BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006744
(632 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SVH3|PP328_ARATH Pentatricopeptide repeat-containing protein At4g20740
OS=Arabidopsis thaliana GN=At4g20740 PE=3 SV=1
Length = 727
Score = 598 bits (1541), Expect = e-170, Method: Compositional matrix adjust.
Identities = 339/722 (46%), Positives = 438/722 (60%), Gaps = 91/722 (12%)
Query: 2 PPQTPQRPPKPYFFYGHRKPSQNRPTVYGGLF--------------SNRQSLRNPN---- 43
PP + KP FF+GHRKPSQNRPTVYGGLF SN + R P
Sbjct: 6 PPNLSDKSLKPNFFHGHRKPSQNRPTVYGGLFSNRQSIPRVSPQPQSNSLAHRTPFDLRK 65
Query: 44 -------------------SASEPHQSPPF---------NVQKWDPHY---LPNQKTQSP 72
SA+ SP N W P L + +P
Sbjct: 66 WDPETHLPPPSPPSHSTVISAASERLSPIARFVLDAFRKNRNHWGPSVVSELNKLRRVTP 125
Query: 73 PSDPKTFQLQRHLSPIARFI---------------TDAF-----RKNQFQWGPQVVTELS 112
+ +L + A+F +AF R F+ Q+ +
Sbjct: 126 SIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMD 185
Query: 113 KLRRVTPDLVAEVL---KVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFR 169
R + E+L +N L + + K+ G+K YN + L +N F
Sbjct: 186 SQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFD 245
Query: 170 AADQVPELMDSQG-------------------RIAEMLEILEKMRRNLCKPDVFAYTAMI 210
A V E G RI EMLEIL++MR NLCKPDVFAYTAMI
Sbjct: 246 LALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMI 305
Query: 211 RVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGIL 270
+ L +E NLDA LRVW+EM++D ++ DVMAY TL++GLCK GRV RG+ELF EMK IL
Sbjct: 306 KTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQIL 365
Query: 271 IDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKL 330
IDR IY VLIEG V +GKV AC+L +DLVDSGY AD+GIYN++I GLC V Q DKAYKL
Sbjct: 366 IDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKL 425
Query: 331 FEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGK 390
F+V ++++L PDF T++P++V M R+ +F +L ++ +L + V+ L +FF+ L
Sbjct: 426 FQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCAD 485
Query: 391 EERIMMALDVFEELKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSF 450
EE+ MALDVF LK KG+ SV +YNILM AL ++G+++K+L LF +MR L E +S S+
Sbjct: 486 EEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSY 545
Query: 451 SIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLG 510
SIAI C VE GD+ AC H KIIEMS VPS+AAY LTKGLC+IGEIDA M+LVR+CLG
Sbjct: 546 SIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLG 605
Query: 511 NVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLE 570
NV SGP EFKYALT+ HVC+ AEK+++V++EM QEG NEVI AIISGM KHGT++
Sbjct: 606 NVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIK 665
Query: 571 EARKVFTNLRERKLLTEANTIVYDEILIEHMKKKTADLVLSGLKFFGLESKLKAKGCKLL 630
AR+VFT L++RK++TEA+ +VY+E+LIE KKKTADLVLSG+KFFGLESKL+AKGC+LL
Sbjct: 666 VAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGIKFFGLESKLRAKGCRLL 725
Query: 631 SS 632
+
Sbjct: 726 DN 727
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 152/625 (24%), Positives = 268/625 (42%), Gaps = 86/625 (13%)
Query: 45 ASEPHQSPPFN------VQKWDPHYLPNQKTQSPPSDPKTFQLQRHLSPIARFITDAFRK 98
+S PH S F VQ + +PN + P + ++L R P R + + F +
Sbjct: 16 SSLPHLSQRFKQTENEIVQMFS---VPNHEESEKPQEK--WKLSRK-DPSVRMLDERFIR 69
Query: 99 --NQFQWGPQVVTELSKLR-RVTPDLVAEVLKVENNPTLASKFFHWAGKQKGYKHNFASY 155
F+WGP L L+ +V LV +L+++ + +FF WAGK++ ++H+ ++Y
Sbjct: 70 IVKIFKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTY 129
Query: 156 NALAYCLSRNNLF----RAADQV-------------PELMDSQGR---IAEMLEILEKMR 195
L CL L+ R +V EL+ + GR +++ L + + +
Sbjct: 130 MTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAK 189
Query: 196 RNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEM-KKDLVEADVMAYVTLIMGLCKGGRV 254
CKP Y ++I +L E + V+ EM + D + Y LI K GR
Sbjct: 190 GRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRN 249
Query: 255 VRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSI 314
LF EMK+N + IY L+ GKV KA DL +++ +G + Y +
Sbjct: 250 DSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTEL 309
Query: 315 IGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQM----- 369
I GL + + D+AY ++ ++D L PD +N L+ ++GR++ + ++M
Sbjct: 310 IKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 370 ----------------------------EKLKFSVAADLEKFFEFLVG---KEERIMMAL 398
+K+K + E + L+ K R+ AL
Sbjct: 370 TPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKAL 429
Query: 399 DVFEELKGKGYSSVP-IYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCH 457
+ EE+ KG+ P Y L+ AL + + A LF +++ V+S +++ I+
Sbjct: 430 LLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHF 489
Query: 458 VESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRD-----CLGNV 512
+ G + EA + N++ P V AYN L G+ K G I+ A L+R C ++
Sbjct: 490 GKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADI 549
Query: 513 ASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEA 572
S + + + R+G + IE+ + G P+ V + ++ G EEA
Sbjct: 550 NS------HNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEA 603
Query: 573 RKVFTNLRERKLLTEANTIVYDEIL 597
++ ++++ E + I Y IL
Sbjct: 604 ARMMREMKDKGF--EYDAITYSSIL 626
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 71/140 (50%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAY 241
G+++E +++ +M+ PDV+AY A++ + ++ + +M+++ AD+ ++
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSH 552
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
++ G + G R E+F +K +GI D Y L+ G +A +++++ D
Sbjct: 553 NIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD 612
Query: 302 SGYRADLGIYNSIIGGLCRV 321
G+ D Y+SI+ + V
Sbjct: 613 KGFEYDAITYSSILDAVGNV 632
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/514 (25%), Positives = 225/514 (43%), Gaps = 33/514 (6%)
Query: 103 WGPQVVTELSKLR-RVTPDLVAEVLKVENNPTLASKFFHWAGKQKGYKHNFASYNALAYC 161
WGP LS L + P+ V VL+ + A ++F W ++ H SYN+L
Sbjct: 48 WGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLV 107
Query: 162 LSRNNLFRAADQVPELMDSQG-------------------RIAEMLEILEKMRRNLCKPD 202
++R F A DQ+ M G ++ E ++++ MR+ +P
Sbjct: 108 MARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPA 167
Query: 203 VFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFR 262
AYT +I +A + D L ++++M++ E V + TLI G K GRV L
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227
Query: 263 EMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVK 322
EMK + + D +Y V I+ GKV A ++ +G + D Y S+IG LC+
Sbjct: 228 EMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287
Query: 323 QFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLE- 381
+ D+A ++FE ++ P N +++ G+ D + LL + ++ K S+ + +
Sbjct: 288 RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL-ERQRAKGSIPSVIAY 346
Query: 382 KFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGL 441
+ K ++ AL VFEE+K ++ YNIL+ L G++ A L M+
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKA 406
Query: 442 NLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAA 501
L N + +I + +S + EAC ++ P + L GL K+G +D A
Sbjct: 407 GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 502 M-----MLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVIC 556
ML DC N Y I + G E ++ +M + C P+ +
Sbjct: 467 YKVYEKMLDSDCRTN------SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 557 SAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
+ + M K G E+ R +F ++ R+ + +A +
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 221/500 (44%), Gaps = 47/500 (9%)
Query: 114 LRRVTPDLVAEVLKVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQ 173
L V D +V KV+ +A KFFH + G K + +Y ++ L + N A +
Sbjct: 240 LYNVCIDSFGKVGKVD----MAWKFFHEI-EANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 174 VPELMD-------------------SQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLA 214
+ E ++ S G+ E +LE+ R P V AY ++ L
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLR 354
Query: 215 AERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRA 274
+D L+V+EEMKKD ++ Y LI LC+ G++ EL M++ G+ +
Sbjct: 355 KMGKVDEALKVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVR 413
Query: 275 IYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVT 334
++++ L K+ +AC + +++ D + S+I GL +V + D AYK++E
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Query: 335 VQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFL-----VG 389
+ D + L+ GR ++ K+ M + + + DL+ ++ G
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM--INQNCSPDLQLLNTYMDCMFKAG 531
Query: 390 KEERIMMALDVFEELKGKGYSSVP---IYNILMGALLEIGEVKKALYLFGKMRGLNLEVN 446
+ E+ +FEE+K + + VP Y+IL+ L++ G + LF M+ ++
Sbjct: 532 EPEK---GRAMFEEIKARRF--VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586
Query: 447 SLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVR 506
+ +++I I + G + +A + ++ P+V Y + GL KI +D A ML
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 507 DCLGNVASGPTEFK---YALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGM 563
+ S E Y+ I + G ++ +L E+ Q+G PN ++++ +
Sbjct: 647 E----AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Query: 564 CKHGTLEEARKVFTNLRERK 583
K + EA F +++E K
Sbjct: 703 VKAEEINEALVCFQSMKELK 722
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 170/401 (42%), Gaps = 2/401 (0%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAY 241
GR+ + ++ EKM + C+ + YT++I+ + +++++M D+
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
T + + K G +G +F E+K + D Y +LI GL+ G + +L + +
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDN 361
G D YN +I G C+ + +KAY+L E P T ++ A++ R+D
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 362 FFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMG 420
+ L + + + + + GK RI A + EEL KG + ++ +N L+
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 421 ALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVP 480
AL++ E+ +AL F M+ L N +++ I I + +A ++ + P
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 481 SVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEV 540
S +Y + GL K G I A L N P Y I + A +
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKAN-GGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Query: 541 LNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRE 581
E + G P + C ++ + K+ LE+A V LRE
Sbjct: 820 FEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRE 860
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 187/408 (45%), Gaps = 6/408 (1%)
Query: 176 ELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVE 235
+++ G++ E+ + M++ P+V M+ L + LD ++EEM +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 236 ADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDL 295
D + + +LI GL K GRV ++++ +M ++ + +Y LI+ G+ +
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 296 LKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAE 355
KD+++ DL + N+ + + + + +K +FE PD + + L+ +
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 356 MGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SV 412
G + ++L M++ D + + G K ++ A + EE+K KG+ +V
Sbjct: 565 AGFANETYELFYSMKEQ--GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 413 PIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNK 472
Y ++ L +I + +A LF + + +E+N + +S I + G I EA +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 473 IIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSG 532
+++ P++ +N L L K EI+ A++ + + + P + Y + I +C+
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS-MKELKCTPNQVTYGILINGLCKVR 741
Query: 533 EAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLR 580
+ K EM ++G P+ + + +ISG+ K G + EA +F +
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 152/316 (48%), Gaps = 5/316 (1%)
Query: 180 SQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVM 239
+ GR + +I + M C PD+ + + + ++EE+K D
Sbjct: 494 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Query: 240 AYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDL 299
+Y LI GL K G +ELF MKE G ++D Y ++I+G GKV KA LL+++
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 300 VDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRM 359
G+ + Y S+I GL ++ + D+AY LFE + + + L+ ++GR+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 360 DNFFKLLAQMEKLKFSVAADLEKFFEFL--VGKEERIMMALDVFEELKG-KGYSSVPIYN 416
D + +L ++ ++ + +L + L + K E I AL F+ +K K + Y
Sbjct: 674 DEAYLILEEL--MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731
Query: 417 ILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEM 476
IL+ L ++ + KA + +M+ ++ +++S++ I ++G+I EA ++
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Query: 477 SQVPSVAAYNCLTKGL 492
VP A YN + +GL
Sbjct: 792 GGVPDSACYNAMIEGL 807
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 232/520 (44%), Gaps = 58/520 (11%)
Query: 112 SKLRRVTPDLVAEVLKVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAA 171
+ ++TP + ++L++ N + + + F W G Q GY+H+F Y L L N F+
Sbjct: 71 NSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTI 130
Query: 172 DQVPELMDSQGRIAEMLEILEKMR------------------RNL--CKPDVFAYTAMIR 211
D++ M +G + + + MR RN+ C+P +Y ++
Sbjct: 131 DRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLE 190
Query: 212 VLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILI 271
+L + V+ +M + + + ++ C + L R+M ++G +
Sbjct: 191 ILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVP 250
Query: 272 DRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLF 331
+ IY LI L +V +A LL+++ G D +N +I GLC+ + ++A K+
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 332 EVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEK-------------------- 371
+ APD T L+ ++GR+D L ++ K
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 372 ----------LKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNIL 418
+ + D+ + + G KE + +AL+V +++ KG +V Y IL
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 419 MGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQ 478
+ ++G++ +A + +M L+ N++ F+ I + I EA E ++
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 479 VPSVAAYNCLTKGLCKIGEIDAAMMLVRDCL--GNVASGPTEFKYALTILHVCRSGEAEK 536
P V +N L GLC++ EI A+ L+RD + G VA+ T Y I R GE ++
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT---YNTLINAFLRRGEIKE 547
Query: 537 IIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVF 576
+++NEM +G P +E+ +++I G+C+ G +++AR +F
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 202/425 (47%), Gaps = 25/425 (5%)
Query: 183 RIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYV 242
R+ E L++LE+M C PD + +I L ++ ++ M D + Y
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 243 TLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDS 302
L+ GLCK GRV +LF + + I+I + LI G V G++ A +L D+V S
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 303 -GYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDN 361
G D+ YNS+I G + A ++ P+ + L+ ++G++D
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 362 FFKLLAQM--EKLKFSVAADLEKFFEFLVG---KEERIMMALDVFEELKGKGYS-SVPIY 415
+ +L +M + LK + F L+ KE RI A+++F E+ KG V +
Sbjct: 443 AYNVLNEMSADGLKPNTVG-----FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 497
Query: 416 NILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIE 475
N L+ L E+ E+K AL+L M + N+++++ I + G+I EA + N+++
Sbjct: 498 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 557
Query: 476 MSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAE 535
YN L KGLC+ GE+D A L L + P+ + I +CRSG E
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILINGLCRSGMVE 616
Query: 536 KIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEA---NTIV 592
+ +E EM G P+ V +++I+G+C+ G +E+ +F RKL E +T+
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF-----RKLQAEGIPPDTVT 671
Query: 593 YDEIL 597
++ ++
Sbjct: 672 FNTLM 676
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 163/395 (41%), Gaps = 36/395 (9%)
Query: 180 SQGRIAEMLEILEKMRRNL-CKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADV 238
+ GR+ + +L M + PDV Y ++I E + L V +M+ + +V
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 239 MAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKD 298
+Y L+ G CK G++ + + EM +G+ + + LI E ++ +A ++ ++
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 299 LVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGR 358
+ G + D+ +NS+I GLC V + A L + + + + T N L+ G
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 359 MDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNIL 418
+ KL+ +M VF+ G + YN L
Sbjct: 545 IKEARKLVNEM------------------------------VFQ---GSPLDEIT-YNSL 570
Query: 419 MGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQ 478
+ L GEV KA LF KM +++S +I I SG + EA E +++
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 479 VPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKII 538
P + +N L GLC+ G I+ + + R L P + + +C+ G
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRK-LQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689
Query: 539 EVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEAR 573
+L+E ++G PN S ++ + TL+ R
Sbjct: 690 LLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 130/317 (41%), Gaps = 47/317 (14%)
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDN 361
+GYR +Y +IG L +F T++ LL+ + G +
Sbjct: 105 NGYRHSFDVYQVLIGKL-------------------GANGEFKTIDRLLIQMKDEGIV-- 143
Query: 362 FFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPI---YNIL 418
FK E L S+ D +K G+ R+M+ + YS P YN++
Sbjct: 144 -FK-----ESLFISIMRDYDK--AGFPGQTTRLMLEMR-------NVYSCEPTFKSYNVV 188
Query: 419 MGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQ 478
+ L+ K A +F M + +F + ++ +I A + +
Sbjct: 189 LEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGC 248
Query: 479 VPSVAAYNCLTKGLCKIGEIDAAMMLVRD--CLGNVASGPTEFKYALTILHVCRSGEAEK 536
VP+ Y L L K ++ A+ L+ + +G V T + IL +C+ +
Sbjct: 249 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET---FNDVILGLCKFDRINE 305
Query: 537 IIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEI 596
+++N M G P+++ +++G+CK G ++ A+ +F + + +++ NT+++
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI-FNTLIHG-- 362
Query: 597 LIEHMKKKTADLVLSGL 613
+ H + A VLS +
Sbjct: 363 FVTHGRLDDAKAVLSDM 379
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 123/301 (40%), Gaps = 43/301 (14%)
Query: 315 IGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKF 374
IGG +++K K F++ D L F + P +KLL +L
Sbjct: 48 IGGTDSANEWEKLLKPFDL---DSLRNSFHKITPF-----------QLYKLL----ELPL 89
Query: 375 SVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNI--LMGALLEIGEV-KKA 431
+V+ +E F G + + DV++ L GK ++ I L+ + + G V K++
Sbjct: 90 NVSTSMELFS--WTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKES 147
Query: 432 LYLF-----------GKMRGLNLEV-NSLSFSIAIQCHVESGDILEACECHN-------K 472
L++ G+ L LE+ N S + + +IL + CH
Sbjct: 148 LFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD 207
Query: 473 IIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSG 532
++ P++ + + K C + EID+A+ L+RD + P Y I + +
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRD-MTKHGCVPNSVIYQTLIHSLSKCN 266
Query: 533 EAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIV 592
+ +++L EM GC P+ + +I G+CK + EA K+ + R + T
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 593 Y 593
Y
Sbjct: 327 Y 327
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 216/461 (46%), Gaps = 27/461 (5%)
Query: 126 LKVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIA 185
L V+ N + H G K + +++N L L R + R A + E M S G +
Sbjct: 163 LLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLV- 221
Query: 186 EMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLI 245
PD +T +++ E +LD LR+ E+M + ++ ++
Sbjct: 222 ---------------PDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 246 MGLCKGGRVVRGHELFREM-KENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGY 304
G CK GRV +EM ++G D+ + L+ GL G V A +++ ++ GY
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 305 RADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFK 364
D+ YNS+I GLC++ + +A ++ + + D +P+ T N L+ + +++ +
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 365 LLAQMEKLKFSVAADLEKFFEFLVG----KEERIMMALDVFEELKGKGYSSVPI-YNILM 419
LA++ K + D+ F + G + R+ A+++FEE++ KG YN+L+
Sbjct: 387 -LARVLTSK-GILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSKGCEPDEFTYNMLI 442
Query: 420 GALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQV 479
+L G++ +AL + +M + ++++ I ++ EA E +++
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 480 PSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIE 539
+ YN L GLCK ++ A L+ D + P ++ Y + H CR G+ +K +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLM-DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 540 VLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLR 580
++ MT GC P+ V +ISG+CK G +E A K+ +++
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 182/418 (43%), Gaps = 11/418 (2%)
Query: 181 QGRIAEMLEILEKM-RRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVM 239
+GR+ + L +++M ++ PD + + ++ L ++ + + + M ++ + DV
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331
Query: 240 AYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDL 299
Y ++I GLCK G V E+ +M + Y LI L E +V +A +L + L
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 300 VDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRM 359
G D+ +NS+I GLC + A +LFE PD T N L+ G++
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 360 DNFFKLLAQMEKLKFSVAADLEKFFEFLVG---KEERIMMALDVFEELKGKGYSSVPI-Y 415
D +L QME S A + L+ K + A ++F+E++ G S + Y
Sbjct: 452 DEALNMLKQME---LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 416 NILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIE 475
N L+ L + V+ A L +M + + +++ + GDI +A + +
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 476 MSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAE 535
P + Y L GLCK G ++ A L+R + T Y I + R +
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRS-IQMKGINLTPHAYNPVIQGLFRKRKTT 627
Query: 536 KIIEVLNEMTQEG-CPPNEVICSAIISGMCK-HGTLEEARKVFTNLRERKLLTEANTI 591
+ I + EM ++ PP+ V + G+C G + EA L E+ + E +++
Sbjct: 628 EAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSL 685
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 40/332 (12%)
Query: 303 GYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNF 362
G + D+ +N +I LCR Q A + E L PD T ++ E G +D
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 363 FKLLAQMEKL-----KFSVAADLEKF----------------------------FEFLVG 389
++ QM + SV + F F LV
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 390 ---KEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEV 445
K + A+++ + + +GY V YN ++ L ++GEVK+A+ + +M +
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 446 NSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLV 505
N+++++ I + + EA E + +P V +N L +GLC AM L
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 506 RDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCK 565
+ + + P EF Y + I +C G+ ++ + +L +M GC + + + +I G CK
Sbjct: 424 EE-MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 566 HGTLEEARKVFTNLRERKLLTEANTIVYDEIL 597
EA ++F + + N++ Y+ ++
Sbjct: 483 ANKTREAEEIFDEMEVHGV--SRNSVTYNTLI 512
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 203/451 (45%), Gaps = 28/451 (6%)
Query: 135 ASKFFHWAGKQKGYKHNFASYNAL--AYCLSRNNLFRAADQVPELMDSQGRIAEMLEILE 192
A H A + G+ SYNA+ A S+ N+ A + E+++SQ
Sbjct: 153 ALSIVHLA-QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ----------- 200
Query: 193 KMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGG 252
P+VF Y +IR N+D L ++++M+ +V+ Y TLI G CK
Sbjct: 201 ------VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 253 RVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYN 312
++ G +L R M G+ + Y V+I GL EG++ + +L ++ GY D YN
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 313 SIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKL 372
++I G C+ F +A + ++ L P T L+ + G M+ + L QM
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM--- 371
Query: 373 KFSVAADLEKFFEFLV-GKEERIMM--ALDVFEELKGKGYS-SVPIYNILMGALLEIGEV 428
+ E+ + LV G ++ M A V E+ G+S SV YN L+ G++
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 429 KKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCL 488
+ A+ + M+ L + +S+S + S D+ EA +++E P Y+ L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 489 TKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEG 548
+G C+ A L + L V P EF Y I C G+ EK +++ NEM ++G
Sbjct: 492 IQGFCEQRRTKEACDLYEEML-RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 549 CPPNEVICSAIISGMCKHGTLEEARKVFTNL 579
P+ V S +I+G+ K EA+++ L
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 208/490 (42%), Gaps = 47/490 (9%)
Query: 146 KGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFA 205
KG + N SYN + L R +GR+ E+ +L +M R D
Sbjct: 269 KGLEPNLISYNVVINGLCR----------------EGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 206 YTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMK 265
Y +I+ E N L + EM + + V+ Y +LI +CK G + R E +M+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 266 ENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFD 325
G+ + Y L++G +G + +A +L+++ D+G+ + YN++I G C + +
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 326 KAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFE 385
A + E + L+PD + + +L +D ++ + E ++ + D +
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV--KREMVEKGIKPDTITYSS 490
Query: 386 FLVG--KEERIMMALDVFEELKGKGYSSVP----IYNILMGALLEIGEVKKALYLFGKMR 439
+ G ++ R A D++EE+ G +P Y L+ A G+++KAL L +M
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVG---LPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 440 GLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAY-----NC------- 487
+ + +++S+ I + EA K+ VPS Y NC
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 488 ---LTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEM 544
L KG C G + A + LG P Y + I CR+G+ K + EM
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGK-NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 545 TQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIE-HMKK 603
+ G + V A++ + K G + E V ++ L+EA ++L+E + ++
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQA---KVLVEINHRE 723
Query: 604 KTADLVLSGL 613
D+VL L
Sbjct: 724 GNMDVVLDVL 733
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 166/378 (43%), Gaps = 28/378 (7%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
+G + E +L +M N P V Y A+I ++ + V E+MK+ + DV++
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y T++ G C+ V + REM E GI D Y LI+G + + +ACDL ++++
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD 360
G D Y ++I C +KA +L V+ + PD T + L+ + R
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 361 NFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNILMG 420
+LL L+ F+E V + ++ ++ K S+ + G
Sbjct: 573 EAKRLL-------------LKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 421 ALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVP 480
+ E +V F M G N + + +++I I H +GDI +A + ++++ +
Sbjct: 620 MMTEADQV------FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673
Query: 481 SVAAYNCLTKGLCKIGEID----AAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEK 536
L K L K G+++ + ++R C S + K + I H R G +
Sbjct: 674 HTVTVIALVKALHKEGKVNELNSVIVHVLRSC---ELSEAEQAKVLVEINH--REGNMDV 728
Query: 537 IIEVLNEMTQEGCPPNEV 554
+++VL EM ++G PN +
Sbjct: 729 VLDVLAEMAKDGFLPNGI 746
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 216/466 (46%), Gaps = 25/466 (5%)
Query: 147 GYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQG-------------------RIAEM 187
G H+ +Y+ C R + A V M G RI++
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 188 LEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMG 247
+ ++++M KPD F +T +I L + + ++M + + D++ Y T++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 248 LCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRAD 307
LCK G + L ++M++ I D IY +I+GL + A +L ++ + G R D
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 308 LGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLA 367
+ Y+S+I LC ++ A +L ++ + P+ T + L+ + G++ KL
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 368 QMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKG-YSSVPIYNILMGALLE 424
+M +K S+ D+ + + G +R+ A +FE + K + +V Y+ L+ +
Sbjct: 353 EM--IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 425 IGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAA 484
V++ + LF +M L N+++++ I ++ D A +++ + P++
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 485 YNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEM 544
YN L GLCK G++ A M+V + L P + Y + I +C++G+ E E+ +
Sbjct: 471 YNILLDGLCKNGKL-AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 545 TQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
+ +G PN + + +ISG C+ G+ EEA + ++E L + T
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/526 (22%), Positives = 230/526 (43%), Gaps = 35/526 (6%)
Query: 77 KTFQLQRHLSPIARFITDAFRKNQFQWGPQVVTELSKLRRVTPDLVAEVLKVENNPTLAS 136
+T + L + FI R++Q V+ ++ KL PD+V L N S
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG-YEPDIVT--LSSLLNGYCHS 166
Query: 137 KFFHWAGK------QKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEI 190
K A + GYK + ++ L + L +N + +E + +
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN----------------KASEAVAL 210
Query: 191 LEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCK 250
+++M + C+PD+ Y ++ L ++D L + ++M+K +EADV+ Y T+I GLCK
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 251 GGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGI 310
+ LF EM GI D Y LI L G+ A LL D+++ ++
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 311 YNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD---NFFKLLA 367
++++I + + +A KL++ ++ + PD T + L+ R+D + F+L+
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 368 QMEKLKFSVA-ADLEKFFEFLVGKEERIMMALDVFEELKGKGY-SSVPIYNILMGALLEI 425
+ V + L K F K +R+ +++F E+ +G + Y L+ +
Sbjct: 391 SKDCFPNVVTYSTLIKGF----CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 426 GEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAY 485
+ A +F +M + + N L+++I + ++G + +A + + P + Y
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 486 NCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMT 545
N + +G+CK G+++ L + L P Y I CR G E+ +L +M
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCN-LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Query: 546 QEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTI 591
++G PN + +I + G E + ++ +R +A+TI
Sbjct: 566 EDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 201/457 (43%), Gaps = 28/457 (6%)
Query: 131 NPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEI 190
NP FF+ G ++ +FAS + + RN R +D + ++ + +++
Sbjct: 23 NPPTVPSFFNLCG-SGCWERSFASASGDYREILRN---RLSDII--------KVDDAVDL 70
Query: 191 LEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCK 250
M ++ P + + ++ +A + + + E+M+ + D+ Y I C+
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 251 GGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGI 310
++ + +M + G D L+ G ++ A L+ +V+ GY+ D
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 311 YNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQME 370
+ ++I GL + +A L + VQ PD T ++ + G +D LL +ME
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 371 KLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGE 427
K K + AD+ + + G K + + AL++F E+ KG V Y+ L+ L G
Sbjct: 251 KGK--IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 428 VKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNC 487
A L M + N ++FS I V+ G ++EA + ++++I+ S P + Y+
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 488 LTKGLCKIGEIDAA-----MMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLN 542
L G C +D A +M+ +DC NV + Y+ I C++ E+ +E+
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVT------YSTLIKGFCKAKRVEEGMELFR 422
Query: 543 EMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNL 579
EM+Q G N V + +I G + + A+ VF +
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Query: 201 PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHEL 260
P++ Y ++ L L + V+E +++ +E D+ Y +I G+CK G+V G EL
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 261 FREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCR 320
F + G+ + Y +I G +G +A LLK + + G + G YN++I R
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Query: 321 VKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFF 363
+ + +L + A D ST+ L+ GR+D F
Sbjct: 586 DGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 627
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 176 ELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVE 235
E M G++ + E+ + P+V AY MI + + + + ++MK+D
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 236 ADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKA 292
+ Y TLI + G EL +EM+ G D + G L+ ++ +G++ K+
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 626
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 205/443 (46%), Gaps = 51/443 (11%)
Query: 148 YKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYT 207
Y+ N ++N L + L +N + +E + ++++M C+PD+F Y
Sbjct: 181 YQPNTVTFNTLIHGLFLHN----------------KASEAVALIDRMVARGCQPDLFTYG 224
Query: 208 AMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKEN 267
++ L ++D L + ++M+K +EADV+ Y T+I LC V LF EM
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 268 GILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKA 327
GI + Y LI L G+ A LL D+++ ++ ++++I + + +A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 328 YKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFL 387
KL++ ++ + PD T + L+ N F + ++++ K FE +
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLI----------NGFCMHDRLDEAK--------HMFELM 386
Query: 388 VGKEERIMMALDVFEELKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNS 447
+ K+ + +V YN L+ + V++ + LF +M L N+
Sbjct: 387 ISKD----------------CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 448 LSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRD 507
++++ IQ ++GD A + K++ P + Y+ L GLCK G+++ A ++V +
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA-LVVFE 489
Query: 508 CLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHG 567
L P + Y + I +C++G+ E ++ ++ +G PN +I + +ISG C+ G
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 568 TLEEARKVFTNLRERKLLTEANT 590
EEA +F ++E L + T
Sbjct: 550 LKEEADALFREMKEDGTLPNSGT 572
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 177/413 (42%), Gaps = 39/413 (9%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
+G I L +L+KM + + DV YT +I L +N++ L ++ EM + +V+
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y +LI LC GR L +M E I + + LI+ V EGK+ +A L +++
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD 360
D+ Y+S+I G C + D+A +FE+ + D P+ T N L+
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI---------- 402
Query: 361 NFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGY-SSVPIYNILM 419
K F K +R+ +++F E+ +G + YN L+
Sbjct: 403 ---------------------KGF----CKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 420 GALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQV 479
L + G+ A +F KM + + +++SI + + G + +A + +
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 480 PSVAAYNCLTKGLCKIGEIDAAMMLVRDC-LGNVASGPTEFKYALTILHVCRSGEAEKII 538
P + YN + +G+CK G+++ L C L P Y I CR G E+
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLF--CSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 539 EVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTI 591
+ EM ++G PN + +I + G + ++ +R + +A+TI
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 608
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 187/449 (41%), Gaps = 77/449 (17%)
Query: 192 EKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKG 251
E+M+ D+++Y +I L L V +M K E D++ +L+ G C G
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 252 GRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIY 311
R+ L +M + + LI GL K +A L+ +V G + DL Y
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 312 NSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEK 371
+++ GLC+ G +D LL +MEK
Sbjct: 224 GTVVNGLCK-----------------------------------RGDIDLALSLLKKMEK 248
Query: 372 LKFSVAADLEKFFEFL--VGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEV 428
K + AD+ + + + + + AL++F E+ KG +V YN L+ L G
Sbjct: 249 GK--IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 429 KKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCL 488
A L M + N ++FS I V+ G ++EA + ++++I+ S P + Y+ L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 489 TKGLCKIGEIDAA-----MMLVRDCLGNVASGPTEFK----------------------- 520
G C +D A +M+ +DC NV + T K
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 521 ------YALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARK 574
Y I + ++G+ + ++ +M +G PP+ + S ++ G+CK+G LE+A
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 575 VFTNLRERKLLTEANTIVYDEILIEHMKK 603
VF L++ K+ E + Y+ I+IE M K
Sbjct: 487 VFEYLQKSKM--EPDIYTYN-IMIEGMCK 512
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 156/339 (46%), Gaps = 36/339 (10%)
Query: 145 QKGYKHNFASYNALAYCLSRNNLFRAADQV----------------PELMDS---QGRIA 185
KG + N +YN+L CL + A ++ L+D+ +G++
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 186 EMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLI 245
E ++ ++M + PD+F Y+++I LD ++E M +V+ Y TLI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 246 MGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYR 305
G CK RV G ELFREM + G++ + Y LI+GL G A + K +V G
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 306 ADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKL 365
D+ Y+ ++ GLC+ + +KA +FE + + PD T N ++ + G++++ + L
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 366 LAQMEKLKFSVAADLEKFFEFLVG------KEERIMMALDVFEELKGKGYSSVP---IYN 416
+ LK V ++ + + G KEE A +F E+K G ++P YN
Sbjct: 523 FCSLS-LK-GVKPNVIIYTTMISGFCRKGLKEE----ADALFREMKEDG--TLPNSGTYN 574
Query: 417 ILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQ 455
L+ A L G+ + L +MR ++ + S+ I
Sbjct: 575 TLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 53/143 (37%), Gaps = 35/143 (24%)
Query: 176 ELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVE 235
E M G++ + ++ + KP+V YT
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT---------------------------- 539
Query: 236 ADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDL 295
T+I G C+ G LFREMKE+G L + Y LI + +G + +L
Sbjct: 540 -------TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 296 LKDLVDSGYRADLGIYNSIIGGL 318
+K++ G+ D + +I L
Sbjct: 593 IKEMRSCGFVGDASTISMVINML 615
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 224/495 (45%), Gaps = 30/495 (6%)
Query: 114 LRRVTPDLVAEVLK---VENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNN---- 166
L +++P+ V+ VLK + P +A FF W+ KQK Y HN Y +L L+
Sbjct: 111 LIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDR 170
Query: 167 ---------------LFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIR 211
AA+ + + G + E+L + KM+ N +P ++ Y ++
Sbjct: 171 IRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMN 230
Query: 212 VLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILI 271
L + +D+ RV+E M+ ++ D++ Y T+I G CK G+ + E R+M+ G
Sbjct: 231 GLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEA 290
Query: 272 DRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLF 331
D+ Y +I+ + G L +++ + G + ++ +IGGLC+ + ++ Y +F
Sbjct: 291 DKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVF 350
Query: 332 EVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG-- 389
E ++ P+ + L+ A+ G +++ +LL +M F D+ + + G
Sbjct: 351 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK--PDVVTYSVVVNGLC 408
Query: 390 KEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSL 448
K R+ ALD F + G + + Y+ L+ L + G V +A LF +M +S
Sbjct: 409 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 449 SFSIAIQCHVESGDILEACECHNKIIEMSQVP-SVAAYNCLTKGLCKIGEIDAAMMLVRD 507
++ I + + EA ++ E +V Y L G+ K + A+ L D
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLW-D 527
Query: 508 CLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHG 567
+ + PT + +C SG+ + ++L+E+ G + C +I+ +CK G
Sbjct: 528 MMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAA-CEDMINTLCKAG 586
Query: 568 TLEEARKVFTNLRER 582
++EA K+ + ER
Sbjct: 587 RIKEACKLADGITER 601
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 221/496 (44%), Gaps = 14/496 (2%)
Query: 112 SKLRRVTPDLVAEVLKVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAA 171
S + ++P V+ + ++ +P A F HW + YKH+ SY +L L N
Sbjct: 83 SMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVV 142
Query: 172 DQVPELM----DSQGRIAEMLEILEKMRRN-----LCKPDVFAYTAMIRVLAAERNLDAC 222
++ LM DS G +L++ KM ++ K + Y ++ LA +D
Sbjct: 143 FKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEM 202
Query: 223 LRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEG 282
+V+ EM +D V ++ Y ++ G CK G V ++ ++ E G+ D Y LI G
Sbjct: 203 KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG 262
Query: 283 LVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPD 342
+ A + ++ G R + Y +I GLC ++ D+A LF D+ P
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 343 FSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFE 402
T L+ R L+ +ME+ + + + A ++
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 403 ELKGKG-YSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESG 461
++ KG +V YN L+ + G ++ A+ + M L N+ +++ I+ + +S
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS- 441
Query: 462 DILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKY 521
++ +A NK++E +P V YN L G C+ G D+A L+ + + P ++ Y
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL-SLMNDRGLVPDQWTY 500
Query: 522 ALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRE 581
I +C+S E+ ++ + + Q+G PN V+ +A+I G CK G ++EA + +
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 582 RKLLTEANTIVYDEIL 597
+ L N++ ++ ++
Sbjct: 561 KNCL--PNSLTFNALI 574
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 201/469 (42%), Gaps = 34/469 (7%)
Query: 148 YKHNFASYNALAYCLSRNNLFRAADQV-PELMDSQ------------------GRIAEML 188
YK YN L L+R L QV E+++ + G + E
Sbjct: 179 YKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEAN 238
Query: 189 EILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGL 248
+ + K+ PD F YT++I ++LD+ +V+ EM + +AY LI GL
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 249 CKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADL 308
C R+ +LF +MK++ Y VLI+ L G + +A +L+K++ ++G + ++
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 309 GIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQ 368
Y +I LC +F+KA +L ++ L P+ T N L+ + G +++ ++
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 369 MEKLKFSVAADLEKFFEFLVGK-EERIMMALDVFEE-LKGKGYSSVPIYNILMGALLEIG 426
ME K S + + E + G + + A+ V + L+ K V YN L+ G
Sbjct: 419 MESRKLS--PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 427 EVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYN 486
A L M L + +++ I +S + EAC+ + + + P+V Y
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 487 CLTKGLCKIGEIDAAM-----MLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVL 541
L G CK G++D A ML ++CL P + I +C G+ ++ +
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCL------PNSLTFNALIHGLCADGKLKEATLLE 590
Query: 542 NEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
+M + G P + +I + K G + A F + +A+T
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 188/431 (43%), Gaps = 36/431 (8%)
Query: 151 NFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMI 210
+ +YN+L R+ F +A ++ LM+ +G + PD + YT+MI
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV----------------PDQWTYTSMI 504
Query: 211 RVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGIL 270
L + ++ +++ +++ V +V+ Y LI G CK G+V H + +M L
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 271 IDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKL 330
+ + LI GL +GK+ +A L + +V G + + +I L + FD AY
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 331 FEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGK 390
F+ + PD T + GR+ + ++A+M + V+ DL + + G
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR--ENGVSPDLFTYSSLIKGY 682
Query: 391 EE--RIMMALDVFEELKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSL 448
+ + A DV + ++ G P + + + + E+K +GK +G E+ ++
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCE--PSQHTFLSLIKHLLEMK-----YGKQKGSEPELCAM 735
Query: 449 SFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDC 508
S + VE +LE K++E S P+ +Y L G+C++G + A +
Sbjct: 736 SNMMEFDTVVE---LLE------KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 509 LGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGT 568
N P+E + + C+ + + +V+++M G P C +I G+ K G
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846
Query: 569 LEEARKVFTNL 579
E VF NL
Sbjct: 847 KERGTSVFQNL 857
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/473 (21%), Positives = 197/473 (41%), Gaps = 75/473 (15%)
Query: 145 QKGYKHNFASYNAL--AYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPD 202
+KG N +YNAL YC +G I + ++++E M P+
Sbjct: 386 EKGLMPNVITYNALINGYC------------------KRGMIEDAVDVVELMESRKLSPN 427
Query: 203 VFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFR 262
Y +I+ + N+ + V +M + V DV+ Y +LI G C+ G + L
Sbjct: 428 TRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 263 EMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVK 322
M + G++ D+ Y +I+ L +V +ACDL L G ++ +Y ++I G C+
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 323 QFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEK 382
+ D+A+ + E + + P+ T N L+ G++ L +M K+
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ------- 599
Query: 383 FFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLN 442
+V IL+ LL+ G+ A F +M
Sbjct: 600 ---------------------------PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 443 LEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAM 502
+ ++ +++ IQ + G +L+A + K+ E P + Y+ L KG +G+ + A
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 503 MLVRDCLGNVASGPTEFKYALTILHV---------------CRSG---EAEKIIEVLNEM 544
+++ + + P++ + I H+ C E + ++E+L +M
Sbjct: 693 DVLKR-MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751
Query: 545 TQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEIL 597
+ PN +I G+C+ G L A KVF +++ + ++ + +V++ +L
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE-LVFNALL 803
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Query: 175 PEL--MDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKD 232
PEL M + ++E+LEKM + P+ +Y +I + NL +V++ M+++
Sbjct: 730 PELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRN 789
Query: 233 L-VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGK 291
+ + + L+ CK + ++ +M G L VLI GL +G+ +
Sbjct: 790 EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKER 849
Query: 292 ACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEV 333
+ ++L+ GY D + II G+ + + Y+LF V
Sbjct: 850 GTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNV 891
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 131 NPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEI 190
N +A K F + +G + +NAL C + A +V + M G + +
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ---- 830
Query: 191 LEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCK 250
LE + +C ++ R + +NL C +E+ A+ +I G+ K
Sbjct: 831 LESCKVLIC--GLYKKGEKERGTSVFQNLLQCGYYEDEL----------AWKIIIDGVGK 878
Query: 251 GGRVVRGHELFREMKENGILIDRAIYGVLIEG 282
G V +ELF M++NG Y +LIEG
Sbjct: 879 QGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 196/420 (46%), Gaps = 19/420 (4%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
+ +++ L IL KM + P + +++ + + + ++M + + D +
Sbjct: 123 RSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT 182
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
+ TL+ GL + + L M G D YG +I GL G+ A +LL +
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD 360
AD+ IYN+II GLC+ K D A+ LF + PD T NPL+ C GR
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS 302
Query: 361 NFFKLLAQMEKLKFSVAADLEKFFEFLVG---KEERIMMALDVFEEL-KGKG-YSSVPIY 415
+ +LL+ M L+ ++ DL FF L+ KE +++ A +++E+ K K + V Y
Sbjct: 303 DASRLLSDM--LEKNINPDL-VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Query: 416 NILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIE 475
N L+ + V++ + +F +M L N+++++ I ++ D A +++
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Query: 476 MSQVPSVAAYNCLTKGLCKIGEIDAAMMLV-----RDCLGNVASGPTEFKYALTILHVCR 530
P + YN L GLC G ++ A+++ RD ++ + Y I +C+
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT------YTTMIEALCK 473
Query: 531 SGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
+G+ E ++ ++ +G PN V + ++SG C+ G EEA +F ++E L + T
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 188/425 (44%), Gaps = 14/425 (3%)
Query: 164 RNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACL 223
R NL R Q +L D+ G +M+ ++ P + ++ ++ +A D +
Sbjct: 43 RENLSRKVLQDLKLDDAIGLFGDMV-------KSRPFPSIVEFSKLLSAIAKMNKFDLVI 95
Query: 224 RVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGL 283
+ E+M+ + ++ Y I C+ ++ + +M + G L+ G
Sbjct: 96 SLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGF 155
Query: 284 VGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDF 343
++ +A L+ +V+ GY+ D + +++ GL + + +A L E V PD
Sbjct: 156 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215
Query: 344 STVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVF 401
T ++ + G D LL +MEK K + AD+ + + G K + + A D+F
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGK--IEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 402 EELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVES 460
+++ KG V YN L+ L G A L M N+ + + F+ I V+
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 461 GDILEACECHNKIIEMSQ-VPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEF 519
G ++EA + ++++++ P V AYN L KG CK ++ M + R+ G T
Sbjct: 334 GKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT-V 392
Query: 520 KYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNL 579
Y I ++ + + V +M +G P+ + + ++ G+C +G +E A VF +
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 580 RERKL 584
++R +
Sbjct: 453 QKRDM 457
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%)
Query: 183 RIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYV 242
R+ E +E+ +M + + YT +I R+ D V+++M D V D+M Y
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 243 TLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDS 302
L+ GLC G V +F M++ + +D Y +IE L GKV DL L
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 303 GYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLL 350
G + ++ Y +++ G CR ++A LF +D P+ T N L+
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 125/299 (41%), Gaps = 42/299 (14%)
Query: 64 LPNQKTQSPPSDPKTFQLQRHLSPIARF---ITDAF-RKNQFQWGPQVVTELSKLRRVTP 119
L N S S + L+++++P F + DAF ++ + ++ E+ K + P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 120 DLVAEVLKVENNPTLASKFFHWAG-----------KQKGYKHNFASYNALAY-------C 161
D+VA TL F + Q+G N +Y L + C
Sbjct: 355 DVVAY-------NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 162 LSRNNLFR--AADQV-PELMD---------SQGRIAEMLEILEKMRRNLCKPDVFAYTAM 209
+ +F+ +D V P++M + G + L + E M++ K D+ YT M
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 210 IRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGI 269
I L ++ ++ + V+ +V+ Y T++ G C+ G LF EMKE+G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 270 LIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAY 328
L + Y LI + +G + +L+K++ G+ D + ++ + + DK++
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKSF 585
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 202/458 (44%), Gaps = 53/458 (11%)
Query: 145 QKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVF 204
+ GY+ + ++ L + L ++N + +E + ++E+M C+PD+
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHN----------------KASEAVALVERMVVKGCQPDLV 206
Query: 205 AYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREM 264
Y A+I L D L + +M+K +EADV+ Y T+I LCK V LF EM
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 265 KENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQF 324
GI D Y LI L G+ A LL D+++ ++ +NS+I + +
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 325 DKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFF 384
+A KLF+ +Q + P+ T N L+ R+D + ++ F
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD------------------EAQQIF 368
Query: 385 EFLVGKEERIMMALDVFEELKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLE 444
+V K+ V YN L+ + +V + LF M L
Sbjct: 369 TLMVSKD----------------CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 445 VNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMML 504
N+++++ I ++ D A +++ P++ YN L GLCK G+++ A M+
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA-MV 471
Query: 505 VRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMC 564
V + L P + Y + +C++G+ E ++ ++ +G P+ + + +ISG C
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531
Query: 565 KHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEHMK 602
K G EEA +F ++E L ++ T Y+ ++ H++
Sbjct: 532 KKGLKEEAYTLFIKMKEDGPLPDSGT--YNTLIRAHLR 567
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 142/321 (44%), Gaps = 32/321 (9%)
Query: 145 QKGYKHNFASYNALAYCLSRNNLFRAADQV----------------PELMDS---QGRIA 185
KG + + +Y++L CL + A ++ L+D+ +G++
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 186 EMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLI 245
E ++ ++M + P++ Y ++I LD +++ M DV+ Y TLI
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 246 MGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYR 305
G CK +VV G ELFR+M G++ + Y LI G A + K +V G
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 306 ADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKL 365
++ YN+++ GLC+ + +KA +FE + + PD T N + + G++++ + L
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 366 LAQMEKLKFSVAADLEKFFEFLVG------KEERIMMALDVFEELKGKG-YSSVPIYNIL 418
+ LK V D+ + + G KEE A +F ++K G YN L
Sbjct: 508 FCSLS-LK-GVKPDVIAYNTMISGFCKKGLKEE----AYTLFIKMKEDGPLPDSGTYNTL 561
Query: 419 MGALLEIGEVKKALYLFGKMR 439
+ A L G+ + L +MR
Sbjct: 562 IRAHLRDGDKAASAELIKEMR 582
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 17/182 (9%)
Query: 147 GYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAY 206
G N +YN L L +N G++ + + + E ++++ +PD++ Y
Sbjct: 445 GVHPNIMTYNTLLDGLCKN----------------GKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 207 TAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKE 266
M + ++ ++ + V+ DV+AY T+I G CK G + LF +MKE
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Query: 267 NGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDK 326
+G L D Y LI + +G + +L+K++ + D Y ++ + + DK
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDK 607
Query: 327 AY 328
+
Sbjct: 608 GF 609
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 213/485 (43%), Gaps = 56/485 (11%)
Query: 147 GYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAY 206
G HN +Y+ L C R + Q+P L +L KM + +P++
Sbjct: 111 GIPHNHYTYSILINCFCRRS------QLPL----------ALAVLGKMMKLGYEPNIVTL 154
Query: 207 TAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKE 266
++++ + + + + ++M + + + + TLI GL + L M
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 214
Query: 267 NGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDK 326
G D YGV++ GL G A +LL + + IYN+II GLC+ K D
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 327 AYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQM-------EKLKFSVAAD 379
A LF+ + P+ T + L+ C GR + +LL+ M + FS D
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 380 ----------LEKFFEFLVGK------------------EERIMMALDVFEELKGKG-YS 410
EK ++ +V + +R+ A +FE + K +
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 411 SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECH 470
V YN L+ + V++ + +F +M L N+++++I IQ ++GD A E
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 471 NKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCR 530
+++ P++ YN L GLCK G+++ A M+V + L PT + Y + I +C+
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA-MVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 531 SGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEA-- 588
+G+ E ++ ++ +G P+ V + +ISG C+ G+ EEA +F ++E L +
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 589 -NTIV 592
NT++
Sbjct: 574 YNTLI 578
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 198/448 (44%), Gaps = 22/448 (4%)
Query: 147 GYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAY 206
GY+ N ++N L + L +N + +E + ++++M C+PD+ Y
Sbjct: 181 GYQPNTVTFNTLIHGLFLHN----------------KASEAMALIDRMVAKGCQPDLVTY 224
Query: 207 TAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKE 266
++ L + D + +M++ +E V+ Y T+I GLCK + LF+EM+
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 267 NGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDK 326
GI + Y LI L G+ A LL D+++ D+ ++++I + + +
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 327 AYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEF 386
A KL++ V+ + P T + L+ R+D ++ M + D+ +
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM--VSKHCFPDVVTYNTL 402
Query: 387 LVG--KEERIMMALDVFEELKGKGY-SSVPIYNILMGALLEIGEVKKALYLFGKMRGLNL 443
+ G K +R+ ++VF E+ +G + YNIL+ L + G+ A +F +M +
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 444 EVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMM 503
N ++++ + ++G + +A + P++ YN + +G+CK G+++
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 504 LVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGM 563
L + L P Y I CR G E+ + EM ++G PN + +I
Sbjct: 523 LFCN-LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Query: 564 CKHGTLEEARKVFTNLRERKLLTEANTI 591
+ G E + ++ +R +A+TI
Sbjct: 582 LRDGDREASAELIKEMRSCGFAGDASTI 609
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 205/477 (42%), Gaps = 50/477 (10%)
Query: 162 LSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDA 221
LSRN L S+ ++ + + + +M ++ P + ++ ++ +A D
Sbjct: 52 LSRNGL------------SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV 99
Query: 222 CLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIE 281
+ + E+M+ + + Y LI C+ ++ + +M + G + L+
Sbjct: 100 VISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN 159
Query: 282 GLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAP 341
G ++ +A L+ + +GY+ + +N++I GL + +A L + V P
Sbjct: 160 GYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQP 219
Query: 342 DFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVF 401
D T ++ + G D F LL +ME+ K + + K + + AL++F
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 402 EELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVES 460
+E++ KG +V Y+ L+ L G A L M + + +FS I V+
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 461 GDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAA-----MMLVRDCLGNVASG 515
G ++EA + ++++++ S PS+ Y+ L G C +D A M+ + C +V +
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 516 PTEFK-----------------------------YALTILHVCRSGEAEKIIEVLNEMTQ 546
T K Y + I + ++G+ + E+ EM
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 547 EGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEHMKK 603
+G PPN + + ++ G+CK+G LE+A VF L+ K+ E Y+ I+IE M K
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM--EPTIYTYN-IMIEGMCK 513
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 155/324 (47%), Gaps = 36/324 (11%)
Query: 144 KQKGYKHNFASYNALAYCLSRNNLFRAADQV----------------PELMDS---QGRI 184
+ KG + N +Y++L CL + A ++ L+D+ +G++
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 185 AEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTL 244
E ++ ++M + P + Y+++I LD +++E M DV+ Y TL
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 245 IMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGY 304
I G CK RV G E+FREM + G++ + Y +LI+GL G A ++ K++V G
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 305 RADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFK 364
++ YN+++ GLC+ + +KA +FE + + P T N ++ + G++++ +
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 365 LLAQMEKLKFSVAADLEKFFEFLVG------KEERIMMALDVFEELKGKGYSSVP---IY 415
L + LK V D+ + + G KEE A +F+E+K G ++P Y
Sbjct: 523 LFCNLS-LK-GVKPDVVAYNTMISGFCRKGSKEE----ADALFKEMKEDG--TLPNSGCY 574
Query: 416 NILMGALLEIGEVKKALYLFGKMR 439
N L+ A L G+ + + L +MR
Sbjct: 575 NTLIRARLRDGDREASAELIKEMR 598
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 216/474 (45%), Gaps = 26/474 (5%)
Query: 144 KQKGYKHNFASYNALAYCLSRNNL---------------FRAADQV-PELMDSQGR---I 184
++ G+ N SYN L + L ++ FR + Q LM G+ I
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 185 AEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTL 244
++ +L++M KP+V+ +T IRVL ++ + + M + DV+ Y L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 245 IMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGY 304
I LC ++ E+F +MK DR Y L++ + ++ G+
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 305 RADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFK 364
D+ + ++ LC+ F +A+ +V + P+ T N L+ + R+D+ +
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 365 LLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALL 423
L ME L A F GK + AL+ FE++K KG + ++ N + +L
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 424 EIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVA 483
+ G ++A +F ++ + L +S+++++ ++C+ + G+I EA + ++++E P V
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 539
Query: 484 AYNCLTKGLCKIGEIDAAM-MLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLN 542
N L L K +D A M +R + + PT Y + + ++G+ ++ IE+
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMR--MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 543 EMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEA---NTIVY 593
M Q+GCPPN + + + +CK+ + A K+ + + + + NTI++
Sbjct: 598 GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 192/415 (46%), Gaps = 18/415 (4%)
Query: 191 LEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCK 250
L KMR + ++Y +I +L R + V+ M + + Y +L++GL K
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 251 GGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGI 310
+ L +EM+ G+ + + + I L GK+ +A ++LK + D G D+
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 311 YNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQME 370
Y +I LC ++ D A ++FE PD T LL ++ +D+ + ++ME
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 371 K-------LKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKG-YSSVPIYNILMGAL 422
K + F++ D + K A D + ++ +G ++ YN L+ L
Sbjct: 356 KDGHVPDVVTFTILVD-------ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 423 LEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSV 482
L + + AL LFG M L ++ + ++ + I + +SGD + A E K+ P++
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Query: 483 AAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLN 542
A N L K G A + L ++ P Y + + + GE ++ I++L+
Sbjct: 469 VACNASLYSLAKAGRDREAKQIFYG-LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS 527
Query: 543 EMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEIL 597
EM + GC P+ ++ +++I+ + K ++EA K+F ++E KL + + Y+ +L
Sbjct: 528 EMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL--KPTVVTYNTLL 580
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 208/496 (41%), Gaps = 63/496 (12%)
Query: 144 KQKGYKHNFASYNALAYCLSRNNLFRAADQ----------VPELMDSQ---------GRI 184
K KG N + NA Y L++ R A Q VP+ + G I
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
Query: 185 AEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTL 244
E +++L +M N C+PDV ++I L +D +++ MK+ ++ V+ Y TL
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Query: 245 IMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGY 304
+ GL K G++ ELF M + G + + L + L +V A +L ++D G
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 305 RADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFK 364
D+ YN+II GL + Q +A F ++ + PDF T+ LL + +++ +K
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAMCFFH-QMKKLVYPDFVTLCTLLPGVVKASLIEDAYK 698
Query: 365 LLAQMEKLKFSVAADLEKFFEFLVGK---EERIMMALDVFEELKGKG------------- 408
++ A+L F+E L+G E I A+ E L G
Sbjct: 699 IITNFLYNCADQPANL--FWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPII 756
Query: 409 -YS------------------------SVPIYNILMGALLEIGEVKKALYLFGKMRGLNL 443
YS +P YN+L+G LLE ++ A +F +++
Sbjct: 757 RYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC 816
Query: 444 EVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMM 503
+ +++ + + +SG I E E + ++ + +N + GL K G +D A+
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 504 LVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGM 563
L D + + PT Y I + +SG + ++ M GC PN I + +I+G
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 564 CKHGTLEEARKVFTNL 579
K G + A +F +
Sbjct: 937 GKAGEADAACALFKRM 952
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 183/393 (46%), Gaps = 22/393 (5%)
Query: 209 MIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENG 268
M+ L + L+ V++ M+K +++ D Y+T+ L G + + R+M+E G
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 269 ILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAY 328
+++ Y LI L+ +A ++ + ++ G+R L Y+S++ GL + + D
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVM 243
Query: 329 KLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEK-------LKFSVAADLE 381
L + L P+ T + G+++ +++L +M+ + ++V D
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID-- 301
Query: 382 KFFEFLVGKEERIMMALDVFEELK-GKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRG 440
+ ++ A +VFE++K G+ Y L+ + ++ + +M
Sbjct: 302 -----ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 441 LNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDA 500
+ ++F+I + ++G+ EA + + + + +P++ YN L GL ++ +D
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 501 AMMLVRDCLGNVAS---GPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICS 557
A+ L GN+ S PT + Y + I + +SG++ +E +M +G PN V C+
Sbjct: 417 ALEL----FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 558 AIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
A + + K G EA+++F L++ L+ ++ T
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 178/432 (41%), Gaps = 45/432 (10%)
Query: 159 AYCLSRNNLFRAADQVPEL--------MDSQGRIAEMLEILEKMRRN-LCKPDVFAYTAM 209
AY + N L+ ADQ L + ++ I + E++ N +C+ +
Sbjct: 696 AYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Query: 210 IRVLAAERNLDACLRVWEEMKKDL-VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENG 268
IR N+ ++E+ KDL V+ + Y LI GL + + ++F ++K G
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 269 ILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAY 328
+ D A Y L++ GK+ + +L K++ A+ +N +I GL + D A
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875
Query: 329 KLFEVTVQD-DLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFL 387
L+ + D D +P T PL+ ++ GR+ + ++ FE +
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRL------------------YEAKQLFEGM 917
Query: 388 VGKEERIMMALDVFEELKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNS 447
+ R + IYNIL+ + GE A LF +M + +
Sbjct: 918 LDYGCR----------------PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 448 LSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRD 507
++S+ + C G + E ++ E P V YN + GL K ++ A++L +
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 508 CLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHG 567
+ P + Y IL++ +G E+ ++ NE+ + G PN +A+I G G
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Query: 568 TLEEARKVFTNL 579
E A V+ +
Sbjct: 1082 KPEHAYAVYQTM 1093
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 186/449 (41%), Gaps = 27/449 (6%)
Query: 145 QKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVF 204
QKG N ++N L CL +N+ + L++L KM C PDVF
Sbjct: 601 QKGCPPNTITFNTLFDCLCKND----------------EVTLALKMLFKMMDMGCVPDVF 644
Query: 205 AYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREM 264
Y +I L + + + +MKK LV D + TL+ G+ K + +++
Sbjct: 645 TYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Query: 265 KENGILIDRA---IYGVLIEGLVGEGKVGKACDLLKDLVDSGY-RADLGIYNSIIGGLCR 320
N D+ + LI ++ E + A + LV +G R I II C+
Sbjct: 704 LYN--CADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCK 761
Query: 321 VKQFDKAYKLFEVTVQD-DLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAAD 379
A LFE +D + P T N L+ E ++ + Q++
Sbjct: 762 HNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821
Query: 380 LEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPI-YNILMGALLEIGEVKKALYLFGK- 437
F GK +I ++++E+ + I +NI++ L++ G V AL L+
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 438 MRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGE 497
M + + ++ I +SG + EA + +++ P+ A YN L G K GE
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 498 IDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICS 557
DAA L + + P Y++ + +C G ++ + E+ + G P+ V +
Sbjct: 942 ADAACALFKRMVKE-GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 558 AIISGMCKHGTLEEARKVFTNLRERKLLT 586
II+G+ K LEEA +F ++ + +T
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGIT 1029
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 156/379 (41%), Gaps = 57/379 (15%)
Query: 129 ENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQV----------PE-- 176
NN + A F K G + +YN L L ++ A V P+
Sbjct: 762 HNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821
Query: 177 ----LMDS---QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEM 229
L+D+ G+I E+ E+ ++M + C+ + + +I L N+D L ++ ++
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 230 KKDL-VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGK 288
D Y LI GL K GR+ +LF M + G + AIY +LI G G+
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 289 VGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNP 348
AC L K +V G R DL Y+ ++ LC V + D+ F+ + L PD
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD------ 995
Query: 349 LLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELK-GK 407
+VC + L+ +GK R+ AL +F E+K +
Sbjct: 996 -VVC----------YNLIING------------------LGKSHRLEEALVLFNEMKTSR 1026
Query: 408 GYS-SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEA 466
G + + YN L+ L G V++A ++ +++ LE N +F+ I+ + SG A
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086
Query: 467 CECHNKIIEMSQVPSVAAY 485
+ ++ P+ Y
Sbjct: 1087 YAVYQTMVTGGFSPNTGTY 1105
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDL-VEADVMA 240
GR+ E L ++++ + PDV Y +I L L+ L ++ EMK + D+
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y +LI+ L G V +++ E++ G+ + + LI G GK A + + +V
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Query: 301 DSGYRADLGIYNSI 314
G+ + G Y +
Sbjct: 1095 TGGFSPNTGTYEQL 1108
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 140/634 (22%), Positives = 247/634 (38%), Gaps = 121/634 (19%)
Query: 89 ARFITDAFRKNQFQWGPQVVTELSKLR-RVTPDLVAEVLKVENNPTLASKFFHWAGKQKG 147
AR I DA +G + L + R +++ LV EVL++ P+ FF WAG+Q G
Sbjct: 101 ARAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIG 160
Query: 148 YKHNFASYNALAYCLSRNNLFRAADQVPELMDSQ-----------------------GRI 184
YKH YNAL + R++ ++VPE Q G
Sbjct: 161 YKHTAPVYNALVDLIVRDD----DEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSF 216
Query: 185 AEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMK-------------- 230
+ LE L +++ +P Y +I+ LD+ + EM
Sbjct: 217 SIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCF 276
Query: 231 -------------KDLVEA-----DVMAYVTLIMGLCKGGRVVRGHELFREMKENGILID 272
LVE D + Y LI GLC+ + M+ L +
Sbjct: 277 AYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336
Query: 273 RAIYGVLIEGLVGEGKVGK-----------------------------------ACDLLK 297
Y L+ G + + ++G+ A LLK
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Query: 298 DLVDSGYRADLGIYNSIIGGLCRVKQ------FDKAYKLFEVTVQDDLAPDFSTVNPLLV 351
+V G+ +YN +IG +C K D A K + + + + V+
Sbjct: 397 KMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTR 456
Query: 352 CCAEMGRMDNFFKLLAQMEKLKF-SVAADLEKFFEFLVGKEERIMMALDVFEELKGKGY- 409
C G+ + F ++ +M F + K +L ++ +A +FEE+K G
Sbjct: 457 CLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA-SKMELAFLLFEEMKRGGLV 515
Query: 410 SSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACEC 469
+ V Y I++ + + G +++A F +MR + N ++++ I ++++ + A E
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 470 HNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLG---------------NVAS 514
++ +P++ Y+ L G CK G+++ A + G + +
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635
Query: 515 GPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARK 574
P Y + C+S E+ ++L+ M+ EGC PN+++ A+I G+CK G L+EA++
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 575 VFTNLRERKLLTEANTIVYDEILIEHMKKKTADL 608
V T + E A Y ++ + K K DL
Sbjct: 696 VKTEMSEHGF--PATLYTYSSLIDRYFKVKRQDL 727
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 176/410 (42%), Gaps = 35/410 (8%)
Query: 180 SQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVM 239
S G+ + ++ +M PD Y+ ++ L ++ ++EEMK+ + ADV
Sbjct: 460 SAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 519
Query: 240 AYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDL 299
Y ++ CK G + + + F EM+E G + Y LI + KV A +L + +
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 300 VDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRM 359
+ G ++ Y+++I G C+ Q +KA ++FE PD +
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD----------------V 623
Query: 360 DNFFKLLAQMEKLK--FSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPI-YN 416
D +FK + + A L+ F K R+ A + + + +G I Y+
Sbjct: 624 DMYFKQYDDNSERPNVVTYGALLDGF-----CKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 417 ILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEM 476
L+ L ++G++ +A + +M ++S I + + A + +K++E
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 477 SQVPSVAAYNCLTKGLCKIGEIDAA-----MMLVRDCLGNVASGPTEFKYALTILHVCRS 531
S P+V Y + GLCK+G+ D A MM + C NV + Y I
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT------YTAMIDGFGMI 792
Query: 532 GEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRE 581
G+ E +E+L M +G PN V +I CK+G L+ A + +++
Sbjct: 793 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 195/474 (41%), Gaps = 69/474 (14%)
Query: 186 EMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLI 245
E ++ L +MR C P+V Y+ ++ ++ L C RV M + + +L+
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 246 MGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYR 305
C G ++L ++M + G + +Y +LI + G+ K CDLL DL + Y
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGD-KDSLNCDLL-DLAEKAYS 437
Query: 306 ADLGI--------YNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMG 357
L +S LC +++KA+ + + PD ST + +L
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497
Query: 358 RMDNFFKLLAQMEKLKFSVAADLEKFFEFL--VGKEERIMMALDVFEELKGKGYS-SVPI 414
+M+ F L +M++ + AD+ + + K I A F E++ G + +V
Sbjct: 498 KMELAFLLFEEMKR--GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 415 YNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACE-----C 469
Y L+ A L+ +V A LF M N +++S I H ++G + +AC+ C
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 470 HNKII-----------EMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTE 518
+K + + S+ P+V Y L G CK ++ A L+ D + P +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL-DAMSMEGCEPNQ 674
Query: 519 FKYALTILHVCRSGEAEKIIEVLNEMTQEG------------------------------ 548
Y I +C+ G+ ++ EV EM++ G
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 549 -----CPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEIL 597
C PN VI + +I G+CK G +EA K+ + E+ + N + Y ++
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG--CQPNVVTYTAMI 786
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 178/425 (41%), Gaps = 41/425 (9%)
Query: 151 NFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMI 210
N +Y+AL + A Q+ E M + ++ ++ N +P+V Y A++
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646
Query: 211 RVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGIL 270
++ ++ + M + E + + Y LI GLCK G++ E+ EM E+G
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 706
Query: 271 IDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKL 330
Y LI+ + A +L ++++ ++ IY +I GLC+V + D+AYKL
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Query: 331 FEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGK 390
++ + P+ T ++ D F G
Sbjct: 767 MQMMEEKGCQPNVVTYTAMI---------DGF--------------------------GM 791
Query: 391 EERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLS 449
+I L++ E + KG + + Y +L+ + G + A L +M+ + ++
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851
Query: 450 FSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCL 509
+ I+ + + +E+ ++I + P ++ Y L L K ++ A+ L+ + +
Sbjct: 852 YRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE-V 908
Query: 510 GNVASGPTEFK--YALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHG 567
++ ++ Y I +C + + E ++ +EMT++G P ++I G+ ++
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Query: 568 TLEEA 572
+ EA
Sbjct: 969 KISEA 973
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 126 LKVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIA 185
L V +N K HW GY+ +N E ++S G
Sbjct: 830 LDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN------------------KEFIESLG--- 868
Query: 186 EMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEM---KKDLVEADVMAYV 242
+L+++ ++ P + Y +I L + L+ LR+ EE+ LV+ Y
Sbjct: 869 ----LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS-TYN 923
Query: 243 TLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLL 296
+LI LC +V +LF EM + G++ + + LI+GL K+ +A LL
Sbjct: 924 SLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 178/401 (44%), Gaps = 37/401 (9%)
Query: 180 SQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVM 239
S+G++ L++L ++ + C+P V YT +I E +D L++ +EM ++ D+
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 240 AYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDL 299
Y T+I G+CK G V R E+ R ++ G D Y +L+ L+ +GK + L+ +
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 300 VDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRM 359
++ Y+ +I LCR + ++A L ++ + L PD + +PL+ GR+
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Query: 360 DNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKG-YSSVPIYNIL 418
D +A++ E + G + YN +
Sbjct: 385 D-----------------------------------VAIEFLETMISDGCLPDIVNYNTV 409
Query: 419 MGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQ 478
+ L + G+ +AL +FGK+ + NS S++ SGD + A +++
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 479 VPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKII 538
P YN + LC+ G +D A L+ D + + P+ Y + +L C++ E I
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVD-MRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528
Query: 539 EVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNL 579
VL M GC PNE + +I G+ G EA ++ +L
Sbjct: 529 NVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 183/416 (43%), Gaps = 41/416 (9%)
Query: 183 RIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYV 242
+ ++EILEK +PDVFAY A+I +D RV + M+ D + Y
Sbjct: 142 KAVRVMEILEK----FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 197
Query: 243 TLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDS 302
+I LC G++ ++ ++ + Y +LIE + EG V +A L+ +++
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 303 GYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNF 362
G + D+ YN+II G+C+ D+A+++ PD + N LL G+ +
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 363 FKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNILMGAL 422
KL+ +M FS D +V Y+IL+ L
Sbjct: 318 EKLMTKM----FSEKCD------------------------------PNVVTYSILITTL 343
Query: 423 LEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSV 482
G++++A+ L M+ L ++ S+ I G + A E +I +P +
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 483 AAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLN 542
YN + LCK G+ D A+ + LG V P Y + SG+ + + ++
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGK-LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 543 EMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILI 598
EM G P+E+ +++IS +C+ G ++EA ++ ++R + + + Y+ +L+
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF--HPSVVTYNIVLL 516
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 148/334 (44%), Gaps = 3/334 (0%)
Query: 249 CKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADL 308
C+ G + L M G D + LI+G + KA +++ L G + D+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 309 GIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQ 368
YN++I G C++ + D A ++ + D +PD T N ++ G++D K+L Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 369 MEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGE 427
+ E + AL + +E+ +G + YN ++ + + G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 428 VKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNC 487
V +A + + E + +S++I ++ + G E + K+ P+V Y+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 488 LTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQE 547
L LC+ G+I+ AM L++ + P + Y I CR G + IE L M +
Sbjct: 339 LITTLCRDGKIEEAMNLLK-LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 548 GCPPNEVICSAIISGMCKHGTLEEARKVFTNLRE 581
GC P+ V + +++ +CK+G ++A ++F L E
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 138/306 (45%), Gaps = 7/306 (2%)
Query: 178 MDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEAD 237
M +G + E++ + C+PDV +Y ++R L + + ++ +M + + +
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 238 VMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLK 297
V+ Y LI LC+ G++ L + MKE G+ D Y LI EG++ A + L+
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 298 DLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMG 357
++ G D+ YN+++ LC+ + D+A ++F + +P+ S+ N + G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 358 RMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEEL----KGKGYSSVP 413
D L +E + + D E + ++ R M + FE L + + SV
Sbjct: 453 --DKIRALHMILEMMSNGIDPD-EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 414 IYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKI 473
YNI++ + ++ A+ + M G N ++++ I+ +G EA E N +
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Query: 474 IEMSQV 479
+ + +
Sbjct: 570 VRIDAI 575
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 19/220 (8%)
Query: 144 KQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDS-------------------QGRI 184
K+KG + SY+ L R A + E M S G+
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 185 AEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTL 244
+ LEI K+ C P+ +Y M L + + L + EM + ++ D + Y ++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 245 IMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGY 304
I LC+ G V EL +M+ Y +++ G ++ A ++L+ +V +G
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 305 RADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFS 344
R + Y +I G+ +A +L V+ D ++S
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYS 579
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 224/515 (43%), Gaps = 88/515 (17%)
Query: 188 LEILEKMRRNLCKPDVFAYTAMIRVLAAERNLD------------AC------------- 222
+E+ M +PDV+ YT +IR L ++L C
Sbjct: 212 MELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDG 271
Query: 223 ----LRVWEE--MKKDL----VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILID 272
+VWE +KKDL ++ DV+ Y TL+ GLCK G E+ EM
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS 331
Query: 273 RAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFE 332
A L+EGL GK+ +A +L+K +VD G +L +YN++I LC+ ++F +A LF+
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFD 391
Query: 333 VTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQM--EKLKFSV-------------- 376
+ L P+ T + L+ G++D L +M LK SV
Sbjct: 392 RMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451
Query: 377 -AADLEKFFEFLVGK------------------EERIMMALDVFEELKGKGYS-SVPIYN 416
+ E F ++ K + +I AL ++ E+ GKG + S+ +
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 417 ILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEM 476
L+ L G ++ A+ LF +M N++ N +++++ I+ + E GD+ +A E ++ E
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 477 SQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEK 536
VP +Y L GLC G+ A + V D L E Y + CR G+ E+
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFV-DGLHKGNCELNEICYTGLLHGFCREGKLEE 630
Query: 537 IIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNL----RERKLLTEANTIV 592
+ V EM Q G + V +I G KH + RK+F L +R L + + ++
Sbjct: 631 ALSVCQEMVQRGVDLDLVCYGVLIDGSLKH----KDRKLFFGLLKEMHDRGL--KPDDVI 684
Query: 593 YDEILIEHMKKKTADLVLSGLKFFGLESKLKAKGC 627
Y ++ K KT D + FG+ + +GC
Sbjct: 685 YTSMI--DAKSKTGDFK----EAFGIWDLMINEGC 713
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/531 (21%), Positives = 234/531 (44%), Gaps = 43/531 (8%)
Query: 98 KNQFQWGPQVVTELSKLRRVTPDLVAEVLKVENNPTLASKFFHWAGKQKGYKHNFASYNA 157
+ + W + +EL R T + ++ ++P L +FF++ G +G+ H+ AS+
Sbjct: 50 RGKRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCI 109
Query: 158 LAYCLSRNNLFRAADQVPE---------------------------------LMDSQGRI 184
L + L + NLF A + + L+ R
Sbjct: 110 LIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRS 169
Query: 185 AEMLEILEKMRRNLCK----PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
+L+ + + + K P+V +A++ L R+ + ++ +M + DV
Sbjct: 170 RRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYI 229
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y +I LC+ + R E+ M+ G ++ Y VLI+GL + KV +A + KDL
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA 289
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD 360
+ D+ Y +++ GLC+V++F+ ++ + + +P + V+ L+ + G+++
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 361 NFFKLLAQMEKLKFSVAADLEKFFEFL--VGKEERIMMALDVFEELKGKGYSSVPI-YNI 417
L+ ++ + F V+ +L + + + K + A +F+ + G + Y+I
Sbjct: 350 EALNLVKRV--VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 418 LMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMS 477
L+ G++ AL G+M L+++ ++ I H + GDI A ++I
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 478 QVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKI 537
P+V Y L G C G+I+ A+ L + G P+ + + + + R+G
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 538 IEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEA 588
+++ NEM + PN V + +I G C+ G + +A + + E+ ++ +
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 204/467 (43%), Gaps = 54/467 (11%)
Query: 165 NNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLR 224
N+L + ++ ++G +AEM+ +K+ +P V YT+++ ++ ++ LR
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMIN--KKL-----EPTVVTYTSLMGGYCSKGKINKALR 493
Query: 225 VWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLV 284
++ EM + + + TL+ GL + G + +LF EM E + +R Y V+IEG
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553
Query: 285 GEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFS 344
EG + KA + LK++ + G D Y +I GLC Q +A + + + +
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613
Query: 345 TVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG----KEERIMMALDV 400
LL G+++ + +M ++ V DL + + G K+ ++ L
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEM--VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGL-- 669
Query: 401 FEELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVE 459
+E+ +G IY ++ A + G+ K+A ++ M N ++++ I +
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 460 SG------------------------------------DILEACECHNKIIEMSQVPSVA 483
+G D+ +A E HN I++ + + A
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTA 788
Query: 484 AYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNE 543
YN L +G C+ G I+ A L+ +G+ S P Y I +CR + +K IE+ N
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVS-PDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 544 MTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
MT++G P+ V + +I G C G + +A ++ + + L+ T
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 177/408 (43%), Gaps = 10/408 (2%)
Query: 170 AADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEM 229
A + E + +G+I E L +++++ P++F Y A+I L R +++ M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 230 KKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKV 289
K + + + Y LI C+ G++ EM + G+ + Y LI G G +
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453
Query: 290 GKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPL 349
A + ++++ + Y S++GG C + +KA +L+ +AP T L
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Query: 350 LVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGK 407
L G + + KL +M +++V + + + G +E + A + +E+ K
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMA--EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 408 GYSSVP---IYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDIL 464
G VP Y L+ L G+ +A + N E+N + ++ + G +
Sbjct: 572 GI--VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 465 EACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALT 524
EA ++++ + Y L G K + L+++ + + P + Y
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE-MHDRGLKPDDVIYTSM 688
Query: 525 ILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEA 572
I ++G+ ++ + + M EGC PNEV +A+I+G+CK G + EA
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 16/125 (12%)
Query: 146 KGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFA 205
KG N A+YN L R QGRI E E++ +M + PD
Sbjct: 781 KGLLANTATYNMLIRGFCR----------------QGRIEEASELITRMIGDGVSPDCIT 824
Query: 206 YTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMK 265
YT MI L ++ + +W M + + D +AY TLI G C G + + EL EM
Sbjct: 825 YTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Query: 266 ENGIL 270
G++
Sbjct: 885 RQGLI 889
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 227/510 (44%), Gaps = 45/510 (8%)
Query: 147 GYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQG-------------------RIAEM 187
G HN +Y+ L C R + A V M G RI++
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 188 LEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMG 247
+ ++ +M +PD F + +I L + + + M + D++ Y ++ G
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 248 LCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRAD 307
LCK G + L ++M++ I IY +I+ L V A +L ++ + G R +
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 308 LGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLA 367
+ YNS+I LC ++ A +L ++ + P+ T + L+ + G++ KL
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 368 QMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKG-YSSVPIYNILMGALLE 424
+M +K S+ D+ + + G +R+ A +FE + K + +V YN L+ +
Sbjct: 351 EM--IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 425 IGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQ------ 478
V + + LF +M L N+++++ I +A EC N I Q
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIH------GFFQARECDNAQIVFKQMVSDGV 462
Query: 479 VPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKII 538
+P + Y+ L GLC G+++ A+ +V + L P + Y + I +C++G+ E
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETAL-VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 539 EVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILI 598
++ ++ +G PN V + ++SG C+ G EEA +F ++E L ++ T Y+ ++
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT--YNTLIR 579
Query: 599 EHM----KKKTADLV--LSGLKFFGLESKL 622
H+ K +A+L+ + +F G S +
Sbjct: 580 AHLRDGDKAASAELIREMRSCRFVGDASTI 609
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 120/527 (22%), Positives = 218/527 (41%), Gaps = 77/527 (14%)
Query: 97 RKNQFQWGPQVVTELSKLRRVTPDLVA--EVLKVENNPTLASKFFHWAGK--QKGYKHNF 152
R++Q V+ ++ KL PD+V +L + S G+ + GY+ +
Sbjct: 128 RRSQLSLALAVLAKMMKLG-YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186
Query: 153 ASYNALAYCLSRNNLFRAADQV------------PELMD---------SQGRIAEMLEIL 191
++N L + L R+N RA++ V P+L+ +G I L +L
Sbjct: 187 FTFNTLIHGLFRHN--RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 192 EKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKG 251
+KM + +P V Y +I L +N++ L ++ EM + +V+ Y +LI LC
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 252 GRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIY 311
GR L +M E I + + LI+ V EGK+ +A L +++ D+ Y
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 312 NSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEK 371
+S+I G C + D+A +FE+ + D P+ T N L+ + R+D +L +M +
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 372 LKF-----SVAADLEKFFEFLVGKEERIMMALDVFEELKGKG-YSSVPIYNILMGALLEI 425
+ + FF+ +I VF+++ G + Y+IL+ L
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQI-----VFKQMVSDGVLPDIMTYSILLDGLCNN 479
Query: 426 GEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAY 485
G+V+ AL +F ++ +E P + Y
Sbjct: 480 GKVETALVVFEYLQRSKME-----------------------------------PDIYTY 504
Query: 486 NCLTKGLCKIGEIDAAMMLVRDC-LGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEM 544
N + +G+CK G+++ L C L P Y + CR G E+ + EM
Sbjct: 505 NIMIEGMCKAGKVEDGWDLF--CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 545 TQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTI 591
+EG P+ + +I + G + ++ +R + + +A+TI
Sbjct: 563 KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 609
Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 173/396 (43%), Gaps = 12/396 (3%)
Query: 201 PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHEL 260
P + ++ ++ +A D + + E+M+ + ++ Y LI C+ ++ +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 261 FREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCR 320
+M + G D L+ G ++ A L+ +V+ GY+ D +N++I GL R
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 321 VKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADL 380
+ +A L + V PD T ++ + G +D LL +ME+ K +
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 381 EKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGKMR 439
+ + + AL++F E+ KG +V YN L+ L G A L M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 440 GLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEID 499
+ N ++FS I V+ G ++EA + ++++I+ S P + Y+ L G C +D
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 500 AA-----MMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEV 554
A +M+ +DC NV + Y I C++ ++ +E+ EM+Q G N V
Sbjct: 379 EAKHMFELMISKDCFPNVVT------YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 555 ICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
+ +I G + + A+ VF + +L + T
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 165/392 (42%), Gaps = 8/392 (2%)
Query: 219 LDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGV 278
LD + ++ +M K ++ + L+ + K + L +M+ GI + Y +
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 279 LIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDD 338
LI ++ A +L ++ GY D+ NS++ G C + A L V+
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 339 LAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMM 396
PD T N L+ R L+ +M + DL + + G K I +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRM--VVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 397 ALDVFEEL-KGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQ 455
AL + +++ +GK V IYN ++ AL V AL LF +M + N ++++ I+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 456 CHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASG 515
C G +A + +IE P+V ++ L K G++ A L + + +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SID 358
Query: 516 PTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKV 575
P F Y+ I C ++ + M + C PN V + +I G CK ++E ++
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 576 FTNLRERKLLTEANTIVYDEILIEHMKKKTAD 607
F + +R L+ NT+ Y ++ + + D
Sbjct: 419 FREMSQRGLV--GNTVTYTTLIHGFFQARECD 448
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 125/300 (41%), Gaps = 6/300 (2%)
Query: 288 KVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVN 347
K+ A +L D+V S + ++ ++ + ++ +FD L E ++ + T +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 348 PLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELK 405
L+ C ++ +LA+M KL + D+ L G RI A+ + ++
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYE--PDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 406 GKGYSSVPI-YNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDIL 464
GY +N L+ L +A+ L +M + + +++ I + + GDI
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 465 EACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALT 524
A K+ + P V YN + LC ++ A+ L + + N P Y
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE-MDNKGIRPNVVTYNSL 297
Query: 525 ILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKL 584
I +C G +L++M + PN V SA+I K G L EA K++ + +R +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 176 ELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVE 235
E M G++ + ++ + KP+V YT M+ + + ++ EMK++
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 236 ADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKA 292
D Y TLI + G EL REM+ + D + G L+ ++ +G++ K+
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLDKS 624
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 183/380 (48%), Gaps = 17/380 (4%)
Query: 177 LMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEA 236
L DS G++ + +E+L++M + C PDV YT +I + + +++ +EM+
Sbjct: 214 LCDS-GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 237 DVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLL 296
DV+ Y L+ G+CK GR+ + +M +G + + +++ + G+ A LL
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 297 KDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEM 356
D++ G+ + +N +I LCR +A + E Q P+ + NPLL +
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 357 GRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYSSVPI 414
+MD + L +M + D+ + L K+ ++ A+++ +L KG S V I
Sbjct: 393 KKMDRAIEYLERM--VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI 450
Query: 415 -YNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKI 473
YN ++ L + G+ KA+ L +MR +L+ +++++S + G + EA + ++
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510
Query: 474 IEMSQVPSVAAYNCLTKGLCKIGEIDAAM-----MLVRDCLGNVASGPTEFKYALTILHV 528
M P+ +N + GLCK + D A+ M+ R C P E Y + I +
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC------KPNETSYTILIEGL 564
Query: 529 CRSGEAEKIIEVLNEMTQEG 548
G A++ +E+LNE+ +G
Sbjct: 565 AYEGMAKEALELLNELCNKG 584
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 186/411 (45%), Gaps = 9/411 (2%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAY 241
G I L +L++M PDV Y ++R L L + V + M + DV+ Y
Sbjct: 186 GEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
LI C+ V +L EM++ G D Y VL+ G+ EG++ +A L D+
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDN 361
SG + ++ +N I+ +C ++ A KL ++ +P T N L+ G +
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 362 FFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKG-YSSVPIYNIL 418
+L +M + + + L G KE+++ A++ E + +G Y + YN +
Sbjct: 363 AIDILEKMP--QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420
Query: 419 MGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQ 478
+ AL + G+V+ A+ + ++ ++++ I ++G +A + +++
Sbjct: 421 LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Query: 479 VPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKII 538
P Y+ L GL + G++D A+ + + P + +L +C+S + ++ I
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHE-FERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 539 EVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEAN 589
+ L M GC PNE + +I G+ G +EA ++ L + L+ +++
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 207/497 (41%), Gaps = 23/497 (4%)
Query: 133 TLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILE 192
TL+S + + G G+ + S AL S N+L + M G + E + LE
Sbjct: 77 TLSSGYSNSNGN--GHYSSVNSSFALEDVESNNHLRQ--------MVRTGELEEGFKFLE 126
Query: 193 KMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGG 252
M + PD+ T +IR ++ E ++ DV+ Y +I G CK G
Sbjct: 127 NMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG 186
Query: 253 RVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYN 312
+ + M + D Y ++ L GK+ +A ++L ++ D+ Y
Sbjct: 187 EINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 313 SIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKL 372
+I CR A KL + PD T N L+ + GR+D K L M
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 373 KFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKA 431
+ R M A + ++ KG+S SV +NIL+ L G + +A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 432 LYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKG 491
+ + KM + NSLS++ + + + A E +++ P + YN +
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 492 LCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPP 551
LCK G+++ A+ ++ L + P Y I + ++G+ K I++L+EM + P
Sbjct: 424 LCKDGKVEDAVEILNQ-LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 552 NEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEHMKKKTADLVLS 611
+ + S+++ G+ + G ++EA K F ++ N + ++ I++ K + D +
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEF--ERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Query: 612 GLKFFGLESKLKAKGCK 628
L F + +GCK
Sbjct: 541 FLVF------MINRGCK 551
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 123/527 (23%), Positives = 233/527 (44%), Gaps = 45/527 (8%)
Query: 113 KLRRVTPDLVAEVLK-VENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAA 171
+L P+L+ VL + P +A +FF+W +Q K + ++ A+ L+ N+L A
Sbjct: 79 RLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEA 138
Query: 172 DQVPE-------------LMD-------------------SQGRIAE-MLEILEKMRRNL 198
V E L+D ++ +AE L EKM R
Sbjct: 139 YLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKG 198
Query: 199 CKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGH 258
P V +++VL R ++ V+E M + + V+ + T++ K G + R
Sbjct: 199 FLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVD 258
Query: 259 ELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGL 318
+++ EMK I Y +LI G GK+ +A D+ SG+ +N +I G
Sbjct: 259 KIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGY 318
Query: 319 CRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAA 378
C+ FD A+ + + + + P ST N + + GR+D+ +LL+ M A
Sbjct: 319 CKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM------AAP 372
Query: 379 DLEKFFEFLVG--KEERIMMALDVFEELK-GKGYSSVPIYNILMGALLEIGEVKKALYLF 435
D+ + + G K + + A +F++L+ G + S+ YN L+ L E G ++ A L
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 436 GKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKI 495
+M + + ++++ ++ V++G++ A E +++++ P AY G ++
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 496 GEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVI 555
G+ D A L + + P Y + I +C+ G K IE ++ + G P+ V
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 556 CSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEHMK 602
+ +I G ++G + AR ++ + ++L + I Y ++ H K
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLY--PSVITYFVLIYGHAK 597
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/483 (20%), Positives = 195/483 (40%), Gaps = 74/483 (15%)
Query: 190 ILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLC 249
+ E M + P V + M+ +L+ ++W EMK+ +E + Y LI G
Sbjct: 225 VYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFS 284
Query: 250 KGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKA----------------- 292
K G++ +M+ +G + + LIEG +G A
Sbjct: 285 KNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTS 344
Query: 293 ---------CDL-----LKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDD 338
CD ++L+ S D+ YN+++ G ++ +F +A LF+ D
Sbjct: 345 TYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGD 404
Query: 339 LAPDFSTVNPLLVCCAEMGRMDNFFKLLAQME-KLKFSVAADLEKFFEFLVGKEERIMMA 397
+ P T N L+ E G ++ +L +M +L F + V K + MA
Sbjct: 405 IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV-KNGNLSMA 463
Query: 398 LDVFEELKGKG-------YSS------------------------------VPIYNILMG 420
+V++E+ KG Y++ + IYN+ +
Sbjct: 464 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 523
Query: 421 ALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVP 480
L ++G + KA+ K+ + L + ++++ I+ ++E+G A +++++ P
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 583
Query: 481 SVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEV 540
SV Y L G K G ++ A + + P + + +C++G ++
Sbjct: 584 SVITYFVLIYGHAKAGRLEQAFQYSTE-MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY 642
Query: 541 LNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEH 600
L +M +EG PPN+ + +IS C EE K++ + ++++ + T L +H
Sbjct: 643 LCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT---HRALFKH 699
Query: 601 MKK 603
++K
Sbjct: 700 LEK 702
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 178/408 (43%), Gaps = 49/408 (12%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAY-TAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
GRI + E+L M PDV +Y T M + + ++A L ++++++ + ++
Sbjct: 357 GRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASL-LFDDLRAGDIHPSIVT 411
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y TLI GLC+ G + L EM I D Y L++G V G + A ++ +++
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTV-QDDLAPDFSTVNPLLVCCAEMGRM 359
G + D Y + G R+ DKA++L E V D APD + N R+
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV---------RI 522
Query: 360 DNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNILM 419
D K+ ++ ++F K F R+ + D Y ++
Sbjct: 523 DGLCKVGNLVKAIEFQ-----RKIF--------RVGLVPDHV------------TYTTVI 557
Query: 420 GALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQV 479
LE G+ K A L+ +M L + +++ + I H ++G + +A + ++ +
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Query: 480 PSVAAYNCLTKGLCKIGEIDAAMMLVRDC-LGNVASGPTEFKYALTILHVCRSGEAEKII 538
P+V +N L G+CK G ID A + C + P ++ Y + I C + E+++
Sbjct: 618 PNVMTHNALLYGMCKAGNIDEAYRYL--CKMEEEGIPPNKYSYTMLISKNCDFEKWEEVV 675
Query: 539 EVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLT 586
++ EM + P+ A+ + K E+R+V ER LL+
Sbjct: 676 KLYKEMLDKEIEPDGYTHRALFKHLEKD---HESREV--EFLERLLLS 718
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 123/570 (21%), Positives = 251/570 (44%), Gaps = 51/570 (8%)
Query: 27 TVYGGLFSNRQSLRNPNSASEPHQSPPFNVQKWDPHYLPNQKTQSPPSDPKTFQLQRHLS 86
+ YG +FS+ + S E +S ++++ D L + T+S P P+ R S
Sbjct: 22 SCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPR-PRLIDFSRLFS 80
Query: 87 PIAR-----FITDAFRKNQFQWGPQVVTELSKLRRVTPDLVAEVLKVENNPTLASKFFHW 141
+AR + D ++ + + + LS + + K+ S F
Sbjct: 81 VVARTKQYDLVLDLCKQMELKGIAHNLYTLS----IMINCCCRCRKL-------SLAFSA 129
Query: 142 AGK--QKGYKHNFASYNAL--AYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRN 197
GK + GY+ + +++ L CL +GR++E LE++++M
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCL------------------EGRVSEALELVDRMVEM 171
Query: 198 LCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRG 257
KP + A++ L + + + + M + + + + Y ++ +CK G+
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 258 HELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGG 317
EL R+M+E I +D Y ++I+GL +G + A +L ++ G++AD+ IY ++I G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 318 LCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVA 377
C ++D KL ++ + PD + L+ C + G++ +L +M ++ ++
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM--IQRGIS 349
Query: 378 ADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALYL 434
D + + G KE ++ A + + + KG ++ +NIL+ + + L L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 435 FGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCK 494
F KM + ++++++ IQ E G + A E +++ P + +Y L GLC
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 495 IGEIDAAMMLVRDCLGNVASGPTEFK---YALTILHVCRSGEAEKIIEVLNEMTQEGCPP 551
GE + A+ + + E Y + I +C + + + ++ + +G P
Sbjct: 470 NGEPEKALEIFE----KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 552 NEVICSAIISGMCKHGTLEEARKVFTNLRE 581
+ + +I G+CK G+L EA +F + E
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 190/402 (47%), Gaps = 6/402 (1%)
Query: 186 EMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLI 245
+ +++ ++M R+ +P + ++ + V+A + D L + ++M+ + ++ +I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 246 MGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYR 305
C+ ++ ++ + G D + LI GL EG+V +A +L+ +V+ G++
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 306 ADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKL 365
L N+++ GLC + A L + V+ P+ T P+L + G+ +L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 366 LAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGY-SSVPIYNILMGAL 422
L +ME+ K + D K+ + G K+ + A ++F E++ KG+ + + IY L+
Sbjct: 235 LRKMEERK--IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 423 LEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSV 482
G L M + + ++FS I C V+ G + EA E H ++I+ P
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 483 AAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLN 542
Y L G CK ++D A ++ D + + GP + + I C++ + +E+
Sbjct: 353 VTYTSLIDGFCKENQLDKANHML-DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 543 EMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKL 584
+M+ G + V + +I G C+ G LE A+++F + R++
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 137/307 (44%), Gaps = 26/307 (8%)
Query: 102 QW--GPQVVTELSKLRRVTPDLVAEVLKVE----NNPTLASKFFHWAGKQKGYKHNFASY 155
+W G +++ ++ K R++TPD+VA ++ ++ H Q+G + +Y
Sbjct: 297 RWDDGAKLLRDMIK-RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 156 NALAYCLSRNNLFRAADQVPELMDSQG-------------------RIAEMLEILEKMRR 196
+L + N A+ + +LM S+G I + LE+ KM
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 197 NLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVR 256
D Y +I+ L+ +++EM V D+++Y L+ GLC G +
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 257 GHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIG 316
E+F +++++ + +D IY ++I G+ KV A DL L G + D+ YN +IG
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 317 GLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSV 376
GLC+ +A LF +D +P+ T N L+ G KL+ ++++ FSV
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595
Query: 377 AADLEKF 383
A K
Sbjct: 596 DASTVKM 602
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 135/319 (42%), Gaps = 8/319 (2%)
Query: 292 ACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLV 351
A DL +++ S R L ++ + + R KQ+D L + +A + T++ ++
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 352 CCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGY 409
CC ++ F + ++ KL + D F + G E R+ AL++ + + G+
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYE--PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 410 SSVPI-YNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACE 468
I N L+ L G+V A+ L +M + N +++ ++ +SG A E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 469 CHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHV 528
K+ E Y+ + GLCK G +D A L + + Y I
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE-MEIKGFKADIIIYTTLIRGF 292
Query: 529 CRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEA 588
C +G + ++L +M + P+ V SA+I K G L EA ++ + +R +
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI--SP 350
Query: 589 NTIVYDEILIEHMKKKTAD 607
+T+ Y ++ K+ D
Sbjct: 351 DTVTYTSLIDGFCKENQLD 369
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/526 (23%), Positives = 220/526 (41%), Gaps = 69/526 (13%)
Query: 119 PDLVAEVLKVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELM 178
P V V+K + +P A + F+ K+ G+KH ++Y ++ L F A ++V L+
Sbjct: 7 PKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEV--LV 64
Query: 179 D----------------------SQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAE 216
D +G++ E + + E+M C+P VF+Y A++ VL
Sbjct: 65 DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS 124
Query: 217 RNLD-----------------------------------ACLRVWEEMKKDLVEADVMAY 241
D A LR+ M E +V+AY
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
T++ G + G+ELF +M +G+ + + + L+ L +G V + LL ++
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDN 361
G +L YN I GLC+ + D A ++ ++ PD T N L+ + +
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 362 FFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYSSVP---IYN 416
L +M + + D + + G K + +A + + G+ VP Y
Sbjct: 305 AEVYLGKM--VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF--VPDQFTYR 360
Query: 417 ILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEM 476
L+ L GE +AL LF + G ++ N + ++ I+ G ILEA + N++ E
Sbjct: 361 SLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK 420
Query: 477 SQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEK 536
+P V +N L GLCK+G + A LV+ + P F + + I + E
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK-GYFPDIFTFNILIHGYSTQLKMEN 479
Query: 537 IIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRER 582
+E+L+ M G P+ +++++G+CK E+ + + + E+
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 187/459 (40%), Gaps = 60/459 (13%)
Query: 133 TLASKFFHWAGKQKGYK---HNFASYNALAYCLSR-NNLFRAADQVPELMDSQGRIAEML 188
T+ F+ K +GY+ AS ++ CLS N L R ++ +G + E
Sbjct: 186 TVVGGFYEENFKAEGYELFGKMLAS--GVSLCLSTFNKLLR-------VLCKKGDVKECE 236
Query: 189 EILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGL 248
++L+K+ + P++F Y I+ L LD +R+ + + + DV+ Y LI GL
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 249 CKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADL 308
CK + +M G+ D Y LI G G V A ++ D V +G+ D
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 309 GIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQ 368
Y S+I GLC + ++A LF + + P+ N L+ + G
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG----------- 405
Query: 369 MEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGY-SSVPIYNILMGALLEIGE 427
I+ A + E+ KG V +NIL+ L ++G
Sbjct: 406 ------------------------MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 428 VKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNC 487
V A L M + +F+I I + + A E + +++ P V YN
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 488 LTKGLCKIGEIDAAM-----MLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLN 542
L GLCK + + M M+ + C P F + + + +CR + ++ + +L
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGC------APNLFTFNILLESLCRYRKLDEALGLLE 555
Query: 543 EMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRE 581
EM + P+ V +I G CK+G L+ A +F + E
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 205/469 (43%), Gaps = 58/469 (12%)
Query: 145 QKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAE---------------MLE 189
++G K + +YN L Y L +N+ F+ A+ M ++G + M++
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 190 ILEKMRR----NLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLI 245
+ E++ N PD F Y ++I L E + L ++ E ++ +V+ Y TLI
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 246 MGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYR 305
GL G ++ +L EM E G++ + + +L+ GL G V A L+K ++ GY
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 306 ADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKL 365
D+ +N +I G + + A ++ +V + + + PD T N LL + + ++
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED---- 514
Query: 366 LAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLE 424
++ ++ + KG + ++ +NIL+ +L
Sbjct: 515 -------------------------------VMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 425 IGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQV-PSVA 483
++ +AL L +M+ ++ ++++F I ++GD+ A K+ E +V S
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP 603
Query: 484 AYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNE 543
YN + + + A L ++ + + GP + Y L + C++G + L E
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMV-DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 662
Query: 544 MTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEA-NTI 591
M + G P+ +I+ +C + EA + + ++ L+ EA NTI
Sbjct: 663 MMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTI 711
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 207/480 (43%), Gaps = 53/480 (11%)
Query: 147 GYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAY 206
G HN +YN L C R + +I+ L +L KM + +P +
Sbjct: 115 GISHNLYTYNILINCFCR----------------RSQISLALALLGKMMKLGYEPSIVTL 158
Query: 207 TAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKE 266
++++ + + + + ++M + D + + TLI GL + L M +
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 267 NGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDK 326
G + YGV++ GL G + A +LL + + A++ IY+++I LC+ + D
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 327 AYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQM----------------- 369
A LF + P+ T + L+ C R + +LL+ M
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 370 ----------------EKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKG-YS 410
E +K S+ D+ + + G +R+ A +FE + K +
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 411 SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECH 470
+V YN L+ + + + + LF +M L N+++++ I ++ D A
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 471 NKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCR 530
+++ P++ YN L GLCK G+++ A M+V + L PT + Y + I +C+
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA-MVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 531 SGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
+G+ E ++ ++ +G P+ +I + +ISG C+ G EEA +F +RE L ++ T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 194/469 (41%), Gaps = 55/469 (11%)
Query: 201 PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHEL 260
P +F + ++ +A + D + + E+M++ + ++ Y LI C+ ++ L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 261 FREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCR 320
+M + G L+ G ++ A L+ +V+ GYR D + ++I GL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 321 VKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADL 380
+ +A L + VQ P+ T ++ + G +D F LL +ME K +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 381 EKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGKMR 439
+ K AL++F E++ KG +V Y+ L+ L A L M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 440 GLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEID 499
+ N ++F+ I V+ G ++EA + ++++I+ S P + Y+ L G C +D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 500 AA-----MMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQ-------- 546
A +M+ +DC NV + Y I C++ ++ +E+ EM+Q
Sbjct: 383 EAKHMFELMISKDCFPNVVT------YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 547 ---------------------------EGCPPNEVICSAIISGMCKHGTLEEARKVFTNL 579
+G PN + + ++ G+CK+G LE+A VF L
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 580 RERKLLTEANTIVYDEILIEHMKKKTADLVLSGLKFFGLESKLKAKGCK 628
+ K+ TI I+IE M K A V G F L KG K
Sbjct: 497 QRSKM---EPTIYTYNIMIEGMCK--AGKVEDGWDLF---CSLSLKGVK 537
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 114/246 (46%), Gaps = 19/246 (7%)
Query: 144 KQKGYKHNFASYNALAYCLSRNNLFRAADQV----------------PELMDS---QGRI 184
+ KG + N +Y++L CL + A ++ L+D+ +G++
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 185 AEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTL 244
E ++ ++M + PD+F Y+++I LD ++E M +V+ Y TL
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 245 IMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGY 304
I G CK R+ G ELFREM + G++ + Y LI G A + K +V G
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 305 RADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFK 364
++ YN+++ GLC+ + +KA +FE + + P T N ++ + G++++ +
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 365 LLAQME 370
L +
Sbjct: 527 LFCSLS 532
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 3/208 (1%)
Query: 404 LKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDI 463
+K + S+ +N L+ A+ ++ + + L KM+ L + N +++I I C I
Sbjct: 77 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 136
Query: 464 LEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYAL 523
A K++++ PS+ + L G C I A+ LV D + + P +
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV-DQMVEMGYRPDTITFTT 195
Query: 524 TILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERK 583
I + +A + + +++ M Q GC PN V +++G+CK G ++ A + + K
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 584 LLTEANTIVYDEILIEHMKKKTADLVLS 611
+ EAN ++Y ++ K + D L+
Sbjct: 256 I--EANVVIYSTVIDSLCKYRHEDDALN 281
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 177/368 (48%), Gaps = 8/368 (2%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
G A L++ KM K V Y+ +I L + + D L ++ EM+ ++ADV+
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y +LI GLC G+ G ++ REM I+ D + LI+ V EGK+ +A +L +++
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD 360
G D YNS+I G C+ +A ++F++ V PD T + L+ + R+D
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 361 NFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGY-SSVPIYNI 417
+ +L ++ + + + ++G + ++ A ++F+E+ +G SV Y I
Sbjct: 403 DGMRLFREISSK--GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 418 LMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMS 477
L+ L + GE+ KAL +F KM+ + + ++I I + + +A + +
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 478 QVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTI-LHVCRSGEAEK 536
P V YN + GLCK G + A ML R + P +F Y + I H+ SG
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRK-MKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 537 IIEVLNEM 544
+E++ EM
Sbjct: 580 -VELIEEM 586
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 192/404 (47%), Gaps = 6/404 (1%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
+GR++E + ++++M +PD+ + +I L + + L + + M + + D +
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 212
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y ++ LCK G +LFR+M+E I Y ++I+ L +G A L ++
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD 360
G +AD+ Y+S+IGGLC ++D K+ + ++ PD T + L+ + G++
Sbjct: 273 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332
Query: 361 NFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNI 417
+L +M + +A D + + G KE + A +F+ + KG + Y+I
Sbjct: 333 EAKELYNEM--ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 418 LMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMS 477
L+ + + V + LF ++ L N+++++ + +SG + A E +++
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 478 QVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKI 537
PSV Y L GLC GE++ A+ + + + Y + I +C + + +
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI-YNIIIHGMCNASKVDDA 509
Query: 538 IEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRE 581
+ ++ +G P+ V + +I G+CK G+L EA +F ++E
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 177/401 (44%), Gaps = 2/401 (0%)
Query: 183 RIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYV 242
++ + +++ E M ++ P + + +A + D L + M+ + +E D+
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 243 TLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDS 302
+I C+ +++ + + G D + L+ G EG+V +A L+ +V+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 303 GYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNF 362
R DL +++I GLC + +A L + V+ PD T P+L + G
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 363 FKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGY-SSVPIYNILMGA 421
L +ME+ + + K+ AL +F E++ KG + V Y+ L+G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 422 LLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPS 481
L G+ + +M G N+ + ++FS I V+ G +LEA E +N++I P
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 482 VAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVL 541
YN L G CK + A + D + + P Y++ I C++ + + +
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMF-DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 542 NEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRER 582
E++ +G PN + + ++ G C+ G L A+++F + R
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 191/421 (45%), Gaps = 11/421 (2%)
Query: 200 KPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHE 259
+PD ++ ++ E + + + + M + D++ TLI GLC GRV
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 260 LFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLC 319
L M E G D YG ++ L G A DL + + + +A + Y+ +I LC
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 320 RVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAAD 379
+ FD A LF + D T + L+ G+ D+ K+L +M + ++ D
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM--IGRNIIPD 314
Query: 380 LEKFFEFL--VGKEERIMMALDVFEELKGKGYSSVPI-YNILMGALLEIGEVKKALYLFG 436
+ F + KE +++ A +++ E+ +G + I YN L+ + + +A +F
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 437 KMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIG 496
M E + +++SI I + ++ + + +I +P+ YN L G C+ G
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 497 EIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVIC 556
+++AA L ++ + P+ Y + + +C +GE K +E+ +M + I
Sbjct: 435 KLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 557 SAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEHMKKKT---ADLVLSGL 613
+ II GMC +++A +F +L ++ + + + + Y+ ++ KK + AD++ +
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGV--KPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Query: 614 K 614
K
Sbjct: 552 K 552
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 124/259 (47%), Gaps = 25/259 (9%)
Query: 99 NQFQW--GPQVVTELSKLRRVTPDLVA-----EVLKVENNPTLASKFFHWAGKQKGYKHN 151
N +W G +++ E+ R + PD+V +V V+ L +K + +G +
Sbjct: 292 NDGKWDDGAKMLREMIG-RNIIPDVVTFSALIDVF-VKEGKLLEAKELYNEMITRGIAPD 349
Query: 152 FASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIR 211
+YN+L + N A+Q+ +LM S+G C+PD+ Y+ +I
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKG----------------CEPDIVTYSILIN 393
Query: 212 VLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILI 271
+ +D +R++ E+ + + + Y TL++G C+ G++ ELF+EM G+
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 272 DRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLF 331
YG+L++GL G++ KA ++ + + S +GIYN II G+C + D A+ LF
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513
Query: 332 EVTVQDDLAPDFSTVNPLL 350
+ PD T N ++
Sbjct: 514 CSLSDKGVKPDVVTYNVMI 532
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 145 QKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQG-------------------RIA 185
KG N +YN L ++ AA ++ + M S+G +
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 186 EMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLI 245
+ LEI EKM+++ + Y +I + +D ++ + V+ DV+ Y +I
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 246 MGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYR 305
GLCK G + LFR+MKE+G D Y +LI +G + + +L++++ G+
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFS 592
Query: 306 ADLGIYNSIIGGLCRVKQFDKAY 328
AD +I L ++ DK++
Sbjct: 593 ADSSTIKMVIDMLSD-RRLDKSF 614
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 182/378 (48%), Gaps = 6/378 (1%)
Query: 174 VPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDL 233
V +M G+ A +E+L KM K D Y+ +I L +LD ++ EM+
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 234 VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKAC 293
+ +++ Y LI G C GR G +L R+M + I + + VLI+ V EGK+ +A
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 294 DLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCC 353
+L K+++ G D Y S+I G C+ DKA ++ ++ V P+ T N L+
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 354 AEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEE--RIMMALDVFEELKGKGY-S 410
+ R+D+ +L +M L+ V AD + + G E ++ +A ++F+E+ +
Sbjct: 414 CKANRIDDGLELFRKMS-LR-GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 411 SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECH 470
++ Y IL+ L + GE +KAL +F K+ +E++ ++I I + + +A +
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 471 NKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCR 530
+ P V YN + GLCK G + A +L R + P + Y + I
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK-MEEDGHAPDGWTYNILIRAHLG 590
Query: 531 SGEAEKIIEVLNEMTQEG 548
G+A K ++++ E+ + G
Sbjct: 591 DGDATKSVKLIEELKRCG 608
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 201/461 (43%), Gaps = 31/461 (6%)
Query: 146 KGYKHNFASYNALAYCLSRNN----LFRAADQVPEL---------------MDSQGRIAE 186
KG HN + + + C R F A ++ +L + +GR++E
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176
Query: 187 MLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIM 246
LE++++M KPD+ ++ L + + ++M + + + + Y ++
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 247 GLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRA 306
+CK G+ EL R+M+E I +D Y ++I+GL G + A +L ++ G
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 307 DLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLL 366
++ YN +IGG C ++D KL ++ + P+ T + L+ + G++ +L
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 367 AQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNILMGALL 423
+M + +A D + + G KE + A + + + KG ++ +NIL+
Sbjct: 357 KEM--IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 424 EIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVA 483
+ + L LF KM + ++++++ IQ E G + A E +++ P++
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 484 AYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFK---YALTILHVCRSGEAEKIIEV 540
Y L GLC GE + A+ + + E Y + I +C + + + ++
Sbjct: 475 TYKILLDGLCDNGESEKALEIFE----KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 541 LNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRE 581
+ +G P + +I G+CK G L EA +F + E
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 183/400 (45%), Gaps = 8/400 (2%)
Query: 201 PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHEL 260
P V ++ + +A + D L + ++M+ + ++ +I C+ ++
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 261 FREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCR 320
++ + G + + LI GL EG+V +A +L+ +V+ G++ DL N+++ GLC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 321 VKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADL 380
+ +A L + V+ P+ T P+L + G+ +LL +ME+ ++ D
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER--NIKLDA 263
Query: 381 EKFFEFLVG--KEERIMMALDVFEELKGKGYSS-VPIYNILMGALLEIGEVKKALYLFGK 437
K+ + G K + A ++F E++ KG ++ + YNIL+G G L
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 438 MRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGE 497
M + N ++FS+ I V+ G + EA E H ++I P Y L G CK
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 498 IDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICS 557
+D A +V D + + P + + I C++ + +E+ +M+ G + V +
Sbjct: 384 LDKANQMV-DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 558 AIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEIL 597
+I G C+ G L A+++F + RK+ N + Y +L
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKV--PPNIVTYKILL 480
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 26/305 (8%)
Query: 99 NQFQW--GPQVVTELSKLRRVTPDLVAEVLKVEN----NPTLASKFFHWAGKQKGYKHNF 152
N +W G +++ ++ K R++ P++V + +++ ++ H +G +
Sbjct: 310 NAGRWDDGAKLLRDMIK-RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 153 ASYNALAYCLSRNNLFRAADQVPELMDSQG-------------------RIAEMLEILEK 193
+Y +L + N A+Q+ +LM S+G RI + LE+ K
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 194 MRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGR 253
M D Y +I+ L+ +++EM V +++ Y L+ GLC G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 254 VVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNS 313
+ E+F +++++ + +D IY ++I G+ KV A DL L G + + YN
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 314 IIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLK 373
+IGGLC+ +A LF +D APD T N L+ G KL+ ++++
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 374 FSVAA 378
FSV A
Sbjct: 609 FSVDA 613
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 134/338 (39%), Gaps = 48/338 (14%)
Query: 279 LIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDD 338
L GLV + K A DL +D++ S + ++ + + + KQ+D L +
Sbjct: 60 LRSGLV-DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG 118
Query: 339 LAPDFSTVNPLLVC-------CAEMGRMDNFFKLLAQMEKLKFSVAAD------------ 379
+A + T++ ++ C C M KL + + FS +
Sbjct: 119 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 380 --LEKFFEF-----------------LVGKEERIMMALDVFEELKGKGYSSVP---IYNI 417
+++ E L GKE M+ +D E Y P Y
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE-----YGCQPNAVTYGP 233
Query: 418 LMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMS 477
++ + + G+ A+ L KM N++++++ +SI I + G + A N++
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 478 QVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKI 537
++ YN L G C G D L+RD + + P +++ I + G+ +
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN-PNVVTFSVLIDSFVKEGKLREA 352
Query: 538 IEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKV 575
E+ EM G P+ + +++I G CK L++A ++
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
G + LEI EK+ ++ + D+ Y +I + +D ++ + V+ V
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y +I GLCK G + LFR+M+E+G D Y +LI +G+G K+ L+++L
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Query: 301 DSGYRADLGIYNSII 315
G+ D +I
Sbjct: 606 RCGFSVDASTIKMVI 620
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 194/400 (48%), Gaps = 9/400 (2%)
Query: 190 ILEKMR-RNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGL 248
+L +M+ + LC P YT++I + N+D +R+ +EM D + +V+A +LI G
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349
Query: 249 CKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADL 308
CK +V LF +M++ G + + VLIE G++ KA + K + G +
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 309 GIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQ 368
++II G + ++ ++A KLF+ + + LA F N +L + G+ D +LL++
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGLANVF-VCNTILSWLCKQGKTDEATELLSK 468
Query: 369 MEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEI 425
ME + ++ + ++G +++ + +A VF + KG + Y+IL+
Sbjct: 469 MESR--GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN 526
Query: 426 GEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQV-PSVAA 484
+ + AL + M N+EVN + + I + G +A E +IE ++ S +
Sbjct: 527 HDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586
Query: 485 YNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEM 544
YN + G K GE+D+A+ + GN S P Y + +C++ ++ +E+ +EM
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGIS-PNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 545 TQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKL 584
+G + A+I G CK +E A +F+ L E L
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 178/414 (42%), Gaps = 42/414 (10%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
QG+ E E+L KM P+V +Y ++ ++N+D V+ + + ++ +
Sbjct: 456 QGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYT 515
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y LI G + E+ M + I ++ +Y +I GL G+ KA +LL +++
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Query: 301 DSGYR-ADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRM 359
+ YNSII G + + D A +E + ++P+ T L+ + RM
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635
Query: 360 DNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYN 416
D ++ +M+ V D+ + + G K + A +F EL +G + S PIYN
Sbjct: 636 DQALEMRDEMKNK--GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYN 693
Query: 417 ILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEM 476
L+ +G + AL L+ KM L + +++ I ++ G+++ A E + ++ +
Sbjct: 694 SLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV 753
Query: 477 SQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEK 536
VP Y + GL K G+ K
Sbjct: 754 GLVPDEIIYTVIVNGLSK------------------------------------KGQFVK 777
Query: 537 IIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
++++ EM + PN +I +A+I+G + G L+EA ++ + ++ +L + T
Sbjct: 778 VVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGAT 831
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 142/315 (45%), Gaps = 43/315 (13%)
Query: 182 GRIAEMLEILEKM--RRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVM 239
G+ ++ E+L M + LC +Y ++I E +D+ + +EEM + + +V+
Sbjct: 562 GQTSKARELLANMIEEKRLC-VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 240 AYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDL 299
Y +L+ GLCK R+ + E+ EMK G+ +D YG LI+G + A L +L
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 300 VDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRM 359
++ G IYNS+I G + A L++ ++D L D T L+
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI--------- 731
Query: 360 DNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVP---IYN 416
D K+ +++A +++ E++ G VP IY
Sbjct: 732 DGLL--------------------------KDGNLILASELYTEMQAVGL--VPDEIIYT 763
Query: 417 ILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEM 476
+++ L + G+ K + +F +M+ N+ N L ++ I H G++ EA H+++++
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823
Query: 477 SQVPSVAAYNCLTKG 491
+P A ++ L G
Sbjct: 824 GILPDGATFDILVSG 838
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 114/532 (21%), Positives = 218/532 (40%), Gaps = 58/532 (10%)
Query: 125 VLKVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCL--SRNNLFRAADQVPELMDSQG 182
+L NNP A +F++WA +G + + L + L S RA+D + + S
Sbjct: 79 LLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYV-STS 137
Query: 183 RIAEMLEILEKMRRNLCKPDVF-----AYTAMIRVLAAERNLDACLRVWEEMKKDLVEAD 237
M +L + K F A+ ++ + +R D + + +M +E D
Sbjct: 138 NPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM----LELD 193
Query: 238 VMAYVTLI----MGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKAC 293
V+ + + L + + EL+ M G+ D +L+ + E K +A
Sbjct: 194 VIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEAL 253
Query: 294 DLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDL-APDFSTVNPLLVC 352
++L ++ G D +Y+ + C+ A L + L P T +++
Sbjct: 254 EVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILA 313
Query: 353 CAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS 410
+ G MD+ +L +M L ++ ++ + G K ++ AL +F++++ +G S
Sbjct: 314 SVKQGNMDDAIRLKDEM--LSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 411 SVPI-YNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQ-------------- 455
+ +++L+ + GE++KAL + KM L L + IQ
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 456 --------------CHV------ESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKI 495
C+ + G EA E +K+ P+V +YN + G C+
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ 491
Query: 496 GEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVI 555
+D A ++ + L P + Y++ I R+ + + +EV+N MT N V+
Sbjct: 492 KNMDLARIVFSNILEK-GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVV 550
Query: 556 CSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEHMKKKTAD 607
II+G+CK G +AR++ N+ E K L + + Y+ I+ K+ D
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLC-VSCMSYNSIIDGFFKEGEMD 601
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 144 KQKGYKHNFASYNAL--AYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKP 201
K KG K + +Y AL +C R+N+ A+ EL++ P
Sbjct: 646 KNKGVKLDIPAYGALIDGFC-KRSNMESASALFSELLEEG-----------------LNP 687
Query: 202 DVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELF 261
Y ++I N+ A L ++++M KD + D+ Y TLI GL K G ++ EL+
Sbjct: 688 SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELY 747
Query: 262 REMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRV 321
EM+ G++ D IY V++ GL +G+ K + +++ + ++ IYN++I G R
Sbjct: 748 TEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYRE 807
Query: 322 KQFDKAYKLFEVTVQDDLAPDFSTVNPLL 350
D+A++L + + + PD +T + L+
Sbjct: 808 GNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 16/223 (7%)
Query: 147 GYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAY 206
G N +Y +L L +NN R+ + LE+ ++M+ K D+ AY
Sbjct: 614 GISPNVITYTSLMNGLCKNN----------------RMDQALEMRDEMKNKGVKLDIPAY 657
Query: 207 TAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKE 266
A+I N+++ ++ E+ ++ + Y +LI G G +V +L+++M +
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717
Query: 267 NGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDK 326
+G+ D Y LI+GL+ +G + A +L ++ G D IY I+ GL + QF K
Sbjct: 718 DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVK 777
Query: 327 AYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQM 369
K+FE ++++ P+ N ++ G +D F+L +M
Sbjct: 778 VVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%)
Query: 201 PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHEL 260
PD YT ++ L+ + ++++EEMKK+ V +V+ Y +I G + G + L
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
Query: 261 FREMKENGILIDRAIYGVLIEGLVGEGKVGKACDL 295
EM + GIL D A + +L+ G VG + +A L
Sbjct: 817 HDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 178 MDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEAD 237
+ +G+ +++++ E+M++N P+V Y A+I E NLD R+ +EM + D
Sbjct: 769 LSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPD 828
Query: 238 VMAYVTLIMGLCKGGRVVRGHEL 260
+ L+ G + VR L
Sbjct: 829 GATFDILVSGQVGNLQPVRAASL 851
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 193/424 (45%), Gaps = 18/424 (4%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAY 241
GR+ E + ++M C+P YT +I+ L +D +++EM + +V Y
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
LI GLC+ G++ + + R+M ++ I Y LI G +G+V A +LL +
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDN 361
+ ++ +N ++ GLCRV + KA L + + + L+PD + N L+ G M+
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 362 FFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYSSVPIY-NIL 418
+KLL+ M F + D F + K+ + +A + KG S + L
Sbjct: 460 AYKLLSSMN--CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517
Query: 419 MGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQ 478
+ + ++G+ + AL++ + + + S ++ + + + E KI ++
Sbjct: 518 IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGL 577
Query: 479 VPSVAAYNCLTKGLCKIGEIDAA-----MMLVRDCLGNVASGPTEFKYALTILHVCRSGE 533
VPSV Y L GL + G+I + +M + CL NV + Y + I +C+ G
Sbjct: 578 VPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV------YPYTIIINGLCQFGR 631
Query: 534 AEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVY 593
E+ ++L+ M G PN V + ++ G +G L+ A + + ER E N +Y
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY--ELNDRIY 689
Query: 594 DEIL 597
+L
Sbjct: 690 SSLL 693
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 140/610 (22%), Positives = 246/610 (40%), Gaps = 93/610 (15%)
Query: 48 PHQSPPFNVQKWDPHYLPNQKTQSPPSDPKTFQLQRHLSPI-ARFITDAFRKNQFQWGPQ 106
P+ +++ H PN +Q LQR + I RF + + + + P
Sbjct: 52 PNWEKNSSLKSLVSHMNPNVASQ-------VISLQRSDNDICVRFFMWVCKHSSYCFDPT 104
Query: 107 VVTELSKL----------RRVTPDLVAEVLKVENNPTLASKFFHWAGKQKGYKHNFASYN 156
+L KL V L+ E + E F + G++ N+ Y+
Sbjct: 105 QKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYS 164
Query: 157 ALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKP--------------- 201
+L L++ +L A M++ G + M++ + LCK
Sbjct: 165 SLLMSLAKLDLGFLAYVTYRRMEADGFVVGMID-YRTIVNALCKNGYTEAAEMFMSKILK 223
Query: 202 -----DVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEA-DVMAYVTLIMGLCKGGRVV 255
D T+++ NL L+V++ M K++ A + ++Y LI GLC+ GR+
Sbjct: 224 IGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLE 283
Query: 256 RGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSII 315
L +M E G Y VLI+ L G + KA +L +++ G + ++ Y +I
Sbjct: 284 EAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLI 343
Query: 316 GGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFS 375
GLCR + ++A + V+D + P T N L+ + GR+ F+LL MEK +
Sbjct: 344 DGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR--A 401
Query: 376 VAADLEKFFEFL-----VGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVK 429
++ F E + VGK + A+ + + + G S + YN+L+ L G +
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYK---AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Query: 430 KALYLFGKMRGLNLEVNSLSFSIAIQCHVESG--DILEAC--ECHNKIIEMSQVPSVAAY 485
A L M ++E + L+F+ I + G D+ A K I + +V
Sbjct: 459 TAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT-- 516
Query: 486 NCLTKGLCKIGEIDAAM-----------------------MLVRDC-----------LGN 511
L G+CK+G+ A+ ML + C +
Sbjct: 517 --LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINK 574
Query: 512 VASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEE 571
+ P+ Y + + RSG+ +L M GC PN + II+G+C+ G +EE
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 572 ARKVFTNLRE 581
A K+ + +++
Sbjct: 635 AEKLLSAMQD 644
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/511 (20%), Positives = 207/511 (40%), Gaps = 75/511 (14%)
Query: 112 SKLRRVTPDLVAEVLKVE-NNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRA 170
S + + P++ ++V+ ++ ++ + +FF W K Y + N L + + L+R
Sbjct: 62 SLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRV 121
Query: 171 ADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMK 230
A V ++ ++++ R E+ + + ++E++
Sbjct: 122 AHAV------------IVALIKECSR------------------CEKEMLKLMYCFDELR 151
Query: 231 KDL-VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKV 289
+ + Y +L+M L K + +R M+ +G ++ Y ++ L G
Sbjct: 152 EVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYT 211
Query: 290 GKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQD-DLAPDFSTVNP 348
A + ++ G+ D I S++ G CR A K+F+V ++ AP+ + +
Sbjct: 212 EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSI 271
Query: 349 LLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKG 408
L+ E+GR++ F L QM + KG
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGE-----------------------------------KG 296
Query: 409 YS-SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEAC 467
S Y +L+ AL + G + KA LF +M + N ++++ I G I EA
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 468 ECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILH 527
K+++ PSV YN L G CK G + A L+ + A P + +
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL-TVMEKRACKPNVRTFNELMEG 415
Query: 528 VCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTE 587
+CR G+ K + +L M G P+ V + +I G+C+ G + A K+ +++ + E
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI--E 473
Query: 588 ANTIVYDEILIEHMKKKTADLVLSGLKFFGL 618
+ + + I+ K+ AD+ + F GL
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASA---FLGL 501
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%)
Query: 174 VPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDL 233
+ +++ ++ E L +L K+ + P V YT ++ L ++ R+ E MK
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG 611
Query: 234 VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKAC 293
+V Y +I GLC+ GRV +L M+++G+ + Y V+++G V GK+ +A
Sbjct: 612 CLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671
Query: 294 DLLKDLVDSGYRADLGIYNSIIGGL 318
+ ++ +V+ GY + IY+S++ G
Sbjct: 672 ETVRAMVERGYELNDRIYSSLLQGF 696
Score = 32.7 bits (73), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
+ L+ LCK GR ++L + + E G+ +++A+ +++E + K K +L+ ++
Sbjct: 743 IFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM-DIIMESYCSKKKHTKCMELITLVLK 801
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKL 330
SG+ + +I GL + ++A +L
Sbjct: 802 SGFVPSFKSFCLVIQGLKKEGDAERAREL 830
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 205/448 (45%), Gaps = 43/448 (9%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
+ +E + ++++M + C+P++ Y ++ L + D L + +M+ +EADV+
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
+ T+I LCK V LF+EM+ GI + Y LI L G+ A LL D++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD 360
+ +L +N++I + +F +A KL++ ++ + PD T N L+
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV---------- 372
Query: 361 NFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNILMG 420
N F + +++K K + FEF+V K D F + V YN L+
Sbjct: 373 NGFCMHDRLDKAK--------QMFEFMVSK--------DCFPD--------VVTYNTLIK 408
Query: 421 ALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVP 480
+ V+ LF +M L ++++++ IQ GD A + +++ P
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 481 SVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEV 540
+ Y+ L GLC G+++ A+ V D + + Y I +C++G+ + ++
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALE-VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 541 LNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEH 600
++ +G PN V + +ISG+C L+EA + ++E L + T Y+ ++ H
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT--YNTLIRAH 585
Query: 601 M----KKKTADLV--LSGLKFFGLESKL 622
+ K +A+L+ + +F G S +
Sbjct: 586 LRDGDKAASAELIREMRSCRFVGDASTI 613
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 168/387 (43%), Gaps = 16/387 (4%)
Query: 201 PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHEL 260
P + + ++ +A + D + + E+M++ + + Y LI C+ ++ L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 261 FREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCR 320
+M + G L+ G ++ A L+ +V+ GYR D + ++I GL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 321 VKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADL 380
+ +A L + VQ P+ T ++ + G D LL +ME K + AD+
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK--IEADV 260
Query: 381 EKFFEFL--VGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGK 437
F + + K + AL++F+E++ KG +V Y+ L+ L G A L
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 438 MRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGE 497
M + N ++F+ I V+ G +EA + ++ +I+ S P + YN L G C
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 498 IDAA-----MMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPN 552
+D A M+ +DC +V + Y I C+S E E+ EM+ G +
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVT------YNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 553 EVICSAIISGMCKHGTLEEARKVFTNL 579
V + +I G+ G + A+KVF +
Sbjct: 435 TVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 143/345 (41%), Gaps = 55/345 (15%)
Query: 144 KQKGYKHNFASYNALAYCLSRNNLFRAADQV----------PELMD---------SQGRI 184
+ KG + N +Y++L CL + A Q+ P L+ +G+
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 185 AEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTL 244
E ++ + M + PD+F Y +++ LD +++E M DV+ Y TL
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 245 IMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGY 304
I G CK RV G ELFREM G++ D Y LI+GL +G A + K +V G
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 305 RADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFK 364
D+ Y+ ++ GLC + +KA ++F+ + ++ D ++ + G++D+
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD--- 523
Query: 365 LLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALL 423
D+F L KG +V YN ++ L
Sbjct: 524 --------------------------------GWDLFCSLSLKGVKPNVVTYNTMISGLC 551
Query: 424 EIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACE 468
+++A L KM+ NS +++ I+ H+ GD + E
Sbjct: 552 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 404 LKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDI 463
+K + S+ +N L+ A+ ++ + + L KM+ L + +++I I C I
Sbjct: 77 VKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQI 136
Query: 464 LEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYAL 523
A K++++ PS+ + L G C I A+ LV D + + P +
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV-DQMVEMGYRPDTITFTT 195
Query: 524 TILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERK 583
I + +A + + +++ M Q GC PN V +++G+CK G + A + + K
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 584 LLTEANTIVYDEILIEHMKKKTADLVLSGLK 614
+ EA+ ++++ I+ K + D L+ K
Sbjct: 256 I--EADVVIFNTIIDSLCKYRHVDDALNLFK 284
Score = 40.0 bits (92), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 176 ELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVE 235
E M G++ + ++ + KP+V Y MI L ++R L + ++MK+D
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 236 ADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKA 292
+ Y TLI + G EL REM+ + D + G L+ ++ +G++ K+
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKS 628
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 190/402 (47%), Gaps = 7/402 (1%)
Query: 174 VPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDL 233
V +M G+ A +E+L KM K D Y+ +I L + +LD ++ EM+
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 234 VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKAC 293
+AD++ Y TLI G C GR G +L R+M + I + + VLI+ V EGK+ +A
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 294 DLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCC 353
LLK+++ G + YNS+I G C+ + ++A ++ ++ + PD T N L+
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 354 AEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS- 410
+ R+D+ +L +M L+ V A+ + + G + ++ +A +F+E+ +
Sbjct: 414 CKANRIDDGLELFREMS-LR-GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 411 SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECH 470
+ Y IL+ L + GE++KAL +FGK+ +E++ + I I + + +A +
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 471 NKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCR 530
+ AYN + LC+ + A +L R + P E Y + I
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK-MTEEGHAPDELTYNILIRAHLG 590
Query: 531 SGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEA 572
+A E++ EM G P + +I+ M G L+++
Sbjct: 591 DDDATTAAELIEEMKSSGFPADVSTVKMVIN-MLSSGELDKS 631
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 194/405 (47%), Gaps = 12/405 (2%)
Query: 183 RIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYV 242
R++E LE++++M KP + ++ L + + + + M + + + + Y
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 243 TLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDS 302
++ +CK G+ EL R+M+E I +D Y ++I+GL +G + A +L ++
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 303 GYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNF 362
G++AD+ YN++IGG C ++D KL ++ ++P+ T + L+ + G++
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 363 FKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNILM 419
+LL +M ++ +A + + + G KE R+ A+ + + + KG + +NIL+
Sbjct: 353 DQLLKEM--MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 420 GALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQV 479
+ + L LF +M + N+++++ +Q +SG + A + +++
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 480 PSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFK---YALTILHVCRSGEAEK 536
P + +Y L GLC GE++ A+ + G + E Y + I +C + + +
Sbjct: 471 PDIVSYKILLDGLCDNGELEKAL----EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 537 IIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRE 581
++ + +G + + +IS +C+ +L +A +F + E
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 178/387 (45%), Gaps = 6/387 (1%)
Query: 201 PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHEL 260
P V + + +A + + L + ++M+ + + +I C+ ++
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 261 FREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCR 320
++ + G D I+ L+ GL E +V +A +L+ +V+ G++ L N+++ GLC
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 321 VKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADL 380
+ A L + V+ P+ T P+L + G+ +LL +ME+ ++ D
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER--NIKLDA 263
Query: 381 EKFFEFLVG--KEERIMMALDVFEELKGKGY-SSVPIYNILMGALLEIGEVKKALYLFGK 437
K+ + G K+ + A ++F E++ KG+ + + YN L+G G L
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 438 MRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGE 497
M + N ++FS+ I V+ G + EA + ++++ P+ YN L G CK
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 498 IDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICS 557
++ A+ +V D + + P + + I C++ + +E+ EM+ G N V +
Sbjct: 384 LEEAIQMV-DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 558 AIISGMCKHGTLEEARKVFTNLRERKL 584
++ G C+ G LE A+K+F + R++
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 153/351 (43%), Gaps = 45/351 (12%)
Query: 99 NQFQW--GPQVVTELSKLRRVTPDLVAEVLKVENNPTLASKFFHWAGK------------ 144
N +W G +++ ++ K R+++P++V + +++ F GK
Sbjct: 310 NAGRWDDGAKLLRDMIK-RKISPNVVTFSVLIDS--------FVKEGKLREADQLLKEMM 360
Query: 145 QKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVF 204
Q+G N +YN+L + N A Q+ +LM S+G C PD+
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG----------------CDPDIM 404
Query: 205 AYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREM 264
+ +I +D L ++ EM V A+ + Y TL+ G C+ G++ +LF+EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 265 KENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQF 324
+ D Y +L++GL G++ KA ++ + S D+GIY II G+C +
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 325 DKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFF 384
D A+ LF + D N ++ +E+ R D+ K K+ A E +
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMI---SELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 385 EFLVGK---EERIMMALDVFEELKGKGYSSVPIYNILMGALLEIGEVKKAL 432
L+ ++ A ++ EE+K G+ + ++ +L GE+ K+
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSF 632
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 136/322 (42%), Gaps = 9/322 (2%)
Query: 279 LIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDD 338
L GLVG K A DL +D++ S + +N + + + KQ++ L +
Sbjct: 60 LSSGLVGI-KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG 118
Query: 339 LAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMM 396
+A T++ ++ C ++ F + ++ KL + D F L G E R+
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYE--PDTVIFNTLLNGLCLECRVSE 176
Query: 397 ALDVFEELKGKGYSSVPI-YNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQ 455
AL++ + + G+ I N L+ L G+V A+ L +M + N +++ +
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 456 CHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASG 515
+SG A E K+ E + Y+ + GLCK G +D A L + +
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE-MEIKGFK 295
Query: 516 PTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKV 575
Y I C +G + ++L +M + PN V S +I K G L EA ++
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 576 FTNLRERKLLTEANTIVYDEIL 597
+ +R + NTI Y+ ++
Sbjct: 356 LKEMMQRGI--APNTITYNSLI 375
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 210/481 (43%), Gaps = 45/481 (9%)
Query: 180 SQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDL-VEADV 238
S I+ E+ + M + +V + ++ E L+ L + E M + V D
Sbjct: 181 SSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDN 240
Query: 239 MAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKD 298
+ Y T++ + K GR+ EL +MK+NG++ +R Y L+ G G + +A +++
Sbjct: 241 VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 299 LVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGR 358
+ + DL YN +I GLC + +L + L PD T N L+ C E+G
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 359 MDNFFKLLAQMEKLKFSVAADLEKF-FEFLVGKEERIMMALDVFEELKGKGYS-SVPIYN 416
KL+ QME ++L +E+R + V E + G+S + Y+
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYH 420
Query: 417 ILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQC-------------------- 456
L+ A L++G++ AL + +M +++N+++ + +
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR 480
Query: 457 -----HVESGDIL----------EACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAA 501
V G ++ +A E +++ ++ P+V+ +N L GLC G+ + A
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 502 MMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIIS 561
M D L P + + IL C+ G EK E NE + P+ C+ +++
Sbjct: 541 MEKF-DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 562 GMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEIL---IEHMKKKTADLVLSGLKFFGL 618
G+CK G E+A F L E + E +T+ Y+ ++ + K K A +LS ++ GL
Sbjct: 600 GLCKEGMTEKALNFFNTLIEER---EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 619 E 619
E
Sbjct: 657 E 657
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 197/437 (45%), Gaps = 24/437 (5%)
Query: 144 KQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDV 203
K+ G N +YN L Y + G + E +I+E M++ PD+
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCK----------------LGSLKEAFQIVELMKQTNVLPDL 310
Query: 204 FAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFRE 263
Y +I L ++ L + + MK ++ DV+ Y TLI G + G + +L +
Sbjct: 311 CTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQ 370
Query: 264 MKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD-SGYRADLGIYNSIIGGLCRVK 322
M+ +G+ ++ + + ++ L E K +K+LVD G+ D+ Y+++I +V
Sbjct: 371 MENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVG 430
Query: 323 QFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEK 382
A ++ Q + + T+N +L + ++D LL K F V D
Sbjct: 431 DLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV--DEVT 488
Query: 383 FFEFLVG--KEERIMMALDVFEELKG-KGYSSVPIYNILMGALLEIGEVKKALYLFGKMR 439
+ ++G +EE++ AL++++E+K K +V +N L+G L G+ + A+ F ++
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 440 GLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEID 499
L + +F+ I + + G + +A E +N+ I+ S P N L GLCK G +
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 500 AAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAI 559
A+ + Y I C+ + ++ ++L+EM ++G P+ ++
Sbjct: 609 KALNFFNTLIEEREVDTV--TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666
Query: 560 ISGMCKHGTLEEARKVF 576
IS + + G L E ++
Sbjct: 667 ISLLMEDGKLSETDELL 683
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 202/447 (45%), Gaps = 15/447 (3%)
Query: 178 MDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEAD 237
M +GR++++ E+L M++N P+ Y ++ +L ++ E MK+ V D
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD 309
Query: 238 VMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLK 297
+ Y LI GLC G + G EL MK + D Y LI+G G +A L++
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369
Query: 298 DLVDSGYRADLGIYNSIIGGLCRVKQFDKAY-KLFEVTVQDDLAPDFSTVNPLLVCCAEM 356
+ + G +A+ +N + LC+ ++ + K+ E+ +PD T + L+ ++
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429
Query: 357 GRMDNFFKLLAQMEKLKFSV-AADLEKFFEFLVGKEERIMMALDVFEELKGKGY--SSVP 413
G + +++ +M + + L + L KE ++ A ++ +G+ V
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALC-KERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 414 IYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKI 473
++MG E +V+KAL ++ +M+ + + +F+ I G A E +++
Sbjct: 489 YGTLIMGFFRE-EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 474 IEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGE 533
E +P + +N + G CK G ++ A + + + + P + + + +C+ G
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH-SFKPDNYTCNILLNGLCKEGM 606
Query: 534 AEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVY 593
EK + N + +E + V + +IS CK L+EA + + + E+ L E + Y
Sbjct: 607 TEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL--EPDRFTY 663
Query: 594 D---EILIEHMKKKTADLVLSGLKFFG 617
+ +L+E K D +L KF G
Sbjct: 664 NSFISLLMEDGKLSETDELLK--KFSG 688
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 163/378 (43%), Gaps = 46/378 (12%)
Query: 221 ACLRVWEEMKKDLVEADVMAYVTLIMGLCK---GGRVVRGHELFREMKENGILIDRAIYG 277
L+++++M + ++ +++ TL++GL + + E+F +M + G+ ++ +
Sbjct: 149 VALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFN 208
Query: 278 VLIEGLVGEGKVGKACDLLKDLVDS-GYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQ 336
VL+ G EGK+ A +L+ +V D YN+I+ + + + +L +
Sbjct: 209 VLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKK 268
Query: 337 DDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMM 396
+ L P+ T N L+ ++G + F+++ M++ +V DL
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT--NVLPDL---------------- 310
Query: 397 ALDVFEELKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQC 456
YNIL+ L G +++ L L M+ L L+ + ++++ I
Sbjct: 311 ----------------CTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354
Query: 457 HVESGDILEACECHNKIIEMSQVPSVAA----YNCLTKGLCKIGEIDAAMMLVRDCLGNV 512
E G LEA K++E + V A +N K LCK + +A V++ +
Sbjct: 355 CFELGLSLEA----RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410
Query: 513 ASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEA 572
P Y I + G+ +E++ EM Q+G N + + I+ +CK L+EA
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 573 RKVFTNLRERKLLTEANT 590
+ + +R + + T
Sbjct: 471 HNLLNSAHKRGFIVDEVT 488
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 126/290 (43%), Gaps = 27/290 (9%)
Query: 145 QKGYKHNFASYNAL--AYCLSR-----NNLFRAADQVPELMDS------------QGRIA 185
QKG K N + N + A C R +NL +A + ++D + ++
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 186 EMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLI 245
+ LE+ ++M++ P V + ++I L + + ++E+ + + D + ++I
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 246 MGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYR 305
+G CK GRV + E + E ++ D +L+ GL EG KA + L++
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE-RE 622
Query: 306 ADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKL 365
D YN++I C+ K+ +AY L + L PD T N + E G++ +L
Sbjct: 623 VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL 682
Query: 366 LAQME----KLKFSVAADLEKFFEFLVGKEERIMMAL---DVFEELKGKG 408
L + +K + + EK KEE A+ DV +EL +G
Sbjct: 683 LKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRG 732
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 194/422 (45%), Gaps = 37/422 (8%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
+ +E + ++++M + C+P++ Y ++ L ++D + +M+ +EADV+
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
+ T+I LCK V LF+EM+ GI + Y LI L G+ A LL D++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD 360
+ +L +N++I + +F +A KL + ++ + PD T N L+
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI---------- 297
Query: 361 NFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNILMG 420
N F + +++K K + FEF+V K D F +L YN L+
Sbjct: 298 NGFCMHDRLDKAK--------QMFEFMVSK--------DCFPDL--------DTYNTLIK 333
Query: 421 ALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVP 480
+ V+ LF +M L ++++++ IQ GD A + +++ P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 481 SVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEV 540
+ Y+ L GLC G+++ A+ V D + + Y I +C++G+ + ++
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALE-VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 541 LNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEH 600
++ +G PN V + +ISG+C L+EA + ++E L ++ T Y+ ++ H
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT--YNTLIRAH 510
Query: 601 MK 602
++
Sbjct: 511 LR 512
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 170/387 (43%), Gaps = 16/387 (4%)
Query: 201 PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHEL 260
P +F + ++ +A + D + + E+M++ + ++ Y LI C+ ++ L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 261 FREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCR 320
+M + G L+ G ++ A L+ +V+ GYR D + ++I GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 321 VKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADL 380
+ +A L + VQ P+ T ++ + G +D F LL +ME K + AD+
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK--IEADV 185
Query: 381 EKFFEFL--VGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGK 437
F + + K + AL++F+E++ KG +V Y+ L+ L G A L
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 438 MRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGE 497
M + N ++F+ I V+ G +EA + H+ +I+ S P + YN L G C
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 498 IDAA-----MMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPN 552
+D A M+ +DC P Y I C+S E E+ EM+ G +
Sbjct: 306 LDKAKQMFEFMVSKDCF------PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 553 EVICSAIISGMCKHGTLEEARKVFTNL 579
V + +I G+ G + A+KVF +
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 164/367 (44%), Gaps = 6/367 (1%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
+G I +L KM + DV + +I L R++D L +++EM+ + +V+
Sbjct: 163 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 222
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y +LI LC GR +L +M E I + + LI+ V EGK +A L D++
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD 360
D+ YNS+I G C + DKA ++FE V D PD T N L+ + R++
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 361 NFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGY-SSVPIYNI 417
+ +L +M + D + + G + A VF+++ G + Y+I
Sbjct: 343 DGTELFREMSHR--GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 418 LMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMS 477
L+ L G+++KAL +F M+ ++++ ++ I+ ++G + + + +
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Query: 478 QVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKI 537
P+V YN + GLC + A L++ + P Y I R G+
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKK-MKEDGPLPDSGTYNTLIRAHLRDGDKAAS 519
Query: 538 IEVLNEM 544
E++ EM
Sbjct: 520 AELIREM 526
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 140/339 (41%), Gaps = 55/339 (16%)
Query: 144 KQKGYKHNFASYNALAYCLSRNNLFRAADQV----------PELMD---------SQGRI 184
+ KG + N +Y++L CL + A Q+ P L+ +G+
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 185 AEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTL 244
E ++ + M + PD+F Y ++I LD +++E M D+ Y TL
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 245 IMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGY 304
I G CK RV G ELFREM G++ D Y LI+GL +G A + K +V G
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 305 RADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFK 364
D+ Y+ ++ GLC + +KA ++F+ + ++ D ++ + G++D+
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD--- 448
Query: 365 LLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALL 423
D+F L KG +V YN ++ L
Sbjct: 449 --------------------------------GWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Query: 424 EIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGD 462
+++A L KM+ +S +++ I+ H+ GD
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%)
Query: 183 RIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYV 242
R+ + E+ +M D YT +I+ L + + D +V+++M D V D+M Y
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 399
Query: 243 TLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDS 302
L+ GLC G++ + E+F M+++ I +D IY +IEG+ GKV DL L
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 303 GYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNF 362
G + ++ YN++I GLC + +AY L + +D PD T N L+ G
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 519
Query: 363 FKLLAQMEKLKF 374
+L+ +M +F
Sbjct: 520 AELIREMRSCRF 531
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 98/211 (46%), Gaps = 3/211 (1%)
Query: 404 LKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDI 463
+K + S+ +N L+ A+ ++ + + L KM+ L + N +++I I C I
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 464 LEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYAL 523
A K++++ PS+ + L G C I A+ LV D + + P +
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV-DQMVEMGYRPDTITFTT 120
Query: 524 TILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERK 583
I + +A + + +++ M Q GC PN V +++G+CK G ++ A + + K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 584 LLTEANTIVYDEILIEHMKKKTADLVLSGLK 614
+ EA+ ++++ I+ K + D L+ K
Sbjct: 181 I--EADVVIFNTIIDSLCKYRHVDDALNLFK 209
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 176 ELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVE 235
E M G++ + ++ + KP+V Y MI L ++R L + ++MK+D
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 236 ADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKA 292
D Y TLI + G EL REM+ + D + G L+ ++ +G++ K+
Sbjct: 498 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKS 553
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 184/422 (43%), Gaps = 44/422 (10%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
R + + +L++M+ PD+F Y ++I L+ + +D EM ++ ++ +
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y I G + + +EM+E G+L ++ + LI +GKV +AC + +V
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD 360
D G D Y ++ GL + + D A ++F +APD + L+
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI---------- 634
Query: 361 NFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILM 419
N F L M+K A +F+E+ +G + +V IYN+L+
Sbjct: 635 NGFSKLGNMQK-------------------------ASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 420 GALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQV 479
G GE++KA L +M L N++++ I + +SGD+ EA +++ V
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 480 PSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIE 539
P Y L G C++ +++ A+ + AS F + V + G+ E E
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN--WVFKFGKTELKTE 787
Query: 540 VLNEMTQEGC----PPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDE 595
VLN + PN+V + +I +CK G LE A+++F ++ L+ I Y
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM--PTVITYTS 845
Query: 596 IL 597
+L
Sbjct: 846 LL 847
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 184/409 (44%), Gaps = 37/409 (9%)
Query: 204 FAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFRE 263
+ Y I V++ E ++ +++ M + AY +LI G C+ V +G+EL E
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 264 MKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQ 323
MK+ I+I YG +++G+ G + A +++K+++ SG R ++ IY ++I + +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 324 FDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQM--EKLK---FSVAA 378
F A ++ + + +APD N L++ ++ RMD L +M LK F+ A
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 379 DLEKFFE------------------------FLVG------KEERIMMALDVFEELKGKG 408
+ + E G K+ +++ A + + +G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 409 -YSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEAC 467
Y +LM L + +V A +F +MRG + + S+ + I + G++ +A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 468 ECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILH 527
++++E P+V YN L G C+ GEI+ A L+ D + P Y I
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL-DEMSVKGLHPNAVTYCTIIDG 706
Query: 528 VCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVF 576
C+SG+ + + +EM +G P+ + + ++ G C+ +E A +F
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 127/533 (23%), Positives = 223/533 (41%), Gaps = 76/533 (14%)
Query: 147 GYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQG-------------------RIAEM 187
G + N Y L +N+ F A +V + M QG R+ E
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 188 LEILEKMRRNLCKPDVFAYTAMIR--VLAAE----------------------------- 216
L +M N KP+ F Y A I + A+E
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 217 -----RNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILI 271
+ ++AC + M + D Y L+ GL K +V E+FREM+ GI
Sbjct: 567 YCKKGKVIEAC-SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 272 DRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLF 331
D YGVLI G G + KA + ++V+ G ++ IYN ++GG CR + +KA +L
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 332 EVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG-- 389
+ L P+ T ++ + G + F+L +M KLK + D + + G
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLK-GLVPDSFVYTTLVDGCC 743
Query: 390 KEERIMMALDVFEELKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEV---- 445
+ + A+ +F K SS +N L+ + + G+ + + ++ + +
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 446 NSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLV 505
N ++++I I + G++ A E +++ + +P+V Y L G K+G A M V
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR-RAEMFPV 862
Query: 506 RDCLGNVASG--PTEFKYALTILHVCRSGEAEKIIEVLNEM-----TQEGCPPNEVICSA 558
D +A+G P Y++ I + G K + ++++M +GC + C A
Sbjct: 863 FD--EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920
Query: 559 IISGMCKHGTLEEARKVFTNLRERKLLTEANTIV--YDEILIEHMKKKTADLV 609
++SG K G +E A KV N+ + + ++ T++ +E I ++ AD V
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 190/470 (40%), Gaps = 52/470 (11%)
Query: 198 LCK---PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRV 254
+CK P + Y +I L + L+ + EM V D Y LI GL KG
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328
Query: 255 VRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSI 314
L EM +GI I +Y I + EG + KA L ++ SG Y S+
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388
Query: 315 IGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQM--EKL 372
I G CR K + Y+L + ++ T ++ G +D + ++ +M
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 373 KFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKA 431
+ +V FL + R A+ V +E+K +G + + YN L+ L + + +A
Sbjct: 449 RPNVVIYTTLIKTFL--QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 432 LYLFGKMRGLNLEVNSLSFSIAIQCHVES------------------------------- 460
+M L+ N+ ++ I ++E+
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 461 ----GDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGP 516
G ++EAC + +++ + Y L GL K ++D A + R+ G P
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK-GIAP 625
Query: 517 TEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVF 576
F Y + I + G +K + +EM +EG PN +I + ++ G C+ G +E+A+++
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 577 TNLRERKLLTEANTIVYDEILIEHMKKKTADLVLSGLKFFGLESKLKAKG 626
+ + L N + Y I+ + K+ DL + F L ++K KG
Sbjct: 686 DEMSVKGL--HPNAVTYCTIIDGYC--KSGDLA----EAFRLFDEMKLKG 727
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 124/587 (21%), Positives = 234/587 (39%), Gaps = 83/587 (14%)
Query: 78 TFQLQRHLSPIARFITDAFRK-----NQFQWGPQVVTELSKLRRVTPDLVAEVLKVE--N 130
F L R S ++DA + Q W +V+ + + P++V VL+ + +
Sbjct: 17 NFLLFRSFSVNVEKLSDASAEIAGILKQENWRDTLVSSNLSIE-INPEVVLSVLRSKRVD 75
Query: 131 NPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPE-LMDSQGRIAEMLE 189
+P+ FF+W QK + S++ LA L F A V E +++ +AE+
Sbjct: 76 DPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWS 135
Query: 190 ILEK----------------------MRRNLCKPDVFAYTAMI------RVLAAERNLDA 221
+ + + + + VF +++ + R+ + LDA
Sbjct: 136 SIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDA 195
Query: 222 CLR---------VWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHE-LFREMKE----- 266
LR V++ M + V DV Y LI+ C+ G V G + LF+ KE
Sbjct: 196 LLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTAT 255
Query: 267 ---------------NGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIY 311
G++ + Y VLI+GL ++ A LL ++ G D Y
Sbjct: 256 LNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315
Query: 312 NSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLV-CC----AEMGRMDNFFKLL 366
+ +I GL + + D A L V + + P + CC ++ G M+ L
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGI-----NIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 367 AQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYSSVP-IYNILMGALL 423
M + + + + + G +E+ + ++ E+K + P Y ++ +
Sbjct: 371 DGM--IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 424 EIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVA 483
G++ A + +M N + ++ I+ +++ +A ++ E P +
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 484 AYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNE 543
YN L GL K +D A + + + N P F Y I + E + + E
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVEN-GLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 544 MTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
M + G PN+V+C+ +I+ CK G + EA + ++ ++ +L +A T
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 192/405 (47%), Gaps = 18/405 (4%)
Query: 145 QKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVF 204
+ G + + +YN++ N + R+ D + L++L KM K DVF
Sbjct: 186 ENGCQPDVVTYNSIV-----NGICRSGDT-----------SLALDLLRKMEERNVKADVF 229
Query: 205 AYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREM 264
Y+ +I L + +DA + +++EM+ +++ V+ Y +L+ GLCK G+ G L ++M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 265 KENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQF 324
I+ + + VL++ V EGK+ +A +L K+++ G ++ YN+++ G C +
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 325 DKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFF 384
+A + ++ V++ +PD T L+ + R+D+ K+ + K A
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 385 EFLVGKEERIMMALDVFEELKGKG-YSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNL 443
+ +I +A ++F+E+ G V Y IL+ L + G+++KAL +F ++ +
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 444 EVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMM 503
++ + ++ I+ + G + +A + P+V Y + GLCK G + A +
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 504 LVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEG 548
L+R + + P + Y I R G+ +++ EM G
Sbjct: 530 LLRK-MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 189/406 (46%), Gaps = 8/406 (1%)
Query: 200 KPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHE 259
+PD + +I+ L E + + + + M ++ + DV+ Y +++ G+C+ G +
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 260 LFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLC 319
L R+M+E + D Y +I+ L +G + A L K++ G ++ + YNS++ GLC
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 320 RVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAAD 379
+ +++ L + V ++ P+ T N LL + G++ +L +M + ++ +
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM--ITRGISPN 332
Query: 380 LEKFFEFLVG--KEERIMMALDVFEEL-KGKGYSSVPIYNILMGALLEIGEVKKALYLFG 436
+ + + G + R+ A ++ + + + K + + L+ + V + +F
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 437 KMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIG 496
+ L N++++SI +Q +SG I A E +++ +P V Y L GLC G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 497 EIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVIC 556
+++ A+ + D L Y I +C+ G+ E + + +G PN +
Sbjct: 453 KLEKALEIFED-LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 557 SAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEHMK 602
+ +ISG+CK G+L EA + + E N Y+ ++ H++
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDG--NAPNDCTYNTLIRAHLR 555
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 203/436 (46%), Gaps = 12/436 (2%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
+G+++E + ++++M N C+PDV Y +++ + + L + +M++ V+ADV
Sbjct: 171 EGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFT 230
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y T+I LC+ G + LF+EM+ GI Y L+ GL GK LLKD+V
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD 360
++ +N ++ + + +A +L++ + ++P+ T N L+ R+
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 361 NFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKG-YSSVPIYNI 417
+L M + K S D+ F + G +R+ + VF + +G ++ Y+I
Sbjct: 351 EANNMLDLMVRNKCS--PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 418 LMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMS 477
L+ + G++K A LF +M + + +++ I + ++G + +A E + +
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 478 QVPSVAAYNCLTKGLCKIGEIDAAMMLVRD--CLGNVASGPTEFKYALTILHVCRSGEAE 535
+ Y + +G+CK G+++ A L C G P Y + I +C+ G
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG---VKPNVMTYTVMISGLCKKGSLS 525
Query: 536 KIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTI--VY 593
+ +L +M ++G PN+ + +I + G L + K+ ++ +A++I V
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Query: 594 DEILIEHMKKKTADLV 609
D +L + K D++
Sbjct: 586 DMLLSGELDKSFLDML 601
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 196/422 (46%), Gaps = 11/422 (2%)
Query: 186 EMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLI 245
+ + + ++M R+ P + ++ +A + + L ++++ + + ++ +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 246 MGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYR 305
C+ + + + ++ + G D + LI+GL EGKV +A L+ +V++G +
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 306 ADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKL 365
D+ YNSI+ G+CR A L + ++ D T + ++ G +D L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 366 LAQMEK--LKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNILMGALL 423
+ME +K SV L + AL + + + + +V +N+L+ +
Sbjct: 251 FKEMETKGIKSSVVT-YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 424 EIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVA 483
+ G++++A L+ +M + N ++++ + + + EA + ++ P +
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 484 AYNCLTKGLCKIGEIDAAMMLVRDC--LGNVASGPTEFKYALTILHVCRSGEAEKIIEVL 541
+ L KG C + +D M + R+ G VA+ T Y++ + C+SG+ + E+
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT---YSILVQGFCQSGKIKLAEELF 426
Query: 542 NEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEHM 601
EM G P+ + ++ G+C +G LE+A ++F +L++ K+ + ++Y I IE M
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM--DLGIVMYTTI-IEGM 483
Query: 602 KK 603
K
Sbjct: 484 CK 485
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 142/354 (40%), Gaps = 25/354 (7%)
Query: 229 MKKDLVEADVMAYVTLIMGLCKG--GRVVRGHELFREMKENGILIDRAIYGVLIEGLVGE 286
+K + D++ ++ C+ + G+ FRE +GI+ +
Sbjct: 22 LKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLRSGIV---------------D 66
Query: 287 GKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTV 346
K A L ++++ S L ++ + R KQF+ + + +A + T+
Sbjct: 67 IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 347 NPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEEL 404
N ++ C + + +L ++ KL + D F + G E ++ A+ + + +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYE--PDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 405 KGKGYS-SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDI 463
G V YN ++ + G+ AL L KM N++ + ++S I G I
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 464 LEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGN-VASGPTEFKYA 522
A ++ SV YN L +GLCK G+ + +L++D + + F
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 523 LTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVF 576
L + + G+ ++ E+ EM G PN + + ++ G C L EA +
Sbjct: 305 LDVF--VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 215/496 (43%), Gaps = 43/496 (8%)
Query: 111 LSKLRRVT--PDLVAEVL-KVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNL 167
L KL +T P V VL +++ +P LA KFF W+ + G+KH+ SY +A+ L +
Sbjct: 98 LEKLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARM 157
Query: 168 FRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWE 227
+ A+ V + M ++ ++L RN+C P + A+ VL L+ ++ +
Sbjct: 158 YYDANSVLKEMVLSKADCDVFDVLWS-TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFS 216
Query: 228 EMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEG 287
+MK+ V + L+ K G+ F++M G Y ++I+ + EG
Sbjct: 217 KMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEG 276
Query: 288 KVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVN 347
V A L +++ G D YNS+I G +V + D FE PD T N
Sbjct: 277 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 336
Query: 348 PLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGK 407
L+ C + G++ + L+ + E+KG
Sbjct: 337 ALINCFCKFGKLP-----------------------------------IGLEFYREMKGN 361
Query: 408 GYS-SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEA 466
G +V Y+ L+ A + G +++A+ + MR + L N +++ I + + G++ +A
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 467 CECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTIL 526
N+++++ +V Y L GLC + A L + P Y I
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGK-MDTAGVIPNLASYNALIH 480
Query: 527 HVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLT 586
++ ++ +E+LNE+ G P+ ++ I G+C +E A+ V ++E +
Sbjct: 481 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI-- 538
Query: 587 EANTIVYDEILIEHMK 602
+AN+++Y ++ + K
Sbjct: 539 KANSLIYTTLMDAYFK 554
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 201/446 (45%), Gaps = 40/446 (8%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAY 241
GR+ + + E+M+ C+PDV Y A+I L L + EMK + ++ +V++Y
Sbjct: 311 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 370
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
TL+ CK G + + + + +M+ G++ + Y LI+ G + A L +++
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDN 361
G ++ Y ++I GLC ++ +A +LF + P+ ++ N L+ + MD
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 362 FFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGY-SSVPIYNIL 418
+LL +++ + DL + F+ G E+I A V E+K G ++ IY L
Sbjct: 491 ALELLNELKGR--GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 419 MGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKII-EMS 477
M A + G + L+L +M+ L++EV ++F + I ++ + +A + N+I +
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 478 QVPSVAAYNCLTKGLCKIGEIDAAMML--------------------------------- 504
+ A + + GLCK +++AA L
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
Query: 505 -VRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGM 563
+RD + + Y + + + +K L EM EG P+EV+C +++
Sbjct: 669 ALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKH 728
Query: 564 CKHGTLEEARKVFTNLRERKLLTEAN 589
+ G ++EA ++ + L + +LLT N
Sbjct: 729 YELGCIDEAVELQSYLMKHQLLTSDN 754
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 175/400 (43%), Gaps = 5/400 (1%)
Query: 176 ELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVE 235
+ M +G + + E+M+ PD Y +MI LD + +EEMK E
Sbjct: 270 DCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE 329
Query: 236 ADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDL 295
DV+ Y LI CK G++ G E +REMK NG+ + Y L++ EG + +A
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 296 LKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAE 355
D+ G + Y S+I C++ A++L +Q + + T L+ +
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 356 MGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SV 412
RM +L +M+ V +L + + G K + + AL++ ELKG+G +
Sbjct: 450 AERMKEAEELFGKMDTA--GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 413 PIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNK 472
+Y + L + +++ A + +M+ ++ NSL ++ + + +SG+ E ++
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 473 IIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSG 532
+ E+ +V + L GLCK + A+ + + I +C+
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 533 EAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEA 572
+ E + +M Q+G P+ ++++ G K G + EA
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 4/199 (2%)
Query: 177 LMDS---QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDL 233
LMD+ G E L +L++M+ + V + +I L + + + + + D
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 234 -VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKA 292
++A+ + +I GLCK +V LF +M + G++ DR Y L++G +G V +A
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 293 CDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVC 352
L + + G + DL Y S++ GL Q KA E + + + PD +L
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
Query: 353 CAEMGRMDNFFKLLAQMEK 371
E+G +D +L + + K
Sbjct: 728 HYELGCIDEAVELQSYLMK 746
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 215/467 (46%), Gaps = 27/467 (5%)
Query: 135 ASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKM 194
A F W K+ G+K + SY+ + N+L +A G++ + LE+ ++M
Sbjct: 168 ARGFLDWMWKE-GFKPDVFSYSTVI-----NDLAKA-----------GKLDDALELFDEM 210
Query: 195 RRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDL-VEADVMAYVTLIMGLCKGGR 253
PDV Y +I E++ + +W+ + +D V +V + +I GL K GR
Sbjct: 211 SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGR 270
Query: 254 VVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNS 313
V +++ MK+N D Y LI GL G V KA + +L + D+ YN+
Sbjct: 271 VDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNT 330
Query: 314 IIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLK 373
++GG CR + ++ +L+ + + + + + N L+ E G++D + M
Sbjct: 331 MLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Query: 374 FSVAADLEKFFEFLVG--KEERIMMALDVFEELKGK-GYSSVPIYNILMGALLEIGEVKK 430
+ AAD + F+ G + AL V +E++ G+ V Y ++ L + +++
Sbjct: 390 Y--AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 431 ALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTK 490
A L +M +E+NS + I + + EA ++ + P+V +YN L
Sbjct: 448 ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILIC 507
Query: 491 GLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCP 550
GLCK G+ A V++ L N P Y++ + +CR + + +E+ ++ Q G
Sbjct: 508 GLCKAGKFGEASAFVKEMLEN-GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLE 566
Query: 551 PNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEIL 597
+ ++ + +I G+C G L++A V N+ R AN + Y+ ++
Sbjct: 567 TDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN--CTANLVTYNTLM 611
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 133/571 (23%), Positives = 240/571 (42%), Gaps = 70/571 (12%)
Query: 115 RRVTPDLVAEVLKVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQV 174
+ ++P V ++LK E NP A F A + GY H+ Y+ + LS + ++
Sbjct: 6 KSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRI 65
Query: 175 PELMDSQ----------------GRIA---EMLEILEKMRRNL-CKPDV----------- 203
EL+ SQ G+ + + L++ ++MR C+P +
Sbjct: 66 VELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125
Query: 204 -----------FAY-------------TAMIRVLAAERNLDACLRVWEEMKKDLVEADVM 239
FAY +I++ ++ + + M K+ + DV
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 240 AYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDL 299
+Y T+I L K G++ ELF EM E G+ D Y +LI+G + E A +L L
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 300 V-DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGR 358
+ DS ++ +N +I GL + + D K++E Q++ D T + L+ + G
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 359 MDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYSSVPIYN 416
+D + ++++ K S+ D+ + L G + +I +L+++ ++ K ++ YN
Sbjct: 306 VDKAESVFNELDERKASI--DVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYN 363
Query: 417 ILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEM 476
IL+ LLE G++ +A ++ M + ++ I I +G + +A ++
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 477 SQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALT--ILHVCRSGEA 534
V AY + LCK ++ A LV++ + + AL ++ R GEA
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 535 EKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYD 594
L EM + GC P V + +I G+CK G EA + E + T Y
Sbjct: 484 SFF---LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT--YS 538
Query: 595 EILIEHMKKKTADLVLSGLKFF---GLESKL 622
+L + + DL L F GLE+ +
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDV 569
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 188/417 (45%), Gaps = 17/417 (4%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAY 241
GR+ + L+I E+M++N + D++ Y+++I L N+D V+ E+ + DV+ Y
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTY 328
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
T++ G C+ G++ EL+R M E+ ++ Y +LI+GL+ GK+ +A + + +
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPA 387
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDN 361
GY AD Y I GLC +KA + + D ++ C + R++
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 362 FFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMG 420
L+ +M K + + + + ++ R+ A E+ G +V YNIL+
Sbjct: 448 ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILIC 507
Query: 421 ALLEIGEVKKALYLFGKM--RGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQ 478
L + G+ +A +M G ++ + S + C D+ A E ++ ++
Sbjct: 508 GLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL--ALELWHQFLQSGL 565
Query: 479 VPSVAAYNCLTKGLCKIGEIDAAMMLV-----RDCLGNVASGPTEFKYALTILHVCRSGE 533
V +N L GLC +G++D AM ++ R+C N+ + Y + + G+
Sbjct: 566 ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT------YNTLMEGFFKVGD 619
Query: 534 AEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
+ + + M + G P+ + + I+ G+C + A + F + R + T
Sbjct: 620 SNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYT 676
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAY 241
G+ E +++M N KPD+ Y+ ++ L +R +D L +W + + +E DVM +
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
LI GLC G++ + M+ + Y L+EG G +A + +
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLL 350
G + D+ YN+I+ GLC + A + F+ + P T N L+
Sbjct: 633 MGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 127/300 (42%), Gaps = 24/300 (8%)
Query: 146 KGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQG-------------------RIAE 186
KGY + +Y + L N A V + ++S G R+ E
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 187 MLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIM 246
++++M ++ + + A+I L + L EM K+ V++Y LI
Sbjct: 448 ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILIC 507
Query: 247 GLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRA 306
GLCK G+ +EM ENG D Y +L+ GL + K+ A +L + SG
Sbjct: 508 GLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLET 567
Query: 307 DLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLL 366
D+ ++N +I GLC V + D A + + + T N L+ ++G + +
Sbjct: 568 DVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Query: 367 AQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKG-YSSVPIYNILMGALL 423
M K+ + D+ + + G + A++ F++ + G + +V +NIL+ A++
Sbjct: 628 GYMYKM--GLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 217/511 (42%), Gaps = 96/511 (18%)
Query: 145 QKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVF 204
++G+ N ++N L L RN + + +L +MRRN PDVF
Sbjct: 135 KRGFAFNVYNHNILLKGLCRN----------------LECGKAVSLLREMRRNSLMPDVF 178
Query: 205 AYTAMIRVLAAERNLDACLRVWEEMK-------------------------------KDL 233
+Y +IR + L+ L + EMK K++
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 234 ----VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKV 289
+EAD++ Y +LI G C G + RG LF E+ E G Y LI G G++
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298
Query: 290 GKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPL 349
+A ++ + +++ G R ++ Y +I GLC V + +A +L + ++ D P+ T N +
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 350 L--VC----------------------------------CAEMGRMDNFFKLLAQMEKLK 373
+ +C CA+ G +D KLL M K
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK-GDLDEASKLLYLMLKDS 417
Query: 374 FSVAADLEKFFEFLVG--KEERIMMALDVFEELKGK-GYSSVPIYNILMGALLEIGEVKK 430
D+ + + G KE R+ ALD+++ L K G NIL+ + L+ G+V K
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Query: 431 ALYLFGKMRGLNLEVNSLSFSIAIQCHVESG--DILEACECHNKIIEMSQVPSVAAYNCL 488
A+ L+ ++ + NS +++ I ++G ++ + C ++ E+ PSV YNCL
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ--PSVFDYNCL 535
Query: 489 TKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEG 548
LCK G +D A L + + + P + + I ++G+ + +L M++ G
Sbjct: 536 LSSLCKEGSLDQAWRLFEE-MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 549 CPPNEVICSAIISGMCKHGTLEEARKVFTNL 579
P+ S +I+ K G L+EA F +
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 195/445 (43%), Gaps = 41/445 (9%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAY 241
G++ E + L++M+ + D+ YT++IR LD +++E+ + + Y
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
TLI G CK G++ E+F M E G+ + Y LI+GL G GK +A LL +++
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDN 361
+ YN II LC+ A ++ E+ + PD T N LL G +D
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 362 FFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGK-GYSSVPIYNIL 418
KLL M K D+ + + G KE R+ ALD+++ L K G NIL
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465
Query: 419 MGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESG--DILEACECHNKIIEM 476
+ + L+ G+V KA+ L+ ++ + NS +++ I ++G ++ + C ++ E+
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525
Query: 477 SQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDC---------------------LGNVASG 515
PSV YNCL LCK G +D A L + G++ S
Sbjct: 526 Q--PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 516 -------------PTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISG 562
P F Y+ I + G ++ I ++M G P+ IC +++
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643
Query: 563 MCKHGTLEEARKVFTNLRERKLLTE 587
G ++ ++ L ++ ++ +
Sbjct: 644 CISQGETDKLTELVKKLVDKDIVLD 668
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 159/347 (45%), Gaps = 43/347 (12%)
Query: 256 RGHEL----FREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIY 311
R HEL +R+M E I+ L+E V K G A +L ++ G+ ++ +
Sbjct: 86 RNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNH 145
Query: 312 NSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEK 371
N ++ GLCR + KA L ++ L PD + N ++
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVI--------------------- 184
Query: 372 LKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKK 430
F +LEK AL++ E+KG G S S+ + IL+ A + G++ +
Sbjct: 185 RGFCEGKELEK--------------ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230
Query: 431 ALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTK 490
A+ +M+ + LE + + ++ I+ + G++ ++++E P YN L +
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 491 GLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCP 550
G CK+G++ A + + + P + Y I +C G+ ++ +++LN M ++
Sbjct: 291 GFCKLGQLKEASEIF-EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 551 PNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEIL 597
PN V + II+ +CK G + +A ++ +++R+ T + I Y+ +L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRR--TRPDNITYNILL 394
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 154/326 (47%), Gaps = 12/326 (3%)
Query: 264 MKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQ 323
M + G + + +L++GL + GKA LL+++ + D+ YN++I G C K+
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 324 FDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKF 383
+KA +L + T L+ + G+MD L +M+ + + ADL +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFM--GLEADLVVY 250
Query: 384 FEFLVGKEE--RIMMALDVFEELKGKGYSSVPI-YNILMGALLEIGEVKKALYLFGKM-- 438
+ G + + +F+E+ +G S I YN L+ ++G++K+A +F M
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 439 RGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEI 498
RG+ V + + I C V G EA + N +IE + P+ YN + LCK G +
Sbjct: 311 RGVRPNVYTYTGLIDGLCGV--GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368
Query: 499 DAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEG--CPPNEVIC 556
A+ +V + + + P Y + + +C G+ ++ ++L M ++ P+ +
Sbjct: 369 ADAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 557 SAIISGMCKHGTLEEARKVFTNLRER 582
+A+I G+CK L +A ++ L E+
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEK 453
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 118/287 (41%), Gaps = 25/287 (8%)
Query: 108 VTELSKLRRVTPD-----LVAEVLKVENNPTLASKFFHWAGKQKGYKH-NFASYNALAYC 161
+ EL K RR PD ++ L + + ASK + K Y + SYNAL +
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 162 LSRNNLFRAADQVPELMDSQ-------------------GRIAEMLEILEKMRRNLCKPD 202
L + N A + +L+ + G + + +E+ +++ + +
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493
Query: 203 VFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFR 262
YTAMI L+ + +M+ ++ V Y L+ LCK G + + LF
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFE 553
Query: 263 EMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVK 322
EM+ + D + ++I+G + G + A LL + +G DL Y+ +I ++
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLG 613
Query: 323 QFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQM 369
D+A F+ V PD + +L C G D +L+ ++
Sbjct: 614 YLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 162 LSRNNLFRAADQVPELMDS---QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERN 218
+S + + R +D ++D G + +L KMR + +P VF Y ++ L E +
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 219 LDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGV 278
LD R++EEM++D DV+++ +I G K G + L M G+ D Y
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604
Query: 279 LIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDD 338
LI + G + +A +VDSG+ D I +S++ + DK +L + V D
Sbjct: 605 LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKD 664
Query: 339 LAPD 342
+ D
Sbjct: 665 IVLD 668
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 191/409 (46%), Gaps = 8/409 (1%)
Query: 200 KPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHE 259
+ D++ + +I + L + +M K E D + +L+ G C+ RV
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 260 LFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLC 319
L +M E G D Y +I+ L +V A D K++ G R ++ Y +++ GLC
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 320 RVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAAD 379
++ A +L ++ + P+ T + LL + G++ +L +M ++ S+ D
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM--VRMSIDPD 294
Query: 380 LEKFFEFLVGK--EERIMMALDVFEELKGKG-YSSVPIYNILMGALLEIGEVKKALYLFG 436
+ + + G +RI A +F+ + KG + V YN L+ + V+ + LF
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 437 KMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIG 496
+M L N+++++ IQ ++GD+ +A E +++ P + YN L GLC G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 497 EIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVIC 556
E++ A+++ D + Y I +C++G+ E+ + ++ +G P+ V
Sbjct: 415 ELEKALVIFED-MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 557 SAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILI--EHMKK 603
+ ++SG+C G L E ++T +++ L+ T+ +I + E +KK
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKK 522
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 162/322 (50%), Gaps = 11/322 (3%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMA 240
+ R+++ + +++KM KPD+ AY A+I L + ++ ++E+++ + +V+
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y L+ GLC R L +M + I + Y L++ V GKV +A +L +++V
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD 360
D+ Y+S+I GLC + D+A ++F++ V D + N L+ + R++
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 361 NFFKLLAQMEK---LKFSVAAD--LEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPI 414
+ KL +M + + +V + ++ FF+ G ++ A + F ++ G S +
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQ--AGDVDK---AQEFFSQMDFFGISPDIWT 402
Query: 415 YNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKII 474
YNIL+G L + GE++KAL +F M+ ++++ ++++ I+ ++G + EA +
Sbjct: 403 YNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 475 EMSQVPSVAAYNCLTKGLCKIG 496
P + Y + GLC G
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKG 484
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 153/370 (41%), Gaps = 63/370 (17%)
Query: 144 KQKGYKHNFASYNALAYCLSRNNLFRAADQV----------------PELMDS---QGRI 184
++KG + N +Y AL L ++ + A ++ L+D+ G++
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 185 AEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTL 244
E E+ E+M R PD+ Y+++I L +D ++++ M ADV++Y TL
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 245 IMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGY 304
I G CK RV G +LFREM + G++ + Y LI+G G V KA + + G
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 305 RADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFK 364
D+ YN ++GGLC + +KA +FE + ++ D T ++ + G+++ +
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456
Query: 365 LLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNILMGALLE 424
L + LKG + Y +M L
Sbjct: 457 LFCSL---------------------------------SLKGLK-PDIVTYTTMMSGLCT 482
Query: 425 IGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAA 484
G + + L+ KM+ L N C + GDI + E K++ PS+
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSLLK 534
Query: 485 YNCLTKGLCK 494
+ G+CK
Sbjct: 535 D--IKSGVCK 542
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 196/424 (46%), Gaps = 31/424 (7%)
Query: 119 PDLVAEVL-KVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQV--- 174
P L+ VL + + L +FF WA KQ GY H++ ++ LS+ F A +
Sbjct: 97 PGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEE 156
Query: 175 -----PELMD------------SQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAER 217
PEL++ S + + +E+L++M + +PD + + ++ L
Sbjct: 157 MRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNG 216
Query: 218 NLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYG 277
++ +V+E+M++ ++ + +L+ G C+ G+++ E+ +MKE G+ D ++
Sbjct: 217 SVKEASKVFEDMREKF-PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFT 275
Query: 278 VLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRV-KQFDKAYKLFEVTVQ 336
L+ G GK+ A DL+ D+ G+ ++ Y +I LCR K+ D+A ++F +
Sbjct: 276 NLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER 335
Query: 337 DDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERI 394
D T L+ + G +D + +L M K V + + +V K+E+
Sbjct: 336 YGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK--GVMPSQVTYMQIMVAHEKKEQF 393
Query: 395 MMALDVFEELKGKG-YSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIA 453
L++ E++K +G + + IYN+++ ++GEVK+A+ L+ +M L +F I
Sbjct: 394 EECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIM 453
Query: 454 IQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMML--VRDCLGN 511
I G ++EAC H K + + S Y L L + D M V C+ N
Sbjct: 454 INGFTSQGFLIEACN-HFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISN 512
Query: 512 VASG 515
S
Sbjct: 513 KTSS 516
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 145/320 (45%), Gaps = 41/320 (12%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLA-AERNLDACLRVWEEMKKDLVEADVMA 240
G++A+ +++ MR+ +P+V YT +I+ L E+ +D +RV+ EM++ EAD++
Sbjct: 285 GKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVT 344
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y LI G CK G + +G+ + +M++ G++ + Y ++ + + + +L++ +
Sbjct: 345 YTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMK 404
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMD 360
G DL IYN +I C++ + +A +L+ + L+P +D
Sbjct: 405 RRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPG----------------VD 448
Query: 361 NFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNILMG 420
F ++ F ++ A + F+E+ +G S P Y L
Sbjct: 449 TFVIMINGFTSQGF-------------------LIEACNHFKEMVSRGIFSAPQYGTLKS 489
Query: 421 ALLEIG-----EVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIE 475
L + E+ K ++ + + E+N +++I I G + EAC ++E
Sbjct: 490 LLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMME 549
Query: 476 MSQVPSVAAYNCLTKGLCKI 495
M +P Y L KGL K+
Sbjct: 550 MDLMPQPNTYAKLMKGLNKL 569
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 173 QVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKD 232
Q+ + + + E LE++EKM+R C PD+ Y +IR+ + +R+W EM+ +
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 233 LVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGV---LIEGLVGEGKV 289
+ V +V +I G G ++ F+EM GI YG L+ LV + K+
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF-SAPQYGTLKSLLNNLVRDDKL 500
Query: 290 GKACDLLKDLVDSGYRADLGI 310
A D+ + + +L +
Sbjct: 501 EMAKDVWSCISNKTSSCELNV 521
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 207/469 (44%), Gaps = 38/469 (8%)
Query: 115 RRVTPDLVAEVLK-VENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQ 173
+ + P + EV+K ++NNP + +F+ ++ + +H+F +YN L L + L A Q
Sbjct: 65 KNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQ 124
Query: 174 VPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDL 233
+ E M S G ++ +L + + + + + + + E
Sbjct: 125 MFECMKSDG-VSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE----------------- 166
Query: 234 VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKAC 293
VE M +L+ L K RV +LF E D + +LI GL G GK KA
Sbjct: 167 VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKAL 226
Query: 294 DLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLF-EVTVQDDLAPDFSTVNPLLVC 352
+LL + G D+ YN++I G C+ + +KA ++F +V +PD T ++
Sbjct: 227 ELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 353 CAEMGRMDNFFKLLAQMEKL-------KFSVAAD-LEKFFEFLVGKEER-IMMALDVFEE 403
+ G+M LL M +L F+V D K E L +E R M++ F +
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 404 LKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDI 463
V + L+ +G+V + L+ +M + N+ ++SI I +
Sbjct: 347 --------VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 464 LEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYAL 523
L+A E ++ +P YN + G CK G+++ A ++V + + P + + +
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE-MEKKKCKPDKITFTI 457
Query: 524 TILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEA 572
I+ C G + + + ++M GC P+++ S+++S + K G +EA
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 165/393 (41%), Gaps = 43/393 (10%)
Query: 223 LRVWEEMKKDL-VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIE 281
R WE + L + Y L LCK G ++F MK +G+ + + G L+
Sbjct: 87 FRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVS 146
Query: 282 GLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAP 341
+GK+ A LL L + NS++ L ++ + + A KLF+ ++
Sbjct: 147 SFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN 204
Query: 342 DFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALD 399
D T N L+ +G+ + +LL M F D+ + + G K + A +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSG--FGCEPDIVTYNTLIQGFCKSNELNKASE 262
Query: 400 VFEELKGKGYSS--VPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCH 457
+F+++K S V Y ++ + G++++A L M L + +++F++ + +
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 458 VESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMML------------- 504
++G++L A E K+I P V + L G C++G++ L
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 505 ------------------VRDCLGNVASG---PTEFKYALTILHVCRSGEAEKIIEVLNE 543
R+ LG +AS P F Y I C++G+ + ++ E
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 544 MTQEGCPPNEVICSAIISGMCKHGTLEEARKVF 576
M ++ C P+++ + +I G C G + EA +F
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 5/288 (1%)
Query: 305 RADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFK 364
R YN + LC+ D A ++FE D ++P+ + L+ AE G++
Sbjct: 100 RHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATA 159
Query: 365 LLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEE-LKGKGYSSVPIYNILMGALL 423
LL Q +++ + LV K +R+ A+ +F+E L+ + + +NIL+ L
Sbjct: 160 LLLQSFEVE-GCCMVVNSLLNTLV-KLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 424 EIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQV-PSV 482
+G+ +KAL L G M G E + ++++ IQ +S ++ +A E + S P V
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 483 AAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLN 542
Y + G CK G++ A L+ D L + PT + + + ++GE E+
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDML-RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 543 EMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
+M GC P+ V +++I G C+ G + + +++ + R + A T
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAE-RNLDACLRVWEEMKKDLVEADVMA 240
G++++ + E+M P+ F Y+ +I L E R L A + + KD++ M
Sbjct: 361 GQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM- 419
Query: 241 YVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV 300
Y +I G CK G+V + + EM++ D+ + +LI G +G++ +A + +V
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 301 DSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQ---DDLAP-DFSTVNPLLVCC 353
G D +S++ L + +AY L ++ + +++ P + T N L C
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTANATLAAC 536
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 4/202 (1%)
Query: 401 FEELKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVES 460
F K S YN+L +L + G A +F M+ + N+ + E
Sbjct: 92 FSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEK 151
Query: 461 GDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFK 520
G + A + E+ V N L L K+ ++ AM L + L + T+
Sbjct: 152 GKLHFATALLLQSFEVEGCCMVV--NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK-T 208
Query: 521 YALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLR 580
+ + I +C G+AEK +E+L M+ GC P+ V + +I G CK L +A ++F +++
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 581 ERKLLTEANTIVYDEILIEHMK 602
+ + + + Y ++ + K
Sbjct: 269 SGSVCS-PDVVTYTSMISGYCK 289
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 132/549 (24%), Positives = 230/549 (41%), Gaps = 75/549 (13%)
Query: 100 QFQWGPQVVTELSKLRRVTP-----------DLVAEVLKVENNPTLASKFFHWAGKQKGY 148
+F +V++ L+K + + P +++ V+K E N L +FF WA +++
Sbjct: 30 EFNISGEVISILAKKKPIEPALEPLVPFLSKNIITSVIKDEVNRQLGFRFFIWASRRERL 89
Query: 149 KHNFASYNALAYCLSRNNLFRAADQVPELMDS-------------------QGRIAEMLE 189
+ S+ + LS +N Q E + S G + +E
Sbjct: 90 RSR-ESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVE 148
Query: 190 ILEKMRRNLCKPDVFAYTAMIRVLAAERNLDA-CLRVWEEMKKDLVEADVMAYVTLIMGL 248
+M+ C+PDVF Y ++RV+ E V+ EM K ++ + L+ GL
Sbjct: 149 SFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGL 208
Query: 249 CKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADL 308
K GR ++F +M GI +R Y +LI GL G A L ++ SG D
Sbjct: 209 YKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDS 268
Query: 309 GIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQ 368
+N+++ G C++ + +A++L + +D + L+ R F+L A
Sbjct: 269 VAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYAN 328
Query: 369 MEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEI 425
M LK ++ D+ + + G K +I AL + + KG S YN ++ AL
Sbjct: 329 M--LKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGR 386
Query: 426 GEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAY 485
G +++ L +M ++ + +I I +G + EA E +I + PSVA +
Sbjct: 387 GLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATF 446
Query: 486 NCLTKGLCKIGEIDAAMMLV------------------------------------RDC- 508
N L GLCK GE+ A +L+ RD
Sbjct: 447 NALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLA 506
Query: 509 -LGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHG 567
+ S P Y + I CR+G+ + +++LN + +G P+ V + +I+G+ + G
Sbjct: 507 HFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVG 566
Query: 568 TLEEARKVF 576
EEA K+F
Sbjct: 567 REEEAFKLF 575
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 199/512 (38%), Gaps = 84/512 (16%)
Query: 152 FASYNALAYCLSRNNLFRAADQVPELMDS---QGRIAEMLEILEKMRRNLCKPDVFAYTA 208
FA YN + C NL+ LMD +GR ++ ++ + M P+ YT
Sbjct: 183 FAVYNEMLKCNCSPNLY----TFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 209 MIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENG 268
+I L + D +++ EM+ D +A+ L+ G CK GR+V EL R +++G
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 269 ILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAY 328
++ Y LI+GL + +A +L +++ + D+ +Y +I GL + + + A
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDAL 358
Query: 329 KLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLV 388
KL ++PD N ++ G ++ L +M + + A +
Sbjct: 359 KLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSM 418
Query: 389 GKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGKM--------- 438
+ + A ++F E++ G S SV +N L+ L + GE+K+A L KM
Sbjct: 419 CRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLF 478
Query: 439 --------RGLNLEVNS----------------------LSFSIAIQCHVESGDILEACE 468
R + V S +S+++ I +GDI A +
Sbjct: 479 LRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALK 538
Query: 469 CHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMML--VRDCLGNVASGPTEFKYALT-- 524
N + P YN L GL ++G + A L +D + P ++ +T
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKD---DFRHSPAVYRSLMTWS 595
Query: 525 ------------------------------ILHVCRSGEAEKIIEVLNEMTQEGCPPNEV 554
I + GE E+ + L E+
Sbjct: 596 CRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLG 655
Query: 555 ICSAIISGMCKHGTLEEARKVFTNLRERKLLT 586
+ + G+C+ G EA VF+ LRE+K+L
Sbjct: 656 PYTIWLIGLCQSGRFHEALMVFSVLREKKILV 687
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 174/436 (39%), Gaps = 46/436 (10%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAY 241
GR+ E E+L ++ + Y+++I L R ++ M K ++ D++ Y
Sbjct: 282 GRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILY 341
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
LI GL K G++ +L M GI D Y +I+ L G G + + L ++ +
Sbjct: 342 TILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSE 401
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDN 361
+ D + +I +CR +A ++F + +P +T N L+ + G +
Sbjct: 402 TESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKE 461
Query: 362 FFKLLAQME-----KLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIY 415
LL +ME L ++ + F+ +V + I+ A G S + Y
Sbjct: 462 ARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV-ESGSILKAYRDLAHFADTGSSPDIVSY 520
Query: 416 NILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIE 475
N+L+ G++ AL L ++ L +S++++ I G EA + +
Sbjct: 521 NVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDD 580
Query: 476 MSQVPSV---------------AAYNCLTKGLCKI-----------------GEIDAAMM 503
P+V A+N K L KI GE + A+
Sbjct: 581 FRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALR 640
Query: 504 LVRDCLGNVASGPTEFKYALTILHVCRSG---EAEKIIEVLNEMTQEGCPPNEVICSAII 560
+ + L T Y + ++ +C+SG EA + VL E PP+ C +I
Sbjct: 641 RLIE-LDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPS---CVKLI 696
Query: 561 SGMCKHGTLEEARKVF 576
G+CK L+ A +VF
Sbjct: 697 HGLCKREQLDAAIEVF 712
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 149/374 (39%), Gaps = 43/374 (11%)
Query: 178 MDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEAD 237
+ G+I + L++L M PD + Y A+I+ L L+ + EM + D
Sbjct: 348 LSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPD 407
Query: 238 VMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGL-------------- 283
+ LI +C+ G V E+F E++++G A + LI+GL
Sbjct: 408 ACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLH 467
Query: 284 -------------------------VGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGL 318
V G + KA L D+G D+ YN +I G
Sbjct: 468 KMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGF 527
Query: 319 CRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAA 378
CR D A KL V L+PD T N L+ +GR + FKL + + S A
Sbjct: 528 CRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPA- 586
Query: 379 DLEKFFEFLVGKEERIMMALDVF-EELKGKGYSSVPIYNILMGALLEIGEVKKALYLFGK 437
+ + ++ ++++A +++ + LK N + E GE ++AL +
Sbjct: 587 -VYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKE-GETERALRRLIE 644
Query: 438 MRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGE 497
+ E+ ++I + +SG EA + + E + + + L GLCK +
Sbjct: 645 LDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQ 704
Query: 498 IDAAMMLVRDCLGN 511
+DAA+ + L N
Sbjct: 705 LDAAIEVFLYTLDN 718
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 145/325 (44%), Gaps = 19/325 (5%)
Query: 276 YGVLIEGLVGEGKVGKACDL----LKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLF 331
+G++I+ L + CDL L++L G D + +I ++ +KA + F
Sbjct: 95 FGLVIDMLSED----NGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESF 150
Query: 332 EVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQM--EKLKFSVAADLEKFFEFLVG 389
+ D PD T N +L M R + FF L + E LK + + +L F + G
Sbjct: 151 GRMKEFDCRPDVFTYNVILRV---MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDG 207
Query: 390 --KEERIMMALDVFEELKGKGYSSVPI-YNILMGALLEIGEVKKALYLFGKMRGLNLEVN 446
K+ R A +F+++ G+G S + Y IL+ L + G A LF +M+ +
Sbjct: 208 LYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPD 267
Query: 447 SLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVR 506
S++ + + + G ++EA E + V + Y+ L GL + A L
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 507 DCLG-NVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCK 565
+ L N+ P Y + I + ++G+ E +++L+ M +G P+ +A+I +C
Sbjct: 328 NMLKKNIK--PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCG 385
Query: 566 HGTLEEARKVFTNLRERKLLTEANT 590
G LEE R + + E + +A T
Sbjct: 386 RGLLEEGRSLQLEMSETESFPDACT 410
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 139/325 (42%), Gaps = 7/325 (2%)
Query: 259 ELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGL 318
+ E+K G+ +D + VLI G KA + + + R D+ YN I+ +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 319 CRVKQFDK-AYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVA 377
R + F A+ ++ ++ + +P+ T L+ + GR + K+ M ++
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGR--GIS 230
Query: 378 ADLEKFFEFLVGKEERIMM--ALDVFEELKGKG-YSSVPIYNILMGALLEIGEVKKALYL 434
+ + + G +R A +F E++ G Y +N L+ ++G + +A L
Sbjct: 231 PNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL 290
Query: 435 FGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCK 494
+ +S I + +A E + +++ + P + Y L +GL K
Sbjct: 291 LRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSK 350
Query: 495 IGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEV 554
G+I+ A+ L+ + + P + Y I +C G E+ + EM++ P+
Sbjct: 351 AGKIEDALKLLSS-MPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDAC 409
Query: 555 ICSAIISGMCKHGTLEEARKVFTNL 579
+ +I MC++G + EA ++FT +
Sbjct: 410 THTILICSMCRNGLVREAEEIFTEI 434
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 206/456 (45%), Gaps = 29/456 (6%)
Query: 195 RRNLCK---PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKG 251
+R LC+ P+V YT +I+ L + + ++ ++ K +E ++ Y +LI G CK
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439
Query: 252 GRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIY 311
G + G L+ +M + G D IYGVL++GL +G + A ++ R ++ ++
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 312 NSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEK 371
NS+I G CR+ +FD+A K+F + + PD +T ++ GR++ L +M K
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 372 LKFSVAADLEKFFEFLVGKEERIMMALDVFEEL-KGKGYSSVPIYNILMGALLEIGEVKK 430
+ A K + + L +F+ + + K + + + N+++ L + ++
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619
Query: 431 ALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQV----PSVAAYN 486
A F + +E + ++++ I + + EA +I E+ +V P+
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA----ERIFELLKVTPFGPNTVTLT 675
Query: 487 CLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQ 546
L LCK ++D A+ + + S P Y + +S + E ++ EM +
Sbjct: 676 ILIHVLCKNNDMDGAIRMF-SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 547 EGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTE-------------ANTIVY 593
+G P+ V S II G+CK G ++EA +F + KLL + +V
Sbjct: 735 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE 794
Query: 594 DEILIEHMKK---KTADLVLSGLKFFGLESKLKAKG 626
+L EHM + K DL+ L + L +KG
Sbjct: 795 AALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKG 830
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 147/329 (44%), Gaps = 34/329 (10%)
Query: 183 RIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYV 242
R E L++ M KPDV +T ++RV E L+ L ++ M K +E D +AY
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 243 TLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDS 302
TLI CK + G +LF M+ N I D A+ V+I L ++ A +L++
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 303 GYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNF 362
D+ YN++I G C +++ D+A ++FE+ P+ T+ L+ + MD
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 363 FKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNILMGAL 422
++ FS+ A+ KG ++V Y LM
Sbjct: 691 IRM--------FSIMAE-------------------------KGSKPNAVT-YGCLMDWF 716
Query: 423 LEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSV 482
+ +++ + LF +M+ + + +S+SI I + G + EA ++ I+ +P V
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776
Query: 483 AAYNCLTKGLCKIGEIDAAMMLVRDCLGN 511
AY L +G CK+G + A +L L N
Sbjct: 777 VAYAILIRGYCKVGRLVEAALLYEHMLRN 805
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/478 (21%), Positives = 195/478 (40%), Gaps = 81/478 (16%)
Query: 201 PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHEL 260
P+V + +I +D +++ M++ +E D++AY TLI G K G + GH+L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 261 FREMKENGILIDRAI-----------------------------------YGVLIEGLVG 285
F + G+ +D + Y +LI+GL
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 286 EGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFST 345
+G++ +A + ++ G + Y+S+I G C+ + L+E ++ PD
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 346 VNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEE 403
L+ ++ G M + + +M L S+ ++ F + G + R AL VF
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKM--LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 404 LKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVE--- 459
+ G V + +M + G +++AL+LF +M + LE ++L++ I +
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 460 ----------------SGDILEAC--------ECH---------NKIIEMSQVPSVAAYN 486
S DI C +CH N +IE P + YN
Sbjct: 582 PTIGLQLFDLMQRNKISADI-AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 640
Query: 487 CLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQ 546
+ G C + +D A + + L GP + I +C++ + + I + + M +
Sbjct: 641 TMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 547 EGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEHMKKK 604
+G PN V ++ K +E + K+F ++E+ + + +IV I+I+ + K+
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI---SPSIVSYSIIIDGLCKR 754
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 131/582 (22%), Positives = 247/582 (42%), Gaps = 73/582 (12%)
Query: 88 IARFITDAFRKNQFQWGPQVVTELSKLRRVTPDLVAEVLKVENNPTLASKFFHWA---GK 144
+A I+ A ++ F V S L+R +LV +L +E+ P A K+F WA GK
Sbjct: 42 LAAGISKAIKEGNFNLLDSSVYG-SNLQRNETNLV--LLSLESEPNSALKYFRWAEISGK 98
Query: 145 QKGYKHNFASYNALAYCLSRNNLFRAADQV-PELMDSQGRIAEMLEILE--KMRRNLCK- 200
S+ +A+ L RN +F AD+V E++ ++G+ +L + + ++CK
Sbjct: 99 D-------PSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF 151
Query: 201 --------------PDVFAYTA-------------MIRVLAAERNLDACLRVWEEMKKDL 233
++F Y+ M+ L +D ++++ +
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 234 VE-ADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKA 292
+E + V A+ ++ L G V + + R + E G + +++GL + ++ A
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVA 270
Query: 293 CDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVC 352
LL ++D G ++ + ++I G C+ + D+A+ LF+V Q + PD + L+
Sbjct: 271 SRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG 330
Query: 353 CAEMGRMDNFFKLLAQ-------MEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELK 405
+ G + KL +Q ++ + FS D+ K + A V++ +
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYV-------KSGDLATASVVYKRML 383
Query: 406 GKGYS-SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDIL 464
+G S +V Y IL+ L + G + +A ++G++ +E + +++S I + G++
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 465 EACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALT 524
+ +I+M P V Y L GL K G + AM LG +L
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL- 502
Query: 525 ILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKL 584
I CR ++ ++V M G P+ + ++ G LEEA +F R K+
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA--LFLFFRMFKM 560
Query: 585 LTEANTIVYDEIL---IEHMKKKTADLVLSGLKFFGLESKLK 623
E + + Y ++ +HMK GL+ F L + K
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTI------GLQLFDLMQRNK 596
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/398 (19%), Positives = 164/398 (41%), Gaps = 35/398 (8%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAY 241
G + + E M + PDV Y ++ L+ + + +R +M + +V+ +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
+LI G C+ R ++FR M GI D A + ++ + EG++ +A L +
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDN 361
G D Y ++I C+ + +LF++ ++ ++ D + N ++
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI----------- 608
Query: 362 FFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYNILMGA 421
LL + +++ D KFF L+ +GK + YN ++
Sbjct: 609 --HLLFKCHRIE-----DASKFFNNLI----------------EGKMEPDIVTYNTMICG 645
Query: 422 LLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPS 481
+ + +A +F ++ N+++ +I I ++ D+ A + + E P+
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 705
Query: 482 VAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVL 541
Y CL K +I+ + L + + P+ Y++ I +C+ G ++ +
Sbjct: 706 AVTYGCLMDWFSKSVDIEGSFKLFEE-MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 542 NEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNL 579
++ P+ V + +I G CK G L EA ++ ++
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 135 ASKFFHWAGKQKGYKHNFASYNAL--AYCLSRNNLFRAADQVPELMDSQGRIAEMLEILE 192
ASKFF+ + K + + +YN + YC R +D RI E+L++
Sbjct: 620 ASKFFNNLIEGK-MEPDIVTYNTMICGYCSLRR------------LDEAERIFELLKVTP 666
Query: 193 KMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGG 252
P+ T +I VL ++D +R++ M + + + + Y L+ K
Sbjct: 667 ------FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 720
Query: 253 RVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYN 312
+ +LF EM+E GI Y ++I+GL G+V +A ++ +D+ D+ Y
Sbjct: 721 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 780
Query: 313 SIIGGLCRVKQFDKAYKLFEVTVQDDLAPD 342
+I G C+V + +A L+E +++ + PD
Sbjct: 781 ILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 117 VTPDLVAEVLKVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPE 176
VT ++ VL N+ A + F +KG K N +Y L S++
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMA-EKGSKPNAVTYGCLMDWFSKS----------- 719
Query: 177 LMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEA 236
+D +G ++ E+M+ P + +Y+ +I L +D ++ + +
Sbjct: 720 -VDIEGS----FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 774
Query: 237 DVMAYVTLIMGLCKGGRVVRGHELFREMKENGI----LIDRAI 275
DV+AY LI G CK GR+V L+ M NG+ L+ RA+
Sbjct: 775 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 171/354 (48%), Gaps = 6/354 (1%)
Query: 235 EADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACD 294
E ++ + +L+ G C+G RV +F +M G + IY +I+GL +V A D
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 295 LLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCA 354
LL + G D+ YNS+I GLC ++ A ++ + ++ PD T N L+ C
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 355 EMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKG-YSS 411
+ GR+ + +M ++ S+ D+ + + G R+ A ++F + KG +
Sbjct: 268 KEGRVSEAEEFYEEM--IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 412 VPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHN 471
V Y+IL+ + +V+ + LF +M + N+++++I IQ + +G + A E
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 472 KIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRS 531
+++ P++ YN L GLC G+I+ A++++ D N Y + I +C++
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI-VTYNIIIRGMCKA 444
Query: 532 GEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLL 585
GE ++ + +G P+ + ++ G+ K G EA +F ++E +L
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 159/324 (49%), Gaps = 8/324 (2%)
Query: 183 RIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYV 242
R+ + L + ++M KP+V Y +I L + +D L + M+KD + DV+ Y
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 243 TLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDS 302
+LI GLC GR + M + I D + LI+ V EG+V +A + ++++
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 303 GYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNF 362
D+ Y+ +I GLC + D+A ++F V PD T + L+ + ++++
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 363 FKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKG-YSSVPIYNILM 419
KL +M + V + + + G + ++ +A ++F + G + ++ YN+L+
Sbjct: 346 MKLFCEMSQR--GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 420 GALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQV 479
L + G+++KAL + M+ ++ + ++++I I+ ++G++ +A + + + +
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM 463
Query: 480 PSVAAYNCLTKGLCKIG---EIDA 500
P + Y + GL K G E DA
Sbjct: 464 PDIWTYTTMMLGLYKKGLRREADA 487
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 5/263 (1%)
Query: 180 SQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVM 239
S GR ++ ++ M + PDVF + A+I E + +EEM + ++ D++
Sbjct: 233 SSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 240 AYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDL 299
Y LI GLC R+ E+F M G D Y +LI G KV L ++
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 300 VDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRM 359
G + Y +I G CR + + A ++F V + P+ T N LL + G++
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 360 DNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYN 416
+ +LA M+ K + AD+ + + G K + A D++ L +G + Y
Sbjct: 413 EKALVILADMQ--KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYT 470
Query: 417 ILMGALLEIGEVKKALYLFGKMR 439
+M L + G ++A LF KM+
Sbjct: 471 TMMLGLYKKGLRREADALFRKMK 493
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 150/358 (41%), Gaps = 24/358 (6%)
Query: 245 IMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGY 304
I G C R +REM NGI K+ + DL +V
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRF---------------MKLDDSLDLFFHMVQCRP 77
Query: 305 RADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFK 364
+ ++ ++ + ++K++D L+E + + T N LL C ++
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 365 LLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNILMGA 421
L +M KL + F L G + +R+ AL +F+++ G GY +V IYN ++
Sbjct: 138 FLGKMIKLGHE--PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDG 195
Query: 422 LLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPS 481
L + +V AL L +M + + ++++ I SG +A + + + P
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Query: 482 VAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVL 541
V +N L K G + A + + + P Y+L I +C ++ E+
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRR-SLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 542 NEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIE 599
M +GC P+ V S +I+G CK +E K+F + +R ++ NT+ Y ILI+
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR--NTVTY-TILIQ 369
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%)
Query: 202 DVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELF 261
+ YT +I+ L+ ++ M V +++ Y L+ GLC G++ + +
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 262 REMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRV 321
+M++NG+ D Y ++I G+ G+V A D+ L G D+ Y +++ GL +
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Query: 322 KQFDKAYKLFEVTVQDDLAPD 342
+A LF +D + P+
Sbjct: 480 GLRREADALFRKMKEDGILPN 500
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 202/468 (43%), Gaps = 28/468 (5%)
Query: 131 NPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEI 190
NP FF+ G ++ +FAS + + RN R +D + ++ + +++
Sbjct: 23 NPPTVPSFFNLCG-SGCWERSFASASGDYREILRN---RLSDII--------KVDDAVDL 70
Query: 191 LEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCK 250
M ++ P + + ++ +A + + + E+M+ + D+ Y I C+
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 251 GGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGI 310
++ + +M + G D L+ G ++ A L+ +V+ GY+ D
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 311 YNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQME 370
+ ++I GL + +A L + VQ PD T ++ + G +D LL +ME
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 371 KLKFSVAADLEKFFEFL--VGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGE 427
+ + A++ F + + K + +A+D+F E++ KG +V YN L+ L G
Sbjct: 251 AAR--IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 428 VKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNC 487
A L M + N ++F+ I + G ++EA + H ++I+ S P YN
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 488 LTKGLCKIGEIDAA-----MMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLN 542
L G C +D A M+ +DCL N+ + Y I C+ E +E+
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT------YNTLINGFCKCKRVEDGVELFR 422
Query: 543 EMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
EM+Q G N V + II G + G + A+ VF + ++ T+ T
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 206/467 (44%), Gaps = 30/467 (6%)
Query: 147 GYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQG-------------------RIAEM 187
G H+ +Y+ C R + A V M G RI++
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 188 LEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMG 247
+ ++++M KPD F +T +I L + + ++M + + D++ Y T++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 248 LCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRAD 307
LCK G + L +M+ I + I+ +I+ L V A DL ++ G R +
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 308 LGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLA 367
+ YNS+I LC ++ A +L ++ + P+ T N L+ + G++ KL
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 368 QMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKG-YSSVPIYNILMGALLE 424
+M ++ S+ D + + G R+ A +F+ + K ++ YN L+ +
Sbjct: 353 EM--IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 425 IGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPS-VA 483
V+ + LF +M L N+++++ IQ ++GD A +++ ++VP+ +
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS-NRVPTDIM 469
Query: 484 AYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNE 543
Y+ L GLC G++D A+++ + L F Y I +C++G K+ E +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFK-YLQKSEMELNIFIYNTMIEGMCKAG---KVGEAWDL 525
Query: 544 MTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
P+ V + +ISG+C L+EA +F ++E L + T
Sbjct: 526 FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 140/321 (43%), Gaps = 31/321 (9%)
Query: 144 KQKGYKHNFASYNALAYCLSRNNLFRAADQV----------------PELMDS---QGRI 184
+ KG + N +YN+L CL + A ++ L+D+ +G++
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Query: 185 AEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTL 244
E ++ E+M + PD Y +I LD ++++ M ++ Y TL
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTL 404
Query: 245 IMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGY 304
I G CK RV G ELFREM + G++ + Y +I+G G A + K +V +
Sbjct: 405 INGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV 464
Query: 305 RADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFK 364
D+ Y+ ++ GLC + D A +F+ + ++ + N ++ + G++ +
Sbjct: 465 PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD 524
Query: 365 LLAQMEKLKFSVAADLEKFFEFLVGKEERIMM--ALDVFEELKGKGYSSVP---IYNILM 419
L + S+ D+ + + G + ++ A D+F ++K G ++P YN L+
Sbjct: 525 LFCSL-----SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG--TLPNSGTYNTLI 577
Query: 420 GALLEIGEVKKALYLFGKMRG 440
A L + + L +MR
Sbjct: 578 RANLRDCDRAASAELIKEMRS 598
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 180 SQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVM 239
S G++ L I + ++++ + ++F Y MI + + W+ ++ DV+
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG---EAWDLFCSLSIKPDVV 536
Query: 240 AYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDL 299
Y T+I GLC + +LFR+MKE+G L + Y LI + + + +L+K++
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Query: 300 VDSGYRADLGIYNSIIGGLCRVKQFDKAY 328
SG+ D S++ + + DK++
Sbjct: 597 RSSGFVGDASTI-SLVTNMLHDGRLDKSF 624
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 210/504 (41%), Gaps = 77/504 (15%)
Query: 122 VAEVLKVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQ 181
V + L+ E+ LA FF +KH ++ + L+ + + + + M Q
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 182 G------------------RIAE-MLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDAC 222
G +AE +E+ +++ C P V Y ++ L E +
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMI 165
Query: 223 LRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEG 282
V+ +MK+D E +V Y L+ LCK +V +L EM G D Y +I
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 283 LVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPD 342
+ G V + +L + + + +YN++I GLC+ + A++L V+ ++P+
Sbjct: 226 MCEVGLVKEGRELAER-----FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPN 280
Query: 343 FSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFE 402
+ + L+ G+++ F L QM K
Sbjct: 281 VISYSTLINVLCNSGQIELAFSFLTQMLK------------------------------- 309
Query: 403 ELKGKGYSSVPIYNILMGALLEIGEVKKALYLFGKM-RGLNLEVNSLSFSIAIQCHVESG 461
+G + + +++ G L G AL L+ +M RG L+ N ++++ +Q G
Sbjct: 310 --RGCHPNIYTLSSLVKGCFLR-GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 462 DILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAM-----MLVRDCLGNVASGP 516
+I++A + + E+ P++ Y L G K G +D A+ ML C NV
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV-- 424
Query: 517 TEFKYALTILHVCRSG---EAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEAR 573
Y + +CR EAE +IE+ M++E C P+ +A I G+C G L+ A
Sbjct: 425 ----YTNMVEALCRHSKFKEAESLIEI---MSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 574 KVFTNLRERKLLTEANTIVYDEIL 597
KVF + E++ N + Y+E+L
Sbjct: 478 KVFRQM-EQQHRCPPNIVTYNELL 500
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 186/443 (41%), Gaps = 44/443 (9%)
Query: 172 DQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKK 231
+ V + + + RI + + M+R+ +P+VF Y +++ L +D ++ EM
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 209
Query: 232 DLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGK 291
D ++Y T+I +C+ G V G EL + ++Y LI GL E
Sbjct: 210 KGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEP-----VVSVYNALINGLCKEHDYKG 264
Query: 292 ACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLV 351
A +L++++V+ G ++ Y+++I LC Q + A+ ++ P+ T++ L+
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324
Query: 352 CCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGY 409
C G + L QM + F + ++ + + G I+ A+ VF ++ G
Sbjct: 325 GCFLRGTTFDALDLWNQMIR-GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC 383
Query: 410 S-SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACE 468
S ++ Y L+ + G + A+Y++ KM N + ++ ++ EA
Sbjct: 384 SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAES 443
Query: 469 CHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRD------CLGNVAS-------- 514
+ + + PSV +N KGLC G +D A + R C N+ +
Sbjct: 444 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Query: 515 ---GPTEFKYAL-----------------TILH-VCRSGEAEKIIEVLNEMTQEGCPPNE 553
E Y L T+LH C +G ++++ +M +G P+E
Sbjct: 504 AKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDE 563
Query: 554 VICSAIISGMCKHGTLEEARKVF 576
+ + II CK G E A ++
Sbjct: 564 ITMNMIILAYCKQGKAERAAQML 586
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 156/360 (43%), Gaps = 31/360 (8%)
Query: 145 QKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVF 204
+KG N SY+ L L + G+I L +M + C P+++
Sbjct: 274 EKGISPNVISYSTLINVLC----------------NSGQIELAFSFLTQMLKRGCHPNIY 317
Query: 205 AYTAMIRVLAAERNLDACLRVWEEMKKDL-VEADVMAYVTLIMGLCKGGRVVRGHELFRE 263
+++++ L +W +M + ++ +V+AY TL+ G C G +V+ +F
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSH 377
Query: 264 MKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQ 323
M+E G + YG LI G G + A + ++ SG ++ +Y +++ LCR +
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 324 FDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKF 383
F +A L E+ +++ AP T N + + GR+D K+ QME+ + ++ +
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ-QHRCPPNIVTY 496
Query: 384 FEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGKMRG 440
E L G K RI A + E+ +G S YN L+ G AL L GKM
Sbjct: 497 NELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMV 556
Query: 441 LNLEVNSLSFSIAIQCHVESG------DILEACECHNKIIEMSQVPSVAAYNCLTKGLCK 494
+ ++ ++ I + + G +L+ C + P V +Y + GLC+
Sbjct: 557 DGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRR----KWRPDVISYTNVIWGLCR 612
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 190/450 (42%), Gaps = 24/450 (5%)
Query: 144 KQKGYKHNFASYNALAYCLSRNNLFRAADQV----------PELMDSQGRIAEMLEI-LE 192
K+ G++ N +YN L L +NN A ++ P+ + I+ M E+ L
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232
Query: 193 KMRRNLCK---PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLC 249
K R L + P V Y A+I L E + + EM + + +V++Y TLI LC
Sbjct: 233 KEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLC 292
Query: 250 KGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDS-GYRADL 308
G++ +M + G + L++G G A DL ++ G + ++
Sbjct: 293 NSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNV 352
Query: 309 GIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQ 368
YN+++ G C KA +F + +P+ T L+ A+ G +D + +
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNK 412
Query: 369 MEKLKFSVAADLEKFFEFL--VGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEI 425
M L ++ + + + + + A + E + + + SVP +N + L +
Sbjct: 413 M--LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 426 GEVKKALYLFGKMRGLN-LEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAA 484
G + A +F +M + N ++++ + ++ I EA +I S +
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Query: 485 YNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEM 544
YN L G C G A+ LV + + P E + IL C+ G+AE+ ++L+ +
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVD-GKSPDEITMNMIILAYCKQGKAERAAQMLDLV 589
Query: 545 T--QEGCPPNEVICSAIISGMCKHGTLEEA 572
+ + P+ + + +I G+C+ E+
Sbjct: 590 SCGRRKWRPDVISYTNVIWGLCRSNCREDG 619
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 174/421 (41%), Gaps = 58/421 (13%)
Query: 197 NLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVR 256
NL K + MIR LA + +D+ + ++MK ++++I + G R
Sbjct: 70 NLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAER 129
Query: 257 GHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIG 316
E+F +KE G IY +++ L+GE ++ + +D+ G+ ++ YN ++
Sbjct: 130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 189
Query: 317 GLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSV 376
LC+ + D A KL PD + ++ E+G + +L + E +
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVY 249
Query: 377 AADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALYLF 435
A + + KE A ++ E+ KG S +V Y+ L+ L G+++ A
Sbjct: 250 NALING-----LCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 436 GKM--RGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIE-MSQVPSVAAYNCLTKGL 492
+M RG + + +LS S+ C + G +A + N++I P+V AYN L +G
Sbjct: 305 TQMLKRGCHPNIYTLS-SLVKGCFLR-GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 493 CKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPN 552
C G I K + V + M + GC PN
Sbjct: 363 CSHGNI------------------------------------VKAVSVFSHMEEIGCSPN 386
Query: 553 EVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEA---NTIVYD---EILIEHMKKKTA 606
++I+G K G+L+ A ++ K+LT N +VY E L H K K A
Sbjct: 387 IRTYGSLINGFAKRGSLDGAVYIWN-----KMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441
Query: 607 D 607
+
Sbjct: 442 E 442
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 204/480 (42%), Gaps = 61/480 (12%)
Query: 144 KQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDV 203
++KG + +YN L S S+G + E E++ M P V
Sbjct: 262 QEKGVYPDIVTYNTLISAYS----------------SKGLMEEAFELMNAMPGKGFSPGV 305
Query: 204 FAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFRE 263
+ Y +I L + V+ EM + + D Y +L+M CK G VV ++F +
Sbjct: 306 YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD 365
Query: 264 M-----------------------------------KENGILIDRAIYGVLIEGLVGEGK 288
M KE G++ D IY +LI+G +G
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 289 VGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNP 348
+ A +L +++ G D+ YN+I+ GLC+ K +A KLF + L PD T+
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 349 LLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFL--VGKEERIMMALDVFEELKG 406
L+ ++G + N +L +M++ + + D+ + L GK I A +++ ++
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKR--IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 407 KGYSSVPI-YNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILE 465
K PI Y+IL+ AL G + +A ++ +M N++ + + I+ + SG+ +
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 466 ACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASG--PTEFKYAL 523
K+I VP +YN L G + + A LV+ + G P F Y
Sbjct: 604 GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK-MEEEQGGLVPDVFTYN- 661
Query: 524 TILH-VCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRER 582
+ILH CR + ++ VL +M + G P+ + +I+G L EA ++ + +R
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 118/570 (20%), Positives = 222/570 (38%), Gaps = 80/570 (14%)
Query: 112 SKLRRVTPDLVAEVL-KVENNPTLASKFFHWAGKQ-KGYKHNFASYNALAYCLSRNNLFR 169
+ L R+ P V EVL + N+ TL +F G +KH S +A+ + L R+
Sbjct: 71 NHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLS 130
Query: 170 AADQVPELMDSQGRIAEMLEILEKMRRNL--CKPDVFAYTAMIRVLAAERNLDACLRVWE 227
A M + ++ LEI+ + C + + +IR R L +
Sbjct: 131 DAQSCLLRMIRRSGVSR-LEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFT 189
Query: 228 EMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEG 287
++ + A LI L + G V +++E+ +G+ I+ +++ L +G
Sbjct: 190 LLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDG 249
Query: 288 KVGKACDLLKDLVDSGYRADLGIYN----------------------------------- 312
K+ K L + + G D+ YN
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309
Query: 313 SIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKL 372
++I GLC+ ++++A ++F ++ L+PD +T LL+ + G + K+ + M
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 373 K--------------FSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-------- 410
F+ + +L+K + +E ++ +V + +GY
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 411 --------------SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQC 456
V YN ++ L + + +A LF +M L +S + +I I
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489
Query: 457 HVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGP 516
H + G++ A E K+ E V YN L G K+G+ID A + D + P
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL-P 548
Query: 517 TEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVF 576
T Y++ + +C G + V +EM + P +IC+++I G C+ G +
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 577 TNLRERKLLTEA---NTIVYDEILIEHMKK 603
+ + + NT++Y + E+M K
Sbjct: 609 EKMISEGFVPDCISYNTLIYGFVREENMSK 638
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 5/204 (2%)
Query: 177 LMDSQGRIAEM---LEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDL 233
L+D G++ ++ EI M P +Y+ ++ L ++ +L RVW+EM
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 234 VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKAC 293
++ VM ++I G C+ G G +M G + D Y LI G V E + KA
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 294 DLLKDLVD--SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLV 351
L+K + + G D+ YNSI+ G CR Q +A + ++ + PD ST ++
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 352 CCAEMGRMDNFFKLLAQMEKLKFS 375
+ F++ +M + FS
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQRGFS 724
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Query: 181 QGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDL--VEADV 238
G ++ LEKM PD +Y +I E N+ + ++M+++ + DV
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 239 MAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKD 298
Y +++ G C+ ++ + R+M E G+ DR+ Y +I G V + + +A + +
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 299 LVDSGYRAD 307
++ G+ D
Sbjct: 718 MLQRGFSPD 726
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 196/449 (43%), Gaps = 44/449 (9%)
Query: 201 PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHEL 260
P+ ++ +I+ L R +D + V+ M + D Y TL+ GLCK R+ L
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 261 FREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCR 320
EM+ G IY VLI+GL +G + + L+ ++ G + YN++I GLC
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 321 VKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADL 380
+ DKA L E V P+ T L+ + R + +LL+ ME+ + + +
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 381 EKFFEFLVGKEERIMMALDVFEELKGKG-------YS----------------------- 410
+ KE + A+ ++ ++ KG YS
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 411 ------SVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDIL 464
+ Y+ LM + G ++A+ ++ +M N +S+ I G +
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 465 EACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRD--CLGNVASGPTEFKYA 522
EA +K++ + P AY+ + KGLC IG +DAA+ L + C S P Y
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 523 LTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMC-KHGTLEEAR----KVFT 577
+ + +C + + +++LN M GC P+ + C+ ++ + K + ++ R ++
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVV 604
Query: 578 NLRERKLLTEANTIVYDEILIEHMKKKTA 606
L +R+ ++ A TIV + +L +++ KT+
Sbjct: 605 RLLKRQRVSGACTIV-EVMLGKYLAPKTS 632
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 145 QKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVF 204
+KG K N Y+ L L R +G+ E EIL +M + C P+ +
Sbjct: 390 EKGCKPNIVVYSVLVDGLCR----------------EGKPNEAKEILNRMIASGCLPNAY 433
Query: 205 AYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREM 264
Y+++++ + ++VW+EM K + Y LI GLC GRV ++ +M
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 265 KENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLV---DSGYRADLGIYNSIIGGLCRV 321
GI D Y +I+GL G G + A L +++ + + D+ YN ++ GLC
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQ 553
Query: 322 KQFDKAYKLFEVTVQDDLAPDFSTVNPLL 350
K +A L + PD T N L
Sbjct: 554 KDISRAVDLLNSMLDRGCDPDVITCNTFL 582
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 155/335 (46%), Gaps = 16/335 (4%)
Query: 266 ENGILIDRAIYGVLIEGLVGEGKV-GKACDLLKDLVDSGYRADLGI--YNSIIGGLCRVK 322
EN ++I+R+ +++ G+ + KA DL +VD +R + +NS++ +
Sbjct: 106 ENRVIIERSF--IVVFRAYGKAHLPDKAVDLFHRMVDE-FRCKRSVKSFNSVLNVIINEG 162
Query: 323 QFDKAYKLFEVTVQDDL----APDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAA 378
+ + + ++ V ++ +P+ + N ++ ++ +D ++ M + K
Sbjct: 163 LYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK--CLP 220
Query: 379 DLEKFFEFLVG--KEERIMMALDVFEELKGKGYSSVP-IYNILMGALLEIGEVKKALYLF 435
D + + G KEERI A+ + +E++ +G S P IYN+L+ L + G++ + L
Sbjct: 221 DGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLV 280
Query: 436 GKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKI 495
M N ++++ I G + +A +++ +P+ Y L GL K
Sbjct: 281 DNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQ 340
Query: 496 GEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVI 555
A+ L+ + + Y++ I + + G+AE+ + + +M ++GC PN V+
Sbjct: 341 RRATDAVRLLSS-MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 556 CSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
S ++ G+C+ G EA+++ + L A T
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT 434
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 195/427 (45%), Gaps = 22/427 (5%)
Query: 183 RIAEMLEI-LEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEA---DV 238
R ++ ++I L +M C P+VF+Y +++ L E L + M D DV
Sbjct: 137 RTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDV 196
Query: 239 MAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKD 298
++Y T+I G K G + + + EM + GIL D Y +I L + KA ++L
Sbjct: 197 VSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNT 256
Query: 299 LVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGR 358
+V +G D YNSI+ G C Q +A + D + PD T + L+ + GR
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316
Query: 359 MDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMA-----LDVFEELKGKGYSSVP 413
K+ M K + ++ + L G + + LD+ ++ +
Sbjct: 317 CMEARKIFDSMTKR--GLKPEITTYGTLLQGYATKGALVEMHGLLDLM--VRNGIHPDHY 372
Query: 414 IYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKI 473
+++IL+ A + G+V +A+ +F KMR L N++++ I +SG + +A ++
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 474 IEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSG- 532
I+ P YN L GLC + + A L+ + L T F ++ H C+ G
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH-CKEGR 491
Query: 533 --EAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
E+EK+ E+ M + G PN + + +I+G C G ++EA K+ + + L + NT
Sbjct: 492 VIESEKLFEL---MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL--KPNT 546
Query: 591 IVYDEIL 597
+ Y ++
Sbjct: 547 VTYSTLI 553
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 202/473 (42%), Gaps = 56/473 (11%)
Query: 181 QGRIAEMLEILEKM---RRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEAD 237
+ R E LE+L M R PDV +YT +I E + D + EM + D
Sbjct: 171 ENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPD 230
Query: 238 VMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLK 297
V+ Y ++I LCK + + E+ M +NG++ D Y ++ G G+ +A LK
Sbjct: 231 VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK 290
Query: 298 DLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMG 357
+ G D+ Y+ ++ LC+ + +A K+F+ + L P+ +T LL A G
Sbjct: 291 KMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 350
Query: 358 RMDNFFKLLAQMEKLKFSVAADLEKFFEFLV---GKEERIMMALDVFEELKGKGYS-SVP 413
+ LL M ++ + D F L+ K+ ++ A+ VF +++ +G + +
Sbjct: 351 ALVEMHGLLDLM--VRNGIHPD-HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407
Query: 414 IYNILMGALLEIGEVKKALYLFGKM----------------------------------- 438
Y ++G L + G V+ A+ F +M
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467
Query: 439 --RGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIG 496
RG+ L N++ F+ I H + G ++E+ + ++ + P+V YN L G C G
Sbjct: 468 LDRGICL--NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525
Query: 497 EIDAAMMLVRDCLGNVASG--PTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEV 554
++D AM L+ G V+ G P Y+ I C+ E + + EM G P+ +
Sbjct: 526 KMDEAMKLLS---GMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 582
Query: 555 ICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEHMKKKTAD 607
+ I+ G+ + A++++ + E E +T Y+ IL K K D
Sbjct: 583 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELST--YNIILHGLCKNKLTD 633
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 192/419 (45%), Gaps = 16/419 (3%)
Query: 180 SQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVM 239
++G + EM +L+ M RN PD + ++ +I A + +D + V+ +M++ + + +
Sbjct: 348 TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407
Query: 240 AYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDL 299
Y +I LCK GRV F +M + G+ +Y LI GL K +A +L+ ++
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467
Query: 300 VDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRM 359
+D G + +NSII C+ + ++ KLFE+ V+ + P+ T N L+ G+M
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527
Query: 360 DNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYN 416
D KLL+ M + + + + + G K R+ AL +F+E++ G S + YN
Sbjct: 528 DEAMKLLSGM--VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585
Query: 417 ILMGALLEIGEVKKA--LYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKII 474
I++ L + A LY+ G +E+++ + + C + D +A + +
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD--DALQMFQNLC 643
Query: 475 EMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASG---PTEFKYALTILHVCRS 531
M +N + L K+G D A +D +S P + Y L ++
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEA----KDLFVAFSSNGLVPNYWTYRLMAENIIGQ 699
Query: 532 GEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT 590
G E++ ++ M GC + + + I+ + + G + A + + E+ EA+T
Sbjct: 700 GLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAST 758
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 190/437 (43%), Gaps = 43/437 (9%)
Query: 180 SQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVM 239
S G+ E + L+KMR + +PDV Y+ ++ L ++++ M K ++ ++
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 240 AYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDL 299
Y TL+ G G +V H L M NGI D ++ +LI +GKV +A + +
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 300 VDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPL---LVCCAEM 356
G + Y ++IG LC+ + + A FE + + L+P N L L C +
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 357 GRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYSSVPIYN 416
R EE I+ LD +G +++ +N
Sbjct: 458 ER-------------------------------AEELILEMLD-----RGICLNTI-FFN 480
Query: 417 ILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEM 476
++ + + G V ++ LF M + ++ N ++++ I + +G + EA + + ++ +
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540
Query: 477 SQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEK 536
P+ Y+ L G CKI ++ A++L ++ + + P Y + + + ++
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKE-MESSGVSPDIITYNIILQGLFQTRRTAA 599
Query: 537 IIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANT--IVYD 594
E+ +T+ G + I+ G+CK+ ++A ++F NL L EA T I+ D
Sbjct: 600 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 659
Query: 595 EILIEHMKKKTADLVLS 611
+L + DL ++
Sbjct: 660 ALLKVGRNDEAKDLFVA 676
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 12/262 (4%)
Query: 337 DDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERI 394
D++ PD T L+ CC GR+D F L + K F V D F L G ++R
Sbjct: 81 DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRV--DAIAFTPLLKGLCADKRT 138
Query: 395 MMALD-VFEELKGKG-YSSVPIYNILMGALLEIGEVKKALYLFGKM---RGLNLEVNSLS 449
A+D V + G +V YNIL+ L + ++AL L M RG + +S
Sbjct: 139 SDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 198
Query: 450 FSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCL 509
++ I + GD +A ++++++ +P V YN + LCK +D AM ++ +
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 510 GNVASGPTEFKYALTILH-VCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGT 568
N P Y +ILH C SG+ ++ I L +M +G P+ V S ++ +CK+G
Sbjct: 259 KN-GVMPDCMTYN-SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316
Query: 569 LEEARKVFTNLRERKLLTEANT 590
EARK+F ++ +R L E T
Sbjct: 317 CMEARKIFDSMTKRGLKPEITT 338
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 175/438 (39%), Gaps = 54/438 (12%)
Query: 232 DLVEADVMAYVTLIMGLCKGGRVVRGHE-------------------------------- 259
D V D+ Y LI C+ GR+ G
Sbjct: 81 DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 140
Query: 260 ----LFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD---SGYRADLGIYN 312
+ R M E G + + Y +L++GL E + +A +LL + D G D+ Y
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 313 SIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKL 372
++I G + DKAY + + + PD T N ++ + MD ++L M +
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTM--V 258
Query: 373 KFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVK 429
K V D + L G + A+ ++++ G V Y++LM L + G
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318
Query: 430 KALYLFGKM--RGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNC 487
+A +F M RGL E+ ++ +Q + G ++E + ++ P ++
Sbjct: 319 EARKIFDSMTKRGLKPEIT--TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376
Query: 488 LTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQE 547
L K G++D A MLV + P Y I +C+SG E + +M E
Sbjct: 377 LICAYAKQGKVDQA-MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 548 GCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEHMKKKTAD 607
G P ++ +++I G+C E A ++ + +R + NTI ++ I+ H K+
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL--NTIFFNSIIDSHCKEGR-- 491
Query: 608 LVLSGLKFFGLESKLKAK 625
V+ K F L ++ K
Sbjct: 492 -VIESEKLFELMVRIGVK 508
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 162/331 (48%), Gaps = 12/331 (3%)
Query: 260 LFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLC 319
+FRE E G+ + A Y ++I + G++ +A LL + GY D+ Y++++ G C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 320 RVKQFDKAYKLFEVTVQDDLAPD---FSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSV 376
R + DK +KL EV + L P+ + ++ LL ++ + F E ++ +
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS-----EMIRQGI 347
Query: 377 AADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALY 433
D + + G K I A F E+ + + V Y ++ +IG++ +A
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 434 LFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLC 493
LF +M LE +S++F+ I + ++G + +A HN +I+ P+V Y L GLC
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 494 KIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNE 553
K G++D+A L+ + + + P F Y + +C+SG E+ ++++ E G +
Sbjct: 468 KEGDLDSANELLHE-MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 554 VICSAIISGMCKHGTLEEARKVFTNLRERKL 584
V + ++ CK G +++A+++ + + L
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 185/426 (43%), Gaps = 8/426 (1%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAY 241
GRI E +L M PDV +Y+ ++ LD ++ E MK+ ++ + Y
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
++I LC+ ++ E F EM GIL D +Y LI+G G + A ++
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDN 361
D+ Y +II G C++ +A KLF L PD T L+ + G M +
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 362 FFKLLAQMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNIL 418
F++ M ++ + ++ + + G KE + A ++ E+ G ++ YN +
Sbjct: 440 AFRVHNHM--IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 419 MGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQ 478
+ L + G +++A+ L G+ L ++++++ + + +SG++ +A E +++
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 479 VPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKII 538
P++ +N L G C G ++ L+ L P + + C +
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 539 EVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILI 598
+ +M G P+ ++ G CK ++EA +F ++ + +T Y ++
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST--YSVLIK 674
Query: 599 EHMKKK 604
+K+K
Sbjct: 675 GFLKRK 680
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 204/486 (41%), Gaps = 27/486 (5%)
Query: 147 GYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQG----------------RIAEM--- 187
G N ASYN + + + + + A + LM+ +G R E+
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 188 LEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMG 247
+++E M+R KP+ + Y ++I +L L + EM + + D + Y TLI G
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 248 LCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRAD 307
CK G + + F EM I D Y +I G G + +A L ++ G D
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 308 LGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLA 367
+ +I G C+ A+++ +Q +P+ T L+ + G +D+ +LL
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 368 QMEKLKFSVAADLEKFFEFLVG--KEERIMMALDVFEELKGKGYSSVPI-YNILMGALLE 424
+M K+ + ++ + + G K I A+ + E + G ++ + Y LM A +
Sbjct: 481 EMWKI--GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 425 IGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAA 484
GE+ KA + +M G L+ ++F++ + G + + + N ++ P+
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 485 YNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEM 544
+N L K C + AA + +D + + GP Y + C++ ++ + EM
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKD-MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 545 TQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEHMKKK 604
+G + S +I G K EAR+VF +R L A+ ++D K K
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL--AADKEIFDFFSDTKYKGK 715
Query: 605 TADLVL 610
D ++
Sbjct: 716 RPDTIV 721
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/517 (20%), Positives = 210/517 (40%), Gaps = 52/517 (10%)
Query: 108 VTELSKLRRVTP---------------DLVAEVLKVENNPTLASKFFHWAGKQKGYKHNF 152
+T + KLRR P L+ ++K++ + L FF WA ++
Sbjct: 62 ITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRR------ 115
Query: 153 ASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRV 212
N + C+ + A +L +Q I+ E R L D F
Sbjct: 116 -DSNLESLCI----VIHLAVASKDLKVAQSLISSFWE-----RPKLNVTDSFV------- 158
Query: 213 LAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILID 272
+ D + +++ D DV V + GL + R V F +M G+++
Sbjct: 159 ----QFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRV-----FEKMLNYGLVLS 209
Query: 273 RAIYGVLIEGLVGEG-KVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLF 331
V + L + K A + ++ + G ++ YN +I +C++ + +A+ L
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 332 EVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKE 391
+ PD + + ++ G +D +KL+ M++ + + L+ +
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 329
Query: 392 ERIMMALDVFEELKGKG-YSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSF 450
++ A + F E+ +G +Y L+ + G+++ A F +M ++ + L++
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 451 SIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLG 510
+ I + GD++EA + +++ P + L G CK G + A V + +
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR-VHNHMI 448
Query: 511 NVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLE 570
P Y I +C+ G+ + E+L+EM + G PN ++I++G+CK G +E
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 571 EARKVFTNLRERKLLTEANTIVYDEILIEHMKKKTAD 607
EA K+ L A+T+ Y ++ + K D
Sbjct: 509 EAVKLVGEFEAAGL--NADTVTYTTLMDAYCKSGEMD 543
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 178/395 (45%), Gaps = 37/395 (9%)
Query: 182 GRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAY 241
G I + ++L ++ P+V YT +I + ++ ++ EM K + A+ Y
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236
Query: 242 VTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVD 301
LI GL K G +G E++ +M+E+G+ + Y ++ L +G+ A + ++ +
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 302 SGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDN 361
G ++ YN++IGGLCR + ++A K+ + D + P+ T N L+ +G++
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL-- 354
Query: 362 FFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMG 420
GK AL + +LK +G S S+ YNIL+
Sbjct: 355 ---------------------------GK------ALSLCRDLKSRGLSPSLVTYNILVS 381
Query: 421 ALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVP 480
G+ A + +M ++ + ++++I I S ++ +A + + E+ VP
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441
Query: 481 SVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEV 540
V Y+ L G C G+++ A L + + P E Y IL C+ G + + +++
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE-PNEVIYNTMILGYCKEGSSYRALKL 500
Query: 541 LNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKV 575
L EM ++ PN +I +CK +EA ++
Sbjct: 501 LKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 189/411 (45%), Gaps = 8/411 (1%)
Query: 201 PDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHEL 260
P + ++ + + + + E K +V DV ++ LI G C+ G + + +L
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVV-LDVYSFGILIKGCCEAGEIEKSFDL 185
Query: 261 FREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCR 320
E+ E G + IY LI+G +G++ KA DL ++ G A+ Y +I GL +
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 321 VKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADL 380
+ ++++E +D + P+ T N ++ + GR + F++ +M + V+ ++
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER--GVSCNI 303
Query: 381 EKFFEFLVG--KEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGK 437
+ + G +E ++ A V +++K G + ++ YN L+ +G++ KAL L
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 438 MRGLNLEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGE 497
++ L + ++++I + GD A + ++ E PS Y L +
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 498 IDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICS 557
++ A+ L R + + P Y++ I C G+ + + M ++ C PNEVI +
Sbjct: 424 MEKAIQL-RLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 558 AIISGMCKHGTLEEARKVFTNLRERKLLTEANTIVY-DEILIEHMKKKTAD 607
+I G CK G+ A K+ + E++L + Y E+L + K K A+
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 190/412 (46%), Gaps = 9/412 (2%)
Query: 206 YTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFREMK 265
Y +I ++L+ + + EM + + L+ + + F E K
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 266 ENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQFD 325
+++D +G+LI+G G++ K+ DLL +L + G+ ++ IY ++I G C+ + +
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 326 KAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKLLAQMEKLKFSVAADLEKFFE 385
KA LF + L + T L+ + G F++ +M++ V +L +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED--GVFPNLYTYNC 273
Query: 386 FL--VGKEERIMMALDVFEELKGKGYS-SVPIYNILMGALLEIGEVKKALYLFGKMRGLN 442
+ + K+ R A VF+E++ +G S ++ YN L+G L ++ +A + +M+
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333
Query: 443 LEVNSLSFSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAM 502
+ N ++++ I G + +A + PS+ YN L G C+ G+ A
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 503 MLVRDCLGNVASGPTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISG 562
+V++ + P++ Y + I RS EK I++ M + G P+ S +I G
Sbjct: 394 KMVKE-MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452
Query: 563 MCKHGTLEEARKVFTNLRERKLLTEANTIVYDEILIEHMKKKTADLVLSGLK 614
C G + EA ++F ++ E+ E N ++Y+ +++ + K+ ++ L LK
Sbjct: 453 FCIKGQMNEASRLFKSMVEKN--CEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 144 KQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEILEKMRRNLCKPDV 203
K +G + +YN L R A ++ + M+ +G KP
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG----------------IKPSK 408
Query: 204 FAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGHELFRE 263
YT +I A N++ +++ M++ + DV Y LI G C G++ LF+
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 264 MKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGLCRVKQ 323
M E + IY +I G EG +A LLK++ + ++ Y +I LC+ ++
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 324 FDKAYKLFEVTVQDDLAPDFSTVN 347
+A +L E + + P S ++
Sbjct: 529 SKEAERLVEKMIDSGIDPSTSILS 552
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 198/469 (42%), Gaps = 59/469 (12%)
Query: 118 TPDLVAEVLKVENNPTLASKFFHWAGK--QKGYKHNFASYNAL--AYCLSRNNLFRAADQ 173
T +L+ + P LAS F GK + G++ + ++ +L +CL
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFL---GKMMKLGFEPDIVTFTSLINGFCLGN--------- 156
Query: 174 VPELMDSQGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDL 233
R+ E + ++ +M KPDV YT +I L +++ L ++++M+
Sbjct: 157 ---------RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG 207
Query: 234 VEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKAC 293
+ DV+ Y +L+ GLC GR L R M + I D + LI+ V EGK A
Sbjct: 208 IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAE 267
Query: 294 DLLKDLVDSGYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCC 353
+L +++ ++ Y S+I G C D+A ++F + PD L+
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 354 AEMGRMDNFFKLLAQMEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGY-SSV 412
+ ++D+ K+ +M + + G+ + +A +VF + +G ++
Sbjct: 328 CKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Query: 413 PIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLSFSIAIQCHVESGDILEACECHNK 472
YN+L+ L G+VKKAL +F M+ ++
Sbjct: 388 RTYNVLLHCLCYNGKVKKALMIFEDMQKREMD---------------------------- 419
Query: 473 IIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCLGNVASGPTEFKYALTILHVCRSG 532
P++ YN L GLC G+++ A+M+ D + Y + I +C++G
Sbjct: 420 ----GVAPNIWTYNVLLHGLCYNGKLEKALMVFED-MRKREMDIGIITYTIIIQGMCKAG 474
Query: 533 EAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHGTLEEARKVFTNLRE 581
+ + + + + +G PN V + +ISG+ + G EA +F ++E
Sbjct: 475 KVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 187/450 (41%), Gaps = 40/450 (8%)
Query: 186 EMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLI 245
E L++ M + P + +T ++ V+A + D + + + ++ V D+ L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 246 MGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYR 305
C+ + +M + G D + LI G ++ +A ++ +V+ G +
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 306 ADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNFFKL 365
D+ +Y +II LC+ + A LF+ + PD L+ GR + L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 366 LAQMEKLK-----FSVAADLEKFF---EFLVGKE---ERIMMAL---------------- 398
L M K K + A ++ F +FL +E E I M++
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 399 --------DVFEELKGKG-YSSVPIYNILMGALLEIGEVKKALYLFGKMRGLNLEVNSLS 449
+F ++ KG + V Y L+ + +V A+ +F +M L N+++
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 450 FSIAIQCHVESGDILEACECHNKIIEMSQVPSVAAYNCLTKGLCKIGEIDAAMMLVRDCL 509
++ IQ + G A E + ++ P++ YN L LC G++ A+M+ D
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 510 GNVASG--PTEFKYALTILHVCRSGEAEKIIEVLNEMTQEGCPPNEVICSAIISGMCKHG 567
G P + Y + + +C +G+ EK + V +M + + + II GMCK G
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAG 474
Query: 568 TLEEARKVFTNLRERKLLTEANTIVYDEIL 597
++ A +F +L + + + N + Y ++
Sbjct: 475 KVKNAVNLFCSLPSKGV--KPNVVTYTTMI 502
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 189 EILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKK---DLVEADVMAYVTLI 245
E+ M P++ Y ++ L + L ++E+M+K D V ++ Y L+
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 246 MGLCKGGRVVRGHELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYR 305
GLC G++ + +F +M++ + I Y ++I+G+ GKV A +L L G +
Sbjct: 433 HGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK 492
Query: 306 ADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLA 340
++ Y ++I GL R +A+ LF +D ++
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 57/177 (32%)
Query: 132 PTLASKFF-HWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGRIAEMLEI 190
P +A + F H +G N +YN L +CL N G++ + L I
Sbjct: 368 PNVAQEVFSHMV--SRGVPPNIRTYNVLLHCLCYN----------------GKVKKALMI 409
Query: 191 LEKMRR---NLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKK---------------- 231
E M++ + P+++ Y ++ L L+ L V+E+M+K
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG 469
Query: 232 -------------------DLVEADVMAYVTLIMGLCKGGRVVRGHELFREMKENGI 269
V+ +V+ Y T+I GL + G H LFR+MKE+G+
Sbjct: 470 MCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 234,322,661
Number of Sequences: 539616
Number of extensions: 10027862
Number of successful extensions: 34605
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 164
Number of HSP's that attempted gapping in prelim test: 26850
Number of HSP's gapped (non-prelim): 2822
length of query: 632
length of database: 191,569,459
effective HSP length: 124
effective length of query: 508
effective length of database: 124,657,075
effective search space: 63325794100
effective search space used: 63325794100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)