeCCCC---ceeeEe-eCCCCeEEEEEec
Q 006743 74 VSWLKQHSAPTAGISFSSD-----------------DKIIASVGLDKKLYTYDPGSR---RPSSCI-TYEAPFSSLAFID 132 (633)
Q Consensus 74 v~~l~~H~~~VtsLafSPd-----------------g~~LaSgS~DGtVrIWDlrtg---k~v~~i-~h~~~ItsLafSP 132 (633)
...+..|...|.+++|+|+ +++|++|+.|++|++||++.. +++..+ .|...|.+++|+|
T Consensus 143 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp 222 (316)
T 3bg1_A 143 KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP 222 (316)
T ss_dssp CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC
T ss_pred eeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC
Confidence 3446789999999999997 478999999999999999765 233334 5899999999999
Q ss_pred CC----CEEEEEEcCCeEEEEECCCCC---CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEc
Q 006743 133 DD----WILTAGTSNGRVVFYDIRGKP---QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILM 205 (633)
Q Consensus 133 dG----~~LatGs~DGsV~IWDlrs~~---k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkI 205 (633)
++ .+|++|+.||+|+|||++... .....+. .|...|.+++|+|++++|+ +++.|+.|++
T Consensus 223 ~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~~la------------s~~~D~~v~l 288 (316)
T 3bg1_A 223 SIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITANILA------------VSGGDNKVTL 288 (316)
T ss_dssp CSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTCCEE------------EEESSSCEEE
T ss_pred CCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCCEEE------------EEcCCCeEEE
Confidence 86 899999999999999998631 1223333 5789999999999765554 4577999999
Q ss_pred cCCC
Q 006743 206 PDPL 209 (633)
Q Consensus 206 WDlr 209 (633)
|++.
T Consensus 289 w~~~ 292 (316)
T 3bg1_A 289 WKES 292 (316)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9874
No 66
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.91 E-value=2.3e-23 Score=212.71 Aligned_cols=199 Identities=14% Similarity=0.203 Sum_probs=164.5
Q ss_pred CccCC---CCEEEEEECCCcEEEEECCCCc-eeEEEeCCCCCcEEEEEE------ccCCCeEEEEEeCCCeEEEEECCCC
Q 006743 1 MYNCK---DEHLASISLSGDLILHNLASGA-KAAELKDPNEQVLRVLDY------SRNSRHLLVTAGDDGTLHLWDTTGR 70 (633)
Q Consensus 1 AFSpd---G~~LaSgs~DG~I~IWDl~tgk-~v~~~~~~~~~~VssLaf------Spdg~~lLaSGs~DGtI~IWDl~t~ 70 (633)
+|+|+ |++|++|+.||.|++||+.+++ .+..+.+ |...|.+++| +++++ +|++++.||.|++||+...
T Consensus 72 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~ 149 (357)
T 3i2n_A 72 TFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKG-HKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQK 149 (357)
T ss_dssp ECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECC-CSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSC
T ss_pred EEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEe-cccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCC
Confidence 47787 7999999999999999999888 7777775 6777888965 57777 8999999999999999887
Q ss_pred CceeEEeccCCC----CeEEEE----EcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEec---CCCEEEE
Q 006743 71 SPKVSWLKQHSA----PTAGIS----FSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFID---DDWILTA 139 (633)
Q Consensus 71 ~~~v~~l~~H~~----~VtsLa----fSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSP---dG~~Lat 139 (633)
...+..+..|.. .|.+++ |+|++++|++++.|+.|++||+++++......+...|.+++|+| ++.+|++
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 229 (357)
T 3i2n_A 150 DDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVA 229 (357)
T ss_dssp SSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEE
T ss_pred CCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEE
Confidence 644566665554 899998 67899999999999999999999999887778999999999999 9999999
Q ss_pred EEcCCeEEEEECCCCCCceE--EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 140 GTSNGRVVFYDIRGKPQPLT--VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 140 Gs~DGsV~IWDlrs~~k~v~--~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
++.||.|++||+++...... .....+|...|++++|+|+++ .++++++.|+.|++||++...
T Consensus 230 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----------~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 230 TSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR-----------ELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE-----------EEEEEEETTSEEEEEEEECCS
T ss_pred ECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC-----------cEEEEEeCCCcEEEeecCCCc
Confidence 99999999999987532211 112237999999999999533 256677889999999986543
No 67
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.91 E-value=2.4e-23 Score=223.67 Aligned_cols=196 Identities=20% Similarity=0.328 Sum_probs=166.0
Q ss_pred CccCC-CCEEEEEECCCcEEEEECCC----------CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Q 006743 1 MYNCK-DEHLASISLSGDLILHNLAS----------GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG 69 (633)
Q Consensus 1 AFSpd-G~~LaSgs~DG~I~IWDl~t----------gk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t 69 (633)
+|+|+ +++|++++.||.|+|||+.. .+.+..+.+ |...|.+++|+|++..+|++|+.||.|+|||+..
T Consensus 135 ~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 213 (430)
T 2xyi_A 135 RYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRG-HQKEGYGLSWNPNLNGYLLSASDDHTICLWDINA 213 (430)
T ss_dssp EEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEEC-CSSCCCCEEECTTSTTEEEEECTTSCEEEEETTS
T ss_pred EECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecC-CCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCC
Confidence 47886 67999999999999999976 566777776 5667888999999877899999999999999987
Q ss_pred CCce------eEEeccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEeCCCC---ceeeEe-eCCCCeEEEEEecCCC-EE
Q 006743 70 RSPK------VSWLKQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSR---RPSSCI-TYEAPFSSLAFIDDDW-IL 137 (633)
Q Consensus 70 ~~~~------v~~l~~H~~~VtsLafSP-dg~~LaSgS~DGtVrIWDlrtg---k~v~~i-~h~~~ItsLafSPdG~-~L 137 (633)
.... ...+..|...|.+++|+| ++.+|++++.|+.|++||++++ +.+..+ .|...|.+++|+|++. +|
T Consensus 214 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l 293 (430)
T 2xyi_A 214 TPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFIL 293 (430)
T ss_dssp CCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEE
T ss_pred CCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEE
Confidence 3311 345678999999999999 7889999999999999999987 455555 6889999999999887 68
Q ss_pred EEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 138 TAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 138 atGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
++|+.||.|++||+++...++..+. .|...|++++|+|+++ .++++++.|+.|++||+..
T Consensus 294 ~tg~~dg~v~vwd~~~~~~~~~~~~--~h~~~v~~i~~sp~~~-----------~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 294 ATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNE-----------TILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEEETTSEEEEEETTCTTSCSEEEE--CCSSCEEEEEECSSCT-----------TEEEEEETTSCCEEEEGGG
T ss_pred EEEeCCCeEEEEeCCCCCCCeEEee--cCCCCEEEEEECCCCC-----------CEEEEEeCCCcEEEEeCCC
Confidence 8999999999999998667777776 7999999999999643 4566677899999999865
No 68
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.91 E-value=8.7e-24 Score=221.33 Aligned_cols=198 Identities=14% Similarity=0.216 Sum_probs=165.7
Q ss_pred CccCC-CCEEEEEECCCcEEEEECCCCceeEEEeCCC-----CCcEEEEEEccCCCeEEEEEeCCC---eEEEEECCCCC
Q 006743 1 MYNCK-DEHLASISLSGDLILHNLASGAKAAELKDPN-----EQVLRVLDYSRNSRHLLVTAGDDG---TLHLWDTTGRS 71 (633)
Q Consensus 1 AFSpd-G~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~-----~~~VssLafSpdg~~lLaSGs~DG---tI~IWDl~t~~ 71 (633)
+|+++ +.+|++++.||.|++||+.+++.+..+..+. ...|.+++|+|++..+|++++.|+ .|++||++...
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC
Confidence 47888 7899999999999999999999988887643 678999999999866899999999 99999998865
Q ss_pred ceeEEec-cCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCC-CEEEEEEcCCeEE
Q 006743 72 PKVSWLK-QHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDD-WILTAGTSNGRVV 147 (633)
Q Consensus 72 ~~v~~l~-~H~~~VtsLafSP-dg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG-~~LatGs~DGsV~ 147 (633)
..+..+. .|...|.+++|+| ++++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++ .+|++++.||.|+
T Consensus 252 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 252 TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 4456677 8999999999999 9999999999999999999999888777 588999999999998 8999999999999
Q ss_pred EEECCCCCCceEE--------------Eeec------------------CCCCCeeEEEEccCCCeEEEeccCCCCeEEE
Q 006743 148 FYDIRGKPQPLTV--------------LRAC------------------SSSEAVSSLCWQRAKPVFIDETTCKAETALL 195 (633)
Q Consensus 148 IWDlrs~~k~v~~--------------l~~~------------------~H~~~VtsLafsPdg~~Las~s~~sd~~lLl 195 (633)
|||+.+....... +... .|..++.+++|+|+|++|+
T Consensus 332 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la------------ 399 (416)
T 2pm9_A 332 VQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQ------------ 399 (416)
T ss_dssp EEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEEC------------
T ss_pred EEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEE------------
Confidence 9999876432211 0000 1567788899998655554
Q ss_pred EeeCCCeEEccCCCC
Q 006743 196 GGAVGDSILMPDPLP 210 (633)
Q Consensus 196 Sgs~Dg~IkIWDlr~ 210 (633)
+++.|+.|+|||+..
T Consensus 400 ~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 400 ITPDGKGVSITNPKI 414 (416)
T ss_dssp BCTTSSCBCCBCCCC
T ss_pred EeCCCCeEEEEEecc
Confidence 446799999999853
No 69
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.91 E-value=1.7e-22 Score=205.27 Aligned_cols=176 Identities=19% Similarity=0.347 Sum_probs=150.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++|+.|+.|++|+............ +...+..+.+.+++. +|++|+.|+.+++||+............|
T Consensus 93 ~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~~~~~~~~~~~ 170 (340)
T 4aow_A 93 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVG-HTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKYTVQDESH 170 (340)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSSC
T ss_pred EECCCCCEEEEEcccccceEEeecccceeeeecC-CCCceeEEEEeecCc-cceeecCCCeEEEEEeCCCceEEEEeccc
Confidence 4899999999999999999999988887777765 455667788999887 79999999999999998777556667789
Q ss_pred CCCeEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc
Q 006743 81 SAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (633)
Q Consensus 81 ~~~VtsLafSPd--g~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~ 157 (633)
...|.+++|+++ ..++++++.|+.|++||+++++.+..+ .|...|.+++|+|++++|++|+.||.|++||+++. ++
T Consensus 171 ~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~-~~ 249 (340)
T 4aow_A 171 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG-KH 249 (340)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT-EE
T ss_pred cCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC-ce
Confidence 999999999984 467899999999999999999888776 68999999999999999999999999999999987 33
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeE
Q 006743 158 LTVLRACSSSEAVSSLCWQRAKPVF 182 (633)
Q Consensus 158 v~~l~~~~H~~~VtsLafsPdg~~L 182 (633)
+..+. +...|.+++|+|++.++
T Consensus 250 ~~~~~---~~~~v~~~~~~~~~~~~ 271 (340)
T 4aow_A 250 LYTLD---GGDIINALCFSPNRYWL 271 (340)
T ss_dssp EEEEE---CSSCEEEEEECSSSSEE
T ss_pred eeeec---CCceEEeeecCCCCcee
Confidence 33333 56789999999865443
No 70
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.91 E-value=1.4e-23 Score=214.49 Aligned_cols=194 Identities=18% Similarity=0.245 Sum_probs=159.1
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEEe--CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce----
Q 006743 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELK--DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK---- 73 (633)
Q Consensus 1 AFSp-dG~~LaSgs~DG~I~IWDl~tgk~v~~~~--~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~---- 73 (633)
+|+| ++++|++|+.||.|++||+.+++.+..+. ..|...|.+++|+|++. +|++++.||.|++||+++.+..
T Consensus 122 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~ 200 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIK 200 (366)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHH
T ss_pred EECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccc
Confidence 4788 89999999999999999999999888873 24778899999999987 8999999999999999865421
Q ss_pred -----------------------eEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--------------e
Q 006743 74 -----------------------VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP--------------S 116 (633)
Q Consensus 74 -----------------------v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~--------------v 116 (633)
......|...|.+++|+ +++|++++.|+.|++||++++.. +
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 278 (366)
T 3k26_A 201 ESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTIL 278 (366)
T ss_dssp HHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEE
T ss_pred eeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchhee
Confidence 12233499999999999 78999999999999999987643 3
Q ss_pred eEe-eCCCCeEEEEEecC--CCEEEEEEcCCeEEEEECCCCCCc---eEEEeecCCCCCeeEEEEccCCCeEEEeccCCC
Q 006743 117 SCI-TYEAPFSSLAFIDD--DWILTAGTSNGRVVFYDIRGKPQP---LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKA 190 (633)
Q Consensus 117 ~~i-~h~~~ItsLafSPd--G~~LatGs~DGsV~IWDlrs~~k~---v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd 190 (633)
..+ .|...|.+++|+|+ +++|++|+.||.|++||+++.... ...+..+.|...|++++|+|++++
T Consensus 279 ~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~--------- 349 (366)
T 3k26_A 279 GRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSI--------- 349 (366)
T ss_dssp EEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSE---------
T ss_pred ccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCe---------
Confidence 333 47889999999999 999999999999999999986432 224443334799999999996544
Q ss_pred CeEEEEeeCCCeEEccCCC
Q 006743 191 ETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 191 ~~lLlSgs~Dg~IkIWDlr 209 (633)
|++++.|+.|++||+.
T Consensus 350 ---l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 350 ---LIAVCDDASIWRWDRL 365 (366)
T ss_dssp ---EEEEETTSEEEEEEC-
T ss_pred ---EEEEeCCCEEEEEEec
Confidence 5555789999999984
No 71
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.91 E-value=1e-22 Score=232.98 Aligned_cols=180 Identities=13% Similarity=0.167 Sum_probs=156.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++|+.||.|+|||+.+++.+..+.. |...|.+++|+|+++ +|++|+.||.|+|||+.+++. +..+..|
T Consensus 20 ~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~~~-~~~~~~~ 96 (814)
T 3mkq_A 20 DFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQV-TETPVRAGKFIARKN-WIIVGSDDFRIRVFNYNTGEK-VVDFEAH 96 (814)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGT-EEEEEETTSEEEEEETTTCCE-EEEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCceEEEEec-CCCcEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcE-EEEEecC
Confidence 5899999999999999999999999999999886 667889999999998 899999999999999998874 6677889
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-ceeeEe-eCCCCeEEEEEec-CCCEEEEEEcCCeEEEEECCCCCCc
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR-RPSSCI-TYEAPFSSLAFID-DDWILTAGTSNGRVVFYDIRGKPQP 157 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtg-k~v~~i-~h~~~ItsLafSP-dG~~LatGs~DGsV~IWDlrs~~k~ 157 (633)
...|++++|+|++++|++++.||.|++||++++ .....+ .|...|.+++|+| ++.+|++++.||.|++||+++....
T Consensus 97 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~ 176 (814)
T 3mkq_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCS
T ss_pred CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 999999999999999999999999999999987 444444 5889999999999 8899999999999999999876443
Q ss_pred eEEEeecCCCCCeeEEEEcc--CCCeEEEe
Q 006743 158 LTVLRACSSSEAVSSLCWQR--AKPVFIDE 185 (633)
Q Consensus 158 v~~l~~~~H~~~VtsLafsP--dg~~Las~ 185 (633)
..... .+...|.+++|+| ++.+++++
T Consensus 177 ~~~~~--~~~~~v~~~~~~~~~~~~~l~~~ 204 (814)
T 3mkq_A 177 FTLTT--GQERGVNYVDYYPLPDKPYMITA 204 (814)
T ss_dssp EEEEC--CCTTCCCEEEECCSTTCCEEEEE
T ss_pred eEEec--CCCCCEEEEEEEECCCCCEEEEE
Confidence 33322 4558899999998 77666644
No 72
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.91 E-value=1.3e-22 Score=210.55 Aligned_cols=199 Identities=15% Similarity=0.191 Sum_probs=164.5
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEEe------------CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC
Q 006743 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELK------------DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT 67 (633)
Q Consensus 1 AFSp-dG~~LaSgs~DG~I~IWDl~tgk~v~~~~------------~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl 67 (633)
+|+| ++++|++|+.||.|++||+.+++....+. ..|...|.+++|+|++..+|++++.||.|++||+
T Consensus 50 ~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 129 (408)
T 4a11_B 50 DIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDT 129 (408)
T ss_dssp EECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEET
T ss_pred EEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeC
Confidence 4889 99999999999999999999877554443 2377889999999955458999999999999999
Q ss_pred CCCCceeEEeccCCCCeEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCC-EEEEEEc
Q 006743 68 TGRSPKVSWLKQHSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDW-ILTAGTS 142 (633)
Q Consensus 68 ~t~~~~v~~l~~H~~~VtsLafSP---dg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~-~LatGs~ 142 (633)
.+... .. ...+...+.+++|++ ++.++++++.|+.|++||+++++.+..+ .|...|.+++|+|++. +|++|+.
T Consensus 130 ~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~ 207 (408)
T 4a11_B 130 NTLQT-AD-VFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASA 207 (408)
T ss_dssp TTTEE-EE-EEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEET
T ss_pred CCCcc-ce-eccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcC
Confidence 98773 33 334788999999998 4559999999999999999998887777 5899999999999998 5889999
Q ss_pred CCeEEEEECCCCCCceEEEee-------------cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 143 NGRVVFYDIRGKPQPLTVLRA-------------CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 143 DGsV~IWDlrs~~k~v~~l~~-------------~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
||.|++||++....++..+.. ..|...|.+++|+|++++ +++++.|+.|++||++
T Consensus 208 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~------------l~~~~~dg~i~vwd~~ 275 (408)
T 4a11_B 208 DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLH------------LLTVGTDNRMRLWNSS 275 (408)
T ss_dssp TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSE------------EEEEETTSCEEEEETT
T ss_pred CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCE------------EEEecCCCeEEEEECC
Confidence 999999999987655554421 368899999999996554 4555779999999997
Q ss_pred CCCC
Q 006743 210 PSVT 213 (633)
Q Consensus 210 ~~~~ 213 (633)
....
T Consensus 276 ~~~~ 279 (408)
T 4a11_B 276 NGEN 279 (408)
T ss_dssp TCCB
T ss_pred CCcc
Confidence 6443
No 73
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.1e-23 Score=216.48 Aligned_cols=191 Identities=8% Similarity=0.008 Sum_probs=154.8
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC---------CCCc
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT---------GRSP 72 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~---------t~~~ 72 (633)
+.+++++|++|+.||.|++||+.+++.+..+. ...|.++.|+|. +++++.|++|++|+.. +...
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 34578899999999999999999999888776 244566778876 8999999999999765 3332
Q ss_pred eeEEeccCCCCeEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEecCCCEEEEEEcCCeEEE
Q 006743 73 KVSWLKQHSAPTAGISFSS--DDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (633)
Q Consensus 73 ~v~~l~~H~~~VtsLafSP--dg~~LaSgS~DGtVrIWDlrtgk~v~~i--~h~~~ItsLafSPdG~~LatGs~DGsV~I 148 (633)
.......|...|.+++|+| ++++|++++.|+.|++||+++++.+... .+...|.+++|+|++.+|++|+.||.|+|
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 2233346778999999999 9999999999999999999999887655 35667999999999999999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 149 WDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
||+++.......+.. +|.+.|++++|+|++.+| ++++ |+.|++||++....
T Consensus 197 wd~~~~~~~~~~~~~-~h~~~v~~l~fs~~g~~l------------~s~~-~~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 197 YNLSSPDQASSRFPV-DEEAKIKEVKFADNGYWM------------VVEC-DQTVVCFDLRKDVG 247 (343)
T ss_dssp EESSCTTSCCEECCC-CTTSCEEEEEECTTSSEE------------EEEE-SSBEEEEETTSSTT
T ss_pred EECCCCCCCccEEec-cCCCCEEEEEEeCCCCEE------------EEEe-CCeEEEEEcCCCCc
Confidence 999998654345542 399999999999965554 4446 55999999987554
No 74
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.91 E-value=3.6e-23 Score=248.88 Aligned_cols=151 Identities=18% Similarity=0.318 Sum_probs=139.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.||.|+|||+.+++. +..+.+|
T Consensus 622 ~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~-h~~~v~~~~~s~~~~-~l~s~~~d~~v~vwd~~~~~~-~~~~~~~ 698 (1249)
T 3sfz_A 622 CFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA-HEDEVLCCAFSSDDS-YIATCSADKKVKIWDSATGKL-VHTYDEH 698 (1249)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCE-EEEEECC
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCCEEEEecc-CCCCEEEEEEecCCC-EEEEEeCCCeEEEEECCCCce-EEEEcCC
Confidence 5899999999999999999999999999999986 677889999999998 899999999999999998874 6778899
Q ss_pred CCCeEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 006743 81 SAPTAGISFSS--DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (633)
Q Consensus 81 ~~~VtsLafSP--dg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~ 154 (633)
...|.+++|+| ++.++++|+.|+.|++||+++++++..+ .|...|.+++|+|++.+|++++.||.|++||+++.
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence 99999999999 6678999999999999999999988776 68999999999999999999999999999999865
No 75
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.2e-22 Score=209.52 Aligned_cols=193 Identities=20% Similarity=0.310 Sum_probs=158.0
Q ss_pred CccCCCC-EEEEEECCCcEEEEEC----CCCc------eeEEEeC----C-----CCCcEEEEEEccCCCeEEEEEeCCC
Q 006743 1 MYNCKDE-HLASISLSGDLILHNL----ASGA------KAAELKD----P-----NEQVLRVLDYSRNSRHLLVTAGDDG 60 (633)
Q Consensus 1 AFSpdG~-~LaSgs~DG~I~IWDl----~tgk------~v~~~~~----~-----~~~~VssLafSpdg~~lLaSGs~DG 60 (633)
+|+|+|+ +|++|+.||.|++||+ .+++ ....+.. + |...|.+++|+|+++ +|++|+.||
T Consensus 52 ~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg 130 (425)
T 1r5m_A 52 TWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN-SIVTGVENG 130 (425)
T ss_dssp EECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS-EEEEEETTS
T ss_pred EECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC-EEEEEeCCC
Confidence 4899999 9999999999999999 8887 4444442 1 566899999999987 899999999
Q ss_pred eEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe---------------------
Q 006743 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--------------------- 119 (633)
Q Consensus 61 tI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i--------------------- 119 (633)
.|++||... . .+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+
T Consensus 131 ~i~i~~~~~-~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (425)
T 1r5m_A 131 ELRLWNKTG-A-LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSL 208 (425)
T ss_dssp CEEEEETTS-C-EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCC
T ss_pred eEEEEeCCC-C-eeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcce
Confidence 999999443 3 36778899999999999999999999999999999999876543321
Q ss_pred ------------------------------------eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEee
Q 006743 120 ------------------------------------TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRA 163 (633)
Q Consensus 120 ------------------------------------~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~ 163 (633)
.|...|.+++|+|++++|++++.||.|++||+++.. .+..+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~- 286 (425)
T 1r5m_A 209 GVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN-SQNCFY- 286 (425)
T ss_dssp BSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS-CSEEEC-
T ss_pred eeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc-cceEec-
Confidence 356789999999999999999999999999999863 445554
Q ss_pred cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 164 CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 164 ~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
.|...|.+++|+|++ ++++++.|+.|++||++...
T Consensus 287 -~~~~~i~~~~~~~~~-------------~l~~~~~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 287 -GHSQSIVSASWVGDD-------------KVISCSMDGSVRLWSLKQNT 321 (425)
T ss_dssp -CCSSCEEEEEEETTT-------------EEEEEETTSEEEEEETTTTE
T ss_pred -CCCccEEEEEECCCC-------------EEEEEeCCCcEEEEECCCCc
Confidence 689999999999953 55666789999999997543
No 76
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.91 E-value=2.1e-22 Score=213.56 Aligned_cols=192 Identities=15% Similarity=0.263 Sum_probs=162.8
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCC
Q 006743 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSA 82 (633)
Q Consensus 3 SpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~ 82 (633)
+.+++.+++++.||.|++||+.+++....+...+...|.+++|+|++. +|++|+.||.|++||+.+.+. +..+..|..
T Consensus 100 ~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~ 177 (401)
T 4aez_A 100 DWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGS-FLSVGLGNGLVDIYDVESQTK-LRTMAGHQA 177 (401)
T ss_dssp EECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCE-EEEECCCSS
T ss_pred eecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCC-EEEEECCCCeEEEEECcCCeE-EEEecCCCC
Confidence 345667888999999999999999998888877788899999999987 899999999999999988774 677889999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 006743 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGS-RRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (633)
Q Consensus 83 ~VtsLafSPdg~~LaSgS~DGtVrIWDlrt-gk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~ 160 (633)
.|.+++|+ +++|++++.|+.|++||++. ...+..+ .|...|.+++|+|++.+|++|+.||.|++||+++. .+...
T Consensus 178 ~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~ 254 (401)
T 4aez_A 178 RVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS-IPKFT 254 (401)
T ss_dssp CEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS-SEEEE
T ss_pred ceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC-CccEE
Confidence 99999995 68999999999999999994 4444444 68999999999999999999999999999999986 33444
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEee--CCCeEEccCCCCCC
Q 006743 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGA--VGDSILMPDPLPSV 212 (633)
Q Consensus 161 l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs--~Dg~IkIWDlr~~~ 212 (633)
+. .|...|.+++|+|++..+ +++++ .|+.|++||++...
T Consensus 255 ~~--~~~~~v~~~~~~p~~~~l-----------l~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 255 KT--NHNAAVKAVAWCPWQSNL-----------LATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp EC--CCSSCCCEEEECTTSTTE-----------EEEECCTTTCEEEEEETTTCC
T ss_pred ec--CCcceEEEEEECCCCCCE-----------EEEecCCCCCEEEEEECCCCC
Confidence 43 799999999999975433 33333 69999999996543
No 77
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.4e-22 Score=209.19 Aligned_cols=191 Identities=14% Similarity=0.232 Sum_probs=163.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-------
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK------- 73 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~------- 73 (633)
+|+|++++|++|+.||.|++|| .+++.+..+.. |...|.+++|+|+++ +|++++.||.|++||+.+.+..
T Consensus 115 ~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 191 (425)
T 1r5m_A 115 AWSHDGNSIVTGVENGELRLWN-KTGALLNVLNF-HRAPIVSVKWNKDGT-HIISMDVENVTILWNVISGTVMQHFELKE 191 (425)
T ss_dssp EECTTSSEEEEEETTSCEEEEE-TTSCEEEEECC-CCSCEEEEEECTTSS-EEEEEETTCCEEEEETTTTEEEEEECCC-
T ss_pred EEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccC-CCccEEEEEECCCCC-EEEEEecCCeEEEEECCCCcEEEEeeccc
Confidence 4899999999999999999999 67788888875 677889999999998 8999999999999999654321
Q ss_pred ------------------------------------------------eEEeccCCCCeEEEEEcCCCCEEEEEeCCCeE
Q 006743 74 ------------------------------------------------VSWLKQHSAPTAGISFSSDDKIIASVGLDKKL 105 (633)
Q Consensus 74 ------------------------------------------------v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtV 105 (633)
+..+..|...|.+++|+|++++|++++.|+.|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 271 (425)
T 1r5m_A 192 TGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTL 271 (425)
T ss_dssp --------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred cCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 12345788899999999999999999999999
Q ss_pred EEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEE
Q 006743 106 YTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFID 184 (633)
Q Consensus 106 rIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las 184 (633)
++||+++++.+..+ .|...|.+++|+|++ +|++++.||.|++||+++. +.+..+. .|...|.+++|+|++++
T Consensus 272 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~-~~~~~~~--~~~~~i~~~~~s~~~~~--- 344 (425)
T 1r5m_A 272 RIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN-TLLALSI--VDGVPIFAGRISQDGQK--- 344 (425)
T ss_dssp EEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT-EEEEEEE--CTTCCEEEEEECTTSSE---
T ss_pred EEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC-cEeEecc--cCCccEEEEEEcCCCCE---
Confidence 99999998887777 588999999999999 9999999999999999887 3444444 78899999999996554
Q ss_pred eccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 185 ETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 185 ~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+++++.|+.|++||+..
T Consensus 345 ---------l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 345 ---------YAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp ---------EEEEETTSCEEEEECHH
T ss_pred ---------EEEEECCCeEEEEECCC
Confidence 45557799999999854
No 78
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.91 E-value=6.7e-22 Score=198.97 Aligned_cols=193 Identities=16% Similarity=0.203 Sum_probs=157.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++|+.||.|++||+++++.+..+.+ |...+.++. +++. ++++++.++.+++|+.......+..+.+|
T Consensus 74 ~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~-h~~~~~~~~--~~~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (318)
T 4ggc_A 74 AWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS-HSARVGSLS--WNSY-ILSSGSRSGHIHHHDVRVAEHHVATLSGH 149 (318)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEE--EETT-EEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EECCCCCEEEEEECCCcEEEeecCCceeEEEecC-ccceEEEee--cCCC-EEEEEecCCceEeeecCCCceeEEEEcCc
Confidence 4899999999999999999999999999999987 445555444 4455 89999999999999998887778888999
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee-------------------------------------------
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSS------------------------------------------- 117 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~------------------------------------------- 117 (633)
...+.++.|.+++++|++++.|+.|++||+++++...
T Consensus 150 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~ 229 (318)
T 4ggc_A 150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 229 (318)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT
T ss_pred cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc
Confidence 9999999999999999999999999999987643110
Q ss_pred ------EeeCCCCeEEEEEecCCCEEEEEE--cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCC
Q 006743 118 ------CITYEAPFSSLAFIDDDWILTAGT--SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCK 189 (633)
Q Consensus 118 ------~i~h~~~ItsLafSPdG~~LatGs--~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~s 189 (633)
...+...+..++|+|++..+++++ .|+.|+|||+++. +++..+. +|.+.|++++|+|++++
T Consensus 230 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~-~~~~~l~--gH~~~V~~l~~spdg~~-------- 298 (318)
T 4ggc_A 230 SGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELK--GHTSRVLSLTMSPDGAT-------- 298 (318)
T ss_dssp TCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEEC--CCSSCEEEEEECTTSSC--------
T ss_pred cccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC-cEEEEEc--CCCCCEEEEEEcCCCCE--------
Confidence 001234566788888888887665 7899999999987 4555555 89999999999996555
Q ss_pred CCeEEEEeeCCCeEEccCCCCCC
Q 006743 190 AETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 190 d~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
|++++.|+.|+|||+....
T Consensus 299 ----l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 299 ----VASAAADETLRLWRCFELD 317 (318)
T ss_dssp ----EEEEETTTEEEEECCSCCC
T ss_pred ----EEEEecCCeEEEEECCCCC
Confidence 4555789999999996543
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.91 E-value=5e-23 Score=214.63 Aligned_cols=196 Identities=17% Similarity=0.159 Sum_probs=162.3
Q ss_pred CccCC----C---CEEEEEECCCcEEEEECCCCce-----eEEEeCCC----CCcEEEEEEc----cCCCeE-EEEEeCC
Q 006743 1 MYNCK----D---EHLASISLSGDLILHNLASGAK-----AAELKDPN----EQVLRVLDYS----RNSRHL-LVTAGDD 59 (633)
Q Consensus 1 AFSpd----G---~~LaSgs~DG~I~IWDl~tgk~-----v~~~~~~~----~~~VssLafS----pdg~~l-LaSGs~D 59 (633)
+|+++ | ++|++++.||.|++||+.+++. +..+..+. ...|.+++|+ |++. + |++++.|
T Consensus 69 ~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~l~~~~~d 147 (397)
T 1sq9_A 69 DVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS-HRLVATDVK 147 (397)
T ss_dssp EEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----C-EEEEEEETT
T ss_pred EEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCc-eEEEEEeCC
Confidence 36777 8 9999999999999999988886 77777643 5789999999 9988 7 9999999
Q ss_pred CeEEEEECCC------CCcee----EEe-------ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee--
Q 006743 60 GTLHLWDTTG------RSPKV----SWL-------KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-- 120 (633)
Q Consensus 60 GtI~IWDl~t------~~~~v----~~l-------~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~-- 120 (633)
|.|++||+.. ..... ..+ ..|...|.+++|+|++ +|++++.|+.|++||+++++.+..+.
T Consensus 148 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 226 (397)
T 1sq9_A 148 GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQ 226 (397)
T ss_dssp SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecc
Confidence 9999999987 44321 144 4588999999999999 99999999999999999998887774
Q ss_pred --C---CCCeEEEEEecCCCEEEEEEcC---CeEEEEECCCCCCceEEEeecC-------------CCCCeeEEEEccCC
Q 006743 121 --Y---EAPFSSLAFIDDDWILTAGTSN---GRVVFYDIRGKPQPLTVLRACS-------------SSEAVSSLCWQRAK 179 (633)
Q Consensus 121 --h---~~~ItsLafSPdG~~LatGs~D---GsV~IWDlrs~~k~v~~l~~~~-------------H~~~VtsLafsPdg 179 (633)
| ...|.+++|+|++.+|++++.| |.|++||+++. +++..+. . |...|.+++|+|++
T Consensus 227 ~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG-ERIGSLS--VPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC-CEEEEEC--BC--------CCBSBSSCEEEEEECSSS
T ss_pred ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC-cccceec--cCcccccccccccccCCcEEEEEECCCC
Confidence 5 8999999999999999999999 99999999987 4445554 4 89999999999965
Q ss_pred CeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 180 PVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 180 ~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
++ |++++.|+.|++||++....
T Consensus 304 ~~------------l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 304 ET------------LCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp SE------------EEEEETTSEEEEEETTTTEE
T ss_pred CE------------EEEEeCCCeEEEEEcCCCce
Confidence 44 55557799999999976544
No 80
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.91 E-value=2.6e-22 Score=208.26 Aligned_cols=199 Identities=16% Similarity=0.139 Sum_probs=160.7
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCC--eEEEEEeCCCeEEEEECCCCCceeEEe
Q 006743 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSR--HLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (633)
Q Consensus 1 AFSp-dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~--~lLaSGs~DGtI~IWDl~t~~~~v~~l 77 (633)
+|+| ++++|++++.||.|++||+.+++.+..+. +...+.++.|.+.+. .++++++.||.|++||+.+... +..+
T Consensus 106 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-~~~~ 182 (408)
T 4a11_B 106 QWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC-SHIL 182 (408)
T ss_dssp EECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC-CEEE
T ss_pred EEccCCCcEEEEEeCCCeEEEeeCCCCccceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce-eeee
Confidence 3778 77899999999999999999998888887 456778899988542 2899999999999999988774 5678
Q ss_pred ccCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCc-eeeE----------------eeCCCCeEEEEEecCCCEEEE
Q 006743 78 KQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGSRR-PSSC----------------ITYEAPFSSLAFIDDDWILTA 139 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg~-~LaSgS~DGtVrIWDlrtgk-~v~~----------------i~h~~~ItsLafSPdG~~Lat 139 (633)
..|...|.+++|+|++. +|++++.||.|++||++++. .+.. ..|...|.+++|+|++.+|++
T Consensus 183 ~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 262 (408)
T 4a11_B 183 QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLT 262 (408)
T ss_dssp CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEE
T ss_pred cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEE
Confidence 89999999999999888 69999999999999998765 2222 247788999999999999999
Q ss_pred EEcCCeEEEEECCCCCCce--------------------------------------------EEEeecCCCCCeeEEEE
Q 006743 140 GTSNGRVVFYDIRGKPQPL--------------------------------------------TVLRACSSSEAVSSLCW 175 (633)
Q Consensus 140 Gs~DGsV~IWDlrs~~k~v--------------------------------------------~~l~~~~H~~~VtsLaf 175 (633)
++.||.|++||+++..... ......+|...|++++|
T Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 342 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVF 342 (408)
T ss_dssp EETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred ecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEE
Confidence 9999999999998753210 11122368999999999
Q ss_pred ccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCCC
Q 006743 176 QRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (633)
Q Consensus 176 sPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~~ 214 (633)
+|++++ |++++.|+.|++||+....+.
T Consensus 343 s~~~~~------------l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 343 QSNFQE------------LYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp ETTTTE------------EEEEETTSCEEEEEECC----
T ss_pred cCCCCE------------EEEECCCCeEEEEeCCCCCcc
Confidence 996544 555678999999999876553
No 81
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.90 E-value=2.3e-22 Score=216.07 Aligned_cols=197 Identities=16% Similarity=0.231 Sum_probs=160.9
Q ss_pred CccCCCC-EEEEEECCCcEEEEECCCCce-------eEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC-
Q 006743 1 MYNCKDE-HLASISLSGDLILHNLASGAK-------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS- 71 (633)
Q Consensus 1 AFSpdG~-~LaSgs~DG~I~IWDl~tgk~-------v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~- 71 (633)
+|+|++. +|++|+.||.|++||+..+.. ...+. .|...|.+++|+|++..+|++++.||.|++||++...
T Consensus 188 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 188 SWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFT-GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT 266 (430)
T ss_dssp EECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEEC-CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred EeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeec-CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence 4889988 999999999999999987432 33444 4677899999999666699999999999999998762
Q ss_pred -ceeEEeccCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEeCCC-CceeeEe-eCCCCeEEEEEecCCC-EEEEEEcCCeE
Q 006743 72 -PKVSWLKQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGS-RRPSSCI-TYEAPFSSLAFIDDDW-ILTAGTSNGRV 146 (633)
Q Consensus 72 -~~v~~l~~H~~~VtsLafSPdg~-~LaSgS~DGtVrIWDlrt-gk~v~~i-~h~~~ItsLafSPdG~-~LatGs~DGsV 146 (633)
..+..+..|...|++++|+|++. +|++|+.||.|++||+++ ..++..+ .|...|.+++|+|++. +|++++.||.|
T Consensus 267 ~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i 346 (430)
T 2xyi_A 267 SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 346 (430)
T ss_dssp SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCC
T ss_pred CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcE
Confidence 33566779999999999999776 799999999999999998 4555555 5899999999999984 78999999999
Q ss_pred EEEECCCCCC-----------ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 147 VFYDIRGKPQ-----------PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 147 ~IWDlrs~~k-----------~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
+|||++.... +.......+|...|++++|+|+++ .++++++.|+.|++|++.
T Consensus 347 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-----------~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 347 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-----------WIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSST-----------TEEEEEETTSEEEEEEEC
T ss_pred EEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCC-----------CEEEEEECCCCEEEeEcc
Confidence 9999987321 123334448999999999999654 245666789999999985
No 82
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.90 E-value=1e-22 Score=215.22 Aligned_cols=195 Identities=13% Similarity=0.183 Sum_probs=156.5
Q ss_pred ccCCCCEE-EEEECCCcEEEEECCCCc----eeEEEeCCCCCcEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCC----
Q 006743 2 YNCKDEHL-ASISLSGDLILHNLASGA----KAAELKDPNEQVLRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRS---- 71 (633)
Q Consensus 2 FSpdG~~L-aSgs~DG~I~IWDl~tgk----~v~~~~~~~~~~VssLafSp-dg~~lLaSGs~DGtI~IWDl~t~~---- 71 (633)
++++...+ ++++.||.|+||++.... .+..+.+ |...|.+++|+| ++. +|++|+.||.|+|||+.+..
T Consensus 42 ~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~-~l~s~s~dg~v~vw~~~~~~~~~~ 119 (402)
T 2aq5_A 42 VNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCG-HTAPVLDIAWCPHNDN-VIASGSEDCTVMVWEIPDGGLVLP 119 (402)
T ss_dssp ECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCC-CSSCEEEEEECTTCTT-EEEEEETTSEEEEEECCTTCCSSC
T ss_pred ECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEec-CCCCEEEEEeCCCCCC-EEEEEeCCCeEEEEEccCCCCccc
Confidence 34444333 347889999999986542 2333444 778899999999 665 99999999999999998763
Q ss_pred --ceeEEeccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeEe---eCCCCeEEEEEecCCCEEEEEEcCCe
Q 006743 72 --PKVSWLKQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCI---TYEAPFSSLAFIDDDWILTAGTSNGR 145 (633)
Q Consensus 72 --~~v~~l~~H~~~VtsLafSPdg-~~LaSgS~DGtVrIWDlrtgk~v~~i---~h~~~ItsLafSPdG~~LatGs~DGs 145 (633)
..+..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++.+|++++.||.
T Consensus 120 ~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 199 (402)
T 2aq5_A 120 LREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKR 199 (402)
T ss_dssp BCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSE
T ss_pred cCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCc
Confidence 2356788999999999999987 79999999999999999999988777 38899999999999999999999999
Q ss_pred EEEEECCCCCCceEEEeecCCCCC-eeEEEEccCCCeEEEeccCCCCeEEEEe---eCCCeEEccCCCCCC
Q 006743 146 VVFYDIRGKPQPLTVLRACSSSEA-VSSLCWQRAKPVFIDETTCKAETALLGG---AVGDSILMPDPLPSV 212 (633)
Q Consensus 146 V~IWDlrs~~k~v~~l~~~~H~~~-VtsLafsPdg~~Las~s~~sd~~lLlSg---s~Dg~IkIWDlr~~~ 212 (633)
|++||+++.. .+..+. ..|.+. +.+++|+|++++ ++++ +.|+.|++||++...
T Consensus 200 i~iwd~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~------------l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 200 VRVIEPRKGT-VVAEKD-RPHEGTRPVHAVFVSEGKI------------LTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EEEEETTTTE-EEEEEE-CSSCSSSCCEEEECSTTEE------------EEEEECTTCCEEEEEEETTBCS
T ss_pred EEEEeCCCCc-eeeeec-cCCCCCcceEEEEcCCCcE------------EEEeccCCCCceEEEEcCcccc
Confidence 9999999873 333331 267665 899999996544 4444 569999999997543
No 83
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.90 E-value=2.5e-23 Score=223.66 Aligned_cols=207 Identities=14% Similarity=0.176 Sum_probs=162.6
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEEeCCC--CCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006743 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELKDPN--EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (633)
Q Consensus 1 AFSp-dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~--~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l 77 (633)
+|+| ++++|++|+.||+|+|||++++.. ..+..++ ...+.+++|++++. +|++|+.||.|++||+++.. +..+
T Consensus 171 ~f~p~~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~~~--~~~~ 246 (435)
T 4e54_B 171 KFNPLNTNQFYASSMEGTTRLQDFKGNIL-RVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDGKE--LWNL 246 (435)
T ss_dssp EECSSCTTEEEEECSSSCEEEEETTSCEE-EEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSSCB--CCCS
T ss_pred EEeCCCCCEEEEEeCCCEEEEeeccCCce-eEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCcce--eEEE
Confidence 4887 689999999999999999976543 3333333 34567799999998 89999999999999998655 5678
Q ss_pred ccCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeE----eeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECC
Q 006743 78 KQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGSRRPSSC----ITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIR 152 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg~-~LaSgS~DGtVrIWDlrtgk~v~~----i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlr 152 (633)
..|...|++++|+|++. +|++++.|+.|++||+++.+.... ..|...|.+++|+|+|.+|++++.||.|+|||++
T Consensus 247 ~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 247 RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred ecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECC
Confidence 89999999999999665 788999999999999998654432 3688999999999999999999999999999999
Q ss_pred CCCCceEEEeec---CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 153 GKPQPLTVLRAC---SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 153 s~~k~v~~l~~~---~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
+...+....... .....+....|+|++.+++++...++..+++++..++.|++||+...
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g 388 (435)
T 4e54_B 327 QWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSG 388 (435)
T ss_dssp SSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSC
T ss_pred CCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCC
Confidence 875443322210 11123456789999999888755555666666666788999998543
No 84
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.90 E-value=9.6e-23 Score=216.81 Aligned_cols=199 Identities=13% Similarity=0.170 Sum_probs=161.7
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCC---Cc---eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC---CC
Q 006743 1 MYNC-KDEHLASISLSGDLILHNLAS---GA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT---GR 70 (633)
Q Consensus 1 AFSp-dG~~LaSgs~DG~I~IWDl~t---gk---~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~---t~ 70 (633)
+|+| ++++|++|+.||.|+|||+.+ +. ....+ .|...|.+++|+|++. +|++|+.||.|++||+. .+
T Consensus 70 ~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~-~l~s~s~dg~i~vwd~~~~~~~ 146 (437)
T 3gre_A 70 AVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY--DCSSTVTQITMIPNFD-AFAVSSKDGQIIVLKVNHYQQE 146 (437)
T ss_dssp EEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE--ECSSCEEEEEECTTSS-EEEEEETTSEEEEEEEEEEEET
T ss_pred EECCCCCCEEEEecCCceEEEeECcccccCcccceeeec--cCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEEeccccCC
Confidence 4889 999999999999999999876 43 23333 3778899999999887 89999999999999994 33
Q ss_pred CceeEEec----------c--CCCCeEEEE--EcCCCCEEEEEeCCCeEEEEeCCCCceeeEee---CCCCeEEEEEecC
Q 006743 71 SPKVSWLK----------Q--HSAPTAGIS--FSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT---YEAPFSSLAFIDD 133 (633)
Q Consensus 71 ~~~v~~l~----------~--H~~~VtsLa--fSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~---h~~~ItsLafSPd 133 (633)
+. ..... . +...+.++. +++++.+|++++.|+.|++||+++++++..+. |...|.+++|+|+
T Consensus 147 ~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~ 225 (437)
T 3gre_A 147 SE-VKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEE 225 (437)
T ss_dssp TE-EEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTT
T ss_pred ce-eeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCC
Confidence 31 11111 2 567778877 56789999999999999999999999887774 7899999999999
Q ss_pred CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 134 DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 134 G~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
+.+|++|+.||.|++||+++. +++..+. ..|...|.+++|+|. ...++.++++++.|+.|++||++....
T Consensus 226 ~~~l~s~~~dg~i~iwd~~~~-~~~~~~~-~~~~~~v~~~~~~~~--------~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 226 CCVLILGTTRGIIDIWDIRFN-VLIRSWS-FGDHAPITHVEVCQF--------YGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp SCEEEEEETTSCEEEEETTTT-EEEEEEB-CTTCEEEEEEEECTT--------TCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred CCEEEEEcCCCeEEEEEcCCc-cEEEEEe-cCCCCceEEEEeccc--------cCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 999999999999999999986 3444433 267789999999874 345677888999999999999975443
No 85
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.90 E-value=5.5e-23 Score=218.64 Aligned_cols=192 Identities=10% Similarity=0.145 Sum_probs=159.6
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCC-CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-c
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDP-NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-Q 79 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~-~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~-~ 79 (633)
+++++++|++|+.||.|++||+.+++.+..+..+ |...|.+++|+|++. +|++|+.||.|++||++.... +..+. .
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~~~ 255 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFNVL-IRSWSFG 255 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEE-EEEEBCT
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCccE-EEEEecC
Confidence 4578999999999999999999999999999875 667899999999987 899999999999999998764 44444 7
Q ss_pred CCCCeEEEEEcC----CCCEEEEEeCCCeEEEEeCCCCceeeEee---------------------------CCCCeEEE
Q 006743 80 HSAPTAGISFSS----DDKIIASVGLDKKLYTYDPGSRRPSSCIT---------------------------YEAPFSSL 128 (633)
Q Consensus 80 H~~~VtsLafSP----dg~~LaSgS~DGtVrIWDlrtgk~v~~i~---------------------------h~~~ItsL 128 (633)
|...|.+++|+| ++.+|++++.|+.|++||+++++++..+. |...|.++
T Consensus 256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l 335 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI 335 (437)
T ss_dssp TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE
T ss_pred CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE
Confidence 888999997765 67799999999999999999988766553 45568899
Q ss_pred EEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeec-----------------------------------CCCCCeeEE
Q 006743 129 AFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRAC-----------------------------------SSSEAVSSL 173 (633)
Q Consensus 129 afSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~-----------------------------------~H~~~VtsL 173 (633)
+|+ ++.+|++|+.||.|++||+++.+. ...+... .|...|+++
T Consensus 336 ~~~-~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i 413 (437)
T 3gre_A 336 SVS-NDKILLTDEATSSIVMFSLNELSS-SKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSI 413 (437)
T ss_dssp EEE-TTEEEEEEGGGTEEEEEETTCGGG-CEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEE
T ss_pred EEC-CceEEEecCCCCeEEEEECCCccc-ceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeE
Confidence 999 779999999999999999998743 3333311 288889999
Q ss_pred EEccCCCeEEEeccCCCCeEEEEeeCCCeEEccC
Q 006743 174 CWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (633)
Q Consensus 174 afsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWD 207 (633)
+|.++ .++.++++++.||.|+||.
T Consensus 414 ~~~~~----------~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 414 STCEV----------DETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEES----------SSSEEEEEEETTSCEEEEC
T ss_pred eeecc----------CCceEEEEEcCCceEEEeC
Confidence 98873 2467888889999999995
No 86
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=6.5e-23 Score=217.17 Aligned_cols=194 Identities=11% Similarity=0.172 Sum_probs=153.7
Q ss_pred CccCCC--CEEEEEECCCcEEEEECCCCcee---------------------------------------EEEeCCCCCc
Q 006743 1 MYNCKD--EHLASISLSGDLILHNLASGAKA---------------------------------------AELKDPNEQV 39 (633)
Q Consensus 1 AFSpdG--~~LaSgs~DG~I~IWDl~tgk~v---------------------------------------~~~~~~~~~~ 39 (633)
+|+|++ .+|++++.||.|++||+.+++.. ..+...|...
T Consensus 100 ~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 100 RWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp EECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred EEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 478888 79999999999999998764331 1333457788
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE-------EeccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEeCC
Q 006743 40 LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS-------WLKQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPG 111 (633)
Q Consensus 40 VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~-------~l~~H~~~VtsLafSPdg-~~LaSgS~DGtVrIWDlr 111 (633)
|.+++|+|+++ +|++| .|+.|+|||+........ .+..|...|++++|+|++ ++|++|+.|+.|++||++
T Consensus 180 v~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 180 INSISINSDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp CCEEEECTTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred eEEEEEcCCCC-EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 89999999988 78888 899999999984432233 256899999999999988 999999999999999999
Q ss_pred CCce----eeEe-eCCC------------CeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCC-----
Q 006743 112 SRRP----SSCI-TYEA------------PFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEA----- 169 (633)
Q Consensus 112 tgk~----v~~i-~h~~------------~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~----- 169 (633)
+++. +..+ .+.. .|.+++|+|++++|++++. +.|+|||+++..+++..+. +|...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~--~~~~~~~~l~ 334 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ--VHEYLRSKLC 334 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE--SCGGGTTTHH
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee--cccccccccc
Confidence 9876 4555 3444 8999999999999999999 9999999997445666665 45432
Q ss_pred ----------eeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 170 ----------VSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 170 ----------VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
+..++|+|++++ |++++.|+.|++||+...
T Consensus 335 ~~~~~~~i~~~~~~~~s~~~~~------------l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 335 SLYENDCIFDKFECCWNGSDSV------------VMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp HHHHTSGGGCCCCEEECTTSSE------------EEEECSTTEEEEEETTTC
T ss_pred ccccccccccceEEEECCCCCE------------EEEeccCCEEEEEEcCCC
Confidence 334899996544 455678999999999754
No 87
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.90 E-value=6.9e-22 Score=200.78 Aligned_cols=195 Identities=15% Similarity=0.169 Sum_probs=161.9
Q ss_pred CccCC-CCEEEEEECCCcEEEEECCCCc-----eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 006743 1 MYNCK-DEHLASISLSGDLILHNLASGA-----KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (633)
Q Consensus 1 AFSpd-G~~LaSgs~DG~I~IWDl~tgk-----~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v 74 (633)
+|+|+ +++|++|+.||.|+|||+.+.+ ....+.+ |...|.+++|+|+++ +|++|+.|+.|++|+...... .
T Consensus 45 ~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-h~~~V~~~~~s~dg~-~l~s~~~d~~i~~~~~~~~~~-~ 121 (340)
T 4aow_A 45 ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG-HSHFVSDVVISSDGQ-FALSGSWDGTLRLWDLTTGTT-T 121 (340)
T ss_dssp EECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-E
T ss_pred EEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeC-CCCCEEEEEECCCCC-EEEEEcccccceEEeecccce-e
Confidence 58887 6899999999999999997654 3445554 678899999999998 899999999999999988774 4
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEecCC--CEEEEEEcCCeEEEEE
Q 006743 75 SWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDD--WILTAGTSNGRVVFYD 150 (633)
Q Consensus 75 ~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i--~h~~~ItsLafSPdG--~~LatGs~DGsV~IWD 150 (633)
.....+...+..+.+++++++|++++.|+.+++||+......... .|...+.+++|++++ .++++++.|+.|++||
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d 201 (340)
T 4aow_A 122 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201 (340)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEE
Confidence 556678889999999999999999999999999999876554433 578899999999864 6788999999999999
Q ss_pred CCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 151 IRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 151 lrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
+++. +....+. +|.+.|++++|+|+++ ++++++.|+.|++||++....
T Consensus 202 ~~~~-~~~~~~~--~h~~~v~~~~~s~~~~------------~l~s~s~Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 202 LANC-KLKTNHI--GHTGYLNTVTVSPDGS------------LCASGGKDGQAMLWDLNEGKH 249 (340)
T ss_dssp TTTT-EEEEEEC--CCSSCEEEEEECTTSS------------EEEEEETTCEEEEEETTTTEE
T ss_pred CCCC-ceeeEec--CCCCcEEEEEECCCCC------------EEEEEeCCCeEEEEEeccCce
Confidence 9987 3344444 7999999999999654 455567899999999975443
No 88
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.8e-22 Score=208.10 Aligned_cols=191 Identities=14% Similarity=0.108 Sum_probs=147.5
Q ss_pred ccCCCCEEEEEECCCcEEEEECC---------CCceeEEEeCCCCCcEEEEEEcc--CCCeEEEEEeCCCeEEEEECCCC
Q 006743 2 YNCKDEHLASISLSGDLILHNLA---------SGAKAAELKDPNEQVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGR 70 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~---------tgk~v~~~~~~~~~~VssLafSp--dg~~lLaSGs~DGtI~IWDl~t~ 70 (633)
|+|+ +++++.|+.|++|+.. +++.+..+...|...|.+++|+| +++ +|++|+.||.|++||+++.
T Consensus 84 ~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~ 159 (343)
T 3lrv_A 84 EHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDD 159 (343)
T ss_dssp CCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSS
T ss_pred eCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCC
Confidence 5665 8999999999999654 55556666655677899999999 887 8999999999999999988
Q ss_pred CceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee-eEe-e-CCCCeEEEEEecCCCEEEEEEcCCeEE
Q 006743 71 SPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS-SCI-T-YEAPFSSLAFIDDDWILTAGTSNGRVV 147 (633)
Q Consensus 71 ~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v-~~i-~-h~~~ItsLafSPdG~~LatGs~DGsV~ 147 (633)
+........|...|.+++|+|++.+|++|+.|+.|++||+++++.+ ..+ . |...|.+++|+|++.+|++++ |+.|+
T Consensus 160 ~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~ 238 (343)
T 3lrv_A 160 SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVV 238 (343)
T ss_dssp CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEE
T ss_pred cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEE
Confidence 7532222456668999999999999999999999999999998876 444 4 899999999999999999999 55999
Q ss_pred EEECCCCCCceEEEee-cCCCCCe--eEEEEccCCCeEEEeccCCCCeEEEEeeC-CCeEEccCCCC
Q 006743 148 FYDIRGKPQPLTVLRA-CSSSEAV--SSLCWQRAKPVFIDETTCKAETALLGGAV-GDSILMPDPLP 210 (633)
Q Consensus 148 IWDlrs~~k~v~~l~~-~~H~~~V--tsLafsPdg~~Las~s~~sd~~lLlSgs~-Dg~IkIWDlr~ 210 (633)
+||+++.... ..+.. ..|...+ .+++|+|++++|++ ++. |+.|++|++..
T Consensus 239 iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~~------------~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 239 CFDLRKDVGT-LAYPTYTIPEFKTGTVTYDIDDSGKNMIA------------YSNESNSLTIYKFDK 292 (343)
T ss_dssp EEETTSSTTC-BSSCCCBC-----CCEEEEECTTSSEEEE------------EETTTTEEEEEEECT
T ss_pred EEEcCCCCcc-eeecccccccccccceEEEECCCCCEEEE------------ecCCCCcEEEEEEcc
Confidence 9999987432 22211 1233334 36999997665544 355 88999998753
No 89
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.90 E-value=1.5e-22 Score=206.24 Aligned_cols=192 Identities=11% Similarity=0.070 Sum_probs=161.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc---eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC-CCCCceeEE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT-TGRSPKVSW 76 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk---~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl-~t~~~~v~~ 76 (633)
+|+|++++|++++.||.|+|||+.+++ ....+. .|...|.+++|+|++..+|++|+.||.|++||+ .+.. ...
T Consensus 18 ~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--~~~ 94 (342)
T 1yfq_A 18 KIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS--FQA 94 (342)
T ss_dssp EEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS--EEE
T ss_pred EEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc--eEe
Confidence 489999999999999999999998877 233344 367789999999997526899999999999999 8776 467
Q ss_pred ecc--CCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC---------CceeeEeeCCCCeEEEEEecCCCEEEEEEcCCe
Q 006743 77 LKQ--HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS---------RRPSSCITYEAPFSSLAFIDDDWILTAGTSNGR 145 (633)
Q Consensus 77 l~~--H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrt---------gk~v~~i~h~~~ItsLafSPdG~~LatGs~DGs 145 (633)
+.. |...|.+++|+| +++|++++.|+.|++||+++ ++++..+.+...|.+++|+|++ +++++.||.
T Consensus 95 ~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~ 171 (342)
T 1yfq_A 95 LTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQ 171 (342)
T ss_dssp CBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTE
T ss_pred ccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCe
Confidence 788 999999999999 99999999999999999998 7777777799999999999887 999999999
Q ss_pred EEEEECCC-CCCceEEEeecCCCCCeeEEEEcc-CCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 146 VVFYDIRG-KPQPLTVLRACSSSEAVSSLCWQR-AKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 146 V~IWDlrs-~~k~v~~l~~~~H~~~VtsLafsP-dg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
|++||+++ ........ ...|...|.+++|+| +++++ ++++.|+.|++||+...
T Consensus 172 i~i~d~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~l------------~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 172 VQWFRLPLCEDDNGTIE-ESGLKYQIRDVALLPKEQEGY------------ACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp EEEEESSCCTTCCCEEE-ECSCSSCEEEEEECSGGGCEE------------EEEETTSEEEEEECCTT
T ss_pred EEEEECCccccccceee-ecCCCCceeEEEECCCCCCEE------------EEEecCCcEEEEEEcCC
Confidence 99999998 54333332 336889999999999 76554 44467999999998654
No 90
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.89 E-value=1.6e-21 Score=208.36 Aligned_cols=195 Identities=14% Similarity=0.195 Sum_probs=159.0
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~-~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
|+++ +.||+|. |++|+|||+.+++.+..+.. .|...|++|+|+|+++ +|++|+.||.|+|||+.+++. +..+.+|
T Consensus 113 wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~-~lasgs~Dg~v~iWd~~~~~~-~~~~~~h 188 (420)
T 4gga_A 113 WSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQQKR-LRNMTSH 188 (420)
T ss_dssp ECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE-EEEECCC
T ss_pred ECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCC-EEEEEECCCeEEEEEcCCCcE-EEEEeCC
Confidence 6654 5777765 99999999999998887764 3567899999999998 899999999999999998874 6778999
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-eeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP-SSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~-v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v 158 (633)
...|.++.|+ +.+|++|+.|+.+++||.+.... +..+ .|...+..+.|+|++.++++++.|+.|++||........
T Consensus 189 ~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~ 266 (420)
T 4gga_A 189 SARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW 266 (420)
T ss_dssp SSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCS
T ss_pred CCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccc
Confidence 9999999886 78999999999999999987543 3333 689999999999999999999999999999998754321
Q ss_pred -EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 159 -TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 159 -~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
.......|...|.+++|+|.+..++. ..+++.|+.|++||++..
T Consensus 267 ~~~~~~~~~~~~V~~~~~~p~~~~~la---------~~~gs~D~~I~iwd~~t~ 311 (420)
T 4gga_A 267 VPLQTFTQHQGAVKAVAWCPWQSNVLA---------TGGGTSDRHIRIWNVCSG 311 (420)
T ss_dssp CCSEEECCCSSCEEEEEECTTCTTEEE---------EEECTTTCEEEEEETTTT
T ss_pred eeeeeecccCCceeeeeeCCCcccEEE---------EEeecCCCEEEEEeCCcc
Confidence 11223378999999999996543322 234567999999998643
No 91
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.89 E-value=1.3e-21 Score=235.42 Aligned_cols=181 Identities=19% Similarity=0.270 Sum_probs=156.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCC-CeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNS-RHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg-~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
+|+|+|++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|++++ ..++++|+.|+.|++||+.++.. +..+.+
T Consensus 664 ~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~-~~~~~~ 741 (1249)
T 3sfz_A 664 AFSSDDSYIATCSADKKVKIWDSATGKLVHTYDE-HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC-RNTMFG 741 (1249)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE-EEEECC
T ss_pred EEecCCCEEEEEeCCCeEEEEECCCCceEEEEcC-CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch-hheecC
Confidence 5899999999999999999999999999999986 66778999999953 34889999999999999998874 677889
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe----------------------------------------
Q 006743 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI---------------------------------------- 119 (633)
Q Consensus 80 H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i---------------------------------------- 119 (633)
|...|++++|+|++++|++++.||.|++||+++++....+
T Consensus 742 h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v 821 (1249)
T 3sfz_A 742 HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKV 821 (1249)
T ss_dssp CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEE
T ss_pred CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcE
Confidence 9999999999999999999999999999998765432221
Q ss_pred ----------------eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEE
Q 006743 120 ----------------TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFI 183 (633)
Q Consensus 120 ----------------~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~La 183 (633)
.|...|.+++|+|++.++++++.||.|++||+.+. ..+..+. +|...|++++|+|++++++
T Consensus 822 ~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~--~h~~~v~~v~~spdg~~l~ 898 (1249)
T 3sfz_A 822 LLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR-LKVADCR--GHLSWVHGVMFSPDGSSFL 898 (1249)
T ss_dssp EEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT-EEEEEEC--CCSSCEEEEEECTTSSEEE
T ss_pred EEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceeeecC--CCccceEEEEECCCCCEEE
Confidence 35678899999999999999999999999999986 3334444 8999999999999888777
Q ss_pred Eec
Q 006743 184 DET 186 (633)
Q Consensus 184 s~s 186 (633)
+++
T Consensus 899 s~s 901 (1249)
T 3sfz_A 899 TAS 901 (1249)
T ss_dssp EEE
T ss_pred EEe
Confidence 663
No 92
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.89 E-value=6.8e-22 Score=211.92 Aligned_cols=190 Identities=13% Similarity=0.191 Sum_probs=159.7
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~ 81 (633)
+..++++|++|+.||.|++||+.+++.+..+.+ |...|.+++|++++ +|++|+.||+|++||+.+++. +..+.+|.
T Consensus 128 ~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~-h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~-~~~~~~h~ 203 (464)
T 3v7d_B 128 LQFEDNYVITGADDKMIRVYDSINKKFLLQLSG-HDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCC-THVFEGHN 203 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTEE-EEEECCCS
T ss_pred EEECCCEEEEEcCCCcEEEEECCCCcEEEEEeC-CCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcE-EEEECCCC
Confidence 345788999999999999999999999999886 67788999999886 799999999999999998874 67788999
Q ss_pred CCeEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCcee-----------------------eE-eeCCCCeEEEEEecCCC
Q 006743 82 APTAGISFSS--DDKIIASVGLDKKLYTYDPGSRRPS-----------------------SC-ITYEAPFSSLAFIDDDW 135 (633)
Q Consensus 82 ~~VtsLafSP--dg~~LaSgS~DGtVrIWDlrtgk~v-----------------------~~-i~h~~~ItsLafSPdG~ 135 (633)
..|.+++|++ ++++|++++.|+.|++||++++... .. ..|...|.++ ++++.
T Consensus 204 ~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~ 281 (464)
T 3v7d_B 204 STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGN 281 (464)
T ss_dssp SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETT
T ss_pred CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCC
Confidence 9999999984 7899999999999999999876532 12 2466777766 67799
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 136 ~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
+|++|+.||.|++||+++. +++..+. +|...|.+++|+|++++ +++++.|+.|++||++...
T Consensus 282 ~l~~~~~d~~i~vwd~~~~-~~~~~~~--~~~~~v~~~~~~~~~~~------------l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 282 IVVSGSYDNTLIVWDVAQM-KCLYILS--GHTDRIYSTIYDHERKR------------CISASMDTTIRIWDLENGE 343 (464)
T ss_dssp EEEEEETTSCEEEEETTTT-EEEEEEC--CCSSCEEEEEEETTTTE------------EEEEETTSCEEEEETTTTE
T ss_pred EEEEEeCCCeEEEEECCCC-cEEEEec--CCCCCEEEEEEcCCCCE------------EEEEeCCCcEEEEECCCCc
Confidence 9999999999999999986 3444444 79999999999996554 4556789999999997543
No 93
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.8e-22 Score=232.07 Aligned_cols=200 Identities=12% Similarity=0.169 Sum_probs=166.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECC--CCceeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCCc-eeE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLA--SGAKAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRSP-KVS 75 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~--tgk~v~~~~~~~~~~VssLafSpd--g~~lLaSGs~DGtI~IWDl~t~~~-~v~ 75 (633)
+|+|+|++|++|+.||.|+|||+. +++.+..+.+ |...|.+++|+++ ++ +|++|+.||.|++||+.++.. .+.
T Consensus 16 ~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~~-~l~s~s~Dg~I~vwd~~~~~~~~~~ 93 (753)
T 3jro_A 16 VLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWKEENGRWSQIA 93 (753)
T ss_dssp CCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECC-CSSCEEEEEECCTTSCS-EEEEEETTSCEEEEEEETTEEEEEE
T ss_pred EECCCCCeEEEEECCCcEEEEecCCCCCccceeccC-CcCceEEEEecCCCCCC-EEEEEeCCCeEEEEECCCCcccccc
Confidence 589999999999999999999997 4456666765 6778999999987 66 899999999999999987651 356
Q ss_pred EeccCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCce---eeEeeCCCCeEEEEEec-------------CCCEE
Q 006743 76 WLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRP---SSCITYEAPFSSLAFID-------------DDWIL 137 (633)
Q Consensus 76 ~l~~H~~~VtsLafSPd--g~~LaSgS~DGtVrIWDlrtgk~---v~~i~h~~~ItsLafSP-------------dG~~L 137 (633)
.+..|...|++++|+|+ +++|++|+.||.|++||++++.. .....|...|.+++|+| ++.+|
T Consensus 94 ~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l 173 (753)
T 3jro_A 94 VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (753)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCE
T ss_pred cccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEE
Confidence 67889999999999998 99999999999999999998733 23336889999999999 58999
Q ss_pred EEEEcCCeEEEEECCCCCCceEE-EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 138 TAGTSNGRVVFYDIRGKPQPLTV-LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 138 atGs~DGsV~IWDlrs~~k~v~~-l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
++|+.||.|++||+++....... ....+|...|++++|+|++ ..+.++++++.|+.|++||++..
T Consensus 174 ~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~---------~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV---------LLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC---------SSSEEEEEEESSSCEEEEEESSS
T ss_pred EEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCC---------CCCCEEEEEecCCEEEEecCCCC
Confidence 99999999999999886543222 2233799999999999951 01566777788999999999764
No 94
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=6.1e-22 Score=213.41 Aligned_cols=197 Identities=15% Similarity=0.157 Sum_probs=159.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc---eeEEEeCC------------------------------------------
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGA---KAAELKDP------------------------------------------ 35 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk---~v~~~~~~------------------------------------------ 35 (633)
+|+++|++|+++ .++.|++||+.+++ .+..+..+
T Consensus 11 ~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (450)
T 2vdu_B 11 LTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRTAA 89 (450)
T ss_dssp EECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------------
T ss_pred EecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccccccCc
Confidence 479999966655 57899999999998 66555432
Q ss_pred -----------CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC--CCCceeEEec--cCCCCeEEEEEcCCCCEEEEEe
Q 006743 36 -----------NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT--GRSPKVSWLK--QHSAPTAGISFSSDDKIIASVG 100 (633)
Q Consensus 36 -----------~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~--t~~~~v~~l~--~H~~~VtsLafSPdg~~LaSgS 100 (633)
+...|.+++|+|+++.++++|+.||.|+|||+. ++.. +..+. .|...|++++|+|++++|++++
T Consensus 90 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 168 (450)
T 2vdu_B 90 KVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV-LKLRKRFCFSKRPNAISIAEDDTTVIIAD 168 (450)
T ss_dssp ----------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC-EEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred cccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce-eeeeecccCCCCceEEEEcCCCCEEEEEe
Confidence 122589999999998446899999999999998 6654 44454 6778999999999999999999
Q ss_pred CCCeEEEEeCCCCceee----E-eeCCCCeEEEEEecC---CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeE
Q 006743 101 LDKKLYTYDPGSRRPSS----C-ITYEAPFSSLAFIDD---DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSS 172 (633)
Q Consensus 101 ~DGtVrIWDlrtgk~v~----~-i~h~~~ItsLafSPd---G~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~Vts 172 (633)
.|+.|++||+.+++... . ..|...|.+++|+|+ +++|++|+.|+.|++||+++... +..+ ..+|...|.+
T Consensus 169 ~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~-~~~~-~~~h~~~v~~ 246 (450)
T 2vdu_B 169 KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI-VDKW-LFGHKHFVSS 246 (450)
T ss_dssp TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC-EEEE-CCCCSSCEEE
T ss_pred CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce-eeee-ecCCCCceEE
Confidence 99999999998876543 3 368999999999999 99999999999999999998743 3321 2379999999
Q ss_pred EEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCCC
Q 006743 173 LCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (633)
Q Consensus 173 LafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~~ 214 (633)
++|+ ++++|+++ +.|+.|++||++.....
T Consensus 247 ~~~s-d~~~l~s~------------~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 247 ICCG-KDYLLLSA------------GGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp EEEC-STTEEEEE------------ESSSEEEEEETTTCCEE
T ss_pred EEEC-CCCEEEEE------------eCCCeEEEEECCCCcEe
Confidence 9998 76665544 67999999999765543
No 95
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.89 E-value=1.7e-21 Score=208.85 Aligned_cols=189 Identities=20% Similarity=0.234 Sum_probs=161.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEcc--CCCeEEEEEeCCCeEEEEECCCCCce-----
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGRSPK----- 73 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSp--dg~~lLaSGs~DGtI~IWDl~t~~~~----- 73 (633)
+|++++ +|++|+.||.|++||+.+++.+..+.+ |...|.+++|++ ++ .+|++|+.||.|++||+......
T Consensus 169 ~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~ 245 (464)
T 3v7d_B 169 KYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEG-HNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGE 245 (464)
T ss_dssp EECSTT-EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC-----
T ss_pred EEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECC-CCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccc
Confidence 367777 999999999999999999999888876 677889999985 44 48999999999999999766532
Q ss_pred -----------------eEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCC
Q 006743 74 -----------------VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDW 135 (633)
Q Consensus 74 -----------------v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~ 135 (633)
+..+.+|...|.++ ++++++|++++.|+.|++||+++++++..+ .|...|.+++|+|++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 323 (464)
T 3v7d_B 246 EHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERK 323 (464)
T ss_dssp -CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTT
T ss_pred cCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCC
Confidence 45677899999887 467999999999999999999999988777 5899999999999999
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 136 ~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
+|++|+.||.|++||++++ +++..+. +|...|.+++|++ .++++++.|+.|++||++..
T Consensus 324 ~l~sg~~dg~i~vwd~~~~-~~~~~~~--~h~~~v~~~~~~~--------------~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 324 RCISASMDTTIRIWDLENG-ELMYTLQ--GHTALVGLLRLSD--------------KFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp EEEEEETTSCEEEEETTTT-EEEEEEC--CCSSCEEEEEECS--------------SEEEEEETTSEEEEEETTTC
T ss_pred EEEEEeCCCcEEEEECCCC-cEEEEEe--CCCCcEEEEEEcC--------------CEEEEEeCCCcEEEEECCCC
Confidence 9999999999999999987 4445454 7999999999863 35677788999999998653
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=4.8e-22 Score=214.26 Aligned_cols=194 Identities=12% Similarity=0.079 Sum_probs=160.7
Q ss_pred CccCCCCEE-EEEECCCcEEEEECC--CCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce---
Q 006743 1 MYNCKDEHL-ASISLSGDLILHNLA--SGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK--- 73 (633)
Q Consensus 1 AFSpdG~~L-aSgs~DG~I~IWDl~--tgk~v~~~~~-~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~--- 73 (633)
+|+|+|++| ++|+.||.|+|||+. +++.+..+.. .+...|.+++|+|++. +|++|+.||.|++|++......
T Consensus 109 ~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 109 RLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT-TVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS-EEEEEETTSEEEEEETTSCCCSSCC
T ss_pred EEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC-EEEEEeCCCcEEEEecCCccccccc
Confidence 489999996 889999999999998 8888877753 2567789999999998 8999999999999999766531
Q ss_pred eEEeccCCCCeEEEEEcCC---CCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEecCCCEEEEEEcCCeEEE
Q 006743 74 VSWLKQHSAPTAGISFSSD---DKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (633)
Q Consensus 74 v~~l~~H~~~VtsLafSPd---g~~LaSgS~DGtVrIWDlrtgk~v~~i--~h~~~ItsLafSPdG~~LatGs~DGsV~I 148 (633)
...+.+|...|++++|+|+ +++|++++.|+.|++||+++++.+..+ .|...|.+++|+ ++++|++|+.|+.|++
T Consensus 188 ~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~v 266 (450)
T 2vdu_B 188 QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFA 266 (450)
T ss_dssp CCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEE
T ss_pred ceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEE
Confidence 2356789999999999999 999999999999999999998877663 689999999999 9999999999999999
Q ss_pred EECCCCCCceEEEeec-----------------------CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEc
Q 006743 149 YDIRGKPQPLTVLRAC-----------------------SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILM 205 (633)
Q Consensus 149 WDlrs~~k~v~~l~~~-----------------------~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkI 205 (633)
||+++++ ++..+... .....|.+++|+|++++++++ +..|+.|++
T Consensus 267 wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-----------~~~d~~i~i 334 (450)
T 2vdu_B 267 WDWKTGK-NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFF-----------VEATKCIII 334 (450)
T ss_dssp EETTTCC-EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEE-----------ETTCSEEEE
T ss_pred EECCCCc-EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEE-----------ECCCCeEEE
Confidence 9999874 34444311 234568899999865554433 226899999
Q ss_pred cCC
Q 006743 206 PDP 208 (633)
Q Consensus 206 WDl 208 (633)
||+
T Consensus 335 w~~ 337 (450)
T 2vdu_B 335 LEM 337 (450)
T ss_dssp EEE
T ss_pred EEe
Confidence 998
No 97
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.88 E-value=6.1e-21 Score=191.09 Aligned_cols=184 Identities=12% Similarity=0.103 Sum_probs=154.5
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCCceeEEecc-CCC
Q 006743 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ-HSA 82 (633)
Q Consensus 5 dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSp-dg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~-H~~ 82 (633)
++++|++++.||.|++|| .++.+..+.. +...+.+++|.+ ++. +|++++.||.|++||.. . ....+.. |..
T Consensus 113 ~~~~l~~~~~d~~i~~~d--~~~~~~~~~~-~~~~v~~~~~~~~~~~-~l~~~~~d~~i~i~d~~--~-~~~~~~~~~~~ 185 (313)
T 3odt_A 113 QDGVVISGSWDKTAKVWK--EGSLVYNLQA-HNASVWDAKVVSFSEN-KFLTASADKTIKLWQND--K-VIKTFSGIHND 185 (313)
T ss_dssp ETTEEEEEETTSEEEEEE--TTEEEEEEEC-CSSCEEEEEEEETTTT-EEEEEETTSCEEEEETT--E-EEEEECSSCSS
T ss_pred cCCEEEEEeCCCCEEEEc--CCcEEEeccc-CCCceeEEEEccCCCC-EEEEEECCCCEEEEecC--c-eEEEEeccCcc
Confidence 578999999999999999 6677777776 667788899998 555 89999999999999943 2 2445555 999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEE
Q 006743 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVL 161 (633)
Q Consensus 83 ~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l 161 (633)
.|.+++|+|++. +++++.|+.|++||+++++.+..+ .|...|.+++|+|++ .|++++.||.|++||+++. ++...+
T Consensus 186 ~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~-~~~~~~ 262 (313)
T 3odt_A 186 VVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENG-SLKQVI 262 (313)
T ss_dssp CEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTC-CEEEEE
T ss_pred cEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCC-ceeEEE
Confidence 999999999888 999999999999999999988777 489999999999999 6899999999999999987 444555
Q ss_pred eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 162 RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 162 ~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
. .|...|.+++|+|+++ +++++.|+.|++||+.....
T Consensus 263 ~--~~~~~i~~~~~~~~~~-------------~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 263 T--LPAISIWSVDCMSNGD-------------IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp E--CSSSCEEEEEECTTSC-------------EEEEETTSCEEEEESCGGGC
T ss_pred e--ccCceEEEEEEccCCC-------------EEEEeCCCcEEEEeCCCCce
Confidence 5 6888999999999643 33456799999999875433
No 98
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.88 E-value=1e-21 Score=200.01 Aligned_cols=191 Identities=10% Similarity=0.051 Sum_probs=155.7
Q ss_pred CccCCCC-EEEEEECCCcEEEEEC-CCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC--------
Q 006743 1 MYNCKDE-HLASISLSGDLILHNL-ASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG-------- 69 (633)
Q Consensus 1 AFSpdG~-~LaSgs~DG~I~IWDl-~tgk~v~~~~~-~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t-------- 69 (633)
+|+++++ +|++|+.||.|++||+ .+++. ..+.. .|...|.+++|+| +. +|++++.|+.|++||++.
T Consensus 63 ~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~ 139 (342)
T 1yfq_A 63 NFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAV 139 (342)
T ss_dssp EEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEE
T ss_pred EECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccc
Confidence 4889999 9999999999999999 77755 44543 1677889999999 66 899999999999999976
Q ss_pred -CCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC-Ccee---eEeeCCCCeEEEEEec-CCCEEEEEEcC
Q 006743 70 -RSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-RRPS---SCITYEAPFSSLAFID-DDWILTAGTSN 143 (633)
Q Consensus 70 -~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrt-gk~v---~~i~h~~~ItsLafSP-dG~~LatGs~D 143 (633)
.+. +..+. |...|.+++|++++ +++++.|+.|++||+++ +... ....+...|.+++|+| ++++|++++.|
T Consensus 140 ~~~~-~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d 215 (342)
T 1yfq_A 140 KNLN-SNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSID 215 (342)
T ss_dssp EESC-SSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETT
T ss_pred cCCe-eeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecC
Confidence 442 23333 88999999999876 99999999999999998 5432 2235788999999999 99999999999
Q ss_pred CeEEEEECCCC-----CCceEEEeecCC---------CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 144 GRVVFYDIRGK-----PQPLTVLRACSS---------SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 144 GsV~IWDlrs~-----~k~v~~l~~~~H---------~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
|.|++||++.. .+....+. .| ...|.+++|+|++++| ++++.|+.|++||+.
T Consensus 216 g~i~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~s~~~~~l------------~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 216 GRVAVEFFDDQGDDYNSSKRFAFR--CHRLNLKDTNLAYPVNSIEFSPRHKFL------------YTAGSDGIISCWNLQ 281 (342)
T ss_dssp SEEEEEECCTTCCSTTCTTCEEEE--CCCCCTTCCSSCCCEEEEEECTTTCCE------------EEEETTSCEEEEETT
T ss_pred CcEEEEEEcCCCcccccccceeee--cccccccccccceeEEEEEEcCCCCEE------------EEecCCceEEEEcCc
Confidence 99999999876 35566666 45 4499999999965554 445679999999986
Q ss_pred CCC
Q 006743 210 PSV 212 (633)
Q Consensus 210 ~~~ 212 (633)
...
T Consensus 282 ~~~ 284 (342)
T 1yfq_A 282 TRK 284 (342)
T ss_dssp TTE
T ss_pred cHh
Confidence 543
No 99
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=9.5e-22 Score=232.84 Aligned_cols=192 Identities=9% Similarity=0.078 Sum_probs=157.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++||+|+.||.|+|||..+.+....+. +...|.+|+|+| ++ +|++++.|++|+|||+.+++. +..+. |
T Consensus 24 afspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~--~~~~V~~l~fsp-g~-~L~S~s~D~~v~lWd~~~~~~-~~~~~-~ 97 (902)
T 2oaj_A 24 AFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE--DRSAIKEMRFVK-GI-YLVVINAKDTVYVLSLYSQKV-LTTVF-V 97 (902)
T ss_dssp EEETTTTEEEEEETTSEEEEECSTTCEEEEECS--SCCCEEEEEEET-TT-EEEEEETTCEEEEEETTTCSE-EEEEE-C
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC--CCCCEEEEEEcC-CC-EEEEEECcCeEEEEECCCCcE-EEEEc-C
Confidence 589999999999999999999987776655443 567899999999 76 899999999999999998774 44443 7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee-----------E-eeCCCCeEEEEEecC-CCEEEEEEcCCeEE
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSS-----------C-ITYEAPFSSLAFIDD-DWILTAGTSNGRVV 147 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~-----------~-i~h~~~ItsLafSPd-G~~LatGs~DGsV~ 147 (633)
...|++++|+|++++|++|+.||.|++||++++++.. . ..|.+.|.+++|+|+ +.+|++|+.||.|
T Consensus 98 ~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v- 176 (902)
T 2oaj_A 98 PGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL- 176 (902)
T ss_dssp SSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-
T ss_pred CCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-
Confidence 7899999999999999999999999999999887531 1 247889999999996 5789999999999
Q ss_pred EEECCCCCCceEEEeec----------------CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 148 FYDIRGKPQPLTVLRAC----------------SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 148 IWDlrs~~k~v~~l~~~----------------~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
+||+++. +++..+... .|...|++++|+|+|+ +|++++.|+.|++||++..
T Consensus 177 lWd~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~------------~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 177 TYSLVEN-EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL------------HIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp EEETTTT-EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS------------EEEEEETTCCEEEEETTTC
T ss_pred EEECCCC-ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC------------EEEEEECCCeEEEEECCCC
Confidence 9999987 344444421 2357899999999654 4555678999999999754
Q ss_pred C
Q 006743 212 V 212 (633)
Q Consensus 212 ~ 212 (633)
.
T Consensus 244 ~ 244 (902)
T 2oaj_A 244 H 244 (902)
T ss_dssp C
T ss_pred c
Confidence 3
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.88 E-value=5.9e-21 Score=191.17 Aligned_cols=186 Identities=13% Similarity=0.140 Sum_probs=154.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCC---ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASG---AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tg---k~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l 77 (633)
+|+|++++|++++.||.|++|++.+. +.+..+.. |...|.+++| +++ +|++++.||.|++|| ... ....+
T Consensus 66 ~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--~~~-~l~~~~~d~~i~~~d--~~~-~~~~~ 138 (313)
T 3odt_A 66 CYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIG-HQGNVCSLSF--QDG-VVISGSWDKTAKVWK--EGS-LVYNL 138 (313)
T ss_dssp EEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECC-CSSCEEEEEE--ETT-EEEEEETTSEEEEEE--TTE-EEEEE
T ss_pred EECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhh-cccCEEEEEe--cCC-EEEEEeCCCCEEEEc--CCc-EEEec
Confidence 48999999999999999999998764 44566654 6677888999 344 899999999999999 222 46778
Q ss_pred ccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 006743 78 KQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (633)
Q Consensus 78 ~~H~~~VtsLafSP-dg~~LaSgS~DGtVrIWDlrtgk~v~~i--~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~ 154 (633)
..|...|.+++|.| ++++|++++.|+.|++||. ++....+ .+...+.+++|+|++. +++++.||.|++||+++.
T Consensus 139 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~ 215 (313)
T 3odt_A 139 QAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG 215 (313)
T ss_dssp ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC
T ss_pred ccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch
Confidence 88999999999999 9999999999999999994 3444444 3889999999999998 999999999999999987
Q ss_pred CCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 155 PQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 155 ~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
+++..+. .|...|++++|+|++ .+++++.|+.|++||++...
T Consensus 216 -~~~~~~~--~~~~~i~~~~~~~~~-------------~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 216 -DVLRTYE--GHESFVYCIKLLPNG-------------DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp -CEEEEEE--CCSSCEEEEEECTTS-------------CEEEEETTSEEEEECTTTCC
T ss_pred -hhhhhhh--cCCceEEEEEEecCC-------------CEEEEecCCEEEEEECCCCc
Confidence 4445555 799999999999964 25566779999999987644
No 101
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.88 E-value=2.2e-21 Score=213.11 Aligned_cols=193 Identities=14% Similarity=0.155 Sum_probs=162.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCC----ceeEEEeCCCCCc-EEEEEEcc--CCCeEEEEEeCCCeEEEEECCCC---
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASG----AKAAELKDPNEQV-LRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGR--- 70 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tg----k~v~~~~~~~~~~-VssLafSp--dg~~lLaSGs~DGtI~IWDl~t~--- 70 (633)
+|+|+|++|++++ ++.|+|||+.++ +....+.+ |... |.+++|+| +++ +|++|+.||.|+|||+.++
T Consensus 25 ~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~-h~~~~v~~~~~sp~~~~~-~l~s~~~dg~v~vw~~~~~~~~ 101 (615)
T 1pgu_A 25 SYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTG-HGSSVVTTVKFSPIKGSQ-YLCSGDESGKVIVWGWTFDKES 101 (615)
T ss_dssp EEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECT-TTTSCEEEEEECSSTTCC-EEEEEETTSEEEEEEEEEEGGG
T ss_pred EECCCCCEEEEec-CCeEEEEECCCCCCccccceEEec-CCCceEEEEEECcCCCCC-EEEEecCCCEEEEEeCCCCccc
Confidence 5899999999998 889999999988 88888886 5566 99999999 987 8999999999999999643
Q ss_pred ----CceeEEeccCCCCeEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCC-EEEEE
Q 006743 71 ----SPKVSWLKQHSAPTAGISFSSDDKIIASVGLD----KKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDW-ILTAG 140 (633)
Q Consensus 71 ----~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~D----GtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~-~LatG 140 (633)
......+..|...|.+++|+|++++|++++.+ +.|++|| .++.+..+ .|...|.+++|+|++. +++++
T Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 179 (615)
T 1pgu_A 102 NSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTV 179 (615)
T ss_dssp TEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEE
T ss_pred ccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEE
Confidence 22356777899999999999999999999988 6899998 44555554 6899999999999997 89999
Q ss_pred EcCCeEEEEECCCCCCceEEEeecCCCC---CeeEEEEccC-CCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 141 TSNGRVVFYDIRGKPQPLTVLRACSSSE---AVSSLCWQRA-KPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 141 s~DGsV~IWDlrs~~k~v~~l~~~~H~~---~VtsLafsPd-g~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
+.||.|++||+++. +.+..+. +|.. .|++++|+|+ ++ ++++++.|+.|++||++....
T Consensus 180 ~~d~~v~vwd~~~~-~~~~~~~--~~~~~~~~v~~~~~~~~~~~------------~l~~~~~dg~i~vwd~~~~~~ 241 (615)
T 1pgu_A 180 GDDGSVVFYQGPPF-KFSASDR--THHKQGSFVRDVEFSPDSGE------------FVITVGSDRKISCFDGKSGEF 241 (615)
T ss_dssp ETTTEEEEEETTTB-EEEEEEC--SSSCTTCCEEEEEECSTTCC------------EEEEEETTCCEEEEETTTCCE
T ss_pred eCCCcEEEEeCCCc-ceeeeec--ccCCCCceEEEEEECCCCCC------------EEEEEeCCCeEEEEECCCCCE
Confidence 99999999999876 3344444 6888 9999999996 44 455557799999999875543
No 102
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.88 E-value=3e-21 Score=212.03 Aligned_cols=187 Identities=14% Similarity=0.206 Sum_probs=156.2
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeC-CCeEEEEECCCCCceeEEeccC
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-DGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~-DGtI~IWDl~t~~~~v~~l~~H 80 (633)
|+++|.+++++ .++.+.+|++.+++.+..+. +...+.+++|+ ++ +|++++. |+.|++||+.+.......+..|
T Consensus 414 ~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~-~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~ 487 (615)
T 1pgu_A 414 ANNDGFTAVLT-NDDDLLILQSFTGDIIKSVR--LNSPGSAVSLS--QN-YVAVGLEEGNTIQVFKLSDLEVSFDLKTPL 487 (615)
T ss_dssp ECSSSEEEEEE-TTSEEEEEETTTCCEEEEEE--CSSCEEEEEEC--SS-EEEEEETTTSCEEEEETTEEEEEEECSSCC
T ss_pred EcCCCCEEEEe-CCCceEEEeccCCceeeecc--cCCCceEEEEc--CC-EEEEeecCCCeEEEEECCCccccccccCCc
Confidence 45566555544 56666666666777777776 56778899999 55 8999999 9999999998765322567789
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee--CCCCeEEEEEec----------CCCEEEEEEcCCeEEE
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT--YEAPFSSLAFID----------DDWILTAGTSNGRVVF 148 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~--h~~~ItsLafSP----------dG~~LatGs~DGsV~I 148 (633)
...|++++|+|++++|++++.|+.|++||+.+++.+..+. |...|.+++|+| ++++|++++.||.|++
T Consensus 488 ~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~i 567 (615)
T 1pgu_A 488 RAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI 567 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEE
T ss_pred cCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEE
Confidence 9999999999999999999999999999999999887763 899999999999 9999999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 149 WDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
||+++..+++..+. +|...|++++|+|+ +. |++++.|+.|++||+.
T Consensus 568 w~~~~~~~~~~~~~--~h~~~v~~l~~s~~------------~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 568 YSVKRPMKIIKALN--AHKDGVNNLLWETP------------ST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp EESSCTTCCEEETT--SSTTCEEEEEEEET------------TE-EEEEETTSCEEEEEEC
T ss_pred EECCCCceechhhh--cCccceEEEEEcCC------------CC-eEEecCCceEEEEeee
Confidence 99998755555554 89999999999995 34 6666889999999985
No 103
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=8.1e-22 Score=220.42 Aligned_cols=196 Identities=9% Similarity=0.052 Sum_probs=142.2
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCcee----EEEeCCCCCcEEEEEEccCC-----CeEEEEEeCCCeEEEEECCCCCce
Q 006743 3 NCKDEHLASISLSGDLILHNLASGAKA----AELKDPNEQVLRVLDYSRNS-----RHLLVTAGDDGTLHLWDTTGRSPK 73 (633)
Q Consensus 3 SpdG~~LaSgs~DG~I~IWDl~tgk~v----~~~~~~~~~~VssLafSpdg-----~~lLaSGs~DGtI~IWDl~t~~~~ 73 (633)
+|+++.|++++.|+.|+|||+.+++.. ..+. ++...|..|+|+|++ ..+|++++.||+|+|||+......
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~-~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~ 248 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV-HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATD 248 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEE-ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEE-ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccc
Confidence 345556666778999999999877643 2233 456778999999972 238999999999999999765321
Q ss_pred ----------eEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eeeEe-eCCCCeEEE--EEecCC-CEEE
Q 006743 74 ----------VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRR-PSSCI-TYEAPFSSL--AFIDDD-WILT 138 (633)
Q Consensus 74 ----------v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk-~v~~i-~h~~~ItsL--afSPdG-~~La 138 (633)
...+.+|...|++++|+++ ..|++|+.||+|++||++++. +...+ .|...|.++ +|+|++ .+|+
T Consensus 249 ~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~la 327 (524)
T 2j04_B 249 VHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVS 327 (524)
T ss_dssp SSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEE
T ss_pred cccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEE
Confidence 2467889999999999985 489999999999999999764 33333 699999999 578888 8999
Q ss_pred EEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 139 AGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 139 tGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
+|+.||+|+|||+++.. +...+........|.+++|+|+++. +++++.|+.|++||++....
T Consensus 328 S~S~D~tvklWD~~~~~-~~~~~~~~~~~~~v~~v~fsp~~~~------------l~s~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 328 TVAVDGYFYIFNPKDIA-TTKTTVSRFRGSNLVPVVYCPQIYS------------YIYSDGASSLRAVPSRAAFA 389 (524)
T ss_dssp EEETTSEEEEECGGGHH-HHCEEEEECSCCSCCCEEEETTTTE------------EEEECSSSEEEEEETTCTTC
T ss_pred EeccCCeEEEEECCCCC-cccccccccccCcccceEeCCCcCe------------EEEeCCCCcEEEEECccccc
Confidence 99999999999999863 3333432122235889999996544 44556789999999987554
No 104
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.88 E-value=1.1e-20 Score=202.34 Aligned_cols=181 Identities=19% Similarity=0.315 Sum_probs=154.3
Q ss_pred CCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce--eEEeccCC
Q 006743 4 CKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK--VSWLKQHS 81 (633)
Q Consensus 4 pdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~--v~~l~~H~ 81 (633)
.++++|++|+.||.|++||+.+++.+..+.+ |...|.+++|++ . +|++|+.||.|++||+.+.... ...+.+|.
T Consensus 181 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 256 (435)
T 1p22_A 181 YDERVIITGSSDSTVRVWDVNTGEMLNTLIH-HCEAVLHLRFNN--G-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 256 (435)
T ss_dssp CCSSEEEEEETTSCEEEEESSSCCEEEEECC-CCSCEEEEECCT--T-EEEEEETTSCEEEEECSSSSCCEEEEEECCCS
T ss_pred ECCCEEEEEcCCCeEEEEECCCCcEEEEEcC-CCCcEEEEEEcC--C-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCC
Confidence 4788999999999999999999999988876 667788899974 3 8999999999999999876643 26678999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 006743 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (633)
Q Consensus 82 ~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~ 160 (633)
..|.+++| ++++|++|+.|+.|++||+++++.+..+ .|...|.+++|+ +.+|++|+.||.|++||++++ +++..
T Consensus 257 ~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~-~~~~~ 331 (435)
T 1p22_A 257 AAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG-ACLRV 331 (435)
T ss_dssp SCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC-CEEEE
T ss_pred CcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC-CEEEE
Confidence 99999999 6899999999999999999999988777 588999999995 789999999999999999987 44455
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 161 l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
+. +|...|.+++| ++ .++++++.|+.|++||++
T Consensus 332 ~~--~h~~~v~~~~~--~~------------~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 332 LE--GHEELVRCIRF--DN------------KRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp EC--CCSSCEEEEEC--CS------------SEEEEEETTSCEEEEEHH
T ss_pred Ee--CCcCcEEEEEe--cC------------CEEEEEeCCCcEEEEECC
Confidence 54 79999999998 32 345666778888888875
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.4e-21 Score=224.23 Aligned_cols=196 Identities=13% Similarity=0.180 Sum_probs=161.9
Q ss_pred CccCC--CCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ce
Q 006743 1 MYNCK--DEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PK 73 (633)
Q Consensus 1 AFSpd--G~~LaSgs~DG~I~IWDl~tgk--~v~~~~~~~~~~VssLafSpd--g~~lLaSGs~DGtI~IWDl~t~~-~~ 73 (633)
+|+++ +++|++|+.||.|++||+.+++ .+..+.. |...|.+++|+|+ +. +|++|+.||.|++||+.... ..
T Consensus 60 ~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~ 137 (753)
T 3jro_A 60 DWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS 137 (753)
T ss_dssp EECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCC
T ss_pred EecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccC-CCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcc
Confidence 36777 9999999999999999998886 5555554 6778999999999 76 89999999999999998763 23
Q ss_pred eEEeccCCCCeEEEEEcC-------------CCCEEEEEeCCCeEEEEeCCCCc----eeeEe-eCCCCeEEEEEecC--
Q 006743 74 VSWLKQHSAPTAGISFSS-------------DDKIIASVGLDKKLYTYDPGSRR----PSSCI-TYEAPFSSLAFIDD-- 133 (633)
Q Consensus 74 v~~l~~H~~~VtsLafSP-------------dg~~LaSgS~DGtVrIWDlrtgk----~v~~i-~h~~~ItsLafSPd-- 133 (633)
...+..|...|.+++|+| ++.+|++|+.||.|++||++++. +...+ .|...|.+++|+|+
T Consensus 138 ~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~ 217 (753)
T 3jro_A 138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 217 (753)
T ss_dssp CEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred eeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCC
Confidence 456778999999999999 58999999999999999998874 33333 58999999999999
Q ss_pred -CCEEEEEEcCCeEEEEECCCCCCce--EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 134 -DWILTAGTSNGRVVFYDIRGKPQPL--TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 134 -G~~LatGs~DGsV~IWDlrs~~k~v--~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+.+|++|+.||.|++||+++..... .......|...|++++|+|+++++ ++++.|+.|++||+..
T Consensus 218 ~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l------------~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 218 LRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVL------------ALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCE------------EEECSSSCEECCBCCS
T ss_pred CCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEE------------EEEcCCCEEEEEecCC
Confidence 8999999999999999999863211 222333688999999999966555 4446799999999974
No 106
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.87 E-value=8.6e-21 Score=217.03 Aligned_cols=196 Identities=15% Similarity=0.242 Sum_probs=170.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|+|++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++++.||.|++||+.+.......+..|
T Consensus 62 ~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 139 (814)
T 3mkq_A 62 KFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGH 139 (814)
T ss_dssp EEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSS-EEEEEETTSEEEEEEGGGTSEEEEEEECC
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-CCCCEEEEEEeCCCC-EEEEEcCCCEEEEEECCCCceEEEEEcCC
Confidence 4899999999999999999999999999998886 667789999999998 79999999999999998875557788899
Q ss_pred CCCeEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeEee--CCCCeEEEEEec--CCCEEEEEEcCCeEEEEECCCCC
Q 006743 81 SAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCIT--YEAPFSSLAFID--DDWILTAGTSNGRVVFYDIRGKP 155 (633)
Q Consensus 81 ~~~VtsLafSP-dg~~LaSgS~DGtVrIWDlrtgk~v~~i~--h~~~ItsLafSP--dG~~LatGs~DGsV~IWDlrs~~ 155 (633)
...|.+++|+| ++++|++++.||.|++||++++.....+. +...+.+++|+| ++.+|++++.||.|++||+++.
T Consensus 140 ~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~- 218 (814)
T 3mkq_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK- 218 (814)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT-
T ss_pred CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC-
Confidence 99999999999 89999999999999999999887766653 448899999999 9999999999999999999887
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 156 k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
.++..+. +|...|.+++|+|++++ +++++.|+.|++||+.....
T Consensus 219 ~~~~~~~--~~~~~v~~~~~~~~~~~------------l~~~~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 219 SCVATLE--GHMSNVSFAVFHPTLPI------------IISGSEDGTLKIWNSSTYKV 262 (814)
T ss_dssp EEEEEEE--CCSSCEEEEEECSSSSE------------EEEEETTSCEEEEETTTCSE
T ss_pred cEEEEEc--CCCCCEEEEEEcCCCCE------------EEEEeCCCeEEEEECCCCcE
Confidence 3444444 79999999999996554 45557799999999876443
No 107
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.87 E-value=1.6e-20 Score=201.25 Aligned_cols=185 Identities=14% Similarity=0.267 Sum_probs=158.2
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~ 81 (633)
+..++++|++|+.||.|++||+.+++.+..+.+ |...|.+++| +++ +|++|+.||.|++||+.+++. +..+..|.
T Consensus 139 ~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~--~~~-~l~sg~~dg~i~vwd~~~~~~-~~~~~~h~ 213 (435)
T 1p22_A 139 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQY--DER-VIITGSSDSTVRVWDVNTGEM-LNTLIHHC 213 (435)
T ss_dssp EECCSSEEEEEESSSCEEEEESSSCCEEEEECC-CSSCEEEEEC--CSS-EEEEEETTSCEEEEESSSCCE-EEEECCCC
T ss_pred EEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcC-CCCcEEEEEE--CCC-EEEEEcCCCeEEEEECCCCcE-EEEEcCCC
Confidence 456899999999999999999999999998886 6677888888 555 899999999999999998874 67788999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee---eEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc
Q 006743 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS---SCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (633)
Q Consensus 82 ~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v---~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~ 157 (633)
..|.+++|+ +.+|++|+.|+.|++||++++... ..+ .|...|.+++| ++++|++|+.||.|++||+++. +.
T Consensus 214 ~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~-~~ 288 (435)
T 1p22_A 214 EAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC-EF 288 (435)
T ss_dssp SCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC-CE
T ss_pred CcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC-cE
Confidence 999999997 569999999999999999987755 222 68899999999 6889999999999999999987 44
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 158 v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
+..+. +|...|.+++|+. .++++++.|+.|++||++...
T Consensus 289 ~~~~~--~~~~~v~~~~~~~--------------~~l~~g~~dg~i~iwd~~~~~ 327 (435)
T 1p22_A 289 VRTLN--GHKRGIACLQYRD--------------RLVVSGSSDNTIRLWDIECGA 327 (435)
T ss_dssp EEEEE--CCSSCEEEEEEET--------------TEEEEEETTSCEEEEETTTCC
T ss_pred EEEEc--CCCCcEEEEEeCC--------------CEEEEEeCCCeEEEEECCCCC
Confidence 55555 7999999999842 356777889999999997543
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=1.8e-21 Score=207.12 Aligned_cols=207 Identities=12% Similarity=0.112 Sum_probs=147.1
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEE--E--eCCCCCcEEEEEEcc--------CCCeEEEEEeCCCeEEEEECCC
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAE--L--KDPNEQVLRVLDYSR--------NSRHLLVTAGDDGTLHLWDTTG 69 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~--~--~~~~~~~VssLafSp--------dg~~lLaSGs~DGtI~IWDl~t 69 (633)
+.+++++|++|+.|++|+|||+.+++.... + ..+|...|.+|+|+| +++ +|++|+.|++|+|||+.+
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEETTSEEEEEEEET
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCC-EEEEEECCCeEEEEECCC
Confidence 455677899999999999999988765432 1 134778899999998 555 899999999999999987
Q ss_pred CCceeEEeccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeE--------------------------eeCC
Q 006743 70 RSPKVSWLKQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPGSRRPSSC--------------------------ITYE 122 (633)
Q Consensus 70 ~~~~v~~l~~H~~~VtsLafSPdg-~~LaSgS~DGtVrIWDlrtgk~v~~--------------------------i~h~ 122 (633)
..+ +..+..|...|.+++|+|++ ++|++++.|++|++||+++++.... ..|.
T Consensus 176 ~~~-~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 176 EGP-ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp TEE-EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred Cce-eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 664 45667888999999999966 5899999999999999987654321 1356
Q ss_pred CCeEEEEEe-cCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEE--------EeccCCCCeE
Q 006743 123 APFSSLAFI-DDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFI--------DETTCKAETA 193 (633)
Q Consensus 123 ~~ItsLafS-PdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~La--------s~s~~sd~~l 193 (633)
..+.++.|. ++++.|++++.|+.|++||+..... ...+. .|...+..+.+.|+.+.+. ......++.+
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~-~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND-YNEIS--DSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYF 331 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTTSEEEEEEC----------------------CCSCSEEEECSSCCSSCCEECSSCTTEE
T ss_pred ccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC-CceEe--eecCccccEEEccccccccccCcceeEEEccCCCCEE
Confidence 678889987 7999999999999999999987632 22232 5667777777776544322 1112346677
Q ss_pred EEEeeCCCeEEccCCCCCCC
Q 006743 194 LLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 194 LlSgs~Dg~IkIWDlr~~~~ 213 (633)
+++++.|+.|++||+.....
T Consensus 332 ~~sgs~Dg~V~lwd~~~~~~ 351 (393)
T 4gq1_A 332 ATAHSQHGLIQLINTYEKDS 351 (393)
T ss_dssp EEEETTTTEEEEEETTCTTC
T ss_pred EEEECCCCEEEEEECCCCcE
Confidence 88888999999999865443
No 109
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.87 E-value=9.8e-21 Score=198.80 Aligned_cols=192 Identities=12% Similarity=0.119 Sum_probs=146.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+|||++|++|+.+| ++|||+.+++....... ..+..+++.++++.++++++.|++|+|||..+++. +..+. |
T Consensus 26 ~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~-~~~~~-~ 99 (355)
T 3vu4_A 26 EFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM---RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD-VSRIK-V 99 (355)
T ss_dssp EECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC---SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEE-EEEEE-C
T ss_pred EECCCCCEEEEEcCCE-EEEEecCCcceeeeeec---CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcE-EEEEE-C
Confidence 5899999999988775 78999987776655442 13566788888875557788899999999988874 34443 6
Q ss_pred CCCeEEEEEcCCC-----------------------------------CEEEE--EeCCCeEEEEeCCCCc---------
Q 006743 81 SAPTAGISFSSDD-----------------------------------KIIAS--VGLDKKLYTYDPGSRR--------- 114 (633)
Q Consensus 81 ~~~VtsLafSPdg-----------------------------------~~LaS--gS~DGtVrIWDlrtgk--------- 114 (633)
...|.+++|+++. .++++ |+.||.|++||+++++
T Consensus 100 ~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~ 179 (355)
T 3vu4_A 100 DAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGV 179 (355)
T ss_dssp SSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-----------
T ss_pred CCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccc
Confidence 6789888887642 23444 5788899999998765
Q ss_pred --------eeeEeeCCCCeEEEEEecCCCEEEEEEcCCe-EEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006743 115 --------PSSCITYEAPFSSLAFIDDDWILTAGTSNGR-VVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 115 --------~v~~i~h~~~ItsLafSPdG~~LatGs~DGs-V~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~ 185 (633)
......|...|.+++|+|+|++|++|+.||+ |+|||++++. ++..+....|...|.+++|+|++++
T Consensus 180 ~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~-~~~~~~~g~h~~~v~~~~~s~~~~~---- 254 (355)
T 3vu4_A 180 QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV-LVREFRRGLDRADVVDMKWSTDGSK---- 254 (355)
T ss_dssp -------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC-EEEEEECTTCCSCEEEEEECTTSCE----
T ss_pred cccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc-EEEEEEcCCCCCcEEEEEECCCCCE----
Confidence 2233369999999999999999999999998 9999999874 3444442228999999999996554
Q ss_pred ccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 186 TTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 186 s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
|++++.|+.|++||+...
T Consensus 255 --------l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 255 --------LAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp --------EEEEETTCEEEEEESSCC
T ss_pred --------EEEEECCCEEEEEEccCC
Confidence 555577999999999653
No 110
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.87 E-value=2.2e-20 Score=200.07 Aligned_cols=187 Identities=16% Similarity=0.191 Sum_probs=160.8
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~ 81 (633)
+.++|++|++|+.||.|++||+.+++.+..+.+ |...|.+++|+ +. +|++|+.||.|++||+.+++. +..+.+|.
T Consensus 125 ~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~--~~-~l~s~~~dg~i~vwd~~~~~~-~~~~~~h~ 199 (445)
T 2ovr_B 125 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG-HTGGVWSSQMR--DN-IIISGSTDRTLKVWNAETGEC-IHTLYGHT 199 (445)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTCCEEEECCC-CSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTTEE-EEEECCCS
T ss_pred EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcC-CCCCEEEEEec--CC-EEEEEeCCCeEEEEECCcCcE-EEEECCCC
Confidence 567899999999999999999999999998886 66778889997 33 899999999999999988874 67788999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 006743 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (633)
Q Consensus 82 ~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~ 160 (633)
..|.+++|+ ++.|++|+.|+.|++||+++++.+..+ .|...|.+++| ++.+|++|+.||.|++||+++. +++..
T Consensus 200 ~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~-~~~~~ 274 (445)
T 2ovr_B 200 STVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE-TCLHT 274 (445)
T ss_dssp SCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT-EEEEE
T ss_pred CcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC-cEeEE
Confidence 999999996 678999999999999999999888776 58899999999 7889999999999999999887 34444
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCCC
Q 006743 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (633)
Q Consensus 161 l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~~ 214 (633)
+. +|...|.+++| + +.++++++.|+.|++||++.....
T Consensus 275 ~~--~~~~~v~~~~~--~------------~~~l~~~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 275 LQ--GHTNRVYSLQF--D------------GIHVVSGSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp EC--CCSSCEEEEEE--C------------SSEEEEEETTSCEEEEETTTCCEE
T ss_pred ec--CCCCceEEEEE--C------------CCEEEEEeCCCeEEEEECCCCCEE
Confidence 44 79999999998 3 235666678999999999765543
No 111
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.87 E-value=8.6e-21 Score=201.71 Aligned_cols=174 Identities=12% Similarity=0.129 Sum_probs=129.2
Q ss_pred CCcEEEEEC-CCCceeEEEeCCCCCcEEEEEEcc---CCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC---CCeEEE
Q 006743 15 SGDLILHNL-ASGAKAAELKDPNEQVLRVLDYSR---NSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS---APTAGI 87 (633)
Q Consensus 15 DG~I~IWDl-~tgk~v~~~~~~~~~~VssLafSp---dg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~---~~VtsL 87 (633)
|+.|++|++ .+++.+..+.. |...++.++|++ ++. +|++|+.|++|+|||+.+++. ++.+.+|. ..|.++
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~-~~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk~-l~tL~g~~~~v~~v~~v 232 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFL-MPPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQL-LKKMHIDDSYQASVCHK 232 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEE-CCCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTCCE-EEEEECCC---CCCEEE
T ss_pred CCcEEEEEECCCCceeeeecc-CCCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCCcE-EEEEcCCCcceeeeEEE
Confidence 788888888 45776666665 445566678887 455 899999999999999999885 56666543 467888
Q ss_pred EEcCCCCEE------------EEEeCCCeEEEEeCCCCceeeEe------eCCCCeEEEEEecCCCEEEEEEcCCeEEEE
Q 006743 88 SFSSDDKII------------ASVGLDKKLYTYDPGSRRPSSCI------TYEAPFSSLAFIDDDWILTAGTSNGRVVFY 149 (633)
Q Consensus 88 afSPdg~~L------------aSgS~DGtVrIWDlrtgk~v~~i------~h~~~ItsLafSPdG~~LatGs~DGsV~IW 149 (633)
+|+|++.++ ++|+.|++|++||..+++.+..+ +|...+.+..++ +.++++|+.||+|+||
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIW 310 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIW 310 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEE
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEE
Confidence 999999886 56888999999999999887654 234444444444 8899999999999999
Q ss_pred ECCCCCCceEEEeecCCCCCee-EEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 150 DIRGKPQPLTVLRACSSSEAVS-SLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 150 Dlrs~~k~v~~l~~~~H~~~Vt-sLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
|+.++ +.+..+. +|...+. +++|+|+|++ |++++.|++|+|||+
T Consensus 311 Dl~tG-k~l~tL~--gH~~~vvs~vafSPDG~~------------LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 311 DLLLG-QCTALLP--PVSDQHWSFVKWSGTDSH------------LLAGQKDGNIFVYHY 355 (356)
T ss_dssp ETTTC-SEEEEEC--CC--CCCCEEEECSSSSE------------EEEECTTSCEEEEEE
T ss_pred ECCCC-cEEEEec--CCCCCeEEEEEECCCCCE------------EEEEECCCcEEEecC
Confidence 99988 4555555 6776655 6899996555 455578999999985
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=2.9e-21 Score=205.55 Aligned_cols=177 Identities=12% Similarity=0.125 Sum_probs=129.1
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee----------
Q 006743 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV---------- 74 (633)
Q Consensus 5 dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v---------- 74 (633)
||++||+|+.|++|+|||+.++..+..+..++ ..+.+++|+|++.++|++|+.||+|++||+++.+...
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~-~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~ 233 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLS-SPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKN 233 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECS-SCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSC
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCC-CCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCccc
Confidence 78999999999999999998888777776644 5677899999987789999999999999997665321
Q ss_pred --------------EEeccCCCCeEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCC--------------
Q 006743 75 --------------SWLKQHSAPTAGISFS-SDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAP-------------- 124 (633)
Q Consensus 75 --------------~~l~~H~~~VtsLafS-Pdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~-------------- 124 (633)
....+|...|.+++|. ++++.|++++.|+++++||+..++....+ .+...
T Consensus 234 ~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 313 (393)
T 4gq1_A 234 PWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGIS 313 (393)
T ss_dssp CCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEEC
T ss_pred ceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccc
Confidence 1124678889999997 59999999999999999999876544333 12222
Q ss_pred ----eEEEEEec--CCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006743 125 ----FSSLAFID--DDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 125 ----ItsLafSP--dG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~ 185 (633)
.....|+| ++.++++|+.||.|+|||+.++.... ... .|..+|.+++|+|+|++|+++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~-~~~--~~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 314 LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS-IPI--QLGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE-EEE--ECSSCEEEEEECTTSSEEEEE
T ss_pred ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE-Eec--CCCCcEEEEEEcCCCCEEEEE
Confidence 22233444 34466778889999999999875433 333 588899999999988777665
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.86 E-value=6.3e-20 Score=184.48 Aligned_cols=197 Identities=15% Similarity=0.199 Sum_probs=158.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~-~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
+|++++ +||+| .|++|+|||+.+++.+..+.. .|...|.+|+|+|+++ +|++|+.||+|+|||+++++. +..+.+
T Consensus 32 ~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~-~l~sgs~Dg~v~iw~~~~~~~-~~~~~~ 107 (318)
T 4ggc_A 32 DWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQQKR-LRNMTS 107 (318)
T ss_dssp EECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-EEEEEC
T ss_pred EECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCC-EEEEEECCCcEEEeecCCcee-EEEecC
Confidence 377765 67766 599999999999999888764 3567899999999998 899999999999999998874 677889
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee-eE-eeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc
Q 006743 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS-SC-ITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (633)
Q Consensus 80 H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v-~~-i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~ 157 (633)
|...+.++.+. +..+++++.++.+++|+....... .. ..|...+.++.+.+++++|++++.||.|++||+++.+..
T Consensus 108 h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 185 (318)
T 4ggc_A 108 HSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 185 (318)
T ss_dssp CSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred ccceEEEeecC--CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence 99888876654 789999999999999999876443 33 368999999999999999999999999999999875422
Q ss_pred e-EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 158 L-TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 158 v-~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
. .......|.+.|.++++.|++..++ .+.+++.++.|++||.+...
T Consensus 186 ~~~~~~~~~~~~~v~~~~~~~~~~~~~---------~~~~~~~~~~i~lwd~~~~~ 232 (318)
T 4ggc_A 186 WVPLQTFTQHQGAVKAVAWCPWQSNVL---------ATGGGTSDRHIRIWNVCSGA 232 (318)
T ss_dssp SCCSEEECCCCSCEEEEEECTTSTTEE---------EEEECTTTCEEEEEETTTCC
T ss_pred ccceeeecccCCceEEEEecCCCCcEE---------EEEecCCCCEEEEEeccccc
Confidence 1 1222336888999999999644332 23556778999999986543
No 114
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=3e-20 Score=195.09 Aligned_cols=195 Identities=11% Similarity=0.104 Sum_probs=146.1
Q ss_pred ccCCCCEE-EEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCC------------------------------
Q 006743 2 YNCKDEHL-ASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSR------------------------------ 50 (633)
Q Consensus 2 FSpdG~~L-aSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~------------------------------ 50 (633)
|.++++.+ ++++.|+.|+|||+.+++.+..+. +...|.+++|+++.-
T Consensus 66 ~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~--~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~ 143 (355)
T 3vu4_A 66 MLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK--VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVC 143 (355)
T ss_dssp ECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE--CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEE
T ss_pred EcCCCCEEEEEECCccEEEEEECCCCcEEEEEE--CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceE
Confidence 45667766 467788999999999999888886 345677787776420
Q ss_pred ----eEEEE--EeCCCeEEEEECCCCC---------------ceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCe-EEEE
Q 006743 51 ----HLLVT--AGDDGTLHLWDTTGRS---------------PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKK-LYTY 108 (633)
Q Consensus 51 ----~lLaS--Gs~DGtI~IWDl~t~~---------------~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGt-VrIW 108 (633)
.+++. |+.||.|++||+.+.. +.+..+.+|...|++++|+|++++|++|+.|++ |++|
T Consensus 144 ~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 144 EFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVF 223 (355)
T ss_dssp EEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEE
T ss_pred EEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 12333 5788899999987644 015678899999999999999999999999998 9999
Q ss_pred eCCCCceeeEee---CCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC-ceEEEee------c-------------C
Q 006743 109 DPGSRRPSSCIT---YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ-PLTVLRA------C-------------S 165 (633)
Q Consensus 109 Dlrtgk~v~~i~---h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k-~v~~l~~------~-------------~ 165 (633)
|+++++++..+. |...|.+++|+|++++|++++.|+.|+|||++.... ....+.. + .
T Consensus 224 d~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (355)
T 3vu4_A 224 KTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVD 303 (355)
T ss_dssp ETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCC
T ss_pred ECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccC
Confidence 999999988885 899999999999999999999999999999986421 1111100 0 0
Q ss_pred CCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 166 SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 166 H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+......++|++ ++.+++.++.|+.+++|++..
T Consensus 304 ~~~~~~~~a~~~------------d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 304 KHVRGCKIAWIS------------ESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp TTCCCCEEEESS------------SSEEEEEETTTTEEEEEEEEE
T ss_pred CCCCceEEEEeC------------CCCEEEEEeCCCeEEEEEEEc
Confidence 111224455555 556666667799999998754
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.5e-20 Score=211.28 Aligned_cols=184 Identities=12% Similarity=0.154 Sum_probs=147.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCC----CcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc----
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNE----QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---- 72 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~----~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~---- 72 (633)
+|+|+|++||+++.||.|+|||.+. .+..+. |+. ..|.+++|+|+|+ +|++|+.||+|+|||+.++..
T Consensus 92 awSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~-~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 92 KPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIES-SIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp EECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSS-CEEEEETTSEEEEEECCCCTTTCCC
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCC-EEEEEcCCCEEEEEECCCCcccccc
Confidence 5999999999999999999999543 555555 442 2589999999998 899999999999999988752
Q ss_pred --eeEEe----ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee---eEe--eCCCCeEEEEEecCCCEEEEEE
Q 006743 73 --KVSWL----KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS---SCI--TYEAPFSSLAFIDDDWILTAGT 141 (633)
Q Consensus 73 --~v~~l----~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v---~~i--~h~~~ItsLafSPdG~~LatGs 141 (633)
.+..+ .+|...|.+++|+|++ +++++.|++|++||+..+... ..+ .|...|.+++|+ |.+||+++
T Consensus 168 ~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~ 243 (588)
T 2j04_A 168 FYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC 243 (588)
T ss_dssp CEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC
T ss_pred ceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe
Confidence 34555 6788899999999999 889999999999999887742 344 477899999999 68898887
Q ss_pred cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEE--ccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 142 SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCW--QRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 142 ~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLaf--sPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
++.|++||+.+... ..+. .+|...|..++| +|++..++ .+..||+ ++|...
T Consensus 244 -~~tIkLWd~~~~~~--~~~~-~gh~~~V~~va~~~s~d~~~La------------~a~edG~-klw~~d 296 (588)
T 2j04_A 244 -PGYVHKIDLKNYSI--SSLK-TGSLENFHIIPLNHEKESTILL------------MSNKTSY-KVLLED 296 (588)
T ss_dssp -SSEEEEEETTTTEE--EEEE-CSCCSCCCEEEETTCSSCEEEE------------ECSSCEE-EEEESS
T ss_pred -CCeEEEEECCCCeE--EEEE-cCCCceEEEEEeeeCCCCCEEE------------EEcCCCC-EEEeec
Confidence 69999999998631 1222 379999999999 88654444 4455777 777654
No 116
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.86 E-value=2.2e-20 Score=187.47 Aligned_cols=121 Identities=16% Similarity=0.259 Sum_probs=105.7
Q ss_pred CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc---eeEEeccCCCCeEEEEEcC--CCCEEEEEeCCCeEEEE
Q 006743 34 DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---KVSWLKQHSAPTAGISFSS--DDKIIASVGLDKKLYTY 108 (633)
Q Consensus 34 ~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~---~v~~l~~H~~~VtsLafSP--dg~~LaSgS~DGtVrIW 108 (633)
..|...|.+++|+|+++ +|++|+.||.|+|||+.+... ....+.+|...|.+++|+| ++++|++++.|+.|++|
T Consensus 8 ~gH~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGR-HVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp CCCSSCEEEEEECSSSS-EEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred cccccceeEEEEcCCCC-EEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 34788899999999998 899999999999999986542 3556778999999999999 69999999999999999
Q ss_pred eCCCC---------ceeeEe-eCCCCeEEEEEecC--CCEEEEEEcCCeEEEEECCCCC
Q 006743 109 DPGSR---------RPSSCI-TYEAPFSSLAFIDD--DWILTAGTSNGRVVFYDIRGKP 155 (633)
Q Consensus 109 Dlrtg---------k~v~~i-~h~~~ItsLafSPd--G~~LatGs~DGsV~IWDlrs~~ 155 (633)
|++++ +.+..+ .|...|.+++|+|+ +.+|++++.||.|++||+++..
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 99886 334444 58899999999999 9999999999999999998653
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.85 E-value=1e-19 Score=189.83 Aligned_cols=195 Identities=14% Similarity=0.115 Sum_probs=156.9
Q ss_pred CccCCCCEE-EEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 1 MYNCKDEHL-ASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 1 AFSpdG~~L-aSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
+|+|+|++| ++++.|+.|++||+.+++.+..+..+. .+.+++|+|+++.+++++..|+.|++||+.+++. +..+.
T Consensus 38 ~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~-~~~~~- 113 (391)
T 1l0q_A 38 VISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS--SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV-AGTVK- 113 (391)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEE-
T ss_pred EECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC--CccceEECCCCCEEEEEECCCCEEEEEECCCCeE-EEEEe-
Confidence 489999987 566689999999999999988887533 7889999999986556777889999999998774 34444
Q ss_pred CCCCeEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEE-EEEEcCCeEEEEECCCCCCc
Q 006743 80 HSAPTAGISFSSDDKII-ASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWIL-TAGTSNGRVVFYDIRGKPQP 157 (633)
Q Consensus 80 H~~~VtsLafSPdg~~L-aSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~L-atGs~DGsV~IWDlrs~~k~ 157 (633)
+...+.+++|+|++++| ++++.|+.|++||+++++.+..+.....+.+++|+|++++| +++..|+.|++||+++. +.
T Consensus 114 ~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~-~~ 192 (391)
T 1l0q_A 114 TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN-SV 192 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-EE
T ss_pred CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-eE
Confidence 44678999999999977 68888999999999999988888777888999999999988 56778899999999987 33
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 158 v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
...+ .+...+.+++|+|++++++.+.. ...++.|++||+....
T Consensus 193 ~~~~---~~~~~~~~~~~~~~g~~l~~~~~---------~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 193 IDTV---KVEAAPSGIAVNPEGTKAYVTNV---------DKYFNTVSMIDTGTNK 235 (391)
T ss_dssp EEEE---ECSSEEEEEEECTTSSEEEEEEE---------CSSCCEEEEEETTTTE
T ss_pred EEEE---ecCCCccceEECCCCCEEEEEec---------CcCCCcEEEEECCCCe
Confidence 3333 36678999999997666554411 0158899999987543
No 118
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.85 E-value=4.2e-20 Score=188.47 Aligned_cols=134 Identities=14% Similarity=0.259 Sum_probs=116.5
Q ss_pred EECCCCceeEEEeCCCCCcEEEEEEccCC--CeEEEEEeCCCeEEEEECCC-CCceeEEeccCCCCeEEEEEcCCCCEEE
Q 006743 21 HNLASGAKAAELKDPNEQVLRVLDYSRNS--RHLLVTAGDDGTLHLWDTTG-RSPKVSWLKQHSAPTAGISFSSDDKIIA 97 (633)
Q Consensus 21 WDl~tgk~v~~~~~~~~~~VssLafSpdg--~~lLaSGs~DGtI~IWDl~t-~~~~v~~l~~H~~~VtsLafSPdg~~La 97 (633)
|+....+.+..+.+ |...|.+++|+|++ ..+|++|+.||.|+|||+.+ .......+..|...|++++|+|++++|+
T Consensus 24 ~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 24 DNHNPMKDIEVTSS-PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CSSCTTCCEECSSC-CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred CCCCCcceeEeccC-CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 34444555555554 77889999999995 34899999999999999987 4444477889999999999999999999
Q ss_pred EEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEE--ecCCCEEEEEEcCCeEEEEECCCCC
Q 006743 98 SVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAF--IDDDWILTAGTSNGRVVFYDIRGKP 155 (633)
Q Consensus 98 SgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLaf--SPdG~~LatGs~DGsV~IWDlrs~~ 155 (633)
+++.|+.|++||+++++.+....|...|.+++| ++++.+|++++.||.|++||+++..
T Consensus 103 s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred EEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 999999999999999998888899999999999 8899999999999999999998753
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.4e-20 Score=211.45 Aligned_cols=185 Identities=11% Similarity=0.058 Sum_probs=144.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-----------------------------eeEEEeCCCCCcEEEEEEccCCCe
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGA-----------------------------KAAELKDPNEQVLRVLDYSRNSRH 51 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk-----------------------------~v~~~~~~~~~~VssLafSpdg~~ 51 (633)
+|+|||+++|+++.|++|+ |...++ ....+...+...|.+++|+|+|.
T Consensus 22 ~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~- 98 (588)
T 2j04_A 22 TWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDD- 98 (588)
T ss_dssp EECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSS-
T ss_pred EECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCC-
Confidence 5899999999999999995 433322 11122212367799999999998
Q ss_pred EEEEEeCCCeEEEEECCCCCceeEEeccCCC-----CeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-------eeEe
Q 006743 52 LLVTAGDDGTLHLWDTTGRSPKVSWLKQHSA-----PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP-------SSCI 119 (633)
Q Consensus 52 lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~-----~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~-------v~~i 119 (633)
+|++++.||.|+|||..+ .+..+. |.. .|.+++|+|||++|++|+.||+|++||+.++.. +..+
T Consensus 99 ~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti 174 (588)
T 2j04_A 99 WMAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSI 174 (588)
T ss_dssp CEEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEE
T ss_pred EEEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeee
Confidence 899999999999999654 345556 665 499999999999999999999999999998753 3443
Q ss_pred -----eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC--ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCe
Q 006743 120 -----TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ--PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAET 192 (633)
Q Consensus 120 -----~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k--~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~ 192 (633)
+|...|.+++|+||| +++++.|+.|++||+.+... ....+. .+|...|.+++|+ +++|++
T Consensus 175 ~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~-~~h~~~V~svaFs--g~~LAS-------- 241 (588)
T 2j04_A 175 RLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ-NASRRKITDLKIV--DYKVVL-------- 241 (588)
T ss_dssp ECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE-CCCSSCCCCEEEE--TTEEEE--------
T ss_pred ecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec-ccccCcEEEEEEE--CCEEEE--------
Confidence 366799999999999 88999999999999988752 223342 2688999999997 344443
Q ss_pred EEEEeeCCCeEEccCCCC
Q 006743 193 ALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 193 lLlSgs~Dg~IkIWDlr~ 210 (633)
++ ++.|++||+..
T Consensus 242 ----a~-~~tIkLWd~~~ 254 (588)
T 2j04_A 242 ----TC-PGYVHKIDLKN 254 (588)
T ss_dssp ----EC-SSEEEEEETTT
T ss_pred ----Ee-CCeEEEEECCC
Confidence 34 68999999854
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.84 E-value=7.3e-20 Score=193.60 Aligned_cols=204 Identities=11% Similarity=0.069 Sum_probs=166.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|+++++++++++.|+.|++||+.+++.+..+.. +...+.+++|+|+++.+++++..|+.|++||+.+.+. +..+..
T Consensus 176 ~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~- 252 (433)
T 3bws_A 176 SIPEHNELWVSQMQANAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE-IRKTDK- 252 (433)
T ss_dssp EEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE-EEECCC-
T ss_pred EEcCCCEEEEEECCCCEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE-EEEecC-
Confidence 3678899999999999999999999998888874 5667889999999985556777899999999987763 444444
Q ss_pred CCCeEEEEEcCCCCEEEEEe--------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEE-EEEEcCCeEEEEEC
Q 006743 81 SAPTAGISFSSDDKIIASVG--------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWIL-TAGTSNGRVVFYDI 151 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS--------~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~L-atGs~DGsV~IWDl 151 (633)
...+.+++|+|++++|++++ .|+.|++||+++++.+..+.+...+.+++|+|+++++ ++++.|+.|++||+
T Consensus 253 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 253 IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEET
T ss_pred CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEEC
Confidence 45699999999999999988 5889999999999988888777899999999999765 56688999999999
Q ss_pred CCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCC---CeEEEEeeCCCeEEccCCCCC
Q 006743 152 RGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKA---ETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 152 rs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd---~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
++. +....+ .+...+.+++|+|++++++++....+ ..++++++.|+.|++||+...
T Consensus 333 ~~~-~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 333 KEK-KVQKSI---PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp TTT-EEEEEE---ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred CCC-cEEEEe---cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC
Confidence 976 333333 36788999999999998877643322 345667777999999998643
No 121
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.84 E-value=4.7e-20 Score=194.82 Aligned_cols=152 Identities=8% Similarity=0.066 Sum_probs=129.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEE-EeCCCCCcEEEEEEccCCCeEEEEEeCCC----eEEEEECCCCCce--
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDG----TLHLWDTTGRSPK-- 73 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~-~~~~~~~~VssLafSpdg~~lLaSGs~DG----tI~IWDl~t~~~~-- 73 (633)
+|+|||++|++++. +.+++|+..+++.+.. ....|...|.+++|+|++. ++++++.|+ .+++||+......
T Consensus 183 ~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~ 260 (365)
T 4h5i_A 183 HFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVL 260 (365)
T ss_dssp EECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEE
T ss_pred EEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccccceecce
Confidence 58999999999985 4577777777776544 3345778899999999997 788888777 6888998665432
Q ss_pred -eEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEecCCCEEEEEEcCCeEEEEE
Q 006743 74 -VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYD 150 (633)
Q Consensus 74 -v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i--~h~~~ItsLafSPdG~~LatGs~DGsV~IWD 150 (633)
...+.+|...|++++|+|++++||+|+.|++|+|||+++++++..+ .|...|++++|+|||++|++|+.|++|+|||
T Consensus 261 ~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 261 RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 3456789999999999999999999999999999999999988765 5999999999999999999999999999999
Q ss_pred CCCC
Q 006743 151 IRGK 154 (633)
Q Consensus 151 lrs~ 154 (633)
+...
T Consensus 341 ip~~ 344 (365)
T 4h5i_A 341 LPLN 344 (365)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 9754
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.84 E-value=4.8e-19 Score=184.79 Aligned_cols=194 Identities=12% Similarity=0.085 Sum_probs=157.1
Q ss_pred CccCCCCEEEEEE-CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 1 MYNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 1 AFSpdG~~LaSgs-~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
+|+|+|++|++++ .++.|++||+.+++.+..+.. ...+.+++|+|+++.++++++.|+.|++||+.+.+. +..+..
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~ 156 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV-INTVSV 156 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEEC
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE-EEEEec
Confidence 4899999886655 569999999999998888774 345788999999986668888999999999988774 444444
Q ss_pred CCCCeEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEE---cCCeEEEEECCCCC
Q 006743 80 HSAPTAGISFSSDDKII-ASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT---SNGRVVFYDIRGKP 155 (633)
Q Consensus 80 H~~~VtsLafSPdg~~L-aSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs---~DGsV~IWDlrs~~ 155 (633)
| ..+.+++|+|++++| ++++.|+.|++||+++++.+..+.+...+.+++|+|++++|++++ .++.|++||+++.
T Consensus 157 ~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~- 234 (391)
T 1l0q_A 157 G-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN- 234 (391)
T ss_dssp C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT-
T ss_pred C-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC-
Confidence 4 567999999999887 677889999999999999888888888999999999999999888 6899999999987
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 156 k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
+++..+. . ...+.+++|+|+++++ +++++.|+.|++||+.....
T Consensus 235 ~~~~~~~--~-~~~~~~~~~s~dg~~l-----------~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 235 KITARIP--V-GPDPAGIAVTPDGKKV-----------YVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp EEEEEEE--C-CSSEEEEEECTTSSEE-----------EEEETTTTEEEEEETTTTEE
T ss_pred eEEEEEe--c-CCCccEEEEccCCCEE-----------EEEcCCCCEEEEEECCCCcE
Confidence 3444444 3 3458899999975544 34556799999999976443
No 123
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.84 E-value=3.8e-19 Score=190.39 Aligned_cols=184 Identities=16% Similarity=0.212 Sum_probs=154.3
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCe
Q 006743 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPT 84 (633)
Q Consensus 5 dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~V 84 (633)
++++|++|+.||.|++||+.+++.+..+.+ |...|.+++| ++. ++++|+.||.|++||+.+.+. +..+..|...+
T Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~--~~~-~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~v 322 (445)
T 2ovr_B 248 DGRRVVSGAYDFMVKVWDPETETCLHTLQG-HTNRVYSLQF--DGI-HVVSGSLDTSIRVWDVETGNC-IHTLTGHQSLT 322 (445)
T ss_dssp CSSCEEEEETTSCEEEEEGGGTEEEEEECC-CSSCEEEEEE--CSS-EEEEEETTSCEEEEETTTCCE-EEEECCCCSCE
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEecC-CCCceEEEEE--CCC-EEEEEeCCCeEEEEECCCCCE-EEEEcCCcccE
Confidence 688899999999999999999988888876 5667888888 555 899999999999999998874 67788999999
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee----CCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 006743 85 AGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (633)
Q Consensus 85 tsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~----h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~ 160 (633)
.++.++ +++|++++.||.|++||+++++.+..+. |...|.+++|+ +.+|++|+.||.|++||+++++ .+..
T Consensus 323 ~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~-~~~~ 397 (445)
T 2ovr_B 323 SGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE-FIRN 397 (445)
T ss_dssp EEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC-EEEE
T ss_pred EEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCc-eeee
Confidence 998885 7799999999999999999999887774 78889999996 6899999999999999999874 3444
Q ss_pred Ee---ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCe----EEccCCCC
Q 006743 161 LR---ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDS----ILMPDPLP 210 (633)
Q Consensus 161 l~---~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~----IkIWDlr~ 210 (633)
+. ...|.+.|.+++|+|++.+ +++++.|+. |.+||+..
T Consensus 398 ~~~~~~~~~~~~v~~~~~s~~~~~------------la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 398 LVTLESGGSGGVVWRIRASNTKLV------------CAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEECTTGGGTCEEEEEEECSSEEE------------EEEECSSSSSCCEEEEEECCC
T ss_pred eeccccCCCCceEEEEEecCCEEE------------EEEcccCCCCccEEEEEECCC
Confidence 42 1367889999999995544 455566775 99999864
No 124
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.8e-19 Score=213.38 Aligned_cols=171 Identities=10% Similarity=0.105 Sum_probs=142.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee------
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV------ 74 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v------ 74 (633)
+|+| |++|++++.|+.|+|||+.+++.+..+. +...|.+++|+|+++ +|++|+.||.|++||+.+.....
T Consensus 65 ~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~--~~~~V~~v~~sp~g~-~l~sgs~dg~V~lwd~~~~~~~~~~i~~~ 140 (902)
T 2oaj_A 65 RFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF--VPGKITSIDTDASLD-WMLIGLQNGSMIVYDIDRDQLSSFKLDNL 140 (902)
T ss_dssp EEET-TTEEEEEETTCEEEEEETTTCSEEEEEE--CSSCEEEEECCTTCS-EEEEEETTSCEEEEETTTTEEEEEEECCH
T ss_pred EEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc--CCCCEEEEEECCCCC-EEEEEcCCCcEEEEECCCCccccceeccc
Confidence 4888 8899999999999999999999988886 446789999999998 89999999999999998776321
Q ss_pred ----EEeccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeEee-C------------------CCCeEEEEE
Q 006743 75 ----SWLKQHSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCIT-Y------------------EAPFSSLAF 130 (633)
Q Consensus 75 ----~~l~~H~~~VtsLafSPd-g~~LaSgS~DGtVrIWDlrtgk~v~~i~-h------------------~~~ItsLaf 130 (633)
..+.+|...|++++|+|+ +..|++|+.|+.| +||+++++++..+. | ...|.+++|
T Consensus 141 ~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~f 219 (902)
T 2oaj_A 141 QKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY 219 (902)
T ss_dssp HHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE
T ss_pred cccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEE
Confidence 124679999999999994 6789999999999 99999998877664 2 367999999
Q ss_pred ecCCCEEEEEEcCCeEEEEECCCCCCceEEEee-----c-----------CCCCCeeEEEEcc
Q 006743 131 IDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRA-----C-----------SSSEAVSSLCWQR 177 (633)
Q Consensus 131 SPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~-----~-----------~H~~~VtsLafsP 177 (633)
+|+|.+|++|+.||.|++||+++++ ++..... . .|...|++++|++
T Consensus 220 spdg~~lasgs~Dg~i~lWd~~~g~-~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~ 281 (902)
T 2oaj_A 220 HPNSLHIITIHEDNSLVFWDANSGH-MIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMC 281 (902)
T ss_dssp CTTSSEEEEEETTCCEEEEETTTCC-EEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEE
T ss_pred cCCCCEEEEEECCCeEEEEECCCCc-EEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEe
Confidence 9999999999999999999999863 3332111 0 1356799999975
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.83 E-value=3.9e-19 Score=188.02 Aligned_cols=193 Identities=8% Similarity=0.052 Sum_probs=158.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeC----CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD----PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~----~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~ 76 (633)
+|+|++.++++++.++.|++||+.+++.+..+.. .|...|.+++|++++. ++++++.|+.|++||+.+.+. +..
T Consensus 129 ~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~~~~-~~~ 206 (433)
T 3bws_A 129 RFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNE-LWVSQMQANAVHVFDLKTLAY-KAT 206 (433)
T ss_dssp EESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTTCCE-EEE
T ss_pred EEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCE-EEEEECCCCEEEEEECCCceE-EEE
Confidence 4788777777788889999999999988764321 3567889999999886 899999999999999988774 566
Q ss_pred eccCCCCeEEEEEcCCCCEEEE-EeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEE--------cCCeEE
Q 006743 77 LKQHSAPTAGISFSSDDKIIAS-VGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT--------SNGRVV 147 (633)
Q Consensus 77 l~~H~~~VtsLafSPdg~~LaS-gS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs--------~DGsV~ 147 (633)
+..|...+.+++|+|+++++++ ++.|+.|++||+++++.+..+.....+.+++|+|++++|++++ .||.|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~ 286 (433)
T 3bws_A 207 VDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLG 286 (433)
T ss_dssp EECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEE
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEE
Confidence 7788999999999999988854 4589999999999999888887777899999999999999888 588999
Q ss_pred EEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 148 FYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 148 IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+||+++. +.+..+ .|...+.+++|+|+++. ++++++.|+.|++||+..
T Consensus 287 ~~d~~~~-~~~~~~---~~~~~~~~~~~~~~g~~-----------l~~~~~~~~~v~v~d~~~ 334 (433)
T 3bws_A 287 IYSMDKE-KLIDTI---GPPGNKRHIVSGNTENK-----------IYVSDMCCSKIEVYDLKE 334 (433)
T ss_dssp EEETTTT-EEEEEE---EEEECEEEEEECSSTTE-----------EEEEETTTTEEEEEETTT
T ss_pred EEECCCC-cEEeec---cCCCCcceEEECCCCCE-----------EEEEecCCCEEEEEECCC
Confidence 9999977 233333 45668999999997543 445556799999999864
No 126
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.79 E-value=9.3e-19 Score=190.43 Aligned_cols=202 Identities=14% Similarity=0.097 Sum_probs=146.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCC----------ceeEEE----eCCCCCcEEEEEEccCCCeEEE----EEeCCCeE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASG----------AKAAEL----KDPNEQVLRVLDYSRNSRHLLV----TAGDDGTL 62 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tg----------k~v~~~----~~~~~~~VssLafSpdg~~lLa----SGs~DGtI 62 (633)
++++++.++++++.++ |+||+.... ..+... ..++...|.+++|+|+++ +|+ +|+.|+.|
T Consensus 43 avs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~lav~~~sgs~d~~v 120 (434)
T 2oit_A 43 AVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL-TLSACMMSSEYGSII 120 (434)
T ss_dssp EEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC-EEEEEEEETTTEEEE
T ss_pred EEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC-EEEEEEeccCCCceE
Confidence 4678899999999888 889875311 011111 112456799999999998 666 78889999
Q ss_pred EEEECCCC-----Cc-----eeEEeccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeE-eeCCCCeEEEEE
Q 006743 63 HLWDTTGR-----SP-----KVSWLKQHSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSC-ITYEAPFSSLAF 130 (633)
Q Consensus 63 ~IWDl~t~-----~~-----~v~~l~~H~~~VtsLafSPd-g~~LaSgS~DGtVrIWDlrtgk~v~~-i~h~~~ItsLaf 130 (633)
+|||+.+. .. ....+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+.. ..|...|.+++|
T Consensus 121 ~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~w 200 (434)
T 2oit_A 121 AFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCW 200 (434)
T ss_dssp EEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEE
T ss_pred EEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEE
Confidence 99998543 11 13556679999999999996 89999999999999999998865533 357889999999
Q ss_pred ecCCCEEEEEEcCCeEEEEECCCCCCceEEEeec-----CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEc
Q 006743 131 IDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRAC-----SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILM 205 (633)
Q Consensus 131 SPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~-----~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkI 205 (633)
+|+|++|++|+.||.|++||++. .....+... .|...|.+++|++++.++++..... +.. .....+++
T Consensus 201 spdg~~lasgs~dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~d-g~~----~~~~~v~i 273 (434)
T 2oit_A 201 SPKGKQLAVGKQNGTVVQYLPTL--QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAAD-GTL----ETSPDVVM 273 (434)
T ss_dssp CTTSSCEEEEETTSCEEEECTTC--CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETT-CCS----SSCCEEEE
T ss_pred cCCCCEEEEEcCCCcEEEEccCC--cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCC-Ccc----CCCCceEE
Confidence 99999999999999999999983 223333321 2334899999999766664431110 000 11234889
Q ss_pred cCCCCC
Q 006743 206 PDPLPS 211 (633)
Q Consensus 206 WDlr~~ 211 (633)
||++..
T Consensus 274 ~~l~~~ 279 (434)
T 2oit_A 274 ALLPKK 279 (434)
T ss_dssp EECCCT
T ss_pred EEeccC
Confidence 998754
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.78 E-value=2e-17 Score=178.09 Aligned_cols=188 Identities=13% Similarity=0.132 Sum_probs=148.7
Q ss_pred CccCCCCEEEEEECCC---cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCe--EEEEECCCCCceeE
Q 006743 1 MYNCKDEHLASISLSG---DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT--LHLWDTTGRSPKVS 75 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG---~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGt--I~IWDl~t~~~~v~ 75 (633)
+|+|||++|++++.++ .|++||+.+++... +.. +...+.+++|+|+++.++++++.|+. |++||+.+++ ..
T Consensus 185 ~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~~-~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--~~ 260 (415)
T 2hqs_A 185 AWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VAS-FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--IR 260 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EEC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--EE
T ss_pred EEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-eec-CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--EE
Confidence 4899999999999875 99999999887754 443 45678899999999855557776665 9999998876 46
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCC-C--eEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcC---CeEEEE
Q 006743 76 WLKQHSAPTAGISFSSDDKIIASVGLD-K--KLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSN---GRVVFY 149 (633)
Q Consensus 76 ~l~~H~~~VtsLafSPdg~~LaSgS~D-G--tVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~D---GsV~IW 149 (633)
.+..|...+.+++|+|++++|++++.+ + .|++||+.+++......+...+.+++|+|+|++|++++.+ +.|++|
T Consensus 261 ~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 261 QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEE
T ss_pred eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEE
Confidence 678888999999999999999988864 4 7888899988765555567789999999999999988764 589999
Q ss_pred ECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCC---eEEccCCC
Q 006743 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD---SILMPDPL 209 (633)
Q Consensus 150 Dlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg---~IkIWDlr 209 (633)
|+.++.. ..+. .+. .+.+++|+|+|++|+.++ .++ .|++||+.
T Consensus 341 d~~~~~~--~~l~--~~~-~~~~~~~spdg~~l~~~s------------~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 341 DLATGGV--QVLS--STF-LDETPSLAPNGTMVIYSS------------SQGMGSVLNLVSTD 386 (415)
T ss_dssp ETTTCCE--EECC--CSS-SCEEEEECTTSSEEEEEE------------EETTEEEEEEEETT
T ss_pred ECCCCCE--EEec--CCC-CcCCeEEcCCCCEEEEEE------------cCCCccEEEEEECC
Confidence 9998742 2232 343 899999999877766552 233 68888864
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.78 E-value=2.6e-18 Score=182.65 Aligned_cols=147 Identities=12% Similarity=0.116 Sum_probs=116.0
Q ss_pred ccC---CCCEEEEEECCCcEEEEECCCCceeEEEeCCCC--CcEEEEEEccCCCeE-----------EEEEeCCCeEEEE
Q 006743 2 YNC---KDEHLASISLSGDLILHNLASGAKAAELKDPNE--QVLRVLDYSRNSRHL-----------LVTAGDDGTLHLW 65 (633)
Q Consensus 2 FSp---dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~--~~VssLafSpdg~~l-----------LaSGs~DGtI~IW 65 (633)
|++ ++++|++|+.|++|+|||+++++.+..+.+++. ..+.+++|+|++..+ +++|+.|++|++|
T Consensus 186 fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 186 FAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp EEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred eeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 555 668899999999999999999999999986543 467778999998732 3678899999999
Q ss_pred ECCCCCceeEEe-----ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCe-EEEEEecCCCEEE
Q 006743 66 DTTGRSPKVSWL-----KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPF-SSLAFIDDDWILT 138 (633)
Q Consensus 66 Dl~t~~~~v~~l-----~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~-h~~~I-tsLafSPdG~~La 138 (633)
|..+++.. ..+ .+|...+.+..++ +.++++++.|++|+|||+.+++++..+. |...+ .+++|+|||++|+
T Consensus 266 d~~tgk~l-~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La 342 (356)
T 2w18_A 266 NPKTTLSV-GVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL 342 (356)
T ss_dssp ETTTTEEE-EEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE
T ss_pred ECCCCEEE-EEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE
Confidence 99887742 222 3666665555554 8899999999999999999999998884 66554 4689999999999
Q ss_pred EEEcCCeEEEEEC
Q 006743 139 AGTSNGRVVFYDI 151 (633)
Q Consensus 139 tGs~DGsV~IWDl 151 (633)
+|+.|++|+|||+
T Consensus 343 SGS~D~TIklWd~ 355 (356)
T 2w18_A 343 AGQKDGNIFVYHY 355 (356)
T ss_dssp EECTTSCEEEEEE
T ss_pred EEECCCcEEEecC
Confidence 9999999999996
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=5.2e-17 Score=159.68 Aligned_cols=202 Identities=12% Similarity=0.009 Sum_probs=143.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCC-CceeEEEeCCCCCcEEEEEEccCCCeEEEEEe--CCCeEEEE--ECCCCCceeE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLAS-GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG--DDGTLHLW--DTTGRSPKVS 75 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~t-gk~v~~~~~~~~~~VssLafSpdg~~lLaSGs--~DGtI~IW--Dl~t~~~~v~ 75 (633)
+|+|+|++|++++ ++.|++||+.+ ++....+..++...+.+++|+|+++ +|++++ .++.+.|| ++.+.. ..
T Consensus 48 ~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~l~~~~~~~~~--~~ 123 (297)
T 2ojh_A 48 NWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA-LYAISDKVEFGKSAIYLLPSTGGT--PR 123 (297)
T ss_dssp EECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS-EEEEEECTTTSSCEEEEEETTCCC--CE
T ss_pred EECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCC-EEEEEEeCCCCcceEEEEECCCCc--eE
Confidence 4899999999886 88999999998 7776666555556778899999998 677777 33445555 555544 34
Q ss_pred EeccCCCCeEEEEEcCCCCEEE-EEeCCCeEEEEeC--CCCceeeEeeCCCCeEEEEEecCCCEEEEEE-cCCeEEEEEC
Q 006743 76 WLKQHSAPTAGISFSSDDKIIA-SVGLDKKLYTYDP--GSRRPSSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDI 151 (633)
Q Consensus 76 ~l~~H~~~VtsLafSPdg~~La-SgS~DGtVrIWDl--rtgk~v~~i~h~~~ItsLafSPdG~~LatGs-~DGsV~IWDl 151 (633)
.+..+. .+.+++|+|++++|+ ++..|+.+++|++ .+++......+...+.+++|+|++++|++++ .++.++||++
T Consensus 124 ~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~ 202 (297)
T 2ojh_A 124 LMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRV 202 (297)
T ss_dssp ECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEE
Confidence 444443 499999999999877 7788998898885 4555555556788999999999999888766 5899999988
Q ss_pred CCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 152 RGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 152 rs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+........+. .|...+.+++|+|++++|+..+...... ......+..|++||+..
T Consensus 203 ~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~-~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 203 RVDGSSVERIT--DSAYGDWFPHPSPSGDKVVFVSYDADVF-DHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp ETTSSCEEECC--CCSEEEEEEEECTTSSEEEEEEEETTCC-SCCSSEEEEEEEEETTS
T ss_pred CCCCCCcEEEe--cCCcccCCeEECCCCCEEEEEEcCCCCC-cccccCceEEEEEecCC
Confidence 74333344443 5778899999999888776652211100 00000135688898754
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.74 E-value=1.8e-16 Score=170.53 Aligned_cols=187 Identities=13% Similarity=0.095 Sum_probs=144.9
Q ss_pred CCEEEEEECC------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC---eEEEEECCCCCceeEE
Q 006743 6 DEHLASISLS------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG---TLHLWDTTGRSPKVSW 76 (633)
Q Consensus 6 G~~LaSgs~D------G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DG---tI~IWDl~t~~~~v~~ 76 (633)
+..++.++.+ +.|++||+. +.....+.. +...+.+++|+|+++ .|++++.|+ .|++||+.+++. ..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~-~~~~v~~~~~Spdg~-~la~~s~~~~~~~i~~~d~~tg~~--~~ 217 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHR-SPQPLMSPAWSPDGS-KLAYVTFESGRSALVIQTLANGAV--RQ 217 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEE-ESSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTTCCE--EE
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeC-CCCcceeeEEcCCCC-EEEEEEecCCCcEEEEEECCCCcE--EE
Confidence 6677766654 799999986 445566654 556788999999998 788888775 999999998873 45
Q ss_pred eccCCCCeEEEEEcCCCCEEE-EEeCCC--eEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEc-CC--eEEEEE
Q 006743 77 LKQHSAPTAGISFSSDDKIIA-SVGLDK--KLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTS-NG--RVVFYD 150 (633)
Q Consensus 77 l~~H~~~VtsLafSPdg~~La-SgS~DG--tVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~-DG--sV~IWD 150 (633)
+..|...+.+++|+||+++|+ +++.|+ .|++||+++++......+...+.+++|+|||++|++++. ++ .|++||
T Consensus 218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 677888999999999999887 666655 599999999887666678889999999999999998876 44 688889
Q ss_pred CCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 151 IRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 151 lrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+.++. ...+. .+...+.+++|+|+|++|+.++.. ..+..|++||+..
T Consensus 298 ~~~~~--~~~l~--~~~~~~~~~~~spdG~~l~~~~~~---------~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 298 INGGA--PQRIT--WEGSQNQDADVSSDGKFMVMVSSN---------GGQQHIAKQDLAT 344 (415)
T ss_dssp TTSSC--CEECC--CSSSEEEEEEECTTSSEEEEEEEC---------SSCEEEEEEETTT
T ss_pred CCCCC--EEEEe--cCCCcccCeEECCCCCEEEEEECc---------CCceEEEEEECCC
Confidence 88763 22232 466789999999988887765221 1145788898854
No 131
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.73 E-value=7.1e-17 Score=175.57 Aligned_cols=199 Identities=12% Similarity=0.145 Sum_probs=143.4
Q ss_pred CccCCCCEEE----EEECCCcEEEEECCCC--------ceeEEE--eCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEE
Q 006743 1 MYNCKDEHLA----SISLSGDLILHNLASG--------AKAAEL--KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWD 66 (633)
Q Consensus 1 AFSpdG~~La----Sgs~DG~I~IWDl~tg--------k~v~~~--~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWD 66 (633)
+|+++|++|+ +|+.|+.|+|||+.++ +.+..+ ...|...|.+++|+|++.++|++++.||+|+|||
T Consensus 99 ~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD 178 (434)
T 2oit_A 99 ALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQ 178 (434)
T ss_dssp EECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred EEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEE
Confidence 5899999999 7788999999998654 222222 2236778999999998555999999999999999
Q ss_pred CCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee-C-------CCCeEEEEEecCCCEEE
Q 006743 67 TTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-Y-------EAPFSSLAFIDDDWILT 138 (633)
Q Consensus 67 l~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~-h-------~~~ItsLafSPdG~~La 138 (633)
+++... +.....|...|++++|+|++++|++|+.||.|++||++ ++....+. + ...|.+++|++++.+++
T Consensus 179 ~~~~~~-~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~ 256 (434)
T 2oit_A 179 VTETVK-VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAI 256 (434)
T ss_dssp ESSSEE-EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEE
T ss_pred cCCCcc-eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEE
Confidence 988753 44456788999999999999999999999999999998 55444432 2 23799999999887776
Q ss_pred E-EEcCC------eEEEEECCCCCC--ceEEEee--c-----CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCC
Q 006743 139 A-GTSNG------RVVFYDIRGKPQ--PLTVLRA--C-----SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD 201 (633)
Q Consensus 139 t-Gs~DG------sV~IWDlrs~~k--~v~~l~~--~-----~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg 201 (633)
+ ...|| .+++||+++.+. +....+. . +...+...+.+-++.++++.++..+.+.-+++...|+
T Consensus 257 ~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~~~ 335 (434)
T 2oit_A 257 VYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQ 335 (434)
T ss_dssp EEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECTTS
T ss_pred EEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecCCC
Confidence 4 34443 399999986531 2221211 1 2223333444447777777776667777777765544
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.72 E-value=1.5e-15 Score=154.63 Aligned_cols=198 Identities=13% Similarity=0.091 Sum_probs=147.0
Q ss_pred CccCCCCE-EEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 1 MYNCKDEH-LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 1 AFSpdG~~-LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
+|..++++ ++++..++.|.+||+.+++.+..+..+ ...+ .++|+|+++.+++++..++.|++||+.+.+.....+..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLG-YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECC-CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEcc-CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 36666665 566778899999999999988887754 4445 79999999855556666999999999888753555666
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCC---eEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEE-EcCCe-EEEEECCCC
Q 006743 80 HSAPTAGISFSSDDKIIASVGLDK---KLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAG-TSNGR-VVFYDIRGK 154 (633)
Q Consensus 80 H~~~VtsLafSPdg~~LaSgS~DG---tVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatG-s~DGs-V~IWDlrs~ 154 (633)
+..++.+++|+|++++++++..++ .|++||+.+++.+..+.....+.+++|+|+|++|+++ ..++. |++|++...
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 666666699999999999555553 8999999999988888777788999999999866554 55588 999999865
Q ss_pred CCceEE-EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 155 PQPLTV-LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 155 ~k~v~~-l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
...... .........+.+++|+|+|+++ ++++..++.|.+||+...
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l-----------~v~~~~~~~v~v~d~~~~ 208 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFA-----------FVANLIGNSIGILETQNP 208 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEE-----------EEEETTTTEEEEEECSST
T ss_pred CcEeecCCccccCCCCccceEECCCCCEE-----------EEEeCCCCeEEEEECCCC
Confidence 332211 1212345668999999976644 334455889999998643
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.71 E-value=1.9e-16 Score=180.20 Aligned_cols=178 Identities=12% Similarity=0.102 Sum_probs=139.9
Q ss_pred CccCCCCEEEEEEC-CC-----cEEEEECCCCceeEEEeCCCC-----------------------CcEEEEEEccCCCe
Q 006743 1 MYNCKDEHLASISL-SG-----DLILHNLASGAKAAELKDPNE-----------------------QVLRVLDYSRNSRH 51 (633)
Q Consensus 1 AFSpdG~~LaSgs~-DG-----~I~IWDl~tgk~v~~~~~~~~-----------------------~~VssLafSpdg~~ 51 (633)
+|+|||++|++++. |+ .|++||+.+++....+..+.. ..+..++|+|||+
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~- 121 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ- 121 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS-
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC-
Confidence 48999999999998 88 899999999887766643211 2367799999998
Q ss_pred EEEEEeCCCeEEEEECCCC---CceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCC----
Q 006743 52 LLVTAGDDGTLHLWDTTGR---SPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAP---- 124 (633)
Q Consensus 52 lLaSGs~DGtI~IWDl~t~---~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~---- 124 (633)
+|++++. +.|++||+.++ . ...+..|...+.+++|+|||++|+.++. +.|++||+.+++..........
T Consensus 122 ~l~~~~~-~~i~~~d~~~~~~~~--~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~ 197 (741)
T 2ecf_A 122 RLLFPLG-GELYLYDLKQEGKAA--VRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGN 197 (741)
T ss_dssp EEEEEET-TEEEEEESSSCSTTS--CCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEE
T ss_pred EEEEEeC-CcEEEEECCCCCcce--EEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCccceec
Confidence 6777665 99999999887 4 3456778889999999999999999884 5899999998877655432221
Q ss_pred -------------eEEEEEecCCCEEEEEEcCC---------------------------------eEEEEECCC-CCCc
Q 006743 125 -------------FSSLAFIDDDWILTAGTSNG---------------------------------RVVFYDIRG-KPQP 157 (633)
Q Consensus 125 -------------ItsLafSPdG~~LatGs~DG---------------------------------sV~IWDlrs-~~k~ 157 (633)
+.+++|+|||++|++++.|+ .|++||+.+ ++ .
T Consensus 198 g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~-~ 276 (741)
T 2ecf_A 198 GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ-T 276 (741)
T ss_dssp SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC-C
T ss_pred cccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc-e
Confidence 47899999999999988765 799999987 63 3
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006743 158 LTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 158 v~~l~~~~H~~~VtsLafsPdg~~Las~ 185 (633)
........|...+..++| |+|++|+..
T Consensus 277 ~~~~~~~~~~~~~~~~~~-pDg~~l~~~ 303 (741)
T 2ecf_A 277 QWIDLGKEQDIYLARVNW-RDPQHLSFQ 303 (741)
T ss_dssp EEECCCSCSSEEEEEEEE-EETTEEEEE
T ss_pred EEecCCCCcceEEEEEEe-CCCCEEEEE
Confidence 332221247788999999 999988754
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.70 E-value=1.4e-15 Score=155.22 Aligned_cols=196 Identities=10% Similarity=0.068 Sum_probs=152.1
Q ss_pred CccCCCCEEEEEEC-------CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce
Q 006743 1 MYNCKDEHLASISL-------SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK 73 (633)
Q Consensus 1 AFSpdG~~LaSgs~-------DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~ 73 (633)
+|+++|++|++++. ++.|.+||..+++.+..+... ..+..++|+++++.++++...++.|.+||..+++.
T Consensus 47 ~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~- 123 (353)
T 3vgz_A 47 AYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND--LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEV- 123 (353)
T ss_dssp EEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES--SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCE-
T ss_pred EECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC--CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCee-
Confidence 47899999988874 568999999999988887642 33566899999986677777789999999988874
Q ss_pred eEEeccCCCC---------eEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeEee-CCCCeEEEEEecCCCEEEEEE
Q 006743 74 VSWLKQHSAP---------TAGISFSSDDKIIASVG--LDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT 141 (633)
Q Consensus 74 v~~l~~H~~~---------VtsLafSPdg~~LaSgS--~DGtVrIWDlrtgk~v~~i~-h~~~ItsLafSPdG~~LatGs 141 (633)
+..+..+... +.+++|+|+++++++++ .++.|.+||+.+++.+..+. +...+.+++|+|+|++|++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 203 (353)
T 3vgz_A 124 KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTN 203 (353)
T ss_dssp EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEEC
T ss_pred EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEc
Confidence 3444443322 78999999999887776 47899999999999888876 666689999999999999999
Q ss_pred cCCeEEEEECCCCCCceEEEee--cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 142 SNGRVVFYDIRGKPQPLTVLRA--CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 142 ~DGsV~IWDlrs~~k~v~~l~~--~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
.++.|++||+.+.+ ....+.. .++...+.+++|+|++++++. +...++.|.+||+...
T Consensus 204 ~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~-----------~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 204 ADGELITIDTADNK-ILSRKKLLDDGKEHFFINISLDTARQRAFI-----------TDSKAAEVLVVDTRNG 263 (353)
T ss_dssp TTSEEEEEETTTTE-EEEEEECCCSSSCCCEEEEEEETTTTEEEE-----------EESSSSEEEEEETTTC
T ss_pred CCCeEEEEECCCCe-EEEEEEcCCCCCCcccceEEECCCCCEEEE-----------EeCCCCEEEEEECCCC
Confidence 99999999999873 3333332 124556888999997665433 3345688999988543
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.70 E-value=8.4e-16 Score=155.66 Aligned_cols=196 Identities=10% Similarity=0.040 Sum_probs=137.9
Q ss_pred CccCCCCEEEEEECC-CcEEEEECC--CCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC--ce
Q 006743 1 MYNCKDEHLASISLS-GDLILHNLA--SGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS--PK 73 (633)
Q Consensus 1 AFSpdG~~LaSgs~D-G~I~IWDl~--tgk--~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~--~~ 73 (633)
+|+|+|++|++++.+ +.|.+|++. +++ .+..+.. . ..+..++|+|+++.+++++..++.|++||+..+. ..
T Consensus 44 ~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~ 121 (343)
T 1ri6_A 44 VVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL-P-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGV 121 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-S-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEE
T ss_pred EECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc-C-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccc
Confidence 489999999998886 999999997 554 3344543 2 2567799999998544555568999999994221 12
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEeCCC-Cceee----Ee--eCCCCeEEEEEecCCCEEEEEE-cCC
Q 006743 74 VSWLKQHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPGS-RRPSS----CI--TYEAPFSSLAFIDDDWILTAGT-SNG 144 (633)
Q Consensus 74 v~~l~~H~~~VtsLafSPdg~~LaSgS-~DGtVrIWDlrt-gk~v~----~i--~h~~~ItsLafSPdG~~LatGs-~DG 144 (633)
...+. ....+.+++|+|+++++++++ .++.|++||+.+ ++... .. .....+.+++|+|++++|++++ .++
T Consensus 122 ~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 122 VDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp EEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred ccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence 23333 345689999999999888887 899999999987 65432 12 2455788999999999876655 789
Q ss_pred eEEEEECCCCCCc---eEEEeec----CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 145 RVVFYDIRGKPQP---LTVLRAC----SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 145 sV~IWDlrs~~k~---v~~l~~~----~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
.|++||++..... ...+... .....+.+++|+|++++|+ +++..++.|.+||+..
T Consensus 201 ~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~-----------v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 201 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY-----------ACDRTASLITVFSVSE 262 (343)
T ss_dssp EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE-----------EEETTTTEEEEEEECT
T ss_pred EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE-----------EEecCCCEEEEEEEcC
Confidence 9999999642211 1222211 1134567899999765543 3445688999999863
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=4e-16 Score=153.35 Aligned_cols=182 Identities=12% Similarity=0.032 Sum_probs=135.0
Q ss_pred CccCCCCEEEEEEC--CCc--EEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 006743 1 MYNCKDEHLASISL--SGD--LILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (633)
Q Consensus 1 AFSpdG~~LaSgs~--DG~--I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~ 76 (633)
+|+|+|++|++++. ++. |.+|+..+++ ...+.. ...+..++|+|+++.+++++..|+.++||++.........
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK--NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCS--SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeec--CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 48999999999983 344 5555555544 344443 2347889999999966668889999999996433223566
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEeCC-CCceeeEe-eCCCCeEEEEEecCCCEEEEEEcC----------
Q 006743 77 LKQHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPG-SRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSN---------- 143 (633)
Q Consensus 77 l~~H~~~VtsLafSPdg~~LaSgS-~DGtVrIWDlr-tgk~v~~i-~h~~~ItsLafSPdG~~LatGs~D---------- 143 (633)
+..|...+.+++|+|++++|+.++ .++.+++|++. .+.....+ .+...+.+++|+|+|++|++++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 247 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDL 247 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSE
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccC
Confidence 778888999999999999888766 58889999875 33344443 566789999999999999988766
Q ss_pred -CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEec
Q 006743 144 -GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDET 186 (633)
Q Consensus 144 -GsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s 186 (633)
+.|++||+.+.+ ........+|...+.+++|+|++++|+.++
T Consensus 248 ~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 248 DVRVQLMDMDGGN-VETLFDLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp EEEEEEEETTSCS-CEEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred ceEEEEEecCCCC-ceeeeccCCCCcccccceECCCCCEEEEEE
Confidence 569999998763 333333336788999999999888777653
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.69 E-value=5.3e-15 Score=151.02 Aligned_cols=195 Identities=14% Similarity=0.124 Sum_probs=148.0
Q ss_pred CccCCCCEEEEEE-CCCcEEEEECCCCceeEEEeCCCCC--------cEEEEEEccCCCeEEEEE-eCCCeEEEEECCCC
Q 006743 1 MYNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQ--------VLRVLDYSRNSRHLLVTA-GDDGTLHLWDTTGR 70 (633)
Q Consensus 1 AFSpdG~~LaSgs-~DG~I~IWDl~tgk~v~~~~~~~~~--------~VssLafSpdg~~lLaSG-s~DGtI~IWDl~t~ 70 (633)
+|+++|+++++++ .++.|.+||..+++.+..+..+... .+.+++|+|+++.+++++ ..++.|.+||..+.
T Consensus 95 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~ 174 (353)
T 3vgz_A 95 TINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI 174 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT
T ss_pred EECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC
Confidence 4789999666554 5799999999999988888754322 267899999998544444 35889999999887
Q ss_pred CceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee-----CCCCeEEEEEecCCCEEEEEEcC-C
Q 006743 71 SPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-----YEAPFSSLAFIDDDWILTAGTSN-G 144 (633)
Q Consensus 71 ~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~-----h~~~ItsLafSPdG~~LatGs~D-G 144 (633)
+. +..+..+...+.+++|+|+++++++++.++.|.+||+.+++.+..+. +...+.+++|+|++++|++++.+ +
T Consensus 175 ~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 253 (353)
T 3vgz_A 175 KL-KTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA 253 (353)
T ss_dssp EE-EEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSS
T ss_pred ce-EEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCC
Confidence 73 44555466678999999999999999999999999999998877664 35568889999999988777654 9
Q ss_pred eEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 145 RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 145 sV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
.|++||+.+.+ .+..+.. . . ..+++|+|+++++ +++...++.|.+||+....
T Consensus 254 ~v~~~d~~~~~-~~~~~~~--~-~-~~~~~~s~dg~~l-----------~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 254 EVLVVDTRNGN-ILAKVAA--P-E-SLAVLFNPARNEA-----------YVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp EEEEEETTTCC-EEEEEEC--S-S-CCCEEEETTTTEE-----------EEEETTTTEEEEEETTTTE
T ss_pred EEEEEECCCCc-EEEEEEc--C-C-CceEEECCCCCEE-----------EEEECCCCeEEEEECCCCe
Confidence 99999998873 3444442 1 1 2568899875543 3444568899999886443
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.68 E-value=3.2e-15 Score=152.17 Aligned_cols=197 Identities=6% Similarity=0.019 Sum_probs=142.5
Q ss_pred CccCCCCEEEEEECCC---cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCe-EEEEECCCCCcee--
Q 006743 1 MYNCKDEHLASISLSG---DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT-LHLWDTTGRSPKV-- 74 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG---~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGt-I~IWDl~t~~~~v-- 74 (633)
+|+|+|++|+++..++ .|.+||+.+++.+..+.. .....+++|+|+++.++++...++. |.+|++.......
T Consensus 90 ~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~ 167 (331)
T 3u4y_A 90 DITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDT 167 (331)
T ss_dssp EECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEE
T ss_pred EECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeec
Confidence 4889999999555553 899999999988887764 3445789999999867777777788 9999997544321
Q ss_pred -EEeccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCce---eeEeeCCCCeEEEEEecCCCEEEEEE-cCCeEEE
Q 006743 75 -SWLKQHSAPTAGISFSSDDKIIASV-GLDKKLYTYDPGSRRP---SSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVF 148 (633)
Q Consensus 75 -~~l~~H~~~VtsLafSPdg~~LaSg-S~DGtVrIWDlrtgk~---v~~i~h~~~ItsLafSPdG~~LatGs-~DGsV~I 148 (633)
.........+.+++|+|++++++++ ..++.|++||+.+++. +..+.....+..++|+|||++|++++ .++.|.+
T Consensus 168 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~ 247 (331)
T 3u4y_A 168 GQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFN 247 (331)
T ss_dssp EEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEE
T ss_pred CCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEE
Confidence 1122345568999999999966555 4688999999999888 77777778889999999999877665 4788999
Q ss_pred EECCCCCC-ceEEEeec--CCCCC---eeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 149 YDIRGKPQ-PLTVLRAC--SSSEA---VSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 149 WDlrs~~k-~v~~l~~~--~H~~~---VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
||+.+++. .+..+... .+... ..+++|+|++++| ++++..++.|.+||+..
T Consensus 248 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l-----------~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 248 FNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKL-----------FISANISRELKVFTISG 304 (331)
T ss_dssp EETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEE-----------EEEETTTTEEEEEETTS
T ss_pred EECCCCceeeecccccccccCCCCcccccceEECCCCCEE-----------EEecCCCCcEEEEEecC
Confidence 99987632 01111111 11222 2458999975554 33445577999999853
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.68 E-value=5.5e-15 Score=149.27 Aligned_cols=145 Identities=13% Similarity=0.089 Sum_probs=118.5
Q ss_pred CEEEEEECCCcEEEEECCCCceeEEEeCCCCC-cEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-cC----
Q 006743 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQ-VLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-QH---- 80 (633)
Q Consensus 7 ~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~-~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~-~H---- 80 (633)
++|++++.++.|.+||+.+++.+..+...+.. .+..++|+|+++.+++++..++.|.+||+.+.+. +..+. .+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET-LGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE-EEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe-EeeEEcCCcccc
Confidence 57899999999999999999988888743322 3567899999986677777889999999988774 33332 22
Q ss_pred CCCeEEEEEcCCCCEEEEEe------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEE
Q 006743 81 SAPTAGISFSSDDKIIASVG------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS------------~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~I 148 (633)
...+.+++|+|++++|+++. .++.|++||+.+++.+..+.....+.+++|+|+|++|+++ ++.|++
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEE
Confidence 12678899999999998886 5799999999999888777767778899999999988888 688999
Q ss_pred EECCCC
Q 006743 149 YDIRGK 154 (633)
Q Consensus 149 WDlrs~ 154 (633)
||+.+.
T Consensus 159 ~d~~~~ 164 (337)
T 1pby_B 159 MDPEAG 164 (337)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 999876
No 140
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.66 E-value=4.6e-15 Score=150.93 Aligned_cols=151 Identities=11% Similarity=0.050 Sum_probs=117.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-c
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-Q 79 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~-~ 79 (633)
+++++++++++++.++.|++||+.+++.+..+..+....+..++|+|+++.+++++..++.|.+||+.+++. +..+. .
T Consensus 6 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~-~~~~~~~ 84 (349)
T 1jmx_B 6 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN-TFHANLS 84 (349)
T ss_dssp CCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEESC
T ss_pred cccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE-EEEEEcc
Confidence 467888899999999999999999999888887543224567899999985666777899999999988764 33333 2
Q ss_pred C-----CCCeEEEEEcCCCCEEEEEeCC------------CeEEEEeCCCCce---eeEeeCCCCeEEEEEecCCCEEEE
Q 006743 80 H-----SAPTAGISFSSDDKIIASVGLD------------KKLYTYDPGSRRP---SSCITYEAPFSSLAFIDDDWILTA 139 (633)
Q Consensus 80 H-----~~~VtsLafSPdg~~LaSgS~D------------GtVrIWDlrtgk~---v~~i~h~~~ItsLafSPdG~~Lat 139 (633)
+ ...+.+++|+|++++|++++.+ +.|++||+.+++. +....+...+.+++|+|+|+ +++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~ 163 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYV 163 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEE
Confidence 2 2337899999999999999865 8999999988543 33445566789999999999 555
Q ss_pred EEcCCeEEEEECCCCC
Q 006743 140 GTSNGRVVFYDIRGKP 155 (633)
Q Consensus 140 Gs~DGsV~IWDlrs~~ 155 (633)
++ +.|++||+.+.+
T Consensus 164 ~~--~~i~~~d~~~~~ 177 (349)
T 1jmx_B 164 AG--PDIYKMDVKTGK 177 (349)
T ss_dssp ES--SSEEEECTTTCC
T ss_pred cc--CcEEEEeCCCCc
Confidence 54 349999998763
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.66 E-value=2.9e-15 Score=151.69 Aligned_cols=189 Identities=8% Similarity=0.008 Sum_probs=133.3
Q ss_pred CEEEEE-ECCCcEEEEECC-CCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCC-CeEEEEECC--CCCce-eEEec
Q 006743 7 EHLASI-SLSGDLILHNLA-SGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD-GTLHLWDTT--GRSPK-VSWLK 78 (633)
Q Consensus 7 ~~LaSg-s~DG~I~IWDl~-tgk--~v~~~~~~~~~~VssLafSpdg~~lLaSGs~D-GtI~IWDl~--t~~~~-v~~l~ 78 (633)
++++++ +.|+.|++||+. +++ .+..+. +...+.+++|+|+++ +|++++.+ +.|++|++. ++... +..+.
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~spdg~-~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 81 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVD--VPGQVQPMVVSPDKR-YLYVGVRPEFRVLAYRIAPDDGALTFAAESA 81 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSCCCCEEECTTSS-EEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEe--cCCCCceEEECCCCC-EEEEeecCCCeEEEEEecCCCCceeeccccc
Confidence 444444 779999999985 342 333333 445677799999998 56666665 999999997 44422 23333
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEeCC---CCceeeEeeCCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCC
Q 006743 79 QHSAPTAGISFSSDDKIIASVGL-DKKLYTYDPG---SRRPSSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRG 153 (633)
Q Consensus 79 ~H~~~VtsLafSPdg~~LaSgS~-DGtVrIWDlr---tgk~v~~i~h~~~ItsLafSPdG~~LatGs-~DGsV~IWDlrs 153 (633)
.+ ..+.+++|+|++++|++++. ++.|++||+. ..+.+..+.....+.+++|+|++++|++++ .++.|++||+.+
T Consensus 82 ~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 82 LP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp CS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 33 37899999999998877665 8899999994 334455555566799999999999888887 899999999987
Q ss_pred CCCceEEE--e-ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 154 KPQPLTVL--R-ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 154 ~~k~v~~l--~-~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
..+..... . .......+.+++|+|++++++ +++..++.|.+||+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~-----------~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY-----------CVNELNSSVDVWELKD 209 (343)
T ss_dssp TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE-----------EEETTTTEEEEEESSC
T ss_pred CCceeeecccccccCCCCCcceEEECCCCCEEE-----------EEeCCCCEEEEEEecC
Confidence 32322211 1 112345788999999765543 3344688999999854
No 142
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.66 E-value=6.6e-15 Score=164.88 Aligned_cols=195 Identities=12% Similarity=0.169 Sum_probs=153.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC--CCCCceeEEec
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT--TGRSPKVSWLK 78 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl--~t~~~~v~~l~ 78 (633)
+|+|++..++++..|+.|.+||..+++.+..+..++. +..++|+|+++ +|++++.|+.|.+||+ .+.+. +..+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~-~l~v~~~d~~V~v~D~~~~t~~~-~~~i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGR-YLLVIGRDARIDMIDLWAKEPTK-VAEIK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSC-EEEEEETTSEEEEEETTSSSCEE-EEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCC-EEEEECCCCeEEEEECcCCCCcE-EEEEe
Confidence 4788888899999999999999999999999985443 78899999998 7889999999999999 66553 44555
Q ss_pred cCCCCeEEEEEcC----CCCEEEEEeC-CCeEEEEeCCCCceeeEeeC------------CCCeEEEEEecCCCE-EEEE
Q 006743 79 QHSAPTAGISFSS----DDKIIASVGL-DKKLYTYDPGSRRPSSCITY------------EAPFSSLAFIDDDWI-LTAG 140 (633)
Q Consensus 79 ~H~~~VtsLafSP----dg~~LaSgS~-DGtVrIWDlrtgk~v~~i~h------------~~~ItsLafSPdG~~-LatG 140 (633)
+...+..++|+| +++++++++. +++|.+||..+++++..+.. ...+.++.++|++.. +++.
T Consensus 220 -~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 220 -IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp -CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred -cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 456789999999 9999999884 89999999999998877642 237899999997655 5566
Q ss_pred EcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 141 TSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 141 s~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
..++.|.+||+.+.+.. ... ...+...+..++|+|+|+++++ ++..++.|.+||+.....
T Consensus 299 ~~~g~i~vvd~~~~~~l-~~~-~i~~~~~~~~~~~spdg~~l~v-----------a~~~~~~v~v~D~~tg~l 358 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNL-TVT-SIGAAPFLHDGGWDSSHRYFMT-----------AANNSNKVAVIDSKDRRL 358 (543)
T ss_dssp TTTTEEEEEECTTSSSC-EEE-EEECCSSCCCEEECTTSCEEEE-----------EEGGGTEEEEEETTTTEE
T ss_pred CCCCeEEEEEecCCCcc-eeE-EeccCcCccCceECCCCCEEEE-----------EecCCCeEEEEECCCCeE
Confidence 77899999999876433 211 1235677889999997665533 334578899999875443
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.65 E-value=7e-16 Score=174.76 Aligned_cols=196 Identities=9% Similarity=0.058 Sum_probs=145.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCC--cEEEEEEccCCCeEEEEEeCC---------CeEEEEECCC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQ--VLRVLDYSRNSRHLLVTAGDD---------GTLHLWDTTG 69 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~--~VssLafSpdg~~lLaSGs~D---------GtI~IWDl~t 69 (633)
+|+|||+++++ +.||.|++||+.+++....+..+... .|..++|+|||+ +|++++.+ +.|++||+.+
T Consensus 23 ~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~-~l~~~~~~~~~~~~~~~~~i~~~d~~~ 100 (723)
T 1xfd_A 23 KWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDRE-YALFSYNVEPIYQHSYTGYYVLSKIPH 100 (723)
T ss_dssp CBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSS-EEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred EEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCC-EEEEEecCccceeecceeeEEEEECCC
Confidence 59999997776 78999999999999887777643221 377899999998 67777664 7899999988
Q ss_pred CCceeEEec---cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCC------------------eEE
Q 006743 70 RSPKVSWLK---QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAP------------------FSS 127 (633)
Q Consensus 70 ~~~~v~~l~---~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~-h~~~------------------Its 127 (633)
++. ..+. .|...+..++|+|||++|+.++. +.|++||+.+++...... +... +.+
T Consensus 101 ~~~--~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~ 177 (723)
T 1xfd_A 101 GDP--QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA 177 (723)
T ss_dssp CCC--EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred Cce--EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcce
Confidence 774 3333 34455899999999999999986 789999999988766553 2222 378
Q ss_pred EEEecCCCEEEEEEcCC----------------------------------eEEEEECCCCCCceEEEeec----CCCCC
Q 006743 128 LAFIDDDWILTAGTSNG----------------------------------RVVFYDIRGKPQPLTVLRAC----SSSEA 169 (633)
Q Consensus 128 LafSPdG~~LatGs~DG----------------------------------sV~IWDlrs~~k~v~~l~~~----~H~~~ 169 (633)
++|+|||++|++++.|+ .|++||+.++.. ...+... .+...
T Consensus 178 ~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~-~~~l~~~~~~~~~~~~ 256 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH-DLEMMPPDDPRMREYY 256 (723)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC-CEECCCCCCGGGSSEE
T ss_pred EEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce-eEEeeCCccCCCccce
Confidence 99999999999887653 799999988742 2333311 13677
Q ss_pred eeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 170 VSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 170 VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+.+++|+|||++++..... +..+..|++||+..
T Consensus 257 ~~~~~~SpDg~~l~~~~~~--------~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 257 ITMVKWATSTKVAVTWLNR--------AQNVSILTLCDATT 289 (723)
T ss_dssp EEEEEESSSSEEEEEEEET--------TSCEEEEEEEETTT
T ss_pred eEEEEEeCCCeEEEEEEcC--------CCCeEEEEEEeCCC
Confidence 9999999998877554221 11245678888754
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.63 E-value=3.5e-14 Score=143.29 Aligned_cols=192 Identities=11% Similarity=0.056 Sum_probs=139.2
Q ss_pred CccCCCCEEEEE-ECCCcEEEEECCCCceeEEEeCCCC----CcEEEEEEccCCCeEEEEEe------------CCCeEE
Q 006743 1 MYNCKDEHLASI-SLSGDLILHNLASGAKAAELKDPNE----QVLRVLDYSRNSRHLLVTAG------------DDGTLH 63 (633)
Q Consensus 1 AFSpdG~~LaSg-s~DG~I~IWDl~tgk~v~~~~~~~~----~~VssLafSpdg~~lLaSGs------------~DGtI~ 63 (633)
+|+|+|++++++ ..++.|.+||+.+++.+..+...+. ..+..++|+|+++ +|+++. .++.|.
T Consensus 40 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~i~ 118 (337)
T 1pby_B 40 MVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVA 118 (337)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEE
T ss_pred EEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCC-EEEEEecccccccccccccCceEE
Confidence 478999876554 5578999999999998877764321 1455689999998 566664 579999
Q ss_pred EEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeC----------------------
Q 006743 64 LWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---------------------- 121 (633)
Q Consensus 64 IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h---------------------- 121 (633)
+||+.+.+. +..+. ....+.+++|+|++++|+++ ++.|++||+.+++.+..+..
T Consensus 119 v~d~~~~~~-~~~~~-~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 194 (337)
T 1pby_B 119 LYDAETLSR-RKAFE-APRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHES 194 (337)
T ss_dssp EEETTTTEE-EEEEE-CCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTT
T ss_pred EEECCCCcE-EEEEe-CCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccC
Confidence 999987763 33333 34568899999999988887 67899999987765543311
Q ss_pred ---------------------------------------------CCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC
Q 006743 122 ---------------------------------------------EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (633)
Q Consensus 122 ---------------------------------------------~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k 156 (633)
...+.+++|+|+|++|+++ ++.|++||+.+. +
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~-~ 271 (337)
T 1pby_B 195 SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN-A 271 (337)
T ss_dssp TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT-E
T ss_pred CCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC-c
Confidence 1234568999999999888 799999999876 3
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCCCC
Q 006743 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (633)
Q Consensus 157 ~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~~s 215 (633)
.+..+. ....+.+++|+|+++++++ ++.++.|++||+.......
T Consensus 272 ~~~~~~---~~~~~~~~~~s~dg~~l~~------------~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 272 SIKRVP---LPHSYYSVNVSTDGSTVWL------------GGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp EEEEEE---CSSCCCEEEECTTSCEEEE------------ESBSSEEEEEETTTCCEEE
T ss_pred Ccceec---CCCceeeEEECCCCCEEEE------------EcCCCcEEEEECcCCcEEE
Confidence 333333 3456789999997655443 3458899999987554433
No 145
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.62 E-value=4.2e-14 Score=158.32 Aligned_cols=193 Identities=13% Similarity=0.102 Sum_probs=146.2
Q ss_pred CccCCCCEEEEEECCCcEEEEEC--CCCceeEEEeCCCCCcEEEEEEcc----CCCeEEEEEe-CCCeEEEEECCCCCce
Q 006743 1 MYNCKDEHLASISLSGDLILHNL--ASGAKAAELKDPNEQVLRVLDYSR----NSRHLLVTAG-DDGTLHLWDTTGRSPK 73 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl--~tgk~v~~~~~~~~~~VssLafSp----dg~~lLaSGs-~DGtI~IWDl~t~~~~ 73 (633)
+|+|||++|++++.|+.|.+||+ .+++.+..+.. ...++.++|+| +++ ++++++ .+++|.|||..+.++
T Consensus 185 ~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~--g~~p~~va~sp~~~~dg~-~l~v~~~~~~~v~v~D~~t~~~- 260 (543)
T 1nir_A 185 RMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI--GIEARSVESSKFKGYEDR-YTIAGAYWPPQFAIMDGETLEP- 260 (543)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC--CSEEEEEEECCSTTCTTT-EEEEEEEESSEEEEEETTTCCE-
T ss_pred EECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec--CCCcceEEeCCCcCCCCC-EEEEEEccCCeEEEEecccccc-
Confidence 48999999999999999999999 88888888873 45678899999 998 566655 589999999988774
Q ss_pred eEEecc----------C-CCCeEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceee--EeeCCCCeEEEEEecCCCEEEE
Q 006743 74 VSWLKQ----------H-SAPTAGISFSSDDK-IIASVGLDKKLYTYDPGSRRPSS--CITYEAPFSSLAFIDDDWILTA 139 (633)
Q Consensus 74 v~~l~~----------H-~~~VtsLafSPdg~-~LaSgS~DGtVrIWDlrtgk~v~--~i~h~~~ItsLafSPdG~~Lat 139 (633)
+..+.. | ...+.++.++|++. ++++...++.|.+||+.+.+.+. .+.+...+.+++|+|+|++|++
T Consensus 261 ~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~v 340 (543)
T 1nir_A 261 KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMT 340 (543)
T ss_dssp EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEE
T ss_pred ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEE
Confidence 344432 2 23789999999554 56677789999999998876544 5567778889999999998776
Q ss_pred EE-cCCeEEEEECCCCCCceEEEeec--CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEee-CCCeEEccCCCC
Q 006743 140 GT-SNGRVVFYDIRGKPQPLTVLRAC--SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGA-VGDSILMPDPLP 210 (633)
Q Consensus 140 Gs-~DGsV~IWDlrs~~k~v~~l~~~--~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs-~Dg~IkIWDlr~ 210 (633)
++ .+++|.+||..++ +++..+... .|.+....+ ++|+ ++.+++++. .|++|.+||+.+
T Consensus 341 a~~~~~~v~v~D~~tg-~l~~~i~~g~~ph~g~g~~~-~~p~-----------~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 341 AANNSNKVAVIDSKDR-RLSALVDVGKTPHPGRGANF-VHPK-----------YGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEGGGTEEEEEETTTT-EEEEEEECSSSBCCTTCEEE-EETT-----------TEEEEEEEBSSSSEEEEEECCT
T ss_pred EecCCCeEEEEECCCC-eEEEeeccCCCCCCCCCccc-CCCC-----------CccEEEeccCCCceEEEEEeCC
Confidence 65 5899999999987 444444421 254443333 3553 345556655 589999999876
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.62 E-value=8.1e-14 Score=143.50 Aligned_cols=197 Identities=9% Similarity=0.099 Sum_probs=134.3
Q ss_pred CccCCCCEEEEEE-CCCcEEEEECC-CCc--eeEEEeCC--------CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC
Q 006743 1 MYNCKDEHLASIS-LSGDLILHNLA-SGA--KAAELKDP--------NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT 68 (633)
Q Consensus 1 AFSpdG~~LaSgs-~DG~I~IWDl~-tgk--~v~~~~~~--------~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~ 68 (633)
+|+|+|++|++++ .++.|.+|++. ++. .+..+... ....+.+++|+|+++ ++++...++.|++||+.
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEEC
Confidence 4799999999888 67999999995 333 23333321 112477899999999 88888889999999998
Q ss_pred -CCCce-eEEecc-CCCCeEEEEEcCCCCEEEE-EeCCCeEEEEeCCC--Cceee--Eee-CC------CCeEEEEEecC
Q 006743 69 -GRSPK-VSWLKQ-HSAPTAGISFSSDDKIIAS-VGLDKKLYTYDPGS--RRPSS--CIT-YE------APFSSLAFIDD 133 (633)
Q Consensus 69 -t~~~~-v~~l~~-H~~~VtsLafSPdg~~LaS-gS~DGtVrIWDlrt--gk~v~--~i~-h~------~~ItsLafSPd 133 (633)
++... ...+.. ....+..++|+|+++++++ ...++.|++||+.. ++... .+. .. ..+..++|+||
T Consensus 171 ~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spd 250 (347)
T 3hfq_A 171 DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHD 250 (347)
T ss_dssp TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTT
T ss_pred CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCC
Confidence 44321 111122 2346889999999996665 56788999999874 44322 221 11 45889999999
Q ss_pred CCEEE-EEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 134 DWILT-AGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 134 G~~La-tGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
|++|+ +...++.|.+||+..............+...+.+++|+|+|++|+++ +..++.|.+|++.
T Consensus 251 G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~-----------~~~~~~v~v~~~d 316 (347)
T 3hfq_A 251 GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVV-----------NQNTDNATLYARD 316 (347)
T ss_dssp SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEE-----------ETTTTEEEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEE-----------EcCCCcEEEEEEe
Confidence 99885 55568999999997432211222222456678999999976665443 3345788889553
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.58 E-value=9.6e-14 Score=142.95 Aligned_cols=195 Identities=10% Similarity=0.110 Sum_probs=130.9
Q ss_pred CccCCCCEEEEEEC---CCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEe-CCCeEEEEECCCC-Cce
Q 006743 1 MYNCKDEHLASISL---SGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAG-DDGTLHLWDTTGR-SPK 73 (633)
Q Consensus 1 AFSpdG~~LaSgs~---DG~I~IWDl~tgk--~v~~~~~~~~~~VssLafSpdg~~lLaSGs-~DGtI~IWDl~t~-~~~ 73 (633)
+|+|||+ |++++. ++.|++|++.+++ .+..+.. +...+..++|+|+++ +|++++ .++.|.+||+... ...
T Consensus 46 a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~-~~~~p~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g~~~ 122 (347)
T 3hfq_A 46 ALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA-PGTPPAYVAVDEARQ-LVYSANYHKGTAEVMKIAADGALT 122 (347)
T ss_dssp EECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEE-ESCCCSEEEEETTTT-EEEEEETTTTEEEEEEECTTSCEE
T ss_pred EEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeec-CCCCCEEEEECCCCC-EEEEEeCCCCEEEEEEeCCCCCee
Confidence 4899999 655544 6899999997665 3333322 334556799999998 555555 7899999999632 211
Q ss_pred -eEEecc---------CCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCceeeEe----eCCCCeEEEEEecCCCEEE
Q 006743 74 -VSWLKQ---------HSAPTAGISFSSDDKIIASVGLDKKLYTYDPG-SRRPSSCI----TYEAPFSSLAFIDDDWILT 138 (633)
Q Consensus 74 -v~~l~~---------H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlr-tgk~v~~i----~h~~~ItsLafSPdG~~La 138 (633)
+..+.. +...+.+++|+|+++++++...++.|++||+. +++..... .....+..++|+|||++|+
T Consensus 123 ~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 202 (347)
T 3hfq_A 123 LTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAF 202 (347)
T ss_dssp EEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred ecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEE
Confidence 122211 12358899999999977777778899999998 55443221 2344688999999999776
Q ss_pred E-EEcCCeEEEEECCCCCCce---EEEeecCC----CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 139 A-GTSNGRVVFYDIRGKPQPL---TVLRACSS----SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 139 t-Gs~DGsV~IWDlrs~~k~v---~~l~~~~H----~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
+ +..++.|++|++......+ ..+..... ...+..++|+|+|++|+ ++...++.|.+||+.
T Consensus 203 v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~-----------v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 203 LAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLY-----------VSNRGYNTLAVFAVT 270 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEE-----------EEEETTTEEEEEEEC
T ss_pred EEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEE-----------EEeCCCCEEEEEEEC
Confidence 6 4568899999987521111 12221111 14588999999876653 334457889999885
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.57 E-value=8.2e-14 Score=141.62 Aligned_cols=190 Identities=10% Similarity=0.105 Sum_probs=136.0
Q ss_pred CccCCCCEEEEE-ECCCcEEEEECCCCceeEEEeCCC-----CCcEEEEEEccCCCeEEEEEeCC------------CeE
Q 006743 1 MYNCKDEHLASI-SLSGDLILHNLASGAKAAELKDPN-----EQVLRVLDYSRNSRHLLVTAGDD------------GTL 62 (633)
Q Consensus 1 AFSpdG~~LaSg-s~DG~I~IWDl~tgk~v~~~~~~~-----~~~VssLafSpdg~~lLaSGs~D------------GtI 62 (633)
+|+|+|++++++ ..++.|.+||+.+++.+..+...+ ...+..++|+|+++ +|++++.+ +.|
T Consensus 49 ~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~~~i 127 (349)
T 1jmx_B 49 MMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYVVKPPRL 127 (349)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSS-EEEEEEEEEEECSSCEEECCCEE
T ss_pred EECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCC-EEEEEcccccccccccccCCCeE
Confidence 478999876554 468999999999998887776433 22356789999998 56666654 899
Q ss_pred EEEECCCCCce--eEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCC------------------
Q 006743 63 HLWDTTGRSPK--VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYE------------------ 122 (633)
Q Consensus 63 ~IWDl~t~~~~--v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~------------------ 122 (633)
.+||+.+++.. +... .+...+.+++|+|+++ +++++.+ |++||+.+++.+..+...
T Consensus 128 ~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~-l~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (349)
T 1jmx_B 128 EVFSTADGLEAKPVRTF-PMPRQVYLMRAADDGS-LYVAGPD--IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPH 203 (349)
T ss_dssp EEEEGGGGGGBCCSEEE-ECCSSCCCEEECTTSC-EEEESSS--EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCC
T ss_pred EEEECCCccccceeeec-cCCCcccceeECCCCc-EEEccCc--EEEEeCCCCceeccccccccCCccccCccceeeecC
Confidence 99999764321 2222 3445689999999999 5555444 999999988776554321
Q ss_pred ---------------------------------------------------CCeEEEEEec-CCCEEEEEEcCCeEEEEE
Q 006743 123 ---------------------------------------------------APFSSLAFID-DDWILTAGTSNGRVVFYD 150 (633)
Q Consensus 123 ---------------------------------------------------~~ItsLafSP-dG~~LatGs~DGsV~IWD 150 (633)
..+.+++|+| ++++++++ ++.|++||
T Consensus 204 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d 281 (349)
T 1jmx_B 204 QSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYD 281 (349)
T ss_dssp CCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEE
T ss_pred CCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEE
Confidence 1345677889 99999988 88999999
Q ss_pred CCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 151 IRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 151 lrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
+.+. +.+..+. ....+.+++|+|++++|+. ++.++.|++||+.....
T Consensus 282 ~~~~-~~~~~~~---~~~~~~~~~~s~dg~~l~~------------~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 282 LKQR-KLIKAAN---LDHTYYCVAFDKKGDKLYL------------GGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp TTTT-EEEEEEE---CSSCCCEEEECSSSSCEEE------------ESBSSEEEEEETTTTEE
T ss_pred CccC-eEEEEEc---CCCCccceEECCCCCEEEE------------ecCCCeEEEEeccccce
Confidence 9886 3333333 3455789999997655433 34578999999865443
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.57 E-value=3.2e-14 Score=161.17 Aligned_cols=181 Identities=13% Similarity=0.139 Sum_probs=132.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCC-----CceeEEEeCCCCCc-------------EEEEEEccCCCeEEEEEe-----
Q 006743 1 MYNCKDEHLASISLSGDLILHNLAS-----GAKAAELKDPNEQV-------------LRVLDYSRNSRHLLVTAG----- 57 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~t-----gk~v~~~~~~~~~~-------------VssLafSpdg~~lLaSGs----- 57 (633)
+|+|||++|+.+ .++.|++||+.+ ++.......+.... +.+++|+|||+ +|++++
T Consensus 127 ~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~-~la~~~~d~~~ 204 (706)
T 2z3z_A 127 DFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS-CLAFYRMDQSM 204 (706)
T ss_dssp EECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS-EEEEEEEECTT
T ss_pred cCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC-EEEEEEECCCC
Confidence 489999999985 689999999988 76655444323322 46789999998 666665
Q ss_pred ----------------------------CCCeEEEEECCCCCceeEEe-ccCCCCeEEEEEcCCCCEEEEEeCCC-----
Q 006743 58 ----------------------------DDGTLHLWDTTGRSPKVSWL-KQHSAPTAGISFSSDDKIIASVGLDK----- 103 (633)
Q Consensus 58 ----------------------------~DGtI~IWDl~t~~~~v~~l-~~H~~~VtsLafSPdg~~LaSgS~DG----- 103 (633)
.+..|++||+.+++...... ..|...+.+++|+||+++|++++.|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 284 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNEC 284 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEE
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCee
Confidence 44689999998876321111 25667899999999999999988776
Q ss_pred eEEEEeCCCC-ceeeEe--eCCC---CeEEEEEec--CCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeE-EE
Q 006743 104 KLYTYDPGSR-RPSSCI--TYEA---PFSSLAFID--DDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSS-LC 174 (633)
Q Consensus 104 tVrIWDlrtg-k~v~~i--~h~~---~ItsLafSP--dG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~Vts-La 174 (633)
.|++||+.++ ...... .... .+.+++|+| ||++|+++..||.++||++......+..+. .|...+.+ ++
T Consensus 285 ~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~--~~~~~v~~~~~ 362 (706)
T 2z3z_A 285 KVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT--KGEWEVTNFAG 362 (706)
T ss_dssp EEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC--CSSSCEEEEEE
T ss_pred EEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC--CCCeEEEeeeE
Confidence 8999999998 433333 2222 346789999 999999999999999998763323334443 56667776 79
Q ss_pred EccCCCeEEEe
Q 006743 175 WQRAKPVFIDE 185 (633)
Q Consensus 175 fsPdg~~Las~ 185 (633)
|+|+++.|+..
T Consensus 363 ~spdg~~l~~~ 373 (706)
T 2z3z_A 363 FDPKGTRLYFE 373 (706)
T ss_dssp ECTTSSEEEEE
T ss_pred EcCCCCEEEEE
Confidence 99987766544
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.56 E-value=7.1e-14 Score=166.99 Aligned_cols=175 Identities=10% Similarity=0.174 Sum_probs=143.7
Q ss_pred Ccc-CCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEE-EEECCCCCceeEEec
Q 006743 1 MYN-CKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLH-LWDTTGRSPKVSWLK 78 (633)
Q Consensus 1 AFS-pdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~-IWDl~t~~~~v~~l~ 78 (633)
+|+ |||++|++++ ++.|++|++.+++.. .+..+....+..++|+ +++ .|+.++.++.|. +||+.+.. ...+.
T Consensus 302 ~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~-~l~~~s~~~~l~~~~d~~~~~--~~~l~ 375 (1045)
T 1k32_A 302 DFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKV-AFIHGTREGDFLGIYDYRTGK--AEKFE 375 (1045)
T ss_dssp EEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEE-EEEEEETTEEEEEEEETTTCC--EEECC
T ss_pred eecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCC-eEEEEECCCceEEEEECCCCC--ceEec
Confidence 478 9999999887 889999999877644 3444333378889999 887 677777788899 99998776 34455
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCC----------eEE
Q 006743 79 QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNG----------RVV 147 (633)
Q Consensus 79 ~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DG----------sV~ 147 (633)
.|...+.+++|+||+++|++++.++.|++||+.+++..... .|...+.+++|+|||++|++++.++ .|+
T Consensus 376 ~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~ 455 (1045)
T 1k32_A 376 ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIH 455 (1045)
T ss_dssp CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEE
T ss_pred CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEE
Confidence 78889999999999999999999999999999999887777 6888899999999999999887654 899
Q ss_pred EEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006743 148 FYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 148 IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~ 185 (633)
+||+.++. . .....|...+.+++|+|+|++|+..
T Consensus 456 l~d~~~g~--~--~~l~~~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 456 VYDMEGRK--I--FAATTENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp EEETTTTE--E--EECSCSSSBEEEEEECTTSCEEEEE
T ss_pred EEECCCCc--E--EEeeCCCcccCCceEcCCCCEEEEE
Confidence 99998862 2 3333678889999999987776654
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.56 E-value=5e-14 Score=159.58 Aligned_cols=178 Identities=9% Similarity=0.045 Sum_probs=129.4
Q ss_pred CccCCCCEEEEEECC---------CcEEEEECCCCceeEEEeC--CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Q 006743 1 MYNCKDEHLASISLS---------GDLILHNLASGAKAAELKD--PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG 69 (633)
Q Consensus 1 AFSpdG~~LaSgs~D---------G~I~IWDl~tgk~v~~~~~--~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t 69 (633)
+|+|||++|++++.+ +.|++||+.+++. ..+.. .+...+..++|+|+|+ .|+.++. +.|++||+.+
T Consensus 67 ~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~-~la~~~~-~~i~~~~~~~ 143 (723)
T 1xfd_A 67 EISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQ-QLIFIFE-NNIYYCAHVG 143 (723)
T ss_dssp EECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTT-CEEEEET-TEEEEESSSS
T ss_pred EECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCC-EEEEEEC-CeEEEEECCC
Confidence 489999999999774 7888999988875 33432 1233467789999998 5676665 8999999988
Q ss_pred CCceeEEeccCCCCe------------------EEEEEcCCCCEEEEEeCCC----------------------------
Q 006743 70 RSPKVSWLKQHSAPT------------------AGISFSSDDKIIASVGLDK---------------------------- 103 (633)
Q Consensus 70 ~~~~v~~l~~H~~~V------------------tsLafSPdg~~LaSgS~DG---------------------------- 103 (633)
++. ......+...+ .+++|+|||++|++++.|+
T Consensus 144 g~~-~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 222 (723)
T 1xfd_A 144 KQA-IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAG 222 (723)
T ss_dssp SCC-EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTT
T ss_pred Cce-EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCC
Confidence 764 33334333333 7899999999999988653
Q ss_pred ------eEEEEeCCCCceeeEee-C------CCCeEEEEEecCCCEEEEEEc----CCeEEEEECCCCCCceEEEeecCC
Q 006743 104 ------KLYTYDPGSRRPSSCIT-Y------EAPFSSLAFIDDDWILTAGTS----NGRVVFYDIRGKPQPLTVLRACSS 166 (633)
Q Consensus 104 ------tVrIWDlrtgk~v~~i~-h------~~~ItsLafSPdG~~LatGs~----DGsV~IWDlrs~~k~v~~l~~~~H 166 (633)
.|++||+.+++....+. + ...+..++|+|||++|++... +..|++||+.++. ....+.. .+
T Consensus 223 ~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~-~~ 300 (723)
T 1xfd_A 223 SENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV-CTKKHED-ES 300 (723)
T ss_dssp SCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC-EEEEEEE-EC
T ss_pred CCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc-ceEEEEe-cc
Confidence 79999999887544443 2 567899999999998877654 3579999998874 3333321 23
Q ss_pred CCCee----EEEEccCCCeEEE
Q 006743 167 SEAVS----SLCWQRAKPVFID 184 (633)
Q Consensus 167 ~~~Vt----sLafsPdg~~Las 184 (633)
...+. .++|+|+|+.|+.
T Consensus 301 ~~~~~~~~~~~~~spdg~~l~~ 322 (723)
T 1xfd_A 301 EAWLHRQNEEPVFSKDGRKFFF 322 (723)
T ss_dssp SSCCCCCCCCCEECTTSCSEEE
T ss_pred CCEEeccCCCceEcCCCCeEEE
Confidence 44443 7899998877654
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.55 E-value=8.3e-13 Score=136.93 Aligned_cols=194 Identities=8% Similarity=0.093 Sum_probs=131.3
Q ss_pred CCCEEEEEE-CCCcEEEEECCCCceeEE----Ee--CC-------CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Q 006743 5 KDEHLASIS-LSGDLILHNLASGAKAAE----LK--DP-------NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR 70 (633)
Q Consensus 5 dG~~LaSgs-~DG~I~IWDl~tgk~v~~----~~--~~-------~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~ 70 (633)
+|++|++++ .++.|.+|++.....+.. +. +. +...+.+++|+|+++.+++++..++.|++|++...
T Consensus 108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~ 187 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPN 187 (361)
T ss_dssp CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence 788888776 578999999975433211 11 10 12235779999999855666666899999998754
Q ss_pred Cc------e------eEEeccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceeeE--ee----CCCCeEEEEEe
Q 006743 71 SP------K------VSWLKQHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPGSRRPSSC--IT----YEAPFSSLAFI 131 (633)
Q Consensus 71 ~~------~------v~~l~~H~~~VtsLafSPdg~~LaSgS-~DGtVrIWDlrtgk~v~~--i~----h~~~ItsLafS 131 (633)
.. . ......+...+.+++|+|+++++++++ .++.|++||+.+++.... +. +...+.+++|+
T Consensus 188 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~s 267 (361)
T 3scy_A 188 ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLS 267 (361)
T ss_dssp CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEEC
T ss_pred CCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEEC
Confidence 42 1 122334456789999999999887777 689999999987754322 21 23457899999
Q ss_pred cCCCEEEEEEcC--CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 132 DDDWILTAGTSN--GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 132 PdG~~LatGs~D--GsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
|||++|+++..+ +.|.+|++......+..+........+.+++|+|+|++|+++ +..++.|.+|++.
T Consensus 268 pdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~-----------~~~~~~v~v~~~d 336 (361)
T 3scy_A 268 PDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVA-----------CRDTNVIQIFERD 336 (361)
T ss_dssp TTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEE-----------ETTTTEEEEEEEC
T ss_pred CCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEE-----------ECCCCCEEEEEEE
Confidence 999999777665 899999996321122222222225678899999987665544 2346778886553
No 153
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.55 E-value=3.3e-14 Score=161.78 Aligned_cols=179 Identities=17% Similarity=0.132 Sum_probs=131.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCc---------------EEEEEEccCCCeEEEEEeCCC-----
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQV---------------LRVLDYSRNSRHLLVTAGDDG----- 60 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~---------------VssLafSpdg~~lLaSGs~DG----- 60 (633)
+|+|||++|+.++ ++.|++||+.+++.......+.... +..++|+|||+ +|+.++.|+
T Consensus 158 ~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~ 235 (741)
T 2ecf_A 158 KLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPV 235 (741)
T ss_dssp EECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCE
T ss_pred cCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCce
Confidence 4899999999887 5699999998876654443322211 36689999998 566666554
Q ss_pred ----------------------------eEEEEECCC-CCceeEEec-cCCCCeEEEEEcCCCCEEEEEeC-----CCeE
Q 006743 61 ----------------------------TLHLWDTTG-RSPKVSWLK-QHSAPTAGISFSSDDKIIASVGL-----DKKL 105 (633)
Q Consensus 61 ----------------------------tI~IWDl~t-~~~~v~~l~-~H~~~VtsLafSPdg~~LaSgS~-----DGtV 105 (633)
.|++||+.+ ++....... .|...+.+++| ||+++|++++. +..|
T Consensus 236 ~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i 314 (741)
T 2ecf_A 236 QKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDL 314 (741)
T ss_dssp EEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEE
T ss_pred EecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEE
Confidence 889999988 763222111 47788999999 99999997764 5689
Q ss_pred EEEeCCCCceeeEee-CC-C---CeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEE-EEccCC
Q 006743 106 YTYDPGSRRPSSCIT-YE-A---PFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSL-CWQRAK 179 (633)
Q Consensus 106 rIWDlrtgk~v~~i~-h~-~---~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsL-afsPdg 179 (633)
++||+.+++....+. +. . .+.+++|+|||++++++..||.++||.+..... ...+. .|...|..+ .|+|++
T Consensus 315 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~--~~~~~v~~~~~~s~dg 391 (741)
T 2ecf_A 315 VEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT--HGNWSVDELLAVDEKA 391 (741)
T ss_dssp EEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC--CSSSCEEEEEEEETTT
T ss_pred EEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee--ecceEEEeEeEEeCCC
Confidence 999999998776664 22 2 456899999999999999999888887763323 34443 567778887 599987
Q ss_pred CeEEEe
Q 006743 180 PVFIDE 185 (633)
Q Consensus 180 ~~Las~ 185 (633)
+.|+..
T Consensus 392 ~~l~~~ 397 (741)
T 2ecf_A 392 GLAYFR 397 (741)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 665443
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.55 E-value=4.4e-14 Score=159.99 Aligned_cols=189 Identities=11% Similarity=0.061 Sum_probs=134.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC-----CCceeE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG-----RSPKVS 75 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t-----~~~~v~ 75 (633)
+|+|| ++++.+ .++.|++||+.+++...... +...+..++|+|+|+ .|+.+ .|+.|++||+.+ ++. ..
T Consensus 88 ~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~--~~~~~~~~~~SpdG~-~la~~-~~~~i~v~~~~~~~~~~g~~-~~ 160 (706)
T 2z3z_A 88 LDAGR-GLVVLF-TQGGLVGFDMLARKVTYLFD--TNEETASLDFSPVGD-RVAYV-RNHNLYIARGGKLGEGMSRA-IA 160 (706)
T ss_dssp EETTT-TEEEEE-ETTEEEEEETTTTEEEEEEC--CTTCCTTCEECTTSS-EEEEE-ETTEEEEEECBCTTSCCCCC-EE
T ss_pred EECCC-CeEEEE-ECCEEEEEECCCCceEEccC--CcccccCCcCCCCCC-EEEEE-ECCeEEEEecCcccccCCCc-EE
Confidence 48899 666655 36999999998876654433 344566789999998 56664 679999999987 653 23
Q ss_pred EeccCCCC--------------eEEEEEcCCCCEEEEEe---------------------------------CCCeEEEE
Q 006743 76 WLKQHSAP--------------TAGISFSSDDKIIASVG---------------------------------LDKKLYTY 108 (633)
Q Consensus 76 ~l~~H~~~--------------VtsLafSPdg~~LaSgS---------------------------------~DGtVrIW 108 (633)
....+... +.+++|+||+++|++++ .+..|++|
T Consensus 161 ~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~ 240 (706)
T 2z3z_A 161 VTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIY 240 (706)
T ss_dssp SCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEE
T ss_pred eccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEE
Confidence 23333332 48999999999999997 44689999
Q ss_pred eCCCCceeeEe---eCCCCeEEEEEecCCCEEEEEEcCC-----eEEEEECCCCCCceEEEeecCCCC---CeeEEEEcc
Q 006743 109 DPGSRRPSSCI---TYEAPFSSLAFIDDDWILTAGTSNG-----RVVFYDIRGKPQPLTVLRACSSSE---AVSSLCWQR 177 (633)
Q Consensus 109 Dlrtgk~v~~i---~h~~~ItsLafSPdG~~LatGs~DG-----sV~IWDlrs~~k~v~~l~~~~H~~---~VtsLafsP 177 (633)
|+.+++..... .+...+.+++|+|||++|++++.++ .|++||+.++........ ..+.. .+.+++|+|
T Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~sp 319 (706)
T 2z3z_A 241 HLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV-ETDKHYVEPLHPLTFLP 319 (706)
T ss_dssp ETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE-EECSSCCCCCSCCEECT
T ss_pred ECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE-ccCCCeECccCCceeec
Confidence 99998765544 3556799999999999999988776 899999998733222222 12222 346789998
Q ss_pred --CCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 178 --AKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 178 --dg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
+|++++++ ..|+.+++|++.
T Consensus 320 ~~dg~~l~~~------------~~~g~~~l~~~~ 341 (706)
T 2z3z_A 320 GSNNQFIWQS------------RRDGWNHLYLYD 341 (706)
T ss_dssp TCSSEEEEEE------------CTTSSCEEEEEE
T ss_pred CCCCEEEEEE------------ccCCccEEEEEE
Confidence 76655443 445556666543
No 155
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.53 E-value=7.9e-14 Score=160.54 Aligned_cols=196 Identities=11% Similarity=0.077 Sum_probs=140.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCc----EEEEEEccCCCeEEEEEeCC---------CeEEEEEC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQV----LRVLDYSRNSRHLLVTAGDD---------GTLHLWDT 67 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~----VssLafSpdg~~lLaSGs~D---------GtI~IWDl 67 (633)
+|++||++|+++ ||.|++||+.+++....+.++.... ...+.|+|||+ +|+.++.+ +.+++||+
T Consensus 23 ~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~-~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 23 RWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQ-FILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp EECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEET
T ss_pred EECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCC-EEEEEECCeeeEEEccceEEEEEEC
Confidence 489999988886 9999999999999877777654322 23378999998 66776665 56779999
Q ss_pred CCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee--CCCCe-----------------EEE
Q 006743 68 TGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT--YEAPF-----------------SSL 128 (633)
Q Consensus 68 ~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~--h~~~I-----------------tsL 128 (633)
.+++ ...+..|...+..++|+|||+.|+.+. |+.|++||+.+++..+... +...+ ..+
T Consensus 100 ~~~~--~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~ 176 (740)
T 4a5s_A 100 NKRQ--LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSAL 176 (740)
T ss_dssp TTTE--ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred CCCc--EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcce
Confidence 9887 345677888999999999999999985 6899999999887655432 22222 358
Q ss_pred EEecCCCEEEEEEcCC------------------------------------eEEEEECCC---CCC-ceEEEeec----
Q 006743 129 AFIDDDWILTAGTSNG------------------------------------RVVFYDIRG---KPQ-PLTVLRAC---- 164 (633)
Q Consensus 129 afSPdG~~LatGs~DG------------------------------------sV~IWDlrs---~~k-~v~~l~~~---- 164 (633)
.|+|||++|+.+..|. .|++||+.+ +.. ....+...
T Consensus 177 ~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~ 256 (740)
T 4a5s_A 177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASML 256 (740)
T ss_dssp EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHH
T ss_pred EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCC
Confidence 9999999999875321 588899987 521 12223211
Q ss_pred CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 165 SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 165 ~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+|...+..++|+|||+.++..... ...+..|++||+..
T Consensus 257 ~~~~~~~~~~wspdg~~~~~~~~r--------~~~~~~i~~~d~~t 294 (740)
T 4a5s_A 257 IGDHYLCDVTWATQERISLQWLRR--------IQNYSVMDICDYDE 294 (740)
T ss_dssp TSCEEEEEEEEEETTEEEEEEEES--------STTEEEEEEEEEET
T ss_pred CCCeEEEEEEEeCCCeEEEEEeCC--------CCCEEEEEEEECCC
Confidence 377889999999998865543221 11234577777644
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.53 E-value=1.3e-12 Score=135.49 Aligned_cols=196 Identities=8% Similarity=0.064 Sum_probs=130.5
Q ss_pred CccCCCCEEEEEECC----CcEEEEECCC--Cce--eEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc
Q 006743 1 MYNCKDEHLASISLS----GDLILHNLAS--GAK--AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (633)
Q Consensus 1 AFSpdG~~LaSgs~D----G~I~IWDl~t--gk~--v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~ 72 (633)
+|+|||++|++++.+ +.|.+|++.. ++. +..+.. +......+++ +++.++++...++.|.+|++.....
T Consensus 56 ~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~-~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~ 132 (361)
T 3scy_A 56 IPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKT-MGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGA 132 (361)
T ss_dssp EECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEEC-SSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSC
T ss_pred EECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEecc-CCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCc
Confidence 589999999999876 7999998865 432 233332 3334555777 7774555555789999999965432
Q ss_pred e---eEE--ec--------cCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCc-------e-------eeEeeCCCC
Q 006743 73 K---VSW--LK--------QHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPGSRR-------P-------SSCITYEAP 124 (633)
Q Consensus 73 ~---v~~--l~--------~H~~~VtsLafSPdg~~LaSgS-~DGtVrIWDlrtgk-------~-------v~~i~h~~~ 124 (633)
. ... .. .+...+.+++|+|+++++++++ .++.|++|++.... . .........
T Consensus 133 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 212 (361)
T 3scy_A 133 LLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSG 212 (361)
T ss_dssp BCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCC
T ss_pred CcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCC
Confidence 1 111 11 1233468899999999776655 57899999887533 1 112245667
Q ss_pred eEEEEEecCCCEEEEEE-cCCeEEEEECCCCCC-ceEEEe-ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeC-C
Q 006743 125 FSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQ-PLTVLR-ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAV-G 200 (633)
Q Consensus 125 ItsLafSPdG~~LatGs-~DGsV~IWDlrs~~k-~v~~l~-~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~-D 200 (633)
+..++|+|||++|++++ .++.|++||+.++.. .+..+. ...+...+.+++|+|+|++|+.. ... +
T Consensus 213 ~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~-----------~~~~~ 281 (361)
T 3scy_A 213 PRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYAS-----------NRLKA 281 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEE-----------ECSSS
T ss_pred CeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEE-----------CCCCC
Confidence 88999999999888877 689999999985421 111122 12334557899999987766433 333 5
Q ss_pred CeEEccCCCC
Q 006743 201 DSILMPDPLP 210 (633)
Q Consensus 201 g~IkIWDlr~ 210 (633)
+.|.+|++.+
T Consensus 282 ~~i~v~~~~~ 291 (361)
T 3scy_A 282 DGVAIFKVDE 291 (361)
T ss_dssp CEEEEEEECT
T ss_pred CEEEEEEEcC
Confidence 7899998853
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.53 E-value=7.8e-14 Score=154.99 Aligned_cols=184 Identities=16% Similarity=0.123 Sum_probs=134.7
Q ss_pred CccCCCCEEEEEEC---CCcEEEEECCC---CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 006743 1 MYNCKDEHLASISL---SGDLILHNLAS---GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (633)
Q Consensus 1 AFSpdG~~LaSgs~---DG~I~IWDl~t---gk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v 74 (633)
+|+|| +.++++.. +....||.+.. +... .+... ..+...+|+|+++.++++...++.+.|||+.+++.
T Consensus 71 ~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~--~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~-- 144 (582)
T 3o4h_A 71 HYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV--KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL-- 144 (582)
T ss_dssp CTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS--CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE--
T ss_pred cCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC--CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE--
Confidence 58888 77777765 45455654432 3222 44322 23446789999876666666666666999988763
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCC--eEEE
Q 006743 75 SWLKQHSAPTAGISFSSDDKIIASVGLD----KKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNG--RVVF 148 (633)
Q Consensus 75 ~~l~~H~~~VtsLafSPdg~~LaSgS~D----GtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DG--sV~I 148 (633)
..+..+.. .+++|+|||++|++++.| +.|++||+.+++......+.+.+..++|+|||++|+++..++ .|++
T Consensus 145 ~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~ 222 (582)
T 3o4h_A 145 RELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVT 222 (582)
T ss_dssp EEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEE
T ss_pred EEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEE
Confidence 33333333 889999999999988877 789999999988876667888899999999999999888888 8999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEE--------EccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 149 YDIRGKPQPLTVLRACSSSEAVSSLC--------WQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 149 WDlrs~~k~v~~l~~~~H~~~VtsLa--------fsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
||+.++.. . .+ ..|...+..++ |+|+| .+++++..|+.+++|++
T Consensus 223 ~d~~~~~~-~-~~--~~~~~~~~~~~~~~~~~~~~spdg------------~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 223 VDPRDGSV-E-DL--ELPSKDFSSYRPTAITWLGYLPDG------------RLAVVARREGRSAVFID 274 (582)
T ss_dssp ECTTTCCE-E-EC--CCSCSHHHHHCCSEEEEEEECTTS------------CEEEEEEETTEEEEEET
T ss_pred EcCCCCcE-E-Ec--cCCCcChhhhhhccccceeEcCCC------------cEEEEEEcCCcEEEEEE
Confidence 99988742 2 33 36667777777 99864 44555567899999998
No 158
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.52 E-value=1.1e-13 Score=165.31 Aligned_cols=198 Identities=11% Similarity=0.068 Sum_probs=150.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCC----------CCCcEEEEEEc-cCCCeEEEEEeCCCeEEEEECCC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDP----------NEQVLRVLDYS-RNSRHLLVTAGDDGTLHLWDTTG 69 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~----------~~~~VssLafS-pdg~~lLaSGs~DGtI~IWDl~t 69 (633)
+|+|||++|+.+ .++.|++||+... .+..+..+ +...+..++|+ |+|+ .|+.++ ++.|++|++.+
T Consensus 251 ~~SpDG~~la~~-~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~-~la~~~-~~~i~~~~~~~ 326 (1045)
T 1k32_A 251 HLNTDGRRILFS-KGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGD-LIAFVS-RGQAFIQDVSG 326 (1045)
T ss_dssp EEEESSSCEEEE-ETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGG-CEEEEE-TTEEEEECTTS
T ss_pred eEcCCCCEEEEE-eCCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCCCCC-EEEEEE-cCEEEEEcCCC
Confidence 488999999887 4899999998443 44454431 12257789999 9998 566665 78999999987
Q ss_pred CCceeEEeccCCC-CeEEEEEcCCCCEEEEEeCCCeEE-EEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEE
Q 006743 70 RSPKVSWLKQHSA-PTAGISFSSDDKIIASVGLDKKLY-TYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVV 147 (633)
Q Consensus 70 ~~~~v~~l~~H~~-~VtsLafSPdg~~LaSgS~DGtVr-IWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~ 147 (633)
.. ...+..|.. .+.+++|+ +++.|++++.++.|+ +||+.+++......+...+.+++|+|||++|++++.++.|+
T Consensus 327 ~~--~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~ 403 (1045)
T 1k32_A 327 TY--VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIM 403 (1045)
T ss_dssp SB--EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEE
T ss_pred Cc--eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEE
Confidence 76 345677777 89999999 999999999988899 99999887665556778899999999999999999999999
Q ss_pred EEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 148 FYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 148 IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+||+.++. ...... .|.+.+.+++|+|+|++|+.++...+... .+..++.|++||+..
T Consensus 404 ~~d~~tg~-~~~~~~--~~~~~v~~~~~SpDG~~la~~~~~~~~~~--~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 404 TVDLETGK-PTVIER--SREAMITDFTISDNSRFIAYGFPLKHGET--DGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEETTTCC-EEEEEE--CSSSCCCCEEECTTSCEEEEEEEECSSTT--CSCCEEEEEEEETTT
T ss_pred EEECCCCc-eEEecc--CCCCCccceEECCCCCeEEEEecCccccc--cCCCCCeEEEEECCC
Confidence 99998873 333333 68889999999999888876532110000 001235788888754
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.51 E-value=8.8e-13 Score=138.25 Aligned_cols=200 Identities=13% Similarity=0.098 Sum_probs=134.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECC-CCceeEEEeCC-CCCcEEEEEEccCCCe-EEEEEe-------------CCCeEEE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLA-SGAKAAELKDP-NEQVLRVLDYSRNSRH-LLVTAG-------------DDGTLHL 64 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~-tgk~v~~~~~~-~~~~VssLafSpdg~~-lLaSGs-------------~DGtI~I 64 (633)
+|+|+|++|++++.+ .|.+|++. +++........ ... ...++|+|+++. +++++. .++.+.+
T Consensus 46 a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 46 TFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGH-PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSS-GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCC-CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence 479999999999888 99999997 77655433211 122 345889999974 344443 6899999
Q ss_pred EECCC-CCceeEEec----cCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEeCC-CCceee--Eee---CCCCeEEEEEec
Q 006743 65 WDTTG-RSPKVSWLK----QHSAPTAGISFSSDDKIIASVGL-DKKLYTYDPG-SRRPSS--CIT---YEAPFSSLAFID 132 (633)
Q Consensus 65 WDl~t-~~~~v~~l~----~H~~~VtsLafSPdg~~LaSgS~-DGtVrIWDlr-tgk~v~--~i~---h~~~ItsLafSP 132 (633)
|++.. ++ ....+. .+...+.+++|+|+|++|++++. ++.|++||+. +++... .+. +...+..++|+|
T Consensus 124 ~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp 202 (365)
T 1jof_A 124 FSVSETGK-LEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP 202 (365)
T ss_dssp EEECTTCC-EEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT
T ss_pred EccCCCCc-CcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC
Confidence 99974 33 222222 35678999999999998887764 6799999998 676532 232 356799999999
Q ss_pred CCCEEEEEEc-CCeEEEEECCC--CCCc--eEEEeec-----CCCC------CeeEEE-EccCCCeEEEeccCCCCeEEE
Q 006743 133 DDWILTAGTS-NGRVVFYDIRG--KPQP--LTVLRAC-----SSSE------AVSSLC-WQRAKPVFIDETTCKAETALL 195 (633)
Q Consensus 133 dG~~LatGs~-DGsV~IWDlrs--~~k~--v~~l~~~-----~H~~------~VtsLa-fsPdg~~Las~s~~sd~~lLl 195 (633)
||++|++++. ++.|.+|++.. +... ...+... +|.. .+.+++ |+|+|++|+......+.
T Consensus 203 dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~---- 278 (365)
T 1jof_A 203 TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKF---- 278 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST----
T ss_pred CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCC----
Confidence 9999988775 68999998763 3211 1122211 1222 588999 99988776543110000
Q ss_pred EeeCCCeEEccCCC
Q 006743 196 GGAVGDSILMPDPL 209 (633)
Q Consensus 196 Sgs~Dg~IkIWDlr 209 (633)
...+.|.+||+.
T Consensus 279 --~~~~~i~v~~~~ 290 (365)
T 1jof_A 279 --ELQGYIAGFKLR 290 (365)
T ss_dssp --TSCCEEEEEEEC
T ss_pred --CCCCeEEEEEEC
Confidence 001289999885
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.50 E-value=1.6e-12 Score=136.27 Aligned_cols=198 Identities=7% Similarity=0.023 Sum_probs=132.6
Q ss_pred CccCCCCE--EEEEE-------------CCCcEEEEECC-CCceeEEEeC---CCCCcEEEEEEccCCCeEEEEEe-CCC
Q 006743 1 MYNCKDEH--LASIS-------------LSGDLILHNLA-SGAKAAELKD---PNEQVLRVLDYSRNSRHLLVTAG-DDG 60 (633)
Q Consensus 1 AFSpdG~~--LaSgs-------------~DG~I~IWDl~-tgk~v~~~~~---~~~~~VssLafSpdg~~lLaSGs-~DG 60 (633)
+|+|+|++ ++++. .+|.+.+|++. +++....+.. .+...+.+++|+|+|+ +|+++. .++
T Consensus 89 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~-~l~~~~~~~~ 167 (365)
T 1jof_A 89 DADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET-YLYSADLTAN 167 (365)
T ss_dssp CTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTTT
T ss_pred EECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC-EEEEEcCCCC
Confidence 58999995 44553 68999999997 4665443331 2445678899999998 455554 478
Q ss_pred eEEEEECC-CCCce-eEEec--cCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEeCC--CCceee---Eee---C-----C
Q 006743 61 TLHLWDTT-GRSPK-VSWLK--QHSAPTAGISFSSDDKIIASVGL-DKKLYTYDPG--SRRPSS---CIT---Y-----E 122 (633)
Q Consensus 61 tI~IWDl~-t~~~~-v~~l~--~H~~~VtsLafSPdg~~LaSgS~-DGtVrIWDlr--tgk~v~---~i~---h-----~ 122 (633)
.|++||+. +++.. +..+. .|...+..++|+|+++++++++. ++.|.+|++. +++... .+. . .
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 247 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRD 247 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBC
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcc
Confidence 99999998 55522 12222 24667999999999999888775 6899999765 565421 121 1 1
Q ss_pred C------CeEEEE-EecCCCEEEEEEcCC------eEEEEECCCCCCceEEEe-ecCCCCCeeEEEEcc---CCCeEEEe
Q 006743 123 A------PFSSLA-FIDDDWILTAGTSNG------RVVFYDIRGKPQPLTVLR-ACSSSEAVSSLCWQR---AKPVFIDE 185 (633)
Q Consensus 123 ~------~ItsLa-fSPdG~~LatGs~DG------sV~IWDlrs~~k~v~~l~-~~~H~~~VtsLafsP---dg~~Las~ 185 (633)
. .+..++ |+|||++|+++..+. .|.+|++....+...... ...+...+..++|+| +|++|+++
T Consensus 248 ~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~ 327 (365)
T 1jof_A 248 PETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT 327 (365)
T ss_dssp TTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEE
T ss_pred cccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEE
Confidence 1 488999 999999988776432 899999963223222111 113455677889999 66665443
Q ss_pred ccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 186 TTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 186 s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+..++.|.+|++..
T Consensus 328 -----------~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 328 -----------DDQEGWLEIYRWKD 341 (365)
T ss_dssp -----------CSSSCEEEEEEEET
T ss_pred -----------EcCCCeEEEEEEch
Confidence 22357888887754
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.50 E-value=1.6e-12 Score=135.07 Aligned_cols=196 Identities=12% Similarity=0.056 Sum_probs=139.4
Q ss_pred CccCCCCEEEEEEC-CC--cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006743 1 MYNCKDEHLASISL-SG--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (633)
Q Consensus 1 AFSpdG~~LaSgs~-DG--~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l 77 (633)
+|+|||++|+.++. +| .|.+||+.+++....... +...+..++|+|+++ .|+.+..++.|++||+.+++. ....
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~-~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~g~~-~~~~ 118 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG-RGDNTFGGFLSPDDD-ALFYVKDGRNLMRVDLATLEE-NVVY 118 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS-SCBCSSSCEECTTSS-EEEEEETTTEEEEEETTTCCE-EEEE
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC-CCCCccceEEcCCCC-EEEEEeCCCeEEEEECCCCcc-eeee
Confidence 58999999999887 66 488899988776654443 444443468999998 788888889999999998874 3334
Q ss_pred ccCCCCeEEEE--EcCCCCEEEEEe----------------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEec-
Q 006743 78 KQHSAPTAGIS--FSSDDKIIASVG----------------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFID- 132 (633)
Q Consensus 78 ~~H~~~VtsLa--fSPdg~~LaSgS----------------------~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSP- 132 (633)
..+...+.... +++++++++... .+..|++||+.+++......+...+..++|+|
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~ 198 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPY 198 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETT
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCC
Confidence 44555554444 488999887532 34689999999998777777788899999999
Q ss_pred CCCEEEEEEcC------CeEEEEECCCCCCceEEEeecCCC--CCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEE
Q 006743 133 DDWILTAGTSN------GRVVFYDIRGKPQPLTVLRACSSS--EAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSIL 204 (633)
Q Consensus 133 dG~~LatGs~D------GsV~IWDlrs~~k~v~~l~~~~H~--~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~Ik 204 (633)
||+.|+....+ ..|++||+.... ...+. .+. ..+..++|+|+|+.|+..+...+ ..+..|+
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~--~~~~~~~~~~~~~spdg~~l~~~~~~~~-------~~~~~l~ 267 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKVK--THAEGESCTHEFWVPDGSALVYVSYLKG-------SPDRFIY 267 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSCC--CEESC--CCCTTEEEEEEEECTTSSCEEEEEEETT-------CCCEEEE
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEee--eCCCCcccccceECCCCCEEEEEecCCC-------CCcceEE
Confidence 99999877753 378888887652 23333 233 35888999999887765422111 1122488
Q ss_pred ccCCCC
Q 006743 205 MPDPLP 210 (633)
Q Consensus 205 IWDlr~ 210 (633)
+||+..
T Consensus 268 ~~d~~~ 273 (388)
T 3pe7_A 268 SADPET 273 (388)
T ss_dssp EECTTT
T ss_pred EEecCC
Confidence 898854
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.50 E-value=7.6e-14 Score=158.63 Aligned_cols=178 Identities=16% Similarity=0.157 Sum_probs=128.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCC---cEEEEEEccCCCeEEEEEeC---------CCeEEEEECC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQ---VLRVLDYSRNSRHLLVTAGD---------DGTLHLWDTT 68 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~---~VssLafSpdg~~lLaSGs~---------DGtI~IWDl~ 68 (633)
+|+|+|++++ .+.|+.|++||+.+++....+.. +.. .+.+++|+|||+ +|+.++. ++.|++||+.
T Consensus 22 ~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~SpDg~-~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 22 NWISGQEYLH-QSADNNIVLYNIETGQSYTILSN-RTMKSVNASNYGLSPDRQ-FVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp EESSSSEEEE-ECTTSCEEEEESSSCCEEEEECH-HHHHTTTCSEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred EECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEcc-ccccccceeeEEECCCCC-eEEEEecCceeEEeecceEEEEEECC
Confidence 4899996555 45799999999999887666543 221 267899999998 6666665 7899999998
Q ss_pred CCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee--CCCCe-----------------EEEE
Q 006743 69 GRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT--YEAPF-----------------SSLA 129 (633)
Q Consensus 69 t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~--h~~~I-----------------tsLa 129 (633)
+++.. ........+.+++|+|||++|+.+. |+.|++||+.+++...... +...| .+++
T Consensus 99 ~g~~~--~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 99 NGEFV--RGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TTEEC--CSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred CCccc--cceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 87631 0011235689999999999999986 7899999999887765432 22222 4899
Q ss_pred EecCCCEEEEEEcCC----------------------------------eEEEEECCCCCCc-eEEEe----ecCCCCCe
Q 006743 130 FIDDDWILTAGTSNG----------------------------------RVVFYDIRGKPQP-LTVLR----ACSSSEAV 170 (633)
Q Consensus 130 fSPdG~~LatGs~DG----------------------------------sV~IWDlrs~~k~-v~~l~----~~~H~~~V 170 (633)
|+|||++|+.++.|. .|++||+.++... ...+. ..+|...+
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF 255 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE
Confidence 999999999987652 7899999876321 01111 12577889
Q ss_pred eEEEEccCCCeEEE
Q 006743 171 SSLCWQRAKPVFID 184 (633)
Q Consensus 171 tsLafsPdg~~Las 184 (633)
.+++|+||+++++.
T Consensus 256 ~~~~~SpD~~~~~~ 269 (719)
T 1z68_A 256 SWLTWVTDERVCLQ 269 (719)
T ss_dssp EEEEESSSSEEEEE
T ss_pred EEeEEeCCCeEEEE
Confidence 99999998655544
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.50 E-value=6.6e-12 Score=125.83 Aligned_cols=190 Identities=11% Similarity=0.102 Sum_probs=137.3
Q ss_pred CCCCEEEEEEC-CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec--cC
Q 006743 4 CKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK--QH 80 (633)
Q Consensus 4 pdG~~LaSgs~-DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~--~H 80 (633)
++|+++++... ++.|.+|| .+++.+..+.......+..+++.++++ ++++...++.|++||..... +..+. .+
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~--~~~~~~~~~ 162 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGNV--LHKFGCSKH 162 (286)
T ss_dssp TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSCE--EEEEECTTT
T ss_pred CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCCE--EEEeCCCCc
Confidence 45555554433 78999999 577777777544455678899999997 77777788999999976443 33332 44
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeC---CCCeEEEEEecCCCEEEEEEcCC-eEEEEECCCCCC
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---EAPFSSLAFIDDDWILTAGTSNG-RVVFYDIRGKPQ 156 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h---~~~ItsLafSPdG~~LatGs~DG-sV~IWDlrs~~k 156 (633)
...+.+++++++++++++...++.|++||.. ++.+..+.. ...+..++++++|+++++...++ .|++||... +
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g--~ 239 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG--Q 239 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS--C
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC--C
Confidence 5678999999999988888889999999985 455555532 25789999999999888888776 999999654 2
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCC
Q 006743 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (633)
Q Consensus 157 ~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~ 213 (633)
.+..+........+.+++++|+ +.++++ +.|+.|++|++....+
T Consensus 240 ~~~~~~~~~~~~~~~~i~~~~~------------g~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 240 LISALESKVKHAQCFDVALMDD------------GSVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp EEEEEEESSCCSCEEEEEEETT------------TEEEEE-ETTTEEEEEECSCCCC
T ss_pred EEEEEcccCCCCcceeEEECCC------------CcEEEE-CCCCeEEEEEcccccc
Confidence 3444443333345778999884 344555 3589999998765433
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.50 E-value=3.6e-13 Score=149.68 Aligned_cols=186 Identities=10% Similarity=0.049 Sum_probs=132.4
Q ss_pred CccCCCCEEEEEEC-CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeC---CCeEEEEECCC--CCcee
Q 006743 1 MYNCKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD---DGTLHLWDTTG--RSPKV 74 (633)
Q Consensus 1 AFSpdG~~LaSgs~-DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~---DGtI~IWDl~t--~~~~v 74 (633)
+|+|||++||.++. ||.+.||++.++ ....+..++...+..++|+|+ + ++++++. +....||.+.. .....
T Consensus 28 ~~~~DG~~la~~s~~~g~~~lw~~~~g-~~~~lt~~~~~~~~~~~~spd-~-~l~~~~~~~g~~~~~l~~~~~~~~g~~~ 104 (582)
T 3o4h_A 28 QGVVDGDKLLVVGFSEGSVNAYLYDGG-ETVKLNREPINSVLDPHYGVG-R-VILVRDVSKGAEQHALFKVNTSRPGEEQ 104 (582)
T ss_dssp EEEETTTEEEEEEEETTEEEEEEEETT-EEEECCSSCCSEECEECTTCS-E-EEEEEECSTTSCCEEEEEEETTSTTCCE
T ss_pred ecCCCCCeEEEEEccCCceeEEEEcCC-CcEeeecccccccccccCCCC-e-EEEEeccCCCCcceEEEEEeccCCCccc
Confidence 47899999999887 999999998554 445565545467888999998 4 7777775 45556655532 22112
Q ss_pred EEeccCCCCeEEEEEcCCCC--EEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcC----CeEEE
Q 006743 75 SWLKQHSAPTAGISFSSDDK--IIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSN----GRVVF 148 (633)
Q Consensus 75 ~~l~~H~~~VtsLafSPdg~--~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~D----GsV~I 148 (633)
.+..+ ..+...+|+|+++ .++++..| .+.+||+.+++......+.. .+++|+|||++|+.++.+ +.|++
T Consensus 105 -~l~~~-~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~ 179 (582)
T 3o4h_A 105 -RLEAV-KPMRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFT 179 (582)
T ss_dssp -ECTTS-CSBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred -cccCC-CCceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEE
Confidence 33333 3355778888775 34444444 45599999988776665444 889999999999988877 78999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCC--eEEccCCCC
Q 006743 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD--SILMPDPLP 210 (633)
Q Consensus 149 WDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg--~IkIWDlr~ 210 (633)
||+.+++. ..+. .|.+.+..++|+|||++|+.. ..++ .|++||+..
T Consensus 180 ~d~~~g~~--~~l~--~~~~~~~~~~~SpDG~~l~~~------------~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 180 SNLSSGGL--RVFD--SGEGSFSSASISPGMKVTAGL------------ETAREARLVTVDPRD 227 (582)
T ss_dssp EETTTCCC--EEEC--CSSCEEEEEEECTTSCEEEEE------------ECSSCEEEEEECTTT
T ss_pred EcCCCCCc--eEee--cCCCccccceECCCCCEEEEc------------cCCCeeEEEEEcCCC
Confidence 99987742 3343 688889999999988777632 3455 788888754
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.48 E-value=4.9e-14 Score=160.22 Aligned_cols=177 Identities=12% Similarity=0.107 Sum_probs=125.0
Q ss_pred CccCCCCEEEEEEC---------CCcEEEEECCCCcee--EEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Q 006743 1 MYNCKDEHLASISL---------SGDLILHNLASGAKA--AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG 69 (633)
Q Consensus 1 AFSpdG~~LaSgs~---------DG~I~IWDl~tgk~v--~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t 69 (633)
+|+|||++|+.++. ++.|++||+.+++.+ ..+ ...+..++|+|||+ .|+.+. |+.|++||+.+
T Consensus 66 ~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l----~~~~~~~~~SPDG~-~la~~~-~~~i~~~~~~~ 139 (719)
T 1z68_A 66 GLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL----PRPIQYLCWSPVGS-KLAYVY-QNNIYLKQRPG 139 (719)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC----CSSBCCEEECSSTT-CEEEEE-TTEEEEESSTT
T ss_pred EECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec----CcccccceECCCCC-EEEEEE-CCeEEEEeCCC
Confidence 48999999998876 789999999888763 222 23467799999998 566654 78999999987
Q ss_pred CCceeEEeccCCCCe-----------------EEEEEcCCCCEEEEEeCCC-----------------------------
Q 006743 70 RSPKVSWLKQHSAPT-----------------AGISFSSDDKIIASVGLDK----------------------------- 103 (633)
Q Consensus 70 ~~~~v~~l~~H~~~V-----------------tsLafSPdg~~LaSgS~DG----------------------------- 103 (633)
++.......++...| .+++|+|||++|++++.|.
T Consensus 140 g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~ 219 (719)
T 1z68_A 140 DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGA 219 (719)
T ss_dssp SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTS
T ss_pred CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCC
Confidence 764321222333322 4899999999999988652
Q ss_pred -----eEEEEeCCCCcee---eE-----e-eCCCCeEEEEEecCCCEEEEEEcC----CeEEEEE----CCCCCCceEEE
Q 006743 104 -----KLYTYDPGSRRPS---SC-----I-TYEAPFSSLAFIDDDWILTAGTSN----GRVVFYD----IRGKPQPLTVL 161 (633)
Q Consensus 104 -----tVrIWDlrtgk~v---~~-----i-~h~~~ItsLafSPdG~~LatGs~D----GsV~IWD----lrs~~k~v~~l 161 (633)
.|++||+.+++.. .. + .+...+..++|+||++++++.... ..|++|| +.++.. ...+
T Consensus 220 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~-~~~~ 298 (719)
T 1z68_A 220 KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC-PKTQ 298 (719)
T ss_dssp CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC-CGGG
T ss_pred CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce-EEEE
Confidence 7899999987653 21 1 366779999999998777764432 2488899 766422 1111
Q ss_pred e--ecCCCCCee-----EEEEccCCCeEEE
Q 006743 162 R--ACSSSEAVS-----SLCWQRAKPVFID 184 (633)
Q Consensus 162 ~--~~~H~~~Vt-----sLafsPdg~~Las 184 (633)
. ...|.+.+. .+.|+|+|+.++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 299 EHIEESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp EEEEECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred ecccccCCceEccccCCccEECCCCCeEEE
Confidence 0 025667776 8999998876543
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.48 E-value=4e-12 Score=131.68 Aligned_cols=201 Identities=11% Similarity=0.100 Sum_probs=150.7
Q ss_pred CccCCCCEEEEEECC------------------------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEE
Q 006743 1 MYNCKDEHLASISLS------------------------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTA 56 (633)
Q Consensus 1 AFSpdG~~LaSgs~D------------------------G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSG 56 (633)
|++++|+++++...+ +.|.+||..+++.+..+...+......|+++++++ ++++.
T Consensus 30 a~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d 108 (329)
T 3fvz_A 30 ALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-YWVTD 108 (329)
T ss_dssp EECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-EEEEE
T ss_pred EECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-EEEEE
Confidence 478999988887766 47999999889887766544445678899999998 88888
Q ss_pred eCCCeEEEEECCCCCceeEEe---------ccCCCCeEEEEEcC-CCCEEEEEe-CCCeEEEEeCCCCceeeEeeC-C--
Q 006743 57 GDDGTLHLWDTTGRSPKVSWL---------KQHSAPTAGISFSS-DDKIIASVG-LDKKLYTYDPGSRRPSSCITY-E-- 122 (633)
Q Consensus 57 s~DGtI~IWDl~t~~~~v~~l---------~~H~~~VtsLafSP-dg~~LaSgS-~DGtVrIWDlrtgk~v~~i~h-~-- 122 (633)
..++.|++||..+....+..+ ..+-....+|+++| +++++++.+ .++.|++|| .+++.+..+.. .
T Consensus 109 ~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~ 187 (329)
T 3fvz_A 109 VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSG 187 (329)
T ss_dssp TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCS
T ss_pred CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCC
Confidence 889999999987653223444 34455789999999 888888886 699999999 55666666531 1
Q ss_pred --------CCeEEEEEecC-CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeE
Q 006743 123 --------APFSSLAFIDD-DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETA 193 (633)
Q Consensus 123 --------~~ItsLafSPd-G~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~l 193 (633)
.....++++|+ +.++++...++.|++||..++ +.+..+....+...+.+++|+| +..++. ++..
T Consensus 188 ~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~p-g~~~~~-----~g~~ 260 (329)
T 3fvz_A 188 SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK-EFVREIKHASFGRNVFAISYIP-GFLFAV-----NGKP 260 (329)
T ss_dssp SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC-CEEEEECCTTTTTCEEEEEEET-TEEEEE-----ECCC
T ss_pred CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC-cEEEEEeccccCCCcceeeecC-CEEEEe-----CCCE
Confidence 23889999998 777777778899999999865 4455555456778899999999 433333 2335
Q ss_pred EEEeeCCCeEEccCCCC
Q 006743 194 LLGGAVGDSILMPDPLP 210 (633)
Q Consensus 194 LlSgs~Dg~IkIWDlr~ 210 (633)
+++...+..|++||+..
T Consensus 261 ~v~~~~~~~v~~~~~~~ 277 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSS 277 (329)
T ss_dssp CTTCSCCCCEEEEETTT
T ss_pred EeccCCCcEEEEEEcCC
Confidence 55556677899998753
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.40 E-value=3e-12 Score=147.31 Aligned_cols=178 Identities=7% Similarity=-0.027 Sum_probs=125.0
Q ss_pred ccCCCCEEEEEECC---------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc
Q 006743 2 YNCKDEHLASISLS---------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (633)
Q Consensus 2 FSpdG~~LaSgs~D---------G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~ 72 (633)
|||||++|+.++.+ +.+.+||+.+++... +.. +...+..++|+|||+ .|+.+ .|+.|++||+.++..
T Consensus 69 ~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~-~~~~~~~~~~SPdG~-~la~~-~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EER-IPNNTQWVTWSPVGH-KLAYV-WNNDIYVKIEPNLPS 144 (740)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSC-CCTTEEEEEECSSTT-CEEEE-ETTEEEEESSTTSCC
T ss_pred ECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-ccc-CCCcceeeEECCCCC-EEEEE-ECCeEEEEECCCCce
Confidence 69999999998876 667899999887543 443 445678899999998 45655 468999999987764
Q ss_pred eeEEeccCCCCe-----------------EEEEEcCCCCEEEEEeCCC--------------------------------
Q 006743 73 KVSWLKQHSAPT-----------------AGISFSSDDKIIASVGLDK-------------------------------- 103 (633)
Q Consensus 73 ~v~~l~~H~~~V-----------------tsLafSPdg~~LaSgS~DG-------------------------------- 103 (633)
...+..++...+ ..+.|+|||++|+.++.|.
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~ 224 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV 224 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc
Confidence 322222333333 3489999999999875331
Q ss_pred ----eEEEEeCCC---C---ceeeEee------CCCCeEEEEEecCCCEEEEEEc----CCeEEEEECCCCC----C-ce
Q 006743 104 ----KLYTYDPGS---R---RPSSCIT------YEAPFSSLAFIDDDWILTAGTS----NGRVVFYDIRGKP----Q-PL 158 (633)
Q Consensus 104 ----tVrIWDlrt---g---k~v~~i~------h~~~ItsLafSPdG~~LatGs~----DGsV~IWDlrs~~----k-~v 158 (633)
.|++||+.+ + +...... +...+..++|+|||+.++.... +..|++||+.++. + .+
T Consensus 225 ~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~ 304 (740)
T 4a5s_A 225 NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVA 304 (740)
T ss_dssp CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGG
T ss_pred CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEE
Confidence 588899998 7 3333322 6667999999999997765543 2379999998874 1 11
Q ss_pred EEEeecCCCCCee-----EEEEccCCCeEE
Q 006743 159 TVLRACSSSEAVS-----SLCWQRAKPVFI 183 (633)
Q Consensus 159 ~~l~~~~H~~~Vt-----sLafsPdg~~La 183 (633)
..+....|...|. .+.|+|||+.++
T Consensus 305 ~~l~~~~~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 305 RQHIEMSTTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp GCEEEECSSSCSSSSSCCCCEECTTSSEEE
T ss_pred EEeeeccCCceEccCcCCCceEcCCCCEEE
Confidence 2221125666655 789999988765
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.37 E-value=9.3e-11 Score=117.40 Aligned_cols=189 Identities=7% Similarity=0.083 Sum_probs=133.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeC-----CCCCcEEEEEEc-cCCCeEEEEEeC-CCeEEEEECCCCCce
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD-----PNEQVLRVLDYS-RNSRHLLVTAGD-DGTLHLWDTTGRSPK 73 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~-----~~~~~VssLafS-pdg~~lLaSGs~-DGtI~IWDl~t~~~~ 73 (633)
+++++|+++++...++.|.+||.. ++.+..+.. .+...+..+++. +++. ++++... ++.|++||.. ++.
T Consensus 36 ~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~~~~~i~~~d~~-g~~- 111 (286)
T 1q7f_A 36 AVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERSPTHQIQIYNQY-GQF- 111 (286)
T ss_dssp EECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECGGGCEEEEECTT-SCE-
T ss_pred EECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCCCCCEEEEECCC-CcE-
Confidence 367889888887889999999976 666666642 122457789994 5654 5555533 8999999954 332
Q ss_pred eEEe-ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee---CCCCeEEEEEecCCCEEEEEEcCCeEEEE
Q 006743 74 VSWL-KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT---YEAPFSSLAFIDDDWILTAGTSNGRVVFY 149 (633)
Q Consensus 74 v~~l-~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~---h~~~ItsLafSPdG~~LatGs~DGsV~IW 149 (633)
+..+ ..+...+.+++++++++++++...++.|++||.. ++.+..+. +...+.+++++++|+++++...++.|++|
T Consensus 112 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 190 (286)
T 1q7f_A 112 VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVF 190 (286)
T ss_dssp EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEE
T ss_pred EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEE
Confidence 3333 2344678999999999988888888999999965 55555553 34568999999999988887889999999
Q ss_pred ECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCC-eEEccCC
Q 006743 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD-SILMPDP 208 (633)
Q Consensus 150 Dlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg-~IkIWDl 208 (633)
|.... .+..+...++...+.+++++++|+++ ++...++ .|.+||.
T Consensus 191 ~~~g~--~~~~~~~~g~~~~p~~i~~d~~G~l~------------v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 191 NYEGQ--YLRQIGGEGITNYPIGVGINSNGEIL------------IADNHNNFNLTIFTQ 236 (286)
T ss_dssp ETTCC--EEEEESCTTTSCSEEEEEECTTCCEE------------EEECSSSCEEEEECT
T ss_pred cCCCC--EEEEEccCCccCCCcEEEECCCCCEE------------EEeCCCCEEEEEECC
Confidence 98543 33334322334678899999865444 4444454 8888884
No 169
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.36 E-value=1.7e-10 Score=117.85 Aligned_cols=193 Identities=12% Similarity=0.124 Sum_probs=134.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCC----CeEEEEECCCCCceeEE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD----GTLHLWDTTGRSPKVSW 76 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~D----GtI~IWDl~t~~~~v~~ 76 (633)
+|+++|++++++..++.|++||..+++....... ....+.+++|+++++ ++++...+ +.|.+||..+.... ..
T Consensus 51 ~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~~-~~ 127 (333)
T 2dg1_A 51 NFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS-HKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNLQ-DI 127 (333)
T ss_dssp EECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC-SSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSCE-EE
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeC-CCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEEE-EE
Confidence 4788999777888899999999988776554432 446688999999987 66666665 68999999877632 12
Q ss_pred ec--cCCCCeEEEEEcCCCCEEEEEeC------CCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEE-EcCCeEE
Q 006743 77 LK--QHSAPTAGISFSSDDKIIASVGL------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAG-TSNGRVV 147 (633)
Q Consensus 77 l~--~H~~~VtsLafSPdg~~LaSgS~------DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatG-s~DGsV~ 147 (633)
+. .+...+++++++|+++++++... .+.|..||..+++..........+..++|+|+|++|+++ ..++.|+
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~ 207 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLH 207 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEE
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEE
Confidence 22 34567999999999988877654 356888887766655444444568899999999866554 4678999
Q ss_pred EEECCCCCCceEEE-----eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 148 FYDIRGKPQPLTVL-----RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 148 IWDlrs~~k~v~~l-----~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
+||++.....+..+ ........+.+++++++|++ +++...++.|.+||.
T Consensus 208 ~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l------------~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 208 RIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNL------------YVAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCE------------EEEEETTTEEEEECT
T ss_pred EEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCE------------EEEEcCCCEEEEECC
Confidence 99997432222211 11111146778888886543 444445678888876
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.34 E-value=2.6e-11 Score=125.95 Aligned_cols=202 Identities=9% Similarity=-0.036 Sum_probs=131.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEE--EccCCCeEEEEE----------------------
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLD--YSRNSRHLLVTA---------------------- 56 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLa--fSpdg~~lLaSG---------------------- 56 (633)
+|+|||++|+.+..++.|++||+.+++....+.. +...+.... +++++. +++..
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 87 FLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV-PAEWVGYGTWVANSDCT-KLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSS-EEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec-hhhcccccceeECCCCC-eeccccccCcccccccccchhhhhhcc
Confidence 4899999999999999999999999887766654 333333333 488887 45432
Q ss_pred eCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCCceeeEeeCC--CCeEE
Q 006743 57 GDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS-DDKIIASVGLD------KKLYTYDPGSRRPSSCITYE--APFSS 127 (633)
Q Consensus 57 s~DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSP-dg~~LaSgS~D------GtVrIWDlrtgk~v~~i~h~--~~Its 127 (633)
..+..|++||+.+++ ...+..+...+..++|+| +++.|+.+..+ ..|+++|+..+.......+. ..+..
T Consensus 165 ~~~~~l~~~d~~~g~--~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGE--STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTH 242 (388)
T ss_dssp CCCEEEEEEETTTCC--EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEE
T ss_pred CCcceEEEEECCCCc--eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCccccc
Confidence 244789999998876 455566777899999999 99999887763 37888998776655444443 35778
Q ss_pred EEEecCCCEEEEEEc-CC----eEEEEECCCCCCceEEEeecCCCC---CeeEEEEccCCCeEEEeccCCCCeEEEEeeC
Q 006743 128 LAFIDDDWILTAGTS-NG----RVVFYDIRGKPQPLTVLRACSSSE---AVSSLCWQRAKPVFIDETTCKAETALLGGAV 199 (633)
Q Consensus 128 LafSPdG~~LatGs~-DG----sV~IWDlrs~~k~v~~l~~~~H~~---~VtsLafsPdg~~Las~s~~sd~~lLlSgs~ 199 (633)
++|+|||+.|+..+. ++ .|++||+.+++. ..+....++.. ....++|+|+|+.|+..... + .......
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~-~~~~~~~ 318 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQD--D-SGYKIEN 318 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-EEEEEECCEEEEEECTTSSEEEEEECCC---------------CC
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCCce-EEEEcCCCceeeeecCCCCeEccCCCcceeEeee--c-cccccCC
Confidence 999999997765443 22 399999998742 12212111100 01223688888777653110 0 0011244
Q ss_pred CCeEEccCCCC
Q 006743 200 GDSILMPDPLP 210 (633)
Q Consensus 200 Dg~IkIWDlr~ 210 (633)
+..|++||+..
T Consensus 319 ~~~i~~~d~~~ 329 (388)
T 3pe7_A 319 DPFLYVFNMKN 329 (388)
T ss_dssp CCEEEEEETTT
T ss_pred CCEEEEEeccC
Confidence 67888898754
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.32 E-value=7.9e-11 Score=121.91 Aligned_cols=192 Identities=7% Similarity=0.088 Sum_probs=136.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-eeEEEe--------CCCCCcEEEEEEcc-CCCeEEEEEe-CCCeEEEEECCC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGA-KAAELK--------DPNEQVLRVLDYSR-NSRHLLVTAG-DDGTLHLWDTTG 69 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk-~v~~~~--------~~~~~~VssLafSp-dg~~lLaSGs-~DGtI~IWDl~t 69 (633)
+++++|+++++...++.|++||..... .+..+. ..+......|+++| ++. ++++.+ .++.|++||..+
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~~~g 175 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFSPSG 175 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEECTTS
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEcCCC
Confidence 467899988888888999999975432 455552 12333577899999 565 777775 689999999544
Q ss_pred CCceeEEecc----------CCCCeEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeEee---CCCCeEEEEEecCCC
Q 006743 70 RSPKVSWLKQ----------HSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCIT---YEAPFSSLAFIDDDW 135 (633)
Q Consensus 70 ~~~~v~~l~~----------H~~~VtsLafSPd-g~~LaSgS~DGtVrIWDlrtgk~v~~i~---h~~~ItsLafSPdG~ 135 (633)
.. +..+.. +-....+|+++|+ ++++++...++.|++||..+++.+..+. +...+.+++++| +.
T Consensus 176 ~~--~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~ 252 (329)
T 3fvz_A 176 KF--VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GF 252 (329)
T ss_dssp CE--EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TE
T ss_pred CE--EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CE
Confidence 32 333332 2234899999997 7777777888999999999888887773 556789999999 33
Q ss_pred EEEEE-------EcCCeEEEEECCCCCCceEEEe-ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccC
Q 006743 136 ILTAG-------TSNGRVVFYDIRGKPQPLTVLR-ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (633)
Q Consensus 136 ~LatG-------s~DGsV~IWDlrs~~k~v~~l~-~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWD 207 (633)
.++.. ..+..|++||..++. .+..+. ...+...+.+|+++|+| .++++...++.|++|+
T Consensus 253 ~~~~~g~~~v~~~~~~~v~~~~~~~g~-~~~~~~~~~~~~~~p~~ia~~~dG------------~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 253 LFAVNGKPYFGDQEPVQGFVMNFSSGE-IIDVFKPVRKHFDMPHDIVASEDG------------TVYIGDAHTNTVWKFT 319 (329)
T ss_dssp EEEEECCCCTTCSCCCCEEEEETTTCC-EEEEECCSSSCCSSEEEEEECTTS------------EEEEEESSSCCEEEEE
T ss_pred EEEeCCCEEeccCCCcEEEEEEcCCCe-EEEEEcCCCCccCCeeEEEECCCC------------CEEEEECCCCEEEEEe
Confidence 33333 334589999998873 333332 12566778999999854 4556666788899988
Q ss_pred CC
Q 006743 208 PL 209 (633)
Q Consensus 208 lr 209 (633)
+.
T Consensus 320 ~~ 321 (329)
T 3fvz_A 320 LT 321 (329)
T ss_dssp EE
T ss_pred CC
Confidence 64
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.31 E-value=1.6e-10 Score=116.78 Aligned_cols=187 Identities=11% Similarity=0.064 Sum_probs=132.6
Q ss_pred CccCCCC-EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 1 MYNCKDE-HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 1 AFSpdG~-~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
+|+++|+ +++++..++.|..||..++ ...+.. ....+.+++++++++ ++++...++.|.+||..+++.. .....
T Consensus 34 ~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~-~~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g~~~-~~~~~ 108 (296)
T 3e5z_A 34 VYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH-PSHHQNGHCLNKQGH-LIACSHGLRRLERQREPGGEWE-SIADS 108 (296)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES-SCSSEEEEEECTTCC-EEEEETTTTEEEEECSTTCCEE-EEECE
T ss_pred eEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC-CCCCcceeeECCCCc-EEEEecCCCeEEEEcCCCCcEE-EEeec
Confidence 4889998 6777888999999998776 555554 456678899999997 6666666789999999766632 22111
Q ss_pred ----CCCCeEEEEEcCCCCEEEEE----e-------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEE
Q 006743 80 ----HSAPTAGISFSSDDKIIASV----G-------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (633)
Q Consensus 80 ----H~~~VtsLafSPdg~~LaSg----S-------------~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~La 138 (633)
....+++++++|+|+++++. . ..+.|..+|.. ++.............++|+|+++.++
T Consensus 109 ~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv 187 (296)
T 3e5z_A 109 FEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLV 187 (296)
T ss_dssp ETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEE
T ss_pred cCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEE
Confidence 12356789999999988873 3 13467777776 55554455667789999999999997
Q ss_pred EEEcCCeEEEEECCCCCCc---eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 139 AGTSNGRVVFYDIRGKPQP---LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 139 tGs~DGsV~IWDlrs~~k~---v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
+...++.|++||+...... ...+ ..+...+.+++++++|+++ ++. ++.|.+||..
T Consensus 188 ~~~~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G~l~------------v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 188 SDTGDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGGLIW------------ASA--GDGVHVLTPD 245 (296)
T ss_dssp EETTTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTSCEE------------EEE--TTEEEEECTT
T ss_pred EeCCCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCCCEE------------EEc--CCeEEEECCC
Confidence 7777899999999732222 2233 2355667788888865433 333 6778888763
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.30 E-value=2.8e-11 Score=135.92 Aligned_cols=176 Identities=10% Similarity=-0.016 Sum_probs=123.0
Q ss_pred ccCCCCEEEEE--ECCCcEEEEECCCCceeEEEeCCCCCcEE---------EEEEc--cCCCe-EEEEEeCCCeEEEEEC
Q 006743 2 YNCKDEHLASI--SLSGDLILHNLASGAKAAELKDPNEQVLR---------VLDYS--RNSRH-LLVTAGDDGTLHLWDT 67 (633)
Q Consensus 2 FSpdG~~LaSg--s~DG~I~IWDl~tgk~v~~~~~~~~~~Vs---------sLafS--pdg~~-lLaSGs~DGtI~IWDl 67 (633)
|++++-+++.. +.++...||....+.....+..+. ..+. ...|+ ||++. ++++...+..|++|++
T Consensus 31 ~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~ 109 (662)
T 3azo_A 31 AVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAP-WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEP 109 (662)
T ss_dssp EETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTT-CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECT
T ss_pred EcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCC-ccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcC
Confidence 45554455555 447889999865555556666533 2333 34565 99985 4444444677888887
Q ss_pred C--C-CCceeEEecc-----CCCCeEEEEEcCCCCEEEEEeCC----------CeEEEEeCCC------CceeeEe-eCC
Q 006743 68 T--G-RSPKVSWLKQ-----HSAPTAGISFSSDDKIIASVGLD----------KKLYTYDPGS------RRPSSCI-TYE 122 (633)
Q Consensus 68 ~--t-~~~~v~~l~~-----H~~~VtsLafSPdg~~LaSgS~D----------GtVrIWDlrt------gk~v~~i-~h~ 122 (633)
. + +. ...+.. |...+.+++|+|||+.|++++.| ..|++||+.+ ++..... .+.
T Consensus 110 ~~~g~~~--~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~ 187 (662)
T 3azo_A 110 DAPGGAV--PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH 187 (662)
T ss_dssp TSTTCCC--CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCS
T ss_pred CCCCCCC--CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCC
Confidence 6 3 44 344555 66788999999999999999877 5899999998 6665555 556
Q ss_pred CCeEEEEEecCCCEEEEEEcCC--------eEEEEECCC-CC--CceEEEeecCCCCCeeEEEEccCCCeE
Q 006743 123 APFSSLAFIDDDWILTAGTSNG--------RVVFYDIRG-KP--QPLTVLRACSSSEAVSSLCWQRAKPVF 182 (633)
Q Consensus 123 ~~ItsLafSPdG~~LatGs~DG--------sV~IWDlrs-~~--k~v~~l~~~~H~~~VtsLafsPdg~~L 182 (633)
..+..++|+|||++|+.++.++ .|++||+.. +. ....+.. .|...+..++|+|+|+++
T Consensus 188 ~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~--~~~~~~~~~~~spdg~l~ 256 (662)
T 3azo_A 188 RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG--GPEEAIAQAEWAPDGSLI 256 (662)
T ss_dssp SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE--ETTBCEEEEEECTTSCEE
T ss_pred CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC--CCCceEcceEECCCCeEE
Confidence 6788899999999999887553 799999983 41 2222222 456889999999987643
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.29 E-value=3.4e-11 Score=135.22 Aligned_cols=165 Identities=16% Similarity=0.090 Sum_probs=118.5
Q ss_pred CccCCCCEEEEEECC----------CcEEEEECCC------CceeEEEe-CCCCCcEEEEEEccCCCeEEEEEeCC----
Q 006743 1 MYNCKDEHLASISLS----------GDLILHNLAS------GAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGDD---- 59 (633)
Q Consensus 1 AFSpdG~~LaSgs~D----------G~I~IWDl~t------gk~v~~~~-~~~~~~VssLafSpdg~~lLaSGs~D---- 59 (633)
+|+|||++|+.++.+ ..|++||+.+ ++. ..+. . +...+..++|+|||+ +|+.++.+
T Consensus 136 ~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~-~~~~~~~~~~SpDG~-~la~~~~~~~~~ 212 (662)
T 3azo_A 136 VLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDD-AHRFVTGPRLSPDGR-QAVWLAWDHPRM 212 (662)
T ss_dssp EEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCS-CSSEECCCEECTTSS-EEEEEEECTTCC
T ss_pred EECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEec-CCCcccCceECCCCC-EEEEEECCCCCC
Confidence 489999999988876 5899999987 443 4444 3 335566789999998 56655544
Q ss_pred ----CeEEEEECC-CCC--ceeEEeccCCCCeEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCceeeEeeCCCC------
Q 006743 60 ----GTLHLWDTT-GRS--PKVSWLKQHSAPTAGISFSSDDKIIASVGLDK--KLYTYDPGSRRPSSCITYEAP------ 124 (633)
Q Consensus 60 ----GtI~IWDl~-t~~--~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DG--tVrIWDlrtgk~v~~i~h~~~------ 124 (633)
..|++||+. ++. ........|...+..++|+|||++++++..++ .|++||+.+++......+...
T Consensus 213 ~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 213 PWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLW 292 (662)
T ss_dssp TTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCC
T ss_pred CCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccc
Confidence 479999998 451 22333445678899999999999888888888 788888877776554432211
Q ss_pred ---eEEEEEecCCCEEEEEEcCCeEEEE--ECCCCCCceEEEeecCCCCCeeEE
Q 006743 125 ---FSSLAFIDDDWILTAGTSNGRVVFY--DIRGKPQPLTVLRACSSSEAVSSL 173 (633)
Q Consensus 125 ---ItsLafSPdG~~LatGs~DGsV~IW--Dlrs~~k~v~~l~~~~H~~~VtsL 173 (633)
+.+++|+|++++++++.. +.++|| |+.++ .+..+. .|...+..+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~--~~~~l~--~~~~~~~~~ 341 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESG--ELVDAA--GPWTEWAAT 341 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT--EEEECC--SSCCEEEEE
T ss_pred cccCceEeEeCCCEEEEEEEc-CccEEEEEECCCC--cEEEec--CCCCeEEEE
Confidence 567899999999999998 999999 55444 233333 556666666
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.29 E-value=1.1e-11 Score=128.37 Aligned_cols=198 Identities=11% Similarity=0.015 Sum_probs=131.7
Q ss_pred CccCCCCEEEEEECC---CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006743 1 MYNCKDEHLASISLS---GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (633)
Q Consensus 1 AFSpdG~~LaSgs~D---G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l 77 (633)
+|+|||++|+..... ..|++||+.+++... +..+.......+.|+|+++ .|+.++.++.|++||+.+++. ....
T Consensus 42 ~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~~~~-~~~~ 118 (396)
T 3c5m_A 42 CFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-LTEGKGDNTFGGFISTDER-AFFYVKNELNLMKVDLETLEE-QVIY 118 (396)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-CCCSSCBCTTTCEECTTSS-EEEEEETTTEEEEEETTTCCE-EEEE
T ss_pred cCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-eecCCCCccccceECCCCC-EEEEEEcCCcEEEEECCCCCc-EEEE
Confidence 589999998877543 368899988776543 3332333233368999998 788888888999999988763 2233
Q ss_pred ccCCCCeEE-------------------EEEcCCCCEEEEE-----eCCCeEEEEeCCCCceeeEeeCCCCeEEEEEec-
Q 006743 78 KQHSAPTAG-------------------ISFSSDDKIIASV-----GLDKKLYTYDPGSRRPSSCITYEAPFSSLAFID- 132 (633)
Q Consensus 78 ~~H~~~Vts-------------------LafSPdg~~LaSg-----S~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSP- 132 (633)
..+...... ++|+|+++.++.+ ..+..|++||+.+++......+...+..+.|+|
T Consensus 119 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~ 198 (396)
T 3c5m_A 119 TVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPF 198 (396)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETT
T ss_pred ecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCC
Confidence 333332222 3456777766554 356689999999988777777778899999999
Q ss_pred CCCEEEEEEcC------CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcc
Q 006743 133 DDWILTAGTSN------GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMP 206 (633)
Q Consensus 133 dG~~LatGs~D------GsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIW 206 (633)
++..|+..+.+ ..|++||+.+.. ...+........+..++|+|+|++|+..+...+ ..++.|++|
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~-------~~~~~l~~~ 269 (396)
T 3c5m_A 199 DDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKG-------QTDRVIYKA 269 (396)
T ss_dssp EEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEECTTSSCEEEEEEETT-------TCCEEEEEE
T ss_pred CCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccccceEECCCCCEEEEEecCCC-------CccceEEEE
Confidence 78877766543 368899987652 122221111235888999999887765422111 112448889
Q ss_pred CCCC
Q 006743 207 DPLP 210 (633)
Q Consensus 207 Dlr~ 210 (633)
|+..
T Consensus 270 d~~~ 273 (396)
T 3c5m_A 270 NPET 273 (396)
T ss_dssp CTTT
T ss_pred ECCC
Confidence 8753
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.27 E-value=2.6e-11 Score=125.52 Aligned_cols=197 Identities=7% Similarity=-0.036 Sum_probs=130.2
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEE-------------------EEEccCCCeEEEEE-----e
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRV-------------------LDYSRNSRHLLVTA-----G 57 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~Vss-------------------LafSpdg~~lLaSG-----s 57 (633)
|+|||++|+.++.++.|++||+.+++....+..+. ..... ++|+|+++. ++.+ .
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~-~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~-~~~~~~~~~~ 165 (396)
T 3c5m_A 88 ISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDE-EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSW-EKFAEFYHTN 165 (396)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCT-TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH-HHHHHHHHTC
T ss_pred ECCCCCEEEEEEcCCcEEEEECCCCCcEEEEeccc-ccCCCCCEEEeccCCccccccccccccCCCCcc-eeeeeeccCC
Confidence 79999999999999999999998887665554322 22222 245666663 3322 4
Q ss_pred CCCeEEEEECCCCCceeEEeccCCCCeEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCCceeeEeeC--CCCeEEE
Q 006743 58 DDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS-DDKIIASVGLD------KKLYTYDPGSRRPSSCITY--EAPFSSL 128 (633)
Q Consensus 58 ~DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSP-dg~~LaSgS~D------GtVrIWDlrtgk~v~~i~h--~~~ItsL 128 (633)
.+..|++||+.+++. ..+..+...+..+.|+| +++.|+.++.+ ..|++||+..++......+ ...+..+
T Consensus 166 ~~~~l~~~d~~~g~~--~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 166 PTCRLIKVDIETGEL--EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHE 243 (396)
T ss_dssp CCEEEEEEETTTCCE--EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEE
T ss_pred CcceEEEEECCCCcE--EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccce
Confidence 567899999988763 34446777899999999 88877776653 3689999877654444332 2357889
Q ss_pred EEecCCCEEEEEEcC-----CeEEEEECCCCCCceEEEeecCCCCCeeEEEEcc-CCCeEEEeccCCCCeEE------EE
Q 006743 129 AFIDDDWILTAGTSN-----GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR-AKPVFIDETTCKAETAL------LG 196 (633)
Q Consensus 129 afSPdG~~LatGs~D-----GsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsP-dg~~Las~s~~sd~~lL------lS 196 (633)
+|+|||++|+.++.+ +.|++||+.++. ...+.. . .. .. +.|+| +|++++.... +..+. +.
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~-~--~~-~~-~~~s~~dg~~l~~~~~--~~p~~~~~~~~~~ 315 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETLE-NEEVMV-M--PP-CS-HLMSNFDGSLMVGDGC--DAPVDVADADSYN 315 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTTCC-EEEEEE-C--CS-EE-EEEECSSSSEEEEEEC--CC----------C
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCCCC-eEEeee-C--CC-CC-CCccCCCCceEEEecC--Ccceeeccccccc
Confidence 999999988776554 459999998763 222222 1 11 23 88999 8887765421 11000 01
Q ss_pred eeCCCeEEccCCCC
Q 006743 197 GAVGDSILMPDPLP 210 (633)
Q Consensus 197 gs~Dg~IkIWDlr~ 210 (633)
...+..|.+||+..
T Consensus 316 ~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 316 IENDPFLYVLNTKA 329 (396)
T ss_dssp CCCCCEEEEEETTT
T ss_pred cCCCCcEEEEeccc
Confidence 12357888898753
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.25 E-value=3e-10 Score=129.88 Aligned_cols=190 Identities=10% Similarity=0.056 Sum_probs=127.3
Q ss_pred CccCCCCEEEEEECCC-----cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCe--------------
Q 006743 1 MYNCKDEHLASISLSG-----DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT-------------- 61 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG-----~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGt-------------- 61 (633)
+|+|||++||.+..++ .|++||+.+++.+....... .+..++|+||++ .|+.+..++.
T Consensus 131 ~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~--~~~~~~wspDg~-~l~~~~~~~~~~~~~~~~~~~~~~ 207 (710)
T 2xdw_A 131 AFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV--KFSCMAWTHDGK-GMFYNAYPQQDGKSDGTETSTNLH 207 (710)
T ss_dssp EECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE--CSCCEEECTTSS-EEEEEECCCCSSCCSSSCCCCCCC
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc--ccceEEEEeCCC-EEEEEEECCccccccccccccCCC
Confidence 4899999998776543 89999999988765432211 145689999998 5666666554
Q ss_pred --EEEEECCCCCce-eEEe--ccCCCCeEEEEEcCCCCEEEEEeC-----CCeEEEEeCCC------C--ceeeEeeCCC
Q 006743 62 --LHLWDTTGRSPK-VSWL--KQHSAPTAGISFSSDDKIIASVGL-----DKKLYTYDPGS------R--RPSSCITYEA 123 (633)
Q Consensus 62 --I~IWDl~t~~~~-v~~l--~~H~~~VtsLafSPdg~~LaSgS~-----DGtVrIWDlrt------g--k~v~~i~h~~ 123 (633)
|++|++.+.... .... ..|...+..+.|+||+++|+.++. +..|++||+.+ + .......+..
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~ 287 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE 287 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS
T ss_pred CEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC
Confidence 999999876532 1222 235566889999999999988765 56899999986 4 3333444555
Q ss_pred CeEEEEEecCCCEEEEEEcC----CeEEEEECCCCCC-ceEEEeecCCCC--CeeEEEEccCCCeEEEeccCCCCeEEEE
Q 006743 124 PFSSLAFIDDDWILTAGTSN----GRVVFYDIRGKPQ-PLTVLRACSSSE--AVSSLCWQRAKPVFIDETTCKAETALLG 196 (633)
Q Consensus 124 ~ItsLafSPdG~~LatGs~D----GsV~IWDlrs~~k-~v~~l~~~~H~~--~VtsLafsPdg~~Las~s~~sd~~lLlS 196 (633)
.+.. .|+++|..|+..+.+ +.|++||+.+... ....+. .|.. .+..++|.++ +.++++
T Consensus 288 ~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~------------~~lv~~ 352 (710)
T 2xdw_A 288 GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV--PEHEKDVLEWVACVRS------------NFLVLC 352 (710)
T ss_dssp SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--CCCSSCEEEEEEEETT------------TEEEEE
T ss_pred cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc--CCCCCCeEEEEEEEcC------------CEEEEE
Confidence 5554 588999888876653 3699999987632 223333 3333 6778888753 344445
Q ss_pred eeCCCe--EEccCC
Q 006743 197 GAVGDS--ILMPDP 208 (633)
Q Consensus 197 gs~Dg~--IkIWDl 208 (633)
...|+. |.+||+
T Consensus 353 ~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 353 YLHDVKNTLQLHDL 366 (710)
T ss_dssp EEETTEEEEEEEET
T ss_pred EEECCEEEEEEEEC
Confidence 555664 444554
No 178
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.24 E-value=9.8e-11 Score=126.40 Aligned_cols=169 Identities=8% Similarity=0.004 Sum_probs=128.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-----------eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGA-----------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG 69 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk-----------~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t 69 (633)
++++...++++|+.+ .+.+|++.+.. ....+. ... |+.|+| ++. +|+++ .++.|++||+..
T Consensus 44 ais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~--lp~-V~~l~f--d~~-~L~v~-~~~~l~v~dv~s 115 (388)
T 1xip_A 44 DISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKE--IPD-VIFVCF--HGD-QVLVS-TRNALYSLDLEE 115 (388)
T ss_dssp EEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEE--CTT-EEEEEE--ETT-EEEEE-ESSEEEEEESSS
T ss_pred EEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEee--CCC-eeEEEE--CCC-EEEEE-cCCcEEEEEchh
Confidence 357788899999887 56669875432 112232 334 889999 666 77777 889999999987
Q ss_pred CCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEE
Q 006743 70 RSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFY 149 (633)
Q Consensus 70 ~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IW 149 (633)
... ......|...|.++.+.+. .++++..||.|.+||+.++.... +...|.|++|+|+| ++.|..||.|++|
T Consensus 116 l~~-~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~ 187 (388)
T 1xip_A 116 LSE-FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQSF 187 (388)
T ss_dssp TTC-EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSCEEEE
T ss_pred hhc-cCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCcEEEE
Confidence 663 4456677888998888754 38999999999999999887654 34689999999999 7889999999999
Q ss_pred ECCCCCCc-eEEEee-------cCCCCCeeEEEEccCCCeEEEe
Q 006743 150 DIRGKPQP-LTVLRA-------CSSSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 150 Dlrs~~k~-v~~l~~-------~~H~~~VtsLafsPdg~~Las~ 185 (633)
+....... .+.+.. .+|...|.+|+|.+++.++++.
T Consensus 188 ~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 188 AWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 98876310 233311 1478899999999999998864
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.23 E-value=2.1e-10 Score=117.38 Aligned_cols=177 Identities=14% Similarity=0.202 Sum_probs=116.7
Q ss_pred CccCCCCEEEEEECC---C--cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeC-----------------
Q 006743 1 MYNCKDEHLASISLS---G--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD----------------- 58 (633)
Q Consensus 1 AFSpdG~~LaSgs~D---G--~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~----------------- 58 (633)
+|+|||++|+.++.+ + .|++||+.+++....... . . +..++|+|+++.+++++..
T Consensus 65 ~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 65 RISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-K-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp EECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-S-E-EEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred EECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-C-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 489999999987654 3 488889887766554443 2 3 8889999999844444322
Q ss_pred ---------CCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCC---------eEEEEeCCCCceeeEee
Q 006743 59 ---------DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDK---------KLYTYDPGSRRPSSCIT 120 (633)
Q Consensus 59 ---------DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DG---------tVrIWDlrtgk~v~~i~ 120 (633)
...|++||+.+++. +..+.. . .+..++|+|++ +++++..+. .|+++| +++......
T Consensus 142 ~g~~~~~~~~~~l~~~d~~~~~~-~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~ 215 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTESEEV-IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFE 215 (347)
T ss_dssp --------CEEEEEEEETTTTEE-EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEE
T ss_pred cCcccccCccceEEEEECCCCeE-EeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEecc
Confidence 25799999987763 133333 3 78899999999 777776542 455566 555544444
Q ss_pred CCCCeEEEEEecCCCEEEEEEcC--------CeEEEEECCCCCCceEEEeecCCCCCeeE-EEEccCCCeEEEeccCCCC
Q 006743 121 YEAPFSSLAFIDDDWILTAGTSN--------GRVVFYDIRGKPQPLTVLRACSSSEAVSS-LCWQRAKPVFIDETTCKAE 191 (633)
Q Consensus 121 h~~~ItsLafSPdG~~LatGs~D--------GsV~IWDlrs~~k~v~~l~~~~H~~~Vts-LafsPdg~~Las~s~~sd~ 191 (633)
+ ..+..+ +|||++|+.++.+ ..|++|| ++ +. ..+. ..|...+.. +.|+ ++
T Consensus 216 ~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-~~-~~l~-~~~~~~~~~~~~~s-dg------------ 274 (347)
T 2gop_A 216 K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK-EV-MGIL-DEVDRGVGQAKIKD-GK------------ 274 (347)
T ss_dssp E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS-CE-EESS-TTCCSEEEEEEEET-TE------------
T ss_pred C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC-ce-Eecc-ccCCcccCCccEEc-Cc------------
Confidence 4 455544 9999998877754 4688888 33 22 2221 245667775 7776 54
Q ss_pred eEEEEeeCCCeEEccCCC
Q 006743 192 TALLGGAVGDSILMPDPL 209 (633)
Q Consensus 192 ~lLlSgs~Dg~IkIWDlr 209 (633)
+++.+..++.+++| +.
T Consensus 275 -~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 275 -VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp -EEEEEEETTEEEEE-EE
T ss_pred -EEEEEecCCcEEEE-Ec
Confidence 34444567788888 65
No 180
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.23 E-value=1.2e-09 Score=107.83 Aligned_cols=191 Identities=8% Similarity=0.019 Sum_probs=134.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+++++|+.+++.. ++.|.+||..... ...+.......+..+++.+++. ++++...++.|.+|+..+... .......
T Consensus 73 ~~~~~g~l~v~~~-~~~i~~~d~~~~~-~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~-~~~~~~~ 148 (270)
T 1rwi_B 73 AVDGAGTVYVTDF-NNRVVTLAAGSNN-QTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQ-TVLPFTG 148 (270)
T ss_dssp EECTTCCEEEEET-TTEEEEECTTCSC-CEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSC-EECCCCS
T ss_pred EECCCCCEEEEcC-CCEEEEEeCCCce-EeeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCcee-Eeecccc
Confidence 3677888555544 8899999976543 3334322335678899999987 777777789999998655442 2222233
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~ 159 (633)
...+.+++++++++++++...++.|.+||.......... .....+.+++++++|.++++...++.|++||...... .
T Consensus 149 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~--~ 226 (270)
T 1rwi_B 149 LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS--T 226 (270)
T ss_dssp CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC--E
T ss_pred CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc--e
Confidence 346789999999997777777889999999876654332 2336789999999997777777788999999976532 1
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 160 ~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
. ....+...+.+++++++| .++++...++.|+++++..
T Consensus 227 ~-~~~~~~~~p~~i~~~~~g------------~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 227 V-LPFTGLNTPLAVAVDSDR------------TVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp E-CCCCSCSCEEEEEECTTC------------CEEEEEGGGTEEEEECCCG
T ss_pred e-eccCCCCCceeEEECCCC------------CEEEEECCCCEEEEEcCCC
Confidence 1 111334578899998854 3455556789999998753
No 181
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.20 E-value=7.9e-10 Score=112.90 Aligned_cols=171 Identities=9% Similarity=-0.021 Sum_probs=129.0
Q ss_pred CCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC-CC
Q 006743 4 CKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH-SA 82 (633)
Q Consensus 4 pdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H-~~ 82 (633)
..++.|++++.++.|++||.++|+.+.++..+....+.++.+.|+|+ +|+ +.++.|+.||. +++. +-.+..+ ..
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~-~W~~~~~~~~ 77 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRE-LWNIAAPAGC 77 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCE-EEEEECCTTC
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCE-EEEEcCCCCc
Confidence 34788999999999999999999999999864434567889999997 666 45788999999 5553 4444443 35
Q ss_pred CeEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCceeeEeeCC-------CCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 006743 83 PTAGISFSSDDKIIASVGL-DKKLYTYDPGSRRPSSCITYE-------APFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (633)
Q Consensus 83 ~VtsLafSPdg~~LaSgS~-DGtVrIWDlrtgk~v~~i~h~-------~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~ 154 (633)
.+.++.+.++|+++++.+. ++.|..+|. +++.+..+... .....+++.++|++|++...++.|++||.. +
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C
Confidence 7889999999999999887 788888886 67766655311 234556788999999999999999999998 5
Q ss_pred CCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006743 155 PQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 155 ~k~v~~l~~~~H~~~VtsLafsPdg~~Las~ 185 (633)
+.+..+. ....+.++.+.++|++++++
T Consensus 156 -~~~w~~~---~~~~~~~~~~~~~g~~~v~~ 182 (276)
T 3no2_A 156 -QLLNSVK---LSGTPFSSAFLDNGDCLVAC 182 (276)
T ss_dssp -CEEEEEE---CSSCCCEEEECTTSCEEEEC
T ss_pred -CEEEEEE---CCCCccceeEcCCCCEEEEe
Confidence 3334444 23456677777877766654
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.19 E-value=4.3e-10 Score=114.88 Aligned_cols=188 Identities=12% Similarity=0.116 Sum_probs=133.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+|++++..++....++.++.| .++....+.. +...+.+++|+++++ +++++..++.|++||..+++. ......+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~-~~~~~~~ 85 (333)
T 2dg1_A 12 FYSGKSNSAVPIISESELQTI---TAEPWLEISK-KGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEI-KRPFVSH 85 (333)
T ss_dssp CSCGGGGCSSCCCCGGGSCEE---ECEEEEEEES-SCCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCE-EEEEECS
T ss_pred eecCCccceeEEeecccCccc---ccceeEEEec-cCccccCcEECCCCC-EEEEECCCCEEEEEeCCCCcE-EEEeeCC
Confidence 467777777777778888999 3455556654 334568899999987 777888899999999987763 2223356
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCceeeEee---CCCCeEEEEEecCCCEEEEEEc------CCeEE
Q 006743 81 SAPTAGISFSSDDKIIASVGLD----KKLYTYDPGSRRPSSCIT---YEAPFSSLAFIDDDWILTAGTS------NGRVV 147 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~D----GtVrIWDlrtgk~v~~i~---h~~~ItsLafSPdG~~LatGs~------DGsV~ 147 (633)
...+.+++|+++++++++...+ +.|.+||..+++....+. ....+.+++++|+|+++++... .+.|+
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEE
Confidence 6789999999999988887766 689999998877653332 4457999999999987776653 35677
Q ss_pred EEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 148 FYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 148 IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
.||..+.. . ..+. .+...+.+++|+|++++++ ++...++.|.+||+.
T Consensus 166 ~~~~~~~~-~-~~~~--~~~~~~~~i~~~~dg~~l~-----------v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 166 YVSPDFRT-V-TPII--QNISVANGIALSTDEKVLW-----------VTETTANRLHRIALE 212 (333)
T ss_dssp EECTTSCC-E-EEEE--EEESSEEEEEECTTSSEEE-----------EEEGGGTEEEEEEEC
T ss_pred EEeCCCCE-E-EEee--cCCCcccceEECCCCCEEE-----------EEeCCCCeEEEEEec
Confidence 77766542 2 2222 1234578899999765443 333446778888774
No 183
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.18 E-value=9.5e-10 Score=114.16 Aligned_cols=189 Identities=8% Similarity=0.004 Sum_probs=130.8
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEEEeCCCC----CcEEEEEEccCCCeEEEEEe-CCCeEEEEECCCCCceeE
Q 006743 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNE----QVLRVLDYSRNSRHLLVTAG-DDGTLHLWDTTGRSPKVS 75 (633)
Q Consensus 2 FSpdG~~LaSgs-~DG~I~IWDl~tgk~v~~~~~~~~----~~VssLafSpdg~~lLaSGs-~DGtI~IWDl~t~~~~v~ 75 (633)
++++| .++++. .++.|.+||..+++....+..... .....+++ . +..++++.. .++.|.+||..+.+. +.
T Consensus 91 ~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~-~~ 166 (328)
T 3dsm_A 91 FLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKV-VD 166 (328)
T ss_dssp EEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEE-EE
T ss_pred EeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeE-EE
Confidence 56777 455555 789999999999988877764321 03345667 3 443555544 489999999988763 33
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCC----------CeEEEEeCCCCceeeEeeC--CCCeEEEEEecCCCEEEEEEcC
Q 006743 76 WLKQHSAPTAGISFSSDDKIIASVGLD----------KKLYTYDPGSRRPSSCITY--EAPFSSLAFIDDDWILTAGTSN 143 (633)
Q Consensus 76 ~l~~H~~~VtsLafSPdg~~LaSgS~D----------GtVrIWDlrtgk~v~~i~h--~~~ItsLafSPdG~~LatGs~D 143 (633)
.+.. .....+++++|++++++++..+ +.|.+||..+++....+.. ......++|+|+++.|+++..
T Consensus 167 ~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 167 ELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp EEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-
T ss_pred EEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-
Confidence 3333 3446789999999877776655 7899999999988766643 447899999999999988765
Q ss_pred CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEe----eCCCeEEccCCC
Q 006743 144 GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGG----AVGDSILMPDPL 209 (633)
Q Consensus 144 GsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSg----s~Dg~IkIWDlr 209 (633)
.|++||..+.+.....+. ..+.....+++++|++ +.++++. ..++.|.+||..
T Consensus 245 -~v~~~d~~t~~~~~~~~~-~~~~~~p~gi~vdp~~-----------g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 -DIWRMPVEADRVPVRPFL-EFRDTKYYGLTVNPNN-----------GEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp -SEEEEETTCSSCCSSCSB-CCCSSCEEEEEECTTT-----------CCEEEEECTTSSSEEEEEEECTT
T ss_pred -EEEEEECCCCceeeeeee-cCCCCceEEEEEcCCC-----------CeEEEEcccccccCCEEEEECCC
Confidence 899999987642111110 0124678899999853 3334444 446788888875
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.17 E-value=2.8e-09 Score=108.81 Aligned_cols=200 Identities=13% Similarity=0.046 Sum_probs=146.1
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeC-CCeEEEEECCCCCceeEEec--
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-DGTLHLWDTTGRSPKVSWLK-- 78 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~-DGtI~IWDl~t~~~~v~~l~-- 78 (633)
+.|+|++|+ +.++.|+.||. +++.+..+..+....+.++.+.++|+ ++++.+. ++.|..+|..+.. +..+.
T Consensus 44 ~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~~Gk~--l~~~~~~ 117 (276)
T 3no2_A 44 ATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGN-ALVAWCGHPSTILEVNMKGEV--LSKTEFE 117 (276)
T ss_dssp ECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSC-EEEEEESTTEEEEEECTTSCE--EEEEEEC
T ss_pred ECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCC-EEEEecCCCCEEEEEeCCCCE--EEEEecc
Confidence 578999888 45788999998 89999999865445678889999998 6777666 7788888864432 22222
Q ss_pred ----cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 006743 79 ----QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (633)
Q Consensus 79 ----~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~ 154 (633)
.+......+++.++++++++...++.|..||.. ++.+..+.....+.++...++|++++++..+++|..+|..++
T Consensus 118 ~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 118 TGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp CSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTC
T ss_pred CCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCC
Confidence 122345567788999999999999999999998 998888876667778888999999999999999999999977
Q ss_pred CCceEEEeecC----CCCCeeEEEEccCCCeEEEeccCC-------CCeEEEEeeCCCeEEccCCCC
Q 006743 155 PQPLTVLRACS----SSEAVSSLCWQRAKPVFIDETTCK-------AETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 155 ~k~v~~l~~~~----H~~~VtsLafsPdg~~Las~s~~s-------d~~lLlSgs~Dg~IkIWDlr~ 210 (633)
+ .+..+.... .-..+.+++..++|..+++..... +...++--..++.+ +|....
T Consensus 197 ~-~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~-~W~~~~ 261 (276)
T 3no2_A 197 R-IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKV-VWQLND 261 (276)
T ss_dssp C-EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBE-EEEECC
T ss_pred c-EEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCE-EEEecC
Confidence 4 333333111 123378899999999988874221 12344445557776 676543
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.16 E-value=7.3e-10 Score=126.55 Aligned_cols=192 Identities=11% Similarity=0.006 Sum_probs=127.2
Q ss_pred CccCCCCEEEEE-----ECCCcEEEEECCCCcee-EEEeCCCCCcEEEEEEccCCCeEEEEEeCCCe-------------
Q 006743 1 MYNCKDEHLASI-----SLSGDLILHNLASGAKA-AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT------------- 61 (633)
Q Consensus 1 AFSpdG~~LaSg-----s~DG~I~IWDl~tgk~v-~~~~~~~~~~VssLafSpdg~~lLaSGs~DGt------------- 61 (633)
+|+|||++||.+ +.+..|++||+.+++.+ ....... ....++|+|+|+ .|+.++.|..
T Consensus 127 ~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~--~~~~~~wspDg~-~l~~~~~d~~~~~~~~~~~~~~~ 203 (695)
T 2bkl_A 127 AVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG--KYATPKWTPDSK-GFYYEWLPTDPSIKVDERPGYTT 203 (695)
T ss_dssp EECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC--TTCCCEECTTSS-EEEEEECCCCTTSCGGGGGGGCE
T ss_pred EECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc--cccceEEecCCC-EEEEEEecCCCCCccccCCCCCE
Confidence 489999999843 33468999999998765 2111111 114689999998 6777777665
Q ss_pred EEEEECCCCCce---eEEeccCCCCeEEEEEcCCCCEEEEEeCCC----eEEEEeCCCCceeeEeeCCCCeEEEEEecCC
Q 006743 62 LHLWDTTGRSPK---VSWLKQHSAPTAGISFSSDDKIIASVGLDK----KLYTYDPGSRRPSSCITYEAPFSSLAFIDDD 134 (633)
Q Consensus 62 I~IWDl~t~~~~---v~~l~~H~~~VtsLafSPdg~~LaSgS~DG----tVrIWDlrtgk~v~~i~h~~~ItsLafSPdG 134 (633)
|++|++.+.... +.....|...+..+.|+|||++|+.++.++ .|++||..+++......+...+....| ++|
T Consensus 204 v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g 282 (695)
T 2bkl_A 204 IRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKD 282 (695)
T ss_dssp EEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETT
T ss_pred EEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCC
Confidence 999999876521 222234556889999999999998887766 788888777766666666666777777 566
Q ss_pred CEEEEEE---cCCeEEEEECCCCCC-ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 135 WILTAGT---SNGRVVFYDIRGKPQ-PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 135 ~~LatGs---~DGsV~IWDlrs~~k-~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
.+++... .++.|++||+.+... ....+........|..++|. ++.++++...|+..++|.+.
T Consensus 283 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-------------~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 283 RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-------------GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-------------TTEEEEEEEETTEEEEEEEE
T ss_pred cEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-------------CCEEEEEEEECCEEEEEEEe
Confidence 6444443 258899999987632 12233311124456777765 33455556667777777543
No 186
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.16 E-value=1.7e-09 Score=114.14 Aligned_cols=173 Identities=12% Similarity=0.079 Sum_probs=115.5
Q ss_pred CccCCCCEEEEEEC--CCcEEEEECCCCceeEE-EeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC--------
Q 006743 1 MYNCKDEHLASISL--SGDLILHNLASGAKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG-------- 69 (633)
Q Consensus 1 AFSpdG~~LaSgs~--DG~I~IWDl~tgk~v~~-~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t-------- 69 (633)
+|+|||++|+++.. ++.|.+||+.+++.+.. +.. ... ..+.+.|++...+++.+.||.+.+|++..
T Consensus 114 ~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~--~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~ 190 (361)
T 2oiz_A 114 RQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA--AGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQS 190 (361)
T ss_dssp EECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG--TTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEE
T ss_pred EECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC--CCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeec
Confidence 47899999998864 58999999999988877 542 111 11334454433455555555555555432
Q ss_pred ----------------------------------------CCcee-EEecc------C----CCCeEEEEEcCCCCEEEE
Q 006743 70 ----------------------------------------RSPKV-SWLKQ------H----SAPTAGISFSSDDKIIAS 98 (633)
Q Consensus 70 ----------------------------------------~~~~v-~~l~~------H----~~~VtsLafSPdg~~LaS 98 (633)
....+ ..+.. + ......++|+|+++++++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv 270 (361)
T 2oiz_A 191 RSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYV 270 (361)
T ss_dssp ECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEE
T ss_pred cccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEE
Confidence 11100 00000 0 001112688998888777
Q ss_pred EeC-----------CCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCC-CceEEEeecCC
Q 006743 99 VGL-----------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKP-QPLTVLRACSS 166 (633)
Q Consensus 99 gS~-----------DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~-k~v~~l~~~~H 166 (633)
+.. .+.|.+||+.+++.+..+.... +.+++|+|||++|++++. +.|.+||..+.. +.+..+ ..+
T Consensus 271 ~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i--~~~ 346 (361)
T 2oiz_A 271 FMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI--EGA 346 (361)
T ss_dssp EEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE--TTS
T ss_pred EEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe--ccC
Confidence 643 3489999999999998887555 999999999999998887 999999998862 222222 256
Q ss_pred CCCeeEEEEccCCC
Q 006743 167 SEAVSSLCWQRAKP 180 (633)
Q Consensus 167 ~~~VtsLafsPdg~ 180 (633)
......++++|+|.
T Consensus 347 G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 347 AEASLQVQFHPVGG 360 (361)
T ss_dssp CSSEEEEEECCCSC
T ss_pred CCCcEEEEecCCCC
Confidence 77889999999864
No 187
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.16 E-value=1.8e-09 Score=114.07 Aligned_cols=189 Identities=7% Similarity=0.055 Sum_probs=117.6
Q ss_pred CccCCCCEEEEEE----------CCCcEEEEECCCCceeEEEeCC-----CCCcEEEEEEccCCCeEEEEEe-C-CCeEE
Q 006743 1 MYNCKDEHLASIS----------LSGDLILHNLASGAKAAELKDP-----NEQVLRVLDYSRNSRHLLVTAG-D-DGTLH 63 (633)
Q Consensus 1 AFSpdG~~LaSgs----------~DG~I~IWDl~tgk~v~~~~~~-----~~~~VssLafSpdg~~lLaSGs-~-DGtI~ 63 (633)
+|+|||++|+++. .++.|.+||..+++.+..+... +......++++|+|+ +|+++. . ++.|.
T Consensus 56 ~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~ 134 (361)
T 2oiz_A 56 QVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGK-FIVLQNASPATSIG 134 (361)
T ss_dssp EECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSS-EEEEEEESSSEEEE
T ss_pred EECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCC-EEEEECCCCCCeEE
Confidence 5899999999886 3567999999999988887632 122345689999998 555554 3 68999
Q ss_pred EEECCCCCceeEE-eccCCCCeEEEEEcCCC-CEEEEEeCC---------------------------------------
Q 006743 64 LWDTTGRSPKVSW-LKQHSAPTAGISFSSDD-KIIASVGLD--------------------------------------- 102 (633)
Q Consensus 64 IWDl~t~~~~v~~-l~~H~~~VtsLafSPdg-~~LaSgS~D--------------------------------------- 102 (633)
+||+.+.+. +.. +. +.. ...+.+.|++ ..+++.+.|
T Consensus 135 v~d~~~~~~-~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 211 (361)
T 2oiz_A 135 IVDVAKGDY-VEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDK 211 (361)
T ss_dssp EEETTTTEE-EEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECS
T ss_pred EEECCCCcE-EEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccC
Confidence 999988763 333 22 111 1112333322 333333444
Q ss_pred ---------CeEEEEeCCCCcee--eEee-------C----CCCeEEEEEecCCCEEEEEEc-----------CCeEEEE
Q 006743 103 ---------KKLYTYDPGSRRPS--SCIT-------Y----EAPFSSLAFIDDDWILTAGTS-----------NGRVVFY 149 (633)
Q Consensus 103 ---------GtVrIWDlrtgk~v--~~i~-------h----~~~ItsLafSPdG~~LatGs~-----------DGsV~IW 149 (633)
+.|.++|+..+... ..+. . ......++++|+++.++++.. .+.|.+|
T Consensus 212 ~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~vi 291 (361)
T 2oiz_A 212 DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVM 291 (361)
T ss_dssp SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEE
T ss_pred CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEE
Confidence 44444444332211 1100 0 011112789999888887654 3489999
Q ss_pred ECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 150 Dlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
|+.+. +.+..+. .+. +.+++|+|+|++|+++ .. +.|.+||+...
T Consensus 292 D~~t~-~~v~~i~--~~~--p~~ia~spdg~~l~v~------------n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 292 DTKTK-QRVARIP--GRD--ALSMTIDQQRNLMLTL------------DG-GNVNVYDISQP 335 (361)
T ss_dssp ETTTT-EEEEEEE--CTT--CCEEEEETTTTEEEEE------------CS-SCEEEEECSSS
T ss_pred ECCCC-cEEEEEe--cCC--eeEEEECCCCCEEEEe------------CC-CeEEEEECCCC
Confidence 99987 4455554 344 9999999987665543 33 88889988654
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.14 E-value=2.6e-09 Score=105.27 Aligned_cols=189 Identities=12% Similarity=0.053 Sum_probs=127.3
Q ss_pred CccCCCCEEE-EEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-
Q 006743 1 MYNCKDEHLA-SISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK- 78 (633)
Q Consensus 1 AFSpdG~~La-Sgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~- 78 (633)
+++++|+.++ +...++.|.+||..+... ..+.......+.+|++.+++. ++++.. ++.|.+||..+... ..+.
T Consensus 30 ~~~~~g~l~v~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~~~--~~~~~ 104 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGMYGRVVKLATGSTGT-TVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSNNQ--TVLPF 104 (270)
T ss_dssp EECTTCCEEEEECSSSCEEEEECC------EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEEECTTCSCC--EECCC
T ss_pred EECCCCCEEEEccCCCCcEEEecCCCccc-ceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCceE--eeeec
Confidence 3578888666 446788999999755432 222222234466789999987 555555 89999999877652 2222
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc
Q 006743 79 QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (633)
Q Consensus 79 ~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~ 157 (633)
.....+.++++.++++++++...++.|.+||..+....... .....+.+++++++|+++++...++.|++||......
T Consensus 105 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~- 183 (270)
T 1rwi_B 105 DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ- 183 (270)
T ss_dssp CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE-
T ss_pred CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce-
Confidence 33367899999999998888778899999987665443322 2334678899999999777777789999999887532
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 158 v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
. .....+...+.+++++++| .++++...++.|.+||..
T Consensus 184 -~-~~~~~~~~~p~~i~~d~~g------------~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 184 -V-VLPFTDITAPWGIAVDEAG------------TVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp -E-ECCCSSCCSEEEEEECTTC------------CEEEEETTTSCEEEECTT
T ss_pred -E-eecccCCCCceEEEECCCC------------CEEEEECCCCcEEEEcCC
Confidence 1 1112333668899998854 334444557788888764
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.13 E-value=3e-09 Score=110.35 Aligned_cols=181 Identities=8% Similarity=0.000 Sum_probs=129.1
Q ss_pred CEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC-----
Q 006743 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS----- 81 (633)
Q Consensus 7 ~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~----- 81 (633)
+.+++...++.|.+||..+++.+..+.. ......+++++++. ++++...++.|.+||..+.+. ...+....
T Consensus 55 ~lyv~~~~~~~v~viD~~t~~~~~~i~~--~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~-~~~i~~g~~~~~~ 130 (328)
T 3dsm_A 55 IGWIVVNNSHVIFAIDINTFKEVGRITG--FTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEI-TGYIECPDMDMES 130 (328)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEEC--CSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEE-EEEEECTTCCTTT
T ss_pred EEEEEEcCCCEEEEEECcccEEEEEcCC--CCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeE-EEEEEcCCccccC
Confidence 3444455578999999999999888863 35567899988874 555555899999999988763 33333222
Q ss_pred CCeEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcC----------CeEEEE
Q 006743 82 APTAGISFSSDDKIIASVG--LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSN----------GRVVFY 149 (633)
Q Consensus 82 ~~VtsLafSPdg~~LaSgS--~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~D----------GsV~IW 149 (633)
.....+++ ++..++++. .++.|.+||+.+++.+..+........++++|+|++++++..+ +.|++|
T Consensus 131 ~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~i 208 (328)
T 3dsm_A 131 GSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRI 208 (328)
T ss_dssp CBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEE
T ss_pred CCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEE
Confidence 14567777 345555554 4889999999999988887766677889999999877776655 789999
Q ss_pred ECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 150 Dlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
|..+. +....+.. ........++|+|+++.+... +..|.+||+.
T Consensus 209 d~~t~-~v~~~~~~-~~g~~p~~la~~~d~~~lyv~--------------~~~v~~~d~~ 252 (328)
T 3dsm_A 209 DAETF-TVEKQFKF-KLGDWPSEVQLNGTRDTLYWI--------------NNDIWRMPVE 252 (328)
T ss_dssp ETTTT-EEEEEEEC-CTTCCCEEEEECTTSCEEEEE--------------SSSEEEEETT
T ss_pred ECCCC-eEEEEEec-CCCCCceeEEEecCCCEEEEE--------------ccEEEEEECC
Confidence 99876 33333332 123468999999987666554 1267778774
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.11 E-value=6.3e-09 Score=118.93 Aligned_cols=197 Identities=10% Similarity=0.061 Sum_probs=132.7
Q ss_pred CccCCCCEEEEEECCCc----------------EEEEECCCCcee--EEEeCC-CCCcEEEEEEccCCCeEEEEEeC---
Q 006743 1 MYNCKDEHLASISLSGD----------------LILHNLASGAKA--AELKDP-NEQVLRVLDYSRNSRHLLVTAGD--- 58 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~----------------I~IWDl~tgk~v--~~~~~~-~~~~VssLafSpdg~~lLaSGs~--- 58 (633)
+|+|||+.|+.+..++. |++|++.+++.. ..+... +...+..+.|+|+|+.++++...
T Consensus 177 ~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 256 (710)
T 2xdw_A 177 AWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD 256 (710)
T ss_dssp EECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS
T ss_pred EEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC
Confidence 48999999999888766 999999887632 233322 23446678999999944444431
Q ss_pred -CCeEEEEECCC------CCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCC----eEEEEeCCCCce---eeEeeCCC-
Q 006743 59 -DGTLHLWDTTG------RSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDK----KLYTYDPGSRRP---SSCITYEA- 123 (633)
Q Consensus 59 -DGtI~IWDl~t------~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DG----tVrIWDlrtgk~---v~~i~h~~- 123 (633)
+..|++||+.+ +......+..+...+.. .|+++++.|+..+.++ .|.+||+.++.. ...+.+..
T Consensus 257 ~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 335 (710)
T 2xdw_A 257 PVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK 335 (710)
T ss_dssp SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS
T ss_pred CccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCC
Confidence 57899999976 42224556666666655 4888888887766533 699999988642 33444433
Q ss_pred -CeEEEEEecCCCEEEEEEcCCe--EEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCC
Q 006743 124 -PFSSLAFIDDDWILTAGTSNGR--VVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVG 200 (633)
Q Consensus 124 -~ItsLafSPdG~~LatGs~DGs--V~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~D 200 (633)
.+..++|.+++.++++...|+. |++||+.+++ .+..+. .+.+.|..+.++|++..++.. .-+....
T Consensus 336 ~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~-~~~~l~--~~~~~v~~~~~s~d~~~l~~~--------~ss~~~P 404 (710)
T 2xdw_A 336 DVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA-LLKIFP--LEVGSVVGYSGQKKDTEIFYQ--------FTSFLSP 404 (710)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC-EEEEEC--CCSSEEEEEECCTTCSEEEEE--------EECSSCC
T ss_pred CeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC-EEEecC--CCCceEEEEecCCCCCEEEEE--------EeCCCCC
Confidence 6888999988888888888885 6667775553 334444 456778889998876554432 0111235
Q ss_pred CeEEccCCC
Q 006743 201 DSILMPDPL 209 (633)
Q Consensus 201 g~IkIWDlr 209 (633)
..|.+||+.
T Consensus 405 ~~i~~~d~~ 413 (710)
T 2xdw_A 405 GIIYHCDLT 413 (710)
T ss_dssp CEEEEEETT
T ss_pred CEEEEEECC
Confidence 678888874
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.11 E-value=3.4e-09 Score=106.91 Aligned_cols=173 Identities=11% Similarity=0.049 Sum_probs=118.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeC---CCCCcEEEEEEccCCCeEEEE----Ee-------------CCC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD---PNEQVLRVLDYSRNSRHLLVT----AG-------------DDG 60 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~---~~~~~VssLafSpdg~~lLaS----Gs-------------~DG 60 (633)
+|+++|+++++...++.|.+||..+++....... .....+..+++.++|+ ++++ |. ..+
T Consensus 75 ~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 75 CLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp EECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred eECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCc
Confidence 4678999877766678999999988875433221 1122345689999997 6665 32 134
Q ss_pred eEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCce---eeEe-eCCCCeEEEEEecCCC
Q 006743 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPG-SRRP---SSCI-TYEAPFSSLAFIDDDW 135 (633)
Q Consensus 61 tI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlr-tgk~---v~~i-~h~~~ItsLafSPdG~ 135 (633)
.|..|+.. +. ...+..+......++|+|+++.+++.+.++.|++||+. +++. ...+ .....+.+++++++|+
T Consensus 154 ~l~~~~~~-g~--~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~ 230 (296)
T 3e5z_A 154 WVFRLAPD-GT--LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL 230 (296)
T ss_dssp EEEEECTT-SC--EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC
T ss_pred EEEEECCC-CC--EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC
Confidence 56666655 33 34455666778999999999998777788999999997 4554 2222 2345677899999998
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEE-ccCCCeEEE
Q 006743 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCW-QRAKPVFID 184 (633)
Q Consensus 136 ~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLaf-sPdg~~Las 184 (633)
++++. ++.|++||... +.+..+. .+.. +.+++| .|+++.|+.
T Consensus 231 l~v~~--~~~v~~~~~~g--~~~~~~~--~~~~-~~~~~f~~~d~~~L~v 273 (296)
T 3e5z_A 231 IWASA--GDGVHVLTPDG--DELGRVL--TPQT-TSNLCFGGPEGRTLYM 273 (296)
T ss_dssp EEEEE--TTEEEEECTTS--CEEEEEE--CSSC-CCEEEEESTTSCEEEE
T ss_pred EEEEc--CCeEEEECCCC--CEEEEEE--CCCC-ceeEEEECCCCCEEEE
Confidence 66665 88999999873 3344444 3445 899999 465544433
No 192
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.11 E-value=2.7e-08 Score=98.63 Aligned_cols=187 Identities=9% Similarity=-0.016 Sum_probs=130.4
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~-~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
++++|+.+++...++.|..||.. ++. ..+.. .....+..+++.+++. ++++...++.|.+||. ++.........+
T Consensus 64 ~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~~ 139 (299)
T 2z2n_A 64 ISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIREYELPNK 139 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred ECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEEEecCCCC
Confidence 56788877776668889999975 433 33332 1345678899999886 6776667889999998 444222223345
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeE-e-eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC-I-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~-i-~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v 158 (633)
...+.++++.++++++++...++.|.+||. +++.... . .....+.+++++++|++.++...++.|.+||. +.. +
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~--~ 215 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE--I 215 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC--E
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc--E
Confidence 567899999999988887777889999999 6665543 2 23456889999999987777667889999999 442 2
Q ss_pred EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 159 TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 159 ~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
..+....+...+.+++++++|+..+ +...++.|.+||.
T Consensus 216 ~~~~~~~~~~~~~~i~~~~~g~l~v------------~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 216 TEFKIPTPNARPHAITAGAGIDLWF------------TEWGANKIGRLTS 253 (299)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEE------------EETTTTEEEEEET
T ss_pred EEEECCCCCCCceeEEECCCCCEEE------------eccCCceEEEECC
Confidence 3333334556788999988655333 3334566777765
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.10 E-value=3.4e-08 Score=97.93 Aligned_cols=188 Identities=10% Similarity=0.019 Sum_probs=129.8
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~ 81 (633)
++++|+.+++...++.|.+||.. ++............+..+++.+++. ++++...++.|..||... ......+....
T Consensus 22 ~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~ 98 (299)
T 2z2n_A 22 VSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-VWFTENAANKIGRITKKG-IIKEYTLPNPD 98 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTS-CEEEEECSSTT
T ss_pred ECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-EEEeCCCCCeEEEECCCC-cEEEEeCCCcC
Confidence 56788877766567899999987 5443322122345678899999987 666666688999999863 32122222345
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006743 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (633)
Q Consensus 82 ~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i--~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~ 159 (633)
..+.++++.++++++++...++.|.+||. +++..... .....+.+++++++|+++++...++.|.+||. ++. +.
T Consensus 99 ~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~--~~ 174 (299)
T 2z2n_A 99 SAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGD--IT 174 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC--EE
T ss_pred CCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCc--EE
Confidence 67999999999988888878889999999 55544332 24467899999999988777777889999998 442 22
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 160 ~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
.+....+...+.++++++++.. +++...++.|.+||.
T Consensus 175 ~~~~~~~~~~~~~i~~~~~g~l------------~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 175 EFKIPTPASGPVGITKGNDDAL------------WFVEIIGNKIGRITT 211 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSSE------------EEEETTTTEEEEECT
T ss_pred EeeCCCCCCcceeEEECCCCCE------------EEEccCCceEEEECC
Confidence 2322234556888998886543 333344667777776
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.09 E-value=1.4e-08 Score=114.59 Aligned_cols=187 Identities=13% Similarity=0.135 Sum_probs=134.7
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC--CCCceeEEeccCCCC
Q 006743 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT--GRSPKVSWLKQHSAP 83 (633)
Q Consensus 6 G~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~--t~~~~v~~l~~H~~~ 83 (633)
+..+++...++.|.++|..+++.+..+.. ...+..+.|+|+++ ++++++.|+.|.+||+. +.+. +..+... ..
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~--g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~~t~~~-v~~i~~G-~~ 241 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDT--GYAVHISRLSASGR-YLFVIGRDGKVNMIDLWMKEPTT-VAEIKIG-SE 241 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSC-EEEEEETTSEEEEEETTSSSCCE-EEEEECC-SE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeC--CCCccceEECCCCC-EEEEEcCCCeEEEEECCCCCCcE-eEEEecC-CC
Confidence 34556667789999999999999988874 34566899999998 67788899999999995 5543 4445443 34
Q ss_pred eEEEEEc----CCCCEEEEEeC-CCeEEEEeCCCCceeeEeeC------------CCCeEEEEEecCCCEEE-EEEcCCe
Q 006743 84 TAGISFS----SDDKIIASVGL-DKKLYTYDPGSRRPSSCITY------------EAPFSSLAFIDDDWILT-AGTSNGR 145 (633)
Q Consensus 84 VtsLafS----Pdg~~LaSgS~-DGtVrIWDlrtgk~v~~i~h------------~~~ItsLafSPdG~~La-tGs~DGs 145 (633)
...++|+ |||+++++++. ++.|.++|..+.+.+..+.. ...+..+..++++..++ ....+|.
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 6899999 69998887765 48999999999988877642 12577888888765544 4556799
Q ss_pred EEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 146 VVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 146 V~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
|.++|....... .+.. ........++.|+|++++++.+. ..++.|.++|+..
T Consensus 322 v~~vd~~~~~~~-~v~~-i~~~~~~~d~~~~pdgr~~~va~-----------~~sn~V~ViD~~t 373 (567)
T 1qks_A 322 ILLVDYTDLNNL-KTTE-ISAERFLHDGGLDGSHRYFITAA-----------NARNKLVVIDTKE 373 (567)
T ss_dssp EEEEETTCSSEE-EEEE-EECCSSEEEEEECTTSCEEEEEE-----------GGGTEEEEEETTT
T ss_pred EEEEecCCCccc-eeee-eeccccccCceECCCCCEEEEEe-----------CCCCeEEEEECCC
Confidence 999999875321 2111 23445677889999877765442 2355566666553
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.07 E-value=5.8e-09 Score=106.66 Aligned_cols=158 Identities=12% Similarity=0.131 Sum_probs=109.1
Q ss_pred CccCCCCEEEEEECC---------------------------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEE
Q 006743 1 MYNCKDEHLASISLS---------------------------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLL 53 (633)
Q Consensus 1 AFSpdG~~LaSgs~D---------------------------G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lL 53 (633)
+|+|||++|+.++.+ ..|++||+.+++.+..+.. . .+..++|+|++ ++
T Consensus 110 ~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg--~~ 184 (347)
T 2gop_A 110 EWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK--IV 184 (347)
T ss_dssp EECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE--EE
T ss_pred eECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe--EE
Confidence 489999999887642 5799999988876455543 2 55678999998 66
Q ss_pred EEEeCCC-------eEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCC--------CeEEEEeCCCCceeeE
Q 006743 54 VTAGDDG-------TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD--------KKLYTYDPGSRRPSSC 118 (633)
Q Consensus 54 aSGs~DG-------tI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~D--------GtVrIWDlrtgk~v~~ 118 (633)
+++..++ ...||.+.+++ ...+..+ ..+..+ +|+|++|+.++.+ ..|++|| +++....
T Consensus 185 ~~~~~~~~~~~~~~~~~l~~~d~~~--~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 185 VNVPHREIIPQYFKFWDIYIWEDGK--EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp EEEECCCSSCCSSCCEEEEEEETTE--EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred EEEecccccccccccccEEEeCCCc--eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 6665542 33444444333 3444444 555544 8999998887754 3788888 5555444
Q ss_pred ee-CCCCeEE-EEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEcc
Q 006743 119 IT-YEAPFSS-LAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR 177 (633)
Q Consensus 119 i~-h~~~Its-LafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsP 177 (633)
.. +...+.. +.|+ |+ +++++..++.++|| +.++ +... +. .+.+.|.+++|+|
T Consensus 258 ~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g-~~~~-~~--~~~~~v~~~~~s~ 311 (347)
T 2gop_A 258 LDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG-EIKP-IA--KGRHWIMGFDVDE 311 (347)
T ss_dssp STTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS-SEEE-EE--CSSSEEEEEEESS
T ss_pred cccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC-ceEE-Ee--cCCCeEEeeeeeC
Confidence 43 4567776 9999 88 88899999999999 8743 3322 22 4577899999987
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.04 E-value=6.4e-09 Score=119.73 Aligned_cols=188 Identities=13% Similarity=-0.005 Sum_probs=122.4
Q ss_pred CccCCCCEEEEEECC-----CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC--------------e
Q 006743 1 MYNCKDEHLASISLS-----GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--------------T 61 (633)
Q Consensus 1 AFSpdG~~LaSgs~D-----G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DG--------------t 61 (633)
+|+|||++||.+..+ ..|++||+.+++.+.... ....+..++|+|+ + .|+.+..|+ .
T Consensus 169 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~--~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~~~~~~ 244 (741)
T 1yr2_A 169 AASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL--KWVKFSGLAWLGN-D-ALLYSRFAEPKEGQAFQALNYNQT 244 (741)
T ss_dssp EECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE--EEEESCCCEESTT-S-EEEEEECCCC--------CCCCCE
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC--CCceeccEEEECC-C-EEEEEEecCcccccccccCCCCCE
Confidence 489999999877643 359999999998765422 1111245789999 7 455555544 3
Q ss_pred EEEEECCCCCce-eEEec--cCCCCeEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCC--c-eeeEeeCCCCeEEEEE
Q 006743 62 LHLWDTTGRSPK-VSWLK--QHSAPTAGISFSSDDKIIASVGLDK-----KLYTYDPGSR--R-PSSCITYEAPFSSLAF 130 (633)
Q Consensus 62 I~IWDl~t~~~~-v~~l~--~H~~~VtsLafSPdg~~LaSgS~DG-----tVrIWDlrtg--k-~v~~i~h~~~ItsLaf 130 (633)
|++|++.+.... ..... .+...+..+.|+|||++|+..+.++ .|++||+.++ + ......+...+....
T Consensus 245 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~- 323 (741)
T 1yr2_A 245 VWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV- 323 (741)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-
T ss_pred EEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-
Confidence 999999766521 12222 2334689999999999988877554 8999999887 4 444444555555553
Q ss_pred ecCCCEEEEEEc----CCeEEEEECCCCC-CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEc
Q 006743 131 IDDDWILTAGTS----NGRVVFYDIRGKP-QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILM 205 (633)
Q Consensus 131 SPdG~~LatGs~----DGsV~IWDlrs~~-k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkI 205 (633)
.|+|+.|+..+. ++.|++||+.+.. ....++. .+...+..++|. ++.++++...|+..+|
T Consensus 324 ~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~~l~~~~~~-------------~~~lv~~~~~dg~~~l 388 (741)
T 1yr2_A 324 DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP--ESKDNLESVGIA-------------GNRLFASYIHDAKSQV 388 (741)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC--CCSSEEEEEEEE-------------BTEEEEEEEETTEEEE
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec--CCCCeEEEEEEE-------------CCEEEEEEEECCEEEE
Confidence 488998888775 3569999988742 2222332 344556566654 2345555566777666
Q ss_pred cCC
Q 006743 206 PDP 208 (633)
Q Consensus 206 WDl 208 (633)
|.+
T Consensus 389 ~~~ 391 (741)
T 1yr2_A 389 LAF 391 (741)
T ss_dssp EEE
T ss_pred EEE
Confidence 644
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.02 E-value=1.9e-08 Score=101.08 Aligned_cols=191 Identities=13% Similarity=0.143 Sum_probs=126.2
Q ss_pred CccCCCCEEEE-------EECCCcEEEEECCCCceeEEEe---CCCCCcEEEEEEccC-CCeEEEEEeCCCeEEEEECCC
Q 006743 1 MYNCKDEHLAS-------ISLSGDLILHNLASGAKAAELK---DPNEQVLRVLDYSRN-SRHLLVTAGDDGTLHLWDTTG 69 (633)
Q Consensus 1 AFSpdG~~LaS-------gs~DG~I~IWDl~tgk~v~~~~---~~~~~~VssLafSpd-g~~lLaSGs~DGtI~IWDl~t 69 (633)
+|+++|+.+++ +..++.|.+||..+++...... ..+...+..+++.++ ++ ++ .+..++.|.+||..
T Consensus 24 ~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~-v~~~~~~l~~~d~~- 100 (314)
T 1pjx_A 24 VFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LF-VADMRLGLLVVQTD- 100 (314)
T ss_dssp EECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EE-EEETTTEEEEEETT-
T ss_pred eECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EE-EEECCCCEEEEeCC-
Confidence 47788887777 5678899999988777543221 012345778999998 64 44 44445579999988
Q ss_pred CCceeEEe-cc-----CCCCeEEEEEcCCCCEEEEEeCC---------------CeEEEEeCCCCceeeEeeCCCCeEEE
Q 006743 70 RSPKVSWL-KQ-----HSAPTAGISFSSDDKIIASVGLD---------------KKLYTYDPGSRRPSSCITYEAPFSSL 128 (633)
Q Consensus 70 ~~~~v~~l-~~-----H~~~VtsLafSPdg~~LaSgS~D---------------GtVrIWDlrtgk~v~~i~h~~~ItsL 128 (633)
++ ...+ .. ....++++++.++++++++...+ +.|..||.. ++.............+
T Consensus 101 g~--~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i 177 (314)
T 1pjx_A 101 GT--FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGI 177 (314)
T ss_dssp SC--EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEE
T ss_pred CC--EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceE
Confidence 54 2333 21 12458899999999888877665 578888876 6555444445567899
Q ss_pred EEe----cCCCEEEEE-EcCCeEEEEECCCCCCc--eEEEee-cCCC-CCeeEEEEccCCCeEEEeccCCCCeEEEEeeC
Q 006743 129 AFI----DDDWILTAG-TSNGRVVFYDIRGKPQP--LTVLRA-CSSS-EAVSSLCWQRAKPVFIDETTCKAETALLGGAV 199 (633)
Q Consensus 129 afS----PdG~~LatG-s~DGsV~IWDlrs~~k~--v~~l~~-~~H~-~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~ 199 (633)
+|+ ++++.|+++ ..++.|++||+...... ...+.. ..+. ..+..++++++|+ ++++...
T Consensus 178 ~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~------------l~v~~~~ 245 (314)
T 1pjx_A 178 AVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN------------LLVANWG 245 (314)
T ss_dssp EEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC------------EEEEEET
T ss_pred EEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC------------EEEEEcC
Confidence 999 999766655 46789999998621111 112221 1333 5678888888554 3444445
Q ss_pred CCeEEccCCC
Q 006743 200 GDSILMPDPL 209 (633)
Q Consensus 200 Dg~IkIWDlr 209 (633)
++.|.+||..
T Consensus 246 ~~~i~~~d~~ 255 (314)
T 1pjx_A 246 SSHIEVFGPD 255 (314)
T ss_dssp TTEEEEECTT
T ss_pred CCEEEEEcCC
Confidence 7788889874
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.00 E-value=1e-07 Score=107.56 Aligned_cols=194 Identities=14% Similarity=0.090 Sum_probs=136.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECC--CCceeEEEeCCCCCcEEEEEEc----cCCCeEEEEEeCCCeEEEEECCCCCcee
Q 006743 1 MYNCKDEHLASISLSGDLILHNLA--SGAKAAELKDPNEQVLRVLDYS----RNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~--tgk~v~~~~~~~~~~VssLafS----pdg~~lLaSGs~DGtI~IWDl~t~~~~v 74 (633)
+|+|||+++++++.|+.|.+||+. +++.+..+.. ......++|+ |+|+.++++...+++|.|+|..+.+..
T Consensus 203 ~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~- 279 (567)
T 1qks_A 203 RLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK- 279 (567)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE-
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEE-
Confidence 489999999999999999999996 8888888874 3345679999 699966666677899999999887743
Q ss_pred EEecc----------C-CCCeEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCcee--eEeeCCCCeEEEEEecCCCEEEEE
Q 006743 75 SWLKQ----------H-SAPTAGISFSSDDK-IIASVGLDKKLYTYDPGSRRPS--SCITYEAPFSSLAFIDDDWILTAG 140 (633)
Q Consensus 75 ~~l~~----------H-~~~VtsLafSPdg~-~LaSgS~DGtVrIWDlrtgk~v--~~i~h~~~ItsLafSPdG~~LatG 140 (633)
..+.. | ...+..+..++++. +++....+|.|.++|..+.+.. ..+.......++.|+|+|++++++
T Consensus 280 ~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va 359 (567)
T 1qks_A 280 KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITA 359 (567)
T ss_dssp EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEE
T ss_pred EEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEE
Confidence 33221 2 12678888888655 4555667799999999876433 333456678889999999998776
Q ss_pred E-cCCeEEEEECCCCCCceEEEee---cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEee-CCCeEEccCCCC
Q 006743 141 T-SNGRVVFYDIRGKPQPLTVLRA---CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGA-VGDSILMPDPLP 210 (633)
Q Consensus 141 s-~DGsV~IWDlrs~~k~v~~l~~---~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs-~Dg~IkIWDlr~ 210 (633)
. .++.|.+||+.+. +.+..+.. ..|.+....+ ++|+ .+.++++.. .++.|.++|..+
T Consensus 360 ~~~sn~V~ViD~~t~-kl~~~i~vgg~~Phpg~g~~~-~~p~-----------~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 360 ANARNKLVVIDTKEG-KLVAIEDTGGQTPHPGRGANF-VHPT-----------FGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EGGGTEEEEEETTTT-EEEEEEECSSSSBCCTTCEEE-EETT-----------TEEEEEEEBSSSSEEEEEECCT
T ss_pred eCCCCeEEEEECCCC-cEEEEEeccCcCCCCccceee-ECCC-----------CCcEEEeCCCCCCeEEEecCCC
Confidence 6 5789999999987 34444432 1233222222 4564 233444443 468899998765
No 199
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.99 E-value=1.8e-07 Score=92.76 Aligned_cols=187 Identities=7% Similarity=-0.054 Sum_probs=128.0
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~-~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
+.++|+.+++...++.|..||.. ++.. .+.. .....+..+++.+++. ++++...++.|..||.. ++.....+...
T Consensus 69 ~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~ 144 (300)
T 2qc5_A 69 VSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIYEYDLPNK 144 (300)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECSST
T ss_pred ECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEEEccCCCC
Confidence 45778777666567889999987 5543 3332 1335678899999887 66666668899999987 44222223334
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 006743 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i--~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v 158 (633)
...+.++++.++++++++...++.|.+||. +++..... .....+.+++++++|.+.++....+.|.+||.. +. +
T Consensus 145 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~--~ 220 (300)
T 2qc5_A 145 GSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT-GE--I 220 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CC--E
T ss_pred CCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC-Cc--E
Confidence 567899999999997777766889999998 55554332 234568999999999877777677889999983 32 2
Q ss_pred EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 159 TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 159 ~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
..+....+...+.+++++++|+. +++...++.|.+||.
T Consensus 221 ~~~~~~~~~~~~~~i~~d~~g~l------------~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 221 SEYDIPTPNARPHAITAGKNSEI------------WFTEWGANQIGRITN 258 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCE------------EEEETTTTEEEEECT
T ss_pred EEEECCCCCCCceEEEECCCCCE------------EEeccCCCeEEEECC
Confidence 22322234567889999886543 333334567777765
No 200
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.98 E-value=2e-07 Score=92.31 Aligned_cols=188 Identities=8% Similarity=-0.045 Sum_probs=128.5
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~ 81 (633)
+.++|+.+++...++.|.+||.. ++............+..+++.+++. ++++...++.|.+||.. ++.....+....
T Consensus 27 ~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~ 103 (300)
T 2qc5_A 27 SSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD-IWFTENGANKIGKLSKK-GGFTEYPLPQPD 103 (300)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEECSSTT
T ss_pred ECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCC-EEEEecCCCeEEEECCC-CCeEEecCCCCC
Confidence 46778877766678999999987 5543321122235678899999887 66666667899999988 442222233344
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeE-ee-CCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006743 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC-IT-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (633)
Q Consensus 82 ~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~-i~-h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~ 159 (633)
..+.++++.++++++++...++.|..||.. ++.... .. ....+.+++++++|++.++...++.|..||. .+. +.
T Consensus 104 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~--~~ 179 (300)
T 2qc5_A 104 SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGK--LE 179 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC--EE
T ss_pred CCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCc--EE
Confidence 679999999999988887778899999988 655432 22 3467899999999996666666789999998 332 22
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 160 ~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
.+....+...+.++++++++...+ +....+.|.+||.
T Consensus 180 ~~~~~~~~~~~~~i~~d~~g~l~v------------~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 180 EYPLPTNAAAPVGITSGNDGALWF------------VEIMGNKIGRITT 216 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEE------------EETTTTEEEEECT
T ss_pred EeeCCCCCCCcceEEECCCCCEEE------------EccCCCEEEEEcC
Confidence 233223456688899888654433 3333556677765
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.97 E-value=6e-08 Score=97.41 Aligned_cols=188 Identities=15% Similarity=0.178 Sum_probs=123.3
Q ss_pred ccCC-CCEEEEEECCCcEEEEECCCCceeEE-EeC---CCCCcEEEEEEccCCCeEEEEEeCC---------------Ce
Q 006743 2 YNCK-DEHLASISLSGDLILHNLASGAKAAE-LKD---PNEQVLRVLDYSRNSRHLLVTAGDD---------------GT 61 (633)
Q Consensus 2 FSpd-G~~LaSgs~DG~I~IWDl~tgk~v~~-~~~---~~~~~VssLafSpdg~~lLaSGs~D---------------Gt 61 (633)
++++ |+ |..++.++.|.+||.. ++.... ... .....+.++++.++++ ++++...+ +.
T Consensus 78 ~~~~~g~-l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~ 154 (314)
T 1pjx_A 78 CDRDANQ-LFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGS 154 (314)
T ss_dssp ECSSSSE-EEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEE
T ss_pred EecCCCc-EEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCe
Confidence 5677 54 4445555589999987 654332 221 1123467899999987 56655544 56
Q ss_pred EEEEECCCCCceeEEeccCCCCeEEEEEc----CCCCEEEEE-eCCCeEEEEeCC-CCcee-----eEee-CC-CCeEEE
Q 006743 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFS----SDDKIIASV-GLDKKLYTYDPG-SRRPS-----SCIT-YE-APFSSL 128 (633)
Q Consensus 62 I~IWDl~t~~~~v~~l~~H~~~VtsLafS----Pdg~~LaSg-S~DGtVrIWDlr-tgk~v-----~~i~-h~-~~ItsL 128 (633)
|..||.. ++ ...+..+......++|+ ++++.++.+ ..++.|++||+. +++.. ..+. +. ..+..+
T Consensus 155 l~~~~~~-g~--~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i 231 (314)
T 1pjx_A 155 IYCFTTD-GQ--MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM 231 (314)
T ss_dssp EEEECTT-SC--EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE
T ss_pred EEEECCC-CC--EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCce
Confidence 7777765 33 23333344567899999 998765555 567899999986 44321 1111 22 568899
Q ss_pred EEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 129 AFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 129 afSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
+++++|+++++...++.|.+||.+++. .+..+. .+...+.+++|+++++.| +++...++.|..||+
T Consensus 232 ~~d~~G~l~v~~~~~~~i~~~d~~~g~-~~~~~~--~~~~~~~~i~~~~dg~~l-----------~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 232 DFDEDNNLLVANWGSSHIEVFGPDGGQ-PKMRIR--CPFEKPSNLHFKPQTKTI-----------FVTEHENNAVWKFEW 297 (314)
T ss_dssp EEBTTCCEEEEEETTTEEEEECTTCBS-CSEEEE--CSSSCEEEEEECTTSSEE-----------EEEETTTTEEEEEEC
T ss_pred EECCCCCEEEEEcCCCEEEEEcCCCCc-EeEEEe--CCCCCceeEEECCCCCEE-----------EEEeCCCCeEEEEeC
Confidence 999999988888888999999998543 334444 345789999998865533 333444567888876
Q ss_pred C
Q 006743 209 L 209 (633)
Q Consensus 209 r 209 (633)
.
T Consensus 298 ~ 298 (314)
T 1pjx_A 298 Q 298 (314)
T ss_dssp S
T ss_pred C
Confidence 4
No 202
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.97 E-value=1.1e-08 Score=116.92 Aligned_cols=195 Identities=11% Similarity=0.057 Sum_probs=125.8
Q ss_pred CccCCCCEEEEEECCCc-------------EEEEECCCCce--eEEEeCC-CCCcEEEEEEccCCCeEEEEEeCCC----
Q 006743 1 MYNCKDEHLASISLSGD-------------LILHNLASGAK--AAELKDP-NEQVLRVLDYSRNSRHLLVTAGDDG---- 60 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~-------------I~IWDl~tgk~--v~~~~~~-~~~~VssLafSpdg~~lLaSGs~DG---- 60 (633)
+|+|||+.|+.++.|.. |++|++.++.. ...+... +...+..+.|+|+|+. |+.++.++
T Consensus 174 ~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~-l~~~~~~~~~~~ 252 (695)
T 2bkl_A 174 KWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKY-LFVYILRGWSEN 252 (695)
T ss_dssp EECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCC-EEEEEEETTTEE
T ss_pred EEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCE-EEEEEeCCCCce
Confidence 48999999999988776 99999988762 2233321 3345677999999984 55444444
Q ss_pred eEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEe---CCCeEEEEeCCCCce---eeEeeC--CCCeEEEEEec
Q 006743 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVG---LDKKLYTYDPGSRRP---SSCITY--EAPFSSLAFID 132 (633)
Q Consensus 61 tI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS---~DGtVrIWDlrtgk~---v~~i~h--~~~ItsLafSP 132 (633)
.|++||..+.. ...+..+...+....| +++.+++... .++.|++||+.++.. ...+.+ ...+..++|+
T Consensus 253 ~l~~~~~~~~~--~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~- 328 (695)
T 2bkl_A 253 DVYWKRPGEKD--FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV- 328 (695)
T ss_dssp EEEEECTTCSS--CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-
T ss_pred EEEEEcCCCCc--eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-
Confidence 66777665544 3455566666777777 5565444443 257899999987753 344443 4457888888
Q ss_pred CCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 133 DDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 133 dG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
++.++++...|+..+||.+.-.......+. ..+.+.|..++++|++..++.. .-+....+.|++||+.
T Consensus 329 ~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~--------~ss~~~P~~v~~~d~~ 396 (695)
T 2bkl_A 329 GGHLSLEYLKDATSEVRVATLKGKPVRTVQ-LPGVGAASNLMGLEDLDDAYYV--------FTSFTTPRQIYKTSVS 396 (695)
T ss_dssp TTEEEEEEEETTEEEEEEEETTCCEEEECC-CSSSSEECCCBSCTTCSEEEEE--------EEETTEEEEEEEEETT
T ss_pred CCEEEEEEEECCEEEEEEEeCCCCeeEEec-CCCCeEEEEeecCCCCCEEEEE--------EcCCCCCCEEEEEECC
Confidence 677888889999888876542222223332 1225667778888876554432 1122235678888874
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.86 E-value=1.7e-07 Score=101.07 Aligned_cols=188 Identities=7% Similarity=0.009 Sum_probs=125.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC--eEEEEECCCCCceeEEe-
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSWL- 77 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DG--tI~IWDl~t~~~~v~~l- 77 (633)
+|+++|+++++...++.|++||..++........ ..... ++|+++++ .|+.+..++ .|++||..+... ...+
T Consensus 137 a~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~--~~~~~-ia~~~~g~-~l~~~d~~~~~~I~~~d~~~~~~-~~~~g 211 (409)
T 3hrp_A 137 AAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG--FKGGK-PAVTKDKQ-RVYSIGWEGTHTVYVYMKASGWA-PTRIG 211 (409)
T ss_dssp EECSTTEEEEEETTTTEEEEEETTTTEEEEEEET--CCBCB-CEECTTSS-EEEEEBSSTTCEEEEEEGGGTTC-EEEEE
T ss_pred EEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc--CCCCc-eeEecCCC-cEEEEecCCCceEEEEEcCCCce-eEEee
Confidence 4678888777666778999999987766555543 22333 89999998 677777655 899999876553 2222
Q ss_pred ---ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeE----e-eCCCCe-E-EEEEecC-CCEEEEEEcCCeE
Q 006743 78 ---KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC----I-TYEAPF-S-SLAFIDD-DWILTAGTSNGRV 146 (633)
Q Consensus 78 ---~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~----i-~h~~~I-t-sLafSPd-G~~LatGs~DGsV 146 (633)
......+.+++++|++..|+.+..++.|+.||..++..... . .....- . .++|+|+ +.++++-..++.|
T Consensus 212 ~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I 291 (409)
T 3hrp_A 212 QLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSV 291 (409)
T ss_dssp ECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEE
T ss_pred eccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEE
Confidence 22456788999999555566677889999999987764333 1 111222 3 9999995 5555566678899
Q ss_pred EEEECCCCCCceEEEeecC-------------CCCCeeEEEEccCCCeEEEeccCCCCeEEEEee-CCCeEEccCC
Q 006743 147 VFYDIRGKPQPLTVLRACS-------------SSEAVSSLCWQRAKPVFIDETTCKAETALLGGA-VGDSILMPDP 208 (633)
Q Consensus 147 ~IWDlrs~~k~v~~l~~~~-------------H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs-~Dg~IkIWDl 208 (633)
+.||.... +..+.... .-.....++|+++|++ +++.. .++.|+.||+
T Consensus 292 ~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~l------------yvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 292 YKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNF------------YIVDGFKGYCLRKLDI 352 (409)
T ss_dssp EEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCE------------EEEETTTTCEEEEEET
T ss_pred EEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCE------------EEEeCCCCCEEEEEEC
Confidence 99998754 22222111 0134788999886553 34444 5677888875
No 204
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.86 E-value=5.4e-07 Score=93.21 Aligned_cols=186 Identities=13% Similarity=0.038 Sum_probs=118.6
Q ss_pred CccCCCCE-EEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 1 MYNCKDEH-LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 1 AFSpdG~~-LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
+|+++++. +++...++.|.+||..+++.. .+. ....+.+++|.++++ ++++ ..+ .|++||..+++. ..+..
T Consensus 55 ~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~--~~~~v~~i~~~~dg~-l~v~-~~~-gl~~~d~~~g~~--~~~~~ 126 (326)
T 2ghs_A 55 TFDPASGTAWWFNILERELHELHLASGRKT-VHA--LPFMGSALAKISDSK-QLIA-SDD-GLFLRDTATGVL--TLHAE 126 (326)
T ss_dssp EEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE--CSSCEEEEEEEETTE-EEEE-ETT-EEEEEETTTCCE--EEEEC
T ss_pred eEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE--CCCcceEEEEeCCCe-EEEE-ECC-CEEEEECCCCcE--EEEee
Confidence 47887654 455556789999998776543 343 235688899999987 4444 444 499999987763 22222
Q ss_pred C-----CCCeEEEEEcCCCCEEEEEeC------CCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEE-cCCeEE
Q 006743 80 H-----SAPTAGISFSSDDKIIASVGL------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT-SNGRVV 147 (633)
Q Consensus 80 H-----~~~VtsLafSPdg~~LaSgS~------DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs-~DGsV~ 147 (633)
. ...+++++++|+|+++++... .+.|..+| +++.............++|+|+++.|+.+. .++.|+
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 1 235889999999987765542 25677777 555444434445678999999998776554 568999
Q ss_pred EEECC--CC-CC-ceEEEeec-CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 148 FYDIR--GK-PQ-PLTVLRAC-SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 148 IWDlr--s~-~k-~v~~l~~~-~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
+||+. ++ .. ....+... .....+.+++++++|.+.+ +...++.|.+||.
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwv------------a~~~~~~v~~~d~ 258 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWN------------ARWGEGAVDRYDT 258 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEE------------EEETTTEEEEECT
T ss_pred EEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEE------------EEeCCCEEEEECC
Confidence 99986 33 11 11222211 2345567788877654433 3334566777765
No 205
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.84 E-value=1.3e-07 Score=96.41 Aligned_cols=173 Identities=12% Similarity=0.060 Sum_probs=115.3
Q ss_pred CccCCCC-EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 1 MYNCKDE-HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 1 AFSpdG~-~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
+|+++|+ ++++...++.|..|+. +++. ..+.. ....+..+++.++|+ ++++...++.|.+||.. +. ...+..
T Consensus 51 ~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~-~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~-g~--~~~~~~ 123 (305)
T 3dr2_A 51 AWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLD-ATAFTNGNAVDAQQR-LVHCEHGRRAITRSDAD-GQ--AHLLVG 123 (305)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEE-SCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SC--EEEEEC
T ss_pred eEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeC-CCCccceeeECCCCC-EEEEECCCCEEEEECCC-CC--EEEEEe
Confidence 4789998 4556667889999997 5543 33432 345678899999997 55555556889999986 33 222221
Q ss_pred C-----CCCeEEEEEcCCCCEEEE----EeC-------------CCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEE
Q 006743 80 H-----SAPTAGISFSSDDKIIAS----VGL-------------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWIL 137 (633)
Q Consensus 80 H-----~~~VtsLafSPdg~~LaS----gS~-------------DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~L 137 (633)
+ ...++++++.++|+++++ |.. .+.|+.||..+++..... .......++|+||++.|
T Consensus 124 ~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~l 202 (305)
T 3dr2_A 124 RYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTL 202 (305)
T ss_dssp EETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEE
T ss_pred ccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEE
Confidence 1 235678999999998886 332 357888998777765544 44567889999999988
Q ss_pred EEEEcC------CeEEEEECCCCCC-ceEEEeecCCCCCeeEEEEccCCCeE
Q 006743 138 TAGTSN------GRVVFYDIRGKPQ-PLTVLRACSSSEAVSSLCWQRAKPVF 182 (633)
Q Consensus 138 atGs~D------GsV~IWDlrs~~k-~v~~l~~~~H~~~VtsLafsPdg~~L 182 (633)
+++... +.|++||+..... ....+.. ...+...+++++++|++.
T Consensus 203 yv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~-~~~~~pdgi~~d~~G~lw 253 (305)
T 3dr2_A 203 YVSQTPEQGHGSVEITAFAWRDGALHDRRHFAS-VPDGLPDGFCVDRGGWLW 253 (305)
T ss_dssp EEEECCC---CCCEEEEEEEETTEEEEEEEEEC-CSSSCCCSEEECTTSCEE
T ss_pred EEEecCCcCCCCCEEEEEEecCCCccCCeEEEE-CCCCCCCeEEECCCCCEE
Confidence 887765 7899999875420 0011111 123445667777766533
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.83 E-value=6.6e-07 Score=90.92 Aligned_cols=188 Identities=9% Similarity=0.060 Sum_probs=119.4
Q ss_pred CccCCCCEE-EEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 1 MYNCKDEHL-ASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 1 AFSpdG~~L-aSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
+|+++++.| ++...++.|+.||..+++. ..+. ....+.++++.++++ ++++ . ++.|.+||..+++. ..+..
T Consensus 19 ~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~--~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d~~~g~~--~~~~~ 90 (297)
T 3g4e_A 19 VWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT--MDAPVSSVALRQSGG-YVAT-I-GTKFCALNWKEQSA--VVLAT 90 (297)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE--CSSCEEEEEEBTTSS-EEEE-E-TTEEEEEETTTTEE--EEEEE
T ss_pred eEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe--CCCceEEEEECCCCC-EEEE-E-CCeEEEEECCCCcE--EEEEe
Confidence 378865544 4555678999999987765 3343 345688899999998 4444 3 57899999987653 22221
Q ss_pred -----CCCCeEEEEEcCCCCEEEEEeC-----------CCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEE-EEc
Q 006743 80 -----HSAPTAGISFSSDDKIIASVGL-----------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTA-GTS 142 (633)
Q Consensus 80 -----H~~~VtsLafSPdg~~LaSgS~-----------DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~Lat-Gs~ 142 (633)
....+++++++|+|+++++... .+.|+.+|.. ++.............++|+||++.|+. ...
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCC
Confidence 1235789999999997665432 2345555553 444444444456789999999987755 455
Q ss_pred CCeEEEEECC--CCCCc-eEEEeec-CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 143 NGRVVFYDIR--GKPQP-LTVLRAC-SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 143 DGsV~IWDlr--s~~k~-v~~l~~~-~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
++.|.+||+. ++... .+.+... .+.+.+..++++++|++. ++...++.|.+||..
T Consensus 170 ~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lw------------va~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 170 SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLW------------VACYNGGRVIRLDPV 228 (297)
T ss_dssp GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEE------------EEEETTTEEEEECTT
T ss_pred CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEE------------EEEcCCCEEEEEcCC
Confidence 7899999974 33210 1122211 234567888888865443 333446677777764
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.82 E-value=5.7e-07 Score=91.43 Aligned_cols=176 Identities=13% Similarity=0.085 Sum_probs=115.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCC---CCCcEEEEEEccCCCeEEEEEeC---------CCeEEEEECC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDP---NEQVLRVLDYSRNSRHLLVTAGD---------DGTLHLWDTT 68 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~---~~~~VssLafSpdg~~lLaSGs~---------DGtI~IWDl~ 68 (633)
+|+++|++++ +. ++.|.+||..+++........ ....+..+++.++|+ ++++... .....||.+.
T Consensus 60 ~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d 136 (297)
T 3g4e_A 60 ALRQSGGYVA-TI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLF 136 (297)
T ss_dssp EEBTTSSEEE-EE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEEC
T ss_pred EECCCCCEEE-EE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEE
Confidence 4678898554 44 568999999877654333221 224578899999998 5554322 1234555554
Q ss_pred CCCceeEEeccCCCCeEEEEEcCCCCEEE-EEeCCCeEEEEeC--CCCcee--eEe----eCCCCeEEEEEecCCCEEEE
Q 006743 69 GRSPKVSWLKQHSAPTAGISFSSDDKIIA-SVGLDKKLYTYDP--GSRRPS--SCI----TYEAPFSSLAFIDDDWILTA 139 (633)
Q Consensus 69 t~~~~v~~l~~H~~~VtsLafSPdg~~La-SgS~DGtVrIWDl--rtgk~v--~~i----~h~~~ItsLafSPdG~~Lat 139 (633)
.... ...+..+....+.++|+|+++.|+ +.+.++.|.+||+ .++... ..+ .....+..++++++|++.++
T Consensus 137 ~~g~-~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva 215 (297)
T 3g4e_A 137 PDHH-VKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVA 215 (297)
T ss_dssp TTSC-EEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEE
T ss_pred CCCC-EEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEE
Confidence 3222 223334445678999999998765 4556789999987 455432 112 13356889999999988888
Q ss_pred EEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEc-cCCCeEE
Q 006743 140 GTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQ-RAKPVFI 183 (633)
Q Consensus 140 Gs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafs-Pdg~~La 183 (633)
...++.|.+||..++ +.+..+. .+...+++++|. |+++.|.
T Consensus 216 ~~~~~~v~~~d~~tG-~~~~~i~--~p~~~~t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 216 CYNGGRVIRLDPVTG-KRLQTVK--LPVDKTTSCCFGGKNYSEMY 257 (297)
T ss_dssp EETTTEEEEECTTTC-CEEEEEE--CSSSBEEEEEEESGGGCEEE
T ss_pred EcCCCEEEEEcCCCc-eEEEEEE--CCCCCceEEEEeCCCCCEEE
Confidence 878889999999876 3444454 345679999998 7655443
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.78 E-value=5.9e-07 Score=96.71 Aligned_cols=191 Identities=10% Similarity=0.068 Sum_probs=123.8
Q ss_pred CccCCCCEEEEEECCC--cEEEEECCCCceeEEE---eCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE
Q 006743 1 MYNCKDEHLASISLSG--DLILHNLASGAKAAEL---KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG--~I~IWDl~tgk~v~~~---~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~ 75 (633)
+|+++++.|+++..++ .|.+|+...+.....+ .......+.+++++|++.. |+.+..++.|+.||..+......
T Consensus 177 a~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 177 AVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTTCCEEEE
T ss_pred eEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCCCCEEEE
Confidence 4788999999888766 7999998766543333 1113345667899995553 44477789999999987662211
Q ss_pred E---eccCCCCe-E-EEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeEeeCC---------------CCeEEEEEecCC
Q 006743 76 W---LKQHSAPT-A-GISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCITYE---------------APFSSLAFIDDD 134 (633)
Q Consensus 76 ~---l~~H~~~V-t-sLafSP-dg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~---------------~~ItsLafSPdG 134 (633)
. ..++...- . .++|+| ++.++++-..++.|+.||.... ......+. .....++++++|
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG 334 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG 334 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC
Confidence 0 12222222 3 999999 4666666667889999997643 33333322 348899999999
Q ss_pred CEEEEEE-cCCeEEEEECCCCCCceEEEeec-C------------CCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCC
Q 006743 135 WILTAGT-SNGRVVFYDIRGKPQPLTVLRAC-S------------SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVG 200 (633)
Q Consensus 135 ~~LatGs-~DGsV~IWDlrs~~k~v~~l~~~-~------------H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~D 200 (633)
+++++-. .++.|+.||+.++. +..+... . .-.....+++++++ .++++....
T Consensus 335 ~lyvad~~~~~~I~~~~~~~G~--v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g------------~lyVad~~n 400 (409)
T 3hrp_A 335 NFYIVDGFKGYCLRKLDILDGY--VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG------------GYWIAEAWG 400 (409)
T ss_dssp CEEEEETTTTCEEEEEETTTTE--EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS------------EEEEEESTT
T ss_pred CEEEEeCCCCCEEEEEECCCCE--EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC------------CEEEEECCC
Confidence 9777777 78999999976652 2222211 0 02457888888854 444444556
Q ss_pred CeEEccC
Q 006743 201 DSILMPD 207 (633)
Q Consensus 201 g~IkIWD 207 (633)
+.|+.++
T Consensus 401 ~~Ir~i~ 407 (409)
T 3hrp_A 401 KAIRKYA 407 (409)
T ss_dssp CEEEEEE
T ss_pred CeEEEEE
Confidence 6666553
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.77 E-value=4.6e-08 Score=105.56 Aligned_cols=124 Identities=12% Similarity=0.058 Sum_probs=97.6
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCe
Q 006743 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPT 84 (633)
Q Consensus 5 dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~V 84 (633)
|+++|+++ .++.|++||+.+......... +...+..+.+.+. .++++..||.|.+||+..... .. +...|
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~-~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~-~~----~~~~V 165 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELSEFRTVTS-FEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKST-KQ----LAQNV 165 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTTCEEEEEE-CSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCE-EE----EEESE
T ss_pred CCCEEEEE-cCCcEEEEEchhhhccCccce-eecceeeEEecCC---CEEEEECCCCEEEEEccCCcc-cc----ccCCc
Confidence 78899998 889999999987665444443 3445677777654 288889999999999987763 22 44689
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eeEe----------eCCCCeEEEEEecCCCEEEEE
Q 006743 85 AGISFSSDDKIIASVGLDKKLYTYDPGSRRP--SSCI----------TYEAPFSSLAFIDDDWILTAG 140 (633)
Q Consensus 85 tsLafSPdg~~LaSgS~DGtVrIWDlrtgk~--v~~i----------~h~~~ItsLafSPdG~~LatG 140 (633)
.|++|+|+| ++.|..||++++|+...+.. ...+ .|...|.+++|.+++.++++-
T Consensus 166 s~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 166 TSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred eEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 999999999 78899999999999987775 4445 257789999999999888763
No 210
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.75 E-value=4e-07 Score=104.80 Aligned_cols=196 Identities=13% Similarity=0.106 Sum_probs=124.5
Q ss_pred CccCCCCEEEEEECCCc--------------EEEEECCCCce--eEEEeCC-CCCcEEEEEEccCCCeEEEEEeCC----
Q 006743 1 MYNCKDEHLASISLSGD--------------LILHNLASGAK--AAELKDP-NEQVLRVLDYSRNSRHLLVTAGDD---- 59 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~--------------I~IWDl~tgk~--v~~~~~~-~~~~VssLafSpdg~~lLaSGs~D---- 59 (633)
+|+|| +.|+.+..++. |++|++.++.. ...+... +...+..+.|+|+|+ +|+..+.+
T Consensus 215 ~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~ 292 (741)
T 1yr2_A 215 AWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGR-WVVITSSEGTDP 292 (741)
T ss_dssp EESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECTTCS
T ss_pred EEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCC-EEEEEEEccCCC
Confidence 48999 99988877654 89999977652 2233322 222467789999998 45544433
Q ss_pred -CeEEEEECCCCCce-eEEeccCCCCeEEEEEcCCCCEEEEEeCC----CeEEEEeCCCC--ceeeEee-CCCCeEEEEE
Q 006743 60 -GTLHLWDTTGRSPK-VSWLKQHSAPTAGISFSSDDKIIASVGLD----KKLYTYDPGSR--RPSSCIT-YEAPFSSLAF 130 (633)
Q Consensus 60 -GtI~IWDl~t~~~~-v~~l~~H~~~VtsLafSPdg~~LaSgS~D----GtVrIWDlrtg--k~v~~i~-h~~~ItsLaf 130 (633)
..|++||+.++... ...+..+...+.... .|+++.|+..+.+ +.|++||+.++ +....+. +...+..++|
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~ 371 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGI 371 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEE
Confidence 38999999776211 334455555555554 4888888888764 45999999874 3344443 3344667788
Q ss_pred ecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 131 IDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 131 SPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
. ++.++++...|+..+||.+.........+. ..+.+.|..+.++|+++.++.. +-+....+.|++||+.
T Consensus 372 ~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~--------~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 372 A-GNRLFASYIHDAKSQVLAFDLDGKPAGAVS-LPGIGSASGLSGRPGDRHAYLS--------FSSFTQPATVLALDPA 440 (741)
T ss_dssp E-BTEEEEEEEETTEEEEEEEETTSCEEEECB-CSSSCEEEEEECCBTCSCEEEE--------EEETTEEEEEEEEETT
T ss_pred E-CCEEEEEEEECCEEEEEEEeCCCCceeecc-CCCCeEEEEeecCCCCCEEEEE--------EcCCCCCCEEEEEECC
Confidence 7 566778888899877775542112233333 1245678889999876655432 1112235678888874
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.74 E-value=1.6e-06 Score=89.65 Aligned_cols=170 Identities=12% Similarity=0.055 Sum_probs=111.5
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeC---CCCCcEEEEEEccCCCeEEEEEeC------CCeEEEEECCCCCc
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD---PNEQVLRVLDYSRNSRHLLVTAGD------DGTLHLWDTTGRSP 72 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~---~~~~~VssLafSpdg~~lLaSGs~------DGtI~IWDl~t~~~ 72 (633)
|+++|+++++. .+ .|.+||..+++....... .....+.+++++++|+ ++++... .+.|+.++ +++
T Consensus 97 ~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~- 170 (326)
T 2ghs_A 97 KISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGK- 170 (326)
T ss_dssp EEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTE-
T ss_pred EeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCc-
Confidence 67788766644 44 499999988775433221 1124578899999998 4544332 24566666 333
Q ss_pred eeEEeccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEeCC--CC-cee--eEe-e---CCCCeEEEEEecCCCEEEEEEc
Q 006743 73 KVSWLKQHSAPTAGISFSSDDKIIASV-GLDKKLYTYDPG--SR-RPS--SCI-T---YEAPFSSLAFIDDDWILTAGTS 142 (633)
Q Consensus 73 ~v~~l~~H~~~VtsLafSPdg~~LaSg-S~DGtVrIWDlr--tg-k~v--~~i-~---h~~~ItsLafSPdG~~LatGs~ 142 (633)
...+..+....+.++|+|+++.++.+ ..++.|.+||+. ++ ... ..+ . ....+..++++++|++.++...
T Consensus 171 -~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~ 249 (326)
T 2ghs_A 171 -VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG 249 (326)
T ss_dssp -EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET
T ss_pred -EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC
Confidence 33333344567899999999877555 457899999986 55 321 112 1 2355788999999988777777
Q ss_pred CCeEEEEECCCCCCceEEEeecCCCCCeeEEEEc-cCCCeE
Q 006743 143 NGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQ-RAKPVF 182 (633)
Q Consensus 143 DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafs-Pdg~~L 182 (633)
++.|.+||.. + +.+..+. .+...+++++|. +++..|
T Consensus 250 ~~~v~~~d~~-g-~~~~~i~--~~~~~~~~~af~g~d~~~L 286 (326)
T 2ghs_A 250 EGAVDRYDTD-G-NHIARYE--VPGKQTTCPAFIGPDASRL 286 (326)
T ss_dssp TTEEEEECTT-C-CEEEEEE--CSCSBEEEEEEESTTSCEE
T ss_pred CCEEEEECCC-C-CEEEEEE--CCCCCcEEEEEecCCCCEE
Confidence 7899999984 3 3344444 345679999998 765544
No 212
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.73 E-value=2.5e-06 Score=90.82 Aligned_cols=191 Identities=10% Similarity=-0.014 Sum_probs=126.1
Q ss_pred CccCCCCEEEEEEC--CCcEEEEECCCCceeEE-EeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006743 1 MYNCKDEHLASISL--SGDLILHNLASGAKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (633)
Q Consensus 1 AFSpdG~~LaSgs~--DG~I~IWDl~tgk~v~~-~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l 77 (633)
+|+|||++|+++.. ++.|.++| .+++.+.. +.. .. |+.+.+++...+++.+.||.+.++|. +++.. ...
T Consensus 131 ~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~--~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~-~~~ 202 (373)
T 2mad_H 131 ANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS--PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAA-GAG 202 (373)
T ss_pred EECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC--Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEE-EEE
Confidence 47999999998874 47899999 99998877 653 22 24556777667888889999999999 66532 111
Q ss_pred c-----cCCCCe-EEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eeEee-----------CCCCeEEEEEecCCCEEE
Q 006743 78 K-----QHSAPT-AGISFSSDDKIIASVGLDKKLYTYDPGSRRP--SSCIT-----------YEAPFSSLAFIDDDWILT 138 (633)
Q Consensus 78 ~-----~H~~~V-tsLafSPdg~~LaSgS~DGtVrIWDlrtgk~--v~~i~-----------h~~~ItsLafSPdG~~La 138 (633)
. ....++ ....+.+++..++..+.++.|.+.|+..+.. +..+. .......++++|+++.++
T Consensus 203 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ly 282 (373)
T 2mad_H 203 LVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIY 282 (373)
T ss_pred eccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEE
Confidence 1 111221 2345667665555555788999999976532 22221 123344578999998888
Q ss_pred EEEc----------CCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCC-eEEEeccCCCCeEEEEeeCCCeEEccC
Q 006743 139 AGTS----------NGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKP-VFIDETTCKAETALLGGAVGDSILMPD 207 (633)
Q Consensus 139 tGs~----------DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~-~Las~s~~sd~~lLlSgs~Dg~IkIWD 207 (633)
+... ++.|.++|..+. +.+..+. -.....+++|+|+|+ .++++ ...++.|.+||
T Consensus 283 V~~~~~~~~~~~~~~~~V~VID~~t~-~vv~~i~---~g~~p~~i~~s~Dg~~~l~v~-----------~~~~~~V~ViD 347 (373)
T 2mad_H 283 LLTSEQSAWKLHAAAKEVTSVTGLVG-QTSSQIS---LGHDVDAISVAQDGGPDLYAL-----------SAGTEVLHIYD 347 (373)
T ss_pred EEeccCCcccccCCCCeEEEEECCCC-EEEEEEE---CCCCcCeEEECCCCCeEEEEE-----------cCCCCeEEEEE
Confidence 7653 357999999887 3344443 334689999999766 33332 22478888888
Q ss_pred CCCCCCC
Q 006743 208 PLPSVTT 214 (633)
Q Consensus 208 lr~~~~~ 214 (633)
+......
T Consensus 348 ~~t~~vv 354 (373)
T 2mad_H 348 AGAGDQD 354 (373)
T ss_pred CCCCCEE
Confidence 8655443
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.71 E-value=6.9e-07 Score=92.95 Aligned_cols=180 Identities=8% Similarity=0.058 Sum_probs=118.8
Q ss_pred ccCCCCEEEEEEC-----CCcEEEEECCCCceeEEEeCC-----CCCcEEEEEEccCCCeEEEEEe---CCCeEEEEECC
Q 006743 2 YNCKDEHLASISL-----SGDLILHNLASGAKAAELKDP-----NEQVLRVLDYSRNSRHLLVTAG---DDGTLHLWDTT 68 (633)
Q Consensus 2 FSpdG~~LaSgs~-----DG~I~IWDl~tgk~v~~~~~~-----~~~~VssLafSpdg~~lLaSGs---~DGtI~IWDl~ 68 (633)
|+++|+++++-.. ++.|.+||+.+++.+..+..+ +...+..+++.+++..++++-. .++.|.+||+.
T Consensus 74 ~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~ 153 (343)
T 2qe8_A 74 SDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ 153 (343)
T ss_dssp ECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT
T ss_pred EcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC
Confidence 5677765554433 578999999999877766532 1234577899987654566655 68899999998
Q ss_pred CCCceeEEeccC-----------------------------CCCeEEEEEcCCCCEEEEEeCCC-eEEEEeCC---CCc-
Q 006743 69 GRSPKVSWLKQH-----------------------------SAPTAGISFSSDDKIIASVGLDK-KLYTYDPG---SRR- 114 (633)
Q Consensus 69 t~~~~v~~l~~H-----------------------------~~~VtsLafSPdg~~LaSgS~DG-tVrIWDlr---tgk- 114 (633)
+++. .+.+..| ...+..|+|+|+++.|+.+..++ .|+.+|.. .+.
T Consensus 154 ~g~~-~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~ 232 (343)
T 2qe8_A 154 TGLA-ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQL 232 (343)
T ss_dssp TCCE-EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTC
T ss_pred CCCE-EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCC
Confidence 6652 3333221 12368899999999888887766 56666532 111
Q ss_pred -------eeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEE
Q 006743 115 -------PSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFID 184 (633)
Q Consensus 115 -------~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las 184 (633)
.+....+......++++++|.++++...++.|.+||..++. +..+....+...+.+++|.+++..+++
T Consensus 233 ~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~--~~~~~~~~~~~~p~~va~~~~g~l~v~ 307 (343)
T 2qe8_A 233 TDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA--YKLLVTDEKLSWTDSFNFGSDGYLYFD 307 (343)
T ss_dssp CHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE--EEEEEECGGGSCEEEEEECTTSCEEEE
T ss_pred ChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC--EEEEEECCceecCCeeEECCCCcEEEE
Confidence 01222344567789999999999998889999999984442 222222123456889999886544443
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.70 E-value=4.5e-07 Score=103.81 Aligned_cols=176 Identities=13% Similarity=0.047 Sum_probs=111.9
Q ss_pred CccCCCCEEEEEE-----CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC-------------eE
Q 006743 1 MYNCKDEHLASIS-----LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG-------------TL 62 (633)
Q Consensus 1 AFSpdG~~LaSgs-----~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DG-------------tI 62 (633)
+|||||++||.+. ....|++||+.+++.+..... ......++|+ |++. |+.+..+. .|
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~--~~k~~~~~Ws-Dg~~-l~y~~~~~~~~~~~~~~~~~~~v 210 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK--DVKFSGISWL-GNEG-FFYSSYDKPDGSELSARTDQHKV 210 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE--EEESCCCEEE-TTTE-EEEEESSCCC-------CCCCEE
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccC--CceeccEEEe-CCCE-EEEEEecCcccccccccCCCcEE
Confidence 4899999988543 224799999999986543211 1112457899 9984 55555553 49
Q ss_pred EEEECCCCCce---eEEecc-CCCCeEEEEEcCCCCEEEEEeC----CCeEEEEeCCCC--ceeeEeeCCCCeEEEEEec
Q 006743 63 HLWDTTGRSPK---VSWLKQ-HSAPTAGISFSSDDKIIASVGL----DKKLYTYDPGSR--RPSSCITYEAPFSSLAFID 132 (633)
Q Consensus 63 ~IWDl~t~~~~---v~~l~~-H~~~VtsLafSPdg~~LaSgS~----DGtVrIWDlrtg--k~v~~i~h~~~ItsLafSP 132 (633)
++|++.+.... +..... |...+..+.|+||+++|+.... +..|+++|+.++ +......+....... |++
T Consensus 211 ~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~ 289 (693)
T 3iuj_A 211 YFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDN 289 (693)
T ss_dssp EEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEE
T ss_pred EEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Eec
Confidence 99999765532 222223 4456788999999998865442 358999999876 344444555555554 667
Q ss_pred CCCEEEEEEc-C---CeEEEEECCCCCC-ceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006743 133 DDWILTAGTS-N---GRVVFYDIRGKPQ-PLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 133 dG~~LatGs~-D---GsV~IWDlrs~~k-~v~~l~~~~H~~~VtsLafsPdg~~Las~ 185 (633)
+|..|+..+. + +.|..||+.+... ....+. .|...+. .|++++++|+..
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~--~~s~~g~~lv~~ 343 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI--PERQQVL--TVHSGSGYLFAE 343 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--CCCSSCE--EEEEETTEEEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe--cCCCCEE--EEEEECCEEEEE
Confidence 7666655443 3 6799999987632 123333 3444454 788876665544
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.68 E-value=4.5e-09 Score=111.46 Aligned_cols=143 Identities=14% Similarity=0.121 Sum_probs=78.9
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCC-C
Q 006743 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSA-P 83 (633)
Q Consensus 5 dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~-~ 83 (633)
++..|++++.||.|+.||..+|+.+..+.. .. +.+..+..++. ++++++.||.|+.||..+++... .+..+.. .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~-~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w-~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DP-VLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLT-KLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CC-SCCCC-----C-CEEECTTTCCEEEC-----CCSE-ECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CC-ceecceEcCCC-EEEEeCCCCEEEEEECCCCceee-eeeccCccc
Confidence 578999999999999999999999988875 22 22334445665 67777899999999998776432 2222211 1
Q ss_pred eE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC
Q 006743 84 TA-GISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (633)
Q Consensus 84 Vt-sLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k 156 (633)
+. ...+. ++..+++++.|+.|+.||.++|+.+..+.... ...++|++..|++++.|+.|+.||.++++.
T Consensus 83 ~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 83 VQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSC
T ss_pred cccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCE
Confidence 10 00111 35577888899999999999999876664333 234567888999999999999999998754
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.60 E-value=3.8e-06 Score=90.53 Aligned_cols=147 Identities=6% Similarity=-0.044 Sum_probs=110.8
Q ss_pred ccCCCCEEEEEEC-----CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEe---------CCCeEEEEEC
Q 006743 2 YNCKDEHLASISL-----SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWDT 67 (633)
Q Consensus 2 FSpdG~~LaSgs~-----DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs---------~DGtI~IWDl 67 (633)
..|+++.+++... ++.|.++|..+++.+..+..... . . ++++|+++.++++.. .++.|.+||.
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~-P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL-P-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS-C-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC-C-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 4688998888865 67999999999999998875333 2 4 899999995555442 4688999999
Q ss_pred CCCCceeEEeccC-------CCCeEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEE
Q 006743 68 TGRSPKVSWLKQH-------SAPTAGISFSSDDKIIASVGL--DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (633)
Q Consensus 68 ~t~~~~v~~l~~H-------~~~VtsLafSPdg~~LaSgS~--DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~La 138 (633)
.+.+. +..+.-. ......++|+|||++++++.. ++.|.++|+.+++.+..+...+. ...+....+.++
T Consensus 117 ~t~~v-~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~ 193 (386)
T 3sjl_D 117 VTLLP-TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFF 193 (386)
T ss_dssp TTCCE-EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEE
T ss_pred CCCeE-EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeE
Confidence 98874 3333211 124667999999999998874 68999999999999988865432 223333456777
Q ss_pred EEEcCCeEEEEECCCC
Q 006743 139 AGTSNGRVVFYDIRGK 154 (633)
Q Consensus 139 tGs~DGsV~IWDlrs~ 154 (633)
+.+.||.+.+.++...
T Consensus 194 ~~~~DG~~~~v~~~~~ 209 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTE 209 (386)
T ss_dssp EEETTSCEEEEECCSS
T ss_pred EECCCCCEEEEECCCC
Confidence 8889999999999763
No 217
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.60 E-value=4.9e-06 Score=85.26 Aligned_cols=193 Identities=12% Similarity=0.129 Sum_probs=128.0
Q ss_pred CccCCCCEEEEEEC--CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 006743 1 MYNCKDEHLASISL--SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (633)
Q Consensus 1 AFSpdG~~LaSgs~--DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~ 78 (633)
+|+++|..+++.+. ++.|.++|+.+++.+..+.-........+++. ++.++++.-.++.|.++|..+.+. +..+.
T Consensus 27 ~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v-~~~i~ 103 (266)
T 2iwa_A 27 VYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN-IKNFT 103 (266)
T ss_dssp EECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE-EEEEE
T ss_pred EEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE-EEEEE
Confidence 36777644444433 57999999999999988764222222334554 455666666789999999998774 34443
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCC------CCeEEEEEecCCCEEEEEEcCCeEEEEECC
Q 006743 79 QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYE------APFSSLAFIDDDWILTAGTSNGRVVFYDIR 152 (633)
Q Consensus 79 ~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~------~~ItsLafSPdG~~LatGs~DGsV~IWDlr 152 (633)
..... ...+++|++.++++..++.|.++|..+.+.+..+... ..+..+.|. +|...+....++.|.+.|..
T Consensus 104 ~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~ 180 (266)
T 2iwa_A 104 HQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAK 180 (266)
T ss_dssp CCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETT
T ss_pred CCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECC
Confidence 22121 2335557777777778899999999998888777422 246788888 67544444457899999999
Q ss_pred CCCCceEEEeecC-----------CCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 153 GKPQPLTVLRACS-----------SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 153 s~~k~v~~l~~~~-----------H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
++ +.+..+...+ .......|+|+|++ ..+++++.....|.+.|+.+.
T Consensus 181 tg-~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~-----------~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 181 DG-TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN-----------KRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TC-CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT-----------TEEEEEETTCSEEEEEEEEEC
T ss_pred CC-cEEEEEECCCcccccccccccccCceEEEEEcCCC-----------CEEEEECCCCCeEEEEEEecc
Confidence 88 4555555321 11356899999964 345566666777777776543
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.55 E-value=4.9e-06 Score=95.18 Aligned_cols=194 Identities=14% Similarity=0.149 Sum_probs=122.1
Q ss_pred CccCCCCEEEEEECCC-------------cEEEEECCCCce--eEEEeCCC--CCcEEEEEEccCCCeEEEEEeCC---C
Q 006743 1 MYNCKDEHLASISLSG-------------DLILHNLASGAK--AAELKDPN--EQVLRVLDYSRNSRHLLVTAGDD---G 60 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG-------------~I~IWDl~tgk~--v~~~~~~~--~~~VssLafSpdg~~lLaSGs~D---G 60 (633)
+|+ ||+.|+.+..+. .|++|++.++.. ...+.... ...+..+.|+|+++.++++...+ .
T Consensus 181 ~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 259 (693)
T 3iuj_A 181 SWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGN 259 (693)
T ss_dssp EEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCC
T ss_pred EEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCc
Confidence 488 999999888774 399999987653 33333221 23355689999999665655533 5
Q ss_pred eEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEe-CC---CeEEEEeCCCCce---eeEeeCCCCeEEEEEecC
Q 006743 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVG-LD---KKLYTYDPGSRRP---SSCITYEAPFSSLAFIDD 133 (633)
Q Consensus 61 tI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS-~D---GtVrIWDlrtgk~---v~~i~h~~~ItsLafSPd 133 (633)
.|++||+.+.......+..+...+... |++++..|+..+ .+ +.|..+|+.++.. ...+.+...+. .|+++
T Consensus 260 ~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~ 336 (693)
T 3iuj_A 260 RLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSG 336 (693)
T ss_dssp EEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEE
T ss_pred EEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEE
Confidence 899999977643345566666666665 666666555444 33 5899999988754 33445555554 88999
Q ss_pred CCEEEEEEc-CC--eEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 134 DWILTAGTS-NG--RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 134 G~~LatGs~-DG--sV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
+++|+.... ++ .|++||+... ....+. ....+.+..+.+++++..++.... +...-..+..||+.
T Consensus 337 g~~lv~~~~~~g~~~l~~~d~~g~--~~~~l~-~p~~~~~~~~~~~~d~~~l~~~~s--------s~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 337 SGYLFAEYMVDATARVEQFDYEGK--RVREVA-LPGLGSVSGFNGKHDDPALYFGFE--------NYAQPPTLYRFEPK 404 (693)
T ss_dssp TTEEEEEEEETTEEEEEEECTTSC--EEEEEC-CSSSSEEEECCCCTTCSCEEEEEE--------CSSSCCEEEEECTT
T ss_pred CCEEEEEEEECCeeEEEEEECCCC--eeEEee-cCCCceEEeeecCCCCCEEEEEec--------CCCCCCEEEEEECC
Confidence 988876655 44 6899998754 223333 224455667777766544432210 00123677777764
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.53 E-value=8.9e-07 Score=92.11 Aligned_cols=193 Identities=7% Similarity=0.026 Sum_probs=117.3
Q ss_pred CccCCCCEEEEEE--CCCcEEEEECCCCceeEEEeC------CCCCcEEEEEEccCCCeEEEEEeC-----CCeEEEEEC
Q 006743 1 MYNCKDEHLASIS--LSGDLILHNLASGAKAAELKD------PNEQVLRVLDYSRNSRHLLVTAGD-----DGTLHLWDT 67 (633)
Q Consensus 1 AFSpdG~~LaSgs--~DG~I~IWDl~tgk~v~~~~~------~~~~~VssLafSpdg~~lLaSGs~-----DGtI~IWDl 67 (633)
+++++|+.+++.. .++.++||.+.+++ +..+.. .+...+..|++.++++ ++++-.. ++.|.+||+
T Consensus 23 a~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~~i~~~d~ 100 (343)
T 2qe8_A 23 TLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVPKLVAWDT 100 (343)
T ss_dssp EECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCCEEEEEET
T ss_pred EECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCCeEEEEEC
Confidence 4678999888764 23435555554554 332321 1335678899999986 4444332 579999999
Q ss_pred CCCCceeEEecc------CCCCeEEEEEcCCCCEE-EEEe---CCCeEEEEeCCCCceeeEeeC----------------
Q 006743 68 TGRSPKVSWLKQ------HSAPTAGISFSSDDKII-ASVG---LDKKLYTYDPGSRRPSSCITY---------------- 121 (633)
Q Consensus 68 ~t~~~~v~~l~~------H~~~VtsLafSPdg~~L-aSgS---~DGtVrIWDlrtgk~v~~i~h---------------- 121 (633)
.+++. +..+.. +...+..+++++++..+ ++-. .++.|.+||+.+++....+..
T Consensus 101 ~tg~~-~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~ 179 (343)
T 2qe8_A 101 LNNQL-SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGV 179 (343)
T ss_dssp TTTEE-EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTE
T ss_pred CCCeE-EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCE
Confidence 87763 232221 23457899999855444 5544 578999999988776554311
Q ss_pred --------------CCCeEEEEEecCCCEEEEEEcCC-eEEEEECCC---CC----CceEEEeecCCCCCeeEEEEccCC
Q 006743 122 --------------EAPFSSLAFIDDDWILTAGTSNG-RVVFYDIRG---KP----QPLTVLRACSSSEAVSSLCWQRAK 179 (633)
Q Consensus 122 --------------~~~ItsLafSPdG~~LatGs~DG-sV~IWDlrs---~~----k~v~~l~~~~H~~~VtsLafsPdg 179 (633)
...+..|+|+|+|+.|+.+..++ .|+.++... .. +....+...++.+....++++++|
T Consensus 180 ~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G 259 (343)
T 2qe8_A 180 PVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDH 259 (343)
T ss_dssp ECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTC
T ss_pred EEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCC
Confidence 12368899999999998887766 566665421 10 000000111233455677887754
Q ss_pred CeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 180 PVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 180 ~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
.++++...++.|.+||.
T Consensus 260 ------------~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 260 ------------NIYVGDLAHSAIGVITS 276 (343)
T ss_dssp ------------CEEEEEGGGTEEEEEET
T ss_pred ------------CEEEEccCCCeEEEEEC
Confidence 44445556778888886
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.53 E-value=1.3e-06 Score=88.90 Aligned_cols=172 Identities=10% Similarity=0.122 Sum_probs=109.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEe---CCCCCcEEEEEEccCCCeEEEE----EeC-------------CC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELK---DPNEQVLRVLDYSRNSRHLLVT----AGD-------------DG 60 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~---~~~~~~VssLafSpdg~~lLaS----Gs~-------------DG 60 (633)
+|+++|+++++...++.|.+|+.. ++...... +.....+..+++.++|+ ++++ |.. .+
T Consensus 92 ~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~ 169 (305)
T 3dr2_A 92 AVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHH 169 (305)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCE
T ss_pred eECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCC
Confidence 367888866555456789999975 55322211 11122356789999998 6665 332 25
Q ss_pred eEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCcee--eEe--eCCCCeEEEEE
Q 006743 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD------KKLYTYDPGSRRPS--SCI--TYEAPFSSLAF 130 (633)
Q Consensus 61 tI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~D------GtVrIWDlrtgk~v--~~i--~h~~~ItsLaf 130 (633)
.|+.||..+++.. .+. .....+.++|+|+++.|+.+... +.|++||+..+... ..+ ...+.+..+++
T Consensus 170 ~v~~~d~~~g~~~--~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~ 246 (305)
T 3dr2_A 170 SVYRLPPDGSPLQ--RMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCV 246 (305)
T ss_dssp EEEEECSSSCCCE--EEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEE
T ss_pred eEEEEcCCCCcEE--EEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEE
Confidence 6777877666532 222 44567899999999988877665 78999998765421 111 12345667899
Q ss_pred ecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEE
Q 006743 131 IDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFID 184 (633)
Q Consensus 131 SPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las 184 (633)
+++|++ .+++.+| |++||.... .+..+.. + ..+.+++|.++++.|..
T Consensus 247 d~~G~l-wv~~~~g-v~~~~~~g~--~~~~~~~--~-~~~~~~~f~~d~~~L~i 293 (305)
T 3dr2_A 247 DRGGWL-WSSSGTG-VCVFDSDGQ--LLGHIPT--P-GTASNCTFDQAQQRLFI 293 (305)
T ss_dssp CTTSCE-EECCSSE-EEEECTTSC--EEEEEEC--S-SCCCEEEECTTSCEEEE
T ss_pred CCCCCE-EEecCCc-EEEECCCCC--EEEEEEC--C-CceeEEEEeCCCCEEEE
Confidence 999994 4444544 999998543 3444442 2 35889999886555443
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.53 E-value=1.6e-05 Score=84.54 Aligned_cols=146 Identities=11% Similarity=0.008 Sum_probs=99.1
Q ss_pred CccCCCCEEEEEE----------CCCcEEEEECCCCceeEEEeCC-C-----CCcEEEEEEccCCCeEEEEEe-C-CCeE
Q 006743 1 MYNCKDEHLASIS----------LSGDLILHNLASGAKAAELKDP-N-----EQVLRVLDYSRNSRHLLVTAG-D-DGTL 62 (633)
Q Consensus 1 AFSpdG~~LaSgs----------~DG~I~IWDl~tgk~v~~~~~~-~-----~~~VssLafSpdg~~lLaSGs-~-DGtI 62 (633)
+|+|||++|+++. .++.|.+||..+.+.+..+... . ......+.|+|+|+ +|+.+. . ++.|
T Consensus 72 ~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~-~l~v~n~~~~~~v 150 (373)
T 2mad_H 72 VAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNA-DLLFFQFAAGPAV 150 (373)
T ss_pred EECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCC-EEEEEecCCCCeE
Confidence 4899999999886 3678999999998888777532 0 12234689999999 555555 3 5889
Q ss_pred EEEECCCCCceeEE-eccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeEee------CCCC-eEEEEEecC
Q 006743 63 HLWDTTGRSPKVSW-LKQHSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCIT------YEAP-FSSLAFIDD 133 (633)
Q Consensus 63 ~IWDl~t~~~~v~~-l~~H~~~VtsLafSPd-g~~LaSgS~DGtVrIWDlrtgk~v~~i~------h~~~-ItsLafSPd 133 (633)
.++| .+.+. +.. +. ... |+.+.|+ .+.+++.+.||.+.++|. +++.+.... ...+ .....+.++
T Consensus 151 ~viD-~t~~~-~~~~i~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 151 GLVV-QGGSS-DDQLLS-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred EEEE-CCCCE-EeEEcC-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 9999 88773 333 32 222 2445564 456677888999999999 877663321 1112 223456676
Q ss_pred CCEEEEEEcCCeEEEEECCCC
Q 006743 134 DWILTAGTSNGRVVFYDIRGK 154 (633)
Q Consensus 134 G~~LatGs~DGsV~IWDlrs~ 154 (633)
+..++..+..+.|++.|+...
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred CCEEEEEcCCceEEEEeccCC
Confidence 665555557889999999764
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.46 E-value=1e-05 Score=88.66 Aligned_cols=192 Identities=8% Similarity=0.031 Sum_probs=126.6
Q ss_pred CCCCEEEEE-ECCCcEEEEECCCC----ceeEEEe------CCCCCcEEEEEEccCCCeEEEEEeCC------CeEEEEE
Q 006743 4 CKDEHLASI-SLSGDLILHNLASG----AKAAELK------DPNEQVLRVLDYSRNSRHLLVTAGDD------GTLHLWD 66 (633)
Q Consensus 4 pdG~~LaSg-s~DG~I~IWDl~tg----k~v~~~~------~~~~~~VssLafSpdg~~lLaSGs~D------GtI~IWD 66 (633)
.++++|++. ..++.|+|+|+.+. +.++.+. ......-..+.+.|++ +++++..+ |.|.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEE
Confidence 778877764 56789999998755 4555552 0011133456788998 56665555 7899999
Q ss_pred CCCCCceeEEeccC--C-CCeEEEEEcCCCCEEEEEe-------------------CCCeEEEEeCCCCceeeEeeCC--
Q 006743 67 TTGRSPKVSWLKQH--S-APTAGISFSSDDKIIASVG-------------------LDKKLYTYDPGSRRPSSCITYE-- 122 (633)
Q Consensus 67 l~t~~~~v~~l~~H--~-~~VtsLafSPdg~~LaSgS-------------------~DGtVrIWDlrtgk~v~~i~h~-- 122 (633)
..+.+. +..+... . ..-+.+-|+|+++.+++.. .+..|.+||+.+++.+..+...
T Consensus 171 ~~T~~v-~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 171 HYSFEP-LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp TTTCCE-EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred CCCCeE-EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 998884 4444422 1 2345688999999888875 3679999999998888777653
Q ss_pred -CCeEEEEE--ecCCCEEEEEEc------CCeEEEEECCCCC-CceEEEeecCC----------------CCCeeEEEEc
Q 006743 123 -APFSSLAF--IDDDWILTAGTS------NGRVVFYDIRGKP-QPLTVLRACSS----------------SEAVSSLCWQ 176 (633)
Q Consensus 123 -~~ItsLaf--SPdG~~LatGs~------DGsV~IWDlrs~~-k~v~~l~~~~H----------------~~~VtsLafs 176 (633)
.....+.| +|+++++++++. ++.|.+|....+. ....++..... ......|.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 34555656 999999888875 5678776655421 01111110000 2346788888
Q ss_pred cCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 177 RAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 177 Pdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
+||++|. ++.-.++.|.+||+.
T Consensus 330 ~DGrfLY-----------VSnrg~d~VavfdV~ 351 (462)
T 2ece_A 330 LDDKFLY-----------LSLWGIGEVRQYDIS 351 (462)
T ss_dssp TTSCEEE-----------EEETTTTEEEEEECS
T ss_pred CCCCEEE-----------EEeCCCCEEEEEEec
Confidence 8766654 444557889999885
No 223
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.45 E-value=8.3e-06 Score=83.33 Aligned_cols=171 Identities=14% Similarity=0.206 Sum_probs=113.7
Q ss_pred ccCCCCEEEEEECCC--cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 2 YNCKDEHLASISLSG--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 2 FSpdG~~LaSgs~DG--~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
|+ ++.++.+.+.+| .|+++|+++++.+..+.......--.++. +++.+++..-.++.+.+||..+.+. +..+..
T Consensus 50 ~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~-~~ti~~ 125 (262)
T 3nol_A 50 YR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQ-VRSFNY 125 (262)
T ss_dssp EE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCE-EEEEEC
T ss_pred EE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcE-EEEEEC
Confidence 45 555556666666 89999999999998887532221122333 4555666666799999999998884 344432
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeC---C---CCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 006743 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---E---APFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (633)
Q Consensus 80 H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h---~---~~ItsLafSPdG~~LatGs~DGsV~IWDlrs 153 (633)
.. .=..++ ++++.|+....++.|.++|..+.+.+..+.. . ..++.+.|. +|+..+..-.++.|.+.|.++
T Consensus 126 ~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 126 DG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp SS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTT
T ss_pred CC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCC
Confidence 22 113344 5677777777788999999999988877642 1 335567776 675444444688999999998
Q ss_pred CCCceEEEeecCC----------CCCeeEEEEccCCCe
Q 006743 154 KPQPLTVLRACSS----------SEAVSSLCWQRAKPV 181 (633)
Q Consensus 154 ~~k~v~~l~~~~H----------~~~VtsLafsPdg~~ 181 (633)
+ +.+..+...+- ......|+|+|+++.
T Consensus 202 G-~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~ 238 (262)
T 3nol_A 202 G-KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHR 238 (262)
T ss_dssp C-BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTE
T ss_pred C-cEEEEEECCcCccccccccCcCCceEEEEEcCCCCE
Confidence 8 45555554211 235689999996443
No 224
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.41 E-value=1.3e-05 Score=86.43 Aligned_cols=194 Identities=11% Similarity=0.052 Sum_probs=126.6
Q ss_pred CccCCCCEEEEEEC--CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC-CCceeEEe
Q 006743 1 MYNCKDEHLASISL--SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG-RSPKVSWL 77 (633)
Q Consensus 1 AFSpdG~~LaSgs~--DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t-~~~~v~~l 77 (633)
+|+|||++|+++.. ++.|.++|+.+++.+..+... .. ..+.|.+.+.+++.+.||.+.+.++.. ++. ....
T Consensus 143 a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~--g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v-~~~~ 216 (386)
T 3sjl_D 143 SLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP--DC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP-EITH 216 (386)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--SE---EEEEEEETTEEEEEETTSCEEEEECCSSSCC-EEEE
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC--Cc---ceeecCCCceeEEECCCCCEEEEECCCCCeE-EEee
Confidence 47899999998864 689999999999999988642 21 123355544777888999999999976 442 2211
Q ss_pred ccC----CCCeE-EEEEc-CCCCEEEEEeCCCeEEEEeCCCCce--eeEee-----------CCCCeEEEEEecCCCEEE
Q 006743 78 KQH----SAPTA-GISFS-SDDKIIASVGLDKKLYTYDPGSRRP--SSCIT-----------YEAPFSSLAFIDDDWILT 138 (633)
Q Consensus 78 ~~H----~~~Vt-sLafS-Pdg~~LaSgS~DGtVrIWDlrtgk~--v~~i~-----------h~~~ItsLafSPdG~~La 138 (633)
..+ ...+. ...|. ++|++++ .+.+|.|++.|+.++.. ...+. ....+..++++++++.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~ly 295 (386)
T 3sjl_D 217 TEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIY 295 (386)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEE
T ss_pred cceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEE
Confidence 111 12221 24664 4775444 66689999999976643 22121 123445678899998888
Q ss_pred EEEc----------CCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCC-eEEEeccCCCCeEEEEeeCCCeEEccC
Q 006743 139 AGTS----------NGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKP-VFIDETTCKAETALLGGAVGDSILMPD 207 (633)
Q Consensus 139 tGs~----------DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~-~Las~s~~sd~~lLlSgs~Dg~IkIWD 207 (633)
+... .+.|.++|+.+.+ .++.+.. ...+.+|+++++++ .| +++...++.|.++|
T Consensus 296 V~~~~~~~~~hk~~~~~V~viD~~t~k-v~~~i~v---g~~~~~lavs~D~~~~l-----------y~tn~~~~~VsViD 360 (386)
T 3sjl_D 296 LLVDQRDEWRHKTASRFVVVLDAKTGE-RLAKFEM---GHEIDSINVSQDEKPLL-----------YALSTGDKTLYIHD 360 (386)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCC-EEEEEEE---EEEECEEEECSSSSCEE-----------EEEETTTTEEEEEE
T ss_pred EEeccccccccCCCCCEEEEEECCCCe-EEEEEEC---CCCcceEEECCCCCeEE-----------EEEcCCCCeEEEEE
Confidence 7653 2579999999984 4444442 24688999999754 22 23334578888888
Q ss_pred CCCCCCCCc
Q 006743 208 PLPSVTTSS 216 (633)
Q Consensus 208 lr~~~~~ss 216 (633)
........+
T Consensus 361 ~~t~k~~~~ 369 (386)
T 3sjl_D 361 AESGEELRS 369 (386)
T ss_dssp TTTCCEEEE
T ss_pred CCCCcEEEE
Confidence 866554443
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.41 E-value=7.1e-06 Score=94.41 Aligned_cols=178 Identities=15% Similarity=0.165 Sum_probs=117.8
Q ss_pred ccCCCCEEEEEECCCc-------------------EEEEECCCCceeEEEeCCCC--------CcEEEEEEccCCC--eE
Q 006743 2 YNCKDEHLASISLSGD-------------------LILHNLASGAKAAELKDPNE--------QVLRVLDYSRNSR--HL 52 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~-------------------I~IWDl~tgk~v~~~~~~~~--------~~VssLafSpdg~--~l 52 (633)
|++++++|+.+..++. |..||..+|+.+-.++..+. ..+.......++. ..
T Consensus 242 ~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~ 321 (689)
T 1yiq_A 242 YDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKV 321 (689)
T ss_dssp EETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEE
T ss_pred EcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEE
Confidence 5677888888877763 99999999999988764211 1111122222442 36
Q ss_pred EEEEeCCCeEEEEECCCCCceeEEeccC---------------------------CC-----------CeEEEEEcCCCC
Q 006743 53 LVTAGDDGTLHLWDTTGRSPKVSWLKQH---------------------------SA-----------PTAGISFSSDDK 94 (633)
Q Consensus 53 LaSGs~DGtI~IWDl~t~~~~v~~l~~H---------------------------~~-----------~VtsLafSPdg~ 94 (633)
++.++.+|.++++|..+++.....-... .. .-..++|+|+..
T Consensus 322 v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~ 401 (689)
T 1yiq_A 322 LMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTG 401 (689)
T ss_dssp EEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCC
Confidence 8889999999999999888532111110 00 011268888877
Q ss_pred EEEEEeC---------------------------------------------CCeEEEEeCCCCceeeEeeCCCCeEEEE
Q 006743 95 IIASVGL---------------------------------------------DKKLYTYDPGSRRPSSCITYEAPFSSLA 129 (633)
Q Consensus 95 ~LaSgS~---------------------------------------------DGtVrIWDlrtgk~v~~i~h~~~ItsLa 129 (633)
++++... +|.|+.||+.+++.+..+.+..++....
T Consensus 402 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~ 481 (689)
T 1yiq_A 402 LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGT 481 (689)
T ss_dssp EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCE
T ss_pred EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCcc
Confidence 7776532 3789999999999887776555555556
Q ss_pred EecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCe
Q 006743 130 FIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPV 181 (633)
Q Consensus 130 fSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~ 181 (633)
+...+..|++|+.||.|+.||.++++. +..+.. .+.....-+.|..+|+.
T Consensus 482 ~~tagglvf~gt~dg~l~a~D~~tG~~-lw~~~~-~~~~~~~p~ty~~~G~q 531 (689)
T 1yiq_A 482 LSTAGNLVFEGSADGRVIAYAADTGEK-LWEQPA-ASGVMAAPVTYSVDGEQ 531 (689)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCE-EEEEEC-SSCCCSCCEEEEETTEE
T ss_pred ceECCCEEEEECCCCcEEEEECCCCcc-ceeeeC-CCCcccCceEEEECCEE
Confidence 667788999999999999999999853 333332 22222334566666543
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.40 E-value=6e-06 Score=90.04 Aligned_cols=196 Identities=12% Similarity=0.074 Sum_probs=129.8
Q ss_pred CccCCCCEEEEEEC--CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE---
Q 006743 1 MYNCKDEHLASISL--SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS--- 75 (633)
Q Consensus 1 AFSpdG~~LaSgs~--DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~--- 75 (633)
+|+|||++|+++.. ++.|.+.|+.+++.+..+... .. ....|++...+++.+.||.+.+.+....+....
T Consensus 183 ~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~--g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~ 257 (426)
T 3c75_H 183 ALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP--DC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTE 257 (426)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--SE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECC
T ss_pred EEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC--Cc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeee
Confidence 47899999999874 578999999999999888742 21 234455545777888899988888855442211
Q ss_pred EeccCCCCe-EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeE--ee-----------CCCCeEEEEEecCCCEEEEEE
Q 006743 76 WLKQHSAPT-AGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC--IT-----------YEAPFSSLAFIDDDWILTAGT 141 (633)
Q Consensus 76 ~l~~H~~~V-tsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~--i~-----------h~~~ItsLafSPdG~~LatGs 141 (633)
.+.....++ ..+.|.+++..++.....+.|.+.|+........ +. .......++++|+++.+++..
T Consensus 258 ~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~ 337 (426)
T 3c75_H 258 VFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLV 337 (426)
T ss_dssp CCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEE
T ss_pred eeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEe
Confidence 111111221 2356788888888888899999999876543211 11 112223478999998877765
Q ss_pred c----------CCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCC-eEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 142 S----------NGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKP-VFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 142 ~----------DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~-~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
. ++.|.++|..+. +.+..+.. .....++.|+|+++ .+++ +...++.|.++|+..
T Consensus 338 ~~~~~gthk~~s~~VsVID~~T~-kvv~~I~v---g~~P~gia~spDg~~~lyv-----------~n~~s~~VsVID~~t 402 (426)
T 3c75_H 338 DQRDEWKHKAASRFVVVLNAETG-ERINKIEL---GHEIDSINVSQDAEPLLYA-----------LSAGTQTLHIYDAAT 402 (426)
T ss_dssp EECCTTCTTSCEEEEEEEETTTC-CEEEEEEE---EEEECEEEECCSSSCEEEE-----------EETTTTEEEEEETTT
T ss_pred cccccccccCCCCEEEEEECCCC-eEEEEEEC---CCCcCeEEEccCCCEEEEE-----------EcCCCCeEEEEECCC
Confidence 3 357999999988 34444442 23588999999765 3333 233588888998876
Q ss_pred CCCCCc
Q 006743 211 SVTTSS 216 (633)
Q Consensus 211 ~~~~ss 216 (633)
.....+
T Consensus 403 ~kvv~t 408 (426)
T 3c75_H 403 GEELRS 408 (426)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 655433
No 227
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.39 E-value=7.9e-06 Score=92.21 Aligned_cols=192 Identities=10% Similarity=-0.043 Sum_probs=134.1
Q ss_pred CCCCEEEEEECC-CcEEEEECCCCceeEEEeCCCCCcEEEEEE-c-cCCCeEEEEEe------------------CCCeE
Q 006743 4 CKDEHLASISLS-GDLILHNLASGAKAAELKDPNEQVLRVLDY-S-RNSRHLLVTAG------------------DDGTL 62 (633)
Q Consensus 4 pdG~~LaSgs~D-G~I~IWDl~tgk~v~~~~~~~~~~VssLaf-S-pdg~~lLaSGs------------------~DGtI 62 (633)
+||++|++...+ +.|.+.|+.+.++...+..........+++ . |+++ ++++++ .++.+
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCc-EEEEecccccccCCCCcccccccccCceE
Confidence 478888887764 569999999999888665445556778887 4 8888 455553 35689
Q ss_pred EEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCC--------------------------------------e
Q 006743 63 HLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDK--------------------------------------K 104 (633)
Q Consensus 63 ~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DG--------------------------------------t 104 (633)
.+.|..+.+.. ..+.... .-..++++|+|+++++.+.+. .
T Consensus 178 tvID~~t~~v~-~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 178 TAVDADKWEVA-WQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEETTTTEEE-EEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEECCCCeEE-EEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 99999987643 3332222 346688999999999888553 4
Q ss_pred EEEEeCCC--Cce-eeEeeCCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCCCCc--------eEEEeecCCCCCeeE
Q 006743 105 LYTYDPGS--RRP-SSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQP--------LTVLRACSSSEAVSS 172 (633)
Q Consensus 105 VrIWDlrt--gk~-v~~i~h~~~ItsLafSPdG~~LatGs-~DGsV~IWDlrs~~k~--------v~~l~~~~H~~~Vts 172 (633)
|.+.|.++ ++. +..+.......++.++|||+++++++ .+.+|.+||+.+.+.. ........-......
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h 335 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH 335 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEE
T ss_pred EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcce
Confidence 77888887 545 55666566778899999999888766 5789999999864210 011122233456888
Q ss_pred EEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCC
Q 006743 173 LCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (633)
Q Consensus 173 LafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~ 210 (633)
++|+++| ..+++.-.|+.|.+||+..
T Consensus 336 ~aF~~dG------------~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 336 TAFDGRG------------NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEECTTS------------EEEEEETTTTEEEEEEHHH
T ss_pred EEECCCC------------eEEEEEecCCcEEEEEhhH
Confidence 9999964 3445556688888898754
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.38 E-value=2.6e-06 Score=91.07 Aligned_cols=172 Identities=13% Similarity=0.035 Sum_probs=113.3
Q ss_pred CccCCCCEEEEEE----------CCCcEEEEECCCCceeEEEeCCC------CCcEEEEEEccCCCeEEEEEeC--CCeE
Q 006743 1 MYNCKDEHLASIS----------LSGDLILHNLASGAKAAELKDPN------EQVLRVLDYSRNSRHLLVTAGD--DGTL 62 (633)
Q Consensus 1 AFSpdG~~LaSgs----------~DG~I~IWDl~tgk~v~~~~~~~------~~~VssLafSpdg~~lLaSGs~--DGtI 62 (633)
+|+|||++++++. .++.|.+||+.+++.+..+..+. ......++++|+|+. ++.+.. +..|
T Consensus 71 ~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~-lyVan~~~~~~v 149 (368)
T 1mda_H 71 VAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSAC-LLFFLFGSSAAA 149 (368)
T ss_dssp EECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSC-EEEEECSSSCEE
T ss_pred EECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCE-EEEEccCCCCeE
Confidence 4799999998886 36889999999999999886320 012235889999984 555543 4567
Q ss_pred EE--EECCC------CCc--------------------eeEEecc-----------------------------------
Q 006743 63 HL--WDTTG------RSP--------------------KVSWLKQ----------------------------------- 79 (633)
Q Consensus 63 ~I--WDl~t------~~~--------------------~v~~l~~----------------------------------- 79 (633)
.+ +|..+ ..+ ....+..
T Consensus 150 ~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs 229 (368)
T 1mda_H 150 GLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV 229 (368)
T ss_dssp EEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB
T ss_pred EEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEc
Confidence 77 77632 000 0000000
Q ss_pred -----------CC---------------------CCeEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCCceeeE
Q 006743 80 -----------HS---------------------APTAGISFSSDDKIIASVGL---------DKKLYTYDPGSRRPSSC 118 (633)
Q Consensus 80 -----------H~---------------------~~VtsLafSPdg~~LaSgS~---------DGtVrIWDlrtgk~v~~ 118 (633)
.. .....++++|++++++++.. ++.+.++|+.+++.+..
T Consensus 230 ~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~ 309 (368)
T 1mda_H 230 ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP 309 (368)
T ss_dssp SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEEC
T ss_pred CCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEE
Confidence 00 00011678898888887643 23567999999999888
Q ss_pred eeCCCCeEEEEEecCCCE-EEEEE-cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEcc
Q 006743 119 ITYEAPFSSLAFIDDDWI-LTAGT-SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR 177 (633)
Q Consensus 119 i~h~~~ItsLafSPdG~~-LatGs-~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsP 177 (633)
+.......+++|+|||++ +++.. .++.|.++|+.+. +.+..+. -.....++++++
T Consensus 310 i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~-kvv~~I~---vg~~P~~i~~~~ 366 (368)
T 1mda_H 310 ISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD-QDQSSVE---LDKGPESLSVQN 366 (368)
T ss_dssp CEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSC-EEEEECC---CCSCCCEEECCC
T ss_pred EECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCC-cEEEEEE---CCCCCCEEEeec
Confidence 866667999999999985 55555 5899999999987 3333333 334455666544
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.38 E-value=1.2e-05 Score=92.30 Aligned_cols=178 Identities=12% Similarity=0.187 Sum_probs=121.1
Q ss_pred ccCCCCEEEEEECCC-------------------cEEEEECCCCceeEEEeCCCC--------CcEEEEEEccCCC--eE
Q 006743 2 YNCKDEHLASISLSG-------------------DLILHNLASGAKAAELKDPNE--------QVLRVLDYSRNSR--HL 52 (633)
Q Consensus 2 FSpdG~~LaSgs~DG-------------------~I~IWDl~tgk~v~~~~~~~~--------~~VssLafSpdg~--~l 52 (633)
|+++++.|+.+..++ .|..+|..+|+.+-.++..+. .....+....+|+ ..
T Consensus 250 ~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~ 329 (677)
T 1kb0_A 250 FDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKV 329 (677)
T ss_dssp EETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEE
T ss_pred EcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeE
Confidence 467788888877654 499999999999888764221 1112233344662 47
Q ss_pred EEEEeCCCeEEEEECCCCCceeEEeccC----------CCCe------------------------EEEEEcCCCCEEEE
Q 006743 53 LVTAGDDGTLHLWDTTGRSPKVSWLKQH----------SAPT------------------------AGISFSSDDKIIAS 98 (633)
Q Consensus 53 LaSGs~DGtI~IWDl~t~~~~v~~l~~H----------~~~V------------------------tsLafSPdg~~LaS 98 (633)
++.++.+|.|+++|..+++.....-... ...+ ..++++|+..++++
T Consensus 330 l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv 409 (677)
T 1kb0_A 330 ILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYL 409 (677)
T ss_dssp EEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEE
T ss_pred EEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEE
Confidence 8999999999999999888532211110 0111 14688998888877
Q ss_pred EeCC-------------------------------------------CeEEEEeCCCCceeeEeeCCCCeEEEEEecCCC
Q 006743 99 VGLD-------------------------------------------KKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDW 135 (633)
Q Consensus 99 gS~D-------------------------------------------GtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~ 135 (633)
...+ +.|..||+.+++.+..+.+..++....+..++.
T Consensus 410 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~ 489 (677)
T 1kb0_A 410 PAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGN 489 (677)
T ss_dssp EEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTT
T ss_pred eChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCC
Confidence 6432 789999999999888877666666666777888
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCe
Q 006743 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPV 181 (633)
Q Consensus 136 ~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~ 181 (633)
.+++++.||.|++||.++++ .+..+.. .+.....-+.|..+|+.
T Consensus 490 ~v~~g~~dg~l~a~D~~tG~-~lw~~~~-~~~~~~~p~~y~~~G~~ 533 (677)
T 1kb0_A 490 VVFQGTADGRLVAYHAATGE-KLWEAPT-GTGVVAAPSTYMVDGRQ 533 (677)
T ss_dssp EEEEECTTSEEEEEETTTCC-EEEEEEC-SSCCCSCCEEEEETTEE
T ss_pred EEEEECCCCcEEEEECCCCc-eeeeeeC-CCCcccCCEEEEeCCEE
Confidence 99999999999999999984 3344432 23333344555566543
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.32 E-value=0.00035 Score=69.26 Aligned_cols=152 Identities=10% Similarity=0.027 Sum_probs=100.7
Q ss_pred CccCCCCEEEEEE-CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 1 MYNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 1 AFSpdG~~LaSgs-~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
+|+++++.|+.+. .++.|.++++........+.. .......+++.+++.+++++-...+.|.+++..+.... .....
T Consensus 42 ~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~-~~~~~ 119 (267)
T 1npe_A 42 AFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQ-DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-VLFDT 119 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEESSSCCCEEEECT-TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECS
T ss_pred EEecCCCEEEEEECCCCEEEEEecCCCCcEEEEEC-CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE-EEEEC
Confidence 3567666666555 467899999865544333322 22456789999977656667677889999999765422 22222
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCC
Q 006743 80 HSAPTAGISFSSDDKIIASVGL---DKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGK 154 (633)
Q Consensus 80 H~~~VtsLafSPdg~~LaSgS~---DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs-~DGsV~IWDlrs~ 154 (633)
.......++++|++..|+.+.. .+.|..+++......... ........+++++++..|..+. ..+.|.++|+...
T Consensus 120 ~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 120 GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 2356789999996666655554 368888888643322222 2234688999999877766555 5688999999754
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.31 E-value=0.00019 Score=71.29 Aligned_cols=187 Identities=12% Similarity=0.044 Sum_probs=117.2
Q ss_pred CCEEEEEECCCcEEEEECCCCcee-----EEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 6 DEHLASISLSGDLILHNLASGAKA-----AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 6 G~~LaSgs~DG~I~IWDl~tgk~v-----~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
|.+|+.+.. +.|+.+++...... ..+.. .......++|++++..++++-..++.|.+++..+... ...+...
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~-~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~ 77 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHI-PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTIIRQD 77 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEE-EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEECTT
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecC-CCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEEEECC
Confidence 445666653 57999998654321 11111 1234567999997776777766789999999987653 2233333
Q ss_pred CCCeEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCceeeEeeC-CCCeEEEEEecCCCEEEEEEc---CCeEEEEECCCCC
Q 006743 81 SAPTAGISFSSDDKIIA-SVGLDKKLYTYDPGSRRPSSCITY-EAPFSSLAFIDDDWILTAGTS---NGRVVFYDIRGKP 155 (633)
Q Consensus 81 ~~~VtsLafSPdg~~La-SgS~DGtVrIWDlrtgk~v~~i~h-~~~ItsLafSPdG~~LatGs~---DGsV~IWDlrs~~ 155 (633)
.....++++++++..|+ +-...+.|.++|+........... ......++++|++..|+.+.. .+.|+.+++....
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~ 157 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN 157 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC
Confidence 35789999999655554 445567999999875433333322 256789999997666665554 3689999987542
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 156 k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
. ..+.. ........+++++++..| +++....+.|.++|+.
T Consensus 158 ~--~~~~~-~~~~~P~gia~d~~~~~l-----------yv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 158 R--RILAQ-DNLGLPNGLTFDAFSSQL-----------CWVDAGTHRAECLNPA 197 (267)
T ss_dssp C--EEEEC-TTCSCEEEEEEETTTTEE-----------EEEETTTTEEEEEETT
T ss_pred c--EEEEE-CCCCCCcEEEEcCCCCEE-----------EEEECCCCEEEEEecC
Confidence 2 22221 223467889998864444 3444445667666653
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.29 E-value=3.2e-05 Score=84.74 Aligned_cols=181 Identities=12% Similarity=0.053 Sum_probs=119.7
Q ss_pred ccCCCCEEEEEECC------CcEEEEECCCCceeEEEeCCC--CCcEEEEEEccCCCeEEEEEe----------------
Q 006743 2 YNCKDEHLASISLS------GDLILHNLASGAKAAELKDPN--EQVLRVLDYSRNSRHLLVTAG---------------- 57 (633)
Q Consensus 2 FSpdG~~LaSgs~D------G~I~IWDl~tgk~v~~~~~~~--~~~VssLafSpdg~~lLaSGs---------------- 57 (633)
..|+| .++++..+ |.|.++|.++.+.+..+.... ...-..+.|+|+++ .+++..
T Consensus 145 ~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~ 222 (462)
T 2ece_A 145 CGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHL 222 (462)
T ss_dssp ECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTH
T ss_pred ECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhh
Confidence 35788 66665444 789999999999998886321 12233478899998 677764
Q ss_pred ---CCCeEEEEECCCCCceeEEeccC--CCCeEEEEE--cCCCCEEEEEeC------CCeEEEEeCCCCce--eeEe--e
Q 006743 58 ---DDGTLHLWDTTGRSPKVSWLKQH--SAPTAGISF--SSDDKIIASVGL------DKKLYTYDPGSRRP--SSCI--T 120 (633)
Q Consensus 58 ---~DGtI~IWDl~t~~~~v~~l~~H--~~~VtsLaf--SPdg~~LaSgS~------DGtVrIWDlrtgk~--v~~i--~ 120 (633)
.+..|.+||+.+.+ .+..+... ......+.| +|+++++++++. +++|.+|....++. ...+ .
T Consensus 223 ~~~~~d~V~v~D~~~~k-~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~ 301 (462)
T 2ece_A 223 KDRYGNRIHFWDLRKRK-RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIP 301 (462)
T ss_dssp HHHSCCEEEEEETTTTE-EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred hhccCCEEEEEECCCCc-EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCC
Confidence 37899999998765 34444432 123455656 999999888774 55787665544321 1111 0
Q ss_pred C-----------------CCCeEEEEEecCCCEEEEEEc-CCeEEEEECCCCCC--ceEEEeecCC------------CC
Q 006743 121 Y-----------------EAPFSSLAFIDDDWILTAGTS-NGRVVFYDIRGKPQ--PLTVLRACSS------------SE 168 (633)
Q Consensus 121 h-----------------~~~ItsLafSPdG~~LatGs~-DGsV~IWDlrs~~k--~v~~l~~~~H------------~~ 168 (633)
. ...+..+.+++||++|.++.. .+.|.+||+..... .+..+..-+. .+
T Consensus 302 ~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~g 381 (462)
T 2ece_A 302 AEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTG 381 (462)
T ss_dssp CEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCS
T ss_pred CccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCC
Confidence 0 245788999999999998876 68899999864322 2233322111 01
Q ss_pred CeeEEEEccCCCeEEEe
Q 006743 169 AVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 169 ~VtsLafsPdg~~Las~ 185 (633)
.-..++++|+|++|+..
T Consensus 382 gPr~~~lSpDGk~LyVa 398 (462)
T 2ece_A 382 APQMLEISRDGRRVYVT 398 (462)
T ss_dssp CCCCEEECTTSSEEEEE
T ss_pred CCCEEEEcCCCCEEEEE
Confidence 35889999999888776
No 233
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.29 E-value=5.7e-05 Score=77.34 Aligned_cols=166 Identities=11% Similarity=0.051 Sum_probs=112.6
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeE
Q 006743 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTA 85 (633)
Q Consensus 6 G~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~Vt 85 (633)
+.++++.+.+|.|+++|+++++.+..+ -.....-..+++ +++.+++..-.++.+.+||..+.+. +..+..- ..-.
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~-~~ti~~~-~eGw 139 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQR-ERTTRYS-GEGW 139 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEE-EEEEECS-SCCC
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcE-EEEEeCC-Ccee
Confidence 445556677889999999999988877 222211122444 4555777777899999999998874 3344322 2224
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeC---C---CCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006743 86 GISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---E---APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (633)
Q Consensus 86 sLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h---~---~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~ 159 (633)
.++ ++++.|+....++.|.++|..+.+.+..+.. . ..++.+.|. +|+..+..-.++.|.+.|.+++ +.+.
T Consensus 140 GLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG-~V~~ 215 (268)
T 3nok_A 140 GLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATG-TVVG 215 (268)
T ss_dssp CEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTC-BEEE
T ss_pred EEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCC-cEEE
Confidence 444 4578888888899999999999988877742 1 245677887 6754444445789999999988 4555
Q ss_pred EEeec-----------CCCCCeeEEEEccCCC
Q 006743 160 VLRAC-----------SSSEAVSSLCWQRAKP 180 (633)
Q Consensus 160 ~l~~~-----------~H~~~VtsLafsPdg~ 180 (633)
.+... .-......|+|+|+++
T Consensus 216 ~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~ 247 (268)
T 3nok_A 216 VIDASALTRAVAGQVTNPEAVLNGIAVEPGSG 247 (268)
T ss_dssp EEECHHHHHHHTTTCCCTTCCEEEEEECTTTC
T ss_pred EEECCCCcccccccccCcCCceEEEEEcCCCC
Confidence 55532 1224678999999643
No 234
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.25 E-value=0.00016 Score=73.92 Aligned_cols=177 Identities=10% Similarity=0.087 Sum_probs=113.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCC-------------------CCcEEEEEEcc-CCCeEEEEEeCCC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPN-------------------EQVLRVLDYSR-NSRHLLVTAGDDG 60 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~-------------------~~~VssLafSp-dg~~lLaSGs~DG 60 (633)
+|+++|++++++..++.|..||..+++.. .+.... ......|++.+ +++ |+.+...+
T Consensus 25 ~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~--l~v~d~~~ 101 (322)
T 2fp8_A 25 TFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ--LYIVDCYY 101 (322)
T ss_dssp ECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE--EEEEETTT
T ss_pred EEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc--EEEEECCC
Confidence 46788887888888999999998665433 222100 12357789987 554 55555556
Q ss_pred eEEEEECCCCCceeEEecc-----CCCCeEEEEEcC-CCCEEEEEeC-----------------CCeEEEEeCCCCceee
Q 006743 61 TLHLWDTTGRSPKVSWLKQ-----HSAPTAGISFSS-DDKIIASVGL-----------------DKKLYTYDPGSRRPSS 117 (633)
Q Consensus 61 tI~IWDl~t~~~~v~~l~~-----H~~~VtsLafSP-dg~~LaSgS~-----------------DGtVrIWDlrtgk~v~ 117 (633)
.|.++|..++.. ..+.. .....+.+++.+ +|+++++-.. ++.|..||..+++...
T Consensus 102 ~i~~~d~~~g~~--~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 102 HLSVVGSEGGHA--TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp EEEEECTTCEEC--EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CEEEEeCCCCEE--EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 688888775432 22211 123578899999 8987766432 3679999988776544
Q ss_pred EeeCCCCeEEEEEecCCCEEEEE-EcCCeEEEEECCCCCC-ceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006743 118 CITYEAPFSSLAFIDDDWILTAG-TSNGRVVFYDIRGKPQ-PLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 118 ~i~h~~~ItsLafSPdG~~LatG-s~DGsV~IWDlrs~~k-~v~~l~~~~H~~~VtsLafsPdg~~Las~ 185 (633)
..........++|++++++|+++ ..++.|++||+..... ....+.. ..+ ...++++++|.+.++.
T Consensus 180 ~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 180 LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEEEEE
T ss_pred eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEEEEe
Confidence 43333456679999999877665 4568999999875321 1222221 223 7788888877655544
No 235
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.23 E-value=0.0002 Score=72.44 Aligned_cols=166 Identities=10% Similarity=0.109 Sum_probs=110.2
Q ss_pred CCEEEEEECC--CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCC
Q 006743 6 DEHLASISLS--GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAP 83 (633)
Q Consensus 6 G~~LaSgs~D--G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~ 83 (633)
+.++.+.+.+ ..|+++|+++++.+..+.......--.+++ .++++++..-.++.+.+||..+.+. +..+... ..
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~--~~~~ly~ltw~~~~v~v~D~~tl~~-~~ti~~~-~~ 106 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA--WRDRLIQLTWRNHEGFVYDLATLTP-RARFRYP-GE 106 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTTEE-EEEEECS-SC
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEE--eCCEEEEEEeeCCEEEEEECCcCcE-EEEEeCC-CC
Confidence 4444555554 489999999999998887433222122333 3455677777899999999998874 3444322 22
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCC------CCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc
Q 006743 84 TAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYE------APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (633)
Q Consensus 84 VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~------~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~ 157 (633)
=..++ +++..|+....++.|.++|..+.+.+..+... ..++.+.|. +|+..+..-.+..|.+.|.+++ +.
T Consensus 107 Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG-~V 182 (243)
T 3mbr_X 107 GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASG-KV 182 (243)
T ss_dssp CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTC-BE
T ss_pred ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCC-CE
Confidence 24554 45677777777899999999999888777421 345667776 5655544446789999999998 45
Q ss_pred eEEEeecC-----------CCCCeeEEEEccCC
Q 006743 158 LTVLRACS-----------SSEAVSSLCWQRAK 179 (633)
Q Consensus 158 v~~l~~~~-----------H~~~VtsLafsPdg 179 (633)
+..+...+ ......+|+|+|++
T Consensus 183 ~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~ 215 (243)
T 3mbr_X 183 VAWIDLQALVPDADALTDSTNDVLNGIAFDAEH 215 (243)
T ss_dssp EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT
T ss_pred EEEEECCcCccccccccCCcCCceEEEEEcCCC
Confidence 55554321 12356889999964
No 236
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.21 E-value=2.2e-05 Score=83.98 Aligned_cols=91 Identities=4% Similarity=-0.035 Sum_probs=68.5
Q ss_pred cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEe---------CCCeEEEEECCCCCceeEEeccC-------
Q 006743 17 DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWDTTGRSPKVSWLKQH------- 80 (633)
Q Consensus 17 ~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs---------~DGtI~IWDl~t~~~~v~~l~~H------- 80 (633)
+|.++|..+++.+..+..... . .+.++|+++.++++.. .++.|.+||..+.+. +..+..+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v-v~~I~v~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP-IADIELPDAPRFSV 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE-EEEEEETTSCSCCB
T ss_pred eEEEEECCCCeEEEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE-EEEEECCCcccccc
Confidence 888999999999999875443 3 5899999985554442 478999999999885 4444332
Q ss_pred CCCeEEEEEcCCCCEEEEEeC--CCeEEE--EeCC
Q 006743 81 SAPTAGISFSSDDKIIASVGL--DKKLYT--YDPG 111 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~--DGtVrI--WDlr 111 (633)
......++++||+++++++.. +..|.+ +|+.
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchh
Confidence 134578999999999998875 356777 8773
No 237
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.15 E-value=9.2e-05 Score=80.70 Aligned_cols=144 Identities=6% Similarity=-0.014 Sum_probs=104.4
Q ss_pred CCCCEEEEEECC-----CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEe---------CCCeEEEEECCC
Q 006743 4 CKDEHLASISLS-----GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWDTTG 69 (633)
Q Consensus 4 pdG~~LaSgs~D-----G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs---------~DGtI~IWDl~t 69 (633)
++++++++.... +.|.++|..+++.+..+.... .. .++++|+++.++++.. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~-~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF-LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS-SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC-CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 466777766553 699999999999999887533 23 6899999985555532 477999999998
Q ss_pred CCceeEEeccC-------CCCeEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceeeEeeCCCCeEEEEEecCC-CEEEE
Q 006743 70 RSPKVSWLKQH-------SAPTAGISFSSDDKIIASVGL--DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDD-WILTA 139 (633)
Q Consensus 70 ~~~~v~~l~~H-------~~~VtsLafSPdg~~LaSgS~--DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG-~~Lat 139 (633)
.+. +..+.-. ......++|+||+++++++.. ++.|.++|+.+++.+..+...+. ....|++ ..+++
T Consensus 159 ~~v-v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~ 234 (426)
T 3c75_H 159 FLP-IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYM 234 (426)
T ss_dssp CCE-EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEE
T ss_pred CcE-EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEE
Confidence 874 3333211 234567899999999999874 57899999999999888764332 2334443 55666
Q ss_pred EEcCCeEEEEECCCC
Q 006743 140 GTSNGRVVFYDIRGK 154 (633)
Q Consensus 140 Gs~DGsV~IWDlrs~ 154 (633)
.+.||.+.+.+....
T Consensus 235 ~~~dG~~~~V~~~~~ 249 (426)
T 3c75_H 235 NCRDGSLARVDFADG 249 (426)
T ss_dssp EETTSSEEEEECCTT
T ss_pred EcCCCCEEEEECCCC
Confidence 777888888888443
No 238
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.14 E-value=3.6e-07 Score=96.79 Aligned_cols=145 Identities=14% Similarity=0.071 Sum_probs=77.7
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEE-EEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006743 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLR-VLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (633)
Q Consensus 3 SpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~Vs-sLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~ 81 (633)
..+|..+++++.||.|+.||.++|+.+..+..+....+. ...+. .+. .+++|+.|+.|+.||..+++.. -.+..+.
T Consensus 46 ~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~-w~~~~~~ 122 (369)
T 2hz6_A 46 HVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQ-QTLSSAF 122 (369)
T ss_dssp ----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC-------------
T ss_pred EcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCC-EEEEEeCCCEEEEEECCCCcEE-EEecCCC
Confidence 345667777789999999999999877665432111111 00111 233 5778888999999999988742 2222222
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCC---CEEEEEEcCCeEEEEECCCCC
Q 006743 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDD---WILTAGTSNGRVVFYDIRGKP 155 (633)
Q Consensus 82 ~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG---~~LatGs~DGsV~IWDlrs~~ 155 (633)
...++|++..+++++.|+.|+.||.++++.+..+.... ....++..+. ..+++++.||.|+.||.++++
T Consensus 123 ----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 123 ----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp --------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred ----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 23456788899999999999999999998765543111 1222333332 567788999999999999884
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.06 E-value=1.2e-05 Score=90.88 Aligned_cols=178 Identities=10% Similarity=-0.000 Sum_probs=117.4
Q ss_pred CCCCEEEEEE------------------CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC-----
Q 006743 4 CKDEHLASIS------------------LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG----- 60 (633)
Q Consensus 4 pdG~~LaSgs------------------~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DG----- 60 (633)
|+++++++++ .++.|.++|.++.+.+..+.... ....++++|+|+ ++++.+.+.
T Consensus 145 p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg--~pd~~~~spdGk-~~~vt~~~se~~~~ 221 (595)
T 1fwx_A 145 PRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG--NLDNCDADYEGK-WAFSTSYNSEKGMT 221 (595)
T ss_dssp SBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS--CCCCEEECSSSS-EEEEEESCTTCCSS
T ss_pred CCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC--CccceEECCCCC-EEEEEecCcccCcc
Confidence 8899998884 24579999999998888876322 234478899998 455544332
Q ss_pred ---------------------------------eEEEEECCC--CCceeEEeccCCCCeEEEEEcCCCCEEEEEe-CCCe
Q 006743 61 ---------------------------------TLHLWDTTG--RSPKVSWLKQHSAPTAGISFSSDDKIIASVG-LDKK 104 (633)
Q Consensus 61 ---------------------------------tI~IWDl~t--~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS-~DGt 104 (633)
.|.|.|..+ +...+..+.. .....++.++|||+++++++ .+.+
T Consensus 222 i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~ 300 (595)
T 1fwx_A 222 LPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPT 300 (595)
T ss_dssp HHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSB
T ss_pred hhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCe
Confidence 366667665 3321223322 23567899999999887766 5679
Q ss_pred EEEEeCCCCc------------eeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC---------CCceEEEee
Q 006743 105 LYTYDPGSRR------------PSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK---------PQPLTVLRA 163 (633)
Q Consensus 105 VrIWDlrtgk------------~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~---------~k~v~~l~~ 163 (633)
|.++|+.+.+ .+..+........++|+|+|...++..-|+.|.+||+... .+.+..+.
T Consensus 301 VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kid- 379 (595)
T 1fwx_A 301 VTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLD- 379 (595)
T ss_dssp EEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEE-
T ss_pred EEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEee-
Confidence 9999998653 3344456778999999999943445566999999998761 23344444
Q ss_pred cCCCCCe-----eEEEEccCCCeEEEecc
Q 006743 164 CSSSEAV-----SSLCWQRAKPVFIDETT 187 (633)
Q Consensus 164 ~~H~~~V-----tsLafsPdg~~Las~s~ 187 (633)
.|..+- .++.++|||++|++...
T Consensus 380 -V~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 380 -VHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp -CSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred -cccccccceeccceEeCCCCCEEEEcCC
Confidence 232221 22345788888776643
No 240
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.01 E-value=0.00039 Score=70.99 Aligned_cols=188 Identities=14% Similarity=0.133 Sum_probs=111.9
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeC----CCCCcEEEEEEcc-CCCeEEEEEeC-----------------C
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD----PNEQVLRVLDYSR-NSRHLLVTAGD-----------------D 59 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~----~~~~~VssLafSp-dg~~lLaSGs~-----------------D 59 (633)
+.+++..|+++...+.|..+|..+++ +..+.. ........+++.+ +|. ++++-.. +
T Consensus 87 ~~~~~g~l~v~d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~ 164 (322)
T 2fp8_A 87 YNLQNNQLYIVDCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKT 164 (322)
T ss_dssp EETTTTEEEEEETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCC
T ss_pred EcCCCCcEEEEECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCC
Confidence 34433455666555668888876543 222221 1123467799999 886 5554322 3
Q ss_pred CeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCc--eeeEe-eCCCCeEEEEEecCCC
Q 006743 60 GTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASV-GLDKKLYTYDPGSRR--PSSCI-TYEAPFSSLAFIDDDW 135 (633)
Q Consensus 60 GtI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSg-S~DGtVrIWDlrtgk--~v~~i-~h~~~ItsLafSPdG~ 135 (633)
+.|..||..+... ..+.......+.|+|++++++|+.+ ..++.|++||+.... ....+ ...+ ...++++++|+
T Consensus 165 g~v~~~d~~~~~~--~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~ 241 (322)
T 2fp8_A 165 GRLIKYDPSTKET--TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGH 241 (322)
T ss_dssp EEEEEEETTTTEE--EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSC
T ss_pred ceEEEEeCCCCEE--EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCC
Confidence 6788898876652 2222222445789999999866655 556899999987532 11122 2334 88899999998
Q ss_pred EEEEEEc----------CCeEEEEECCCCCCceEEEeecC-C-CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeE
Q 006743 136 ILTAGTS----------NGRVVFYDIRGKPQPLTVLRACS-S-SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSI 203 (633)
Q Consensus 136 ~LatGs~----------DGsV~IWDlrs~~k~v~~l~~~~-H-~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~I 203 (633)
+.++... .+.|..+|... +.+..+.... . -..++++++. ++.++++....+.|
T Consensus 242 l~va~~~~~~~~~~~~~~~~v~~~d~~G--~~~~~~~~~~g~~~~~~~~~~~~-------------~g~L~v~~~~~~~i 306 (322)
T 2fp8_A 242 FWVSSSEELDGNMHGRVDPKGIKFDEFG--NILEVIPLPPPFAGEHFEQIQEH-------------DGLLYIGTLFHGSV 306 (322)
T ss_dssp EEEEEEEETTSSTTSCEEEEEEEECTTS--CEEEEEECCTTTTTSCCCEEEEE-------------TTEEEEECSSCSEE
T ss_pred EEEEecCcccccccCCCccEEEEECCCC--CEEEEEECCCCCccccceEEEEe-------------CCEEEEeecCCCce
Confidence 7666544 46788888753 3334444221 0 1234555441 45666766677888
Q ss_pred EccCCC
Q 006743 204 LMPDPL 209 (633)
Q Consensus 204 kIWDlr 209 (633)
.++++.
T Consensus 307 ~~~~~~ 312 (322)
T 2fp8_A 307 GILVYD 312 (322)
T ss_dssp EEEEC-
T ss_pred EEEecc
Confidence 888764
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.97 E-value=0.00018 Score=82.50 Aligned_cols=195 Identities=9% Similarity=0.094 Sum_probs=120.9
Q ss_pred CCEEEEEEC------CCcEEEEECCCCceeEEEeCCCCC-------------------------------cEEEEEEccC
Q 006743 6 DEHLASISL------SGDLILHNLASGAKAAELKDPNEQ-------------------------------VLRVLDYSRN 48 (633)
Q Consensus 6 G~~LaSgs~------DG~I~IWDl~tgk~v~~~~~~~~~-------------------------------~VssLafSpd 48 (633)
+..+++++. +|.|+.||..+|+.+-.+...... ....+.+.++
T Consensus 174 ~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~ 253 (677)
T 1kb0_A 174 KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAE 253 (677)
T ss_dssp TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETT
T ss_pred CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCC
Confidence 445565553 689999999999998777532111 1124678888
Q ss_pred CCeEEEEEeCCC-------------------eEEEEECCCCCceeEE-eccCC-------CCeEEEEEcCCC---CEEEE
Q 006743 49 SRHLLVTAGDDG-------------------TLHLWDTTGRSPKVSW-LKQHS-------APTAGISFSSDD---KIIAS 98 (633)
Q Consensus 49 g~~lLaSGs~DG-------------------tI~IWDl~t~~~~v~~-l~~H~-------~~VtsLafSPdg---~~LaS 98 (633)
+. +++.+..++ .|..+|..+++..-+. ...|. .....+....+| ..++.
T Consensus 254 ~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~ 332 (677)
T 1kb0_A 254 LN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILH 332 (677)
T ss_dssp TT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEE
T ss_pred CC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEE
Confidence 77 677666554 5999999988843221 11221 122223333467 68999
Q ss_pred EeCCCeEEEEeCCCCceeeEeeCC-----------CC-e------------------------EEEEEecCCCEEEEEEc
Q 006743 99 VGLDKKLYTYDPGSRRPSSCITYE-----------AP-F------------------------SSLAFIDDDWILTAGTS 142 (633)
Q Consensus 99 gS~DGtVrIWDlrtgk~v~~i~h~-----------~~-I------------------------tsLafSPdG~~LatGs~ 142 (633)
++.+|.|+++|.++++.+..+... +. + ..++++|++.++++...
T Consensus 333 ~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~ 412 (677)
T 1kb0_A 333 APKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQ 412 (677)
T ss_dssp CCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEE
T ss_pred ECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeCh
Confidence 999999999999999987655311 00 1 15688998888877643
Q ss_pred C-------------------------------------------CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCC
Q 006743 143 N-------------------------------------------GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAK 179 (633)
Q Consensus 143 D-------------------------------------------GsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg 179 (633)
+ |.|+.||+.+++.. ..+. +..++.+..+...
T Consensus 413 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~-W~~~---~~~~~~~g~~~~~- 487 (677)
T 1kb0_A 413 NVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAA-WSVE---HVSPWNGGTLTTA- 487 (677)
T ss_dssp ECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEE-EEEE---ESSSCCCCEEEET-
T ss_pred hcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEE-eecC---CCCCCcCcceEeC-
Confidence 2 67999999887422 2222 2222222222221
Q ss_pred CeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCCCCcc
Q 006743 180 PVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSV 217 (633)
Q Consensus 180 ~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~~ss~ 217 (633)
++ +++.++.|+.+++||...-......
T Consensus 488 ----------g~-~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 488 ----------GN-VVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp ----------TT-EEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ----------CC-EEEEECCCCcEEEEECCCCceeeee
Confidence 33 3444577999999999765554443
No 242
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.96 E-value=0.00061 Score=69.66 Aligned_cols=170 Identities=12% Similarity=0.027 Sum_probs=104.6
Q ss_pred ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeC--CCeEEEEECCCCCceeEEec-cCCCCeEEEEEcCCCCEEEE-EeCC
Q 006743 27 AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD--DGTLHLWDTTGRSPKVSWLK-QHSAPTAGISFSSDDKIIAS-VGLD 102 (633)
Q Consensus 27 k~v~~~~~~~~~~VssLafSpdg~~lLaSGs~--DGtI~IWDl~t~~~~v~~l~-~H~~~VtsLafSPdg~~LaS-gS~D 102 (633)
+.+.++..........+.|++++. ++++.+. ++.|.++|+.+++.. ..+. ........+++. ++.|+. .-.+
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~v~-~~i~l~~~~fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGKVE-NIHKMDDSYFGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCCEE-EEEECCTTCCEEEEEEE--TTEEEEEETTC
T ss_pred eEEEEEECCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCCEE-EEEecCCCcceEEEEEe--CCEEEEEEecC
Confidence 455666532223457899999864 5555543 689999999998843 3332 222233456665 445544 4467
Q ss_pred CeEEEEeCCCCceeeEeeCC-CCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCC---CeeEEEEccC
Q 006743 103 KKLYTYDPGSRRPSSCITYE-APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSE---AVSSLCWQRA 178 (633)
Q Consensus 103 GtVrIWDlrtgk~v~~i~h~-~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~---~VtsLafsPd 178 (633)
+.+.++|..+.+.+..+... ..- ..+++||+.++++..++.|+++|..+.+ ....+....+.. .+..+.|. +
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~-v~~~I~Vg~~~~p~~~~nele~~-d 161 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFK-LIKKHNVKYNGHRVIRLNELEYI-N 161 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEE-T
T ss_pred CEEEEEECCCCcEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCc-EEEEEEECCCCcccccceeEEEE-C
Confidence 89999999999998888654 332 3455688888888888999999998873 334433211111 24566665 3
Q ss_pred CCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCCCCCc
Q 006743 179 KPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (633)
Q Consensus 179 g~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~~~ss 216 (633)
+ .+++....++.|.+.|+........
T Consensus 162 g------------~lyvn~~~~~~V~vID~~tg~V~~~ 187 (266)
T 2iwa_A 162 G------------EVWANIWQTDCIARISAKDGTLLGW 187 (266)
T ss_dssp T------------EEEEEETTSSEEEEEETTTCCEEEE
T ss_pred C------------EEEEecCCCCeEEEEECCCCcEEEE
Confidence 3 3333334456666666655444333
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.96 E-value=0.0005 Score=70.37 Aligned_cols=142 Identities=12% Similarity=0.123 Sum_probs=93.6
Q ss_pred eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 006743 28 KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYT 107 (633)
Q Consensus 28 ~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrI 107 (633)
.+.++......-...+.|.. ..++++.+.+|.|+++|+.+++..... ......-..+++. .+++++..-.++.+.+
T Consensus 45 Vv~~~phd~~~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~-g~~Ly~ltw~~~~v~V 120 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD-GERLYQLTWTEGLLFT 120 (268)
T ss_dssp EEEEEECCTTCCEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC-SSCEEEEESSSCEEEE
T ss_pred EEEEEcCCCccccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe-CCEEEEEEccCCEEEE
Confidence 44556432344557788873 458888899999999999998854433 2221122345554 2344455557889999
Q ss_pred EeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCC---CeeEEEEc
Q 006743 108 YDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSE---AVSSLCWQ 176 (633)
Q Consensus 108 WDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~---~VtsLafs 176 (633)
||..+.+.+..+.....-..++ +|++.|+.+..++.|+++|..+.+ .+..+....+.. .+..+.|.
T Consensus 121 ~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~-v~~~I~V~~~g~~v~~lNeLe~~ 189 (268)
T 3nok_A 121 WSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFA-LVGAVQVKLRGQPVELINELECA 189 (268)
T ss_dssp EETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEE
T ss_pred EECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCe-EEEEEEeCCCCcccccccccEEe
Confidence 9999999999887655444555 568888888889999999999873 344444222222 23556665
No 244
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.94 E-value=0.00042 Score=80.24 Aligned_cols=149 Identities=7% Similarity=0.012 Sum_probs=91.7
Q ss_pred Ccc-CCCCEEEEEEC-CC----cEEEEECCCC-ceeEE-EeCCCCCcEEEEEEccCCCeEEEEEeCC----CeEEEEECC
Q 006743 1 MYN-CKDEHLASISL-SG----DLILHNLASG-AKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDD----GTLHLWDTT 68 (633)
Q Consensus 1 AFS-pdG~~LaSgs~-DG----~I~IWDl~tg-k~v~~-~~~~~~~~VssLafSpdg~~lLaSGs~D----GtI~IWDl~ 68 (633)
+|+ |||++||.+.. +| .|+++|+.++ +.+.. +. .....++|+||++.++++...+ ..|+++++.
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~----~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lg 255 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS----GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMG 255 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE----EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETT
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc----CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECC
Confidence 378 99998886543 33 4999999988 63211 11 1223578999998555554332 368888887
Q ss_pred CCCce-eEEec-cCCCCeEEEEEcCCCCEEEEEeC---CCeEEEEeCCCC--ce--eeEee-CCCCeEEEEEecCCCEEE
Q 006743 69 GRSPK-VSWLK-QHSAPTAGISFSSDDKIIASVGL---DKKLYTYDPGSR--RP--SSCIT-YEAPFSSLAFIDDDWILT 138 (633)
Q Consensus 69 t~~~~-v~~l~-~H~~~VtsLafSPdg~~LaSgS~---DGtVrIWDlrtg--k~--v~~i~-h~~~ItsLafSPdG~~La 138 (633)
+.... ...+. ........+.|+||+++|+.... ...|+++|+.++ +. ..... .......+.|+..+.+++
T Consensus 256 t~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~ 335 (751)
T 2xe4_A 256 KLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVI 335 (751)
T ss_dssp SCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEE
T ss_pred CCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEE
Confidence 65422 22222 23345678899999999887663 347899999875 23 22222 344556666654444444
Q ss_pred EEEcC----CeEEEEECCC
Q 006743 139 AGTSN----GRVVFYDIRG 153 (633)
Q Consensus 139 tGs~D----GsV~IWDlrs 153 (633)
....+ ..|+.+|+.+
T Consensus 336 ~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 336 LTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EECTTTCTTCEEEEEETTS
T ss_pred EeCCCCCCCcEEEEEcCCC
Confidence 44443 3677788764
No 245
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.94 E-value=0.0045 Score=63.68 Aligned_cols=185 Identities=8% Similarity=-0.057 Sum_probs=116.2
Q ss_pred EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC---CceeEEeccCCCCe
Q 006743 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR---SPKVSWLKQHSAPT 84 (633)
Q Consensus 8 ~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~---~~~v~~l~~H~~~V 84 (633)
+|+.+ ....|+..|+...+....+. .......++|.+.+..++++-..++.|+.+++.+. ......+...-...
T Consensus 3 ~ll~~-~~~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 3 YLFFT-NRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEE-CBSSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEE-CCCeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 34444 34679999998776555444 23445679999877657777777899999999761 21122333333456
Q ss_pred EEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEecCCCEEEEEEc-C-CeEEEEECCCCCCceEE
Q 006743 85 AGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTS-N-GRVVFYDIRGKPQPLTV 160 (633)
Q Consensus 85 tsLafSPd-g~~LaSgS~DGtVrIWDlrtgk~v~~i~-h~~~ItsLafSPdG~~LatGs~-D-GsV~IWDlrs~~k~v~~ 160 (633)
..+++.+. ++++++-..++.|.++|+........+. .......++++|.+..|+.... . +.|..+++.... ...
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~--~~~ 157 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IYS 157 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC--EEE
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC--eEE
Confidence 88999874 4455555677899999987554433333 3467899999997666655554 3 789999987642 122
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 161 l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
+.. ..-.....++|++++.. ++++....+.|..+|+.
T Consensus 158 ~~~-~~~~~P~gla~d~~~~~-----------lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 158 LVT-ENIQWPNGITLDLLSGR-----------LYWVDSKLHSISSIDVN 194 (316)
T ss_dssp EEC-SSCSCEEEEEEETTTTE-----------EEEEETTTTEEEEEETT
T ss_pred EEE-CCCCCceEEEEeccCCE-----------EEEEECCCCeEEEEecC
Confidence 221 23356789999986443 34444445666666653
No 246
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.94 E-value=0.00095 Score=69.25 Aligned_cols=143 Identities=11% Similarity=0.056 Sum_probs=95.7
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCC--------CCcEEE-EEEccCCCeEEEEEeCCCeEEEEECCCCCceeE
Q 006743 5 KDEHLASISLSGDLILHNLASGAKAAELKDPN--------EQVLRV-LDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (633)
Q Consensus 5 dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~--------~~~Vss-LafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~ 75 (633)
++..|++++.++.|..+|.++++.+..+.... ...+.. +.. ++. .++.++.++.|+.+|..+++..-
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~v~v~~~~g~l~a~d~~tG~~~W- 127 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGG-HVYIGSEKAQVYALNTSDGTVAW- 127 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETT-EEEEEETTSEEEEEETTTCCEEE-
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCC-EEEEEcCCCEEEEEECCCCCEEE-
Confidence 36678888889999999999999887665421 122322 222 233 57788899999999999887421
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCe------EEEEEecCCCEEEEEEcCCeEEEE
Q 006743 76 WLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPF------SSLAFIDDDWILTAGTSNGRVVFY 149 (633)
Q Consensus 76 ~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~I------tsLafSPdG~~LatGs~DGsV~IW 149 (633)
.............. .+..++.++.++.|..+|.++++.+........+ ...... +..++++..++.|+.+
T Consensus 128 ~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~ 203 (376)
T 3q7m_A 128 QTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAV 203 (376)
T ss_dssp EEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEE
T ss_pred EEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEE
Confidence 12222111111122 2557888999999999999999987766543332 122222 4578888899999999
Q ss_pred ECCCCC
Q 006743 150 DIRGKP 155 (633)
Q Consensus 150 Dlrs~~ 155 (633)
|.++++
T Consensus 204 d~~tG~ 209 (376)
T 3q7m_A 204 LMEQGQ 209 (376)
T ss_dssp ETTTCC
T ss_pred ECCCCc
Confidence 999874
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.90 E-value=0.00031 Score=70.61 Aligned_cols=136 Identities=15% Similarity=0.140 Sum_probs=94.6
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeE
Q 006743 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTA 85 (633)
Q Consensus 6 G~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~Vt 85 (633)
+..|.+++.++.|..+|.. ++....+.. ....+.++...+++. ++.++.++.|..||.. ++. ..........+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~-~~~~~~~~~~~~ 180 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKT-KKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTE-KWRFKTNDAITS 180 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCE-EEEEECSSCCCS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcC-CCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCE-eEEEecCCCcee
Confidence 4567778889999999987 777666553 333445566666665 6778888999999998 542 333334455677
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEecCCCEEEEEEcCCeEEEEECC
Q 006743 86 GISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIR 152 (633)
Q Consensus 86 sLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~-h~~~ItsLafSPdG~~LatGs~DGsV~IWDlr 152 (633)
++.+.+++.+++ ++ +.|..|| .+++...... ....+.++...++|. |.+++.++.|+.+|..
T Consensus 181 ~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~ 243 (330)
T 3hxj_A 181 AASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD 243 (330)
T ss_dssp CCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT
T ss_pred eeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCC
Confidence 788877777544 44 7799999 6766655443 345678888887774 5667778889888753
No 248
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.88 E-value=0.00042 Score=79.62 Aligned_cols=102 Identities=12% Similarity=0.105 Sum_probs=68.3
Q ss_pred CCcEEEEECCCCceeEEEeCCC------------------------------CCcEEEEEEccCCCeEEEEEeCCCe---
Q 006743 15 SGDLILHNLASGAKAAELKDPN------------------------------EQVLRVLDYSRNSRHLLVTAGDDGT--- 61 (633)
Q Consensus 15 DG~I~IWDl~tgk~v~~~~~~~------------------------------~~~VssLafSpdg~~lLaSGs~DGt--- 61 (633)
+|.|+.||..+|+.+-.+.... ......+.+.++.. +++.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWD 260 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCC-EEEEeCCCCCccc
Confidence 6899999999999887765210 01112467888776 6778877764
Q ss_pred ----------------EEEEECCCCCceeEEec-cCC-------CCeEEEEEcCCCC---EEEEEeCCCeEEEEeCCCCc
Q 006743 62 ----------------LHLWDTTGRSPKVSWLK-QHS-------APTAGISFSSDDK---IIASVGLDKKLYTYDPGSRR 114 (633)
Q Consensus 62 ----------------I~IWDl~t~~~~v~~l~-~H~-------~~VtsLafSPdg~---~LaSgS~DGtVrIWDlrtgk 114 (633)
|..||..+++..-+.-. .|. ..+.......+++ .++.++.+|.|+++|.++++
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 99999999884322111 121 1222222222554 78899999999999999999
Q ss_pred eee
Q 006743 115 PSS 117 (633)
Q Consensus 115 ~v~ 117 (633)
.+.
T Consensus 341 ~l~ 343 (689)
T 1yiq_A 341 LLS 343 (689)
T ss_dssp EEE
T ss_pred Eec
Confidence 874
No 249
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.88 E-value=0.0024 Score=64.85 Aligned_cols=181 Identities=10% Similarity=0.140 Sum_probs=116.0
Q ss_pred CccCCCCEEE-EEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc--eeEEe
Q 006743 1 MYNCKDEHLA-SISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP--KVSWL 77 (633)
Q Consensus 1 AFSpdG~~La-Sgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~--~v~~l 77 (633)
+|+|+++.|+ +...++.|...|.. ++.+..+.-....-...|++.+++. ++++.-.++.+.++++..... .+...
T Consensus 33 a~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~l~~~~v~~~~~i~~~~~~ 110 (255)
T 3qqz_A 33 TWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-FVISDERDYAIYVISLTPNSEVKILKKI 110 (255)
T ss_dssp EEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-EEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-EEEEECCCCcEEEEEcCCCCeeeeeeee
Confidence 4778776555 46778899999987 8888877532224466788888775 556655778999999865442 11111
Q ss_pred ------ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCC---CCceeeEee--------CCCCeEEEEEecC-CCEEEE
Q 006743 78 ------KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPG---SRRPSSCIT--------YEAPFSSLAFIDD-DWILTA 139 (633)
Q Consensus 78 ------~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlr---tgk~v~~i~--------h~~~ItsLafSPd-G~~Lat 139 (633)
...+.....|+|+|.++.|+++.+.....+|.+. ....+.... .-..+.+++++|. +++++.
T Consensus 111 ~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliL 190 (255)
T 3qqz_A 111 KIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVL 190 (255)
T ss_dssp ECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEE
T ss_pred ccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEE
Confidence 1234557999999988777777665544444432 111122221 2345789999995 566667
Q ss_pred EEcCCeEEEEECCCCCCceEEEeecC-C------CCCeeEEEEccCCCeEEEe
Q 006743 140 GTSNGRVVFYDIRGKPQPLTVLRACS-S------SEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 140 Gs~DGsV~IWDlrs~~k~v~~l~~~~-H------~~~VtsLafsPdg~~Las~ 185 (633)
....+.|.++|.... ++..+.... . -..-..|+|+++|+..+++
T Consensus 191 S~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 191 SHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp ETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred ECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 777888999998754 444444321 1 1256889999987655543
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.87 E-value=0.00041 Score=70.84 Aligned_cols=128 Identities=13% Similarity=0.139 Sum_probs=85.6
Q ss_pred eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC--eEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEe-CCCe
Q 006743 28 KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVG-LDKK 104 (633)
Q Consensus 28 ~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DG--tI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS-~DGt 104 (633)
.+.++......-...+.|+ ++ .++.+.+.+| .|+++|+.+++.. ..+.- ..........++++.|+... .++.
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~-~~~~l-~~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTL-QQIEL-GKRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEE-EEEEC-CTTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEecCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEE-EEEec-CCccceeEEEEeCCEEEEEEeeCCE
Confidence 4556653334556788998 55 4777777776 8999999998843 33322 23333322333345555554 5889
Q ss_pred EEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEe
Q 006743 105 LYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLR 162 (633)
Q Consensus 105 VrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~ 162 (633)
+.+||..+.+.+..+.....-..++ +|++.|+....++.|+++|..+.+ ....+.
T Consensus 109 v~v~D~~t~~~~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~-v~~~I~ 163 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLT-PVRTIT 163 (262)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCS-EEEEEE
T ss_pred EEEEECccCcEEEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCe-EEEEEE
Confidence 9999999999999887654334444 567888877778899999999873 344443
No 251
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.85 E-value=0.012 Score=60.44 Aligned_cols=173 Identities=11% Similarity=-0.038 Sum_probs=103.6
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCC---CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006743 2 YNCKDEHLASIS-LSGDLILHNLAS---GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (633)
Q Consensus 2 FSpdG~~LaSgs-~DG~I~IWDl~t---gk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l 77 (633)
|+++++.|+.+. .++.|..+++.. +.....+..........+++.+.+.+++++-...+.|.++|..+... ...+
T Consensus 37 ~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~ 115 (316)
T 1ijq_A 37 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLF 115 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEE
T ss_pred EEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCce-EEEE
Confidence 566666666554 457888888765 12222222112223456888876665677767789999999986552 2223
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeC-C-CeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCC
Q 006743 78 KQHSAPTAGISFSSDDKIIASVGL-D-KKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRG 153 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg~~LaSgS~-D-GtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs-~DGsV~IWDlrs 153 (633)
.........+++.|.+..|+.+.. . +.|..+++......... ..-.....+++++++..|..+. ..+.|..+|+..
T Consensus 116 ~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 116 RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 334457899999996555555543 3 68999988643322222 2345688999999877776655 567899999986
Q ss_pred CCCceEEEeecCCCCCeeEEEEc
Q 006743 154 KPQPLTVLRACSSSEAVSSLCWQ 176 (633)
Q Consensus 154 ~~k~v~~l~~~~H~~~VtsLafs 176 (633)
... ..............++++.
T Consensus 196 ~~~-~~~~~~~~~~~~P~giav~ 217 (316)
T 1ijq_A 196 GNR-KTILEDEKRLAHPFSLAVF 217 (316)
T ss_dssp CSC-EEEEECTTTTSSEEEEEEE
T ss_pred Cce-EEEeecCCccCCcEEEEEE
Confidence 422 2222211122345666664
No 252
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.84 E-value=0.0043 Score=62.98 Aligned_cols=175 Identities=8% Similarity=0.018 Sum_probs=101.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeC-C-CeEEEEECCCCCceeEEec
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-D-GTLHLWDTTGRSPKVSWLK 78 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~-D-GtI~IWDl~t~~~~v~~l~ 78 (633)
+|+++|+.+++-..++.|..||... +....+.. ......+++.++++ ++++... + ..|..+|..+++.....-.
T Consensus 38 a~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~--~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~~~~~ 113 (306)
T 2p4o_A 38 ASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATV--EGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTC-CEEEEEEC--SSEEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred EECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeC--CCCceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEEEEeC
Confidence 4678888666655788999999754 44433432 34677899999998 5555433 2 2577777766653211111
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-eeEe----------eCCCCeEEEEEecCCCEEEEEE-cCCeE
Q 006743 79 QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP-SSCI----------TYEAPFSSLAFIDDDWILTAGT-SNGRV 146 (633)
Q Consensus 79 ~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~-v~~i----------~h~~~ItsLafSPdG~~LatGs-~DGsV 146 (633)
........++..+++..+++-..++.|+++|...++. +... ..-.....+ ++++++|+++. ..+.|
T Consensus 114 ~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I 191 (306)
T 2p4o_A 114 PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLL 191 (306)
T ss_dssp TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEE
T ss_pred CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEE
Confidence 2223345666655555455544688999999876532 1110 111234555 78887766555 56889
Q ss_pred EEEECCCCCC--ceEEEeecCCCCCeeEEEEccCCCeEEE
Q 006743 147 VFYDIRGKPQ--PLTVLRACSSSEAVSSLCWQRAKPVFID 184 (633)
Q Consensus 147 ~IWDlrs~~k--~v~~l~~~~H~~~VtsLafsPdg~~Las 184 (633)
+.||+..... ....+.. ......++++++|++.++
T Consensus 192 ~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 192 LRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLYGA 228 (306)
T ss_dssp EEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEEEE
T ss_pred EEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEEEE
Confidence 9999875211 1122221 134566778876655444
No 253
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.81 E-value=0.0007 Score=70.23 Aligned_cols=140 Identities=10% Similarity=0.059 Sum_probs=95.1
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCc---------E-EEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE
Q 006743 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQV---------L-RVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (633)
Q Consensus 6 G~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~---------V-ssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~ 75 (633)
+..++++..+|.|..+|..+++.+..+....... + ..... .+. .++.++.++.|..+|..+++..
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~-~v~~~~~~g~l~~~d~~tG~~~-- 262 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNG-VVFALAYNGNLTALDLRSGQIM-- 262 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETT-EEEEECTTSCEEEEETTTCCEE--
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECC-EEEEEecCcEEEEEECCCCcEE--
Confidence 4567778889999999999999887765321100 0 00111 123 5778888999999999888732
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee-C-CCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 006743 76 WLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-Y-EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (633)
Q Consensus 76 ~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~-h-~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs 153 (633)
+.. .......+.. ++..++.++.++.|..+|..+++.+.... . ...+..... .+..|++++.+|.|++||.++
T Consensus 263 w~~-~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 263 WKR-ELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp EEE-CCCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTT
T ss_pred eec-cCCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCC
Confidence 222 2233445444 46788888999999999999998776553 1 222333333 257889999999999999998
Q ss_pred CC
Q 006743 154 KP 155 (633)
Q Consensus 154 ~~ 155 (633)
++
T Consensus 338 G~ 339 (376)
T 3q7m_A 338 GR 339 (376)
T ss_dssp CC
T ss_pred Cc
Confidence 74
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.79 E-value=0.0009 Score=75.21 Aligned_cols=139 Identities=12% Similarity=0.064 Sum_probs=93.6
Q ss_pred cEEEEECCCCceeEEEeCCC---------CCcEEEEEEccCCC--eEEEEEeCCCeEEEEECCCCCceeEEeccC-----
Q 006743 17 DLILHNLASGAKAAELKDPN---------EQVLRVLDYSRNSR--HLLVTAGDDGTLHLWDTTGRSPKVSWLKQH----- 80 (633)
Q Consensus 17 ~I~IWDl~tgk~v~~~~~~~---------~~~VssLafSpdg~--~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H----- 80 (633)
.|..+|..+|+.+-.++..+ ...+. +....+|+ .+++.++.+|.++++|..+++..-..-...
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 59999999999988776421 12221 22224563 367788999999999998887432221111
Q ss_pred -------CCCe--------------------------EEEEEcCCCCEEEEEe---------------------------
Q 006743 81 -------SAPT--------------------------AGISFSSDDKIIASVG--------------------------- 100 (633)
Q Consensus 81 -------~~~V--------------------------tsLafSPdg~~LaSgS--------------------------- 100 (633)
..+| ..++++|+..+|++..
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 0111 2357788777776653
Q ss_pred ----------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC
Q 006743 101 ----------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (633)
Q Consensus 101 ----------~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k 156 (633)
.++.|..||+.+++.+..+.....+....+...+..|++++.||.|+.||.++++.
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 34789999999999887776554444433444567888899999999999999853
No 255
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.77 E-value=0.003 Score=67.11 Aligned_cols=192 Identities=12% Similarity=0.158 Sum_probs=123.0
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccC----CCe--EEEEEeC---CCeEEEEECCCCCceeEE
Q 006743 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRN----SRH--LLVTAGD---DGTLHLWDTTGRSPKVSW 76 (633)
Q Consensus 6 G~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpd----g~~--lLaSGs~---DGtI~IWDl~t~~~~v~~ 76 (633)
..+++...+++-|.+||+ +|+.+..+.. ..++.|..-|. ++. ++++... +++|.+|++......+..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC---CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 445666677889999999 8999988864 34555555442 221 2334443 589999988422212444
Q ss_pred ecc------CC-CCeEEEEE--cC-CCC-EEEEEeCCCeEEEEeCC-------CCceeeEeeCCCCeEEEEEecCCCEEE
Q 006743 77 LKQ------HS-APTAGISF--SS-DDK-IIASVGLDKKLYTYDPG-------SRRPSSCITYEAPFSSLAFIDDDWILT 138 (633)
Q Consensus 77 l~~------H~-~~VtsLaf--SP-dg~-~LaSgS~DGtVrIWDlr-------tgk~v~~i~h~~~ItsLafSPdG~~La 138 (633)
+.. .. ..++.+|+ +| .+. ++++...+|.+..|++. +.+.++.+.....+..|..++....|+
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLY 195 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEE
Confidence 421 12 56788888 77 454 68888889999999883 335567777788999999999999999
Q ss_pred EEEcCCeEEEEECCCCC-CceEEEeec--CC-CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 139 AGTSNGRVVFYDIRGKP-QPLTVLRAC--SS-SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 139 tGs~DGsV~IWDlrs~~-k~v~~l~~~--~H-~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
++-++.-|..||.+-.. .....+... ++ ...+..|++.+. ....+.+++++-.++.+.+||..
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~--------~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYA--------ADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEEC--------GGGCEEEEEEEGGGTEEEEEESS
T ss_pred EecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEec--------CCCCEEEEEEcCCCCEEEEEECC
Confidence 99999778777855221 011222221 22 235777776431 01122355555568899999885
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.74 E-value=0.0033 Score=63.87 Aligned_cols=178 Identities=11% Similarity=0.071 Sum_probs=102.6
Q ss_pred CccCCCCEEEEEECC--CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe-
Q 006743 1 MYNCKDEHLASISLS--GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL- 77 (633)
Q Consensus 1 AFSpdG~~LaSgs~D--G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l- 77 (633)
++.++|+++++.... ..|..+|..+++...............++..+.+ ..+++-..++.|+++|..+....+...
T Consensus 78 a~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~ 156 (306)
T 2p4o_A 78 AFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEH 156 (306)
T ss_dssp EECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEEC
Confidence 367888865544332 2477778777765433332222333445554444 345554468999999986542112110
Q ss_pred --------ccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEeCCC-Cce--eeEeeCCCCeEEEEEecCCCEEEEEEcCCe
Q 006743 78 --------KQHSAPTAGISFSSDDKIIASV-GLDKKLYTYDPGS-RRP--SSCITYEAPFSSLAFIDDDWILTAGTSNGR 145 (633)
Q Consensus 78 --------~~H~~~VtsLafSPdg~~LaSg-S~DGtVrIWDlrt-gk~--v~~i~h~~~ItsLafSPdG~~LatGs~DGs 145 (633)
...-...+.| +++++.|+.+ ...+.|+.||+.. ++. ...+........++++++|++.++....+.
T Consensus 157 ~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~ 234 (306)
T 2p4o_A 157 PMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNS 234 (306)
T ss_dssp GGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCC
T ss_pred CccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCe
Confidence 0111245566 7777766555 4567999999874 332 122222245677899999988777777889
Q ss_pred EEEEECCCCCCceEEEeecCCCCCeeEEEEc---cCCCeEE
Q 006743 146 VVFYDIRGKPQPLTVLRACSSSEAVSSLCWQ---RAKPVFI 183 (633)
Q Consensus 146 V~IWDlrs~~k~v~~l~~~~H~~~VtsLafs---Pdg~~La 183 (633)
|.+||.... ..............++++|. |++..|+
T Consensus 235 V~~~~~~G~--~~~~~~~~~~~~~p~~~a~~g~~~d~~~Ly 273 (306)
T 2p4o_A 235 VVRIAPDRS--TTIIAQAEQGVIGSTAVAFGQTEGDCTAIY 273 (306)
T ss_dssp EEEECTTCC--EEEEECGGGTCTTEEEEEECCSTTTTTEEE
T ss_pred EEEECCCCC--EEEEeecccccCCceEEEEecccCCCCEEE
Confidence 999997632 21111211223568899998 6654443
No 257
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.74 E-value=0.0078 Score=63.87 Aligned_cols=179 Identities=9% Similarity=-0.037 Sum_probs=115.4
Q ss_pred CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcC-C
Q 006743 14 LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS-D 92 (633)
Q Consensus 14 ~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSP-d 92 (633)
....|+.+++........+. .......++|.+.+..++++-...+.|+.++..+... ...+.........+++.+ .
T Consensus 94 ~~~~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~~~~~~~p~glavd~~~ 170 (386)
T 3v65_B 94 NRIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVVSTGLESPGGLAVDWVH 170 (386)
T ss_dssp CBSCEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE-EEEECSSCSCCCCEEEETTT
T ss_pred cCccceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc-EEEEeCCCCCccEEEEEeCC
Confidence 45678888886655444333 2334667999987765777766788999999987652 233333334567889987 4
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEecCCCEEEEEE-cC-CeEEEEECCCCCCceEEEeecCCCCC
Q 006743 93 DKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT-SN-GRVVFYDIRGKPQPLTVLRACSSSEA 169 (633)
Q Consensus 93 g~~LaSgS~DGtVrIWDlrtgk~v~~i~-h~~~ItsLafSPdG~~LatGs-~D-GsV~IWDlrs~~k~v~~l~~~~H~~~ 169 (633)
++++++-...+.|.++++........+. .-.....++++|.+..|+... .+ +.|+.+++..... ..... ..-..
T Consensus 171 g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~--~~~~~ 247 (386)
T 3v65_B 171 DKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIAD--THLFW 247 (386)
T ss_dssp TEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEEC--SSCSC
T ss_pred CeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc-EEEEE--CCCCC
Confidence 5555565667789999987554333333 336689999999766666554 34 7899999876532 12222 22345
Q ss_pred eeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 170 VSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 170 VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
...|+|+|++ +.++++-...+.|..+|+.
T Consensus 248 PnGlavd~~~-----------~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 248 PNGLTIDYAG-----------RRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp EEEEEEEGGG-----------TEEEEEETTTTEEEEECTT
T ss_pred eeeEEEeCCC-----------CEEEEEECCCCEEEEEeCC
Confidence 7889999753 3444555556677777763
No 258
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.73 E-value=0.00068 Score=68.08 Aligned_cols=175 Identities=13% Similarity=0.054 Sum_probs=107.6
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCe
Q 006743 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPT 84 (633)
Q Consensus 5 dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~V 84 (633)
+|. |..++.++.|..||.. ++.+..+.. ....+.++...+++. ++.++ +.|..|| .+++. ..........+
T Consensus 147 ~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~d~~g~--l~v~t--~~l~~~d-~~g~~-~~~~~~~~~~~ 217 (330)
T 3hxj_A 147 DGT-IYVGSNDNYLYAINPD-GTEKWRFKT-NDAITSAASIGKDGT--IYFGS--DKVYAIN-PDGTE-KWNFYAGYWTV 217 (330)
T ss_dssp TSC-EEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTCC--EEEES--SSEEEEC-TTSCE-EEEECCSSCCC
T ss_pred CCE-EEEEcCCCEEEEECCC-CCEeEEEec-CCCceeeeEEcCCCE--EEEEe--CEEEEEC-CCCcE-EEEEccCCcce
Confidence 444 6668888999999988 777766654 334455566766775 44555 8899999 55442 33334445668
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEee
Q 006743 85 AGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRA 163 (633)
Q Consensus 85 tsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~-h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~ 163 (633)
.++...+++. |+.++.++.|..+|. +++.+..+. ....+.++.+.+++ .|.+++.+|.|+.+|. ++ +....+.
T Consensus 218 ~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g-~~~~~~~- 291 (330)
T 3hxj_A 218 TRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DG-TEKWNFE- 291 (330)
T ss_dssp SCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TS-CEEEEEE-
T ss_pred eceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CC-cEEEEEE-
Confidence 8888887765 556677788888885 455554443 23334445555455 5677888889999996 43 2223232
Q ss_pred cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 164 CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 164 ~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
.....+.++..++++ .+ +.++.+|.+++...
T Consensus 292 -~~~~~~~~~~~d~~g------------~l-~~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 292 -TGSWIIATPVIDENG------------TI-YFGTRNGKFYALFN 322 (330)
T ss_dssp -CSSCCCSCCEECTTC------------CE-EEECTTSCEEEEEC
T ss_pred -cCCccccceEEcCCC------------EE-EEEcCCCeEEEEec
Confidence 223445555554433 33 33445777766544
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.71 E-value=0.00076 Score=77.16 Aligned_cols=154 Identities=14% Similarity=0.208 Sum_probs=103.5
Q ss_pred ccCCCCEEEEEECCC-------------------cEEEEECCCCceeEEEeCC-CC-------CcEEEEEEccCCC--eE
Q 006743 2 YNCKDEHLASISLSG-------------------DLILHNLASGAKAAELKDP-NE-------QVLRVLDYSRNSR--HL 52 (633)
Q Consensus 2 FSpdG~~LaSgs~DG-------------------~I~IWDl~tgk~v~~~~~~-~~-------~~VssLafSpdg~--~l 52 (633)
|.++++.++.+..++ .|..+|..+|+.+-.++.. +. .......+..+++ .+
T Consensus 237 ~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~ 316 (668)
T 1kv9_A 237 YDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKV 316 (668)
T ss_dssp EETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEE
T ss_pred EcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEE
Confidence 455677888887665 3999999999998887742 21 1122122333453 36
Q ss_pred EEEEeCCCeEEEEECCCCCceeEEeccC-----------CCCe------------------------EEEEEcCCCCEEE
Q 006743 53 LVTAGDDGTLHLWDTTGRSPKVSWLKQH-----------SAPT------------------------AGISFSSDDKIIA 97 (633)
Q Consensus 53 LaSGs~DGtI~IWDl~t~~~~v~~l~~H-----------~~~V------------------------tsLafSPdg~~La 97 (633)
++.++.+|.++++|..+++.....-... ..++ ..++++|+..+++
T Consensus 317 v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~y 396 (668)
T 1kv9_A 317 LMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVY 396 (668)
T ss_dssp EEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEE
T ss_pred EEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEE
Confidence 8889999999999999887431110000 0000 1257777666655
Q ss_pred EEe------------------------------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEE
Q 006743 98 SVG------------------------------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT 141 (633)
Q Consensus 98 SgS------------------------------------~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs 141 (633)
... .+|.|+.||+.+++.+.............+...+.+|++++
T Consensus 397 v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~ 476 (668)
T 1kv9_A 397 IPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGT 476 (668)
T ss_dssp EEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC
T ss_pred EeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEEC
Confidence 421 34789999999999887766555554445556788999999
Q ss_pred cCCeEEEEECCCCC
Q 006743 142 SNGRVVFYDIRGKP 155 (633)
Q Consensus 142 ~DGsV~IWDlrs~~ 155 (633)
.||.|++||.++++
T Consensus 477 ~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 477 AAGQMHAYSADKGE 490 (668)
T ss_dssp TTSEEEEEETTTCC
T ss_pred CcccchhhhhhcCh
Confidence 99999999999884
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.67 E-value=0.0028 Score=63.97 Aligned_cols=128 Identities=18% Similarity=0.192 Sum_probs=85.9
Q ss_pred ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC--eEEEEECCCCCceeEEeccCCCCe--EEEEEcCCCCEEEEEeCC
Q 006743 27 AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSWLKQHSAPT--AGISFSSDDKIIASVGLD 102 (633)
Q Consensus 27 k~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DG--tI~IWDl~t~~~~v~~l~~H~~~V--tsLafSPdg~~LaSgS~D 102 (633)
+.+.++......-+..+.|+. + .++.+.+.+| .|+++|+.+++.. ..+.- .... ..+++. .+++++..-.+
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~-~~~~l-~~~~fgeGi~~~-~~~ly~ltw~~ 84 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRIL-QRAEV-PPPYFGAGIVAW-RDRLIQLTWRN 84 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEE-EEEEC-CTTCCEEEEEEE-TTEEEEEESSS
T ss_pred EEEEEcCCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEE-EEEeC-CCCcceeEEEEe-CCEEEEEEeeC
Confidence 345666533345677899986 3 4777777754 8999999998843 33222 2223 334443 33444445568
Q ss_pred CeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEe
Q 006743 103 KKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLR 162 (633)
Q Consensus 103 GtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~ 162 (633)
+.+.+||..+.+.+..+.....-..++ +++..|+.+..++.|+++|..+.+ ....+.
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~-~~~~I~ 141 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQ-QVGSIK 141 (243)
T ss_dssp SEEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCC-EEEEEE
T ss_pred CEEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCe-EEEEEE
Confidence 899999999999999987655545555 567778877889999999999873 344444
No 261
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.65 E-value=0.0029 Score=71.33 Aligned_cols=140 Identities=14% Similarity=0.190 Sum_probs=90.3
Q ss_pred CcEEEEECCCCceeEEEeCC-CC--------CcEEEEEEc-cCCC--eEEEEEeCCCeEEEEECCCCCceeEEeccC---
Q 006743 16 GDLILHNLASGAKAAELKDP-NE--------QVLRVLDYS-RNSR--HLLVTAGDDGTLHLWDTTGRSPKVSWLKQH--- 80 (633)
Q Consensus 16 G~I~IWDl~tgk~v~~~~~~-~~--------~~VssLafS-pdg~--~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H--- 80 (633)
+.|..+|..+|+.+-.++.. +. ..+. +... .+|+ .+++.++.+|.++++|..+++..-..-...
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 58999999999999887642 21 1221 2221 3553 378889999999999998887432211111
Q ss_pred ---------CCCe--------------------------------EEEEEcCCCCEEEEEe-------------------
Q 006743 81 ---------SAPT--------------------------------AGISFSSDDKIIASVG------------------- 100 (633)
Q Consensus 81 ---------~~~V--------------------------------tsLafSPdg~~LaSgS------------------- 100 (633)
..++ ..++++|+..++++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 0000 1346666544554432
Q ss_pred --------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC
Q 006743 101 --------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (633)
Q Consensus 101 --------------~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k 156 (633)
.+|.|+.||+.+++.+-......++..-.....+..|++|+.||.|+.||.++++.
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKE 519 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCE
Confidence 25789999999999886665443333222233577888899999999999999853
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.64 E-value=0.013 Score=61.24 Aligned_cols=178 Identities=9% Similarity=-0.033 Sum_probs=112.7
Q ss_pred CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcC-C
Q 006743 14 LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS-D 92 (633)
Q Consensus 14 ~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSP-d 92 (633)
....|+..++........+.. ......++|.+.+..++++-...+.|+.++..+... ...+.........+++.+ .
T Consensus 51 ~~~~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~~~~~~~p~glavd~~~ 127 (349)
T 3v64_C 51 NRIDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVVSTGLESPGGLAVDWVH 127 (349)
T ss_dssp CBSCEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCEEEEETTT
T ss_pred cccceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEeccCCceEEEecCCCCc-eEEEeCCCCCccEEEEecCC
Confidence 445688888765544333332 234567999987775666666788999999987653 233333334567899988 4
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEecCCCEEEEEE-cC-CeEEEEECCCCCCceEEEeecCCCCC
Q 006743 93 DKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT-SN-GRVVFYDIRGKPQPLTVLRACSSSEA 169 (633)
Q Consensus 93 g~~LaSgS~DGtVrIWDlrtgk~v~~i~-h~~~ItsLafSPdG~~LatGs-~D-GsV~IWDlrs~~k~v~~l~~~~H~~~ 169 (633)
++++++-...+.|.++++........+. .-.....++++|.+..|+... .+ +.|+.+++..... ..+. ...-..
T Consensus 128 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~--~~~~-~~~~~~ 204 (349)
T 3v64_C 128 DKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR--RIIA-DTHLFW 204 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EESC-CSSCSC
T ss_pred CeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc--EEEE-ECCCCC
Confidence 5555666667899999987654333332 345688999999666555444 44 7899999876422 2221 122345
Q ss_pred eeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 170 VSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 170 VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
...|+|++++.. ++++-...+.|..+|+
T Consensus 205 PnGla~d~~~~~-----------lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 205 PNGLTIDYAGRR-----------MYWVDAKHHVIERANL 232 (349)
T ss_dssp EEEEEEETTTTE-----------EEEEETTTTEEEEEET
T ss_pred cceEEEeCCCCE-----------EEEEECCCCEEEEEeC
Confidence 788999986443 4444444566666665
No 263
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.62 E-value=0.0065 Score=63.02 Aligned_cols=180 Identities=7% Similarity=-0.009 Sum_probs=113.3
Q ss_pred CCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcC
Q 006743 14 LSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS 91 (633)
Q Consensus 14 ~DG~I~IWDl~tgk--~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSP 91 (633)
....|+.+++.... ....+. .......|+|.+.+..++++-...+.|+.++..+.......+...-.....+++.+
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~--~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~ 88 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVG--GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 88 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEE--EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET
T ss_pred ccCeEEEEECCCCceEEEEEec--CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc
Confidence 45689999987653 112222 11234568999876657777677889999999776422222333334577899987
Q ss_pred -CCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEE--cCCeEEEEECCCCCCceEEEeecCCC
Q 006743 92 -DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT--SNGRVVFYDIRGKPQPLTVLRACSSS 167 (633)
Q Consensus 92 -dg~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs--~DGsV~IWDlrs~~k~v~~l~~~~H~ 167 (633)
.++++++-...+.|.++|+........+ ........++++|.+..|+... ..+.|+.+++..... ..... ..-
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~--~~l 165 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIIN--SEI 165 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEEC--SSC
T ss_pred CCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEEE--CCC
Confidence 5555566667789999998754433333 3445688999999766666655 357899999876422 12222 223
Q ss_pred CCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 168 EAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 168 ~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
.....|+|++++.. ++++-...+.|..+|+.
T Consensus 166 ~~Pnglavd~~~~~-----------lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 166 YWPNGLTLDYEEQK-----------LYWADAKLNFIHKSNLD 196 (318)
T ss_dssp SCEEEEEEETTTTE-----------EEEEETTTTEEEEEETT
T ss_pred CCccEEEEeccCCE-----------EEEEECCCCEEEEEcCC
Confidence 45688999986443 34444445666666653
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.57 E-value=0.03 Score=59.77 Aligned_cols=184 Identities=7% Similarity=-0.050 Sum_probs=117.7
Q ss_pred EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC---ceeEEeccCCCCe
Q 006743 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---PKVSWLKQHSAPT 84 (633)
Q Consensus 8 ~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~---~~v~~l~~H~~~V 84 (633)
+|+.+ ....|+..++........+. ....+..|+|.+.+..++++-...+.|+.+++.+.. .....+.......
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEe-ccceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 44444 45788999987665444443 334566799998777566666678899999987621 1233344345678
Q ss_pred EEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEecCCCEEEEEEc--CCeEEEEECCCCCCceEE
Q 006743 85 AGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTS--NGRVVFYDIRGKPQPLTV 160 (633)
Q Consensus 85 tsLafSP-dg~~LaSgS~DGtVrIWDlrtgk~v~~i~-h~~~ItsLafSPdG~~LatGs~--DGsV~IWDlrs~~k~v~~ 160 (633)
..+++.+ .++++++-...+.|.+.|+........+. .......|+++|.+.+|+.... .+.|+..++..... ...
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-~~~ 240 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSL 240 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-EEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-EEE
Confidence 8999998 55555666677899999998665544443 4456899999997666665543 47899999886532 222
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 161 l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
+. ..-.....|++++++.. ++++-...+.|..+|+
T Consensus 241 ~~--~~l~~P~glavd~~~~~-----------lY~aD~~~~~I~~~d~ 275 (400)
T 3p5b_L 241 VT--ENIQWPNGITLDLLSGR-----------LYWVDSKLHSISSIDV 275 (400)
T ss_dssp EC--SSCSCEEEEEEETTTTE-----------EEEEETTTTEEEEEET
T ss_pred EE--CCCCceEEEEEEeCCCE-----------EEEEECCCCEEEEEeC
Confidence 22 23356789999986443 4444444556666665
No 265
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.52 E-value=0.0016 Score=75.27 Aligned_cols=135 Identities=11% Similarity=0.075 Sum_probs=87.3
Q ss_pred cEEEEEEc-cCCCeEEEEEeCCC----eEEEEECCCC-CceeEEeccCCCCeEEEEEcCCCCEEEEEeCC-----CeEEE
Q 006743 39 VLRVLDYS-RNSRHLLVTAGDDG----TLHLWDTTGR-SPKVSWLKQHSAPTAGISFSSDDKIIASVGLD-----KKLYT 107 (633)
Q Consensus 39 ~VssLafS-pdg~~lLaSGs~DG----tI~IWDl~t~-~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~D-----GtVrI 107 (633)
.+...+|+ |||+.++++...+| .|+++|+.++ +.....+. .....++|+||++.|+....| ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 56778999 99985555555444 4999999887 52111111 113468899999988887765 36889
Q ss_pred EeCCCCcee--eEe--eCCCCeEEEEEecCCCEEEEEEc---CCeEEEEECCCCCCce--EEEeecCCCCCeeEEEEcc
Q 006743 108 YDPGSRRPS--SCI--TYEAPFSSLAFIDDDWILTAGTS---NGRVVFYDIRGKPQPL--TVLRACSSSEAVSSLCWQR 177 (633)
Q Consensus 108 WDlrtgk~v--~~i--~h~~~ItsLafSPdG~~LatGs~---DGsV~IWDlrs~~k~v--~~l~~~~H~~~VtsLafsP 177 (633)
+++.+++.. .++ ........+.|+|||++|+.... ...|+++|+.+..... ..+. ....+...++.|+.
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVR-PREKGVRYDVQMHG 329 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESS-CCCTTCCEEEEEET
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEee-cCCCCceEEEeeee
Confidence 999876532 232 23345678899999999887663 3468999998753222 2222 13345556666544
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.52 E-value=0.033 Score=58.18 Aligned_cols=169 Identities=8% Similarity=-0.050 Sum_probs=104.2
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 2 FSpdG~~LaSgs-~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
|++.++.|+... ..+.|..+++........+.. .......+++.+.+.+++++-...+.|.+.++.+... ...+...
T Consensus 80 ~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~ 157 (349)
T 3v64_C 80 FHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQS 157 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTT
T ss_pred EeccccEEEEEeccCCceEEEecCCCCceEEEeC-CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCC
Confidence 555555555444 456777777765443332322 2223356888876666777777788999999987653 2233334
Q ss_pred CCCeEEEEEcCCCCE-EEEEeCC-CeEEEEeCCCCceeeEee-CCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCCCC
Q 006743 81 SAPTAGISFSSDDKI-IASVGLD-KKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQ 156 (633)
Q Consensus 81 ~~~VtsLafSPdg~~-LaSgS~D-GtVrIWDlrtgk~v~~i~-h~~~ItsLafSPdG~~LatGs-~DGsV~IWDlrs~~k 156 (633)
-.....+++.|.+.. +++-..+ +.|..+|+.......... .-.....++++|++..|..+. ..+.|..+|+.....
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~ 237 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR 237 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce
Confidence 456799999995554 4444444 789999987543333322 345678999998777666554 467899999876432
Q ss_pred ceEEEeecCCCCCeeEEEE
Q 006743 157 PLTVLRACSSSEAVSSLCW 175 (633)
Q Consensus 157 ~v~~l~~~~H~~~VtsLaf 175 (633)
...+. .......++++
T Consensus 238 -~~~~~--~~~~~P~giav 253 (349)
T 3v64_C 238 -KAVIS--QGLPHPFAITV 253 (349)
T ss_dssp -EEEEC--SSCSSEEEEEE
T ss_pred -EEEEe--CCCCCceEEEE
Confidence 22222 22344566666
No 267
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.52 E-value=0.011 Score=62.38 Aligned_cols=152 Identities=13% Similarity=0.155 Sum_probs=104.0
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEE-EeC----CC-CCcEEEEEE---ccCCCeEEEEEe-------------C
Q 006743 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAE-LKD----PN-EQVLRVLDY---SRNSRHLLVTAG-------------D 58 (633)
Q Consensus 2 FSpdG~~LaSgs-~DG~I~IWDl~tgk~v~~-~~~----~~-~~~VssLaf---Spdg~~lLaSGs-------------~ 58 (633)
|++.+..|..++ ..|.|..||...+..... +.+ .. ...+..|.| .++++ ++++.. .
T Consensus 20 wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~~~g~~~~g 98 (334)
T 2p9w_A 20 YDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFNFADQSSHG 98 (334)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTTCTTSCCSSS
T ss_pred CcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCc-EEEEEcccccccccccccCC
Confidence 666666677676 689999999875544333 221 01 124578999 57765 565443 2
Q ss_pred CCeEEEEECC---CCCceeE-EeccC-----------CCCeEEEEEcCCCCEEEEEeCC-CeEEEEeCCCCceeeEe-e-
Q 006743 59 DGTLHLWDTT---GRSPKVS-WLKQH-----------SAPTAGISFSSDDKIIASVGLD-KKLYTYDPGSRRPSSCI-T- 120 (633)
Q Consensus 59 DGtI~IWDl~---t~~~~v~-~l~~H-----------~~~VtsLafSPdg~~LaSgS~D-GtVrIWDlrtgk~v~~i-~- 120 (633)
+..|..||+. +++.... .+... ....++++..++|+..++++.. +.|..+|.......... .
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~ 178 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES 178 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC
Confidence 6889999998 5553222 22111 1247899999999999999988 88888887754332222 1
Q ss_pred ----CCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 006743 121 ----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (633)
Q Consensus 121 ----h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~ 154 (633)
.....+.|+++|+|+.|++....|.|..+|++..
T Consensus 179 ~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 179 GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 1233679999999999998877999999999853
No 268
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.47 E-value=0.073 Score=56.70 Aligned_cols=172 Identities=12% Similarity=-0.033 Sum_probs=104.4
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCc---eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006743 2 YNCKDEHLASIS-LSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (633)
Q Consensus 2 FSpdG~~LaSgs-~DG~I~IWDl~tgk---~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l 77 (633)
|++.++.|+... ..+.|+.+++.... ....+..........|++.+.+++++++-...+.|.+.++.+... ...+
T Consensus 119 ~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~-~~l~ 197 (400)
T 3p5b_L 119 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLF 197 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE-EEEE
T ss_pred eeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce-EEEE
Confidence 555555555554 34667777765421 122222223344567888886666777777788999999987663 2233
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEe-C-CCeEEEEeCCCCceeeEee-CCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCC
Q 006743 78 KQHSAPTAGISFSSDDKIIASVG-L-DKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRG 153 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg~~LaSgS-~-DGtVrIWDlrtgk~v~~i~-h~~~ItsLafSPdG~~LatGs-~DGsV~IWDlrs 153 (633)
.........|++.|.+.+|+... . .+.|...++........+. .-.....|++++++..|..+. ..+.|..+|+..
T Consensus 198 ~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 198 RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 33445689999999655555554 2 3689999987544433332 336789999999877777665 467899999976
Q ss_pred CCCceEEEeecCCCCCeeEEEE
Q 006743 154 KPQPLTVLRACSSSEAVSSLCW 175 (633)
Q Consensus 154 ~~k~v~~l~~~~H~~~VtsLaf 175 (633)
... ..+......-....++++
T Consensus 278 ~~~-~~~~~~~~~l~~P~gl~v 298 (400)
T 3p5b_L 278 GNR-KTILEDEKRLAHPFSLAV 298 (400)
T ss_dssp CCC-EEEEECSSTTSSEEEEEE
T ss_pred Ccc-EEEEeCCCCCCCCEEEEE
Confidence 532 222322122234456665
No 269
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.45 E-value=0.0013 Score=74.70 Aligned_cols=149 Identities=16% Similarity=0.118 Sum_probs=88.1
Q ss_pred cC-CCCEEEEEECCC-----------cEEEEECCCCce--eEEEeCCCCCcEEEEEEccCCCeEEEEEe-CCCeEEEEEC
Q 006743 3 NC-KDEHLASISLSG-----------DLILHNLASGAK--AAELKDPNEQVLRVLDYSRNSRHLLVTAG-DDGTLHLWDT 67 (633)
Q Consensus 3 Sp-dG~~LaSgs~DG-----------~I~IWDl~tgk~--v~~~~~~~~~~VssLafSpdg~~lLaSGs-~DGtI~IWDl 67 (633)
.+ +|+.++.|+.++ .+.+||..+++. +..+...+......+++..++. +++.|+ .+..+.+||.
T Consensus 194 ~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~-lyv~GG~~~~~v~~yd~ 272 (656)
T 1k3i_A 194 EPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGNDAKKTSLYDS 272 (656)
T ss_dssp ETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSC-EEEECSSSTTCEEEEEG
T ss_pred EecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCC-EEEeCCCCCCceEEecC
Confidence 44 778888887543 588999987753 3333322333333466777887 788877 4568999999
Q ss_pred CCCCceeEEec-cC-CCCeEEEEEcCCCCEEEEEe-CC-----CeEEEEeCCCCceeeEe-----eCCCCeEEEEEecCC
Q 006743 68 TGRSPKVSWLK-QH-SAPTAGISFSSDDKIIASVG-LD-----KKLYTYDPGSRRPSSCI-----TYEAPFSSLAFIDDD 134 (633)
Q Consensus 68 ~t~~~~v~~l~-~H-~~~VtsLafSPdg~~LaSgS-~D-----GtVrIWDlrtgk~v~~i-----~h~~~ItsLafSPdG 134 (633)
.+.... .+. .+ ...-.++++.+++++++.|+ .+ ..+.+||..+++-...- .....-....+..++
T Consensus 273 ~t~~W~--~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~ 350 (656)
T 1k3i_A 273 SSDSWI--PGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDN 350 (656)
T ss_dssp GGTEEE--ECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTC
T ss_pred cCCcee--ECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCC
Confidence 766521 111 11 12223456667899999998 44 47999999887644321 000000001222455
Q ss_pred CEEEEEEcCC---------eEEEEECCCC
Q 006743 135 WILTAGTSNG---------RVVFYDIRGK 154 (633)
Q Consensus 135 ~~LatGs~DG---------sV~IWDlrs~ 154 (633)
+.++.|+.+| .|..||..+.
T Consensus 351 ~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~ 379 (656)
T 1k3i_A 351 HAWLFGWKKGSVFQAGPSTAMNWYYTSGS 379 (656)
T ss_dssp SCCEEECGGGCEEECCSSSEEEEEECSTT
T ss_pred ceEEEECCCCcEEEecCccceeeeecCCc
Confidence 5666665554 4678888765
No 270
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.43 E-value=0.0075 Score=68.33 Aligned_cols=152 Identities=9% Similarity=-0.015 Sum_probs=98.7
Q ss_pred CCCCEEEEEECC----------------CcEEEEECCCCceeEEEeCCCC---------CcEEEEEEc-cCCC--eEEEE
Q 006743 4 CKDEHLASISLS----------------GDLILHNLASGAKAAELKDPNE---------QVLRVLDYS-RNSR--HLLVT 55 (633)
Q Consensus 4 pdG~~LaSgs~D----------------G~I~IWDl~tgk~v~~~~~~~~---------~~VssLafS-pdg~--~lLaS 55 (633)
++..+++.+..+ +.|..+|..+|+.+-.++..+. ..+. +... .+|+ .+++.
T Consensus 250 ~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~ 328 (599)
T 1w6s_A 250 PGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTH 328 (599)
T ss_dssp TTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEE
T ss_pred CCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEE
Confidence 456677777655 3799999999999888775332 1121 2222 3553 36788
Q ss_pred EeCCCeEEEEECCCCCceeEEecc------------CCCCe--------------------------EEEEEcCCCCEEE
Q 006743 56 AGDDGTLHLWDTTGRSPKVSWLKQ------------HSAPT--------------------------AGISFSSDDKIIA 97 (633)
Q Consensus 56 Gs~DGtI~IWDl~t~~~~v~~l~~------------H~~~V--------------------------tsLafSPdg~~La 97 (633)
++.+|.++++|.++++.....-.. ...+| ..++++|+..+++
T Consensus 329 ~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~y 408 (599)
T 1w6s_A 329 PDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFF 408 (599)
T ss_dssp ECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEE
T ss_pred ECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEE
Confidence 899999999999888743222111 11111 1356666655554
Q ss_pred EEe---------------------------------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEE
Q 006743 98 SVG---------------------------------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (633)
Q Consensus 98 SgS---------------------------------------~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~La 138 (633)
+.. .+|.|..||+.+++.+-......+...-.+...+..|+
T Consensus 409 v~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf 488 (599)
T 1w6s_A 409 MGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVF 488 (599)
T ss_dssp EEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEE
T ss_pred EeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEE
Confidence 421 34789999999999877665443332222233577888
Q ss_pred EEEcCCeEEEEECCCCCC
Q 006743 139 AGTSNGRVVFYDIRGKPQ 156 (633)
Q Consensus 139 tGs~DGsV~IWDlrs~~k 156 (633)
.++.||.|+.||.++++.
T Consensus 489 ~gt~dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 489 YGTLDGYLKARDSDTGDL 506 (599)
T ss_dssp EECTTSEEEEEETTTCCE
T ss_pred EECCCCeEEEEECCCCCE
Confidence 899999999999999854
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.43 E-value=0.028 Score=59.54 Aligned_cols=188 Identities=9% Similarity=-0.032 Sum_probs=113.4
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 2 FSpdG~~LaSgs-~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
|++.++.|+... ..+.|..+++........+.. .......+++.+.+.+++++-...+.|.+.++.+... ...+...
T Consensus 123 ~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-~~l~~~~ 200 (386)
T 3v65_B 123 FHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQS 200 (386)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCCEEEEECS-SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-EEEECSS
T ss_pred EecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC-CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-EEeecCC
Confidence 555555555444 456788888765543333322 2223345788876666777777788999999876653 2233334
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCCCC
Q 006743 81 SAPTAGISFSSDDKIIASVG-LD-KKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQ 156 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS-~D-GtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs-~DGsV~IWDlrs~~k 156 (633)
......+++.|.+..|+... .+ +.|..+|+......... ..-.....|+|+|++..|..+. ..+.|..+|+.....
T Consensus 201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 280 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR 280 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC
T ss_pred CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee
Confidence 46689999999655555444 44 68999998754433333 2344678999998776666554 567899999876432
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccC
Q 006743 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (633)
Q Consensus 157 ~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWD 207 (633)
...+. .......+|++. ++.++++....+.|..+|
T Consensus 281 -~~~~~--~~~~~P~giav~-------------~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 281 -KAVIS--QGLPHPFAITVF-------------EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp -EEEEC--SSCSSEEEEEEE-------------TTEEEEEETTTTEEEEEE
T ss_pred -EEEEE--CCCCCceEEEEE-------------CCEEEEeeCCCCeEEEEE
Confidence 22222 223445666662 234445544455555554
No 272
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.39 E-value=0.0019 Score=73.22 Aligned_cols=181 Identities=10% Similarity=0.041 Sum_probs=101.4
Q ss_pred cCCCCEEEEEEC-CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEe-CC-----CeEEEEECCCCCceeE
Q 006743 3 NCKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG-DD-----GTLHLWDTTGRSPKVS 75 (633)
Q Consensus 3 SpdG~~LaSgs~-DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs-~D-----GtI~IWDl~t~~~~v~ 75 (633)
..+|+.++.|+. ++.+.+||..+++-...-..+....-.+++..++++ +++.|+ .+ ..+.+||..+......
T Consensus 251 ~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 251 DGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp CTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred CCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 467888888884 568999998776533221111122222345666777 777777 44 5689999876542110
Q ss_pred -------Eecc-------CCC-------------------------------------------------CeEEEEEcC-
Q 006743 76 -------WLKQ-------HSA-------------------------------------------------PTAGISFSS- 91 (633)
Q Consensus 76 -------~l~~-------H~~-------------------------------------------------~VtsLafSP- 91 (633)
.... +.. .-.++.|..
T Consensus 330 ~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~ 409 (656)
T 1k3i_A 330 PNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAV 409 (656)
T ss_dssp TTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETT
T ss_pred CCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCC
Confidence 0000 000 112233333
Q ss_pred CCCEEEEEeCCC-----------eEEEEeCCCCceeeEe----eCCCCeEEEEEecCCCEEEEEEcC-----------Ce
Q 006743 92 DDKIIASVGLDK-----------KLYTYDPGSRRPSSCI----TYEAPFSSLAFIDDDWILTAGTSN-----------GR 145 (633)
Q Consensus 92 dg~~LaSgS~DG-----------tVrIWDlrtgk~v~~i----~h~~~ItsLafSPdG~~LatGs~D-----------Gs 145 (633)
++++++.|+.++ .|.+||..+....... .......+++..|++++++.|+.+ ..
T Consensus 410 ~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~ 489 (656)
T 1k3i_A 410 KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFT 489 (656)
T ss_dssp TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCC
T ss_pred CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccc
Confidence 677777877542 6888898876654432 122223455677899999999864 46
Q ss_pred EEEEECCCCCCceEEEeecCC-CCCeeEEEEccCCCeEEEec
Q 006743 146 VVFYDIRGKPQPLTVLRACSS-SEAVSSLCWQRAKPVFIDET 186 (633)
Q Consensus 146 V~IWDlrs~~k~v~~l~~~~H-~~~VtsLafsPdg~~Las~s 186 (633)
+.+||..+.. ...+....+ .....+..+.++++.++.++
T Consensus 490 v~~ydp~t~~--W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 490 PEIYVPEQDT--FYKQNPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp CEEEEGGGTE--EEECCCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred eEEEcCCCCc--eeecCCCCCccccccHhhcCCCcEEEecCC
Confidence 8999997652 122221111 12223344567766666653
No 273
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.36 E-value=0.0052 Score=66.39 Aligned_cols=149 Identities=8% Similarity=0.070 Sum_probs=95.1
Q ss_pred ccC-CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC----eEEEEECCCCCceeEE
Q 006743 2 YNC-KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG----TLHLWDTTGRSPKVSW 76 (633)
Q Consensus 2 FSp-dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DG----tI~IWDl~t~~~~v~~ 76 (633)
|+| ++..|+++...+.|+.+|+..+....... .......|+|+++++.++++...++ .+.+++..........
T Consensus 144 vdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~ 221 (430)
T 3tc9_A 144 FDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITE 221 (430)
T ss_dssp EETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEE
T ss_pred ECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeee
Confidence 556 35566666655889999987655443333 3445677999999984444443222 3444554332211122
Q ss_pred eccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeEee--CCCCeEEEEEecCCCEEEEE-EcCCeEEEEECC
Q 006743 77 LKQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAG-TSNGRVVFYDIR 152 (633)
Q Consensus 77 l~~H~~~VtsLafSP-dg~~LaSgS~DGtVrIWDlrtgk~v~~i~--h~~~ItsLafSPdG~~LatG-s~DGsV~IWDlr 152 (633)
+.. .....+++++| ++.++++-..++.|+.||...+....... .......++|+|+|++|+.+ ...+.|+.++..
T Consensus 222 l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 222 LTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 222 23467889999 77777776678899999998766433332 33457899999999965555 457889998876
Q ss_pred C
Q 006743 153 G 153 (633)
Q Consensus 153 s 153 (633)
.
T Consensus 301 ~ 301 (430)
T 3tc9_A 301 W 301 (430)
T ss_dssp T
T ss_pred c
Confidence 4
No 274
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.35 E-value=0.02 Score=57.98 Aligned_cols=142 Identities=15% Similarity=0.197 Sum_probs=93.1
Q ss_pred CcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe-ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-
Q 006743 38 QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL-KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP- 115 (633)
Q Consensus 38 ~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l-~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~- 115 (633)
..+..++|+|++..++++...++.|...|.. ++. ...+ .........|++.+++.++++.-.++.+.++++.....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v-~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDL-IRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCE-EEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCE-EEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 4689999999877677778889999999998 442 3333 23335688999998887767766778899998765432
Q ss_pred --eeEee-------CCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC--CCCceEEEee-----cCCCCCeeEEEEccCC
Q 006743 116 --SSCIT-------YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG--KPQPLTVLRA-----CSSSEAVSSLCWQRAK 179 (633)
Q Consensus 116 --v~~i~-------h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs--~~k~v~~l~~-----~~H~~~VtsLafsPdg 179 (633)
+.... .......++|+|.++.|+++.+.....||.++. ....+..+.. ..+...+.+++++|..
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK 184 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence 12221 234468999999998887777655545554432 1112333321 1234457899999964
Q ss_pred Ce
Q 006743 180 PV 181 (633)
Q Consensus 180 ~~ 181 (633)
..
T Consensus 185 g~ 186 (255)
T 3qqz_A 185 NT 186 (255)
T ss_dssp TE
T ss_pred Ce
Confidence 33
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.33 E-value=0.012 Score=63.57 Aligned_cols=148 Identities=9% Similarity=0.043 Sum_probs=92.0
Q ss_pred ccCC--CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCC---Ce-EEEEECCCCCceeE
Q 006743 2 YNCK--DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD---GT-LHLWDTTGRSPKVS 75 (633)
Q Consensus 2 FSpd--G~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~D---Gt-I~IWDl~t~~~~v~ 75 (633)
|+++ +..|+.+...+.|+.+|..+++...... .......|+|+++++ ++++.... .. +..++.........
T Consensus 146 vd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~--~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~ 222 (433)
T 4hw6_A 146 FDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT--NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERL 222 (433)
T ss_dssp ECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC--CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEE
T ss_pred EccccCCCEEEEEeCCCCEEEEECCCCEEEEeec--CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccc
Confidence 5563 4556666555889999987776554332 344567899999998 55554321 22 33333322221111
Q ss_pred EeccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCcee-eEee--CCCCeEEEEEecCCCEEEEEE-cCCeEEEEE
Q 006743 76 WLKQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPS-SCIT--YEAPFSSLAFIDDDWILTAGT-SNGRVVFYD 150 (633)
Q Consensus 76 ~l~~H~~~VtsLafSP-dg~~LaSgS~DGtVrIWDlrtgk~v-~~i~--h~~~ItsLafSPdG~~LatGs-~DGsV~IWD 150 (633)
.+. .......++++| ++.++++-..++.|+.+|..++... .... .......++|+|++++|+.+. ..+.|+.+|
T Consensus 223 ~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~ 301 (433)
T 4hw6_A 223 SLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVD 301 (433)
T ss_dssp EEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEe
Confidence 121 234457789999 7776666667789999999877662 2222 223345799999999666554 568899988
Q ss_pred CCC
Q 006743 151 IRG 153 (633)
Q Consensus 151 lrs 153 (633)
...
T Consensus 302 ~d~ 304 (433)
T 4hw6_A 302 YNR 304 (433)
T ss_dssp BCT
T ss_pred CCC
Confidence 763
No 276
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.31 E-value=0.0093 Score=68.13 Aligned_cols=148 Identities=16% Similarity=0.049 Sum_probs=94.9
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCc----------EEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE
Q 006743 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQV----------LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (633)
Q Consensus 6 G~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~----------VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~ 75 (633)
+..|++++.++.|+.+|..+|+.+-++....... ...+.+. +. .++.++.|+.|+.+|..+++..-.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GD-KVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BT-EEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--CC-EEEEEcCCCEEEEEECCCCCEeee
Confidence 5677888889999999999999988775422110 0112222 33 578888999999999998884322
Q ss_pred EeccCCCCeEEEEEcC--CCCEEEEEeC------CCeEEEEeCCCCceeeEeeCC--C----------------------
Q 006743 76 WLKQHSAPTAGISFSS--DDKIIASVGL------DKKLYTYDPGSRRPSSCITYE--A---------------------- 123 (633)
Q Consensus 76 ~l~~H~~~VtsLafSP--dg~~LaSgS~------DGtVrIWDlrtgk~v~~i~h~--~---------------------- 123 (633)
.-.........+.-.| .+..++++.. ++.|+.||.++++.+..+... .
T Consensus 143 ~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~ 222 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (668)
T ss_dssp EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred eccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccce
Confidence 2111110001111112 2345555543 589999999999987665311 0
Q ss_pred --------CeEEEEEecCCCEEEEEEcCCe-------------------EEEEECCCCCC
Q 006743 124 --------PFSSLAFIDDDWILTAGTSNGR-------------------VVFYDIRGKPQ 156 (633)
Q Consensus 124 --------~ItsLafSPdG~~LatGs~DGs-------------------V~IWDlrs~~k 156 (633)
....++++|+...|+.+..++. |+.+|.++++.
T Consensus 223 w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~ 282 (668)
T 1kv9_A 223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKL 282 (668)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE
T ss_pred eeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCce
Confidence 1124688888889988887764 99999999853
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.30 E-value=0.059 Score=55.72 Aligned_cols=189 Identities=9% Similarity=-0.040 Sum_probs=109.6
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCcee-EEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 2 YNCKDEHLASIS-LSGDLILHNLASGAKA-AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 2 FSpdG~~LaSgs-~DG~I~IWDl~tgk~v-~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
|++.++.|+... ..+.|..+++..+... ..+.. .......+++.+.+.+++++-...+.|.++++.+.... .....
T Consensus 42 ~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~-~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-~l~~~ 119 (318)
T 3sov_A 42 FVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VLFWQ 119 (318)
T ss_dssp EEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE-CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECS
T ss_pred EEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC-CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE-EEEeC
Confidence 444444444333 3456666666544211 11111 11223457888766657777677889999999876532 22334
Q ss_pred CCCCeEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCCC
Q 006743 80 HSAPTAGISFSSDDKIIASVG--LDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKP 155 (633)
Q Consensus 80 H~~~VtsLafSPdg~~LaSgS--~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs-~DGsV~IWDlrs~~ 155 (633)
.......+++.|.+..|+.+. ..+.|..+++......... ..-.....+++++++..|..+. ..+.|..+|+....
T Consensus 120 ~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~ 199 (318)
T 3sov_A 120 ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 199 (318)
T ss_dssp SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc
Confidence 446679999999655555555 3578999998643332232 2335678999999777666554 56889999997643
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 156 k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
. +.+.. .......++++.. +.++++....+.|..+|.
T Consensus 200 ~--~~~~~-~~~~~P~glav~~-------------~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 200 R--QAVVK-GSLPHPFALTLFE-------------DILYWTDWSTHSILACNK 236 (318)
T ss_dssp C--EEEEC-SCCSCEEEEEEET-------------TEEEEEETTTTEEEEEET
T ss_pred e--EEEec-CCCCCceEEEEeC-------------CEEEEEecCCCeEEEEEC
Confidence 2 22221 2334455666542 344444444555555554
No 278
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.18 E-value=0.014 Score=65.35 Aligned_cols=113 Identities=12% Similarity=0.083 Sum_probs=69.4
Q ss_pred CCEEEEEEC------CCcEEEEECCCCceeEEEeCCCCC-------------------------------------cEEE
Q 006743 6 DEHLASISL------SGDLILHNLASGAKAAELKDPNEQ-------------------------------------VLRV 42 (633)
Q Consensus 6 G~~LaSgs~------DG~I~IWDl~tgk~v~~~~~~~~~-------------------------------------~Vss 42 (633)
+..+++++. +|.|+.+|..+|+.+-.+...... ....
T Consensus 160 ~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~ 239 (571)
T 2ad6_A 160 KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGW 239 (571)
T ss_dssp TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSC
T ss_pred CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeee
Confidence 345666654 789999999999988776532110 0012
Q ss_pred EEEccCCCeEEEEEeCC----------------CeEEEEECCCCCceeEE-eccCC--------CCeEEEEEcCCCC---
Q 006743 43 LDYSRNSRHLLVTAGDD----------------GTLHLWDTTGRSPKVSW-LKQHS--------APTAGISFSSDDK--- 94 (633)
Q Consensus 43 LafSpdg~~lLaSGs~D----------------GtI~IWDl~t~~~~v~~-l~~H~--------~~VtsLafSPdg~--- 94 (633)
+++.++.. +++.+..+ +.|..+|..+++..-+. ...|. .++. +....+++
T Consensus 240 ~a~d~~~g-~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~ 317 (571)
T 2ad6_A 240 YAYDPKLN-LFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTP 317 (571)
T ss_dssp CEEETTTT-EEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEE
T ss_pred EEEcCCCC-eEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEE
Confidence 45566555 45554422 36999999988743221 11221 2221 22223664
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeEee
Q 006743 95 IIASVGLDKKLYTYDPGSRRPSSCIT 120 (633)
Q Consensus 95 ~LaSgS~DGtVrIWDlrtgk~v~~i~ 120 (633)
.++.++.+|.|+++|.++++.+....
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeec
Confidence 57788999999999999998876553
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.17 E-value=0.083 Score=61.77 Aligned_cols=180 Identities=7% Similarity=-0.047 Sum_probs=112.2
Q ss_pred ECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC---ceeEEeccCCCCeEEEEE
Q 006743 13 SLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---PKVSWLKQHSAPTAGISF 89 (633)
Q Consensus 13 s~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~---~~v~~l~~H~~~VtsLaf 89 (633)
.....|+..++........+. ....+..|+|.+.+..++++-...+.|+.+++.+.. .....+.........|++
T Consensus 401 an~~~Ir~i~l~~~~~~~l~~--~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv 478 (791)
T 3m0c_C 401 TNRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 478 (791)
T ss_dssp ECBSSEEEECTTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred ccccceeEeeccCCcceeeec--CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeee
Confidence 345568888876555444333 234456799998766577777778899999997532 113334434566788999
Q ss_pred cCCC-CEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEecCCCEEEEEEc-C-CeEEEEECCCCCCceEEEeecC
Q 006743 90 SSDD-KIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTS-N-GRVVFYDIRGKPQPLTVLRACS 165 (633)
Q Consensus 90 SPdg-~~LaSgS~DGtVrIWDlrtgk~v~~i~-h~~~ItsLafSPdG~~LatGs~-D-GsV~IWDlrs~~k~v~~l~~~~ 165 (633)
.+.+ +++++-...+.|.+.|+.......++. .......|+++|.+.+|+.... + +.|.+.++..... ..++. .
T Consensus 479 D~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~--~ 555 (791)
T 3m0c_C 479 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVT--E 555 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEEC--S
T ss_pred eecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEe--C
Confidence 9855 455555567899999998655444443 4456899999998666665553 3 7899999876532 22222 2
Q ss_pred CCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 166 SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 166 H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
.-.....|++++.+.. ++++-...+.|...|+
T Consensus 556 ~l~~P~GLavD~~~~~-----------LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGR-----------LYWVDSKLHSISSIDV 587 (791)
T ss_dssp SCSCEEEEEEETTTTE-----------EEEEETTTTEEEEEET
T ss_pred CCCCceEEEEecCCCe-----------EEEEeCCCCcEEEEec
Confidence 3357888999875443 3344344455555554
No 280
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.15 E-value=0.017 Score=60.83 Aligned_cols=156 Identities=12% Similarity=0.106 Sum_probs=102.7
Q ss_pred EEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc----CC--CCeEEEEE---cCCCCEEEEEe-----------
Q 006743 41 RVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ----HS--APTAGISF---SSDDKIIASVG----------- 100 (633)
Q Consensus 41 ssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~----H~--~~VtsLaf---SPdg~~LaSgS----------- 100 (633)
.+++|.+....++++.-..+.|..||..++......+.. .. ..+.+|.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 357898866645555557999999999755422222221 11 13589999 68877777544
Q ss_pred --CCCeEEEEeCC---CCceeeEeeC--------------CCCeEEEEEecCCCEEEEEEcC-CeEEEEECCCCCCceEE
Q 006743 101 --LDKKLYTYDPG---SRRPSSCITY--------------EAPFSSLAFIDDDWILTAGTSN-GRVVFYDIRGKPQPLTV 160 (633)
Q Consensus 101 --~DGtVrIWDlr---tgk~v~~i~h--------------~~~ItsLafSPdG~~LatGs~D-GsV~IWDlrs~~k~v~~ 160 (633)
.+..|..||+. +++.+..... ...+..++..++|+..++++.. +.|..++..... ....
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~~ 174 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT-VSTF 174 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-EEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-Eeee
Confidence 26789999999 7877655531 1248899999999999999988 988888887652 2211
Q ss_pred Eeec---CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 161 LRAC---SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 161 l~~~---~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
.... ...-..+.|+++|+|..|+.. .+ ++.+..+|+.
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~-----------~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAF-----------GG-PRALTAFDVS 214 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEE-----------SS-SSSEEEEECS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEE-----------cC-CCeEEEEcCC
Confidence 1111 112236789999976555443 23 6777777776
No 281
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.15 E-value=0.067 Score=61.63 Aligned_cols=170 Identities=12% Similarity=0.093 Sum_probs=111.0
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeC------CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 006743 5 KDEHLASISLSGDLILHNLASGAKAAELKD------PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (633)
Q Consensus 5 dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~------~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~ 78 (633)
+|. |..|+.+ -|.+||..+++....... -....|.++...++|. |..|..++-|.+|+...... ..+.
T Consensus 273 ~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~--~~~~ 346 (795)
T 4a2l_A 273 QNR-LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG--MWLGTYFGGLNYYHPIRNRF--KNIR 346 (795)
T ss_dssp TSC-EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC--EEEEESSSCEEEECGGGGSS--EEEC
T ss_pred CCC-EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC--EEEEECCCCeEEeCCCcccc--eEEc
Confidence 344 4445555 588899766654332211 1235688888888876 77788888899998765542 2221
Q ss_pred c-------CCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee---------CCCCeEEEEEecCCCEEEEEEc
Q 006743 79 Q-------HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT---------YEAPFSSLAFIDDDWILTAGTS 142 (633)
Q Consensus 79 ~-------H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~---------h~~~ItsLafSPdG~~LatGs~ 142 (633)
. ....|.++...++++ |..|+.++-|.+||..+++...... ....|.+++..++|..|.+|+.
T Consensus 347 ~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~ 425 (795)
T 4a2l_A 347 NIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH 425 (795)
T ss_dssp CCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET
T ss_pred CCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC
Confidence 1 235699999888776 4557777779999998776544321 1356899999988886778888
Q ss_pred CCeEEEEECCCCCCceEEEeec---CCCCCeeEEEEccCCCeEE
Q 006743 143 NGRVVFYDIRGKPQPLTVLRAC---SSSEAVSSLCWQRAKPVFI 183 (633)
Q Consensus 143 DGsV~IWDlrs~~k~v~~l~~~---~H~~~VtsLafsPdg~~La 183 (633)
++-|.+||.+++. +..+... .....|.++..+++|...+
T Consensus 426 ~~Gl~~~d~~~~~--~~~~~~~~~~l~~~~v~~i~~d~~g~lwi 467 (795)
T 4a2l_A 426 AGGLSILHRNSGQ--VENFNQRNSQLVNENVYAILPDGEGNLWL 467 (795)
T ss_dssp TTEEEEEETTTCC--EEEECTTTSCCSCSCEEEEEECSSSCEEE
T ss_pred cCceeEEeCCCCc--EEEeecCCCCcCCCeeEEEEECCCCCEEE
Confidence 7789999988753 2222210 1245688888777655443
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.14 E-value=0.011 Score=63.78 Aligned_cols=138 Identities=13% Similarity=0.069 Sum_probs=88.1
Q ss_pred EEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCC-C----eEEEEeCCCC
Q 006743 40 LRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD-K----KLYTYDPGSR 113 (633)
Q Consensus 40 VssLafSp-dg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~D-G----tVrIWDlrtg 113 (633)
...|+|+| ++. .|+.+...+.|+.+|..+.. +..+.........|+|++++++|+.+... + .+.+++. .+
T Consensus 139 P~~lavdp~~~g-~Lyv~d~~~~I~~id~~~~~--v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 139 AVWLSFDPKNHN-HLYLVGEQHPTRLIDFEKEY--VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCEEEEETTEEE-EEEEEEBTEEEEEEETTTTE--EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCEEEECCCCCC-eEEEEeCCCcEEEEECCCCE--EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 35688997 344 45555555889999998765 34444455678999999999966666542 1 3444443 33
Q ss_pred cee--eEeeCCCCeEEEEEec-CCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEE
Q 006743 114 RPS--SCITYEAPFSSLAFID-DDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFI 183 (633)
Q Consensus 114 k~v--~~i~h~~~ItsLafSP-dG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~La 183 (633)
... ..+........++++| +|.++++-..++.|+.||...... ..+...........++|+|++++|+
T Consensus 215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~--~~~~~~~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET--TPLFTIQDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE--EEEEECSSSSCCEEEEECTTSSEEE
T ss_pred ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE--EEEEEcCCCCcceeEEEcCCCCEEE
Confidence 222 2333344567788999 677666666789999999986521 1222222234578899999876443
No 283
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.10 E-value=0.053 Score=62.49 Aligned_cols=168 Identities=12% Similarity=0.128 Sum_probs=110.4
Q ss_pred EEEEECCCcEEEEECCCCceeEEEeC------CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-c--
Q 006743 9 LASISLSGDLILHNLASGAKAAELKD------PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-Q-- 79 (633)
Q Consensus 9 LaSgs~DG~I~IWDl~tgk~v~~~~~------~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~-~-- 79 (633)
|-.|+.++-|..|+..++.. ..+.. -....|.++...+++. |..|..++-|..||..+... ..+. .
T Consensus 323 lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~~--~~~~~~~~ 397 (795)
T 4a2l_A 323 MWLGTYFGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQRF--TSYTLQED 397 (795)
T ss_dssp EEEEESSSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCCE--EEECCC--
T ss_pred EEEEECCCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCcE--EEEecCCC
Confidence 44577777788888654432 22221 1235688888887776 77788887899999877652 2221 1
Q ss_pred ------CCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee-----CCCCeEEEEEecCCCEEEEEEcCCeEEE
Q 006743 80 ------HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-----YEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (633)
Q Consensus 80 ------H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~-----h~~~ItsLafSPdG~~LatGs~DGsV~I 148 (633)
....|.+++..++++.|..|+.++-|.+||.++++...... ....|.++...++|.+.+ |+.+| |.+
T Consensus 398 ~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~~G-l~~ 475 (795)
T 4a2l_A 398 ESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWL-GTLSA-LVR 475 (795)
T ss_dssp ----CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE-EESSC-EEE
T ss_pred CcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE-EecCc-eeE
Confidence 23579999998888867778887789999998877554331 245789999888887554 44444 888
Q ss_pred EECCCCCCceEEEee-----cCCCCCeeEEEEccCCCeEEEe
Q 006743 149 YDIRGKPQPLTVLRA-----CSSSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 149 WDlrs~~k~v~~l~~-----~~H~~~VtsLafsPdg~~Las~ 185 (633)
||..+.. +..+.. .-....|.++..+++|...+..
T Consensus 476 ~~~~~~~--~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 476 FNPEQRS--FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp EETTTTE--EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred EeCCCCe--EEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 9987652 122211 0123568888888877655543
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.05 E-value=0.15 Score=59.71 Aligned_cols=151 Identities=11% Similarity=-0.032 Sum_probs=94.4
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCC----ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 006743 2 YNCKDEHLASIS-LSGDLILHNLASG----AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (633)
Q Consensus 2 FSpdG~~LaSgs-~DG~I~IWDl~tg----k~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~ 76 (633)
|++.++.|+... ..+.|+.+++... .....+. ........|++.+.+++++++-...+.|.+.++.+... ...
T Consensus 431 ~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~-~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~-~~l 508 (791)
T 3m0c_C 431 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTL 508 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC--------CEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEE
T ss_pred ecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe-cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE-EEE
Confidence 344344444333 3455666666432 1122222 12233456888888876777777889999999987663 222
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceeeEee-CCCCeEEEEEecCCCEEEEEE-cCCeEEEEECC
Q 006743 77 LKQHSAPTAGISFSSDDKIIASVG-LD-KKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIR 152 (633)
Q Consensus 77 l~~H~~~VtsLafSPdg~~LaSgS-~D-GtVrIWDlrtgk~v~~i~-h~~~ItsLafSPdG~~LatGs-~DGsV~IWDlr 152 (633)
+.........|++.|...+|+... .+ +.|.+.++........+. .-.....|++++.+..|+.+. ..+.|..+|+.
T Consensus 509 ~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 509 FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 333445689999999655555554 33 689999987544443433 335789999998777666654 45789999997
Q ss_pred CC
Q 006743 153 GK 154 (633)
Q Consensus 153 s~ 154 (633)
..
T Consensus 589 G~ 590 (791)
T 3m0c_C 589 GG 590 (791)
T ss_dssp SC
T ss_pred CC
Confidence 65
No 285
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.04 E-value=0.021 Score=64.61 Aligned_cols=149 Identities=14% Similarity=0.048 Sum_probs=94.5
Q ss_pred CCEEEEEEC-CCcEEEEEC-CCCceeEEEeCCCCC----------cEEEEEEccCCC---eEEEEEeCCCeEEEEECCCC
Q 006743 6 DEHLASISL-SGDLILHNL-ASGAKAAELKDPNEQ----------VLRVLDYSRNSR---HLLVTAGDDGTLHLWDTTGR 70 (633)
Q Consensus 6 G~~LaSgs~-DG~I~IWDl-~tgk~v~~~~~~~~~----------~VssLafSpdg~---~lLaSGs~DGtI~IWDl~t~ 70 (633)
+..|++++. ++.|+.+|. .+|+.+-++...... ....+++.|.+. ..++.++.|+.|+.+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 556777887 899999999 899998777642211 112244533333 13778889999999999988
Q ss_pred CceeEE-eccCC--CCeEE-EEEcCCCCEEEEEe------CCCeEEEEeCCCCceeeEeeCCCCe---------------
Q 006743 71 SPKVSW-LKQHS--APTAG-ISFSSDDKIIASVG------LDKKLYTYDPGSRRPSSCITYEAPF--------------- 125 (633)
Q Consensus 71 ~~~v~~-l~~H~--~~Vts-LafSPdg~~LaSgS------~DGtVrIWDlrtgk~v~~i~h~~~I--------------- 125 (633)
+..-+. +..+. ..+.+ ..+. ++ .+++++ .++.|+.+|.++++.+-.+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 843221 11110 01111 1111 34 555554 3899999999999987665322211
Q ss_pred ------------------------EEEEEecCCCEEEEEEcCC----------------eEEEEECCCCCC
Q 006743 126 ------------------------SSLAFIDDDWILTAGTSNG----------------RVVFYDIRGKPQ 156 (633)
Q Consensus 126 ------------------------tsLafSPdG~~LatGs~DG----------------sV~IWDlrs~~k 156 (633)
..+++.++...|+.+..++ .|+.+|.++++.
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~ 290 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEA 290 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCE
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCce
Confidence 1356777778888887663 799999998843
No 286
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.96 E-value=0.011 Score=66.63 Aligned_cols=80 Identities=14% Similarity=0.140 Sum_probs=52.3
Q ss_pred CCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEE--EEEecCCC-
Q 006743 59 DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSS--LAFIDDDW- 135 (633)
Q Consensus 59 DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~Its--LafSPdG~- 135 (633)
+|.|+.||+.+++.. +-..+...+..-.....+.+++.++.|+.|+.||.++++.+..+.....+.+ +.|..+|+
T Consensus 465 ~G~l~A~D~~tG~~~--W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 465 VGSLRAMDPVSGKVV--WEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTCCEE--EEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cceEEEEECCCCCEE--EEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 688999999888732 2222222222212222467888899999999999999999988765444433 56667776
Q ss_pred EEEEE
Q 006743 136 ILTAG 140 (633)
Q Consensus 136 ~LatG 140 (633)
||++.
T Consensus 543 Yv~~~ 547 (582)
T 1flg_A 543 YLGVT 547 (582)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44433
No 287
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.88 E-value=0.21 Score=56.76 Aligned_cols=171 Identities=10% Similarity=-0.002 Sum_probs=111.3
Q ss_pred CEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEE
Q 006743 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAG 86 (633)
Q Consensus 7 ~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~Vts 86 (633)
.+|+.+ ..+.|+..++........+....-.....|+|.+.+..++++-..++.|+.+++.+... ...+.........
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v~~~g~~~P~G 84 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHVVEFGLDYPEG 84 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCE
T ss_pred cEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEEEeCCCCCcce
Confidence 345444 56789999998665443333222234667999998776777777789999999987652 2333333346788
Q ss_pred EEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEc--CCeEEEEECCCCCCceEEEe
Q 006743 87 ISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTS--NGRVVFYDIRGKPQPLTVLR 162 (633)
Q Consensus 87 LafSPd-g~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~--DGsV~IWDlrs~~k~v~~l~ 162 (633)
+++.+. ++++++-...+.|.+.|+........+ ..-.....++++|...+|+.... .+.|...++..... ..+.
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~--~~l~ 162 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER--TTLV 162 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EEEE
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce--EEEE
Confidence 999875 445555556779999998765433333 34456889999996556665542 57888888876532 2222
Q ss_pred ecCCCCCeeEEEEccCCCeEE
Q 006743 163 ACSSSEAVSSLCWQRAKPVFI 183 (633)
Q Consensus 163 ~~~H~~~VtsLafsPdg~~La 183 (633)
..-.....|++++++..|.
T Consensus 163 --~~~~~P~GlalD~~~~~LY 181 (628)
T 4a0p_A 163 --PNVGRANGLTIDYAKRRLY 181 (628)
T ss_dssp --CSCSSEEEEEEETTTTEEE
T ss_pred --CCCCCcceEEEccccCEEE
Confidence 2345678889888654443
No 288
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.84 E-value=0.057 Score=62.06 Aligned_cols=163 Identities=12% Similarity=0.028 Sum_probs=100.6
Q ss_pred EEEEEECCCcEEEEECCCCceeEEEe---CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec---cCC
Q 006743 8 HLASISLSGDLILHNLASGAKAAELK---DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK---QHS 81 (633)
Q Consensus 8 ~LaSgs~DG~I~IWDl~tgk~v~~~~---~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~---~H~ 81 (633)
.|..|+.++-|.+||..++... .+. ......|.++...+++. |..|..++-|.+||..+.. ...+. ...
T Consensus 375 ~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~ 449 (781)
T 3v9f_A 375 KLWIGTDGGGINVFENGKRVAI-YNKENRELLSNSVLCSLKDSEGN--LWFGTYLGNISYYNTRLKK--FQIIELEKNEL 449 (781)
T ss_dssp CEEEEEBSSCEEEEETTEEEEE-CC-----CCCSBEEEEEECTTSC--EEEEETTEEEEEECSSSCE--EEECCSTTTCC
T ss_pred CEEEEeCCCcEEEEECCCCeEE-EccCCCCCCCcceEEEEECCCCC--EEEEeccCCEEEEcCCCCc--EEEeccCCCCC
Confidence 3455666667888887544322 111 11245688888777776 6667877779999987665 23332 134
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeC------CCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCC
Q 006743 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY------EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKP 155 (633)
Q Consensus 82 ~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h------~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~ 155 (633)
..|.++...+++. |..|+. +-|.+||..+++....... ...|.+++..++|.+. +|+.++-|..||.++..
T Consensus 450 ~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 450 LDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW-IGTFGGGVGIYTPDMQL 526 (781)
T ss_dssp CCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE-EEESSSCEEEECTTCCE
T ss_pred CeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE-EEEcCCCEEEEeCCCCe
Confidence 6799998887776 444555 5589999987765443321 3578999998888755 45553347789887642
Q ss_pred CceEEEeec--CCCCCeeEEEEccCCC
Q 006743 156 QPLTVLRAC--SSSEAVSSLCWQRAKP 180 (633)
Q Consensus 156 k~v~~l~~~--~H~~~VtsLafsPdg~ 180 (633)
+..+... -....|.++..+++|.
T Consensus 527 --~~~~~~~~~l~~~~i~~i~~d~~g~ 551 (781)
T 3v9f_A 527 --VRKFNQYEGFCSNTINQIYRSSKGQ 551 (781)
T ss_dssp --EEEECTTTTCSCSCEEEEEECTTSC
T ss_pred --EEEccCCCCCCCCeeEEEEECCCCC
Confidence 2222211 1134577777766443
No 289
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.82 E-value=0.14 Score=54.19 Aligned_cols=168 Identities=12% Similarity=0.105 Sum_probs=97.6
Q ss_pred CCCcEEEEECCC--Cce-eEEEeCC----CCCcEEEEEEcc--CCCeEEEEEe-C--CCeEEEEECCCCCce---eEEec
Q 006743 14 LSGDLILHNLAS--GAK-AAELKDP----NEQVLRVLDYSR--NSRHLLVTAG-D--DGTLHLWDTTGRSPK---VSWLK 78 (633)
Q Consensus 14 ~DG~I~IWDl~t--gk~-v~~~~~~----~~~~VssLafSp--dg~~lLaSGs-~--DGtI~IWDl~t~~~~---v~~l~ 78 (633)
.+|.|.++|..+ ++. ...+.+. ..-....|.+.+ ++..+|+.+. . +..|.||++...... +..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 689999999874 221 1123321 112445566655 4543444443 3 467888887543322 22222
Q ss_pred cC-CCCeEEEEEcCCCCEEEEEe-----------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEE
Q 006743 79 QH-SAPTAGISFSSDDKIIASVG-----------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAG 140 (633)
Q Consensus 79 ~H-~~~VtsLafSPdg~~LaSgS-----------------~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatG 140 (633)
+. -...+++++.++|.++++.. ..+.|+.||.. +.......-...+.++|+||++.|+++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEE
Confidence 21 24578999999998777654 12567777763 333333444568899999999888776
Q ss_pred E-cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEcc-CCCeEEE
Q 006743 141 T-SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR-AKPVFID 184 (633)
Q Consensus 141 s-~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsP-dg~~Las 184 (633)
. ..+.|+.||+..... +...+.+...+..-.+++++ +|.+.++
T Consensus 239 dt~~~~I~~~~~~~~g~-l~~~~~~~~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 239 ELLAHKIHVYEKHANWT-LTPLRVLSFDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp EGGGTEEEEEEECTTSC-EEEEEEEECSSEEEEEEECTTTCCEEEE
T ss_pred eCCCCeEEEEEECCCCc-EecCEEEeCCCCCceEEEeCCCCcEEEE
Confidence 5 568899999874322 11111112245566777776 3554443
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.82 E-value=0.19 Score=56.92 Aligned_cols=169 Identities=7% Similarity=-0.006 Sum_probs=101.5
Q ss_pred EECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcC
Q 006743 12 ISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS 91 (633)
Q Consensus 12 gs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSP 91 (633)
-.....|+..++........+..........|+|++.+..++++=...+.|+.+++.+.......+...-.....+++.+
T Consensus 14 ~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~ 93 (619)
T 3s94_A 14 YANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 93 (619)
T ss_dssp EECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEET
T ss_pred EeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEe
Confidence 34577899999865431111211123345679999877756666556788999998765322233343336789999998
Q ss_pred CC-CEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEEc--CCeEEEEECCCCCCceEEEeecCCC
Q 006743 92 DD-KIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTS--NGRVVFYDIRGKPQPLTVLRACSSS 167 (633)
Q Consensus 92 dg-~~LaSgS~DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs~--DGsV~IWDlrs~~k~v~~l~~~~H~ 167 (633)
.+ +++++-...+.|.+.|+........+ ..-.....|+++|.+.+|+.... .+.|...++..... ..... ..-
T Consensus 94 ~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~-~~l~~--~~~ 170 (619)
T 3s94_A 94 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIIN--SEI 170 (619)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEEC--SSC
T ss_pred cCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-EEEEe--CCC
Confidence 54 45555556789999999765443333 34456788999997666665553 46788888776422 22222 234
Q ss_pred CCeeEEEEccCCCeEE
Q 006743 168 EAVSSLCWQRAKPVFI 183 (633)
Q Consensus 168 ~~VtsLafsPdg~~La 183 (633)
.....|++++++..|.
T Consensus 171 ~~P~Glald~~~~~LY 186 (619)
T 3s94_A 171 YWPNGLTLDYEEQKLY 186 (619)
T ss_dssp SSEEEEEEETTTTEEE
T ss_pred CCCcEEEEEccCCEEE
Confidence 5678899988644443
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.80 E-value=0.082 Score=58.53 Aligned_cols=151 Identities=9% Similarity=0.084 Sum_probs=91.5
Q ss_pred ccC-CCCEEEEEEC-CCcEEEEECCCCceeEEEeCCC--CCcEEEEEE-------ccCCCeEEEEEeCCC------eEEE
Q 006743 2 YNC-KDEHLASISL-SGDLILHNLASGAKAAELKDPN--EQVLRVLDY-------SRNSRHLLVTAGDDG------TLHL 64 (633)
Q Consensus 2 FSp-dG~~LaSgs~-DG~I~IWDl~tgk~v~~~~~~~--~~~VssLaf-------Spdg~~lLaSGs~DG------tI~I 64 (633)
|+| ++..|+++.. .+.|++.|++++.....+.... ......|+| +++++.++++-..++ .|.+
T Consensus 146 ~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~ 225 (496)
T 3kya_A 146 FDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYI 225 (496)
T ss_dssp EETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEE
T ss_pred EccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEE
Confidence 566 3445555543 4678889987766554443221 234778999 999984444444332 2666
Q ss_pred EECCC-CCce----eEEeccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEeCC-------CCce-----------e-eEe
Q 006743 65 WDTTG-RSPK----VSWLKQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPG-------SRRP-----------S-SCI 119 (633)
Q Consensus 65 WDl~t-~~~~----v~~l~~H~~~VtsLafSP-dg~~LaSgS~DGtVrIWDlr-------tgk~-----------v-~~i 119 (633)
++... +... ...+... ....+++++| ++.++++-..++.|+.+|+. ++.. . ..+
T Consensus 226 i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~ 304 (496)
T 3kya_A 226 IKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLF 304 (496)
T ss_dssp EECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEE
T ss_pred EecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeE
Confidence 66433 1211 0122222 2345788999 56666677788899999997 5543 1 112
Q ss_pred --eCCCCeEEEEEecCCCEEEEE-EcCCeEEEEECCC
Q 006743 120 --TYEAPFSSLAFIDDDWILTAG-TSNGRVVFYDIRG 153 (633)
Q Consensus 120 --~h~~~ItsLafSPdG~~LatG-s~DGsV~IWDlrs 153 (633)
........|+|+|+|++|..+ .....|+.+|...
T Consensus 305 ~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 305 TIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp ECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 234557899999999965555 4567899876654
No 292
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.79 E-value=0.11 Score=59.76 Aligned_cols=168 Identities=10% Similarity=0.073 Sum_probs=104.2
Q ss_pred EEEEECCCcEEEEECCCCceeEEEeC--CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC-----C
Q 006743 9 LASISLSGDLILHNLASGAKAAELKD--PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH-----S 81 (633)
Q Consensus 9 LaSgs~DG~I~IWDl~tgk~v~~~~~--~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H-----~ 81 (633)
|..|+.++-|..+|..+++. ..+.. .....|.++...+++. |..|.. +-|.+||..+..... ..... .
T Consensus 420 lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~--lwigt~-~Gl~~~~~~~~~~~~-~~~~~~~~~~~ 494 (781)
T 3v9f_A 420 LWFGTYLGNISYYNTRLKKF-QIIELEKNELLDVRVFYEDKNKK--IWIGTH-AGVFVIDLASKKVIH-HYDTSNSQLLE 494 (781)
T ss_dssp EEEEETTEEEEEECSSSCEE-EECCSTTTCCCCEEEEEECTTSE--EEEEET-TEEEEEESSSSSCCE-EECTTTSSCSC
T ss_pred EEEEeccCCEEEEcCCCCcE-EEeccCCCCCCeEEEEEECCCCC--EEEEEC-CceEEEeCCCCeEEe-cccCccccccc
Confidence 44466667788888766543 23321 1345678887777765 566666 568899987765322 11111 3
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee----CCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc
Q 006743 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (633)
Q Consensus 82 ~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~----h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~ 157 (633)
..|.++...+++++.+ |+.++-|..||.++++...... ....|.++...++|.+. .|+.+|.|..||..+..
T Consensus 495 ~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-i~T~~Glv~~~d~~~~~-- 570 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMW-LATGEGLVCFPSARNFD-- 570 (781)
T ss_dssp SCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEE-EEETTEEEEESCTTTCC--
T ss_pred ceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEE-EEECCCceEEECCCCCc--
Confidence 6799999988887555 4543347889988765544321 23568899988888754 45557766899987653
Q ss_pred eEEEeec-C-CCCCeeEEEEccCCCeEEEe
Q 006743 158 LTVLRAC-S-SSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 158 v~~l~~~-~-H~~~VtsLafsPdg~~Las~ 185 (633)
+..+... + ....|.++..+++|...+..
T Consensus 571 ~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 571 YQVFQRKEGLPNTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp CEEECGGGTCSCCCCCEEEECSSSCEEEEC
T ss_pred EEEccccCCCCCceEEEEEECCCCCEEEEc
Confidence 2333211 1 12457788887766655543
No 293
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.77 E-value=0.51 Score=53.51 Aligned_cols=170 Identities=6% Similarity=-0.008 Sum_probs=108.9
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 2 FSpdG~~LaSgs-~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
|++.++.|+.+. .++.|..+++........+.. .......|++.+.+.+++++-...+.|.+.++.+.... ..+...
T Consensus 44 ~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~-g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~-~l~~~~ 121 (628)
T 4a0p_A 44 FDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF-GLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ-VLVWKD 121 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE-EEECSS
T ss_pred EECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC-CCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE-EEEeCC
Confidence 566666665554 457788888754433333322 22334568888777767777777889999999876532 223344
Q ss_pred CCCeEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCCCCc
Q 006743 81 SAPTAGISFSSDDKIIASVG--LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQP 157 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS--~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs-~DGsV~IWDlrs~~k~ 157 (633)
-....+|++.|....|+... ..+.|...++...........-.....|++++++..|..+. ..+.|..+|+.....
T Consensus 122 l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~- 200 (628)
T 4a0p_A 122 LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR- 200 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-
Confidence 45679999999554555544 25688888887655444445556789999999877776655 567899999987543
Q ss_pred eEEEeecCCCCCeeEEEEcc
Q 006743 158 LTVLRACSSSEAVSSLCWQR 177 (633)
Q Consensus 158 v~~l~~~~H~~~VtsLafsP 177 (633)
+++. .......++++..
T Consensus 201 -~v~~--~~l~~P~glav~~ 217 (628)
T 4a0p_A 201 -EVIA--DDLPHPFGLTQYQ 217 (628)
T ss_dssp -EEEE--ECCSCEEEEEEET
T ss_pred -EEee--ccCCCceEEEEEC
Confidence 3333 1233455677654
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.71 E-value=0.037 Score=61.29 Aligned_cols=141 Identities=11% Similarity=0.047 Sum_probs=87.4
Q ss_pred EEEEEEccC-CCeEEEEEeCCCeEEEEECCCCCceeEEeccC----CCCeEEEEE-------cCCCCEEEEEeCCC----
Q 006743 40 LRVLDYSRN-SRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH----SAPTAGISF-------SSDDKIIASVGLDK---- 103 (633)
Q Consensus 40 VssLafSpd-g~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H----~~~VtsLaf-------SPdg~~LaSgS~DG---- 103 (633)
...|+|.|. +.+++++-...+.|++.|+.++. +..+... ......|+| ++++++|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~--v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM--LSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTE--EEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCE--EEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 456899983 55455555555778888988776 3333222 235799999 99999777766554
Q ss_pred ---eEEEEeCCC-Ccee-----eEeeCCCCeEEEEEecC-CCEEEEEEcCCeEEEEECC-------CCCC-----c----
Q 006743 104 ---KLYTYDPGS-RRPS-----SCITYEAPFSSLAFIDD-DWILTAGTSNGRVVFYDIR-------GKPQ-----P---- 157 (633)
Q Consensus 104 ---tVrIWDlrt-gk~v-----~~i~h~~~ItsLafSPd-G~~LatGs~DGsV~IWDlr-------s~~k-----~---- 157 (633)
.|.+++... +... ..+........++++|+ +.++++-..++.|+.||+. ++.. +
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 377776443 2221 23322235567889995 5555566678889999997 4432 0
Q ss_pred -eEEEeecCCCCCeeEEEEccCCCeE
Q 006743 158 -LTVLRACSSSEAVSSLCWQRAKPVF 182 (633)
Q Consensus 158 -v~~l~~~~H~~~VtsLafsPdg~~L 182 (633)
...+...........|+|+|+|++|
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~l 324 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYA 324 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEE
Confidence 1222222334567899999987643
No 295
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.71 E-value=0.16 Score=52.14 Aligned_cols=146 Identities=14% Similarity=0.148 Sum_probs=81.3
Q ss_pred CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEE-ECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCe
Q 006743 26 GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLW-DTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKK 104 (633)
Q Consensus 26 gk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IW-Dl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGt 104 (633)
|+.-..+.......+..+++.+++. +++.+ .+|.++.- |-..... ...-......+..+.+.+++..+ .++.+|.
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~G~~~~S~d~gG~tW-~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~ 226 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPSGE-YVAVS-SRGSFYSTWEPGQTAW-EPHNRTTSRRLHNMGFTPDGRLW-MIVNGGK 226 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTTSC-EEEEE-TTSSEEEEECTTCSSC-EEEECCSSSCEEEEEECTTSCEE-EEETTTE
T ss_pred CCCCEEeecCCCcceEEEEEcCCCc-EEEEE-CCCcEEEEeCCCCCce-eECCCCCCCccceeEECCCCCEE-EEeCCce
Confidence 4433334333445677889998876 55544 45555443 3212221 11223455678999999887655 5556788
Q ss_pred EEEEeCCCCceeeEee-----CCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeec-CCCCCeeEEEEccC
Q 006743 105 LYTYDPGSRRPSSCIT-----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRAC-SSSEAVSSLCWQRA 178 (633)
Q Consensus 105 VrIWDlrtgk~v~~i~-----h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~-~H~~~VtsLafsPd 178 (633)
+++.+...++.-..+. ....+.++++.+++.+++++. +|.| ++..+.+ +....+... .....+.++.|.++
T Consensus 227 ~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG-~tW~~~~~~~~~~~~~~~v~~~~~ 303 (327)
T 2xbg_A 227 IAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGG-QTWQQDVDVKKVPSNFYKILFFSP 303 (327)
T ss_dssp EEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTT-SSCEECGGGTTSSSCCCEEEEEET
T ss_pred EEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCC-cccEEcCccCCCCCCeEEEEEECC
Confidence 8877533233222221 224588999998877666554 6766 3444444 223333311 23456778888653
No 296
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.63 E-value=0.063 Score=58.00 Aligned_cols=150 Identities=8% Similarity=-0.061 Sum_probs=91.9
Q ss_pred ccC-CCCEEEEEECCCcEEEEECCCCceeEE-EeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC--CCce-eEE
Q 006743 2 YNC-KDEHLASISLSGDLILHNLASGAKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG--RSPK-VSW 76 (633)
Q Consensus 2 FSp-dG~~LaSgs~DG~I~IWDl~tgk~v~~-~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t--~~~~-v~~ 76 (633)
+++ +|.++++-..++.|+.+|..++..... +.......-..|+|+|+++.++++-...+.|+.++... .... ...
T Consensus 235 vd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~ 314 (433)
T 4hw6_A 235 VHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYI 314 (433)
T ss_dssp ECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEE
T ss_pred EeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEE
Confidence 456 555554444667899999877765332 22222233346999999985666666678999988753 2110 111
Q ss_pred eccC---------------CCCeEEEEE---------cCCCCEEEEEeCCCeEEEEeCCCCceeeEeeC-----------
Q 006743 77 LKQH---------------SAPTAGISF---------SSDDKIIASVGLDKKLYTYDPGSRRPSSCITY----------- 121 (633)
Q Consensus 77 l~~H---------------~~~VtsLaf---------SPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h----------- 121 (633)
+.+. -.....+++ .++++++++-...+.|+.+|. ++......+.
T Consensus 315 ~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG 393 (433)
T 4hw6_A 315 VCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDG 393 (433)
T ss_dssp EEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCE
T ss_pred EEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCC
Confidence 1111 123567899 667777777677789999985 4544333321
Q ss_pred -------CCCeEEEEEe-cCCCEEEEEEcCCeEEEEECC
Q 006743 122 -------EAPFSSLAFI-DDDWILTAGTSNGRVVFYDIR 152 (633)
Q Consensus 122 -------~~~ItsLafS-PdG~~LatGs~DGsV~IWDlr 152 (633)
-.....|+++ ++|.++++-..++.|+.++++
T Consensus 394 ~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 394 ELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp ETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 1236788998 566666555567788887764
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.59 E-value=0.0083 Score=69.06 Aligned_cols=151 Identities=10% Similarity=-0.018 Sum_probs=88.8
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCC----CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 006743 2 YNCKDEHLASIS-LSGDLILHNLAS----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (633)
Q Consensus 2 FSpdG~~LaSgs-~DG~I~IWDl~t----gk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~ 76 (633)
|++.++.|+.+. ..+.|+.+++.. ......+.. .......|++.+.+.+++++-...+.|.++++.+... ...
T Consensus 413 ~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~-~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~-~~l 490 (699)
T 1n7d_A 413 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTL 490 (699)
T ss_dssp EETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS-CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCE-EEE
T ss_pred cccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC-CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCce-EEE
Confidence 555566665554 346788888764 121111111 1112334677765555666656678999999887652 222
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEE-EEEcCCeEEEEECC
Q 006743 77 LKQHSAPTAGISFSSDDKIIASVG-LD-KKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILT-AGTSNGRVVFYDIR 152 (633)
Q Consensus 77 l~~H~~~VtsLafSPdg~~LaSgS-~D-GtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~La-tGs~DGsV~IWDlr 152 (633)
+.........|++.|.+.+|+.+. .. +.|.++++........+ ..-.....|+|+|++..|+ +-...+.|.++|+.
T Consensus 491 ~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 491 FREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp CCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred EeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 232334568899999555444443 23 67888887643322222 2234567899999765555 44556789999997
Q ss_pred CC
Q 006743 153 GK 154 (633)
Q Consensus 153 s~ 154 (633)
..
T Consensus 571 G~ 572 (699)
T 1n7d_A 571 GG 572 (699)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 298
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.54 E-value=0.084 Score=64.24 Aligned_cols=178 Identities=7% Similarity=0.024 Sum_probs=111.9
Q ss_pred CcEEEEECCCCceeEEEeCCCCCcEEEEEE---ccCCCeEEEEEe----------CCCeEEEEECCCCCceeEEeccCCC
Q 006743 16 GDLILHNLASGAKAAELKDPNEQVLRVLDY---SRNSRHLLVTAG----------DDGTLHLWDTTGRSPKVSWLKQHSA 82 (633)
Q Consensus 16 G~I~IWDl~tgk~v~~~~~~~~~~VssLaf---Spdg~~lLaSGs----------~DGtI~IWDl~t~~~~v~~l~~H~~ 82 (633)
+.|++.|..+.+.+..+.-...+.+.+++. ..+...+|+.|. ..|.|++|++...+.....-....+
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 468899988888887776555666666553 333334788776 3578999999755433333344568
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeE-eeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEE
Q 006743 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC-ITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVL 161 (633)
Q Consensus 83 ~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~-i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l 161 (633)
+|++++-- +|+ |++|- ..+|++||+...+.+.. ..+...|..+...-.+++|++|..-..|.++..+.....+..+
T Consensus 887 ~v~al~~~-~g~-Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~ 963 (1158)
T 3ei3_A 887 AVYSMVEF-NGK-LLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEI 963 (1158)
T ss_dssp CEEEEEEE-TTE-EEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEE
T ss_pred cCEEEeee-CCE-EEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEE
Confidence 89988744 464 44433 46899999987654442 1222223333333457899999988888776655443444555
Q ss_pred eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 162 RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 162 ~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
....+..++++++|-.+ ..++.+..++.+.+....
T Consensus 964 a~D~~~~~vta~~~ld~-------------~t~l~aD~~gNl~vl~~~ 998 (1158)
T 3ei3_A 964 ARDFNPNWMSAVEILDD-------------DNFLGAENAFNLFVCQKD 998 (1158)
T ss_dssp EECCSCBCEEEEEEEET-------------TEEEEEETTSEEEEEEEC
T ss_pred EeecccccEEEEEEEcc-------------CcEEEEcCCCcEEEEecC
Confidence 54456778888887543 234555667777776553
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.34 E-value=0.0055 Score=70.54 Aligned_cols=180 Identities=7% Similarity=-0.053 Sum_probs=104.8
Q ss_pred CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC---CceeEEeccCCCCeEEEEEc
Q 006743 14 LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR---SPKVSWLKQHSAPTAGISFS 90 (633)
Q Consensus 14 ~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~---~~~v~~l~~H~~~VtsLafS 90 (633)
..+.|++.++...+....+.. ...+..|+|.+.+..++++-...+.|+.+++.+. ......+.........|++.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~--~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCC--CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred CccceEEEeCCCCcceeeecc--CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 345778888766554433332 2234568999877655555556789999998751 11122222222345678888
Q ss_pred C-CCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEecCCCEEEEEEc-C-CeEEEEECCCCCCceEEEeecCC
Q 006743 91 S-DDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTS-N-GRVVFYDIRGKPQPLTVLRACSS 166 (633)
Q Consensus 91 P-dg~~LaSgS~DGtVrIWDlrtgk~v~~i~-h~~~ItsLafSPdG~~LatGs~-D-GsV~IWDlrs~~k~v~~l~~~~H 166 (633)
+ .++++++-...+.|.++|+........+. .......++++|.+.+|+.... . +.|+++++..... ..+.. ..
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~--~~l~~-~~ 538 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YSLVT-EN 538 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC--CEESC-SS
T ss_pred eeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe--eEEEe-CC
Confidence 6 45555555567789999987655444443 2345678899997655554432 3 7888888875422 12211 12
Q ss_pred CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 167 SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 167 ~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
-.....|+|+|++. .++++-...+.|.++|+.
T Consensus 539 l~~PnGlavd~~~~-----------~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 539 IQWPNGITLDLLSG-----------RLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp CSSCCCEEECTTTC-----------CEEEEETTTTEEEEECSS
T ss_pred CCCccEEEEeccCC-----------EEEEEecCCCeEEEEccC
Confidence 34567788988633 344444556677777763
No 300
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.23 E-value=0.25 Score=52.30 Aligned_cols=138 Identities=15% Similarity=0.269 Sum_probs=91.9
Q ss_pred CCcEEEEECC--CCceeEEEeCC-----CC-CcEEEEEE--ccC-CCeEEEEEeCCCeEEEEECCC---CC---ceeEEe
Q 006743 15 SGDLILHNLA--SGAKAAELKDP-----NE-QVLRVLDY--SRN-SRHLLVTAGDDGTLHLWDTTG---RS---PKVSWL 77 (633)
Q Consensus 15 DG~I~IWDl~--tgk~v~~~~~~-----~~-~~VssLaf--Spd-g~~lLaSGs~DGtI~IWDl~t---~~---~~v~~l 77 (633)
+++|.+|++. ++ .+..+... .. ..+..+|+ ++. +..+++....+|.+..|++.. +. ..++.+
T Consensus 98 ~n~l~vf~iDp~~~-~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNG-TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTC-CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCC-ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 5789999763 33 34444221 11 34455677 564 445688888899999999832 21 123444
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCC-----CCceeeEee---CCCCeEEEEEe--cCCC-EEEEEE-cCCe
Q 006743 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPG-----SRRPSSCIT---YEAPFSSLAFI--DDDW-ILTAGT-SNGR 145 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlr-----tgk~v~~i~---h~~~ItsLafS--PdG~-~LatGs-~DGs 145 (633)
. ....+..|...+....|+.+-++.-|..||.+ +++.+..+. ....+..|++- ++++ +|++.+ .+..
T Consensus 177 ~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 177 K-MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp E-CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred c-CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 3 34678999999988899999999888888865 344555543 23568888884 4555 666665 6789
Q ss_pred EEEEECCCC
Q 006743 146 VVFYDIRGK 154 (633)
Q Consensus 146 V~IWDlrs~ 154 (633)
+.+||....
T Consensus 256 ~~Vydr~~~ 264 (355)
T 3amr_A 256 YAIYDRQGK 264 (355)
T ss_dssp EEEEESSTT
T ss_pred EEEEECCCC
Confidence 999999743
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.20 E-value=0.38 Score=54.40 Aligned_cols=152 Identities=8% Similarity=-0.033 Sum_probs=95.8
Q ss_pred ccCCCCEEEEEEC-CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006743 2 YNCKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (633)
Q Consensus 2 FSpdG~~LaSgs~-DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H 80 (633)
|++.++.|+.+.. .+.|..+++........+....-.....|++.+.+++++++-...+.|.+.++.+.... ..+...
T Consensus 47 ~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~-~l~~~~ 125 (619)
T 3s94_A 47 FVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VLFWQE 125 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECSS
T ss_pred EEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE-EEEeCC
Confidence 5565666665543 46677777654422222222222456779999877767777777899999999876532 223244
Q ss_pred CCCeEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceeeEe-eCCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCC
Q 006743 81 SAPTAGISFSSDDKIIASVGL--DKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGK 154 (633)
Q Consensus 81 ~~~VtsLafSPdg~~LaSgS~--DGtVrIWDlrtgk~v~~i-~h~~~ItsLafSPdG~~LatGs-~DGsV~IWDlrs~ 154 (633)
-....+|++.|.+.+|+.... .+.|...++......... ..-.....+++++++..|..+. ..+.|..+|+...
T Consensus 126 l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 126 LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp CSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC
T ss_pred CCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC
Confidence 456789999996555555443 467888887644333333 2445688999999776666554 4678999998764
No 302
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.16 E-value=0.25 Score=53.80 Aligned_cols=141 Identities=13% Similarity=0.119 Sum_probs=91.6
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCC---CCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC----------
Q 006743 5 KDEHLASISLSGDLILHNLASGAKAAELKDPN---EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---------- 71 (633)
Q Consensus 5 dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~---~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~---------- 71 (633)
+|..++.+ .++.|++.++.+...-+.+...+ ...+..+..+|+|+ +||.. .+..|.|-.+..+.
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGD-LLCLF-NDNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSS-EEEEE-CSSEEEEEECCTTCSCCCCHHHHH
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCC-EEEEe-cCCeEEEEEecCccccCccccccc
Confidence 44444444 35678888877554444554431 22455689999998 55555 45789999886221
Q ss_pred -ceeEEecc------CCCCeEEEEEcC---CCCEEEEEeCCCeEEEEeCCCC--ceeeEe-------e---CCCCeEEEE
Q 006743 72 -PKVSWLKQ------HSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGSR--RPSSCI-------T---YEAPFSSLA 129 (633)
Q Consensus 72 -~~v~~l~~------H~~~VtsLafSP---dg~~LaSgS~DGtVrIWDlrtg--k~v~~i-------~---h~~~ItsLa 129 (633)
.....+.- ...+|..+.|+| .+..|++-..|+.|++||+... ++. .+ + ....|.+++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence 11112221 246799999999 5679999999999999999852 222 22 1 225688899
Q ss_pred EecCCCEEEEEE--cCCeEEEE
Q 006743 130 FIDDDWILTAGT--SNGRVVFY 149 (633)
Q Consensus 130 fSPdG~~LatGs--~DGsV~IW 149 (633)
|..++-.|.+.. ..|.|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 988877666655 66777654
No 303
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.99 E-value=0.26 Score=50.65 Aligned_cols=176 Identities=13% Similarity=0.080 Sum_probs=101.8
Q ss_pred ccCCCCEEEEEECC--------------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEE---eCCCeEEE
Q 006743 2 YNCKDEHLASISLS--------------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTA---GDDGTLHL 64 (633)
Q Consensus 2 FSpdG~~LaSgs~D--------------G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSG---s~DGtI~I 64 (633)
++++|++|+-+... ..|+..++..++.. .+.. .. +..|+++++.++++- ..+..|+.
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~---~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDP---DP--CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEEC---SC--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-Eeec---CC--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 56788888766543 36777787655433 3332 11 136777888544444 23455666
Q ss_pred EECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEcC
Q 006743 65 WDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGL-DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSN 143 (633)
Q Consensus 65 WDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~-DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~D 143 (633)
.++.+.. ...+..+.. ..|+++++.|+-.+. ...|.+.++..+....++. +... ..+.|++.+|+-...+
T Consensus 134 ~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 134 IRIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp EETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGG
T ss_pred EECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcC
Confidence 6776554 334444433 345677888776665 6789999988766544433 2333 3466989888876654
Q ss_pred --CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCC
Q 006743 144 --GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD 201 (633)
Q Consensus 144 --GsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg 201 (633)
..|..-++..... ..+. ...+ ..|+|++.+|..+.... ...|.....||
T Consensus 205 ~~~~I~~~~ldG~~~--~~Lt----~~~~--~~~~~~g~~Iy~~~~~~-~~~i~~~~~DG 255 (302)
T 3s25_A 205 RDNAIVHVNINNPNP--VVLT----EANI--EHYNVYGSLIFYQRGGD-NPALCVVKNDG 255 (302)
T ss_dssp GTTEEEEECSSSCCC--EECS----CSCE--EEEEEETTEEEEEECSS-SCEEEEEETTS
T ss_pred CCcEEEEEECCCCCe--EEEe----CCCc--ceEEECCCEEEEEECCC-CcEEEEEECCC
Confidence 3677777766532 3332 1233 34788888887653322 24455555555
No 304
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.98 E-value=0.55 Score=48.87 Aligned_cols=141 Identities=13% Similarity=0.126 Sum_probs=78.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCcee--EEEe--CCCCCcEEEEEEccC---CCeEEEEEeCC-----CeEEEEECC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKA--AELK--DPNEQVLRVLDYSRN---SRHLLVTAGDD-----GTLHLWDTT 68 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v--~~~~--~~~~~~VssLafSpd---g~~lLaSGs~D-----GtI~IWDl~ 68 (633)
+|.|+|+++ ++..+|.|.+++ +++.. ..+. .........|+|+|+ +..++++-..+ +.|..|+..
T Consensus 37 a~~pdG~l~-V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~ 113 (352)
T 2ism_A 37 AFLPDGGML-IAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL 113 (352)
T ss_dssp EECTTSCEE-EEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC
T ss_pred EEcCCCeEE-EEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC
Confidence 478999844 556779999998 44421 1121 112345678999998 55355544432 678888876
Q ss_pred CCC-----ceeEEec---cCCCCeEEEEEcCCCCEEEEEeC-------------CCeEEEEeCCCC------------ce
Q 006743 69 GRS-----PKVSWLK---QHSAPTAGISFSSDDKIIASVGL-------------DKKLYTYDPGSR------------RP 115 (633)
Q Consensus 69 t~~-----~~v~~l~---~H~~~VtsLafSPdg~~LaSgS~-------------DGtVrIWDlrtg------------k~ 115 (633)
... ..+..+. ........|+|.|+|.++++.+. .+.|..+|.... ..
T Consensus 114 ~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~ 193 (352)
T 2ism_A 114 GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGAR 193 (352)
T ss_dssp SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSC
T ss_pred CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCC
Confidence 432 1111122 11123468999999977666542 256777776531 01
Q ss_pred eeEeeC-CCCeEEEEEec-CCCEEEEEEcCC
Q 006743 116 SSCITY-EAPFSSLAFID-DDWILTAGTSNG 144 (633)
Q Consensus 116 v~~i~h-~~~ItsLafSP-dG~~LatGs~DG 144 (633)
...+.. -.....++|+| ++.++++-...+
T Consensus 194 ~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~ 224 (352)
T 2ism_A 194 PEVYSLGHRNPQGLAWHPKTGELFSSEHGPS 224 (352)
T ss_dssp TTEEEECCSEECCCEECTTTCCEEEEEECC-
T ss_pred ccEEEEcCCCcccEEEECCCCCEEEEEcCCC
Confidence 111211 12366789999 666555544333
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.80 E-value=0.54 Score=46.72 Aligned_cols=144 Identities=15% Similarity=0.129 Sum_probs=77.2
Q ss_pred CCCEEEEEECC-----CcEEEEECCCCc---eeEEEeCCC-CCcEEEEEEccCCCeEEEEEeCC-----CeEEEEECCCC
Q 006743 5 KDEHLASISLS-----GDLILHNLASGA---KAAELKDPN-EQVLRVLDYSRNSRHLLVTAGDD-----GTLHLWDTTGR 70 (633)
Q Consensus 5 dG~~LaSgs~D-----G~I~IWDl~tgk---~v~~~~~~~-~~~VssLafSpdg~~lLaSGs~D-----GtI~IWDl~t~ 70 (633)
+++.++.|+.+ ..+.+||+.+.+ -...-.... .....++.+ ++ .+++.|+.+ ..+.+||..+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GD-MIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CC-EEEEEcccCCCcccceEEEEcCCCC
Confidence 45566667654 468999988765 222211111 111122222 44 377777654 36889998776
Q ss_pred CceeEEeccCCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeEee--CC-CCeEEEEEecCCCEEEEEEc
Q 006743 71 SPKVSWLKQHSAPTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCIT--YE-APFSSLAFIDDDWILTAGTS 142 (633)
Q Consensus 71 ~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~D-----GtVrIWDlrtgk~v~~i~--h~-~~ItsLafSPdG~~LatGs~ 142 (633)
+.....-......-.+++.. ++++++.|+.+ ..+.+||+.+.+-...-. .. ....++.+ ++++++.|+.
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 215 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGF 215 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred eEEECCCCCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCC
Confidence 53211111111111122222 57777777765 368999998876543321 11 11222222 5677777776
Q ss_pred C-----CeEEEEECCCC
Q 006743 143 N-----GRVVFYDIRGK 154 (633)
Q Consensus 143 D-----GsV~IWDlrs~ 154 (633)
+ ..|.+||+.+.
T Consensus 216 ~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp CSSSBCCCEEEEETTTT
T ss_pred CCCcccceEEEEeCCCC
Confidence 4 46899999875
No 306
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.78 E-value=0.26 Score=50.63 Aligned_cols=143 Identities=12% Similarity=0.092 Sum_probs=82.0
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec---
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK--- 78 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~--- 78 (633)
+.+++.+++++ .+|.|+.-+-..++.-..+.......+..+.+.+++. ++.++.+|.+++++...++. -..+.
T Consensus 170 ~~~~~~~~~~g-~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~--~~~~~~~G~~~~s~~D~G~t-W~~~~~~~ 245 (327)
T 2xbg_A 170 RSPSGEYVAVS-SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR--LWMIVNGGKIAFSDPDNSEN-WGELLSPL 245 (327)
T ss_dssp ECTTSCEEEEE-TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC--EEEEETTTEEEEEETTEEEE-ECCCBCTT
T ss_pred EcCCCcEEEEE-CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC--EEEEeCCceEEEecCCCCCe-eEeccCCc
Confidence 45666666555 4555544331113333333333445677888988876 44566788888875332210 00011
Q ss_pred -cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee----CCCCeEEEEEecCCCEEEEEEcCCeEEEEEC
Q 006743 79 -QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDI 151 (633)
Q Consensus 79 -~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~----h~~~ItsLafSPdG~~LatGs~DGsV~IWDl 151 (633)
.+...+.++++.+++.+++++. ++.| ++....++.-..+. ....+.++.|.+++ .+++++.+|.|.-++-
T Consensus 246 ~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 246 RRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYVT 320 (327)
T ss_dssp SSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEECC
T ss_pred ccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEcC
Confidence 1224588999998777666554 6766 34444454433332 24568889887554 5667778898887764
No 307
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.77 E-value=0.57 Score=50.95 Aligned_cols=128 Identities=13% Similarity=0.178 Sum_probs=82.4
Q ss_pred ccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC----CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-------
Q 006743 46 SRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH----SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRR------- 114 (633)
Q Consensus 46 Spdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H----~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk------- 114 (633)
+.++.. ++. ..++.||..++.... ..+.+..- -..|..+..+|+|++||..+. ..|.|..+..+.
T Consensus 29 ~~n~t~-i~~-a~~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 29 SQNGTR-IVF-IQDNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp ETTTTE-EEE-EETTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHH
T ss_pred EcCCCE-EEE-EECCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccc
Confidence 344543 333 234788888876333 23333322 236888999999999998864 578998886321
Q ss_pred -----eeeEee-------CCCCeEEEEEecC---CCEEEEEEcCCeEEEEECCC-CCCceEEEee-------cCCCCCee
Q 006743 115 -----PSSCIT-------YEAPFSSLAFIDD---DWILTAGTSNGRVVFYDIRG-KPQPLTVLRA-------CSSSEAVS 171 (633)
Q Consensus 115 -----~v~~i~-------h~~~ItsLafSPd---G~~LatGs~DGsV~IWDlrs-~~k~v~~l~~-------~~H~~~Vt 171 (633)
..+.+. ...+|..+.|+|. +..|++-..|+.|++||+.. ...|. .+.. ......|.
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~ 183 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDIT 183 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEE
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEE
Confidence 011221 2467999999994 57899999999999999986 33344 3321 12225677
Q ss_pred EEEEccC
Q 006743 172 SLCWQRA 178 (633)
Q Consensus 172 sLafsPd 178 (633)
+++|..+
T Consensus 184 S~~Fg~~ 190 (452)
T 3pbp_A 184 DLEFSKD 190 (452)
T ss_dssp EEEECTT
T ss_pred EEEEcCC
Confidence 7787764
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.74 E-value=0.52 Score=49.85 Aligned_cols=161 Identities=14% Similarity=0.183 Sum_probs=95.8
Q ss_pred CCcEEEEECCCC-c---eeEEEeCCCCCcEEEEEEccCCCeEEEEEe-----------------CCCeEEEEECCCCCce
Q 006743 15 SGDLILHNLASG-A---KAAELKDPNEQVLRVLDYSRNSRHLLVTAG-----------------DDGTLHLWDTTGRSPK 73 (633)
Q Consensus 15 DG~I~IWDl~tg-k---~v~~~~~~~~~~VssLafSpdg~~lLaSGs-----------------~DGtI~IWDl~t~~~~ 73 (633)
+..|.+|++... . .+..+.+..-...+++++.++|+ ++++.. ..|.|+.||. .+
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-- 212 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-- 212 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC--
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce--
Confidence 356777766543 2 33445544455678899999987 555543 1244555554 33
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEeCCC-Ccee--eEeeCCCCeEEEEEec-CCCEEEEEEcC-CeEE
Q 006743 74 VSWLKQHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPGS-RRPS--SCITYEAPFSSLAFID-DDWILTAGTSN-GRVV 147 (633)
Q Consensus 74 v~~l~~H~~~VtsLafSPdg~~LaSgS-~DGtVrIWDlrt-gk~v--~~i~h~~~ItsLafSP-dG~~LatGs~D-GsV~ 147 (633)
++.+...-..-+.++|+||++.|+.+. ..+.|+.||+.. +... ..+...+....+++++ +|++.+++..+ +.|.
T Consensus 213 ~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~ 292 (355)
T 3sre_A 213 VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIF 292 (355)
T ss_dssp CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHH
T ss_pred EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEE
Confidence 233333345679999999998877765 567999999863 3322 2334456788899999 59888777655 4566
Q ss_pred EEECCCCCCceEEEeec---CCCCCeeEEEEccCCCeE
Q 006743 148 FYDIRGKPQPLTVLRAC---SSSEAVSSLCWQRAKPVF 182 (633)
Q Consensus 148 IWDlrs~~k~v~~l~~~---~H~~~VtsLafsPdg~~L 182 (633)
.||.... .+..+++.. +....|.++ |..+|+.+
T Consensus 293 ~~~P~~~-~~s~v~rI~~~~~~~~~v~~v-~~ddG~~l 328 (355)
T 3sre_A 293 FYDAENP-PGSEVLRIQDILSEEPKVTVV-YAENGTVL 328 (355)
T ss_dssp SCCTTSC-CCEEEEEEECTTSSSCEEEEE-EEECSSSC
T ss_pred EECCCCC-CCCEEEEEEccCCCCcEEEEE-EEcCCCEE
Confidence 6666531 222222211 123334444 55577654
No 309
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.54 E-value=3.6 Score=45.00 Aligned_cols=167 Identities=14% Similarity=0.142 Sum_probs=103.0
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~ 81 (633)
.||..+.||.-. ...+.|||+++...++.+.- ..+++. -+|-.+. .|+... +..|+-|++.+...+++.+..|.
T Consensus 73 MnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~Vvf-WkWis~~--~l~lVT-~taVyHWsi~~~s~P~kvFdR~~ 146 (494)
T 1bpo_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTF-WKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (494)
T ss_dssp ECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCE-EEEEETT--EEEEEC-SSEEEEEESSSSCCCEEEEECCG
T ss_pred eCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceE-EEecCCC--eEEEEc-CCeeEEecccCCCCchhheecch
Confidence 367777777665 67899999999998888874 344544 4776554 355444 47899999977655566665553
Q ss_pred ----CCeEEEEEcCCCCEEEEEeC-------CCeEEEEeCCCCc------------------------------------
Q 006743 82 ----APTAGISFSSDDKIIASVGL-------DKKLYTYDPGSRR------------------------------------ 114 (633)
Q Consensus 82 ----~~VtsLafSPdg~~LaSgS~-------DGtVrIWDlrtgk------------------------------------ 114 (633)
..|..-..+++.++++..+- .|.+.+|..+.+.
T Consensus 147 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 226 (494)
T 1bpo_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (494)
T ss_dssp GGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCC
T ss_pred hcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 45666666777777664431 1234444432211
Q ss_pred eeeEe---------------------e---CCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCe
Q 006743 115 PSSCI---------------------T---YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAV 170 (633)
Q Consensus 115 ~v~~i---------------------~---h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~V 170 (633)
.++.+ . ..+-..++..++....+..-+.-|.|++||+.++... ..-+ -....|
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i-~~nr--Is~~~i 303 (494)
T 1bpo_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI-YMNR--ISGETI 303 (494)
T ss_dssp EEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE-EEEE--CCSSCE
T ss_pred EEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceee-eeec--ccCCce
Confidence 00000 0 1233456777777788899999999999999998432 2222 334455
Q ss_pred eEEEEcc
Q 006743 171 SSLCWQR 177 (633)
Q Consensus 171 tsLafsP 177 (633)
..-+-+.
T Consensus 304 F~t~~~~ 310 (494)
T 1bpo_A 304 FVTAPHE 310 (494)
T ss_dssp EEEEEET
T ss_pred EEecccC
Confidence 4444443
No 310
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.44 E-value=0.46 Score=49.47 Aligned_cols=182 Identities=13% Similarity=0.144 Sum_probs=93.6
Q ss_pred CccCC---CCEEEEEEC-C-----CcEEEEECCCCc-----ee-EEEe--CCCCCcEEEEEEccCCCeEEEEEeC-----
Q 006743 1 MYNCK---DEHLASISL-S-----GDLILHNLASGA-----KA-AELK--DPNEQVLRVLDYSRNSRHLLVTAGD----- 58 (633)
Q Consensus 1 AFSpd---G~~LaSgs~-D-----G~I~IWDl~tgk-----~v-~~~~--~~~~~~VssLafSpdg~~lLaSGs~----- 58 (633)
+|+|+ +.+|+++.. . +.|..|+...+. .+ ..+. .........|+|.|+|. ++++.+.
T Consensus 81 a~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~ 159 (352)
T 2ism_A 81 ALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERE 159 (352)
T ss_dssp EECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGG
T ss_pred EECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCc
Confidence 36676 555555433 2 678888876432 11 1233 11111224689999996 5555332
Q ss_pred --------CCeEEEEECCCC------------CceeEEeccCCCCeEEEEEcC-CCCEEEEEeCCCe--------EEEEe
Q 006743 59 --------DGTLHLWDTTGR------------SPKVSWLKQHSAPTAGISFSS-DDKIIASVGLDKK--------LYTYD 109 (633)
Q Consensus 59 --------DGtI~IWDl~t~------------~~~v~~l~~H~~~VtsLafSP-dg~~LaSgS~DGt--------VrIWD 109 (633)
.|.|.-++..+. ........+| .....++|+| ++.++++-...+. |.+..
T Consensus 160 ~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~ 238 (352)
T 2ism_A 160 LAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV 238 (352)
T ss_dssp GGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEEC
T ss_pred cccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec
Confidence 256766666541 0111222334 3367889999 6665555433332 33332
Q ss_pred CCC----------------CceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce---EEEeecCCCCCe
Q 006743 110 PGS----------------RRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL---TVLRACSSSEAV 170 (633)
Q Consensus 110 lrt----------------gk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v---~~l~~~~H~~~V 170 (633)
... ..++..+.+......++| .+|..+++.-..+.|...++......+ ...........+
T Consensus 239 ~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp 317 (352)
T 2ism_A 239 PGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRL 317 (352)
T ss_dssp TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCE
T ss_pred cCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCe
Confidence 211 012222223345667777 466666666666788888876543211 011111223678
Q ss_pred eEEEEccCCCeEEEe
Q 006743 171 SSLCWQRAKPVFIDE 185 (633)
Q Consensus 171 tsLafsPdg~~Las~ 185 (633)
..+++.|+|...++.
T Consensus 318 ~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 318 REVQVGPDGALYVTT 332 (352)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred eEEEECCCCcEEEEE
Confidence 999999987655554
No 311
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.35 E-value=3.4 Score=43.56 Aligned_cols=148 Identities=14% Similarity=0.173 Sum_probs=94.2
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~ 81 (633)
.||..+.||.-. ...+.|+|+++...++.+.- ..+++. =+|-... .|+... +..|+-|++.+...+++.+..|.
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~Vvf-WkWis~~--~L~lVT-~taVyHWs~~~~s~P~kvFdR~~ 147 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTF-WKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHS 147 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEE-EEECSSS--EEEEEE-SSEEEEEESSTTCCCEEEEECCG
T ss_pred eCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEE-EEecCCC--eEEEEc-CCcEEEEcccCCCCCceeeecch
Confidence 467788777765 67899999999999888874 344443 5776554 455544 37799999987655566655543
Q ss_pred ----CCeEEEEEcCCCCEEEEEeC---C----CeEEEEeCCCCc------------------------------------
Q 006743 82 ----APTAGISFSSDDKIIASVGL---D----KKLYTYDPGSRR------------------------------------ 114 (633)
Q Consensus 82 ----~~VtsLafSPdg~~LaSgS~---D----GtVrIWDlrtgk------------------------------------ 114 (633)
..|..-+.+++.++++..+- + |.+.+|..+.+.
T Consensus 148 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 227 (365)
T 2xzh_A 148 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 227 (365)
T ss_dssp GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEE
T ss_pred hcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 45666666677776655431 1 334444432211
Q ss_pred eeeEe--e----------------------CCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCC
Q 006743 115 PSSCI--T----------------------YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKP 155 (633)
Q Consensus 115 ~v~~i--~----------------------h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~ 155 (633)
.++.+ + ..+-..++..++....+..-+.-|.|++||+.++.
T Consensus 228 kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 228 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp EEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCc
Confidence 00000 0 12224456667667788888999999999999984
No 312
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.34 E-value=0.55 Score=46.90 Aligned_cols=143 Identities=17% Similarity=0.182 Sum_probs=76.2
Q ss_pred CCCEEEEEECC----CcEEEEECCCCceeEEEeCCC-CCcEEEEEEccCCCeEEEEEeCC------CeEEEEECCCCCce
Q 006743 5 KDEHLASISLS----GDLILHNLASGAKAAELKDPN-EQVLRVLDYSRNSRHLLVTAGDD------GTLHLWDTTGRSPK 73 (633)
Q Consensus 5 dG~~LaSgs~D----G~I~IWDl~tgk~v~~~~~~~-~~~VssLafSpdg~~lLaSGs~D------GtI~IWDl~t~~~~ 73 (633)
+++.++.|+.+ ..+.+||+.+++-...-.... .....++.+ ++. +++.|+.+ ..+.+||..+....
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGK-IYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTE-EEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCE-EEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 45566666654 578899988765432211111 111122222 443 77777765 46899999876532
Q ss_pred eEEeccC--CCCeEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCCceeeEee--CCCCeEEEEEecCCCEEEEE
Q 006743 74 VSWLKQH--SAPTAGISFSSDDKIIASVGL---------DKKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAG 140 (633)
Q Consensus 74 v~~l~~H--~~~VtsLafSPdg~~LaSgS~---------DGtVrIWDlrtgk~v~~i~--h~~~ItsLafSPdG~~LatG 140 (633)
.+... ...-.+++.. ++++++.|+. -..+.+||+.+.+-...-. ....-.+++.. ++++++.|
T Consensus 132 --~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~G 207 (306)
T 3ii7_A 132 --TKPSMLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVG 207 (306)
T ss_dssp --EECCCSSCCBSCEEEEE-TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEC
T ss_pred --eCCCCcCCcceeEEEEE-CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEe
Confidence 12111 1111122222 5667777664 3458899998875443322 11111122222 56777777
Q ss_pred EcC-----CeEEEEECCCC
Q 006743 141 TSN-----GRVVFYDIRGK 154 (633)
Q Consensus 141 s~D-----GsV~IWDlrs~ 154 (633)
+.+ ..|.+||+.+.
T Consensus 208 G~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 208 GQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp CEETTEEBCCEEEEETTTT
T ss_pred CCCCCCCCceEEEeeCCCC
Confidence 654 35899999875
No 313
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.24 E-value=0.65 Score=46.23 Aligned_cols=142 Identities=11% Similarity=0.108 Sum_probs=75.0
Q ss_pred CCCEEEEEECC-----CcEEEEECCCCceeEEEeCCC-CCcEEEEEEccCCCeEEEEEeCCC-----eEEEEECCCCCce
Q 006743 5 KDEHLASISLS-----GDLILHNLASGAKAAELKDPN-EQVLRVLDYSRNSRHLLVTAGDDG-----TLHLWDTTGRSPK 73 (633)
Q Consensus 5 dG~~LaSgs~D-----G~I~IWDl~tgk~v~~~~~~~-~~~VssLafSpdg~~lLaSGs~DG-----tI~IWDl~t~~~~ 73 (633)
+++.++.|+.+ ..+.+||..+.+-...-.... .....++.+ ++ .+++.|+.++ .+.+||..+....
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NG-LLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CC-EEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 45556666644 358889987765332211111 111122222 34 3777777653 5888998776532
Q ss_pred eEEecc--CCCCeEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCceeeEee--CC-CCeEEEEEecCCCEEEEEE
Q 006743 74 VSWLKQ--HSAPTAGISFSSDDKIIASVGLD-------KKLYTYDPGSRRPSSCIT--YE-APFSSLAFIDDDWILTAGT 141 (633)
Q Consensus 74 v~~l~~--H~~~VtsLafSPdg~~LaSgS~D-------GtVrIWDlrtgk~v~~i~--h~-~~ItsLafSPdG~~LatGs 141 (633)
.+.. ....-.+++.. ++++++.|+.+ ..+.+||+.+.+-...-. .. ....++.+ ++++++.|+
T Consensus 138 --~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 212 (302)
T 2xn4_A 138 --HVAPMNTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGG 212 (302)
T ss_dssp --EECCCSSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred --ecCCCCCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECC
Confidence 2211 11111122222 56677776643 358999998875443321 11 11222222 567777877
Q ss_pred cC-----CeEEEEECCCC
Q 006743 142 SN-----GRVVFYDIRGK 154 (633)
Q Consensus 142 ~D-----GsV~IWDlrs~ 154 (633)
.+ ..|.+||+.+.
T Consensus 213 ~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 213 HDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp BSSSSBCCCEEEEETTTT
T ss_pred CCCCcccceEEEEeCCCC
Confidence 65 36899999875
No 314
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.91 E-value=2.6 Score=43.87 Aligned_cols=143 Identities=15% Similarity=0.206 Sum_probs=78.8
Q ss_pred EEEEEccCCCeEEEEEeC-------------CCeEEEEECCCCC-------ceeEEeccCCCCeEEEEEcC-CCCEEEEE
Q 006743 41 RVLDYSRNSRHLLVTAGD-------------DGTLHLWDTTGRS-------PKVSWLKQHSAPTAGISFSS-DDKIIASV 99 (633)
Q Consensus 41 ssLafSpdg~~lLaSGs~-------------DGtI~IWDl~t~~-------~~v~~l~~H~~~VtsLafSP-dg~~LaSg 99 (633)
..|+|.|+|. ++++.+. .|.|..++..+.- .......+|. ....++|+| +++++++-
T Consensus 138 ~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 138 GRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp CCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEE
T ss_pred ceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEe
Confidence 4589999997 5555332 2566666665430 0112233443 357899999 66655553
Q ss_pred eCCC---eEEEEeCCC--------C--------ceeeEe-eCCCCeEEEEEe-------cCCCEEEEEEcCCeEEEEECC
Q 006743 100 GLDK---KLYTYDPGS--------R--------RPSSCI-TYEAPFSSLAFI-------DDDWILTAGTSNGRVVFYDIR 152 (633)
Q Consensus 100 S~DG---tVrIWDlrt--------g--------k~v~~i-~h~~~ItsLafS-------PdG~~LatGs~DGsV~IWDlr 152 (633)
...+ .|.+..... + .++..+ ........++|. .+|.++++.-..+.|...++.
T Consensus 216 ~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~ 295 (354)
T 3a9g_A 216 HGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFG 295 (354)
T ss_dssp CCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEEC
T ss_pred cCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEEC
Confidence 3222 244332211 0 122222 223467788883 467777766667889998887
Q ss_pred CCCCceEEEeec-CCCCCeeEEEEccCCCeEEEe
Q 006743 153 GKPQPLTVLRAC-SSSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 153 s~~k~v~~l~~~-~H~~~VtsLafsPdg~~Las~ 185 (633)
............ +....+..+++.|+|...++.
T Consensus 296 ~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 296 DNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp GGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred CCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 532222111111 224678999999987555443
No 315
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.50 E-value=1.9 Score=44.21 Aligned_cols=161 Identities=12% Similarity=0.107 Sum_probs=94.3
Q ss_pred ccCCCCEEEEEE--CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCC-------------CeEEEEE
Q 006743 2 YNCKDEHLASIS--LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD-------------GTLHLWD 66 (633)
Q Consensus 2 FSpdG~~LaSgs--~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~D-------------GtI~IWD 66 (633)
|+.+|++|+... .++.|+..+. +|.....+.. .. +--++++++.+.++...+ ..|+..+
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~-dg~~~~~l~~---~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~ 94 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNI-DGSNIHKLSN---DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIK 94 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEET-TSCSCEEEEE---EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEE
T ss_pred EEEeCCEEEEEeCCCCceEEEEcC-CCCCCEEccC---Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEe
Confidence 455677776654 2566777775 4444444442 12 235688888666665544 4678888
Q ss_pred CCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEe----CCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEEEEEc
Q 006743 67 TTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVG----LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTS 142 (633)
Q Consensus 67 l~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS----~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~LatGs~ 142 (633)
+.+.+. ..+... . +..|++++++|+-.. .+..|+..++.......+..+.. ..++++++.|+-.+.
T Consensus 95 ~dg~~~--~~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 95 RNGHGS--TVLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNP 164 (302)
T ss_dssp TTSCCC--EEEECS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECT
T ss_pred CCCCcc--eEeecC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeC
Confidence 877762 233222 1 236777888888776 34467777877554444444332 456778888886654
Q ss_pred -CCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006743 143 -NGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (633)
Q Consensus 143 -DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~ 185 (633)
...|++.++....+ +.+. . +... ..+.|++.+|+..
T Consensus 165 g~~~Iy~~~l~g~~~--~~l~--~--~~~~-~~~~P~g~~iy~t 201 (302)
T 3s25_A 165 KNGQLYRYDTASQSE--ALFY--D--CNCY-KPVVLDDTNVYYM 201 (302)
T ss_dssp TTCCEEEEETTTTEE--EEEE--C--SCEE-EEEEEETTEEEEE
T ss_pred CCceEEEEECCCCCE--EEEe--C--CCcc-ceeeecCCEEEEE
Confidence 67788888876532 2222 1 2222 3456887777655
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.44 E-value=0.56 Score=46.61 Aligned_cols=141 Identities=9% Similarity=0.025 Sum_probs=76.7
Q ss_pred CCCEEEEEECC-----CcEEEEECCCCceeEEEeCCC-CCcEEEEEEccCCCeEEEEEeCC-----CeEEEEECCCCCce
Q 006743 5 KDEHLASISLS-----GDLILHNLASGAKAAELKDPN-EQVLRVLDYSRNSRHLLVTAGDD-----GTLHLWDTTGRSPK 73 (633)
Q Consensus 5 dG~~LaSgs~D-----G~I~IWDl~tgk~v~~~~~~~-~~~VssLafSpdg~~lLaSGs~D-----GtI~IWDl~t~~~~ 73 (633)
+++.++.|+.+ ..+.+||+.+.+-...-.... .....++.+ ++. +++.|+.+ ..+.+||..+....
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W~ 188 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGV-IYCLGGYDGLNILNSVEKYDPHTGHWT 188 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCE-EEEECCCCCCcccceEEEEeCCCCcEE
Confidence 45556666543 368899987765332211111 111122222 444 77777755 45899999876532
Q ss_pred eEEeccCC--C-CeEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeEee--CC-CCeEEEEEecCCCEEEEEEc
Q 006743 74 VSWLKQHS--A-PTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCIT--YE-APFSSLAFIDDDWILTAGTS 142 (633)
Q Consensus 74 v~~l~~H~--~-~VtsLafSPdg~~LaSgS~D-----GtVrIWDlrtgk~v~~i~--h~-~~ItsLafSPdG~~LatGs~ 142 (633)
.+.... . ...++.+ ++++++.|+.+ ..|.+||+.+.+-...-. .. ....++.+ ++++++.|+.
T Consensus 189 --~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 262 (301)
T 2vpj_A 189 --NVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGY 262 (301)
T ss_dssp --EECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred --eCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCc
Confidence 221111 1 1122222 56777777764 468999998876543321 11 11222222 6777777776
Q ss_pred C-----CeEEEEECCCC
Q 006743 143 N-----GRVVFYDIRGK 154 (633)
Q Consensus 143 D-----GsV~IWDlrs~ 154 (633)
+ ..|.+||+++.
T Consensus 263 ~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 263 DGNSLLSSIECYDPIID 279 (301)
T ss_dssp CSSSBEEEEEEEETTTT
T ss_pred CCCcccccEEEEcCCCC
Confidence 5 35888998875
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.33 E-value=0.58 Score=46.62 Aligned_cols=145 Identities=16% Similarity=0.137 Sum_probs=76.0
Q ss_pred CCCEEEEEECCC-----cEEEEECCCCceeEEEeCCC-CCcEEEEEEccCCCeEEEEEeCC-------CeEEEEECCCCC
Q 006743 5 KDEHLASISLSG-----DLILHNLASGAKAAELKDPN-EQVLRVLDYSRNSRHLLVTAGDD-------GTLHLWDTTGRS 71 (633)
Q Consensus 5 dG~~LaSgs~DG-----~I~IWDl~tgk~v~~~~~~~-~~~VssLafSpdg~~lLaSGs~D-------GtI~IWDl~t~~ 71 (633)
+++.++.|+.++ .+.+||+.+.+-...-.... .....++.+ ++. +++.|+.+ ..+.+||..+..
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGL-LYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEECCEETTTTEECCCEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCE-EEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 456666777553 57888987765332211111 111122222 343 67776643 358899998765
Q ss_pred ceeEEeccCCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeEeeC--CCCeEEEEEecCCCEEEEEEcCC
Q 006743 72 PKVSWLKQHSAPTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCITY--EAPFSSLAFIDDDWILTAGTSNG 144 (633)
Q Consensus 72 ~~v~~l~~H~~~VtsLafSPdg~~LaSgS~D-----GtVrIWDlrtgk~v~~i~h--~~~ItsLafSPdG~~LatGs~DG 144 (633)
.....-......-.+++.. ++++++.|+.+ ..+.+||+.+.+-...-.. ...-.+++. -++++++.|+.++
T Consensus 185 W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~ 262 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDG 262 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCS
T ss_pred EEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCC
Confidence 3211100111111122222 57777787764 3699999988754433221 111111222 2677777887654
Q ss_pred -----eEEEEECCCC
Q 006743 145 -----RVVFYDIRGK 154 (633)
Q Consensus 145 -----sV~IWDlrs~ 154 (633)
.|.+||+.+.
T Consensus 263 ~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 263 SCNLASVEYYNPTTD 277 (302)
T ss_dssp SSBCCCEEEEETTTT
T ss_pred CcccccEEEEcCCCC
Confidence 4889998875
No 318
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.32 E-value=1 Score=47.04 Aligned_cols=143 Identities=14% Similarity=0.216 Sum_probs=82.4
Q ss_pred CcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe---ccCCCCeEEEEEcCC---CCEEEEEeC----C----C
Q 006743 38 QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL---KQHSAPTAGISFSSD---DKIIASVGL----D----K 103 (633)
Q Consensus 38 ~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l---~~H~~~VtsLafSPd---g~~LaSgS~----D----G 103 (633)
.....|+|.|+++ |+.+..+|.|+++|.... ..+..+ .........|+|+|+ +..|+++.. + .
T Consensus 29 ~~P~~ia~~pdG~--l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGR--YLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTE--EEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCe--EEEEeCCCEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 3456799999986 555567799999974332 122221 122356899999997 455554433 3 5
Q ss_pred eEEEEeCCCC--c---eeeE---ee--CCCCeEEEEEecCCCEEEEEEc-------------CCeEEEEECCCCC---C-
Q 006743 104 KLYTYDPGSR--R---PSSC---IT--YEAPFSSLAFIDDDWILTAGTS-------------NGRVVFYDIRGKP---Q- 156 (633)
Q Consensus 104 tVrIWDlrtg--k---~v~~---i~--h~~~ItsLafSPdG~~LatGs~-------------DGsV~IWDlrs~~---k- 156 (633)
.|..|+.... . .... +. .......|+|.|||.+.++.+. .|.|.-+|....- .
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 6888887654 1 1111 22 1223567999999986665432 2567767665420 0
Q ss_pred --ceEEEeecCCCCCeeEEEEcc-CCCeEEEe
Q 006743 157 --PLTVLRACSSSEAVSSLCWQR-AKPVFIDE 185 (633)
Q Consensus 157 --~v~~l~~~~H~~~VtsLafsP-dg~~Las~ 185 (633)
...++. .++. ....++|+| ++...++.
T Consensus 186 f~~~~i~a-~G~r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 186 FPNSPIWS-YGHR-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp STTCCEEE-ECCS-CCCEEEECTTTCCEEEEE
T ss_pred CCCCcEEE-EccC-CcceEEEeCCCCCEEEEe
Confidence 012221 2443 356799999 56655554
No 319
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.27 E-value=1.1 Score=44.80 Aligned_cols=135 Identities=10% Similarity=0.055 Sum_probs=81.2
Q ss_pred CCEEEEEECCCcEEEEECCCCc------eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006743 6 DEHLASISLSGDLILHNLASGA------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 6 G~~LaSgs~DG~I~IWDl~tgk------~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~ 79 (633)
...|++...| +|++=...++. ....+-...-..+.+++|+|++. +.++ .+|.++-.+..+... ..+.+
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~--~~W~~ 77 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDN--DNWMG 77 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTT--CCHHH
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCCc--ccccc
Confidence 3456666777 66665555544 22333321123566899999887 4444 778776666544221 11111
Q ss_pred CCCCe--------EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee------Eee--CCCCeEEEEEecCCCEEEEEEcC
Q 006743 80 HSAPT--------AGISFSSDDKIIASVGLDKKLYTYDPGSRRPSS------CIT--YEAPFSSLAFIDDDWILTAGTSN 143 (633)
Q Consensus 80 H~~~V--------tsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~------~i~--h~~~ItsLafSPdG~~LatGs~D 143 (633)
-...| .++.|.|++.+.++ .||.|+-++.-+..... .+. .=..+.+|.+.|+|.+.++. |
T Consensus 78 s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--d 153 (236)
T 1tl2_A 78 RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--G 153 (236)
T ss_dssp HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--T
T ss_pred cccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--C
Confidence 12223 77889999988877 56999888864422211 111 11457999999999887777 7
Q ss_pred CeEEEEE
Q 006743 144 GRVVFYD 150 (633)
Q Consensus 144 GsV~IWD 150 (633)
+.++-+.
T Consensus 154 g~lyr~~ 160 (236)
T 1tl2_A 154 QQFYKAL 160 (236)
T ss_dssp TEEEEEC
T ss_pred CcEEecC
Confidence 8765433
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.10 E-value=1.5 Score=47.67 Aligned_cols=101 Identities=10% Similarity=0.185 Sum_probs=57.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeE--EEeCC-----CCCcEEEEEEccC---CCeEEEEEeC------------
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAA--ELKDP-----NEQVLRVLDYSRN---SRHLLVTAGD------------ 58 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~--~~~~~-----~~~~VssLafSpd---g~~lLaSGs~------------ 58 (633)
+|.|+|+++++--..+.|++++..+++... .+... ....+..|+|+|+ +..++++-+.
T Consensus 33 a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~ 112 (454)
T 1cru_A 33 LWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPN 112 (454)
T ss_dssp EECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCE
T ss_pred EEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcccccc
Confidence 477899866654333479988865555322 22210 1344567999995 5434444432
Q ss_pred CCeEEEEECCCCC-------ceeEEec-cCCCCeEEEEEcCCCCEEEEEeC
Q 006743 59 DGTLHLWDTTGRS-------PKVSWLK-QHSAPTAGISFSSDDKIIASVGL 101 (633)
Q Consensus 59 DGtI~IWDl~t~~-------~~v~~l~-~H~~~VtsLafSPdg~~LaSgS~ 101 (633)
...|.-|+..... ..+..+. ........|+|.|||+++++.+.
T Consensus 113 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 113 QTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 2356666654321 1111121 12235789999999998877664
No 321
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.98 E-value=13 Score=45.06 Aligned_cols=147 Identities=12% Similarity=0.072 Sum_probs=90.3
Q ss_pred ccCCCCEEEEEECC---------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc
Q 006743 2 YNCKDEHLASISLS---------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (633)
Q Consensus 2 FSpdG~~LaSgs~D---------G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~ 72 (633)
|..+...|+++... ..|++.+......+.......+..|...+.+ +. .++.+. ++.+.++++..+..
T Consensus 469 f~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~-~vvva~-g~~l~~fel~~~~L 544 (1158)
T 3ei3_A 469 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCN--SS-QVVVAV-GRALYYLQIHPQEL 544 (1158)
T ss_dssp CCSSSCEEEEEEETTTEEEEEESSCEEEEESSSCCEEEEECCTTCCCCCEEEEC--SS-EEEEEE-TTEEEEEEEETTEE
T ss_pred ccCCCCcEEEEEcCCCeEEEEecCEEEEEECCCCeEEEEEECCCCCEEEEEEeC--CC-EEEEEE-CCEEEEEEeeCCce
Confidence 34455566665432 2356666555555656654444445444444 33 455544 67888888765432
Q ss_pred eeEEeccCCCCeEEEEEcCC------CCEEEEEeC-CCeEEEEeCCCCceeeEeeC--CCCeEEEEEec--CCCEEEEEE
Q 006743 73 KVSWLKQHSAPTAGISFSSD------DKIIASVGL-DKKLYTYDPGSRRPSSCITY--EAPFSSLAFID--DDWILTAGT 141 (633)
Q Consensus 73 ~v~~l~~H~~~VtsLafSPd------g~~LaSgS~-DGtVrIWDlrtgk~v~~i~h--~~~ItsLafSP--dG~~LatGs 141 (633)
....-..-...|.|+++.+. .+++++|.. |++|+|+++.+.+.+..... .....++++.. ...+|.+|-
T Consensus 545 ~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl 624 (1158)
T 3ei3_A 545 RQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCAL 624 (1158)
T ss_dssp EEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEE
T ss_pred eeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEe
Confidence 21122234568999999862 478999997 99999999987666654433 33555555543 345788999
Q ss_pred cCCeEEEEECC
Q 006743 142 SNGRVVFYDIR 152 (633)
Q Consensus 142 ~DGsV~IWDlr 152 (633)
.||.+.-+.+.
T Consensus 625 ~dG~l~~~~~d 635 (1158)
T 3ei3_A 625 GDGALFYFGLN 635 (1158)
T ss_dssp TTSEEEEEEEC
T ss_pred CCCeEEEEEEc
Confidence 99997666554
No 322
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.84 E-value=0.71 Score=48.10 Aligned_cols=111 Identities=12% Similarity=0.113 Sum_probs=61.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEe------CCCCCcEEEEEEccC---CCeEEEEEeC-------CCeEEE
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELK------DPNEQVLRVLDYSRN---SRHLLVTAGD-------DGTLHL 64 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~------~~~~~~VssLafSpd---g~~lLaSGs~-------DGtI~I 64 (633)
+|.|+|++|+++...|.|++++. +++....+. .........|+|+|+ +..++++-.. ...|..
T Consensus 24 ~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r 102 (353)
T 2g8s_A 24 AFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGY 102 (353)
T ss_dssp EECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEE
T ss_pred EEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEE
Confidence 47899984555667899999985 443221111 111234577999996 4434444332 235777
Q ss_pred EECCCCCce---eE-Eecc------CCCCeEEEEEcCCCCEEEEEeCC-------------CeEEEEeCCC
Q 006743 65 WDTTGRSPK---VS-WLKQ------HSAPTAGISFSSDDKIIASVGLD-------------KKLYTYDPGS 112 (633)
Q Consensus 65 WDl~t~~~~---v~-~l~~------H~~~VtsLafSPdg~~LaSgS~D-------------GtVrIWDlrt 112 (633)
|+....... .. .+.. .......|+|.|||.++++.+.. +.|.-+|...
T Consensus 103 ~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 103 GRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp EEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred EEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 776543110 11 1111 11224679999999766665432 4677777653
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.76 E-value=1.4 Score=44.24 Aligned_cols=143 Identities=13% Similarity=0.125 Sum_probs=74.9
Q ss_pred CCCCEEEEEEC----C-------CcEEEEECCCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCC--------CeEE
Q 006743 4 CKDEHLASISL----S-------GDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDD--------GTLH 63 (633)
Q Consensus 4 pdG~~LaSgs~----D-------G~I~IWDl~tgk~v~~~~~-~~~~~VssLafSpdg~~lLaSGs~D--------GtI~ 63 (633)
.+++.++.|+. + ..+.+||..+++-.. +.. .....-.+++.. ++ .+++.|+.+ ..+.
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~ 120 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MPPLPSPRCLFGLGEA-LN-SIYVVGGREIKDGERCLDSVM 120 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CCCBSSCEESCEEEEE-TT-EEEEECCEESSTTCCBCCCEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CCCCCcchhceeEEEE-CC-EEEEEeCCcCCCCCcccceEE
Confidence 35677777773 1 127788987765322 111 011000111222 33 477777743 4589
Q ss_pred EEECCCCCceeEEeccC--CCCeEEEEEcCCCCEEEEEeC-C-----CeEEEEeCCCCceeeEee--CC-CCeEEEEEec
Q 006743 64 LWDTTGRSPKVSWLKQH--SAPTAGISFSSDDKIIASVGL-D-----KKLYTYDPGSRRPSSCIT--YE-APFSSLAFID 132 (633)
Q Consensus 64 IWDl~t~~~~v~~l~~H--~~~VtsLafSPdg~~LaSgS~-D-----GtVrIWDlrtgk~v~~i~--h~-~~ItsLafSP 132 (633)
+||..+.+. ..+... ...-.+++. -++++++.|+. + ..+.+||+.+.+-...-. .. ....++.+
T Consensus 121 ~~d~~~~~W--~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 195 (315)
T 4asc_A 121 CYDRLSFKW--GESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-- 195 (315)
T ss_dssp EEETTTTEE--EECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--
T ss_pred EECCCCCcE--eECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--
Confidence 999987652 112111 111112222 25677777776 2 369999998765433221 11 11222222
Q ss_pred CCCEEEEEEcCC-----eEEEEECCCC
Q 006743 133 DDWILTAGTSNG-----RVVFYDIRGK 154 (633)
Q Consensus 133 dG~~LatGs~DG-----sV~IWDlrs~ 154 (633)
++++++.|+.++ .+.+||+.+.
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCEEEEEeccCCCCccceEEEEECCCC
Confidence 677788887654 5889999875
No 324
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.73 E-value=1.6 Score=49.91 Aligned_cols=148 Identities=10% Similarity=0.141 Sum_probs=83.6
Q ss_pred CCCEEEEEECC----CcEEEEECCCCceeEEE-e-----CCCCCcEEEEEEcc-CCCeEEEEEeCCC------eEEEEEC
Q 006743 5 KDEHLASISLS----GDLILHNLASGAKAAEL-K-----DPNEQVLRVLDYSR-NSRHLLVTAGDDG------TLHLWDT 67 (633)
Q Consensus 5 dG~~LaSgs~D----G~I~IWDl~tgk~v~~~-~-----~~~~~~VssLafSp-dg~~lLaSGs~DG------tI~IWDl 67 (633)
++..++.||.+ ..+.+||..+++....- . ......-.+++... ++. +++.|+.++ .+.+||.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~-lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQ-LLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTE-EEEECCBSSTTCBCCCCEEEET
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCE-EEEEcCCCCCCCccccEEEEeC
Confidence 45666677643 46889998877644322 1 11111112233333 454 777777543 5889998
Q ss_pred CCCCceeEEecc--CCCCeEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCceeeEee------CCCCeEEEEEecC-CCE
Q 006743 68 TGRSPKVSWLKQ--HSAPTAGISFSSDDKIIASVGLDK--KLYTYDPGSRRPSSCIT------YEAPFSSLAFIDD-DWI 136 (633)
Q Consensus 68 ~t~~~~v~~l~~--H~~~VtsLafSPdg~~LaSgS~DG--tVrIWDlrtgk~v~~i~------h~~~ItsLafSPd-G~~ 136 (633)
.+.... .+.. ....-.+++...++++++.|+.++ .+.+||+.+..-..... ......++.+..+ +++
T Consensus 476 ~t~~W~--~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREWS--MIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEEE--ECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcEE--ECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 875521 1111 111112333323788888888765 69999998865433221 1222334555655 667
Q ss_pred EEEEEc--C-----CeEEEEECCCCC
Q 006743 137 LTAGTS--N-----GRVVFYDIRGKP 155 (633)
Q Consensus 137 LatGs~--D-----GsV~IWDlrs~~ 155 (633)
++.|+. + ..|.+||+.+..
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCc
Confidence 777776 2 458999998764
No 325
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.45 E-value=1.6 Score=45.88 Aligned_cols=100 Identities=14% Similarity=0.080 Sum_probs=58.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeE--EEe---CCCCCcEEEEEEccC---CCeEEEEE--eCCCeEEEEECCCC
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAKAA--ELK---DPNEQVLRVLDYSRN---SRHLLVTA--GDDGTLHLWDTTGR 70 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~v~--~~~---~~~~~~VssLafSpd---g~~lLaSG--s~DGtI~IWDl~t~ 70 (633)
+|.|||+++++--..|.|++++..+++... .+. .........|+++|+ +..++++- ..++.|.-|.....
T Consensus 38 a~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~ 117 (347)
T 3das_A 38 APLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEK 117 (347)
T ss_dssp EECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTT
T ss_pred EEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCC
Confidence 478999877665448999999876555322 121 112345678999985 33233332 24566777776541
Q ss_pred C----------ceeEEec-cCCCCeEEEEEcCCCCEEEEEe
Q 006743 71 S----------PKVSWLK-QHSAPTAGISFSSDDKIIASVG 100 (633)
Q Consensus 71 ~----------~~v~~l~-~H~~~VtsLafSPdg~~LaSgS 100 (633)
. .++..+. ........|+|.|||.++++.+
T Consensus 118 ~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 118 KPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp SCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 1 1111121 1122356799999998877765
No 326
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.39 E-value=3.7 Score=40.69 Aligned_cols=141 Identities=11% Similarity=0.027 Sum_probs=74.8
Q ss_pred EEEEEEC--CCcEEEEECCCCceeEE--EeCCCCCcEEEEEEccCCCeEEEEEeCC----CeEEEEECCCCCceeEEecc
Q 006743 8 HLASISL--SGDLILHNLASGAKAAE--LKDPNEQVLRVLDYSRNSRHLLVTAGDD----GTLHLWDTTGRSPKVSWLKQ 79 (633)
Q Consensus 8 ~LaSgs~--DG~I~IWDl~tgk~v~~--~~~~~~~~VssLafSpdg~~lLaSGs~D----GtI~IWDl~t~~~~v~~l~~ 79 (633)
.++.|+. ...+.+||..+++-... +... .....++. -++ .+++.|+.+ ..+.+||..+.......-..
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~--~~~-~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEK-RRDAACVF--WDN-VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCC-CBSCEEEE--ETT-EEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcc-cceeEEEE--ECC-EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 4555654 35799999887653321 1111 11112222 244 377777765 67899999876532111111
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceeeEee--CCCCeEEEEEecCCCEEEEEEc---------
Q 006743 80 HSAPTAGISFSSDDKIIASVGLD------KKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAGTS--------- 142 (633)
Q Consensus 80 H~~~VtsLafSPdg~~LaSgS~D------GtVrIWDlrtgk~v~~i~--h~~~ItsLafSPdG~~LatGs~--------- 142 (633)
....-.+++.. ++++++.|+.+ ..+.+||+.+.+-...-. ....-.+++. -++++++.|+.
T Consensus 90 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 90 TPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp SCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEE
T ss_pred ccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccc
Confidence 11111122222 57777888765 468999998876443321 1111112222 25666677664
Q ss_pred CCeEEEEECCCC
Q 006743 143 NGRVVFYDIRGK 154 (633)
Q Consensus 143 DGsV~IWDlrs~ 154 (633)
-..+.+||+.+.
T Consensus 168 ~~~~~~yd~~~~ 179 (306)
T 3ii7_A 168 LNSCEVYDPATE 179 (306)
T ss_dssp CCCEEEEETTTT
T ss_pred cceEEEeCCCCC
Confidence 345889999876
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.37 E-value=1.2 Score=44.58 Aligned_cols=140 Identities=12% Similarity=0.084 Sum_probs=74.4
Q ss_pred CCCEEEEEEC----C-----CcEEEEECCCCceeEE--EeCCCCCcEEEEEEccCCCeEEEEEeCC-----CeEEEEECC
Q 006743 5 KDEHLASISL----S-----GDLILHNLASGAKAAE--LKDPNEQVLRVLDYSRNSRHLLVTAGDD-----GTLHLWDTT 68 (633)
Q Consensus 5 dG~~LaSgs~----D-----G~I~IWDl~tgk~v~~--~~~~~~~~VssLafSpdg~~lLaSGs~D-----GtI~IWDl~ 68 (633)
+++.++.|+. + ..+.+||+.+.+-... +... .....++.+ ++. +++.|+.+ ..+.+||..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP-RNRIGVGVI--DGH-IYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC-CBTCEEEEE--TTE-EEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC-ccccEEEEE--CCE-EEEEcCCCCCcccccEEEECCC
Confidence 3455555654 2 4688899877643221 1111 111122222 444 67776643 368899987
Q ss_pred CCCceeEEeccC---CCCeEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeEee--CC-CCeEEEEEecCCCEE
Q 006743 69 GRSPKVSWLKQH---SAPTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCIT--YE-APFSSLAFIDDDWIL 137 (633)
Q Consensus 69 t~~~~v~~l~~H---~~~VtsLafSPdg~~LaSgS~D-----GtVrIWDlrtgk~v~~i~--h~-~~ItsLafSPdG~~L 137 (633)
+... ..+... ...-.++.+ ++++++.|+.+ ..+.+||+.+.+-...-. .. ....++.+ +++++
T Consensus 146 ~~~W--~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iy 219 (308)
T 1zgk_A 146 RDEW--HLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIY 219 (308)
T ss_dssp TTEE--EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEE
T ss_pred CCeE--eECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEE
Confidence 7652 111111 111122222 57777777765 468999998765433221 11 11222222 67777
Q ss_pred EEEEcC-----CeEEEEECCCC
Q 006743 138 TAGTSN-----GRVVFYDIRGK 154 (633)
Q Consensus 138 atGs~D-----GsV~IWDlrs~ 154 (633)
+.|+.+ ..|.+||+.+.
T Consensus 220 v~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 220 AAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp EECCBCSSSBCCCEEEEETTTT
T ss_pred EEeCCCCCCccceEEEEeCCCC
Confidence 777765 45999999875
No 328
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.22 E-value=13 Score=42.04 Aligned_cols=161 Identities=14% Similarity=0.097 Sum_probs=91.7
Q ss_pred EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-----cCCC
Q 006743 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-----QHSA 82 (633)
Q Consensus 8 ~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~-----~H~~ 82 (633)
.|..|+.+| +..||..+.+... ........|.++.. .++ .|..+..+ -|..||..+.. ...+. ....
T Consensus 75 ~lWigT~~G-l~~yd~~~~~f~~-~~~~~~~~i~~i~~-~~g--~lWigt~~-Gl~~~~~~~~~--~~~~~~~~~~l~~~ 146 (758)
T 3ott_A 75 YLYMGTDNG-ILVYNYRADRYEQ-PETDFPTDVRTMAL-QGD--TLWLGALN-GLYTYQLQSRK--LTSFDTRRNGLPNN 146 (758)
T ss_dssp EEEEEETTE-EEEEETTTTEECC-CSCCCCSCEEEEEE-ETT--EEEEEETT-EEEEEETTTCC--EEEECHHHHCCSCS
T ss_pred cEEEEeCCC-eEEEeCCCCEEEC-cccCCCceEEEEEe-cCC--cEEEEcCC-cceeEeCCCCe--EEEeccCCCCcCCC
Confidence 455666554 7888877653322 11111234666543 344 36666665 68889987655 22221 1235
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEe-e-----CCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC
Q 006743 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-T-----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (633)
Q Consensus 83 ~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i-~-----h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k 156 (633)
.|.++....++.+.+ ++.+ -|..||..+++..... . ....|.++....++..|.+|+. +-|..||..+..
T Consensus 147 ~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~- 222 (758)
T 3ott_A 147 TIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ- 222 (758)
T ss_dssp CEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTE-
T ss_pred eEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe-
Confidence 688888887777655 4544 4888898776543221 1 1234888888887776666664 458889987642
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeE
Q 006743 157 PLTVLRACSSSEAVSSLCWQRAKPVF 182 (633)
Q Consensus 157 ~v~~l~~~~H~~~VtsLafsPdg~~L 182 (633)
+..+... ....|.++..+.+|.+.
T Consensus 223 -~~~~~~l-~~~~i~~i~~d~~g~lW 246 (758)
T 3ott_A 223 -IKQTEAF-HNNSIKSLALDGNGDLL 246 (758)
T ss_dssp -EEEEEEE-EEEEEEEEEECTTCCEE
T ss_pred -EEeccCC-CCCeEEEEEEcCCCCEE
Confidence 1112111 12346667666544433
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.91 E-value=2.9 Score=41.88 Aligned_cols=143 Identities=13% Similarity=0.166 Sum_probs=73.0
Q ss_pred CCCCEEEEEEC----CC-------cEEEEECCCCceeEE--EeCCCCCcEEEEEEccCCCeEEEEEeCC-------CeEE
Q 006743 4 CKDEHLASISL----SG-------DLILHNLASGAKAAE--LKDPNEQVLRVLDYSRNSRHLLVTAGDD-------GTLH 63 (633)
Q Consensus 4 pdG~~LaSgs~----DG-------~I~IWDl~tgk~v~~--~~~~~~~~VssLafSpdg~~lLaSGs~D-------GtI~ 63 (633)
.+++.++.|+. ++ .+.+||..+.+-... +... .....++.+ ++ .+++.|+.+ ..+.
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA-RCLFGLGEV--DD-KIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC-BCSCEEEEE--TT-EEEEEEEEBTTTCCEEEEEE
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc-ccccceEEE--CC-EEEEEcCccCCCCcccceEE
Confidence 35666777763 12 177888876553221 1111 111111222 34 477777754 3588
Q ss_pred EEECCCCCceeEEeccCCCCe--EEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceeeEee--CCCCeEEEEEecC
Q 006743 64 LWDTTGRSPKVSWLKQHSAPT--AGISFSSDDKIIASVGLD------KKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDD 133 (633)
Q Consensus 64 IWDl~t~~~~v~~l~~H~~~V--tsLafSPdg~~LaSgS~D------GtVrIWDlrtgk~v~~i~--h~~~ItsLafSPd 133 (633)
+||..+.+.. .+.....+. .+++. .++++++.|+.+ ..+.+||+.+.+-...-. ......+++. -+
T Consensus 131 ~yd~~~~~W~--~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~ 206 (318)
T 2woz_A 131 CYDPVAAKWS--EVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HK 206 (318)
T ss_dssp EEETTTTEEE--EECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ET
T ss_pred EEeCCCCCEe--ECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-EC
Confidence 8998776532 221111111 11222 356777777642 359999998875443321 1111112222 25
Q ss_pred CCEEEEEEcC-----CeEEEEECCCC
Q 006743 134 DWILTAGTSN-----GRVVFYDIRGK 154 (633)
Q Consensus 134 G~~LatGs~D-----GsV~IWDlrs~ 154 (633)
+++++.|+.+ ..|.+||+.+.
T Consensus 207 ~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 207 GKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp TEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CEEEEEcCcCCCCccceEEEEECCCC
Confidence 6777777654 35788998875
No 330
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.90 E-value=4.4 Score=40.49 Aligned_cols=139 Identities=13% Similarity=0.113 Sum_probs=72.5
Q ss_pred EEEEEECCCcEEEEECCCCceeE-EEeCCCCCcEEEEEEccCCCeEEEEEeC-----C------CeEEEEECCCCCceeE
Q 006743 8 HLASISLSGDLILHNLASGAKAA-ELKDPNEQVLRVLDYSRNSRHLLVTAGD-----D------GTLHLWDTTGRSPKVS 75 (633)
Q Consensus 8 ~LaSgs~DG~I~IWDl~tgk~v~-~~~~~~~~~VssLafSpdg~~lLaSGs~-----D------GtI~IWDl~t~~~~v~ 75 (633)
.++.|+ ..+.+||..+++-.. .+.......-.++ ...++. +++.|+. . ..+.+||..+.+. .
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~-~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W--~ 80 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSL-VTKENQ-VFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW--L 80 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEE-ECTTCC-EEEEEEEEECSSCSSSCEEEEEEEEETTTTEE--E
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEE-EEECCE-EEEEcCcccCCCCCccccccceEEecCCCCeE--E
Confidence 344454 579999998877433 2211112222222 233555 7777773 1 1278888877652 2
Q ss_pred EeccCCCCe--EEEEEcCCCCEEEEEeCC--------CeEEEEeCCCCceeeEee--CCCCeEEEEEecCCCEEEEEEc-
Q 006743 76 WLKQHSAPT--AGISFSSDDKIIASVGLD--------KKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAGTS- 142 (633)
Q Consensus 76 ~l~~H~~~V--tsLafSPdg~~LaSgS~D--------GtVrIWDlrtgk~v~~i~--h~~~ItsLafSPdG~~LatGs~- 142 (633)
.+.....+- .+++.. ++++++.|+.+ ..+.+||+.+.+-...-. ....-.+++. -++++++.|+.
T Consensus 81 ~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 158 (315)
T 4asc_A 81 GMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKG 158 (315)
T ss_dssp ECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBC
T ss_pred ECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCC
Confidence 221111111 112222 56677777742 368999998865433221 1111112222 35667777776
Q ss_pred C-----CeEEEEECCCC
Q 006743 143 N-----GRVVFYDIRGK 154 (633)
Q Consensus 143 D-----GsV~IWDlrs~ 154 (633)
+ ..+.+||+.+.
T Consensus 159 ~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTSCBCCCEEEEETTTT
T ss_pred CCCcccceEEEEeCCCC
Confidence 2 45899998875
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.83 E-value=1.5 Score=43.70 Aligned_cols=138 Identities=12% Similarity=0.081 Sum_probs=78.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCce------eEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-
Q 006743 1 MYNCKDEHLASISLSGDLILHNLASGAK------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK- 73 (633)
Q Consensus 1 AFSpdG~~LaSgs~DG~I~IWDl~tgk~------v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~- 73 (633)
+|+|+|.+.++ .+|.++-.+..+... ...+-..--....++.|.+++. +.++ .||.|+-++-.+....
T Consensus 47 af~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~iyr~~pP~~~~~~ 121 (236)
T 1tl2_A 47 FLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKLYKASPPQSDTDN 121 (236)
T ss_dssp EECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCC
T ss_pred EECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCC-EEEe--CCCEEEEeCCCcCCCCc
Confidence 58998986666 778777777644221 1222111111246788999997 3443 5699988876332211
Q ss_pred ----eEEe-ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce------eeEee--CCCCeEEEEEecCCCEEEEE
Q 006743 74 ----VSWL-KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP------SSCIT--YEAPFSSLAFIDDDWILTAG 140 (633)
Q Consensus 74 ----v~~l-~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~------v~~i~--h~~~ItsLafSPdG~~LatG 140 (633)
...+ ...=..+..|.+.|+|.+.++. |+.++-+..-+... ...+. .-....-+.|.+++.+.++.
T Consensus 122 Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 122 WIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp HHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred eeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe
Confidence 0111 1111467999999999887777 77765444332221 11222 12234456788888777666
Q ss_pred EcCCeEE
Q 006743 141 TSNGRVV 147 (633)
Q Consensus 141 s~DGsV~ 147 (633)
+|.++
T Consensus 200 --~g~~Y 204 (236)
T 1tl2_A 200 --GGKFY 204 (236)
T ss_dssp --TTEEE
T ss_pred --CCeEE
Confidence 77444
No 332
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.12 E-value=16 Score=41.36 Aligned_cols=166 Identities=13% Similarity=0.114 Sum_probs=94.7
Q ss_pred EEEEEECCCcEEEEECCCCceeEEEe----CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc----
Q 006743 8 HLASISLSGDLILHNLASGAKAAELK----DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ---- 79 (633)
Q Consensus 8 ~LaSgs~DG~I~IWDl~tgk~v~~~~----~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~---- 79 (633)
.|..++.+ -|..||..+++.. .+. ......|.++....++. |..|..+| |..||..+..........
T Consensus 114 ~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~ 188 (758)
T 3ott_A 114 TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQ--IYVGTYNG-LCRYIPSNGKFEGIPLPVHSSQ 188 (758)
T ss_dssp EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCC--EEEEETTE-EEEEETTTTEEEEECCCCCTTC
T ss_pred cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCC--EEEEeCCC-HhhCccCCCceEEecCCCcccc
Confidence 44455555 5778887665433 231 11234577777776776 45556544 778887665421111111
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 006743 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (633)
Q Consensus 80 H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~-h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~~k~v 158 (633)
....|.++....++..|..|+. +-|..+|..+++...... ....|.++....+|.+. +|+.+ -|.+||..+.. +
T Consensus 189 ~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igT~~-Gl~~~~~~~~~--~ 263 (758)
T 3ott_A 189 SNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLL-AGTDN-GLYVYHNDTTP--L 263 (758)
T ss_dssp SSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEE-EEETT-EEEEECCTTSC--C
T ss_pred ccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEE-EEeCC-ceeEEecCCCc--E
Confidence 1234888888777776666664 458889988765433221 23458888887777654 45554 48888876642 2
Q ss_pred EEEeec------CCCCCeeEEEEccCCCeEE
Q 006743 159 TVLRAC------SSSEAVSSLCWQRAKPVFI 183 (633)
Q Consensus 159 ~~l~~~------~H~~~VtsLafsPdg~~La 183 (633)
..+... -....|.++..+.+|...+
T Consensus 264 ~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi 294 (758)
T 3ott_A 264 QHIIHDSRNIQSLTNNIIWNIFADQEHNIWL 294 (758)
T ss_dssp EEECCCTTCTTSCSCSCEEEEEECTTCCEEE
T ss_pred EEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE
Confidence 222210 0124578887777665443
No 333
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.09 E-value=1.3 Score=44.40 Aligned_cols=143 Identities=13% Similarity=0.048 Sum_probs=74.6
Q ss_pred CCCEEEEEECC-----CcEEEEECCCCceeEEEeCCC-CCcEEEEEEccCCCeEEEEEeCC-----CeEEEEECCCCCce
Q 006743 5 KDEHLASISLS-----GDLILHNLASGAKAAELKDPN-EQVLRVLDYSRNSRHLLVTAGDD-----GTLHLWDTTGRSPK 73 (633)
Q Consensus 5 dG~~LaSgs~D-----G~I~IWDl~tgk~v~~~~~~~-~~~VssLafSpdg~~lLaSGs~D-----GtI~IWDl~t~~~~ 73 (633)
+++.++.|+.+ ..+.+||+.+.+-...-.... .....++.+ ++ .+++.|+.+ ..+.+||..+...
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W- 196 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NR-LLYAVGGFDGTNRLNSAECYYPERNEW- 196 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTEE-
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CC-EEEEEeCCCCCCcCceEEEEeCCCCeE-
Confidence 45555665533 368889987664322111111 111122222 34 477777764 4589999877652
Q ss_pred eEEeccC--CCCeEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeEee--CCCCeEEEEEecCCCEEEEEEcC-
Q 006743 74 VSWLKQH--SAPTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAGTSN- 143 (633)
Q Consensus 74 v~~l~~H--~~~VtsLafSPdg~~LaSgS~D-----GtVrIWDlrtgk~v~~i~--h~~~ItsLafSPdG~~LatGs~D- 143 (633)
..+... ...-.+++.. ++++++.|+.+ ..+.+||+.+.+-...-. ....-.+++. -++++++.|+.+
T Consensus 197 -~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~ 273 (308)
T 1zgk_A 197 -RMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDG 273 (308)
T ss_dssp -EECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCS
T ss_pred -eeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCC
Confidence 112111 1111122222 57777777765 469999998865443321 1111112222 256777777754
Q ss_pred ----CeEEEEECCCC
Q 006743 144 ----GRVVFYDIRGK 154 (633)
Q Consensus 144 ----GsV~IWDlrs~ 154 (633)
..|.+||+.+.
T Consensus 274 ~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 274 HTFLDSVECYDPDTD 288 (308)
T ss_dssp SCBCCEEEEEETTTT
T ss_pred CcccceEEEEcCCCC
Confidence 35788888765
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.01 E-value=1.6 Score=43.87 Aligned_cols=146 Identities=11% Similarity=0.068 Sum_probs=73.6
Q ss_pred CCCEEEEEECC-------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeC------CCeEEEEECCCCC
Q 006743 5 KDEHLASISLS-------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD------DGTLHLWDTTGRS 71 (633)
Q Consensus 5 dG~~LaSgs~D-------G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~------DGtI~IWDl~t~~ 71 (633)
+++.++.|+.+ ..+.+||..+.+-...-.......-.+++. .++. +++.|+. -..+.+||..+..
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGM-IYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTE-EEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCE-EEEEcCCCCCCCccceEEEEcCCCCE
Confidence 45566667654 358888987765332211111100111222 3444 6677664 2358999998765
Q ss_pred ceeEEeccCCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeEee--CCCCeEEEEEecCCCEEEEEEcC-
Q 006743 72 PKVSWLKQHSAPTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAGTSN- 143 (633)
Q Consensus 72 ~~v~~l~~H~~~VtsLafSPdg~~LaSgS~D-----GtVrIWDlrtgk~v~~i~--h~~~ItsLafSPdG~~LatGs~D- 143 (633)
.....-......-.+++.. ++++++.|+.+ ..+.+||+.+.+-...-. ....-.+++. -++++++.|+.+
T Consensus 187 W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~ 264 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS-LAGSLYAIGGFAM 264 (318)
T ss_dssp EEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE-ETTEEEEECCBCC
T ss_pred EEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE-ECCEEEEECCeec
Confidence 3211101111111122222 56777777654 357899998765443321 1111112222 256777777654
Q ss_pred -------------CeEEEEECCCC
Q 006743 144 -------------GRVVFYDIRGK 154 (633)
Q Consensus 144 -------------GsV~IWDlrs~ 154 (633)
..|.+||+.+.
T Consensus 265 ~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 265 IQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp BC----CCBCCBCCCEEEEETTTT
T ss_pred cCCCCceeccceeeeEEEEeCCCC
Confidence 34778888765
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.54 E-value=6 Score=40.11 Aligned_cols=94 Identities=13% Similarity=0.017 Sum_probs=44.9
Q ss_pred CeEEEEECCCCCceeEEeccCCCCe-EEEEEcCCCCEEEEEeC------CCeEEEEeC--CCCceeeEee--CC-CCeEE
Q 006743 60 GTLHLWDTTGRSPKVSWLKQHSAPT-AGISFSSDDKIIASVGL------DKKLYTYDP--GSRRPSSCIT--YE-APFSS 127 (633)
Q Consensus 60 GtI~IWDl~t~~~~v~~l~~H~~~V-tsLafSPdg~~LaSgS~------DGtVrIWDl--rtgk~v~~i~--h~-~~Its 127 (633)
..+.+||..+.......-......- .+++.. ++++++.|+. ...+.+||+ .+.+-..... .. ....+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 5799999987663221111111111 233332 5666677664 235778887 4443322211 11 11111
Q ss_pred EEEecCCCEEEEEEcC----------------------CeEEEEECCCC
Q 006743 128 LAFIDDDWILTAGTSN----------------------GRVVFYDIRGK 154 (633)
Q Consensus 128 LafSPdG~~LatGs~D----------------------GsV~IWDlrs~ 154 (633)
.+...++++++.|+.+ ..+.+||+.+.
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~ 295 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG 295 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC--
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC
Confidence 1222356777777642 25788998865
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.32 E-value=0.38 Score=50.64 Aligned_cols=144 Identities=11% Similarity=0.113 Sum_probs=85.2
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEEeCCC-CCcEEEEEEc--cCCCeEEEEE-eCCCeEEEEECCCCCceeEEec---
Q 006743 6 DEHLASISLSGDLILHNLASGAKAAELKDPN-EQVLRVLDYS--RNSRHLLVTA-GDDGTLHLWDTTGRSPKVSWLK--- 78 (633)
Q Consensus 6 G~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~-~~~VssLafS--pdg~~lLaSG-s~DGtI~IWDl~t~~~~v~~l~--- 78 (633)
+..+++++.||.|+-+|.++|+..-.++... ...+. ..-. +.+...++.. ..||.|+.++..++......-.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~-~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIE-IQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEE-CCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEE-ecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 3478889999999999999999998887531 12222 1100 1122233333 5899999999876642211100
Q ss_pred cCCCCeEE---EEE-c----CCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCC--------eEEEEEe-----cCCCEE
Q 006743 79 QHSAPTAG---ISF-S----SDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAP--------FSSLAFI-----DDDWIL 137 (633)
Q Consensus 79 ~H~~~Vts---Laf-S----Pdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~--------ItsLafS-----PdG~~L 137 (633)
....++.. ..+ . -.+..+++|+.++.+...|+++|+.+..+....+ ..|.... ..+..|
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 01122221 000 0 0456789999999999999999999988754321 1122211 124678
Q ss_pred EEEEcCCeEEEEE
Q 006743 138 TAGTSNGRVVFYD 150 (633)
Q Consensus 138 atGs~DGsV~IWD 150 (633)
+.|..+..|.+.+
T Consensus 169 ~ig~~~y~v~~~~ 181 (339)
T 2be1_A 169 VIGKTIFELGIHS 181 (339)
T ss_dssp EEEEEEEECEECC
T ss_pred EEecceEEEEEEC
Confidence 8888888777777
No 337
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.03 E-value=16 Score=41.03 Aligned_cols=191 Identities=9% Similarity=0.048 Sum_probs=111.1
Q ss_pred CCCCEEEEEEC-CCcEEEEECCCCceeEEEeCCCCCcEEEEEEc--cCCCeEEEEEeC-------CCeE---------EE
Q 006743 4 CKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYS--RNSRHLLVTAGD-------DGTL---------HL 64 (633)
Q Consensus 4 pdG~~LaSgs~-DG~I~IWDl~tgk~v~~~~~~~~~~VssLafS--pdg~~lLaSGs~-------DGtI---------~I 64 (633)
.||++|..-.+ +..|...++...++-+.+..+....+..++|- |+-. +++++++ ||.. .+
T Consensus 140 yDGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~-yv~~~~e~~~P~pndg~~~~~~~~~~y~~ 218 (638)
T 3sbq_A 140 YDGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTK-YVFANAEFIIPHPNDGKVFDLQDENSYTM 218 (638)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCC-EEEEEECSCEESSCSSSCCCTTSTTEEEE
T ss_pred eeeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCcc-EEEecceeeccCCCCCcccccCChhhceE
Confidence 36788887764 56799999998888777777778888888886 5555 6666553 2221 11
Q ss_pred E---ECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCC--------------------------------------
Q 006743 65 W---DTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDK-------------------------------------- 103 (633)
Q Consensus 65 W---Dl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DG-------------------------------------- 103 (633)
| |..+.+..-+.+. .+..-.+...+++++.++.+.+.
T Consensus 219 f~~iD~~tm~v~~Qv~v--~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~ 296 (638)
T 3sbq_A 219 YNAIDAETMEMAFQVIV--DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLG 296 (638)
T ss_dssp EEEEETTTCSEEEEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCT
T ss_pred EEEEcCCccEEEEEEEc--CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEEC
Confidence 1 1122221111111 12223344566777777765431
Q ss_pred --eEEEEeCCC----C-ceeeEeeCCCCeEEEEEecCCCEEEEEEc-CCeEEEEECCCCCC--------ce-EEEeecCC
Q 006743 104 --KLYTYDPGS----R-RPSSCITYEAPFSSLAFIDDDWILTAGTS-NGRVVFYDIRGKPQ--------PL-TVLRACSS 166 (633)
Q Consensus 104 --tVrIWDlrt----g-k~v~~i~h~~~ItsLafSPdG~~LatGs~-DGsV~IWDlrs~~k--------~v-~~l~~~~H 166 (633)
.|.+.|.+. + .....+........+..+|||+++++++. +.+|.++|.+.... +. .+.....-
T Consensus 297 g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~ 376 (638)
T 3sbq_A 297 DSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL 376 (638)
T ss_dssp TCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC
T ss_pred CCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC
Confidence 244444443 1 22333344455567889999999987765 78899999984210 00 01111123
Q ss_pred CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 167 SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 167 ~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
.-.....+|+++| ..+.+.-.|..|..|++.
T Consensus 377 GlGPlHt~Fd~~G------------~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 377 GLGPLHTTFDGRG------------NAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp CSCEEEEEECSSS------------EEEEEETTTTEEEEEEHH
T ss_pred CCcccEEEECCCC------------ceEeeeeecceEEEEecc
Confidence 4456677887754 344444568888888774
No 338
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.76 E-value=7.6 Score=40.92 Aligned_cols=138 Identities=12% Similarity=0.123 Sum_probs=93.8
Q ss_pred CCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEE
Q 006743 59 DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (633)
Q Consensus 59 DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~La 138 (633)
+.+|.|-|+.......+.-..-. +.-.+|..+.||.-. ..++.++|+++...+..+.....|.--.|-.+ +.|+
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~Ad----sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~-~~L~ 121 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISAD----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVA 121 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCCS----EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSS-SEEE
T ss_pred CCEEEEEECCCCCCccccccccc----eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCC-CeEE
Confidence 34788889987664433322222 234588888887776 67899999999998888887788888888754 4555
Q ss_pred EEEcCCeEEEEECCCCCCceEEEeecCC--CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 139 AGTSNGRVVFYDIRGKPQPLTVLRACSS--SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 139 tGs~DGsV~IWDlrs~~k~v~~l~~~~H--~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
..+ +..|+-|++.....|.+.+..+.. ...|..-..+++.++++..+-...... ..|.+.+|-+
T Consensus 122 lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~-----v~G~mQLYS~ 187 (365)
T 2xzh_A 122 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNR-----VVGAMQLYSV 187 (365)
T ss_dssp EEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTE-----EEEEEEEEET
T ss_pred EEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCc-----cceeEEEEee
Confidence 554 357999999987788888875422 355777777888888765432211111 2356777755
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.60 E-value=21 Score=38.44 Aligned_cols=101 Identities=15% Similarity=0.128 Sum_probs=59.3
Q ss_pred cEEEEEEccCCCeEEEEEeCC-CeEEEEECCCCCce-eEEecc------CCCCeEEEEEcCC---CCEEEEEeC------
Q 006743 39 VLRVLDYSRNSRHLLVTAGDD-GTLHLWDTTGRSPK-VSWLKQ------HSAPTAGISFSSD---DKIIASVGL------ 101 (633)
Q Consensus 39 ~VssLafSpdg~~lLaSGs~D-GtI~IWDl~t~~~~-v~~l~~------H~~~VtsLafSPd---g~~LaSgS~------ 101 (633)
....|+|.|+|+ ++++ ... +.|++++..++... +..+.. .......|+|+|+ +.+|+.+..
T Consensus 28 ~P~~~a~~pdG~-l~V~-e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 28 KPHALLWGPDNQ-IWLT-ERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SEEEEEECTTSC-EEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CceEEEEcCCCc-EEEE-EcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 345799999998 5554 555 47888876544321 222211 2456779999995 555554432
Q ss_pred -------CCeEEEEeCCCC--ce---eeE---ee--CCCCeEEEEEecCCCEEEEEE
Q 006743 102 -------DKKLYTYDPGSR--RP---SSC---IT--YEAPFSSLAFIDDDWILTAGT 141 (633)
Q Consensus 102 -------DGtVrIWDlrtg--k~---v~~---i~--h~~~ItsLafSPdG~~LatGs 141 (633)
...|..|++..+ +. ..+ +. .......|+|.|||++.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666665322 11 111 21 234578999999998776644
No 340
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.48 E-value=4.3 Score=42.10 Aligned_cols=142 Identities=9% Similarity=0.099 Sum_probs=78.1
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc-eeE----EeccCCCCeEEEEEcCC---CCEEEEEe-C-------CC
Q 006743 40 LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP-KVS----WLKQHSAPTAGISFSSD---DKIIASVG-L-------DK 103 (633)
Q Consensus 40 VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~-~v~----~l~~H~~~VtsLafSPd---g~~LaSgS-~-------DG 103 (633)
...|+|.|+++. |+.+...|.|++++..+... .+. ...........|+|+|+ +..|+.+. . ..
T Consensus 20 P~~i~~~pdG~~-l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 20 PWALAFLPDNHG-MLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp EEEEEECSTTCC-EEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred cEEEEEcCCCCE-EEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 456999999973 55566789999998543211 011 11122346789999995 45554443 2 23
Q ss_pred eEEEEeCCCC--c---eeeEe---e----CCCCeEEEEEecCCCEEEEEEc-------------CCeEEEEECCCCC---
Q 006743 104 KLYTYDPGSR--R---PSSCI---T----YEAPFSSLAFIDDDWILTAGTS-------------NGRVVFYDIRGKP--- 155 (633)
Q Consensus 104 tVrIWDlrtg--k---~v~~i---~----h~~~ItsLafSPdG~~LatGs~-------------DGsV~IWDlrs~~--- 155 (633)
.|..|++... + ....+ . .......|+|.|||.+.++.+. .|.|.-+|.....
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~ 178 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD 178 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence 5666766532 1 11111 1 1122467999999955554433 2567777776430
Q ss_pred C--------ceEEEeecCCCCCeeEEEEcc-CCCeEEE
Q 006743 156 Q--------PLTVLRACSSSEAVSSLCWQR-AKPVFID 184 (633)
Q Consensus 156 k--------~v~~l~~~~H~~~VtsLafsP-dg~~Las 184 (633)
. ...++. .+| .....++|+| ++...++
T Consensus 179 npf~~~~~~~~~i~a-~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 179 NPFIKESGVRAEIWS-YGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CTTTTSTTSCTTEEE-ECC-SEEEEEEEETTTTEEEEE
T ss_pred CCCcCCCCCCccEEE-EcC-cCccceEEECCCCCEEEE
Confidence 0 112222 233 3467899998 4544443
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=89.72 E-value=1.6 Score=49.86 Aligned_cols=149 Identities=14% Similarity=0.106 Sum_probs=79.7
Q ss_pred CCCEEEEEECC------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC--eEEEEECCCCCceeEE
Q 006743 5 KDEHLASISLS------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSW 76 (633)
Q Consensus 5 dG~~LaSgs~D------G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DG--tI~IWDl~t~~~~v~~ 76 (633)
+++.++.||.+ +.+.+||..+.+-...-.......-.+++...++. +++.|+.++ .+.+||..+.......
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGN-VLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSC-EEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCE-EEEECCCCCCCCEEEEECCCCceEEcc
Confidence 56666777644 35788998775432211111111111223323555 777887655 6999999876532111
Q ss_pred ----eccCCCCeEEEEEcCC-CCEEEEEeC--C-----CeEEEEeCCCCc------eeeEee--CCCC-eEEEEEecCCC
Q 006743 77 ----LKQHSAPTAGISFSSD-DKIIASVGL--D-----KKLYTYDPGSRR------PSSCIT--YEAP-FSSLAFIDDDW 135 (633)
Q Consensus 77 ----l~~H~~~VtsLafSPd-g~~LaSgS~--D-----GtVrIWDlrtgk------~v~~i~--h~~~-ItsLafSPdG~ 135 (633)
+........++.+..+ +++++.|+. + ..+.+||+.+.. -..... .... -.+++...+++
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~ 609 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRK 609 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTE
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCE
Confidence 1111112233555554 667777775 2 368999998876 222111 1111 11233333477
Q ss_pred EEEEEEcC--------CeEEEEECCCC
Q 006743 136 ILTAGTSN--------GRVVFYDIRGK 154 (633)
Q Consensus 136 ~LatGs~D--------GsV~IWDlrs~ 154 (633)
+++.|+.+ ..|.+||+.+.
T Consensus 610 iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 610 LLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp EEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred EEEECCccCCCCCCCCCeEEEEECCCC
Confidence 77777743 45899999875
No 342
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=89.01 E-value=7.5 Score=40.76 Aligned_cols=77 Identities=16% Similarity=0.165 Sum_probs=51.3
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeE--e-----eCCCCeEEEEEecC---CCEEEEE---EcC
Q 006743 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC--I-----TYEAPFSSLAFIDD---DWILTAG---TSN 143 (633)
Q Consensus 77 l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~--i-----~h~~~ItsLafSPd---G~~LatG---s~D 143 (633)
+-..-...+.|+|.|++.++++--..|.|++++..+++.... + ........|+++|+ +.+|.+. ..+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 333445678999999999777665589999998766654222 1 23566899999996 4445443 234
Q ss_pred CeEEEEECCC
Q 006743 144 GRVVFYDIRG 153 (633)
Q Consensus 144 GsV~IWDlrs 153 (633)
+.|.-|.+..
T Consensus 107 ~~v~R~~~~~ 116 (347)
T 3das_A 107 NRIVRMLYDE 116 (347)
T ss_dssp EEEEEEEBCT
T ss_pred CEEEEEEeCC
Confidence 5666676654
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=88.81 E-value=2 Score=43.71 Aligned_cols=135 Identities=10% Similarity=-0.002 Sum_probs=63.5
Q ss_pred CcEEEEECCCCceeE--EEeCCCCCcEEEEEEccCCCeEEEEEeC------CCeEEEEEC--CCCCceeEEeccC--C-C
Q 006743 16 GDLILHNLASGAKAA--ELKDPNEQVLRVLDYSRNSRHLLVTAGD------DGTLHLWDT--TGRSPKVSWLKQH--S-A 82 (633)
Q Consensus 16 G~I~IWDl~tgk~v~--~~~~~~~~~VssLafSpdg~~lLaSGs~------DGtI~IWDl--~t~~~~v~~l~~H--~-~ 82 (633)
..+.+||..+.+-.. .+......... ++.. ++. +++.|+. ...+.+||+ .+.. -..+... . .
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~-~~~~-~~~-iyv~GG~~~~~~~~~~v~~~d~d~~~~~--W~~~~~~~~~~~ 242 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAA-VVNK-GDK-TWLINGEAKPGLRTDAVFELDFTGNNLK--WNKLAPVSSPDG 242 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCE-EEEE-TTE-EEEECCEEETTEECCCEEEEECC---CE--EEECCCSSTTTC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCccccc-EEEE-CCE-EEEEeeecCCCcccCceEEEEecCCCCc--EEecCCCCCCcc
Confidence 578999987765332 22211111112 2222 333 6777664 345778887 3333 2222111 1 1
Q ss_pred CeEEEEEcCCCCEEEEEeCC----------------------CeEEEEeCCCCceeeEeeCC-CCeEEEEEecCCCEEEE
Q 006743 83 PTAGISFSSDDKIIASVGLD----------------------KKLYTYDPGSRRPSSCITYE-APFSSLAFIDDDWILTA 139 (633)
Q Consensus 83 ~VtsLafSPdg~~LaSgS~D----------------------GtVrIWDlrtgk~v~~i~h~-~~ItsLafSPdG~~Lat 139 (633)
...+.+...++++++.|+.+ ..+.+||+.+.+-...-... ......+..-++++++.
T Consensus 243 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~ 322 (357)
T 2uvk_A 243 VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLII 322 (357)
T ss_dssp CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEE
T ss_pred cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEE
Confidence 11111122256777777632 25789999876543332111 11111222346788888
Q ss_pred EEcCC------eEEEEECCCCC
Q 006743 140 GTSNG------RVVFYDIRGKP 155 (633)
Q Consensus 140 Gs~DG------sV~IWDlrs~~ 155 (633)
|+.++ .|.++++++++
T Consensus 323 GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 323 GGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp EEECGGGCEEEEEEEEEC-CCS
T ss_pred eeeCCCCCEeeeEEEEEEcCcE
Confidence 88653 36677888764
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.77 E-value=5.6 Score=44.71 Aligned_cols=113 Identities=11% Similarity=0.022 Sum_probs=74.8
Q ss_pred EEEEEccCCCeEEEEEeCCCeEEEEECCCCC------------ceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q 006743 41 RVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS------------PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTY 108 (633)
Q Consensus 41 ssLafSpdg~~lLaSGs~DGtI~IWDl~t~~------------~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIW 108 (633)
..+..+|+|++++++|--+.+|.|+|++... ..+.... -.-.....+|.++|+...+.--|..|..|
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEE
Confidence 3478899999877788889999999986311 1122222 33456788999999666667789999999
Q ss_pred eCCCC----------ceeeEeeCCCCeEEEEE------ecCCCEEEEEEc---CCe----------EEEEECCCC
Q 006743 109 DPGSR----------RPSSCITYEAPFSSLAF------IDDDWILTAGTS---NGR----------VVFYDIRGK 154 (633)
Q Consensus 109 Dlrtg----------k~v~~i~h~~~ItsLaf------SPdG~~LatGs~---DGs----------V~IWDlrs~ 154 (633)
++... ..+..+.....+-.+.- .+||++|++.+. |+. -.++|+...
T Consensus 405 ni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsGd 479 (638)
T 3sbq_A 405 NMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISGD 479 (638)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSSS
T ss_pred eccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCCC
Confidence 98642 23333433333333433 568999999865 443 366777543
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=87.44 E-value=12 Score=46.67 Aligned_cols=92 Identities=14% Similarity=0.177 Sum_probs=58.2
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC-
Q 006743 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH- 80 (633)
Q Consensus 2 FSpdG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H- 80 (633)
.||..+.||.-. ...+.|||+++...++.+.- ...+|. -+|-... .|+..+ +..|+-|++.+...+++.+..|
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~Vvf-WkWis~~--~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTF-WKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceE-EEecCCC--eeEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 467777776654 67899999988887777664 334443 4676543 344443 4679999997654444444444
Q ss_pred ---CCCeEEEEEcCCCCEEEEE
Q 006743 81 ---SAPTAGISFSSDDKIIASV 99 (633)
Q Consensus 81 ---~~~VtsLafSPdg~~LaSg 99 (633)
...|..-+.+++.++++..
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~ 168 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLT 168 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEE
Confidence 3456566666666666543
No 346
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=86.52 E-value=31 Score=35.24 Aligned_cols=199 Identities=11% Similarity=0.028 Sum_probs=108.6
Q ss_pred CCCCEEEEEECCCcEEEEECCCCc-------eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC---CCC--
Q 006743 4 CKDEHLASISLSGDLILHNLASGA-------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT---GRS-- 71 (633)
Q Consensus 4 pdG~~LaSgs~DG~I~IWDl~tgk-------~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~---t~~-- 71 (633)
++..++++.+.+|.|+-..+..-+ -+..+.-...+.+..+......+ .++..+..|.++-.... ...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~-~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHD-YLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTC-EEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCC-EEEEEECCCeEEEEEHHHCCCCCcc
Confidence 466788999999999988764322 11112212334444444444444 57777888987776652 111
Q ss_pred ----ce--eEEeccCCCCeEEEEEcC---CCCEEEEEeCCCeEEEEeCCC-------CceeeEeeCCCCeEEEEEecCCC
Q 006743 72 ----PK--VSWLKQHSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGS-------RRPSSCITYEAPFSSLAFIDDDW 135 (633)
Q Consensus 72 ----~~--v~~l~~H~~~VtsLafSP---dg~~LaSgS~DGtVrIWDlrt-------gk~v~~i~h~~~ItsLafSPdG~ 135 (633)
+. ...+.. ...|.++...+ +..+|+.++.+|.++...+.. +.....+...+.+..+.....+.
T Consensus 85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 00 001222 23455553332 467889999999999887742 22222223456677776666667
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCC
Q 006743 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (633)
Q Consensus 136 ~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~ 211 (633)
.|+..+.+|.+..+....-.. .. .....|..+...++...+... ...++..++..+..|..+..++..+
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~----~g--R~~~Gv~~i~L~~~d~vv~~~-~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRL----TN--RGTQGVCGMKLKEGDLFVKVL-SVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCB----CC--TTBCCEECCCCCTTCCEEEEE-ECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred EEEEEeCCCcEEEEEHHHccc----cC--CCCCCeEeEEeCCCCEEEEEE-EECCCCeEEEEECCCceEEEEHHHh
Confidence 899999999999988764210 00 112334444444322222211 1122334555566777777766544
No 347
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=85.84 E-value=14 Score=40.32 Aligned_cols=138 Identities=12% Similarity=0.121 Sum_probs=92.4
Q ss_pred CCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEE
Q 006743 59 DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (633)
Q Consensus 59 DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~La 138 (633)
+..|.|-|+.......+.-..- -+.-.+|..+.|+.-. ..++.|+|+++...+..+.....|.--.|-.+ +.|+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~A----dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~-~~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCC----SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET-TEEE
T ss_pred CCeEEEEECCCCCcceeccccc----ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC-CeEE
Confidence 3478888887766443322221 2344688778777766 67999999999998888877777877778754 4555
Q ss_pred EEEcCCeEEEEECCCCCCceEEEeecCC--CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCC
Q 006743 139 AGTSNGRVVFYDIRGKPQPLTVLRACSS--SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (633)
Q Consensus 139 tGs~DGsV~IWDlrs~~k~v~~l~~~~H--~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDl 208 (633)
..+ +..|+-|++.....|.+++..+.. ...|..-..+++.++++..+-..... ...|.+.+|-+
T Consensus 121 lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~-----~v~G~mQLYS~ 186 (494)
T 1bpo_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQN-----RVVGAMQLYSV 186 (494)
T ss_dssp EEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETT-----EEEEEEEEEES
T ss_pred EEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCC-----cccceEEEeec
Confidence 554 467999999887788888875422 35577777788888876543221111 12466777755
No 348
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=85.84 E-value=34 Score=35.18 Aligned_cols=139 Identities=10% Similarity=-0.048 Sum_probs=71.4
Q ss_pred CEEEEEECCCcEEEEECCC-CceeEEE-eCCCCCcEEEEEEccCCCeEEEEEeCCC----eEEEEECCCCCceeEEecc-
Q 006743 7 EHLASISLSGDLILHNLAS-GAKAAEL-KDPNEQVLRVLDYSRNSRHLLVTAGDDG----TLHLWDTTGRSPKVSWLKQ- 79 (633)
Q Consensus 7 ~~LaSgs~DG~I~IWDl~t-gk~v~~~-~~~~~~~VssLafSpdg~~lLaSGs~DG----tI~IWDl~t~~~~v~~l~~- 79 (633)
..|.+|...| +.+++... ++.-..+ .......|.+|++.|.....|.++...| .|...+-..... ..+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW--~~~~~~ 99 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNW--TEATRP 99 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCC--EECSBC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCc--eECCcc
Confidence 3677788777 66665433 2222222 1123467899999983222355555555 444432222211 11110
Q ss_pred -------------CCCCeEEEEEcC-C-CCEEEEEeCCCeEEEEeCCCCceeeEee--------------------CCCC
Q 006743 80 -------------HSAPTAGISFSS-D-DKIIASVGLDKKLYTYDPGSRRPSSCIT--------------------YEAP 124 (633)
Q Consensus 80 -------------H~~~VtsLafSP-d-g~~LaSgS~DGtVrIWDlrtgk~v~~i~--------------------h~~~ 124 (633)
+...|.++++.| + ...|+.+...+.|...+-. ++.-..+. ....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCCCCCc
Confidence 112477899987 3 5667777666666655432 22111111 1235
Q ss_pred eEEEEEecC-CCEEEEEEcCCeEEEE
Q 006743 125 FSSLAFIDD-DWILTAGTSNGRVVFY 149 (633)
Q Consensus 125 ItsLafSPd-G~~LatGs~DGsV~IW 149 (633)
+.+|.++|. ...|+++..++.|+..
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEE
Confidence 788999883 4555666555555544
No 349
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=79.79 E-value=8.9 Score=40.10 Aligned_cols=118 Identities=15% Similarity=0.068 Sum_probs=63.9
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCc------EEEEEEc-----cCCCeEEEEEeCCCeEEEEECCCCCc-
Q 006743 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQV------LRVLDYS-----RNSRHLLVTAGDDGTLHLWDTTGRSP- 72 (633)
Q Consensus 5 dG~~LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~------VssLafS-----pdg~~lLaSGs~DGtI~IWDl~t~~~- 72 (633)
.+..+++|+.+|.+...|+.+|+.+.++....... ..|.... ..+. .++.+..+..|.+.+. ++..
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~-~v~ig~~~y~v~~~~~-sG~~W 187 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECEN-MIVIGKTIFELGIHSY-DGASY 187 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CC-EEEEEEEEEECEECCT-TSCCC
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCC-eEEEecceEEEEEECC-CCCeE
Confidence 46678899999999999999999999887432110 0111111 1123 5777777777777663 2220
Q ss_pred e--eEEeccCCCC--e-EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee-EeeCCCCe
Q 006743 73 K--VSWLKQHSAP--T-AGISFSSDDKIIASVGLDKKLYTYDPGSRRPSS-CITYEAPF 125 (633)
Q Consensus 73 ~--v~~l~~H~~~--V-tsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~-~i~h~~~I 125 (633)
. ......+... + .+-....|+.+ +.++.||.|..+|.++++.+. ......++
T Consensus 188 ~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W~~~~l~sPv 245 (339)
T 2be1_A 188 NVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARWVSPTFPGII 245 (339)
T ss_dssp CCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEEECCCCSSCE
T ss_pred EEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEEEeecCCCCe
Confidence 0 0000010000 0 00000123555 557889999999998888765 33334443
No 350
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=79.58 E-value=53 Score=32.86 Aligned_cols=143 Identities=17% Similarity=0.099 Sum_probs=85.6
Q ss_pred CEEEEEECCCcEEEE---ECCCCceeEEEeCCCCCcEEEEEEccC-CCeEEEEEeCCCeEEEEECCCCC-----ceeEEe
Q 006743 7 EHLASISLSGDLILH---NLASGAKAAELKDPNEQVLRVLDYSRN-SRHLLVTAGDDGTLHLWDTTGRS-----PKVSWL 77 (633)
Q Consensus 7 ~~LaSgs~DG~I~IW---Dl~tgk~v~~~~~~~~~~VssLafSpd-g~~lLaSGs~DGtI~IWDl~t~~-----~~v~~l 77 (633)
++|+..+.+|.++-- ++..+.... + -..++.|..+.. .+ ...+++..+.+|.|+...+.... .....+
T Consensus 36 ~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~l 112 (276)
T 3no0_A 36 EGLFLVSNRGRVYWIAGSQALQGSKVS-L-KSREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKL 112 (276)
T ss_dssp SCEEEEETTSEEEEECSHHHHTSEECC-C-SSTTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCC
T ss_pred CEEEEEcCCCeEEEEEhhhCccCcccc-c-CCCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEec
Confidence 345566677776643 332222111 2 223444444433 32 23378999999999999875431 111123
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC---------CceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEE
Q 006743 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS---------RRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (633)
Q Consensus 78 ~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrt---------gk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~I 148 (633)
+. .+.+..+........++..+.+|.++.++... |.....+.....|..+...+++.+++..+..|.++.
T Consensus 113 ke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr 191 (276)
T 3no0_A 113 TE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKK 191 (276)
T ss_dssp CT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEE
T ss_pred CC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 33 34566665555667899999999988887521 111112334566777766667779999999999998
Q ss_pred EECCC
Q 006743 149 YDIRG 153 (633)
Q Consensus 149 WDlrs 153 (633)
..+..
T Consensus 192 ~~~~e 196 (276)
T 3no0_A 192 ISHEE 196 (276)
T ss_dssp EEGGG
T ss_pred eEHHH
Confidence 87754
No 351
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=79.01 E-value=62 Score=33.25 Aligned_cols=146 Identities=10% Similarity=0.103 Sum_probs=85.9
Q ss_pred CCCCEEEEEECCCcEEEEECCC----CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC---CCCC--c-e
Q 006743 4 CKDEHLASISLSGDLILHNLAS----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT---TGRS--P-K 73 (633)
Q Consensus 4 pdG~~LaSgs~DG~I~IWDl~t----gk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl---~t~~--~-~ 73 (633)
++..++++.+.+|.|+--.+.. +.....++ ..+.+..+......+ .|+..+..|.++-+.. .... . -
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lk--e~D~l~~~~~~~t~d-~ll~fT~~Gr~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK--DTDRLLAMLEMNTKD-VLLLFTNKGNYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC--TTCCEEEEEEEETTS-EEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccC--CCCEEEEEEEECCCC-EEEEEECCCEEEEEEHHHCcCCCCCCCC
Confidence 5677889999999998776531 11111222 334444344444444 5667778888766654 2111 0 0
Q ss_pred e---E--EeccCCCCeEEE-EEcC--CCCEEEEEeCCCeEEEEeCCC------CceeeE--eeCCCCeEEEEEecCCCEE
Q 006743 74 V---S--WLKQHSAPTAGI-SFSS--DDKIIASVGLDKKLYTYDPGS------RRPSSC--ITYEAPFSSLAFIDDDWIL 137 (633)
Q Consensus 74 v---~--~l~~H~~~VtsL-afSP--dg~~LaSgS~DGtVrIWDlrt------gk~v~~--i~h~~~ItsLafSPdG~~L 137 (633)
. . .+. ....|.++ .... ++.+++.++.+|.++...+.. ++-+.. +...+.+..+........|
T Consensus 80 ~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i 158 (323)
T 1wp5_A 80 QHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNEL 158 (323)
T ss_dssp EEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEE
T ss_pred cChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEE
Confidence 1 1 122 23445554 3432 366899999999999987742 112222 2334666666666666788
Q ss_pred EEEEcCCeEEEEECCC
Q 006743 138 TAGTSNGRVVFYDIRG 153 (633)
Q Consensus 138 atGs~DGsV~IWDlrs 153 (633)
+..+.+|.+..+....
T Consensus 159 ~l~T~~G~~irf~~~e 174 (323)
T 1wp5_A 159 FLVTHNGYALWFDESE 174 (323)
T ss_dssp EEEETTSEEEEEEGGG
T ss_pred EEEeCCCcEEEEEHHH
Confidence 8999999998887754
No 352
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=78.29 E-value=58 Score=32.57 Aligned_cols=145 Identities=12% Similarity=0.124 Sum_probs=88.2
Q ss_pred CCCEEEEEECCCcEEEEECCCCc------eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC------c
Q 006743 5 KDEHLASISLSGDLILHNLASGA------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS------P 72 (633)
Q Consensus 5 dG~~LaSgs~DG~I~IWDl~tgk------~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~------~ 72 (633)
++.+++.++.+|.|+-..+.+-. ....++ .++.+-.+......+ .++..+.+|.++.+....-. .
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk--egD~l~~~~~~~~~~-~ill~T~~G~~~r~~~~eip~~gR~a~ 155 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT--EGDEVVSIASSVDET-HILLFTKKGRVARFSVREVPPSTPGAR 155 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC--TTCCEEEEEECCSSC-EEEEEETTSEEEEEEGGGSCBCCTTCC
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC--CCCEEEEEEEeCCCC-EEEEEECCCEEEEEEhhhCCCcCCCCC
Confidence 45789999999999998875431 112222 334444444444444 67788889999888762211 0
Q ss_pred eeE--EeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC-------CceeeEeeCCCCeEEEEEecCCCEEEEEEcC
Q 006743 73 KVS--WLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-------RRPSSCITYEAPFSSLAFIDDDWILTAGTSN 143 (633)
Q Consensus 73 ~v~--~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrt-------gk~v~~i~h~~~ItsLafSPdG~~LatGs~D 143 (633)
-+. .+.. ...|..+...+++..++.++..|.++...+.. ++-+..+...+.+..+....+...++..+.+
T Consensus 156 Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~ 234 (276)
T 3no0_A 156 GVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKN 234 (276)
T ss_dssp CEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETT
T ss_pred CEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCC
Confidence 011 1222 35566665555667899999999999887632 2223333344555555444444577778888
Q ss_pred CeEEE--EECCC
Q 006743 144 GRVVF--YDIRG 153 (633)
Q Consensus 144 GsV~I--WDlrs 153 (633)
|.+.. ++...
T Consensus 235 G~~ir~~~~~~~ 246 (276)
T 3no0_A 235 GKAFYDKINQKD 246 (276)
T ss_dssp SCEEEEEEEGGG
T ss_pred CeEEEeeeCHHH
Confidence 88877 77653
No 353
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=77.17 E-value=69 Score=32.83 Aligned_cols=108 Identities=11% Similarity=-0.063 Sum_probs=57.4
Q ss_pred cEEEEEEccCC-CeEEEEEeCCCeEEEEECCCCCceeEEec-------------------cCCCCeEEEEEcC-CCCEEE
Q 006743 39 VLRVLDYSRNS-RHLLVTAGDDGTLHLWDTTGRSPKVSWLK-------------------QHSAPTAGISFSS-DDKIIA 97 (633)
Q Consensus 39 ~VssLafSpdg-~~lLaSGs~DGtI~IWDl~t~~~~v~~l~-------------------~H~~~VtsLafSP-dg~~La 97 (633)
.|.+|++.|.+ ...|+++...+-|...+-.+... ..+. .....|.+|.+.| +...|+
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW--~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~ 193 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASW--EPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLY 193 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBC--EECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCe--EECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEE
Confidence 46678888632 22466666666666554332221 1111 1123578999998 455556
Q ss_pred EEeCCCeEEEEeCCCCceeeEeeC--------------CCCeEEEEEecC-CCEEEEEEcCCeEEEEE
Q 006743 98 SVGLDKKLYTYDPGSRRPSSCITY--------------EAPFSSLAFIDD-DWILTAGTSNGRVVFYD 150 (633)
Q Consensus 98 SgS~DGtVrIWDlrtgk~v~~i~h--------------~~~ItsLafSPd-G~~LatGs~DGsV~IWD 150 (633)
.+..++.|...+-. ++.-..+.. ...+.+++++|. ...|+++...+ |+..+
T Consensus 194 vg~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~ 259 (394)
T 3b7f_A 194 IGMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD 259 (394)
T ss_dssp EEEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE
T ss_pred EEECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC
Confidence 56555545444322 222111110 134889999985 46777776554 55444
No 354
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=76.78 E-value=68 Score=32.54 Aligned_cols=200 Identities=8% Similarity=0.028 Sum_probs=105.5
Q ss_pred CCCCEEEEEECCCcEEEEECCCCce-------eEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC---CCCCc-
Q 006743 4 CKDEHLASISLSGDLILHNLASGAK-------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT---TGRSP- 72 (633)
Q Consensus 4 pdG~~LaSgs~DG~I~IWDl~tgk~-------v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl---~t~~~- 72 (633)
|+..++++.+.+|.|+--.+.+-+. +..+.-...+.+..+......+ .|+..+..|.++-+.. .....
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~-~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHD-HILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTC-EEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCC-EEEEEECCCEEEEEEhhHCcCCCCC
Confidence 4567889999999998777644221 1111111233343333333444 5667778888666554 22211
Q ss_pred -e-eE-----EeccCCCCeEEEEE-c--CCCCEEEEEeCCCeEEEEeCCC-------CceeeEeeCCCCeEEEEEecCCC
Q 006743 73 -K-VS-----WLKQHSAPTAGISF-S--SDDKIIASVGLDKKLYTYDPGS-------RRPSSCITYEAPFSSLAFIDDDW 135 (633)
Q Consensus 73 -~-v~-----~l~~H~~~VtsLaf-S--Pdg~~LaSgS~DGtVrIWDlrt-------gk~v~~i~h~~~ItsLafSPdG~ 135 (633)
. .. .+. ....|.++.. . .++.+++.++.+|.++...+.. +.....+...+.+..+.......
T Consensus 80 a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 80 ARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGED 158 (307)
T ss_dssp SCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTC
T ss_pred CCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCC
Confidence 0 11 122 3345655543 2 2566899999999999987642 11111122346666666666667
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCCCCC
Q 006743 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (633)
Q Consensus 136 ~LatGs~DGsV~IWDlrs~~k~v~~l~~~~H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr~~~ 212 (633)
.|+..+.+|.+..++...-.. .. .....+..+...++...+... ...++..++..+..|.++..++..|.
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~----~g--r~a~Gv~~i~L~~~d~Vv~~~-~~~~~~~ll~~T~~G~~Kr~~~~e~~ 228 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRA----MG--CNTTGVRGIRLGEGDKVVSLI-VPRGDGAILTATQNGYGKRTAVAEYP 228 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCB----CC--TTCCCEECCCCCTTCCEEEEE-CCCSSCEEEEEETTSEEEEECGGGSC
T ss_pred EEEEECCCCcEEEEEHHHcCc----cC--CCCCCeEeEEeCCCCEEEEEE-EecCCCEEEEEEcCCceEEEEHHHhc
Confidence 888999999988887654210 00 112233444444433333222 22233445666667888877765444
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=73.56 E-value=43 Score=39.60 Aligned_cols=38 Identities=21% Similarity=0.256 Sum_probs=33.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee
Q 006743 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT 120 (633)
Q Consensus 83 ~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~ 120 (633)
.|.+++..++..++++.+.|+++|+|++.+++++....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777888888899999999999999999999887653
No 356
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=71.72 E-value=95 Score=31.90 Aligned_cols=146 Identities=15% Similarity=0.113 Sum_probs=88.5
Q ss_pred CCCEEEEEECCCcEEEEECCCCc-------eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC--CCCce--
Q 006743 5 KDEHLASISLSGDLILHNLASGA-------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT--GRSPK-- 73 (633)
Q Consensus 5 dG~~LaSgs~DG~I~IWDl~tgk-------~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~--t~~~~-- 73 (633)
+..+++.++.+|.|+-..+.+-. ....++. ....+. +......+ .|+..+.+|.+..+... .-...
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~-~~~~~~~d-~ill~T~~G~~~rf~~~~~eip~~gr 184 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVG-AVLCSAGD-DLLLVSANGQSIRFSATDEALRPMGR 184 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEE-EEEECTTC-EEEEEETTSEEEEEECCTTTSCCCCT
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEE-EEEecCCC-EEEEEECCCeEEEEECcccccCcCCc
Confidence 46789999999999988765421 1222332 233444 44443444 57778888998888776 21100
Q ss_pred ----eEEec-cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC-------CceeeEee--C-CCCeEEEEEecCCCEEE
Q 006743 74 ----VSWLK-QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-------RRPSSCIT--Y-EAPFSSLAFIDDDWILT 138 (633)
Q Consensus 74 ----v~~l~-~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrt-------gk~v~~i~--h-~~~ItsLafSPdG~~La 138 (633)
+..+. .....|.++...+++..++.++..|.++...+.. ++-+..+. . .+.+..+....+...|+
T Consensus 185 ~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~ 264 (327)
T 3uc1_A 185 ATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELY 264 (327)
T ss_dssp TSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEE
T ss_pred CCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEE
Confidence 11111 2345677776666677899999999999887532 12222222 1 44555555555556778
Q ss_pred EEEcCCeEEEEECCC
Q 006743 139 AGTSNGRVVFYDIRG 153 (633)
Q Consensus 139 tGs~DGsV~IWDlrs 153 (633)
..+.+|.+.-++...
T Consensus 265 l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 265 AVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEGGGCEEEEEGGG
T ss_pred EEcCCCeEEEEehhh
Confidence 888888887776653
No 357
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=69.40 E-value=1.1e+02 Score=31.92 Aligned_cols=147 Identities=12% Similarity=0.119 Sum_probs=87.7
Q ss_pred CCCCEEEEEECCCcEEEEECCC-------CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC---CCCCc-
Q 006743 4 CKDEHLASISLSGDLILHNLAS-------GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT---TGRSP- 72 (633)
Q Consensus 4 pdG~~LaSgs~DG~I~IWDl~t-------gk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl---~t~~~- 72 (633)
++..++++.+.+|.|+--.+.+ ++-+..+.-...+.+..+......+ .|+..+..|.++-+.. .....
T Consensus 5 ~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d-~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 5 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHD-TLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTC-EEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred cCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCC-EEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 6778999999999999865421 1222223322445555444444444 5666777888776654 22110
Q ss_pred -e-eE-----EeccCCCCeEEEEE-cC--CCCEEEEEeCCCeEEEEeCCC-------CceeeEeeCCCCeEEEEEecCCC
Q 006743 73 -K-VS-----WLKQHSAPTAGISF-SS--DDKIIASVGLDKKLYTYDPGS-------RRPSSCITYEAPFSSLAFIDDDW 135 (633)
Q Consensus 73 -~-v~-----~l~~H~~~VtsLaf-SP--dg~~LaSgS~DGtVrIWDlrt-------gk~v~~i~h~~~ItsLafSPdG~ 135 (633)
. +. .+. ....|.++.. .. +..+|+.++..|.++...+.. +.....+...+.+..+.......
T Consensus 84 a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 84 ARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDR 162 (370)
T ss_dssp SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCC
T ss_pred cCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCc
Confidence 0 11 122 2345555543 32 456899999999999987632 11112223455666666666667
Q ss_pred EEEEEEcCCeEEEEECC
Q 006743 136 ILTAGTSNGRVVFYDIR 152 (633)
Q Consensus 136 ~LatGs~DGsV~IWDlr 152 (633)
.|+..+.+|.+..++..
T Consensus 163 ~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 163 DVLLFASNGKTVRFGES 179 (370)
T ss_dssp EEEEEETTSEEEEEEGG
T ss_pred eEEEEeCCCeEEEEEcc
Confidence 88899999998888764
No 358
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=67.30 E-value=1.2e+02 Score=31.20 Aligned_cols=114 Identities=16% Similarity=0.168 Sum_probs=73.0
Q ss_pred CcEEEEEEcc--CCCeEEEEEeCCCeEEEEECCCCCc------eeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEe
Q 006743 38 QVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGRSP------KVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD 109 (633)
Q Consensus 38 ~~VssLafSp--dg~~lLaSGs~DGtI~IWDl~t~~~------~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWD 109 (633)
..+..+.... ++. +++..+.+|.|+.-.+..... ....++. ...+..+........|+..+.+|.+..+.
T Consensus 96 ~i~~~~~~~~~~~e~-~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 96 RIAQVIQIRGYTDAP-YLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CEEEEEEESSTTSSS-EEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred EEEEEEEeccCCCCC-EEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 4444444442 344 899999999999988743211 1122334 34555555555567888899999888776
Q ss_pred CC--C----Cc-----eeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 006743 110 PG--S----RR-----PSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (633)
Q Consensus 110 lr--t----gk-----~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs 153 (633)
.. . ++ ....+.....|.++...+++.+|+..+..|.++.-.+..
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred CcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 65 2 11 111223456677777776777999999999998887654
No 359
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=66.56 E-value=37 Score=42.34 Aligned_cols=139 Identities=12% Similarity=0.111 Sum_probs=88.9
Q ss_pred CCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEecCCCEEE
Q 006743 59 DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (633)
Q Consensus 59 DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h~~~ItsLafSPdG~~La 138 (633)
..+|.|-|+..+....+.... .-+.-.+|..+.|+.-. ..++.|+|+.+...+..+.....|.--.|-.+ +.|+
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~----AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~-~~l~ 120 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPIS----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVA 120 (1630)
T ss_pred CceEEEEECCCCCCccccccc----chhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCC-CeeE
Confidence 347888888776533222111 12234577777777665 67899999999888877776677777777644 3444
Q ss_pred EEEcCCeEEEEECCCCCCceEEEeecC--CCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEccCCC
Q 006743 139 AGTSNGRVVFYDIRGKPQPLTVLRACS--SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (633)
Q Consensus 139 tGs~DGsV~IWDlrs~~k~v~~l~~~~--H~~~VtsLafsPdg~~Las~s~~sd~~lLlSgs~Dg~IkIWDlr 209 (633)
..+ +..|+.|++.....|++++.... ....|..-..+++.++++..+-..+.. ...|.+.+|.+.
T Consensus 121 lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~-----~v~G~mQLyS~e 187 (1630)
T 1xi4_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQN-----RVVGAMQLYSVD 187 (1630)
T ss_pred EEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCC-----cccceeeeeecc
Confidence 444 35699999987667777666331 145577777788888876553322221 335777777553
No 360
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=65.44 E-value=1.9e+02 Score=32.97 Aligned_cols=174 Identities=10% Similarity=0.034 Sum_probs=88.3
Q ss_pred ccCCCCEEEEE-ECC----CcEEEEECCCCceeEE-EeCCCCC------cEEEEEEccCCCeEEEEE----------eCC
Q 006743 2 YNCKDEHLASI-SLS----GDLILHNLASGAKAAE-LKDPNEQ------VLRVLDYSRNSRHLLVTA----------GDD 59 (633)
Q Consensus 2 FSpdG~~LaSg-s~D----G~I~IWDl~tgk~v~~-~~~~~~~------~VssLafSpdg~~lLaSG----------s~D 59 (633)
++|++++++.+ +.. ..|+++|+.+++.+.. |....+. ....++|..++. ++++. +..
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~-~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDT-IIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTE-EEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCE-EEEEeCCCCCCcCcCCCC
Confidence 78999987764 333 3699999999876631 1100001 113357874433 44432 123
Q ss_pred CeEEEEECCCCCce-eEEeccCCCCe-EEEEEcCCCC-----EEEEEeCC---CeEEEEeCCC--CceeeEeeCCCCeEE
Q 006743 60 GTLHLWDTTGRSPK-VSWLKQHSAPT-AGISFSSDDK-----IIASVGLD---KKLYTYDPGS--RRPSSCITYEAPFSS 127 (633)
Q Consensus 60 GtI~IWDl~t~~~~-v~~l~~H~~~V-tsLafSPdg~-----~LaSgS~D---GtVrIWDlrt--gk~v~~i~h~~~Its 127 (633)
.+|+.|.+-+.... ...+.+....+ .....+++++ .+++.+.+ ..+++.|... ++.+.+.... ...
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~- 293 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS-DAT- 293 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT-TCE-
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC-cce-
Confidence 56899988654322 22333333333 2344455655 34444422 4567777654 3323332211 211
Q ss_pred EEEecCCCEEEEE----------EcCCeEEEEECCCC------CCceEEEeecCCCCCeeEEEEccC
Q 006743 128 LAFIDDDWILTAG----------TSNGRVVFYDIRGK------PQPLTVLRACSSSEAVSSLCWQRA 178 (633)
Q Consensus 128 LafSPdG~~LatG----------s~DGsV~IWDlrs~------~k~v~~l~~~~H~~~VtsLafsPd 178 (633)
+....++..++.. ...+.|.++|+.+. ....+.+-.......+..+.|..+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 360 (711)
T 4hvt_A 294 LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD 360 (711)
T ss_dssp EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS
T ss_pred EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC
Confidence 2344455555532 24677999998763 122333222334456777777764
No 361
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=63.10 E-value=89 Score=33.72 Aligned_cols=52 Identities=21% Similarity=0.177 Sum_probs=35.6
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCc---eeeEe----e------CCCCeEEEEEecC
Q 006743 82 APTAGISFSSDDK-IIASVGLDKKLYTYDPGSRR---PSSCI----T------YEAPFSSLAFIDD 133 (633)
Q Consensus 82 ~~VtsLafSPdg~-~LaSgS~DGtVrIWDlrtgk---~v~~i----~------h~~~ItsLafSPd 133 (633)
..-+.|+|.|++. .|+++...|.|++++..... .+..+ . .+.....|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4567899999985 56667789999999854321 12111 1 1456889999996
No 362
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=60.93 E-value=1.6e+02 Score=30.71 Aligned_cols=146 Identities=14% Similarity=0.165 Sum_probs=81.7
Q ss_pred CEEEEEECCCcEEEEECC---C------CceeEE-Ee-CCCCCcEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCC---
Q 006743 7 EHLASISLSGDLILHNLA---S------GAKAAE-LK-DPNEQVLRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRS--- 71 (633)
Q Consensus 7 ~~LaSgs~DG~I~IWDl~---t------gk~v~~-~~-~~~~~~VssLafSp-dg~~lLaSGs~DGtI~IWDl~t~~--- 71 (633)
+.|+..+..|.++-+... . |..+.. +. .....++..+.... +...+|+.++..|.++...+....
T Consensus 58 d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~ 137 (370)
T 3l6v_A 58 DTLLTFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRL 137 (370)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCC
T ss_pred CEEEEEeCCCeEEEEEHHHCcCCCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhccc
Confidence 456667777776665532 1 211111 11 11234444444432 123378999999999998863211
Q ss_pred ---ceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC----C---ceeeE--eeCCCCeEEEEEec-------
Q 006743 72 ---PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS----R---RPSSC--ITYEAPFSSLAFID------- 132 (633)
Q Consensus 72 ---~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrt----g---k~v~~--i~h~~~ItsLafSP------- 132 (633)
.....+.. ...+..+........|+..+.+|.+..++... + +-+.. +.....|.++...+
T Consensus 138 ~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~ 216 (370)
T 3l6v_A 138 ARGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVED 216 (370)
T ss_dssp TTCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----
T ss_pred CCceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccc
Confidence 11112333 34555555555566788888899888886532 1 11222 23445666665554
Q ss_pred ----------------------------CCCEEEEEEcCCeEEEEECCC
Q 006743 133 ----------------------------DDWILTAGTSNGRVVFYDIRG 153 (633)
Q Consensus 133 ----------------------------dG~~LatGs~DGsV~IWDlrs 153 (633)
++..|++.+..|..+...+..
T Consensus 217 ~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 217 EVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp ------------------------------CEEEEEETTSEEEEEEGGG
T ss_pred ccccccccccccccccccccccccccccCCceEEEeeCCCCEEEEEHHH
Confidence 456889999999988887754
No 363
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=57.32 E-value=1.1e+02 Score=32.93 Aligned_cols=103 Identities=12% Similarity=0.086 Sum_probs=58.6
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCCC--ceeEEec---------cCCCCeEEEEEcCC----CCEEEEEeC--C
Q 006743 40 LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS--PKVSWLK---------QHSAPTAGISFSSD----DKIIASVGL--D 102 (633)
Q Consensus 40 VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~--~~v~~l~---------~H~~~VtsLafSPd----g~~LaSgS~--D 102 (633)
-..|+|.|+++..|+.+...|.|++++..... ..+..+. ........|+|+|+ +.+.++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 34689999985235556788999999764321 1112111 11456889999995 444333322 1
Q ss_pred ----------CeEEEEeCCCC----------ceeeEee---CCCCeEEEEEecCCCEEEEEEc
Q 006743 103 ----------KKLYTYDPGSR----------RPSSCIT---YEAPFSSLAFIDDDWILTAGTS 142 (633)
Q Consensus 103 ----------GtVrIWDlrtg----------k~v~~i~---h~~~ItsLafSPdG~~LatGs~ 142 (633)
..|.-|.+..+ +.+..+. .......|+|.|||++.++.+.
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 13444555321 1222221 2345788999999977666554
No 364
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=49.77 E-value=2.2e+02 Score=28.75 Aligned_cols=101 Identities=10% Similarity=0.111 Sum_probs=67.2
Q ss_pred EEEEEeCCCeEEEEECCCCC------ceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC----C---ceeeE
Q 006743 52 LLVTAGDDGTLHLWDTTGRS------PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS----R---RPSSC 118 (633)
Q Consensus 52 lLaSGs~DGtI~IWDl~t~~------~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrt----g---k~v~~ 118 (633)
+|+..+.+|.++...+..-. .....+.. .+.+..+....+...++..+.+|.+..+.... + +-+..
T Consensus 116 ~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~ 194 (312)
T 1suu_A 116 YLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCG 194 (312)
T ss_dssp EEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEEC
T ss_pred EEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEe
Confidence 68888999999998873221 11122333 45666666555566788999999988887642 1 11222
Q ss_pred e--eCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 006743 119 I--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (633)
Q Consensus 119 i--~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs 153 (633)
+ .....|..+..-.++..|++.+..|.++..++..
T Consensus 195 i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 195 MKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp CCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 2 3455677776666677888999999999888754
No 365
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=47.85 E-value=2.5e+02 Score=28.84 Aligned_cols=144 Identities=13% Similarity=0.179 Sum_probs=79.5
Q ss_pred CEEEEEECCCcEEEEECCCC-c----------eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC----
Q 006743 7 EHLASISLSGDLILHNLASG-A----------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---- 71 (633)
Q Consensus 7 ~~LaSgs~DG~I~IWDl~tg-k----------~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~---- 71 (633)
.+.+.-..||.|+.|-.... + ....+.......+..++++.-.. ..+.-..||.|+.|-.....
T Consensus 63 ~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~-h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 63 QTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK-HCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCS-EEEEEETTSCEEEEECCGGGTTCS
T ss_pred CeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCC-eEEEEcCCCCEEEEeCCCCCcCCC
Confidence 34455678899999975431 1 11122211233445556655444 45556789999999653211
Q ss_pred ------ceeEEecc-CCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC-Cc-------e---eeEee--CCCCeEEEEEe
Q 006743 72 ------PKVSWLKQ-HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-RR-------P---SSCIT--YEAPFSSLAFI 131 (633)
Q Consensus 72 ------~~v~~l~~-H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrt-gk-------~---v~~i~--h~~~ItsLafS 131 (633)
..-..+.. ....|..|+.- ..+.+....||.|+.|-... ++ . ...+. ....|..++..
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 00111111 12256666554 55667778899999997532 11 0 01111 23456666654
Q ss_pred cCCCEEEEEEcCCeEEEEECCC
Q 006743 132 DDDWILTAGTSNGRVVFYDIRG 153 (633)
Q Consensus 132 PdG~~LatGs~DGsV~IWDlrs 153 (633)
......++-..||.|+.|-...
T Consensus 220 ~g~~~t~~l~~~G~v~~wG~n~ 241 (389)
T 3kci_A 220 SGDAQTLCLTDDDTVWSWGDGD 241 (389)
T ss_dssp CSSCEEEEEETTTEEEEEECCG
T ss_pred CCCcEEEEEccCCEEEEEeCCC
Confidence 4335677778899999997653
No 366
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=41.54 E-value=67 Score=36.07 Aligned_cols=57 Identities=16% Similarity=0.306 Sum_probs=42.8
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CeEEEEeCCCCceeeEe--eCCCCeEEEEEecCCCEEEEE
Q 006743 84 TAGISFSSDDKIIASVGLD------------KKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAG 140 (633)
Q Consensus 84 VtsLafSPdg~~LaSgS~D------------GtVrIWDlrtgk~v~~i--~h~~~ItsLafSPdG~~LatG 140 (633)
.-.|+|+|.|+++++-..+ ..+.+.+..+++..+.+ .....++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4668999999977765533 35677788888776655 356789999999999887765
No 367
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=40.47 E-value=3.5e+02 Score=28.43 Aligned_cols=162 Identities=11% Similarity=0.120 Sum_probs=94.3
Q ss_pred cEEEEECCCC--ceeEEEeCC-----CCCcEEEEEEc---cC---CCeEEEEEe-CCCeEEEEECCCCCceeEEec----
Q 006743 17 DLILHNLASG--AKAAELKDP-----NEQVLRVLDYS---RN---SRHLLVTAG-DDGTLHLWDTTGRSPKVSWLK---- 78 (633)
Q Consensus 17 ~I~IWDl~tg--k~v~~~~~~-----~~~~VssLafS---pd---g~~lLaSGs-~DGtI~IWDl~t~~~~v~~l~---- 78 (633)
+|.+||+.++ +.++.+.-. ....+..+++. +. ++.+++... ...-|.|||+.+++.. +.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~sw-Rv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSW-NVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEE-EEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEE-EEccCCCc
Confidence 6889999999 888877642 23456777777 22 133444444 4678999999876522 1110
Q ss_pred ----------cC----CCCeEEEEEcCC----CCEEEEEeCCC-eEEEEe---CCC---CceeeEeeCC---CCeEEEEE
Q 006743 79 ----------QH----SAPTAGISFSSD----DKIIASVGLDK-KLYTYD---PGS---RRPSSCITYE---APFSSLAF 130 (633)
Q Consensus 79 ----------~H----~~~VtsLafSPd----g~~LaSgS~DG-tVrIWD---lrt---gk~v~~i~h~---~~ItsLaf 130 (633)
+. ...|..|+++|+ ++.|+-....+ .++-.. +++ ...+..++.. .....+++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 10 246888999987 67777766555 333332 222 2233444433 33445677
Q ss_pred e-cCCCEEEEEEcCCeEEEEECCC-CC--CceEEEeecCCCCCeeEEEEccCC
Q 006743 131 I-DDDWILTAGTSNGRVVFYDIRG-KP--QPLTVLRACSSSEAVSSLCWQRAK 179 (633)
Q Consensus 131 S-PdG~~LatGs~DGsV~IWDlrs-~~--k~v~~l~~~~H~~~VtsLafsPdg 179 (633)
+ .+|.++++--....|..|+..+ .- .-..++..-..-..+..+.+..+|
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g 335 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKG 335 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTS
T ss_pred eCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCC
Confidence 6 5676677777788899999886 21 112333221233456667665543
No 368
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=35.12 E-value=1.2e+02 Score=33.99 Aligned_cols=60 Identities=13% Similarity=0.273 Sum_probs=44.6
Q ss_pred CCeEEEEEcCCCCEEEEEeC------------CCeEEEEeCCCCceeeEee--CCCCeEEEEEecCCCEEEEEE
Q 006743 82 APTAGISFSSDDKIIASVGL------------DKKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAGT 141 (633)
Q Consensus 82 ~~VtsLafSPdg~~LaSgS~------------DGtVrIWDlrtgk~v~~i~--h~~~ItsLafSPdG~~LatGs 141 (633)
.....|+|.++|.+.++... .+.|..+|..+++....+. ....++.++|+||++.|++.-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34578999999988774432 2268888888888766653 346789999999999887764
No 369
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=34.93 E-value=28 Score=42.02 Aligned_cols=38 Identities=21% Similarity=0.256 Sum_probs=32.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEee
Q 006743 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT 120 (633)
Q Consensus 83 ~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~ 120 (633)
.|.+++..++..++++.+.|+++||||+.+++++....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45556666788999999999999999999999887654
No 370
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=33.23 E-value=3.6e+02 Score=26.42 Aligned_cols=101 Identities=12% Similarity=0.051 Sum_probs=59.4
Q ss_pred EEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEe---CCC----Ccee-eE--eeC
Q 006743 52 LLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD---PGS----RRPS-SC--ITY 121 (633)
Q Consensus 52 lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWD---lrt----gk~v-~~--i~h 121 (633)
.+++.+.+|.|+--...........++... .+..+........|+..+..|.++.+. +.. |.++ .. +..
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D-~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~ 82 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGD-SFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPP 82 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTC-CEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCT
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCC-EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCC
Confidence 566778888887666543221111234443 344444433455677778888766554 421 2222 11 234
Q ss_pred CCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 006743 122 EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (633)
Q Consensus 122 ~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs 153 (633)
...|.++....++.+|+.++.+|.++...+..
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e 114 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFND 114 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGG
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHH
Confidence 55677774434667888999999999988754
No 371
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=32.76 E-value=3.9e+02 Score=26.75 Aligned_cols=146 Identities=12% Similarity=0.114 Sum_probs=84.4
Q ss_pred CCCEEEEEECCCcEEEEECCC-------CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc-----
Q 006743 5 KDEHLASISLSGDLILHNLAS-------GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP----- 72 (633)
Q Consensus 5 dG~~LaSgs~DG~I~IWDl~t-------gk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~----- 72 (633)
++.+++.++.+|.++-..+.. +.....+.. ....+.. ......+ .++..+.+|.+..+....-..
T Consensus 108 ~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~-~d~lv~~-~~~~~~~-~i~l~T~~G~~irf~~~~v~~~gr~a 184 (307)
T 1zi0_A 108 EGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVD-GDELIGV-DLTSGED-EVMLFSAEGKVVRFKESSVRAMGCNT 184 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCT-TCCEEEE-EEECTTC-EEEEEETTSEEEEEEGGGSCBCCTTC
T ss_pred CCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECC-CCEEEEE-EEeCCCC-EEEEECCCCcEEEEEHHHcCccCCCC
Confidence 456788899999999887642 112222332 2444443 3333333 577788889988887632110
Q ss_pred -eeEEec-cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC-------CceeeEe---eCCCCeEEEEEecCCCEEEEE
Q 006743 73 -KVSWLK-QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-------RRPSSCI---TYEAPFSSLAFIDDDWILTAG 140 (633)
Q Consensus 73 -~v~~l~-~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrt-------gk~v~~i---~h~~~ItsLafSPdG~~LatG 140 (633)
-+..+. .....|.++....++..++..+..|.++..++.. ++-+..+ ...+.+..+....+...|+..
T Consensus 185 ~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~ 264 (307)
T 1zi0_A 185 TGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMI 264 (307)
T ss_dssp CCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEE
T ss_pred CCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEE
Confidence 122111 2335677766555566799999999999887732 1112222 123555555544445667777
Q ss_pred EcCCeEEEEECCC
Q 006743 141 TSNGRVVFYDIRG 153 (633)
Q Consensus 141 s~DGsV~IWDlrs 153 (633)
+.+|.+.-+++..
T Consensus 265 t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 265 TDAGTLVRTRVSE 277 (307)
T ss_dssp ESSCCEEEEEGGG
T ss_pred cCCCcEEEEeccc
Confidence 7778776666554
No 372
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=31.52 E-value=91 Score=34.97 Aligned_cols=55 Identities=11% Similarity=0.132 Sum_probs=39.7
Q ss_pred CccCCCCEEEEEECC------------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEE
Q 006743 1 MYNCKDEHLASISLS------------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVT 55 (633)
Q Consensus 1 AFSpdG~~LaSgs~D------------G~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaS 55 (633)
+|+++|++++.-..+ +.+.+.+..+++..+.+.++....++.++|+||++.+|+.
T Consensus 482 ~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 482 GFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred EECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 477888866544322 2456667777888777778788899999999999855554
No 373
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=31.24 E-value=3.8e+02 Score=26.18 Aligned_cols=143 Identities=13% Similarity=0.064 Sum_probs=82.2
Q ss_pred CEEEEEECCCcEEEEECCCCce-eEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC---CCCce------eEE
Q 006743 7 EHLASISLSGDLILHNLASGAK-AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT---GRSPK------VSW 76 (633)
Q Consensus 7 ~~LaSgs~DG~I~IWDl~tgk~-v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~---t~~~~------v~~ 76 (633)
..+++.+.+|.|+--....-.. ...++ ..+.+..+......+ .|+..+..|.++-+... ..... ...
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~lk--e~D~l~~~~~~~t~~-~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~ 79 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLNYK--AGDSFKAAVKGKSNQ-PVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLT 79 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSCCC--TTCCEEEEEEEETTS-CEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCC
T ss_pred CEEEEEeCCCEEEEeeCCcCCceeccCC--CCCEEEEEEEeCCCC-EEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeec
Confidence 4567788999888766533211 11122 233333333333333 46666788887665542 11111 011
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC-------CceeeEeeCCCCeEEEEEe-cCCCEEEEEEcCCeEEE
Q 006743 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-------RRPSSCITYEAPFSSLAFI-DDDWILTAGTSNGRVVF 148 (633)
Q Consensus 77 l~~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrt-------gk~v~~i~h~~~ItsLafS-PdG~~LatGs~DGsV~I 148 (633)
+. ....|.++....++.+|+.++..|.++...+.. +.....+...+.+..+... .++..|+..+.+|.+..
T Consensus 80 L~-~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lr 158 (256)
T 1zvt_A 80 LP-PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLM 158 (256)
T ss_dssp CC-TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEE
T ss_pred CC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEE
Confidence 22 235676664434667788999999999987632 2222233334556555555 35668899999999988
Q ss_pred EECCC
Q 006743 149 YDIRG 153 (633)
Q Consensus 149 WDlrs 153 (633)
++...
T Consensus 159 f~~~e 163 (256)
T 1zvt_A 159 FPVSD 163 (256)
T ss_dssp EEGGG
T ss_pred EEHHH
Confidence 88764
No 374
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=30.01 E-value=4.6e+02 Score=26.73 Aligned_cols=143 Identities=13% Similarity=0.114 Sum_probs=77.0
Q ss_pred CCEEEEEECCCcEEEEECCCC-c----------eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC---
Q 006743 6 DEHLASISLSGDLILHNLASG-A----------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS--- 71 (633)
Q Consensus 6 G~~LaSgs~DG~I~IWDl~tg-k----------~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~--- 71 (633)
..+.+....||.|+.|-.... + ....+.......|..|+.. .. ..++-..||.|+.|-.....
T Consensus 116 ~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~-hs~alt~~G~v~~wG~n~~GqLG 192 (389)
T 3kci_A 116 GKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GA-HSACVTAAGDLYTWGKGRYGRLG 192 (389)
T ss_dssp CSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SS-EEEEEETTSCEEEEECCGGGTTC
T ss_pred CCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cC-eEEEEeCCCeEEEeCCCCCCCcC
Confidence 345566678999999965321 1 1112221122234444443 23 34556789999999653210
Q ss_pred -----c--eeEEec-cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC-Cc---------ee-eEee--CCCCeEEEEE
Q 006743 72 -----P--KVSWLK-QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-RR---------PS-SCIT--YEAPFSSLAF 130 (633)
Q Consensus 72 -----~--~v~~l~-~H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrt-gk---------~v-~~i~--h~~~ItsLaf 130 (633)
. .-..+. .....|..++.-....+.+....|+.|+.|-... ++ .. ..+. ....|..++.
T Consensus 193 ~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~ 272 (389)
T 3kci_A 193 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 272 (389)
T ss_dssp SSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred CCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeC
Confidence 0 011111 1234566666544346777778899999996532 11 01 1111 1224666655
Q ss_pred ecCCCEEEEEEcCCeEEEEECCC
Q 006743 131 IDDDWILTAGTSNGRVVFYDIRG 153 (633)
Q Consensus 131 SPdG~~LatGs~DGsV~IWDlrs 153 (633)
- ....++-..||.|+.|-...
T Consensus 273 G--~~hs~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 273 G--SQFSVALTKSGAVYTWGKGD 293 (389)
T ss_dssp E--TTEEEEEETTSCEEEEECCG
T ss_pred C--CCEEEEEeCCCeEEEEeCCC
Confidence 4 34555667899999997653
No 375
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=29.27 E-value=4.2e+02 Score=25.99 Aligned_cols=133 Identities=11% Similarity=0.082 Sum_probs=70.4
Q ss_pred EEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEE
Q 006743 9 LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGIS 88 (633)
Q Consensus 9 LaSgs~DG~I~IWDl~tgk~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~~v~~l~~H~~~VtsLa 88 (633)
.+.-. ||.|+.|-......+. +.......|..|+.... +.++. . ||.|+.|-.......- .-..-...|..++
T Consensus 36 ~~~l~-~G~v~~wG~n~~Gqlg-~p~~~~~~i~~ia~G~~--hs~~l-~-~G~v~~wG~n~~Gqlg-~P~~~~~~v~~ia 108 (282)
T 3qhy_B 36 GLALK-GGKVLGWGANLNGQLT-MPAATQSGVDAIAAGNY--HSLAL-K-DGEVIAWGGNEDGQTT-VPAEARSGVDAIA 108 (282)
T ss_dssp EEEEE-TTEEEEEECCSSSTTS-CCGGGGSCCCEEEECSS--EEEEE-E-TTEEEEEECCTTSTTC-CCGGGSSSEEEEE
T ss_pred EEEEE-CCEEEEEeCCCCCCCC-CCccCCCCEEEEEeCCC--EEEEE-E-CCEEEEeeCCCCCCCC-CCcccCCCeEEEE
Confidence 33345 8999999765422111 01001223444554433 44555 4 8999999875332110 0111134677777
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCC-CceeeEeeCCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 006743 89 FSSDDKIIASVGLDKKLYTYDPGS-RRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (633)
Q Consensus 89 fSPdg~~LaSgS~DGtVrIWDlrt-gk~v~~i~h~~~ItsLafSPdG~~LatGs~DGsV~IWDlrs~ 154 (633)
.-. .+.+... ||.|+.|-... ++.-........|..++.-.+ ..+.-. ||.|+.|-....
T Consensus 109 ~G~--~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~ 169 (282)
T 3qhy_B 109 AGA--WASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYF 169 (282)
T ss_dssp EET--TEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTT
T ss_pred CcC--CEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCC
Confidence 663 3444445 99999997654 222111123345666665433 223333 799999987654
No 376
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=28.98 E-value=67 Score=37.02 Aligned_cols=37 Identities=11% Similarity=0.022 Sum_probs=30.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeEeeC
Q 006743 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY 121 (633)
Q Consensus 83 ~VtsLafSPdg~~LaSgS~DGtVrIWDlrtgk~v~~i~h 121 (633)
.|.++.+ +..++++.+.|+++|+||+++++++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555544 478999999999999999999998877654
No 377
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=27.17 E-value=5.3e+02 Score=26.49 Aligned_cols=140 Identities=12% Similarity=0.093 Sum_probs=74.2
Q ss_pred CEEEEEECCCcEEEEECCCC-c----------eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc---
Q 006743 7 EHLASISLSGDLILHNLASG-A----------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP--- 72 (633)
Q Consensus 7 ~~LaSgs~DG~I~IWDl~tg-k----------~v~~~~~~~~~~VssLafSpdg~~lLaSGs~DGtI~IWDl~t~~~--- 72 (633)
.+.+....||.|+.|-.... + ....+.......|..|+... . ..++-..||.|+.|-......
T Consensus 131 ~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~--~-hs~alt~~G~v~~wG~n~~GqlG~ 207 (406)
T 4d9s_A 131 SHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGA--E-HTAAVTEDGDLYGWGWGRYGNLGL 207 (406)
T ss_dssp SEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECS--S-EEEEEETTSCEEEEECCTTSTTCS
T ss_pred hheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecCC--C-eEEEEeCCCCEEEeeCCCCCCCCC
Confidence 34455678999999975431 1 11112211222444454432 2 455567899999996532110
Q ss_pred -------eeEEecc-CCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-ce-------e---eEee--CCCCeEEEEEe
Q 006743 73 -------KVSWLKQ-HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR-RP-------S---SCIT--YEAPFSSLAFI 131 (633)
Q Consensus 73 -------~v~~l~~-H~~~VtsLafSPdg~~LaSgS~DGtVrIWDlrtg-k~-------v---~~i~--h~~~ItsLafS 131 (633)
.-..+.. ....|..++.- ..+.+....||.|+.|-.... +. . ..+. ....|..++.-
T Consensus 208 g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G 285 (406)
T 4d9s_A 208 GDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG 285 (406)
T ss_dssp SSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEec
Confidence 0111111 12356666544 455666678999999975421 11 0 1111 22345555543
Q ss_pred cCCCEEEEEEcCCeEEEEECCC
Q 006743 132 DDDWILTAGTSNGRVVFYDIRG 153 (633)
Q Consensus 132 PdG~~LatGs~DGsV~IWDlrs 153 (633)
....++-..||.|+.|=...
T Consensus 286 --~~hs~alt~~G~v~~wG~n~ 305 (406)
T 4d9s_A 286 --WRHTMALTSDGKLYGWGWNK 305 (406)
T ss_dssp --SSEEEEEETTSCEEEEECCT
T ss_pred --CCEEEEEcCCCeEEEeeCCC
Confidence 44556667899999997654
No 378
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=24.10 E-value=3.3e+02 Score=23.03 Aligned_cols=18 Identities=11% Similarity=0.041 Sum_probs=11.3
Q ss_pred CCEEEEEECCCcEEEEEC
Q 006743 6 DEHLASISLSGDLILHNL 23 (633)
Q Consensus 6 G~~LaSgs~DG~I~IWDl 23 (633)
|.+.+.-..||.+.+|+.
T Consensus 24 g~~~L~~q~dGNLvL~~~ 41 (113)
T 3mez_B 24 RDYSLVMRDDCNLVLTKG 41 (113)
T ss_dssp TTEEEEECTTSCEEEEET
T ss_pred CCEEEEEcCCCEEEEEEC
Confidence 444455566777777764
No 379
>1eoq_A GAG polyprotein capsid protein P27; virus/viral protein; NMR {Rous sarcoma virus - prague C} SCOP: a.28.3.1
Probab=21.08 E-value=8.8 Score=32.83 Aligned_cols=62 Identities=24% Similarity=0.345 Sum_probs=33.3
Q ss_pred CCCCcchhhhcccccCCcccc---------------CCC------cc-cCCChhhHHHHHhhcccccccccccCCCCCCc
Q 006743 495 REPRRTYAERISTTSGTSLSV---------------GSP------KT-KKTGAETKEELLSNFLSRSDTSAVVEPGIPPA 552 (633)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~---------------~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (633)
+|||..|.+|.-.+....-+. ..| |. ++||+ |-||+..-++.+.|+..+.--|+--|
T Consensus 8 kEPFrDyVdRf~kalraeqa~~~vK~wmt~tLlvQNANPdCk~iLkal~g~~~-tl~em~~yi~~~~d~gP~~~qg~aAA 86 (96)
T 1eoq_A 8 SESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLT-TPGEIIKYVLDRQKTAPLTDQGIAAA 86 (96)
T ss_dssp TCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHSCHHHHHHHHHCCSCCC-SHHHHHHHHHHHSCCCC---------
T ss_pred CCcHHHHHHHHHHHHHHhhccHhHhhhhHHHHHHHhcCHHHHHHHHccCCCCC-CHHHHHHHHHHHHhhChHHHHHHHHH
Confidence 699999999977665332111 112 22 36666 66999999999999976666666555
Q ss_pred cCCCC
Q 006743 553 INGGM 557 (633)
Q Consensus 553 ~~~~~ 557 (633)
+-|.+
T Consensus 87 ~~g~~ 91 (96)
T 1eoq_A 87 MSSAI 91 (96)
T ss_dssp -----
T ss_pred HHHhh
Confidence 55543
Done!