BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006745
(632 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZIX8|KDM3A_CHICK Lysine-specific demethylase 3A OS=Gallus gallus GN=KDM3A PE=2 SV=1
Length = 1325
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 91/142 (64%), Gaps = 4/142 (2%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEY 533
GA+W I+ +D K++++LKK E + PV PIHDQ +YL + +L QEY
Sbjct: 1175 GALWHIYAAKDTEKIREFLKKVAEEQGQEN--PVDH--DPIHDQSWYLDRSLRKRLHQEY 1230
Query: 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPN 593
G++ W +Q LG+ VF+PAG PHQV NL SCIK A DFVSPE+V C LT+EFR L
Sbjct: 1231 GVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHT 1290
Query: 594 HRAKEDKLEVKKMILYAVSQAV 615
H EDKL+VK +I +AV AV
Sbjct: 1291 HTNHEDKLQVKNVIYHAVKDAV 1312
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCLDWCEGE 238
F+ W +G+PV+VS V W P + Q + +D ++ E
Sbjct: 969 FRECWKQGQPVMVSGVHHKLNADLWRPESFRKEFGQ------------QEVDLVNCRTNE 1016
Query: 239 V----NIHQFFKGYTD--GRF-DKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFK 291
+ + F+ G+ D R +E P +LKLKDWPP F + +P + + +P
Sbjct: 1017 IITGATVGDFWDGFEDISSRLRTEEGEPMVLKLKDWPPGEDFRDMMPSRFDDLMKNIPLP 1076
Query: 292 EYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLT 351
EYT G LN+A++LP ++PD+GPK Y AYG+ R T LH D+SDA NV+
Sbjct: 1077 EYTRR-GGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMV 1135
Query: 352 HT 353
+
Sbjct: 1136 YV 1137
>sp|Q6PCM1|KDM3A_MOUSE Lysine-specific demethylase 3A OS=Mus musculus GN=Kdm3a PE=1 SV=1
Length = 1323
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 90/142 (63%), Gaps = 4/142 (2%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEY 533
GA+W I+ +D K++++LKK E + P PIHDQ +YL + +L QEY
Sbjct: 1173 GALWHIYAAKDTEKIREFLKKVSEEQGQDN--PADH--DPIHDQSWYLDRSLRKRLYQEY 1228
Query: 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPN 593
G++ W +Q LG+ VF+PAG PHQV NL SCIK A DFVSPE+V C LT+EFR L
Sbjct: 1229 GVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQT 1288
Query: 594 HRAKEDKLEVKKMILYAVSQAV 615
H EDKL+VK +I +AV AV
Sbjct: 1289 HTNHEDKLQVKNVIYHAVKDAV 1310
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 21/183 (11%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCLDWCEGE 238
F+ W +G+PV+VS V W P R + +D ++ E
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNTELWKP------------ESFRKEFGEQEVDLVNCRTNE 1013
Query: 239 V----NIHQFFKGYTDG----RFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPF 290
+ + F+ G+ D + DKE P +LKLKDWPP F + +P + + +P
Sbjct: 1014 IITGATVGDFWDGFEDVPNRLKNDKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPL 1073
Query: 291 KEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVL 350
EYT G LN+A++LP ++PD+GPK Y AYG+ R T LH D+SDA NV+
Sbjct: 1074 PEYTRR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVM 1132
Query: 351 THT 353
+
Sbjct: 1133 VYV 1135
>sp|Q7LBC6|KDM3B_HUMAN Lysine-specific demethylase 3B OS=Homo sapiens GN=KDM3B PE=1 SV=2
Length = 1761
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 92/145 (63%), Gaps = 4/145 (2%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEY 533
GA+W I+ +D K+++ L+K E + P PIHDQ +YL + +L +EY
Sbjct: 1611 GALWHIYAAKDAEKIRELLRKVGEEQGQEN--PPDH--DPIHDQSWYLDQTLRKRLYEEY 1666
Query: 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPN 593
G++ W +Q LG+AVF+PAG PHQV NL SCIK A DFVSPE+V C RLT+EFR L
Sbjct: 1667 GVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNT 1726
Query: 594 HRAKEDKLEVKKMILYAVSQAVKDI 618
H EDKL+VK +I +AV AV +
Sbjct: 1727 HTNHEDKLQVKNIIYHAVKDAVGTL 1751
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 96/204 (47%), Gaps = 38/204 (18%)
Query: 163 LYNPAAKDIRHGDLKHFQWHWAKGEPVIVSNVLENALGLSWDP-------------MVMW 209
L++P+ K+ + K F+ W +G+PV+VS V + W P +V
Sbjct: 1393 LHDPSNKN----NWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQDVDLVNC 1448
Query: 210 RACRQISNTKHRLYLDVKAIDCLDWCEGEVNIHQFFKGYTDGRFDKE-SWPQILKLKDWP 268
R C IS+ K R + D I C R E P +LKLKDWP
Sbjct: 1449 RNCAIISDVKVRDFWDGFEIIC-------------------KRLRSEDGQPMVLKLKDWP 1489
Query: 269 PSNLFEERLPRHNVEFLGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQ 328
P F + +P + + LP EYT G LN+A++LP ++PD+GPK Y AYG+
Sbjct: 1490 PGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLIT 1548
Query: 329 ELGRADSVTKLHCDMSDAVNVLTH 352
R T LH D+SDAVNV+ +
Sbjct: 1549 AEDRRVGTTNLHLDVSDAVNVMVY 1572
>sp|Q9Y4C1|KDM3A_HUMAN Lysine-specific demethylase 3A OS=Homo sapiens GN=KDM3A PE=1 SV=4
Length = 1321
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 90/142 (63%), Gaps = 4/142 (2%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEY 533
GA+W I+ +D K++++LKK E + P PIHDQ +YL + +L QEY
Sbjct: 1171 GALWHIYAAKDTEKIREFLKKVSEEQGQEN--PADH--DPIHDQSWYLDRSLRKRLHQEY 1226
Query: 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPN 593
G++ W +Q LG+ VF+PAG PHQV NL SCIK A DFVSPE+V C LT+EFR L
Sbjct: 1227 GVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQT 1286
Query: 594 HRAKEDKLEVKKMILYAVSQAV 615
H EDKL+VK +I +AV AV
Sbjct: 1287 HTNHEDKLQVKNVIYHAVKDAV 1308
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCLDWCEGE 238
F+ W +G+PV+VS V W P R + +D ++ E
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNSELWKP------------ESFRKEFGEQEVDLVNCRTNE 1013
Query: 239 V----NIHQFFKGYTD--GRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKE 292
+ + F+ G+ D R E P +LKLKDWPP F + +P + + +P E
Sbjct: 1014 IITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPE 1073
Query: 293 YTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTH 352
YT G LN+A++LP ++PD+GPK Y AYG+ R T LH D+SDA NV+ +
Sbjct: 1074 YTRR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1132
Query: 353 T 353
Sbjct: 1133 V 1133
>sp|Q6IRB8|KD3AA_XENLA Lysine-specific demethylase 3A-A OS=Xenopus laevis GN=kdm3a-a PE=2
SV=1
Length = 1331
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 92/142 (64%), Gaps = 4/142 (2%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEY 533
GA+W IF +D K++ +LKK E H + P PIHDQ +YL + + +L QE+
Sbjct: 1181 GALWHIFAAKDTEKIRQFLKKVAEEQGHEN--PPDH--DPIHDQSWYLDNTLRKRLLQEH 1236
Query: 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPN 593
G++ W +Q LG+AVF+PAG PHQV NL SCIK A DFVSPE+V C LT+EFR L
Sbjct: 1237 GVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHT 1296
Query: 594 HRAKEDKLEVKKMILYAVSQAV 615
H EDKL+VK +I +AV ++
Sbjct: 1297 HTNHEDKLQVKNVIYHAVKDSI 1318
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCLDWCEGE 238
F+ W +G+PVIVS + N W P + R+ + ++ + D +
Sbjct: 975 FRECWKQGQPVIVSGIHNNLNSELWRP----ESFRREFGDQEADLVNCRTNDIIT----G 1026
Query: 239 VNIHQFFKGYTD--GRF-DKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKEYTH 295
+ F++G+ D R + + +LKLKDWPP F + + + + +P EYT
Sbjct: 1027 ATVGDFWEGFEDISARLKNDKGEAMVLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR 1086
Query: 296 PCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTHT 353
G LN+A +LP ++PD+GPK Y AYG+ R T LH D+SDA NV+ +
Sbjct: 1087 R-EGKLNLAARLPAYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDATNVMVYV 1143
>sp|Q63679|KDM3A_RAT Lysine-specific demethylase 3A OS=Rattus norvegicus GN=Kdm3a PE=2
SV=1
Length = 1214
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 90/142 (63%), Gaps = 4/142 (2%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEY 533
GA+W I+ +D K++++LKK E + P PIHDQ +YL + +L QEY
Sbjct: 1057 GALWHIYAAKDTEKIREFLKKVSEEQGQEN--PADH--DPIHDQSWYLDRSLRKRLYQEY 1112
Query: 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPN 593
G++ W +Q LG+ VF+PAG PHQV NL SCIK A DFVSPE+V C LT+EFR L
Sbjct: 1113 GVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRHLSQT 1172
Query: 594 HRAKEDKLEVKKMILYAVSQAV 615
H EDKL+VK +I +AV AV
Sbjct: 1173 HTNHEDKLQVKNVIYHAVKDAV 1194
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 88/183 (48%), Gaps = 21/183 (11%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCLDWCEGE 238
F+ W +G+PV+VS V W P R + +D ++ E
Sbjct: 850 FRECWKQGQPVMVSGVHHKLNTELWKP------------ESFRKEFGEQEVDLVNCRTNE 897
Query: 239 V----NIHQFFKGYTDG----RFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPF 290
+ + F+ G+ D + +KE P +LKLKDWPP F + +P + + +P
Sbjct: 898 IITGATVGDFWDGFEDVPNRLKNEKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPL 957
Query: 291 KEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVL 350
EYT G LN+A++LP ++PD+GPK Y AYG+ R T LH D+SDA NV+
Sbjct: 958 PEYTRR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVM 1016
Query: 351 THT 353
+
Sbjct: 1017 VYV 1019
>sp|Q6ZPY7|KDM3B_MOUSE Lysine-specific demethylase 3B OS=Mus musculus GN=Kdm3b PE=1 SV=2
Length = 1562
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 92/145 (63%), Gaps = 4/145 (2%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEY 533
GA+W I+ +D K+++ L+K E + P PIHDQ +YL + +L +EY
Sbjct: 1412 GALWHIYAAKDAEKIRELLRKVGEEQGQEN--PPDH--DPIHDQSWYLDQILRKRLFEEY 1467
Query: 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPN 593
G++ W +Q LG+AVF+PAG PHQV NL SCIK A DFVSPE+V C RLT+EFR L
Sbjct: 1468 GVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNT 1527
Query: 594 HRAKEDKLEVKKMILYAVSQAVKDI 618
H EDKL+VK +I +AV AV +
Sbjct: 1528 HTNHEDKLQVKNIIYHAVKDAVGTL 1552
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 96/205 (46%), Gaps = 38/205 (18%)
Query: 163 LYNPAAKDIRHGDLKHFQWHWAKGEPVIVSNVLENALGLSWDP-------------MVMW 209
L++P+ K+ + K F+ W +G+PV+VS V + W P +V
Sbjct: 1194 LHDPSNKN----NWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQDVDLVNC 1249
Query: 210 RACRQISNTKHRLYLDVKAIDCLDWCEGEVNIHQFFKGYTDGRFDKE-SWPQILKLKDWP 268
R C IS+ K R + D I C R E P +LKLKDWP
Sbjct: 1250 RNCAIISDVKVRDFWDGFEIIC-------------------KRLRSEDGQPMVLKLKDWP 1290
Query: 269 PSNLFEERLPRHNVEFLGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQ 328
P F + +P + + LP EYT G LN+A++LP ++PD+GPK Y AYG+
Sbjct: 1291 PGEDFRDMMPTRFEDLMENLPLPEYTKR-DGRLNLASRLPSYFVRPDLGPKMYNAYGLIT 1349
Query: 329 ELGRADSVTKLHCDMSDAVNVLTHT 353
R T LH D+SDAVNV+ +
Sbjct: 1350 AEDRRVGTTNLHLDVSDAVNVMVYV 1374
>sp|Q5HZN1|KD3AB_XENLA Lysine-specific demethylase 3A-B OS=Xenopus laevis GN=kdm3a-b PE=2
SV=1
Length = 1334
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 92/142 (64%), Gaps = 4/142 (2%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEY 533
GA+W I+ +D K++ +LKK E H + P PIHDQ +YL + + +L QE+
Sbjct: 1184 GALWHIYAAKDTEKIRQFLKKVAEEEGHEN--PPDH--DPIHDQSWYLDNILRKRLLQEH 1239
Query: 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPN 593
G++ W +Q LG+AVF+PAG PHQV NL SCIK A DFVSPE+V C LT+EFR L
Sbjct: 1240 GVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFCLTQEFRYLSHT 1299
Query: 594 HRAKEDKLEVKKMILYAVSQAV 615
H EDKL+VK +I +AV ++
Sbjct: 1300 HTNHEDKLQVKNVIYHAVKDSI 1321
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKA--IDCL--DW 234
F+ W +G+PV+VS V N W P + R + D +A ++C D
Sbjct: 978 FRECWKQGQPVMVSGVHNNLNSELWRP-----------ESFRREFGDQEADLVNCRTNDI 1026
Query: 235 CEGEVNIHQFFKGYTD--GRFDKESW-PQILKLKDWPPSNLFEERLPRHNVEFLGCLPFK 291
G + F+ G+ D GR ++ +LKLKDWPP F + + + + +P
Sbjct: 1027 ITG-ATVGDFWDGFEDIPGRLKNDTGESMVLKLKDWPPGEDFRDTMLSRFEDLMNNIPLP 1085
Query: 292 EYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLT 351
EYT G LN+A +LP ++PD+GPK Y AYG+ R T LH D+SDA NV+
Sbjct: 1086 EYTRR-EGKLNLAARLPTYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMV 1144
Query: 352 HT 353
+
Sbjct: 1145 YV 1146
>sp|Q69ZK6|JHD2C_MOUSE Probable JmjC domain-containing histone demethylation protein 2C
OS=Mus musculus GN=Jmjd1c PE=1 SV=3
Length = 2350
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 92/145 (63%), Gaps = 5/145 (3%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEY 533
GA+W I+ +D+ K++++L+K +E + + P PI DQ +Y++ + + +L +EY
Sbjct: 2198 GALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHD---PIRDQSWYVNRKLRQRLLEEY 2253
Query: 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPN 593
G+ T IQ LG+A+ +PAG HQV+N SC++ DFVSPE++ Q LT+E RLL
Sbjct: 2254 GVRACTLIQFLGDAIVLPAGTLHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLL-KE 2312
Query: 594 HRAKEDKLEVKKMILYAVSQAVKDI 618
+DKL+VK ++ +AV + V+ +
Sbjct: 2313 EINYDDKLQVKNILYHAVKEMVRAL 2337
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 15/180 (8%)
Query: 177 KHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRA-CRQISNTKHRLYLDVKAIDCLDWC 235
K F+ W +G+P +VS V + +S +W+A + H+ L ++C D
Sbjct: 1990 KLFKECWKQGQPAVVSGV-HKKMNIS-----LWKAESISLDFGDHQADL----LNCKDSI 2039
Query: 236 EGEVNIHQFFKGY---TDGRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKE 292
N+ +F+ G+ + + +K +LKLKD P F+ +P +FL CLP E
Sbjct: 2040 VSNANVKEFWDGFEEVSKRQKNKGGETVVLKLKDCPSGEDFKAMMPTRYEDFLRCLPLPE 2099
Query: 293 YTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTH 352
Y +P G N+A+ LP ++PD+GP+ AYGVA T LH + SD VNVL +
Sbjct: 2100 YCNP-EGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEASDVVNVLVY 2158
>sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C
OS=Homo sapiens GN=JMJD1C PE=1 SV=2
Length = 2540
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 92/145 (63%), Gaps = 5/145 (3%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEY 533
GA+W I+ +D+ K++++L+K +E + + P PI DQ +Y++ + + +L +EY
Sbjct: 2388 GALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHD---PIRDQSWYVNKKLRQRLLEEY 2443
Query: 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPN 593
G+ T IQ LG+A+ +PAG HQV+N SCI+ DFVSPE++ + LT+E RLL
Sbjct: 2444 GVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLL-KE 2502
Query: 594 HRAKEDKLEVKKMILYAVSQAVKDI 618
+DKL+VK ++ +AV + V+ +
Sbjct: 2503 EINYDDKLQVKNILYHAVKEMVRAL 2527
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 177 KHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRA-CRQISNTKHRLYLDVKAIDCLDWC 235
K F+ W +G+P +VS V + +S +W+A + H+ L ++C D
Sbjct: 2180 KLFKECWKQGQPAVVSGV-HKKMNIS-----LWKAESISLDFGDHQADL----LNCKDSI 2229
Query: 236 EGEVNIHQFFKGY---TDGRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKE 292
N+ +F+ G+ + + +K +LKLKDWP F+ +P + L LP E
Sbjct: 2230 ISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPE 2289
Query: 293 YTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTH 352
Y +P G N+A+ LP ++PD+GP+ AYGV T LH ++SD VN+L +
Sbjct: 2290 YCNP-EGKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVY 2348
>sp|P97609|HAIR_RAT Protein hairless OS=Rattus norvegicus GN=Hr PE=2 SV=2
Length = 1181
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 476 VWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGI 535
VW +FR QD ++ R F + C + P YL S + +L++E+G+
Sbjct: 1045 VWHVFRAQDAQRI--------RRFLQMVCPAGAGTLEPGAPGSCYLDSGLRRRLREEWGV 1096
Query: 536 EPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHR 595
WT +Q GEAV VPAG PHQV+ L S I F+SPE + +L + LPP+HR
Sbjct: 1097 SCWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLCHQGASLPPDHR 1156
Query: 596 AKEDKLEVKKMILYAVSQAVKDISD 620
+++ + + AV AV + +
Sbjct: 1157 MLYAQMD--RAVFQAVKVAVGTLQE 1179
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 34/202 (16%)
Query: 172 RHGDLKHFQWHWAKGEPVIVSNVLENALGLS-WDPMVMWRACRQISNTKHRLYLDVKAID 230
+HG + FQ HW +G+PV+VS + + L LS W + Q+ ++D
Sbjct: 848 KHG-FRLFQEHWRQGQPVLVSGI-QKTLRLSLWGMEALGTLGGQVQTLTALGPPQPTSLD 905
Query: 231 CLDWCEGEVNIHQFFKGYTDGRFDKESWPQI----LKLKDWPPSNLFEERLPRHNVEFLG 286
F+KG++ E+ P++ + L P + E R VE L
Sbjct: 906 ST----------AFWKGFSH----PEARPKLDEGSVLLLHRPLGDKDESR-----VENLA 946
Query: 287 C-LPFKEYTHPCA--GALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDM 343
LP EY CA G LN+A+ LP + P+ + AYGV G + L ++
Sbjct: 947 SSLPLPEY---CAHQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSHRGHLGT-KNLCVEV 1002
Query: 344 SDAVNVLTHTTDVKLKPEHLAK 365
SD +++L H + +L P + A+
Sbjct: 1003 SDLISILVH-AEAQLPPWYRAQ 1023
>sp|Q61645|HAIR_MOUSE Protein hairless OS=Mus musculus GN=Hr PE=2 SV=2
Length = 1182
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 476 VWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGI 535
VW +FR QD ++ R F + C + P YL + + +L++E+G+
Sbjct: 1046 VWHVFRAQDAQRI--------RRFLQMVCPAGAGTLEPGAPGSCYLDAGLRRRLREEWGV 1097
Query: 536 EPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHR 595
WT +Q GEAV VPAG PHQV+ L S I F+SPE + +L + LPP+HR
Sbjct: 1098 SCWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLYHQGASLPPDHR 1157
Query: 596 AKEDKLEVKKMILYAVSQAVKDISD 620
+++ + + AV AV + +
Sbjct: 1158 MLYAQMD--RAVFQAVKAAVGALQE 1180
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 78/190 (41%), Gaps = 23/190 (12%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLS-WDPMVMWRACRQISNTKHRLYLDVKAIDCLDWCEG 237
FQ HW +G+PV+VS + + L LS W + Q+ +D + EG
Sbjct: 855 FQEHWRQGQPVLVSGI-QKTLRLSLWGMEALGTLGGQVQTLTALGPPQPTNLDSTAFWEG 913
Query: 238 EVNIHQFFKGYTDGRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKEYTHPC 297
F T + D+ S +L L ++ LP EY C
Sbjct: 914 ------FSHPETRPKLDEGS---VLLLH-----RTLGDKDASRVQNLASSLPLPEY---C 956
Query: 298 A--GALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTHTTD 355
A G LN+A+ LP + P+ + AYGV G + L ++SD +++L H +
Sbjct: 957 AHQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSHRGHLGT-KNLCVEVSDLISILVH-AE 1014
Query: 356 VKLKPEHLAK 365
+L P + A+
Sbjct: 1015 AQLPPWYRAQ 1024
>sp|O43593|HAIR_HUMAN Protein hairless OS=Homo sapiens GN=HR PE=1 SV=5
Length = 1189
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 476 VWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGI 535
VW +FR QD ++ R F + C + P YL + + +L++E+G+
Sbjct: 1053 VWHVFRAQDAQRI--------RRFLQMVCPAGAGALEPGAPGSCYLDAGLRRRLREEWGV 1104
Query: 536 EPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHR 595
WT +Q GEAV VPAG PHQV+ L S + F+SPE + +L + LPP+
Sbjct: 1105 SCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPETSALSAQLCHQGPSLPPDCH 1164
Query: 596 AKEDKLEVKKMILYAVSQAVK 616
+++ +AV QAVK
Sbjct: 1165 LLYAQMD------WAVFQAVK 1179
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCLDWCE-G 237
FQ HW +G+PV+VS + G W + L V+A+ L +
Sbjct: 862 FQEHWRQGQPVLVSGIQRTLQGNLWG-----------TEALGALGGQVQALSPLGPPQPS 910
Query: 238 EVNIHQFFKGYTDGRFDKESWPQILKLKDWPPSNLFEERLPRHN---VEFLGC-LPFKEY 293
+ F++G+ SWP++ D L L + VE L LP EY
Sbjct: 911 SLGSTTFWEGF--------SWPELRPKSDEGSVLLLHRALGDEDTSRVENLAASLPLPEY 962
Query: 294 THPCA--GALNIATKLPKK-SLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVL 350
CA G LN+A+ LP +L+P + P+ + AYGV+ G + L +++D V++L
Sbjct: 963 ---CALHGKLNLASYLPPGLALRP-LEPQLWAAYGVSPHRGHLGT-KNLCVEVADLVSIL 1017
Query: 351 THTTDVKLKPEHLAKIEKL 369
H D L H A+ + L
Sbjct: 1018 VH-ADTPLPAWHRAQKDFL 1035
>sp|Q9VJ97|JMJD4_DROME JmjC domain-containing protein 4 homolog OS=Drosophila melanogaster
GN=CG7200 PE=2 SV=1
Length = 425
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 528 KLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVS 578
K+ E+ + +T Q+ EAVFVP+G HQV NL I ++ + N+S
Sbjct: 256 KMLDEHNVRYYTINQRANEAVFVPSGWFHQVWNLTDTISVNHNWFNGCNIS 306
>sp|Q6Q4H1|JMJD6_HYDVU Bifunctional arginine demethylase and lysyl-hydroxylase PSR
OS=Hydra vulgaris GN=PSR PE=1 SV=1
Length = 385
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 531 QEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576
+EY P IQ GE VFVP G H V NL + +F SP N
Sbjct: 250 KEYA--PLEIIQHPGETVFVPGGWWHVVLNLDQTVAVTQNFSSPTN 293
>sp|Q5R6G2|JMJD6_PONAB Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
OS=Pongo abelii GN=JMJD6 PE=2 SV=1
Length = 403
Score = 37.0 bits (84), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576
+P +QK GE VFVP G H V NL + I +F S N
Sbjct: 252 FKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTN 293
>sp|Q6NYC1|JMJD6_HUMAN Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
OS=Homo sapiens GN=JMJD6 PE=1 SV=1
Length = 403
Score = 37.0 bits (84), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576
+P +QK GE VFVP G H V NL + I +F S N
Sbjct: 252 FKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTN 293
>sp|Q6AYK2|JMJD6_RAT Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
OS=Rattus norvegicus GN=Jmjd6 PE=2 SV=2
Length = 403
Score = 37.0 bits (84), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576
+P +QK GE VFVP G H V NL + I +F S N
Sbjct: 252 FKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTN 293
>sp|Q9ERI5|JMJD6_MOUSE Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
OS=Mus musculus GN=Jmjd6 PE=1 SV=2
Length = 403
Score = 37.0 bits (84), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576
+P +QK GE VFVP G H V NL + I +F S N
Sbjct: 252 FKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTN 293
>sp|Q58DS6|JMJD6_BOVIN Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
OS=Bos taurus GN=JMJD6 PE=2 SV=1
Length = 403
Score = 37.0 bits (84), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576
+P +QK GE VFVP G H V NL + I +F S N
Sbjct: 252 FKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTN 293
>sp|Q6PFM0|JMJD6_DANRE Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
OS=Danio rerio GN=jmjd6 PE=2 SV=2
Length = 403
Score = 37.0 bits (84), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENV 577
P +Q+ GE VFVP G H V NL + I +F S N
Sbjct: 252 FRPLEILQRPGETVFVPGGWWHVVLNLDTTIAVTQNFASTTNF 294
>sp|Q6GND3|JMD6A_XENLA Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-A
OS=Xenopus laevis GN=jmjd6-a PE=2 SV=1
Length = 403
Score = 36.6 bits (83), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576
+P +QK GE VFVP G H V NL + I +F S N
Sbjct: 252 FKPLEILQKPGETVFVPGGWWHVVLNLDTAIAVTQNFASCSN 293
>sp|Q9H9V9|JMJD4_HUMAN JmjC domain-containing protein 4 OS=Homo sapiens GN=JMJD4 PE=2 SV=2
Length = 463
Score = 36.6 bits (83), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 537 PWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEE 586
P Q+ GE VFVP+G HQV NL I ++V+ N++ R ++
Sbjct: 296 PLEITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQ 345
>sp|Q5ZMK5|JMJD6_CHICK Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
OS=Gallus gallus GN=JMJD6 PE=2 SV=1
Length = 414
Score = 35.8 bits (81), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576
+P +QK GE VFVP G H V NL + I +F S N
Sbjct: 252 FKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASCTN 293
>sp|Q5ZHV5|JMJD4_CHICK JmjC domain-containing protein 4 OS=Gallus gallus GN=JMJD4 PE=2
SV=1
Length = 425
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 537 PWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVS 578
P +Q+ GE VF+P+G HQV NL+ I ++V+ NV+
Sbjct: 249 PVEIVQEAGEIVFIPSGWHHQVYNLEDTISINHNWVNGCNVA 290
>sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1 OS=Arabidopsis thaliana
GN=EZA1 PE=2 SV=1
Length = 856
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 35 VDSTPETDSKFDTTPG-----TDSKVGSNPEKDSKGREKPISDWKANENGSILCPSIELG 89
V+S P D D+T G TD+KV + E D+K +PI D ++ GS +C
Sbjct: 414 VNSVPSLDQALDSTKGDQGGTTDNKVNRDSEADAKEVGEPIPDNSVHDGGSSICQPHHGS 473
Query: 90 GCGNVL 95
G G ++
Sbjct: 474 GNGAII 479
>sp|Q7ZX37|JMD6B_XENLA Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-B
OS=Xenopus laevis GN=jmjd6-b PE=2 SV=1
Length = 403
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576
+P +QK GE VFVP G H V N + I +F S N
Sbjct: 252 FKPLEILQKPGETVFVPGGWWHVVLNFDTAIAVTQNFASCSN 293
>sp|Q08BY5|JMJD4_DANRE JmjC domain-containing protein 4 OS=Danio rerio GN=jmjd4 PE=2 SV=1
Length = 422
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 532 EYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENV 577
E +P IQ+ GE +FVP+G HQV NL+ I ++++ N+
Sbjct: 242 EEACQPLEIIQEAGEIIFVPSGWHHQVYNLEDTISINHNWLNGCNL 287
>sp|A1W2Y5|CAAL_ACISJ Carboxylate-amine ligase Ajs_0357 OS=Acidovorax sp. (strain JS42)
GN=Ajs_0357 PE=3 SV=1
Length = 374
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 419 VPQDSQICDSMLNDPIPVQRAISEEASEAIADLGKSRE----SGEPSNIP-----ENEFE 469
VP + M N I + + +SE + L + R+ S + NI + F+
Sbjct: 44 VPLPGSVVPEMTNSMIEISTGVCHSSSEVLGQLTQIRDALVKSADKLNIAVVGGGTHPFQ 103
Query: 470 SADGGAVWDIFRRQDISKLQDYLKKHFREF-RHIHC-CP 506
++D R Q++S+L YL K F F +H+H CP
Sbjct: 104 QWHERRIYDKPRFQELSQLYGYLSKQFTIFGQHVHIGCP 142
>sp|B9MBR0|CAAL_ACIET Carboxylate-amine ligase Dtpsy_0346 OS=Acidovorax ebreus (strain
TPSY) GN=Dtpsy_0346 PE=3 SV=1
Length = 374
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 419 VPQDSQICDSMLNDPIPVQRAISEEASEAIADLGKSRE----SGEPSNIP-----ENEFE 469
VP + M N I + + +SE + L + R+ S + NI + F+
Sbjct: 44 VPLPGSVVPEMTNSMIEISTGVCHSSSEVLGQLTQIRDALVKSADKLNIAVVGGGTHPFQ 103
Query: 470 SADGGAVWDIFRRQDISKLQDYLKKHFREF-RHIHC-CP 506
++D R Q++S+L YL K F F +H+H CP
Sbjct: 104 QWHERRIYDKPRFQELSQLYGYLSKQFTIFGQHVHIGCP 142
>sp|B5FF87|RHLB_VIBFM ATP-dependent RNA helicase RhlB OS=Vibrio fischeri (strain MJ11)
GN=rhlB PE=3 SV=1
Length = 432
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 487 KLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPW 538
++Q+ +H +E H+ P Q+ H I +++FY S++HK L Q E W
Sbjct: 204 RVQELAFEHMQEPEHVVVEPEQKTGHRIKEELFYPSNDHKMALLQTLIEEEW 255
>sp|Q5E8U5|RHLB_VIBF1 ATP-dependent RNA helicase RhlB OS=Vibrio fischeri (strain ATCC
700601 / ES114) GN=rhlB PE=3 SV=2
Length = 432
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 487 KLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPW 538
++Q+ +H +E H+ P Q+ H I +++FY S++HK L Q E W
Sbjct: 204 RVQELAFEHMQEPEHVVVEPEQKTGHRIKEELFYPSNDHKMALLQTLIEEEW 255
>sp|O81645|VILI3_ARATH Villin-3 OS=Arabidopsis thaliana GN=VLN3 PE=1 SV=2
Length = 965
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 545 GEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPN 593
G +F+ G QV K+ I+AA DFV+ EN + R+T + P+
Sbjct: 287 GSEIFIWVGRVTQVEERKTAIQAAEDFVASENRPKATRITRVIQGYEPH 335
>sp|A1TJA3|CAAL_ACIAC Carboxylate-amine ligase Aave_0434 OS=Acidovorax citrulli (strain
AAC00-1) GN=Aave_0434 PE=3 SV=1
Length = 374
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 420 PQDSQICDSMLNDPIPVQRAISEEASEAIADLGKSRE----SGEPSNIP-----ENEFES 470
P + M N I V I SE + L + R+ S + NI + F+
Sbjct: 45 PLPGSVVPEMTNSMIEVSTGICHSGSEVLGQLTQIRDALVRSADKLNIAVVGGGTHPFQQ 104
Query: 471 ADGGAVWDIFRRQDISKLQDYLKKHFREF-RHIHC-CP 506
++D R Q++S+L YL K F F +H+H CP
Sbjct: 105 WHERRIYDKPRFQELSQLYGYLSKQFTIFGQHVHIGCP 142
>sp|Q09771|ATF31_SCHPO Transcription factor atf31 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=atf31 PE=3 SV=1
Length = 209
Score = 33.9 bits (76), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 58/141 (41%), Gaps = 19/141 (13%)
Query: 431 NDPIPVQRAISEEASEAIADLGKSRESGEPSNIPENEFESADGGAVWDIFRRQDISKL-- 488
NDP ++R+ +E SE A S S N P E + D G ++ SKL
Sbjct: 71 NDPYNIRRSDFDELSEYTASKSPSIISEASHNSPSRELD--DSGD-------ENTSKLTG 121
Query: 489 --QDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGE 546
Q LK R+ ++ + + DQV Y +SE+K L+ + I KL
Sbjct: 122 TKQSMLKARNRQAAQKCRIKKKKYLQTLQDQVNYYTSENKELLQSANDLREE--IIKLRT 179
Query: 547 AVFVPAGCPHQVRNLKSCIKA 567
VF CP K+C KA
Sbjct: 180 LVFAHRDCPVS----KACSKA 196
>sp|B6EPA4|RHLB_ALISL ATP-dependent RNA helicase RhlB OS=Aliivibrio salmonicida (strain
LFI1238) GN=rhlB PE=3 SV=1
Length = 434
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 487 KLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPW 538
++Q+ +H +E H+ P Q+ H I +++FY S++HK L Q E W
Sbjct: 204 RVQELAFEHMQEPEHVVVEPDQKTGHLITEELFYPSNDHKMALLQTLIEEEW 255
>sp|C3LQR1|RHLB_VIBCM ATP-dependent RNA helicase RhlB OS=Vibrio cholerae serotype O1
(strain M66-2) GN=rhlB PE=3 SV=1
Length = 438
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 487 KLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPW 538
++Q+ +H H+ P Q+ H I +++FY S+EHK L Q E W
Sbjct: 204 RVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTLIEEEW 255
>sp|Q9KV52|RHLB_VIBCH ATP-dependent RNA helicase RhlB OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=rhlB PE=3
SV=1
Length = 438
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 487 KLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPW 538
++Q+ +H H+ P Q+ H I +++FY S+EHK L Q E W
Sbjct: 204 RVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTLIEEEW 255
>sp|A5F3R4|RHLB_VIBC3 ATP-dependent RNA helicase RhlB OS=Vibrio cholerae serotype O1
(strain ATCC 39541 / Ogawa 395 / O395) GN=rhlB PE=3 SV=1
Length = 438
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 487 KLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPW 538
++Q+ +H H+ P Q+ H I +++FY S+EHK L Q E W
Sbjct: 204 RVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTLIEEEW 255
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,165,387
Number of Sequences: 539616
Number of extensions: 11011205
Number of successful extensions: 30224
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 30134
Number of HSP's gapped (non-prelim): 66
length of query: 632
length of database: 191,569,459
effective HSP length: 124
effective length of query: 508
effective length of database: 124,657,075
effective search space: 63325794100
effective search space used: 63325794100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)