Query 006745
Match_columns 632
No_of_seqs 148 out of 201
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 07:49:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006745.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006745hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ypd_A Probable JMJC domain-co 100.0 3E-137 1E-141 1084.1 15.1 353 174-623 22-377 (392)
2 4gjz_A Lysine-specific demethy 99.2 1.6E-12 5.4E-17 124.8 2.9 136 175-352 10-152 (235)
3 3k2o_A Bifunctional arginine d 99.1 2.1E-10 7.2E-15 120.3 12.2 53 534-586 252-304 (336)
4 2yu1_A JMJC domain-containing 99.0 1E-08 3.4E-13 111.6 16.6 84 534-619 262-345 (451)
5 3k3o_A PHF8, PHD finger protei 98.9 9.8E-09 3.4E-13 109.2 14.8 83 535-620 214-297 (371)
6 3kv5_D JMJC domain-containing 98.9 6.7E-09 2.3E-13 113.9 11.8 83 535-619 333-415 (488)
7 3kv4_A PHD finger protein 8; e 98.9 4E-09 1.4E-13 114.6 9.8 81 535-620 298-381 (447)
8 3al5_A HTYW5, JMJC domain-cont 98.9 2.2E-09 7.7E-14 111.8 6.9 42 535-576 237-278 (338)
9 3kv9_A JMJC domain-containing 98.8 3.5E-08 1.2E-12 105.8 14.0 84 534-619 241-324 (397)
10 3pua_A GRC5, PHD finger protei 98.8 4.1E-08 1.4E-12 105.1 12.8 83 534-619 240-323 (392)
11 3d8c_A Hypoxia-inducible facto 98.7 1.3E-09 4.3E-14 114.4 0.4 41 534-574 257-298 (349)
12 2xxz_A Lysine-specific demethy 97.6 3.7E-05 1.3E-09 80.9 5.0 86 473-577 233-318 (332)
13 3pur_A Lysine-specific demethy 97.5 3.2E-05 1.1E-09 85.5 3.4 51 535-585 363-413 (528)
14 3avr_A Lysine-specific demethy 97.4 8.5E-05 2.9E-09 82.3 5.3 88 473-579 292-379 (531)
15 4ask_A Lysine-specific demethy 96.8 0.00094 3.2E-08 73.5 5.0 87 472-577 266-352 (510)
16 3dxt_A JMJC domain-containing 96.0 0.0056 1.9E-07 64.9 5.4 93 475-579 210-303 (354)
17 1vrb_A Putative asparaginyl hy 95.4 0.017 5.8E-07 60.5 6.1 80 535-619 215-304 (342)
18 3opt_A DNA damage-responsive t 95.0 0.023 7.8E-07 60.7 5.7 92 475-578 253-345 (373)
19 2ox0_A JMJC domain-containing 94.7 0.03 1E-06 59.9 5.8 94 474-579 227-321 (381)
20 2opk_A Hypothetical protein; p 92.7 0.032 1.1E-06 48.7 1.3 24 540-563 75-98 (112)
21 3lag_A Uncharacterized protein 92.2 0.047 1.6E-06 46.9 1.6 23 540-562 61-83 (98)
22 3fjs_A Uncharacterized protein 91.9 0.044 1.5E-06 47.7 1.1 58 511-575 53-110 (114)
23 2pfw_A Cupin 2, conserved barr 91.7 0.054 1.9E-06 46.1 1.4 59 509-575 49-107 (116)
24 2q30_A Uncharacterized protein 91.3 0.041 1.4E-06 46.0 0.2 39 534-574 69-108 (110)
25 2fqp_A Hypothetical protein BP 91.3 0.093 3.2E-06 44.0 2.4 26 538-563 59-84 (97)
26 3ht1_A REMF protein; cupin fol 91.2 0.065 2.2E-06 47.1 1.4 41 535-575 76-116 (145)
27 3h8u_A Uncharacterized conserv 90.8 0.063 2.2E-06 46.5 1.0 38 537-574 78-115 (125)
28 2ozj_A Cupin 2, conserved barr 90.3 0.084 2.9E-06 45.0 1.3 46 515-565 58-103 (114)
29 2xlg_A SLL1785 protein, CUCA; 90.2 0.092 3.2E-06 52.5 1.7 77 509-588 58-163 (239)
30 1v70_A Probable antibiotics sy 90.0 0.068 2.3E-06 43.7 0.4 27 537-563 66-92 (105)
31 2b8m_A Hypothetical protein MJ 90.0 0.12 4E-06 44.3 2.0 39 537-575 64-105 (117)
32 4e2g_A Cupin 2 conserved barre 89.9 0.14 4.9E-06 44.2 2.4 59 510-575 57-115 (126)
33 3d82_A Cupin 2, conserved barr 89.5 0.1 3.5E-06 43.0 1.1 28 538-565 68-95 (102)
34 1o5u_A Novel thermotoga mariti 89.4 0.11 3.9E-06 45.0 1.4 30 537-566 67-96 (101)
35 1yhf_A Hypothetical protein SP 89.1 0.12 4.3E-06 43.7 1.5 50 510-565 56-105 (115)
36 2i45_A Hypothetical protein; n 88.3 0.18 6E-06 42.6 1.8 27 538-564 67-93 (107)
37 2gu9_A Tetracenomycin polyketi 88.2 0.14 4.8E-06 42.7 1.1 41 535-575 59-99 (113)
38 3kgz_A Cupin 2 conserved barre 88.1 0.16 5.5E-06 47.2 1.6 60 510-575 60-119 (156)
39 2ozi_A Hypothetical protein RP 88.1 0.15 5E-06 44.0 1.2 23 541-563 62-84 (98)
40 3ibm_A Cupin 2, conserved barr 87.8 0.15 5.1E-06 47.7 1.1 61 509-575 71-132 (167)
41 1juh_A Quercetin 2,3-dioxygena 87.4 0.17 5.8E-06 52.7 1.4 40 539-579 292-332 (350)
42 3h7j_A Bacilysin biosynthesis 87.1 0.17 5.7E-06 49.7 1.1 60 510-575 162-221 (243)
43 1lr5_A Auxin binding protein 1 86.5 0.22 7.4E-06 45.5 1.4 25 538-562 88-112 (163)
44 3lwc_A Uncharacterized protein 86.4 0.31 1E-05 43.3 2.3 26 536-561 75-100 (119)
45 2oa2_A BH2720 protein; 1017534 86.2 0.36 1.2E-05 43.5 2.7 25 539-563 89-113 (148)
46 1y9q_A Transcriptional regulat 86.0 0.16 5.4E-06 47.5 0.2 55 516-576 127-181 (192)
47 3cew_A Uncharacterized cupin p 85.4 0.27 9.3E-06 42.6 1.4 29 534-562 62-90 (125)
48 4axo_A EUTQ, ethanolamine util 85.2 0.25 8.5E-06 46.4 1.2 59 512-577 81-139 (151)
49 3l2h_A Putative sugar phosphat 84.6 0.29 1E-05 44.5 1.3 40 535-574 83-123 (162)
50 3rns_A Cupin 2 conserved barre 84.4 0.3 1E-05 47.5 1.4 49 510-564 169-218 (227)
51 2o8q_A Hypothetical protein; c 84.3 0.45 1.5E-05 41.6 2.3 61 510-576 59-120 (134)
52 3jzv_A Uncharacterized protein 83.7 0.52 1.8E-05 44.2 2.7 48 510-563 69-116 (166)
53 1vj2_A Novel manganese-contain 83.7 0.27 9.1E-06 43.1 0.6 48 510-563 64-111 (126)
54 4i4a_A Similar to unknown prot 83.0 0.61 2.1E-05 40.2 2.6 57 533-593 67-125 (128)
55 1x82_A Glucose-6-phosphate iso 82.7 0.37 1.3E-05 45.9 1.2 40 536-575 117-156 (190)
56 4h7l_A Uncharacterized protein 82.4 0.19 6.6E-06 47.7 -0.9 47 509-560 60-108 (157)
57 1qwr_A Mannose-6-phosphate iso 80.9 0.54 1.8E-05 48.8 1.7 20 540-559 160-179 (319)
58 1y3t_A Hypothetical protein YX 80.7 0.42 1.4E-05 48.0 0.8 51 533-584 252-302 (337)
59 2bnm_A Epoxidase; oxidoreducta 80.2 0.41 1.4E-05 44.7 0.5 45 511-561 137-185 (198)
60 1zx5_A Mannosephosphate isomer 80.1 0.59 2E-05 48.1 1.7 19 540-558 160-178 (300)
61 1o4t_A Putative oxalate decarb 80.0 0.58 2E-05 41.5 1.4 31 533-563 91-121 (133)
62 1rc6_A Hypothetical protein YL 79.9 0.54 1.8E-05 46.5 1.3 48 511-563 196-243 (261)
63 3i7d_A Sugar phosphate isomera 78.9 0.65 2.2E-05 43.0 1.4 58 512-574 62-121 (163)
64 3rns_A Cupin 2 conserved barre 78.8 0.53 1.8E-05 45.7 0.9 54 509-568 52-105 (227)
65 1fi2_A Oxalate oxidase, germin 78.5 0.8 2.7E-05 43.7 2.0 39 538-576 119-157 (201)
66 2f4p_A Hypothetical protein TM 77.8 0.74 2.5E-05 41.7 1.5 35 540-574 89-123 (147)
67 3bcw_A Uncharacterized protein 77.8 0.78 2.7E-05 41.1 1.6 30 539-568 88-117 (123)
68 1sef_A Conserved hypothetical 77.1 0.81 2.8E-05 45.7 1.6 31 533-563 216-246 (274)
69 2vpv_A Protein MIF2, MIF2P; nu 76.6 1.2 4.1E-05 42.4 2.5 29 535-563 125-153 (166)
70 3h7j_A Bacilysin biosynthesis 75.9 0.78 2.7E-05 44.9 1.1 48 510-563 50-98 (243)
71 2wfp_A Mannose-6-phosphate iso 75.8 0.93 3.2E-05 48.5 1.7 17 541-557 243-259 (394)
72 4e2q_A Ureidoglycine aminohydr 75.4 0.96 3.3E-05 46.1 1.6 29 533-561 220-248 (266)
73 2pyt_A Ethanolamine utilizatio 75.4 0.86 2.9E-05 41.2 1.2 35 535-569 90-124 (133)
74 1pmi_A PMI, phosphomannose iso 74.0 1.1 3.7E-05 48.7 1.7 33 525-557 244-285 (440)
75 1y3t_A Hypothetical protein YX 73.9 0.87 3E-05 45.7 0.9 50 533-583 80-129 (337)
76 1juh_A Quercetin 2,3-dioxygena 73.2 0.8 2.7E-05 47.7 0.4 71 510-586 66-141 (350)
77 2xdv_A MYC-induced nuclear ant 72.5 1.8 6.1E-05 47.0 2.9 30 533-562 194-223 (442)
78 1dgw_A Canavalin; duplicated s 71.1 1.9 6.3E-05 40.6 2.4 27 537-563 82-108 (178)
79 1sq4_A GLXB, glyoxylate-induce 70.6 1.9 6.5E-05 43.5 2.5 42 516-562 91-132 (278)
80 3nw4_A Gentisate 1,2-dioxygena 69.0 2.2 7.5E-05 45.4 2.6 27 535-561 139-165 (368)
81 2vqa_A SLL1358 protein, MNCA; 68.7 1.8 6.1E-05 44.3 1.8 52 539-591 279-330 (361)
82 3bu7_A Gentisate 1,2-dioxygena 68.2 2.2 7.6E-05 45.7 2.5 29 534-562 328-356 (394)
83 2d40_A Z3393, putative gentisa 68.0 1.6 5.4E-05 45.7 1.2 40 535-574 136-175 (354)
84 4diq_A Lysine-specific demethy 67.7 2 6.7E-05 47.5 2.0 41 533-573 223-265 (489)
85 1sfn_A Conserved hypothetical 67.5 1.8 6E-05 42.7 1.4 31 534-564 82-112 (246)
86 1sfn_A Conserved hypothetical 65.5 2.2 7.4E-05 42.0 1.6 31 532-562 198-228 (246)
87 1rc6_A Hypothetical protein YL 63.6 3.2 0.00011 40.9 2.4 30 534-563 95-124 (261)
88 1j58_A YVRK protein; cupin, de 63.5 3.3 0.00011 42.9 2.6 27 537-563 300-326 (385)
89 1sef_A Conserved hypothetical 62.9 2.6 8.8E-05 42.0 1.6 31 533-563 97-127 (274)
90 1zrr_A E-2/E-2' protein; nicke 59.9 4 0.00014 39.1 2.3 37 539-575 123-159 (179)
91 4b29_A Dimethylsulfoniopropion 59.8 2.8 9.5E-05 41.8 1.2 46 510-561 148-194 (217)
92 3es1_A Cupin 2, conserved barr 58.6 2.7 9.1E-05 40.1 0.8 36 538-574 118-153 (172)
93 2d40_A Z3393, putative gentisa 58.6 4.5 0.00015 42.2 2.6 27 535-561 303-329 (354)
94 2vqa_A SLL1358 protein, MNCA; 55.1 5 0.00017 40.9 2.2 25 538-562 96-120 (361)
95 2arc_A ARAC, arabinose operon 54.6 6.2 0.00021 34.6 2.5 30 533-562 51-80 (164)
96 3bu7_A Gentisate 1,2-dioxygena 54.4 5.5 0.00019 42.7 2.5 27 534-560 158-184 (394)
97 4e2q_A Ureidoglycine aminohydr 53.7 4.8 0.00016 41.0 1.8 24 539-562 110-133 (266)
98 2d5f_A Glycinin A3B4 subunit; 53.2 3.4 0.00012 45.4 0.7 35 541-575 116-150 (493)
99 1sq4_A GLXB, glyoxylate-induce 53.0 5.7 0.0002 39.9 2.2 31 532-562 224-254 (278)
100 1vr3_A Acireductone dioxygenas 51.1 5.7 0.0002 38.6 1.8 37 539-575 128-164 (191)
101 2e9q_A 11S globulin subunit be 50.0 3.6 0.00012 44.9 0.2 36 541-576 130-165 (459)
102 3c3v_A Arachin ARAH3 isoform; 46.7 4.7 0.00016 44.7 0.5 35 542-576 130-164 (510)
103 2y0o_A Probable D-lyxose ketol 44.3 6.8 0.00023 37.7 1.1 39 539-579 120-158 (175)
104 1fxz_A Glycinin G1; proglycini 43.7 5.5 0.00019 43.6 0.4 30 539-568 114-143 (476)
105 3cjx_A Protein of unknown func 41.9 6.7 0.00023 37.0 0.6 33 543-575 85-126 (165)
106 1j58_A YVRK protein; cupin, de 41.0 11 0.00039 38.8 2.2 48 510-563 95-147 (385)
107 1vq8_T 50S ribosomal protein L 39.8 9 0.00031 34.9 1.1 41 512-554 15-55 (120)
108 1fxz_A Glycinin G1; proglycini 38.3 9 0.00031 41.9 1.0 102 471-574 317-419 (476)
109 1uij_A Beta subunit of beta co 37.7 14 0.00047 39.6 2.3 46 511-561 65-114 (416)
110 3j21_U 50S ribosomal protein L 36.8 11 0.00037 34.4 1.2 39 513-553 19-57 (121)
111 2ea7_A 7S globulin-1; beta bar 33.0 12 0.00041 40.4 0.9 26 537-562 102-127 (434)
112 2cav_A Protein (canavalin); vi 33.0 12 0.00042 40.4 1.0 55 538-592 128-211 (445)
113 2o1q_A Putative acetyl/propion 32.2 13 0.00044 33.8 0.8 55 508-566 58-113 (145)
114 3c3v_A Arachin ARAH3 isoform; 31.9 12 0.00042 41.4 0.8 102 471-574 351-453 (510)
115 3nw4_A Gentisate 1,2-dioxygena 30.9 20 0.00068 38.1 2.2 31 535-565 314-344 (368)
116 2d5f_A Glycinin A3B4 subunit; 26.2 13 0.00045 40.9 -0.3 118 471-592 346-464 (493)
117 3kgl_A Cruciferin; 11S SEED gl 24.3 25 0.00085 38.6 1.5 20 543-562 150-169 (466)
118 3qac_A 11S globulin SEED stora 21.3 25 0.00085 38.5 0.8 34 543-576 135-168 (465)
119 3ksc_A LEGA class, prolegumin; 20.8 29 0.00098 38.3 1.1 21 543-563 115-135 (496)
No 1
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.5e-137 Score=1084.07 Aligned_cols=353 Identities=32% Similarity=0.552 Sum_probs=272.4
Q ss_pred CChHHHHHHHhcCCCEEEEeccccccCCCCChhHHHHHHHHhhccccccccceeeeecCCCceeecchhhhhccccCCcc
Q 006745 174 GDLKHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCLDWCEGEVNIHQFFKGYTDGRF 253 (632)
Q Consensus 174 ~~l~hFQ~hW~kGePVIVr~Vl~~~s~lsWeP~~mwra~~e~~~~~~~~~~~vkaiDCld~~evei~i~qFf~Gy~~gr~ 253 (632)
+|+.|||+||++|||||||||++++++++|+|++|||+|++ ..+++|||++|++++|++++||+||++++.
T Consensus 22 ~n~~~Fq~hW~~GePViVs~V~~~~~~~~W~Pe~~~~~~gd---------~~~~lidC~~~~~~~i~v~~Ff~Gf~~~~~ 92 (392)
T 2ypd_A 22 SNWKLFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGD---------HQADLLNCKDSIISNANVKEFWDGFEEVSK 92 (392)
T ss_dssp THHHHHHHHHTTTCCEEECCHHHHSCGGGGSHHHHHHHHTT---------SCCCCEETTTCCBCSCCHHHHHHTSSBGGG
T ss_pred ccHHHHHHHHhCCCcEEEechhhhCcCCccCHHHHHHHhcC---------ceeeeeeCCCCccccCcHHHHhhhcccccc
Confidence 89999999999999999999999999999999999999975 237789999999999999999999999753
Q ss_pred ---CCCCCcceeecCCCCChhhHHHhcchhhHHhhhCCCCcCccCCCCCcccccccCCCCCCCCCCCCceeecccccccc
Q 006745 254 ---DKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQEL 330 (632)
Q Consensus 254 ---~~~~wp~mLKLKDWPps~~F~e~LP~h~~eFi~aLP~~EYT~pr~G~LNLAakLP~~~lkPDLGPK~YIAYG~~eEl 330 (632)
+++|||+|||||||||+++|+++||+||+|||++|||||||||+ |+||||++||+++++||||||||||||+++++
T Consensus 93 r~~~~~g~p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlpEYt~p~-G~LNLAs~LP~~~~kPDLGPK~YiAYG~~~~~ 171 (392)
T 2ypd_A 93 RQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAK 171 (392)
T ss_dssp C------CCCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSHHHHSTT-CTTCCTTTSCGGGCC---CCEEEEECCSTTTT
T ss_pred CCcCCCCCcceeeecCCCChHHHHHHhHHHHHHHHHcCCchHhhCCC-ccchHHHhCCCCCCCCCCCcchhhhcCcchhc
Confidence 57999999999999999999999999999999999999999985 99999999999999999999999999999999
Q ss_pred CCCCCcccccccccchhhhhhccccccCChhHHHHHHHHHHHHHhhhhhhhhcCCCCCcccccCCCCCCccccccCCCCC
Q 006745 331 GRADSVTKLHCDMSDAVNVLTHTTDVKLKPEHLAKIEKLKQQHKAQDQMEFFGCSQFSDENSHANSSAIPVKNEQCGGKP 410 (632)
Q Consensus 331 GrGDSvTkLH~DmSDAVNIL~htaev~~~~~~~~~i~kLk~~~~~qd~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 410 (632)
|+|+|||||||||||||||||||++++. .+...+.+.++ ++.++++.+.+.
T Consensus 172 ~~~~gvT~LH~DmsDaVNiL~h~~~~~~-~~~~~~~~~l~-~~~~~~~d~~~~--------------------------- 222 (392)
T 2ypd_A 172 DHDIGTTNLHIEVSDVVNILVYVGIAKG-NGILSKAGILK-KFEEEDLDDILR--------------------------- 222 (392)
T ss_dssp CTTCCSEEEEECSSEEEEEEEEEECCBC-TTCCCHHHHHH-HHHTSCCCHHHH---------------------------
T ss_pred ccCCCcceeeeehhhhhhhhheecccCc-cccchhhhhhh-hhhhccccHHHh---------------------------
Confidence 9999999999999999999999987653 22222223232 232222111100
Q ss_pred CCCCCCcccCCCcccccCCCCCCccccchhhhhHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCcceeeeecCCChHHHHH
Q 006745 411 DDGDGVGVVPQDSQICDSMLNDPIPVQRAISEEASEAIADLGKSRESGEPSNIPENEFESADGGAVWDIFRRQDISKLQD 490 (632)
Q Consensus 411 ~~~~~v~~~~~~~~~c~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GAlWDIFrreDv~KLre 490 (632)
+. + .+..+.+||+||||||||++|||+
T Consensus 223 ------------------------------------~r--~---------------~~~~~~~GAlW~Ifr~~D~~klr~ 249 (392)
T 2ypd_A 223 ------------------------------------KR--L---------------KDSSEIPGALWHIYAGKDVDKIRE 249 (392)
T ss_dssp ------------------------------------HH--H---------------TCTTCCEEEEEEEECGGGHHHHHH
T ss_pred ------------------------------------hh--c---------------cCCCCCCCceeeeeCHhhHHHHHH
Confidence 00 0 012367999999999999999999
Q ss_pred HHHHHHHhhcccccCCCCcccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccchhhhhhhc
Q 006745 491 YLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALD 570 (632)
Q Consensus 491 yL~kh~~Efrh~~~~pv~~v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlD 570 (632)
||++|++|| |.++.++.||||||+||||++||++|+|||||+||||+|++|||||||||||||||||+||||||+|
T Consensus 250 ~L~~~~~e~----~~~~~~~~dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~d 325 (392)
T 2ypd_A 250 FLQKISKEQ----GLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTED 325 (392)
T ss_dssp HHHHHHHHH----C------CCHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEE
T ss_pred HHHHHHHhh----CCCccCCCCcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhh
Confidence 999999998 4567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccchHHHHHHHHHhhcCCCccCCccchhhHhHHHHHHHHHHHHHhCCCCC
Q 006745 571 FVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAVKDISDPGA 623 (632)
Q Consensus 571 FVSPEnV~ec~rLteEfR~Lp~~H~akEDKLeVkkm~l~A~~~Av~~l~~~~~ 623 (632)
|||||||++|++||+|||+|| +|++||||||||||+||||++||++|+...+
T Consensus 326 f~spe~~~~c~~lt~E~R~l~-~~~~~edkLqvk~m~~~av~~av~~l~~~~~ 377 (392)
T 2ypd_A 326 FVSPEHLVESFHLTQELRLLK-EEINYDDKLQVKNILYHAVKEMVRALKIHED 377 (392)
T ss_dssp ECCGGGHHHHHHHHHHC------------------------------------
T ss_pred hcChhhHHHHHHHHHHHhhcc-hhhhhHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999999999999999997 6999999999999999999999999997643
No 2
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=99.25 E-value=1.6e-12 Score=124.82 Aligned_cols=136 Identities=16% Similarity=0.270 Sum_probs=75.7
Q ss_pred ChHHH-HHHHhcCCCEEEEeccccccC-CCCChhHHHHHHHHhhccccccccceeeeecC-----CCceeecchhhhhcc
Q 006745 175 DLKHF-QWHWAKGEPVIVSNVLENALG-LSWDPMVMWRACRQISNTKHRLYLDVKAIDCL-----DWCEGEVNIHQFFKG 247 (632)
Q Consensus 175 ~l~hF-Q~hW~kGePVIVr~Vl~~~s~-lsWeP~~mwra~~e~~~~~~~~~~~vkaiDCl-----d~~evei~i~qFf~G 247 (632)
..+.| +++|.+++|||++|+.+.-.. -.|++.++-+.+++ ..|.+-.|. ++....+++.+|...
T Consensus 10 S~~eF~~~y~~~~~Pvvi~g~~~~wpa~~~w~~~yL~~~~g~---------~~v~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (235)
T 4gjz_A 10 SLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGC---------RTVPVEVGSRYTDEEWSQTLMTVNEFISK 80 (235)
T ss_dssp CHHHHHHHTTTTTCCEEEESSSTTSHHHHHCSHHHHHHHHTT---------SEEEEEEC-------CEEEEEEHHHHHHH
T ss_pred CHHHHHHHHhcCCCcEEEeCCCcCCcccccCCHHHHHHHcCC---------CeEEEEecCcccCCccceeeccHHHHHHH
Confidence 55677 568899999999998764322 25888888666654 223333332 234456788888877
Q ss_pred ccCCccCCCCCcceeecCCCCChhhHHHhcchhhHHhhhCCCCcCccCCCCCcccccccCCCCCCCCCCCCceeeccccc
Q 006745 248 YTDGRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVA 327 (632)
Q Consensus 248 y~~gr~~~~~wp~mLKLKDWPps~~F~e~LP~h~~eFi~aLP~~EYT~pr~G~LNLAakLP~~~lkPDLGPK~YIAYG~~ 327 (632)
+...... ..+-+.++. +.+.+ .++..-+.++.|.....+.. .+..+-+|
T Consensus 81 ~~~~~~~-----~~~y~~~~~----~~~~~----~~l~~d~~~p~~~~~~~~~~------------~~~~~~~w------ 129 (235)
T 4gjz_A 81 YIVNEPR-----DVGYLAQHQ----LFDQI----PELKQDISIPDYCSLGDGEE------------EEITINAW------ 129 (235)
T ss_dssp HTSSCCS-----SCEEEEEEC----HHHHC----HHHHTTCCCCGGGGGSSSCG------------GGCEEEEE------
T ss_pred HhhcCCc-----ccceeehhh----hhhhh----HHHHHhhcCCcccccccccc------------CccceEEE------
Confidence 7643221 223333332 33333 44555555666653211111 11122233
Q ss_pred cccCCCCCcccccccccchhhhhhc
Q 006745 328 QELGRADSVTKLHCDMSDAVNVLTH 352 (632)
Q Consensus 328 eElGrGDSvTkLH~DmSDAVNIL~h 352 (632)
.|.+.++|.||.|..|..+++++
T Consensus 130 --iG~~gs~t~~H~D~~~n~~~qv~ 152 (235)
T 4gjz_A 130 --FGPQGTISPLHQDPQQNFLVQVM 152 (235)
T ss_dssp --EECTTCEEEEECCSSEEEEEEEE
T ss_pred --EeCCCCCceeeeccccceEEEEe
Confidence 34566899999999987665554
No 3
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=99.13 E-value=2.1e-10 Score=120.28 Aligned_cols=53 Identities=36% Similarity=0.486 Sum_probs=50.3
Q ss_pred CCcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCccchHHHHHHHHH
Q 006745 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEE 586 (632)
Q Consensus 534 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteE 586 (632)
+..++.++|.+||++|||+|..|||+|+..||.|+..|+++.|+...+++|-+
T Consensus 252 ~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~~~~~~~~ 304 (336)
T 3k2o_A 252 EFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVVWHKTVR 304 (336)
T ss_dssp GGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHHHHHHHHH
T ss_pred cCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999999999999954
No 4
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=98.95 E-value=1e-08 Score=111.58 Aligned_cols=84 Identities=14% Similarity=0.081 Sum_probs=66.0
Q ss_pred CCcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCccchHHHHHHHHHhhcCCCccCCccchhhHhHHHHHHHHH
Q 006745 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQ 613 (632)
Q Consensus 534 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteEfR~Lp~~H~akEDKLeVkkm~l~A~~~ 613 (632)
..++..++|..||++|||+|.-|||.||..||-|+..|++.-|+...++.++==+++--..+. .=--...|++||+..
T Consensus 262 ~~~~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~~~l~~~~~E~~~~v~~~~--~~p~f~~~~w~~~~~ 339 (451)
T 2yu1_A 262 VSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRTRVPNKF--RYPFYYEMCWYVLER 339 (451)
T ss_dssp SSCCEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHHHHHHHHHHHHHTTCCTTS--SCTTHHHHHHHHHHH
T ss_pred cccceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHHHHHHHHHHHHhhCCCccc--cCccHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999999999887622222111111 112245899999998
Q ss_pred HHHHhC
Q 006745 614 AVKDIS 619 (632)
Q Consensus 614 Av~~l~ 619 (632)
-++.|.
T Consensus 340 ~~~~~~ 345 (451)
T 2yu1_A 340 YVYCIT 345 (451)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 887764
No 5
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=98.92 E-value=9.8e-09 Score=109.18 Aligned_cols=83 Identities=18% Similarity=0.240 Sum_probs=66.2
Q ss_pred CcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCccchHHHHHHHH-HhhcCCCccCCccchhhHhHHHHHHHHH
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTE-EFRLLPPNHRAKEDKLEVKKMILYAVSQ 613 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLte-EfR~Lp~~H~akEDKLeVkkm~l~A~~~ 613 (632)
.+++.++|..||++|||+|..|||.||..||-|+..|++..|+...++..+ |-|.=.+ .|--=-...+|++|+++.
T Consensus 214 ~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~~~~---~~f~fp~F~~~~w~~~~~ 290 (371)
T 3k3o_A 214 DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTA---DLFRFPNFETICWYVGKH 290 (371)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHC-------CCCTTHHHHHHHHHHH
T ss_pred CceEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhhHHHHHHHHHHHHhcCCC---cccccccHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999887 4333110 011111357889999988
Q ss_pred HHHHhCC
Q 006745 614 AVKDISD 620 (632)
Q Consensus 614 Av~~l~~ 620 (632)
.+..|++
T Consensus 291 ~~~~~~~ 297 (371)
T 3k3o_A 291 ILDIFRG 297 (371)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877763
No 6
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=98.87 E-value=6.7e-09 Score=113.89 Aligned_cols=83 Identities=17% Similarity=0.237 Sum_probs=66.0
Q ss_pred CcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCccchHHHHHHHHHhhcCCCccCCccchhhHhHHHHHHHHHH
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQA 614 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteEfR~Lp~~H~akEDKLeVkkm~l~A~~~A 614 (632)
.+++.++|..||++|||+|..|||.||..||-|...|++..|+...++..+==+.|.. ..+-.-.....|++|+++.-
T Consensus 333 ~~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~e~~~~~--~~~~~~p~f~~~~w~~~~~~ 410 (488)
T 3kv5_D 333 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKT--PDLFKFPFFEAICWFVAKNL 410 (488)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHTTC--CTTSSCTTHHHHHHHHHHHH
T ss_pred cceEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccCHHHHHHHHHHHHhcCC--cccccCccHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999998887654343322 12222335577788888876
Q ss_pred HHHhC
Q 006745 615 VKDIS 619 (632)
Q Consensus 615 v~~l~ 619 (632)
+..|+
T Consensus 411 l~~~~ 415 (488)
T 3kv5_D 411 LETLK 415 (488)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66665
No 7
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=98.87 E-value=4e-09 Score=114.58 Aligned_cols=81 Identities=17% Similarity=0.279 Sum_probs=67.7
Q ss_pred CcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCccchHHHHHHHHHhhcCCCccCCccchh---hHhHHHHHHH
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAKEDKL---EVKKMILYAV 611 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteEfR~Lp~~H~akEDKL---eVkkm~l~A~ 611 (632)
.+++.++|..||++|||+|..|||.||..||-|+..|++..|+..-++..+==+++.. .+|. ...+|++|++
T Consensus 298 ~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~~~-----~~~~~~p~f~~~~w~~~ 372 (447)
T 3kv4_A 298 DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLST-----ADLFRFPNFETICWYVG 372 (447)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHTTC-----CGGGSCTTHHHHHHHHH
T ss_pred cceEEEEECCCcEEecCCCCeEEEecCCCEEEEccccccccCHHHHHHHHHHHHhcCC-----CccccccCHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999998873333321 2333 3478899999
Q ss_pred HHHHHHhCC
Q 006745 612 SQAVKDISD 620 (632)
Q Consensus 612 ~~Av~~l~~ 620 (632)
+..+..|++
T Consensus 373 ~~~~~~~~~ 381 (447)
T 3kv4_A 373 KHILDIFRG 381 (447)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988887763
No 8
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=98.85 E-value=2.2e-09 Score=111.84 Aligned_cols=42 Identities=14% Similarity=0.182 Sum_probs=39.4
Q ss_pred CcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCccc
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 576 (632)
+.++.+++.+||++|||+|..|||+||..||.|..-|.++..
T Consensus 237 ~~~~~~~L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~~~ 278 (338)
T 3al5_A 237 ARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLPS 278 (338)
T ss_dssp CCEEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECSSCG
T ss_pred CCCEEEEECCCCEEEECCCCeEEEeeCCCEEEEEEEecCCcc
Confidence 579999999999999999999999999999999999998874
No 9
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=98.80 E-value=3.5e-08 Score=105.79 Aligned_cols=84 Identities=17% Similarity=0.222 Sum_probs=65.8
Q ss_pred CCcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCccchHHHHHHHHHhhcCCCccCCccchhhHhHHHHHHHHH
Q 006745 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQ 613 (632)
Q Consensus 534 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteEfR~Lp~~H~akEDKLeVkkm~l~A~~~ 613 (632)
..+++.++|..||++|||+|..|||.|+..||-|...|+++.|+...++..+==+.|.. ..+-+=.....|++|++..
T Consensus 241 ~~~~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~k~--~~~~~fp~F~~~~w~~a~~ 318 (397)
T 3kv9_A 241 VDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKT--PDLFKFPFFEAICWFVAKN 318 (397)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHTC--GGGGGSTTHHHHHHHHHHH
T ss_pred cCceEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchhHHHHHHHHHHHHhcCC--CccCcCccHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999988877553333321 1222233567788888887
Q ss_pred HHHHhC
Q 006745 614 AVKDIS 619 (632)
Q Consensus 614 Av~~l~ 619 (632)
-++.|+
T Consensus 319 ~l~~~~ 324 (397)
T 3kv9_A 319 LLETLK 324 (397)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666664
No 10
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=98.76 E-value=4.1e-08 Score=105.08 Aligned_cols=83 Identities=19% Similarity=0.215 Sum_probs=67.2
Q ss_pred CCcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCccchHHHHHHHH-HhhcCCCccCCccchhhHhHHHHHHHH
Q 006745 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTE-EFRLLPPNHRAKEDKLEVKKMILYAVS 612 (632)
Q Consensus 534 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLte-EfR~Lp~~H~akEDKLeVkkm~l~A~~ 612 (632)
..+++.++|..||++|||+|..|||.|+..||-|...|++..|+..-++..+ |-|.=. .. +-.=-...+|++|++.
T Consensus 240 ~~~~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~nl~~~l~~~~~E~~~~~-~~--~f~fp~F~~~~wy~~~ 316 (392)
T 3pua_A 240 VDKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKL-GS--LTQFPNFETACWYMGK 316 (392)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTCHHHHHHHHHHHHHHTC-CC--SSCCTTHHHHHHHHHH
T ss_pred ccceEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhhHHHHHHHHHHHHHhCC-Cc--cCcCCChHHHHHHHHH
Confidence 3689999999999999999999999999999999999999999999999887 544321 11 1111245788999988
Q ss_pred HHHHHhC
Q 006745 613 QAVKDIS 619 (632)
Q Consensus 613 ~Av~~l~ 619 (632)
..++.|+
T Consensus 317 ~~l~~~~ 323 (392)
T 3pua_A 317 HLLEAFK 323 (392)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877776
No 11
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=98.74 E-value=1.3e-09 Score=114.41 Aligned_cols=41 Identities=15% Similarity=0.310 Sum_probs=36.8
Q ss_pred CCcceEEEeecCCeEEecCCCcccccccc-hhhhhhhcccCc
Q 006745 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLK-SCIKAALDFVSP 574 (632)
Q Consensus 534 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLk-SCIKVAlDFVSP 574 (632)
.+.++.+++.+||++|||+|..|||+||. .|+.|++.|..+
T Consensus 257 ~~~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~~ 298 (349)
T 3d8c_A 257 NVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYK 298 (349)
T ss_dssp GCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEEEE
T ss_pred cCCcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEEcC
Confidence 35799999999999999999999999998 588899998763
No 12
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=97.62 E-value=3.7e-05 Score=80.87 Aligned_cols=86 Identities=17% Similarity=0.291 Sum_probs=71.3
Q ss_pred CcceeeeecCCChHHHHHHHHHHHHhhcccccCCCCcccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecC
Q 006745 473 GGAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPA 552 (632)
Q Consensus 473 ~GAlWDIFrreDv~KLreyL~kh~~Efrh~~~~pv~~v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPA 552 (632)
+--+|=.=..+...|++++++++. .|. |.+.++++.+- |++ .||--+.|+|++||.|+|++
T Consensus 233 ~~~~Wy~VP~e~~~~~e~l~~k~~--------------~d~-~~~~~~~~p~~---L~~-~gIPvyr~~QkpGd~Vi~~P 293 (332)
T 2xxz_A 233 GDCEWFAVHEHYWETISAFCDRHG--------------VDY-LTGSWWPILDD---LYA-SNIPVYRFVQRPGDLVWINA 293 (332)
T ss_dssp SCEEEEEECGGGHHHHHHHHHHTT--------------CCT-TTSCBCCCHHH---HHH-TTCCCEEEEECTTCEEEECT
T ss_pred CceEEEEECHHHHHHHHHHHHhcC--------------Cch-hhceecCCHHH---HHh-CCCCeEEEEECCCCEEEECC
Confidence 455899999999999999997632 122 34567777643 444 59999999999999999999
Q ss_pred CCcccccccchhhhhhhcccCccch
Q 006745 553 GCPHQVRNLKSCIKAALDFVSPENV 577 (632)
Q Consensus 553 GCPHQVRNLkSCIKVAlDFVSPEnV 577 (632)
||-|||.|.=-|+++|-.|..|...
T Consensus 294 gayH~v~n~G~~~n~awN~a~~~~~ 318 (332)
T 2xxz_A 294 GTVHWVQATGWCNNIAWNVGPLTAY 318 (332)
T ss_dssp TCEEEEEESSSEEEEEEEEESCTTG
T ss_pred CceEEEEecceeeEEEEEeCCCcHH
Confidence 9999999999999999999999765
No 13
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=97.54 E-value=3.2e-05 Score=85.50 Aligned_cols=51 Identities=20% Similarity=0.238 Sum_probs=47.1
Q ss_pred CcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCccchHHHHHHHH
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTE 585 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLte 585 (632)
.....++|..||++|||+|..|+|.|+..||-|.-.|++..|+..-+++++
T Consensus 363 ~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~nl~~qlri~~ 413 (528)
T 3pur_A 363 GAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYH 413 (528)
T ss_dssp TCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGGHHHHHHHHH
T ss_pred ccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhhHHHHHHHHH
Confidence 455689999999999999999999999999999999999999999888664
No 14
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=97.45 E-value=8.5e-05 Score=82.31 Aligned_cols=88 Identities=20% Similarity=0.321 Sum_probs=73.1
Q ss_pred CcceeeeecCCChHHHHHHHHHHHHhhcccccCCCCcccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecC
Q 006745 473 GGAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPA 552 (632)
Q Consensus 473 ~GAlWDIFrreDv~KLreyL~kh~~Efrh~~~~pv~~v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPA 552 (632)
+-.+|=.=..++..|++++++++. .|. +...++++.+. |++ .||-=+.|+|++||.|++++
T Consensus 292 g~~~Wy~VP~e~~~k~e~l~~k~~--------------~~~-~~~~~~~~p~~---L~~-~gIPvyr~vQkpGd~Vi~~P 352 (531)
T 3avr_A 292 GDCEWFVVPEGYWGVLNDFCEKNN--------------LNF-LMGSWWPNLED---LYE-ANVPVYRFIQRPGDLVWINA 352 (531)
T ss_dssp SCEEEEEECGGGHHHHHHHHHHTT--------------CCT-TTSCBCCCHHH---HHH-TTCCCEEEEECTTCEEEECT
T ss_pred CCeEEEEeCHHHHHHHHHHHHHcC--------------CCh-hhceeecCHHH---HHh-CCCCeEEEEECCCCEEEECC
Confidence 456899999999999999997742 232 34567777554 444 59999999999999999999
Q ss_pred CCcccccccchhhhhhhcccCccchHH
Q 006745 553 GCPHQVRNLKSCIKAALDFVSPENVSQ 579 (632)
Q Consensus 553 GCPHQVRNLkSCIKVAlDFVSPEnV~e 579 (632)
||.|||.|+=-|+++|..|..|.-..-
T Consensus 353 gayH~v~n~G~~~n~awN~a~~~~~q~ 379 (531)
T 3avr_A 353 GTVHWVQAIGWCNNIAWNVGPLTACQY 379 (531)
T ss_dssp TCEEEEEESSSEEEEEEEECCSSHHHH
T ss_pred CceEEEEecceeeeeEEEeccCchHHH
Confidence 999999999999999999999996553
No 15
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=96.77 E-value=0.00094 Score=73.51 Aligned_cols=87 Identities=17% Similarity=0.267 Sum_probs=71.0
Q ss_pred CCcceeeeecCCChHHHHHHHHHHHHhhcccccCCCCcccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEec
Q 006745 472 DGGAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVP 551 (632)
Q Consensus 472 ~~GAlWDIFrreDv~KLreyL~kh~~Efrh~~~~pv~~v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIP 551 (632)
.+--+|=.=..+...+++++++++.. +. +.+.++.+.+. |+ +.||.=+.|+|++||.|+++
T Consensus 266 gg~c~WY~VP~e~~~k~e~l~~k~~~--------------d~-l~~~~~pspe~---L~-kagIPvyr~iQkPGdfVit~ 326 (510)
T 4ask_A 266 PGDCEWFAVHEHYWETISAFCDRHGV--------------DY-LTGSWWPILDD---LY-ASNIPVYRFVQRPGDLVWIN 326 (510)
T ss_dssp ESCEEEEEECGGGHHHHHHHHHHTTC--------------CT-TTSCBCCCHHH---HH-HTTCCCEEEEECTTCEEEEC
T ss_pred CCceeEEEECHHHHHHHHHHHHHhCc--------------ch-hhccccCCHHH---HH-hCCCCeEEEEECCCCEEEEC
Confidence 34569999999999999999986321 22 34667776653 33 47999999999999999999
Q ss_pred CCCcccccccchhhhhhhcccCccch
Q 006745 552 AGCPHQVRNLKSCIKAALDFVSPENV 577 (632)
Q Consensus 552 AGCPHQVRNLkSCIKVAlDFVSPEnV 577 (632)
+||.|+|+|.==|+++|-.|.-|-..
T Consensus 327 PgtyH~Vqs~Gf~~niaWNvap~t~~ 352 (510)
T 4ask_A 327 AGTVHWVQATGWCNNIAWNVGPLTAY 352 (510)
T ss_dssp TTCEEEEEESSSEEEEEEEECBSSHH
T ss_pred CCceEEEEecCeeeeeEEEecCCCHH
Confidence 99999999999999999999877543
No 16
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=96.02 E-value=0.0056 Score=64.90 Aligned_cols=93 Identities=22% Similarity=0.249 Sum_probs=78.6
Q ss_pred ceeeeecCCChHHHHHHHHHHHHh-hcccccCCCCcccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCC
Q 006745 475 AVWDIFRRQDISKLQDYLKKHFRE-FRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAG 553 (632)
Q Consensus 475 AlWDIFrreDv~KLreyL~kh~~E-frh~~~~pv~~v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAG 553 (632)
-+|=.-..++..|+++++++.+.+ |+ .|.. =+|.+.+.++.+. |+ +.||.-.+++|++||.|++-.|
T Consensus 210 K~WY~VP~~~~~kfE~l~k~~~p~~~~--~c~~------fL~h~~~lisP~~---L~-~~GIpv~~~vQ~pGEfViTfP~ 277 (354)
T 3dxt_A 210 KTWYVVPPEHGQRLERLARELFPGSSR--GCGA------FLRHKVALISPTV---LK-ENGIPFNRITQEAGEFMVTFPY 277 (354)
T ss_dssp EEEEEECGGGHHHHHHHHHHHSHHHHH--HCTT------GGGGCCEEECHHH---HH-HTTCCCEEEEECTTCEEEECTT
T ss_pred eEEEEeCHHHHHHHHHHHHHhCchhhh--hcHH------HHhcCcccCCHHH---HH-HCCCceEEEEeCCCcEEEECCC
Confidence 499999999999999999998654 22 2322 2466788888873 44 4799999999999999999999
Q ss_pred CcccccccchhhhhhhcccCccchHH
Q 006745 554 CPHQVRNLKSCIKAALDFVSPENVSQ 579 (632)
Q Consensus 554 CPHQVRNLkSCIKVAlDFVSPEnV~e 579 (632)
+=|.|.|+--|+..|..|..|+=+..
T Consensus 278 aYH~gfn~Gfn~aEAvNFA~~~Wl~~ 303 (354)
T 3dxt_A 278 GYHAGFNHGFNCAEAINFATPRWIDY 303 (354)
T ss_dssp CEEEEEESSSEEEEEEEECCGGGHHH
T ss_pred ceEEEeeccccHhHhhccCcHHHHHh
Confidence 99999999999999999999997764
No 17
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=95.41 E-value=0.017 Score=60.46 Aligned_cols=80 Identities=15% Similarity=0.187 Sum_probs=52.9
Q ss_pred CcceEEEeecCCeEEecCCCccccccc--chhhhhhhcccCccchHHHHHH--------HHHhhcCCCccCCccchhhHh
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNL--KSCIKAALDFVSPENVSQCVRL--------TEEFRLLPPNHRAKEDKLEVK 604 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNL--kSCIKVAlDFVSPEnV~ec~rL--------teEfR~Lp~~H~akEDKLeVk 604 (632)
..++.++-.+||+.|||+|.+|||+++ ..|+.|.+- +| +..+-+.- ..+||.||..... .-=++.
T Consensus 215 ~~~~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~--~~-~~~dll~~~l~~~~~~~~~~r~lp~~~~~--~~~~~~ 289 (342)
T 1vrb_A 215 PDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG--QP-AWLDLMLAALRKKLISDNRFRELAVNHQS--LHESSK 289 (342)
T ss_dssp CSSEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC--CC-BHHHHHHHHHHHHHTTSGGGGSBCCCTTS--SCHHHH
T ss_pred CCceEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC--CC-cHHHHHHHHHHHHHHhCHHhhhCCCcccc--Cchhhh
Confidence 567999999999999999999999999 468888777 44 33332221 3478888765421 112344
Q ss_pred HHHHHHHHHHHHHhC
Q 006745 605 KMILYAVSQAVKDIS 619 (632)
Q Consensus 605 km~l~A~~~Av~~l~ 619 (632)
.-+.-.+.++++.|.
T Consensus 290 ~~~~~~~~~ll~~l~ 304 (342)
T 1vrb_A 290 SELNGYLESLIQTLS 304 (342)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 444555555555443
No 18
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=95.01 E-value=0.023 Score=60.67 Aligned_cols=92 Identities=20% Similarity=0.300 Sum_probs=74.5
Q ss_pred ceeeeecCCChHHHHHHHHHHHHh-hcccccCCCCcccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCC
Q 006745 475 AVWDIFRRQDISKLQDYLKKHFRE-FRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAG 553 (632)
Q Consensus 475 AlWDIFrreDv~KLreyL~kh~~E-frh~~~~pv~~v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAG 553 (632)
-+|=.-..++..|+++++++++-+ |. .|.. =+|...+.++... |+ +.||.-.+++|++||.|++=.|
T Consensus 253 K~WY~VP~~~~~kfE~l~k~~~p~~~~--~c~~------fL~h~~~lisP~~---L~-~~GIpv~r~vQ~pGEfViTfP~ 320 (373)
T 3opt_A 253 KQWYSIPQEDRFKFYKFMQEQFPEEAK--NCPE------FLRHKMFLASPKL---LQ-ENGIRCNEIVHHEGEFMITYPY 320 (373)
T ss_dssp EEEEECCGGGHHHHHHHHHHSSHHHHS--SCSS------CTTTSCEEECHHH---HH-TTTCCCEEEEECTTCEEEECTT
T ss_pred eEEEEeCHHHHHHHHHHHHHhChhhhh--hCHH------HhhCCcccCCHHH---HH-hcCCceEEEEECCCCEEEECCC
Confidence 489999999999999999998754 33 2332 2455678888853 54 5799999999999999999999
Q ss_pred CcccccccchhhhhhhcccCccchH
Q 006745 554 CPHQVRNLKSCIKAALDFVSPENVS 578 (632)
Q Consensus 554 CPHQVRNLkSCIKVAlDFVSPEnV~ 578 (632)
+=|.|.|+--|+..|..|..|+=+.
T Consensus 321 aYH~gfn~Gfn~aEAvNFA~~~Wl~ 345 (373)
T 3opt_A 321 GYHAGFNYGYNLAESVNFALEEWLP 345 (373)
T ss_dssp CCEEEEESSSEEEEEEEECCC----
T ss_pred ceEEEEecCccHHHHHccCcHHHHH
Confidence 9999999999999999999987654
No 19
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=94.73 E-value=0.03 Score=59.90 Aligned_cols=94 Identities=18% Similarity=0.163 Sum_probs=78.4
Q ss_pred cceeeeecCCChHHHHHHHHHHHHh-hcccccCCCCcccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecC
Q 006745 474 GAVWDIFRRQDISKLQDYLKKHFRE-FRHIHCCPVQQVIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPA 552 (632)
Q Consensus 474 GAlWDIFrreDv~KLreyL~kh~~E-frh~~~~pv~~v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPA 552 (632)
--.|=.=.+++..|++++++++.-+ |+ .|. +=+|...+.++.+. |+ +.||.-.+++|++||.|++=.
T Consensus 227 pK~WY~VP~~~~~kfE~l~~~~~P~~~~--~~~------~~L~h~~~~isP~~---L~-~~GIpv~r~vQ~pGEfViTfP 294 (381)
T 2ox0_A 227 PKSWYSVPPEHGKRLERLAKGFFPGSAQ--SCE------AFLRHKMTLISPLM---LK-KYGIPFDKVTQEAGEFMITFP 294 (381)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHSHHHHH--HCT------TGGGGSCEEECHHH---HH-HTTCCCEEEEECTTCEEEECT
T ss_pred ceEEEecCHHHHHHHHHHHHHhChhhhh--cch------HHhhccccccCHHH---HH-HCCCceEEEEecCCCEEEECC
Confidence 3589999999999999999998755 33 232 23466788888854 44 479999999999999999999
Q ss_pred CCcccccccchhhhhhhcccCccchHH
Q 006745 553 GCPHQVRNLKSCIKAALDFVSPENVSQ 579 (632)
Q Consensus 553 GCPHQVRNLkSCIKVAlDFVSPEnV~e 579 (632)
|+=|.|.|+=-|+..|..|..|+=+..
T Consensus 295 ~aYH~gfn~GfN~aEAvNFA~~~Wl~~ 321 (381)
T 2ox0_A 295 YGYHAGFNHGFNCAESTNFATRRWIEY 321 (381)
T ss_dssp TCEEEEEECSSEEEEEEEECCTTHHHH
T ss_pred CcEEEeecCcccHHHHhccCcHHHHHH
Confidence 999999999999999999999876644
No 20
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=92.74 E-value=0.032 Score=48.66 Aligned_cols=24 Identities=29% Similarity=0.495 Sum_probs=20.8
Q ss_pred EEeecCCeEEecCCCcccccccch
Q 006745 540 FIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 540 f~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
+.=+.||.|+||||+||+++|.-.
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~ 98 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDG 98 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECS
T ss_pred EEECCCCEEEECCCCcEEEEeCCC
Confidence 455779999999999999999753
No 21
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=92.18 E-value=0.047 Score=46.90 Aligned_cols=23 Identities=35% Similarity=0.336 Sum_probs=20.3
Q ss_pred EEeecCCeEEecCCCcccccccc
Q 006745 540 FIQKLGEAVFVPAGCPHQVRNLK 562 (632)
Q Consensus 540 f~Q~lGEAVFIPAGCPHQVRNLk 562 (632)
+.-..||++|||+|.+|++.|.-
T Consensus 61 ~~l~~G~~~~ip~G~~H~~~N~g 83 (98)
T 3lag_A 61 AQLKTGRSYARKAGVQHDVRNES 83 (98)
T ss_dssp CCBCTTCCEEECTTCEEEEBCCS
T ss_pred EEecCCcEEEEcCCCcEECEECC
Confidence 44578999999999999999975
No 22
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=91.90 E-value=0.044 Score=47.72 Aligned_cols=58 Identities=14% Similarity=0.167 Sum_probs=38.3
Q ss_pred cCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCcc
Q 006745 511 IHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPE 575 (632)
Q Consensus 511 ~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 575 (632)
.|| +++.+|+-.-.- ++-|+.=++.=..||+++||+|.||+++|...+. +.+-+|.|.
T Consensus 53 ~H~-~~e~~~Vl~G~~-----~~~i~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~-~~~~~v~p~ 110 (114)
T 3fjs_A 53 SVA-GPSTIQCLEGEV-----EIGVDGAQRRLHQGDLLYLGAGAAHDVNAITNTS-LLVTVVLVD 110 (114)
T ss_dssp CCS-SCEEEEEEESCE-----EEEETTEEEEECTTEEEEECTTCCEEEEESSSEE-EEEEEECC-
T ss_pred eCC-CcEEEEEEECEE-----EEEECCEEEEECCCCEEEECCCCcEEEEeCCCcE-EEEEEEeCC
Confidence 444 356666544332 2445556788899999999999999999997653 333444443
No 23
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=91.66 E-value=0.054 Score=46.06 Aligned_cols=59 Identities=24% Similarity=0.316 Sum_probs=40.3
Q ss_pred cccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCcc
Q 006745 509 QVIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPE 575 (632)
Q Consensus 509 ~v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 575 (632)
...|| .+|-+|+-.-.- ++-+..=++.=..||+++||+|+||+++|...|. .+.+.+|.
T Consensus 49 ~H~H~-~~e~~~vl~G~~-----~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~--~l~v~~p~ 107 (116)
T 2pfw_A 49 VHAHR-HSQVSYVVEGEF-----HVNVDGVIKVLTAGDSFFVPPHVDHGAVCPTGGI--LIDTFSPA 107 (116)
T ss_dssp EECCS-SEEEEEEEEECE-----EEEETTEEEEECTTCEEEECTTCCEEEEESSCEE--EEEEEESC
T ss_pred cEECC-cceEEEEEeeEE-----EEEECCEEEEeCCCCEEEECcCCceeeEeCCCcE--EEEEECCc
Confidence 34666 667777644332 1334445677889999999999999999998763 34445553
No 24
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=91.31 E-value=0.041 Score=46.04 Aligned_cols=39 Identities=21% Similarity=0.275 Sum_probs=29.4
Q ss_pred CCc-ceEEEeecCCeEEecCCCcccccccchhhhhhhcccCc
Q 006745 534 GIE-PWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSP 574 (632)
Q Consensus 534 GVE-pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 574 (632)
.++ .=++.=..||+++||+|.+|+++|...|. .+..++|
T Consensus 69 ~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~--~l~~~~p 108 (110)
T 2q30_A 69 VGDGDAVIPAPRGAVLVAPISTPHGVRAVTDMK--VLVTIAP 108 (110)
T ss_dssp ECGGGCEEEECTTEEEEEETTSCEEEEESSSEE--EEEEEES
T ss_pred EeCCCEEEEECCCCEEEeCCCCcEEEEEcCCcE--EEEEECC
Confidence 344 45677889999999999999999987752 3444444
No 25
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=91.25 E-value=0.093 Score=43.97 Aligned_cols=26 Identities=27% Similarity=0.201 Sum_probs=22.1
Q ss_pred eEEEeecCCeEEecCCCcccccccch
Q 006745 538 WTFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 538 Wtf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
=++.=..||+|+||||.||+++|.-+
T Consensus 59 ~~~~l~~Gd~~~~p~~~~H~~~N~g~ 84 (97)
T 2fqp_A 59 VTSQLTRGVSYTRPEGVEHNVINPSD 84 (97)
T ss_dssp EEEEECTTCCEEECTTCEEEEECCSS
T ss_pred EEEEEcCCCEEEeCCCCcccCEeCCC
Confidence 34566789999999999999999864
No 26
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=91.16 E-value=0.065 Score=47.13 Aligned_cols=41 Identities=27% Similarity=0.182 Sum_probs=30.4
Q ss_pred CcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCcc
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPE 575 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 575 (632)
+..=++.=..||+|+||+|+||+++|....--+.+-+++|.
T Consensus 76 ~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 76 DQGRTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp GGTEEEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred ECCEEEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 44557778899999999999999999865433444455544
No 27
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=90.84 E-value=0.063 Score=46.47 Aligned_cols=38 Identities=18% Similarity=0.101 Sum_probs=28.6
Q ss_pred ceEEEeecCCeEEecCCCcccccccchhhhhhhcccCc
Q 006745 537 PWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSP 574 (632)
Q Consensus 537 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 574 (632)
.=++.=..||+|+||+|+||+++|..+.--+.+.+++|
T Consensus 78 ~~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~~p 115 (125)
T 3h8u_A 78 GIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAP 115 (125)
T ss_dssp TCEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEES
T ss_pred CeEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEECC
Confidence 34566689999999999999999986544344555555
No 28
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=90.27 E-value=0.084 Score=45.04 Aligned_cols=46 Identities=11% Similarity=0.096 Sum_probs=32.7
Q ss_pred cccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccchhh
Q 006745 515 HDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCI 565 (632)
Q Consensus 515 HDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCI 565 (632)
+++-+|+-.-.- ++.|..=++.=..||+++||||.||.++|...|.
T Consensus 58 ~~e~~~vl~G~~-----~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~ 103 (114)
T 2ozj_A 58 GDTLYLILQGEA-----VITFDDQKIDLVPEDVLMVPAHKIHAIAGKGRFK 103 (114)
T ss_dssp SCEEEEEEEEEE-----EEEETTEEEEECTTCEEEECTTCCBEEEEEEEEE
T ss_pred CCeEEEEEeCEE-----EEEECCEEEEecCCCEEEECCCCcEEEEeCCCcE
Confidence 455555533321 2445566778899999999999999999986553
No 29
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=90.23 E-value=0.092 Score=52.52 Aligned_cols=77 Identities=14% Similarity=0.101 Sum_probs=53.1
Q ss_pred cccCCccccccccCHHHHHHHHHHh--------CCcce----------EEEeecCCeEEecCCCcccccccchhh-hh--
Q 006745 509 QVIHPIHDQVFYLSSEHKAKLKQEY--------GIEPW----------TFIQKLGEAVFVPAGCPHQVRNLKSCI-KA-- 567 (632)
Q Consensus 509 ~v~dPIHDQ~fYLt~ehk~kLkEEy--------GVEpW----------tf~Q~lGEAVFIPAGCPHQVRNLkSCI-KV-- 567 (632)
...||-.+..||+-.-.-. + .. |-++| ++.=..||.||||+|+||..+|.-.-- ++
T Consensus 58 ~H~H~~~~E~~yVLeG~~~-~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l 134 (239)
T 2xlg_A 58 PHIHYFINEWFWTPEGGIE-L--FHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVF 134 (239)
T ss_dssp SEEESSEEEEEEETTCCCE-E--EEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEE
T ss_pred CeECCCccEEEEEEEeEEE-E--EEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 3466666777776554321 1 12 44666 888899999999999999999976531 22
Q ss_pred -------hhccc-CccchHHHHHHHHHhh
Q 006745 568 -------ALDFV-SPENVSQCVRLTEEFR 588 (632)
Q Consensus 568 -------AlDFV-SPEnV~ec~rLteEfR 588 (632)
+-||. +|....+|++...+..
T Consensus 135 ~~~~~~~~~~~~~~p~~~e~~f~~l~~~~ 163 (239)
T 2xlg_A 135 VWMRNEVAPDFPYHDGGMREYFQAVGPRI 163 (239)
T ss_dssp EEEECSSCTTCSCTTCSHHHHHHHHSCBC
T ss_pred EEEecccChhhccCcchHHHHHHHhhhhc
Confidence 22332 8888999998887654
No 30
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=90.04 E-value=0.068 Score=43.69 Aligned_cols=27 Identities=41% Similarity=0.562 Sum_probs=22.8
Q ss_pred ceEEEeecCCeEEecCCCcccccccch
Q 006745 537 PWTFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 537 pWtf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
.=++.=..||+++||+|++|+++|...
T Consensus 66 ~~~~~l~~Gd~~~ip~~~~H~~~~~~~ 92 (105)
T 1v70_A 66 EEEALLAPGMAAFAPAGAPHGVRNESA 92 (105)
T ss_dssp TEEEEECTTCEEEECTTSCEEEECCSS
T ss_pred CEEEEeCCCCEEEECCCCcEEeEeCCC
Confidence 346667899999999999999999753
No 31
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=90.02 E-value=0.12 Score=44.33 Aligned_cols=39 Identities=21% Similarity=0.164 Sum_probs=27.2
Q ss_pred ceEE-EeecCCeEEecCCCcccccccchh--hhhhhcccCcc
Q 006745 537 PWTF-IQKLGEAVFVPAGCPHQVRNLKSC--IKAALDFVSPE 575 (632)
Q Consensus 537 pWtf-~Q~lGEAVFIPAGCPHQVRNLkSC--IKVAlDFVSPE 575 (632)
.-++ .=..||+++||+|.||+++|..+. .-+.+.|-+|+
T Consensus 64 ~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~ 105 (117)
T 2b8m_A 64 DQEPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPK 105 (117)
T ss_dssp TSCCEEEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGG
T ss_pred CEEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCC
Confidence 3344 667899999999999999998653 33334344444
No 32
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=89.89 E-value=0.14 Score=44.15 Aligned_cols=59 Identities=29% Similarity=0.350 Sum_probs=40.7
Q ss_pred ccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCcc
Q 006745 510 VIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPE 575 (632)
Q Consensus 510 v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 575 (632)
..|| ++|.+|+-.-.- ++-|..-++.=..||+|+||+|+||+++|... --+.+.+++|-
T Consensus 57 H~H~-~~e~~~vl~G~~-----~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~~p~ 115 (126)
T 4e2g_A 57 HEHP-HEQAGVMLEGTL-----ELTIGEETRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIFSPP 115 (126)
T ss_dssp ECCS-SEEEEEEEEECE-----EEEETTEEEEECTTEEEEECTTCCEEEECCTT-CEEEEEEEESC
T ss_pred ccCC-CceEEEEEEeEE-----EEEECCEEEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEECCC
Confidence 4566 467666644432 23445567777899999999999999999987 22355566663
No 33
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=89.50 E-value=0.1 Score=42.98 Aligned_cols=28 Identities=21% Similarity=0.408 Sum_probs=23.2
Q ss_pred eEEEeecCCeEEecCCCcccccccchhh
Q 006745 538 WTFIQKLGEAVFVPAGCPHQVRNLKSCI 565 (632)
Q Consensus 538 Wtf~Q~lGEAVFIPAGCPHQVRNLkSCI 565 (632)
=++.=..||+++||+|.+|+++|...|.
T Consensus 68 ~~~~l~~Gd~~~ip~~~~H~~~~~~~~~ 95 (102)
T 3d82_A 68 QNITLQAGEMYVIPKGVEHKPMAKEECK 95 (102)
T ss_dssp CEEEEETTEEEEECTTCCBEEEEEEEEE
T ss_pred EEEEEcCCCEEEECCCCeEeeEcCCCCE
Confidence 3556679999999999999999986553
No 34
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=89.40 E-value=0.11 Score=44.98 Aligned_cols=30 Identities=20% Similarity=0.287 Sum_probs=25.3
Q ss_pred ceEEEeecCCeEEecCCCcccccccchhhh
Q 006745 537 PWTFIQKLGEAVFVPAGCPHQVRNLKSCIK 566 (632)
Q Consensus 537 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIK 566 (632)
.-++.=..||+|+||+|.||+.+|...+-|
T Consensus 67 g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~ 96 (101)
T 1o5u_A 67 GKKYVIEKGDLVTFPKGLRCRWKVLEPVRK 96 (101)
T ss_dssp CCEEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred CCEEEECCCCEEEECCCCcEEEEeCCCeeE
Confidence 456788899999999999999999766543
No 35
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=89.14 E-value=0.12 Score=43.70 Aligned_cols=50 Identities=22% Similarity=0.341 Sum_probs=36.1
Q ss_pred ccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccchhh
Q 006745 510 VIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCI 565 (632)
Q Consensus 510 v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCI 565 (632)
..|+ +++-+|+..-.-. +.++.-++.=..||+++||+|.||+++|...|.
T Consensus 56 H~H~-~~e~~~vl~G~~~-----~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~ 105 (115)
T 1yhf_A 56 HSSP-GDAMVTILSGLAE-----ITIDQETYRVAEGQTIVMPAGIPHALYAVEAFQ 105 (115)
T ss_dssp ECCS-SEEEEEEEESEEE-----EEETTEEEEEETTCEEEECTTSCEEEEESSCEE
T ss_pred EECC-CcEEEEEEeCEEE-----EEECCEEEEECCCCEEEECCCCCEEEEECCCce
Confidence 4556 5677776554322 335556678889999999999999999987553
No 36
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=88.33 E-value=0.18 Score=42.63 Aligned_cols=27 Identities=26% Similarity=0.480 Sum_probs=23.6
Q ss_pred eEEEeecCCeEEecCCCcccccccchh
Q 006745 538 WTFIQKLGEAVFVPAGCPHQVRNLKSC 564 (632)
Q Consensus 538 Wtf~Q~lGEAVFIPAGCPHQVRNLkSC 564 (632)
=++.=..||+++||+|.||..+|...|
T Consensus 67 ~~~~l~~Gd~~~ip~~~~H~~~~~~~~ 93 (107)
T 2i45_A 67 GSMTIREGEMAVVPKSVSHRPRSENGC 93 (107)
T ss_dssp CEEEECTTEEEEECTTCCEEEEEEEEE
T ss_pred cEEEECCCCEEEECCCCcEeeEeCCCe
Confidence 467788999999999999999997655
No 37
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=88.16 E-value=0.14 Score=42.70 Aligned_cols=41 Identities=20% Similarity=0.353 Sum_probs=29.1
Q ss_pred CcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCcc
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPE 575 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 575 (632)
+..=++.=..||+++||+|.+|+.+|..+.--+.+-+++|.
T Consensus 59 ~~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~~ 99 (113)
T 2gu9_A 59 VDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHPP 99 (113)
T ss_dssp ETTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEESC
T ss_pred ECCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCC
Confidence 34446777899999999999999999864322334444554
No 38
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=88.14 E-value=0.16 Score=47.22 Aligned_cols=60 Identities=20% Similarity=0.159 Sum_probs=36.6
Q ss_pred ccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCcc
Q 006745 510 VIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPE 575 (632)
Q Consensus 510 v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 575 (632)
..|+ +.|-+|+..-.- ++-|..=++.=..||+||||+|++|+++|..+---+-+-.++|+
T Consensus 60 H~H~-~~E~~~Vl~G~~-----~v~v~g~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~ 119 (156)
T 3kgz_A 60 ERHA-HVHAVMIHRGHG-----QCLVGETISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAA 119 (156)
T ss_dssp BBCS-SCEEEEEEEEEE-----EEEETTEEEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESS
T ss_pred eeCC-CcEEEEEEeCEE-----EEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCC
Confidence 4455 345555433221 12344456777899999999999999999865322233344443
No 39
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=88.09 E-value=0.15 Score=44.05 Aligned_cols=23 Identities=35% Similarity=0.391 Sum_probs=20.2
Q ss_pred EeecCCeEEecCCCcccccccch
Q 006745 541 IQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 541 ~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
.=..||++++|||.+|+++|--+
T Consensus 62 ~l~aGd~~~~p~G~~H~~~N~g~ 84 (98)
T 2ozi_A 62 QLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CBCTTCCEEECTTCEEEEEECSS
T ss_pred EECCCCEEEECCCCceeCEECCC
Confidence 45689999999999999999765
No 40
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=87.75 E-value=0.15 Score=47.68 Aligned_cols=61 Identities=16% Similarity=0.126 Sum_probs=40.3
Q ss_pred cccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccc-hhhhhhhcccCcc
Q 006745 509 QVIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLK-SCIKAALDFVSPE 575 (632)
Q Consensus 509 ~v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLk-SCIKVAlDFVSPE 575 (632)
...|+ ++|.+|+-.-.- ++-|..=++.=..||+||||+|+||+++|.. +---+.+-+++|+
T Consensus 71 ~H~H~-~~E~~~Vl~G~~-----~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 71 LERHE-HTHVVMVVRGHA-----EVVLDDRVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp CBBCS-SCEEEEEEESEE-----EEEETTEEEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred CccCC-CcEEEEEEeCEE-----EEEECCEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 34566 677777654331 1344555778899999999999999999987 3222233345554
No 41
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=87.37 E-value=0.17 Score=52.73 Aligned_cols=40 Identities=18% Similarity=0.213 Sum_probs=33.9
Q ss_pred EEEeecCCeEEecCCCcccccccchhhhhhhcccCc-cchHH
Q 006745 539 TFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSP-ENVSQ 579 (632)
Q Consensus 539 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP-EnV~e 579 (632)
++.=+.||+||||||.||+++|.... |..+=|.++ ..++.
T Consensus 292 ~~~l~~Gd~~~iPag~~h~~~~~~~~-~~~l~~~~g~~g~~~ 332 (350)
T 1juh_A 292 ATELGSGDVAFIPGGVEFKYYSEAYF-SKVLFVSSGSDGLDQ 332 (350)
T ss_dssp CEEECTTCEEEECTTCCEEEEESSSS-EEEEEEEESSSSHHH
T ss_pred EEEeCCCCEEEECCCCCEEEEecCCe-EEEEEEecCccchhh
Confidence 56778999999999999999998766 777888888 77665
No 42
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=87.13 E-value=0.17 Score=49.71 Aligned_cols=60 Identities=18% Similarity=0.154 Sum_probs=42.2
Q ss_pred ccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCcc
Q 006745 510 VIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPE 575 (632)
Q Consensus 510 v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 575 (632)
..|| +.|.+|+..-.- ++-|..=++.=..||+|+||+|+||+++|.-.---+.+..++|-
T Consensus 162 H~H~-~~e~~~Vl~G~~-----~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p~ 221 (243)
T 3h7j_A 162 HKHR-NEQIGICIGGGY-----DMTVEGCTVEMKFGTAYFCEPREDHGAINRSEKESKSINIFFPP 221 (243)
T ss_dssp ECCS-SEEEEEECSSCE-----EEEETTEEEEECTTCEEEECTTCCEEEEECSSSCEEEEEEEESC
T ss_pred EeCC-CcEEEEEEECEE-----EEEECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcCC
Confidence 4666 577777765432 24455556778899999999999999999855444455666664
No 43
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=86.52 E-value=0.22 Score=45.53 Aligned_cols=25 Identities=24% Similarity=0.197 Sum_probs=23.3
Q ss_pred eEEEeecCCeEEecCCCcccccccc
Q 006745 538 WTFIQKLGEAVFVPAGCPHQVRNLK 562 (632)
Q Consensus 538 Wtf~Q~lGEAVFIPAGCPHQVRNLk 562 (632)
-++.=..||+|+||+|+||+++|..
T Consensus 88 ~~~~l~~Gd~i~ip~~~~H~~~n~~ 112 (163)
T 1lr5_A 88 QEIPFFQNTTFSIPVNDPHQVWNSD 112 (163)
T ss_dssp EEEEECTTEEEEECTTCCEEEECCC
T ss_pred EEEEeCCCCEEEECCCCcEEeEeCC
Confidence 7888899999999999999999986
No 44
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=86.40 E-value=0.31 Score=43.26 Aligned_cols=26 Identities=27% Similarity=0.391 Sum_probs=22.7
Q ss_pred cceEEEeecCCeEEecCCCccccccc
Q 006745 536 EPWTFIQKLGEAVFVPAGCPHQVRNL 561 (632)
Q Consensus 536 EpWtf~Q~lGEAVFIPAGCPHQVRNL 561 (632)
..=++.=..||+|+||||++|..+|.
T Consensus 75 ~g~~~~l~~GD~v~ip~g~~H~~~~~ 100 (119)
T 3lwc_A 75 DGETVTAGPGEIVYMPKGETVTIRSH 100 (119)
T ss_dssp TTEEEEECTTCEEEECTTCEEEEEEE
T ss_pred CCEEEEECCCCEEEECCCCEEEEEcC
Confidence 34467778999999999999999997
No 45
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=86.24 E-value=0.36 Score=43.51 Aligned_cols=25 Identities=32% Similarity=0.279 Sum_probs=22.0
Q ss_pred EEEeecCCeEEecCCCcccccccch
Q 006745 539 TFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 539 tf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
++.=..||+|+||+|.||+++|..+
T Consensus 89 ~~~l~~Gd~i~ip~g~~H~~~n~~~ 113 (148)
T 2oa2_A 89 QEEVFDDYAILIPAGTWHNVRNTGN 113 (148)
T ss_dssp EEEEETTCEEEECTTCEEEEEECSS
T ss_pred eEEECCCCEEEECCCCcEEEEECCC
Confidence 4777899999999999999999753
No 46
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=85.97 E-value=0.16 Score=47.52 Aligned_cols=55 Identities=9% Similarity=-0.053 Sum_probs=38.3
Q ss_pred ccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCccc
Q 006745 516 DQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576 (632)
Q Consensus 516 DQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 576 (632)
++-+|+-.--- ++.|..=++.=..||+|+||+|.||+.+|.-+.-- .+-++.|..
T Consensus 127 ~E~~~Vl~G~~-----~~~~~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~~~~ 181 (192)
T 1y9q_A 127 IEYIHVLEGIM-----KVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVAYPR 181 (192)
T ss_dssp EEEEEEEESCE-----EEEETTEEEEECTTCEEEEECSSSEEEEESSSCEE-EEEEEECCC
T ss_pred EEEEEEEEeEE-----EEEECCEEEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEecCc
Confidence 35566543321 25566677888999999999999999999854322 666676654
No 47
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=85.39 E-value=0.27 Score=42.60 Aligned_cols=29 Identities=10% Similarity=0.084 Sum_probs=24.6
Q ss_pred CCcceEEEeecCCeEEecCCCcccccccc
Q 006745 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLK 562 (632)
Q Consensus 534 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLk 562 (632)
.|..-++.=..||+|+||+|.||+.+|..
T Consensus 62 ~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~ 90 (125)
T 3cew_A 62 TIDGEKIELQAGDWLRIAPDGKRQISAAS 90 (125)
T ss_dssp EETTEEEEEETTEEEEECTTCCEEEEEBT
T ss_pred EECCEEEEeCCCCEEEECCCCcEEEEcCC
Confidence 34456778899999999999999999974
No 48
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=85.20 E-value=0.25 Score=46.42 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=41.2
Q ss_pred CCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCccch
Q 006745 512 HPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENV 577 (632)
Q Consensus 512 dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV 577 (632)
|.=+|+.+|+-+-.- +.-|..=++.=..||+||||+|++|..+|...|..+++ +.|-+.
T Consensus 81 ~~~~eE~~yVLeG~~-----~l~i~g~~~~l~~GD~i~iP~G~~h~~~n~~~a~~l~V--~~P~~~ 139 (151)
T 4axo_A 81 TLNYDEIDYVIDGTL-----DIIIDGRKVSASSGELIFIPKGSKIQFSVPDYARFIYV--TYPADW 139 (151)
T ss_dssp ECSSEEEEEEEEEEE-----EEEETTEEEEEETTCEEEECTTCEEEEEEEEEEEEEEE--EECSCC
T ss_pred eCCCcEEEEEEEeEE-----EEEECCEEEEEcCCCEEEECCCCEEEEEeCCCEEEEEE--ECCCCc
Confidence 334677777644321 12345567888999999999999999999988877665 445443
No 49
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=84.65 E-value=0.29 Score=44.51 Aligned_cols=40 Identities=18% Similarity=0.110 Sum_probs=29.2
Q ss_pred CcceEEEeecCCeEEecCC-CcccccccchhhhhhhcccCc
Q 006745 535 IEPWTFIQKLGEAVFVPAG-CPHQVRNLKSCIKAALDFVSP 574 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAG-CPHQVRNLkSCIKVAlDFVSP 574 (632)
|..=++.=..||+|+||+| ++|+++|.-.---+.+-+.+|
T Consensus 83 ~~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~~p 123 (162)
T 3l2h_A 83 MENDQYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQR 123 (162)
T ss_dssp ETTEEEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEEC
T ss_pred ECCEEEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEECC
Confidence 4445778889999999998 999999975533334444444
No 50
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=84.38 E-value=0.3 Score=47.46 Aligned_cols=49 Identities=27% Similarity=0.412 Sum_probs=36.0
Q ss_pred ccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccc-cchh
Q 006745 510 VIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRN-LKSC 564 (632)
Q Consensus 510 v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRN-LkSC 564 (632)
..|| ++|.+|+-.-.- ++.|..=++.=..||+++||||+||.++| ...|
T Consensus 169 H~H~-~~e~~~Vl~G~~-----~~~i~g~~~~l~~Gd~i~ip~~~~H~~~~~~~~~ 218 (227)
T 3rns_A 169 HKAP-GDALVTVLDGEG-----KYYVDGKPFIVKKGESAVLPANIPHAVEAETENF 218 (227)
T ss_dssp ECCS-SEEEEEEEEEEE-----EEEETTEEEEEETTEEEEECTTSCEEEECCSSCE
T ss_pred EECC-CcEEEEEEeEEE-----EEEECCEEEEECCCCEEEECCCCcEEEEeCCCCE
Confidence 4566 677777654432 24455557788899999999999999999 6654
No 51
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=84.30 E-value=0.45 Score=41.62 Aligned_cols=61 Identities=23% Similarity=0.383 Sum_probs=39.4
Q ss_pred ccCCccccccccCHHHHHHHHHHhCCcc-eEEEeecCCeEEecCCCcccccccchhhhhhhcccCccc
Q 006745 510 VIHPIHDQVFYLSSEHKAKLKQEYGIEP-WTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576 (632)
Q Consensus 510 v~dPIHDQ~fYLt~ehk~kLkEEyGVEp-Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 576 (632)
..|+-.++.+|+-.-.-. +-+.. -++.=..||+++||+|.||..+|...-. ..+-+++|..
T Consensus 59 H~H~~~~E~~~vl~G~~~-----~~~~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~~-~~l~~~~p~~ 120 (134)
T 2o8q_A 59 HTHTVGFQLFYVLRGWVE-----FEYEDIGAVMLEAGGSAFQPPGVRHRELRHSDDL-EVLEIVSPAG 120 (134)
T ss_dssp EEECCSCEEEEEEESEEE-----EEETTTEEEEEETTCEEECCTTCCEEEEEECTTC-EEEEEESSTT
T ss_pred EECCCCcEEEEEEeCEEE-----EEECCcEEEEecCCCEEEECCCCcEEeEeCCCCe-EEEEEECCCc
Confidence 355555666665443221 33344 5778899999999999999999965422 3344556654
No 52
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=83.74 E-value=0.52 Score=44.23 Aligned_cols=48 Identities=15% Similarity=0.011 Sum_probs=32.1
Q ss_pred ccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccch
Q 006745 510 VIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 510 v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
..|+ +.|-+|+-.-.- ++-|..=++.=..||+|+||+|++|+++|...
T Consensus 69 H~H~-~~E~~~Vl~G~~-----~~~v~g~~~~l~~GD~i~ip~g~~H~~~n~~~ 116 (166)
T 3jzv_A 69 ERHQ-HAHGVMILKGRG-----HAMVGRAVSAVAPYDLVTIPGWSWHQFRAPAD 116 (166)
T ss_dssp BBCS-SCEEEEEEEECE-----EEEETTEEEEECTTCEEEECTTCCEEEECCTT
T ss_pred eeCC-CcEEEEEEeCEE-----EEEECCEEEEeCCCCEEEECCCCcEEeEeCCC
Confidence 4555 355555433221 13344556777899999999999999999654
No 53
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=83.66 E-value=0.27 Score=43.11 Aligned_cols=48 Identities=19% Similarity=0.123 Sum_probs=32.7
Q ss_pred ccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccch
Q 006745 510 VIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 510 v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
..|+ ..+-+|+..-.- ++-++.=++.=..||+++||+|.||+.+|..+
T Consensus 64 H~H~-~~e~~~Vl~G~~-----~~~i~~~~~~l~~Gd~i~ip~g~~H~~~~~~~ 111 (126)
T 1vj2_A 64 HSHP-WEHEIFVLKGKL-----TVLKEQGEETVEEGFYIFVEPNEIHGFRNDTD 111 (126)
T ss_dssp ECCS-SCEEEEEEESEE-----EEECSSCEEEEETTEEEEECTTCCEEEECCSS
T ss_pred eeCC-CcEEEEEEEeEE-----EEEECCEEEEECCCCEEEECCCCcEEeEeCCC
Confidence 3455 456566544321 13344556677899999999999999999763
No 54
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=82.95 E-value=0.61 Score=40.22 Aligned_cols=57 Identities=14% Similarity=0.155 Sum_probs=35.8
Q ss_pred hCCcceEEEeecCCeEEecCCCcccccccc--hhhhhhhcccCccchHHHHHHHHHhhcCCCc
Q 006745 533 YGIEPWTFIQKLGEAVFVPAGCPHQVRNLK--SCIKAALDFVSPENVSQCVRLTEEFRLLPPN 593 (632)
Q Consensus 533 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLk--SCIKVAlDFVSPEnV~ec~rLteEfR~Lp~~ 593 (632)
+-|..=++.=..||+++||+|++|+++|.. .|.-+++ +++|+-+. .+..+...-|..
T Consensus 67 ~~i~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i-~f~~~~~~---~~~~~~~~~~~~ 125 (128)
T 4i4a_A 67 IRINDEDFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI-WWDKESTL---NFLTRLEQDHHH 125 (128)
T ss_dssp EEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEE-EECHHHHH---HHHHHHHHC---
T ss_pred EEECCEEEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE-EECHHHHH---HHHHhccccccc
Confidence 345556788899999999999999999963 2333333 34555443 455555554443
No 55
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=82.66 E-value=0.37 Score=45.86 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=30.2
Q ss_pred cceEEEeecCCeEEecCCCcccccccchhhhhhhcccCcc
Q 006745 536 EPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPE 575 (632)
Q Consensus 536 EpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 575 (632)
+.+++.=..||+|+||+|.||+.+|.-+.--+.+.+++|.
T Consensus 117 ~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 117 DAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp CEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred cEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 4567888999999999999999999765332344455554
No 56
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=82.39 E-value=0.19 Score=47.67 Aligned_cols=47 Identities=13% Similarity=0.212 Sum_probs=36.0
Q ss_pred cccCCccccccccCH--HHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccc
Q 006745 509 QVIHPIHDQVFYLSS--EHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRN 560 (632)
Q Consensus 509 ~v~dPIHDQ~fYLt~--ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRN 560 (632)
...|+-+++.||+-. -.- ++-|..=++.=+.||+|+||+|++|++++
T Consensus 60 ~H~H~~~~E~~yVLe~~G~g-----~v~idge~~~l~~GD~v~IPpg~~H~i~g 108 (157)
T 4h7l_A 60 THYHREHQEIYVVLDHAAHA-----TIELNGQSYPLTKLLAISIPPLVRHRIVG 108 (157)
T ss_dssp CBBCSSCEEEEEEEEECTTC-----EEEETTEEEECCTTEEEEECTTCCEEEES
T ss_pred ceECCCCcEEEEEEecCcEE-----EEEECCEEEEeCCCCEEEECCCCeEeeEC
Confidence 356777888888755 321 24556667888999999999999999985
No 57
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=80.88 E-value=0.54 Score=48.75 Aligned_cols=20 Identities=30% Similarity=0.504 Sum_probs=16.3
Q ss_pred EEeecCCeEEecCCCccccc
Q 006745 540 FIQKLGEAVFVPAGCPHQVR 559 (632)
Q Consensus 540 f~Q~lGEAVFIPAGCPHQVR 559 (632)
+.=++|||+|||||.||=.-
T Consensus 160 v~l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 160 IKIKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp EECCTTCEEEECTTCCEEEC
T ss_pred EEcCCCCEEEcCCCCceEec
Confidence 34468999999999999743
No 58
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=80.68 E-value=0.42 Score=48.04 Aligned_cols=51 Identities=16% Similarity=0.125 Sum_probs=39.3
Q ss_pred hCCcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCccchHHHHHHH
Q 006745 533 YGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLT 584 (632)
Q Consensus 533 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLt 584 (632)
+-|..-++.=..||.++||+|+||+.+|... --..+-+++|....+.++-.
T Consensus 252 ~~i~~~~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~~~~~~~~~~~ 302 (337)
T 1y3t_A 252 MWTDGQEIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVPGLFEPFFRTL 302 (337)
T ss_dssp EEETTEEEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEESSTTTHHHHHH
T ss_pred EEECCEEEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcCccHHHHHHHh
Confidence 4455668888999999999999999999876 33445567888887765543
No 59
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=80.20 E-value=0.41 Score=44.67 Aligned_cols=45 Identities=13% Similarity=0.184 Sum_probs=32.7
Q ss_pred cCCccccccccCHHHHHHHHHHhCCcc----eEEEeecCCeEEecCCCccccccc
Q 006745 511 IHPIHDQVFYLSSEHKAKLKQEYGIEP----WTFIQKLGEAVFVPAGCPHQVRNL 561 (632)
Q Consensus 511 ~dPIHDQ~fYLt~ehk~kLkEEyGVEp----Wtf~Q~lGEAVFIPAGCPHQVRNL 561 (632)
.||- ++.+|+-.-.- ++.|.. =++.=..||+|+||+|.||+++|.
T Consensus 137 ~h~~-~E~~~Vl~G~~-----~~~~~~~~~~~~~~l~~GD~~~~~~~~~H~~~n~ 185 (198)
T 2bnm_A 137 GHAG-NEFLFVLEGEI-----HMKWGDKENPKEALLPTGASMFVEEHVPHAFTAA 185 (198)
T ss_dssp CCSS-CEEEEEEESCE-----EEEESCTTSCEEEEECTTCEEEECTTCCEEEEES
T ss_pred cCCC-eEEEEEEeeeE-----EEEECCcCCcccEEECCCCEEEeCCCCceEEEec
Confidence 4443 56666643321 244555 678888999999999999999997
No 60
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=80.10 E-value=0.59 Score=48.12 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=15.8
Q ss_pred EEeecCCeEEecCCCcccc
Q 006745 540 FIQKLGEAVFVPAGCPHQV 558 (632)
Q Consensus 540 f~Q~lGEAVFIPAGCPHQV 558 (632)
+.=++|||+|||||.||=.
T Consensus 160 v~l~pGd~~~ipaGt~HA~ 178 (300)
T 1zx5_A 160 FETTPYDTFVIRPGIPHAG 178 (300)
T ss_dssp EECCTTCEEEECTTCCEEE
T ss_pred eECCCCCEEEcCCCCceEc
Confidence 3447899999999999963
No 61
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=79.99 E-value=0.58 Score=41.46 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=25.4
Q ss_pred hCCcceEEEeecCCeEEecCCCcccccccch
Q 006745 533 YGIEPWTFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 533 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
+-|..-++.=..||+++||+|.||+.+|.-.
T Consensus 91 ~~i~~~~~~l~~Gd~i~i~~~~~H~~~n~~~ 121 (133)
T 1o4t_A 91 FHDNGKDVPIKAGDVCFTDSGESHSIENTGN 121 (133)
T ss_dssp EEETTEEEEEETTEEEEECTTCEEEEECCSS
T ss_pred EEECCEEEEeCCCcEEEECCCCcEEeEECCC
Confidence 3345567778899999999999999999743
No 62
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=79.90 E-value=0.54 Score=46.49 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=33.3
Q ss_pred cCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccch
Q 006745 511 IHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 511 ~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
.|+-.++.+|+-.-.- ++.|..=++.=..||+||||+|+||+.+|.-.
T Consensus 196 ~H~~~~E~~~Vl~G~~-----~~~i~~~~~~l~~GD~i~~~~~~~H~~~n~g~ 243 (261)
T 1rc6_A 196 ETHVQEHGAYILSGQG-----VYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGR 243 (261)
T ss_dssp EEESSCEEEEEEESEE-----EEESSSCEEEEETTCEEEECSSEEEEEEEC--
T ss_pred cCCCceEEEEEEEeEE-----EEEECCEEEEeCCCCEEEECCCCcEEeEeCCC
Confidence 3444455666643321 35566667888999999999999999999744
No 63
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=78.86 E-value=0.65 Score=42.95 Aligned_cols=58 Identities=17% Similarity=0.084 Sum_probs=37.1
Q ss_pred CCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCC--CcccccccchhhhhhhcccCc
Q 006745 512 HPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAG--CPHQVRNLKSCIKAALDFVSP 574 (632)
Q Consensus 512 dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAG--CPHQVRNLkSCIKVAlDFVSP 574 (632)
|+-.++.+|+..-.- ++-|..=++.=..||+|+||+| .+|+++|.-+---+.+-+.+|
T Consensus 62 H~~~eE~~~Vl~G~~-----~~~~~~~~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p 121 (163)
T 3i7d_A 62 HMEQDEFVMVTEGAL-----VLVDDQGEHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTR 121 (163)
T ss_dssp ESSCCEEEEEEESCE-----EEEETTEEEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEEEC
T ss_pred CCCCcEEEEEEECEE-----EEEECCEEEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEECC
Confidence 443355566544322 1334455778889999999999 999999976543334444444
No 64
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=78.83 E-value=0.53 Score=45.71 Aligned_cols=54 Identities=11% Similarity=-0.008 Sum_probs=39.6
Q ss_pred cccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccchhhhhh
Q 006745 509 QVIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAA 568 (632)
Q Consensus 509 ~v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVA 568 (632)
...|| +++.+|+-.--- ++.|..=++.=..||.++||||.||-++|+..|+=+.
T Consensus 52 ~h~h~-~~~~~~Vl~G~~-----~~~i~~~~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~ 105 (227)
T 3rns_A 52 AEAML-GNRYYYCFNGNG-----EIFIENNKKTISNGDFLEITANHNYSIEARDNLKLIE 105 (227)
T ss_dssp ECSCS-SCEEEEEEESEE-----EEEESSCEEEEETTEEEEECSSCCEEEEESSSEEEEE
T ss_pred ccccC-CCEEEEEEeCEE-----EEEECCEEEEECCCCEEEECCCCCEEEEECCCcEEEE
Confidence 45677 888888744321 2345555677788999999999999999998875443
No 65
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=78.55 E-value=0.8 Score=43.70 Aligned_cols=39 Identities=18% Similarity=0.250 Sum_probs=29.0
Q ss_pred eEEEeecCCeEEecCCCcccccccchhhhhhhcccCccc
Q 006745 538 WTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576 (632)
Q Consensus 538 Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 576 (632)
.++.=..||+++||+|.+|.++|.-.---+.+-+.++.+
T Consensus 119 ~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~ 157 (201)
T 1fi2_A 119 YSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQN 157 (201)
T ss_dssp EEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSC
T ss_pred EEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCC
Confidence 467778899999999999999997543334444555554
No 66
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=77.83 E-value=0.74 Score=41.71 Aligned_cols=35 Identities=17% Similarity=0.128 Sum_probs=25.3
Q ss_pred EEeecCCeEEecCCCcccccccchhhhhhhcccCc
Q 006745 540 FIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSP 574 (632)
Q Consensus 540 f~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 574 (632)
+.=..||+++||+|+||+.+|....--+.+-++.|
T Consensus 89 ~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~ 123 (147)
T 2f4p_A 89 RILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQ 123 (147)
T ss_dssp EEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECC
T ss_pred EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 56689999999999999999985532233333333
No 67
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=77.75 E-value=0.78 Score=41.14 Aligned_cols=30 Identities=20% Similarity=0.225 Sum_probs=25.0
Q ss_pred EEEeecCCeEEecCCCcccccccchhhhhh
Q 006745 539 TFIQKLGEAVFVPAGCPHQVRNLKSCIKAA 568 (632)
Q Consensus 539 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVA 568 (632)
++.=..||+|+||+|.||..+|...+-|+-
T Consensus 88 ~~~l~~GD~~~ip~g~~h~~~~~~~~rK~y 117 (123)
T 3bcw_A 88 VHAVKAGDAFIMPEGYTGRWEVDRHVKKIY 117 (123)
T ss_dssp EEEEETTCEEEECTTCCCEEEEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCeEEEEECCceeEEE
Confidence 355679999999999999999998776653
No 68
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=77.07 E-value=0.81 Score=45.67 Aligned_cols=31 Identities=16% Similarity=0.322 Sum_probs=26.3
Q ss_pred hCCcceEEEeecCCeEEecCCCcccccccch
Q 006745 533 YGIEPWTFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 533 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
+-|..-++.=..||+|+||||+||+.+|.-.
T Consensus 216 ~~i~~~~~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 216 YNLDNEWYPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp EEETTEEEEEETTCEEEECTTCCEEEEEECS
T ss_pred EEECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 4555667888999999999999999999754
No 69
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=76.55 E-value=1.2 Score=42.45 Aligned_cols=29 Identities=17% Similarity=0.165 Sum_probs=24.9
Q ss_pred CcceEEEeecCCeEEecCCCcccccccch
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
|..=+|.=..||.++||||.||..+|.-+
T Consensus 125 l~g~~~~L~~Gds~~iP~g~~H~~~N~~d 153 (166)
T 2vpv_A 125 VCKNKFLSVKGSTFQIPAFNEYAIANRGN 153 (166)
T ss_dssp ETTEEEEEETTCEEEECTTCEEEEEECSS
T ss_pred ECCEEEEEcCCCEEEECCCCCEEEEECCC
Confidence 44557888899999999999999999764
No 70
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=75.86 E-value=0.78 Score=44.92 Aligned_cols=48 Identities=21% Similarity=0.145 Sum_probs=35.0
Q ss_pred ccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEE-ecCCCcccccccch
Q 006745 510 VIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVF-VPAGCPHQVRNLKS 563 (632)
Q Consensus 510 v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVF-IPAGCPHQVRNLkS 563 (632)
..|| +.|-+|+-.-.- ++-|..=++.=..||+|| ||+|+||+++|...
T Consensus 50 H~H~-~~e~~~Vl~G~~-----~~~~~~~~~~l~~Gd~i~~ip~~~~H~~~n~~~ 98 (243)
T 3h7j_A 50 HQHK-EVQIGMVVSGEL-----MMTVGDVTRKMTALESAYIAPPHVPHGARNDTD 98 (243)
T ss_dssp ECCS-SEEEEEEEESEE-----EEEETTEEEEEETTTCEEEECTTCCEEEEECSS
T ss_pred EECC-CcEEEEEEEeEE-----EEEECCEEEEECCCCEEEEcCCCCcEeeEeCCC
Confidence 4566 677777654331 234445567778999997 99999999999876
No 71
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=75.81 E-value=0.93 Score=48.47 Aligned_cols=17 Identities=41% Similarity=0.559 Sum_probs=15.1
Q ss_pred EeecCCeEEecCCCccc
Q 006745 541 IQKLGEAVFVPAGCPHQ 557 (632)
Q Consensus 541 ~Q~lGEAVFIPAGCPHQ 557 (632)
.=++|||+|||||.||=
T Consensus 243 ~l~pGd~~fipAG~~HA 259 (394)
T 2wfp_A 243 KLNPGEAMFLFAETPHA 259 (394)
T ss_dssp EECTTCEEEECTTCCEE
T ss_pred ECCCCCEEEcCCCCceE
Confidence 34789999999999996
No 72
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=75.43 E-value=0.96 Score=46.12 Aligned_cols=29 Identities=14% Similarity=0.272 Sum_probs=22.9
Q ss_pred hCCcceEEEeecCCeEEecCCCccccccc
Q 006745 533 YGIEPWTFIQKLGEAVFVPAGCPHQVRNL 561 (632)
Q Consensus 533 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNL 561 (632)
|.+..=.+.=+.||++|||+||||+..|.
T Consensus 220 y~l~~~~~~V~~GD~i~~~~~~~h~~~n~ 248 (266)
T 4e2q_A 220 YRLGDNWYPVQAGDVIWMAPFVPQWYAAL 248 (266)
T ss_dssp EEETTEEEEEETTCEEEECTTCCEEEEEE
T ss_pred EEECCEEEEecCCCEEEECCCCcEEEEeC
Confidence 33444455667899999999999999986
No 73
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=75.42 E-value=0.86 Score=41.23 Aligned_cols=35 Identities=26% Similarity=0.312 Sum_probs=28.3
Q ss_pred CcceEEEeecCCeEEecCCCcccccccchhhhhhh
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAAL 569 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 569 (632)
+..=++.=+.||+++||+|.||..+|...|.++.+
T Consensus 90 ~~g~~~~l~~GD~i~~p~g~~h~~~~~~~~~~l~v 124 (133)
T 2pyt_A 90 HEGETMIAKAGDVMFIPKGSSIEFGTPTSVRFLYV 124 (133)
T ss_dssp ETTEEEEEETTCEEEECTTCEEEEEEEEEEEEEEE
T ss_pred ECCEEEEECCCcEEEECCCCEEEEEeCCCEEEEEE
Confidence 34556778899999999999999999877766543
No 74
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=73.98 E-value=1.1 Score=48.69 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=22.4
Q ss_pred HHHHHHHHhCCcce---------EEEeecCCeEEecCCCccc
Q 006745 525 HKAKLKQEYGIEPW---------TFIQKLGEAVFVPAGCPHQ 557 (632)
Q Consensus 525 hk~kLkEEyGVEpW---------tf~Q~lGEAVFIPAGCPHQ 557 (632)
.-.+|.+.|.-.+= .+.=++|||+|||||.||=
T Consensus 244 ~i~~L~~~yP~D~G~~~~~~lLN~v~L~pGea~flpAg~~HA 285 (440)
T 1pmi_A 244 LIQRLNKQFPNDIGLFCGCLLLNHVGLNKGEAMFLQAKDPHA 285 (440)
T ss_dssp HHHHHHHHSTTCTHHHHTTTTEEEEEECTTCEEEECTTCCEE
T ss_pred HHHHHHHHCCCCccceehhhhcceEecCCCCEEecCCCCccc
Confidence 34556677752211 2335789999999999995
No 75
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=73.85 E-value=0.87 Score=45.72 Aligned_cols=50 Identities=18% Similarity=0.311 Sum_probs=36.5
Q ss_pred hCCcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCccchHHHHHH
Q 006745 533 YGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRL 583 (632)
Q Consensus 533 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rL 583 (632)
+.|..-++.=..||.|+||+|.||..+|...- -..+.+++|....+-++-
T Consensus 80 ~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~-~~~~~~~~p~~~~~~~~~ 129 (337)
T 1y3t_A 80 LTLDGERYLLISGDYANIPAGTPHSYRMQSHR-TRLVSYTMKGNVAHLYSV 129 (337)
T ss_dssp EEETTEEEEECTTCEEEECTTCCEEEEECSTT-EEEEEEEETTSSTHHHHH
T ss_pred EEECCEEEEECCCCEEEECCCCcEEEEECCCC-eEEEEEECCCCHHHHHHH
Confidence 33456678888999999999999999998662 234555677776665433
No 76
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=73.20 E-value=0.8 Score=47.68 Aligned_cols=71 Identities=15% Similarity=0.138 Sum_probs=50.9
Q ss_pred ccCCccccccccCHHHHHHHHHHhCCcc-----eEEEeecCCeEEecCCCcccccccchhhhhhhcccCccchHHHHHHH
Q 006745 510 VIHPIHDQVFYLSSEHKAKLKQEYGIEP-----WTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLT 584 (632)
Q Consensus 510 v~dPIHDQ~fYLt~ehk~kLkEEyGVEp-----Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLt 584 (632)
..|+-.++.||+-.-.- ++-|.. -++.=..||.|+||+|.||..+|.-.-. ..+-.++|....+.++-.
T Consensus 66 H~H~~~~E~~~Vl~G~~-----~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~p~~~~~~f~~l 139 (350)
T 1juh_A 66 HIHQKHYENFYCNKGSF-----QLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIVPGGFEDLFYYL 139 (350)
T ss_dssp EECSSCEEEEEEEESEE-----EEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEESSCTTHHHHHH
T ss_pred ccCCCceEEEEEEEEEE-----EEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEcCccHHHHHHHh
Confidence 45666667777644321 234555 7888899999999999999999986544 667788898877766554
Q ss_pred HH
Q 006745 585 EE 586 (632)
Q Consensus 585 eE 586 (632)
.+
T Consensus 140 ~~ 141 (350)
T 1juh_A 140 GT 141 (350)
T ss_dssp SE
T ss_pred cc
Confidence 43
No 77
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=72.53 E-value=1.8 Score=47.00 Aligned_cols=30 Identities=27% Similarity=0.457 Sum_probs=27.5
Q ss_pred hCCcceEEEeecCCeEEecCCCcccccccc
Q 006745 533 YGIEPWTFIQKLGEAVFVPAGCPHQVRNLK 562 (632)
Q Consensus 533 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLk 562 (632)
+|...+.++=.+||+.|||+|.+|+|+.+.
T Consensus 194 ~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 194 IGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp SCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred cCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 566778999999999999999999999986
No 78
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=71.11 E-value=1.9 Score=40.58 Aligned_cols=27 Identities=26% Similarity=0.343 Sum_probs=23.3
Q ss_pred ceEEEeecCCeEEecCCCcccccccch
Q 006745 537 PWTFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 537 pWtf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
.-++.=..||+++||+|.||..+|.-.
T Consensus 82 ~~~~~l~~GDv~~~P~g~~H~~~N~g~ 108 (178)
T 1dgw_A 82 RDTYKLDQGDAIKIQAGTPFYLINPDN 108 (178)
T ss_dssp EEEEEEETTEEEEECTTCCEEEEECCS
T ss_pred cEEEEECCCCEEEECCCCeEEEEeCCC
Confidence 446777899999999999999999854
No 79
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=70.55 E-value=1.9 Score=43.46 Aligned_cols=42 Identities=19% Similarity=0.368 Sum_probs=30.4
Q ss_pred ccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCcccccccc
Q 006745 516 DQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLK 562 (632)
Q Consensus 516 DQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLk 562 (632)
++.+|+-.-.- ++.|..=++.=..||+++||||.||+++|.-
T Consensus 91 eE~~~Vl~G~l-----~v~v~g~~~~L~~GD~i~ip~~~~H~~~N~g 132 (278)
T 1sq4_A 91 EAVLFVVEGEL-----SLTLQGQVHAMQPGGYAFIPPGADYKVRNTT 132 (278)
T ss_dssp EEEEEEEESCE-----EEEESSCEEEECTTEEEEECTTCCEEEECCS
T ss_pred eEEEEEEeCEE-----EEEECCEEEEECCCCEEEECCCCcEEEEECC
Confidence 55566533321 2344556788889999999999999999984
No 80
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=68.95 E-value=2.2 Score=45.43 Aligned_cols=27 Identities=19% Similarity=0.208 Sum_probs=24.8
Q ss_pred CcceEEEeecCCeEEecCCCccccccc
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNL 561 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNL 561 (632)
|.+=++.=..||+|+||+|+.|+++|-
T Consensus 139 vdG~~~~~~~GD~v~iP~g~~H~~~N~ 165 (368)
T 3nw4_A 139 VNGDPVRMSRGDLLLTPGWCFHGHMND 165 (368)
T ss_dssp ETTEEEEEETTCEEEECTTCCEEEEEC
T ss_pred ECCEEEEEeCCCEEEECCCCcEEeEeC
Confidence 577789999999999999999999995
No 81
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=68.66 E-value=1.8 Score=44.34 Aligned_cols=52 Identities=17% Similarity=0.221 Sum_probs=34.7
Q ss_pred EEEeecCCeEEecCCCcccccccchhhhhhhcccCccchHHHHHHHHHhhcCC
Q 006745 539 TFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLP 591 (632)
Q Consensus 539 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteEfR~Lp 591 (632)
++.=..||+++||+|+||+.+|.-+---+.+-+++|.+... +.+++=++.+|
T Consensus 279 ~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~ 330 (361)
T 2vqa_A 279 VSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQS-IDLSTWLASNP 330 (361)
T ss_dssp EEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCC-EEHHHHHHTSC
T ss_pred EEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcce-eeHHHHhhhCC
Confidence 56778899999999999999998543224455556654322 23444566666
No 82
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=68.23 E-value=2.2 Score=45.73 Aligned_cols=29 Identities=21% Similarity=0.020 Sum_probs=26.0
Q ss_pred CCcceEEEeecCCeEEecCCCcccccccc
Q 006745 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLK 562 (632)
Q Consensus 534 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLk 562 (632)
-|.+-+|.-..||+||||+|++||+.|.-
T Consensus 328 ~V~ge~~~~~~GD~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 328 IVGGKRFDWSEHDIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp EETTEEEEECTTCEEEECTTCCEEEEECC
T ss_pred EECCEEEEEeCCCEEEECCCCeEEeEeCC
Confidence 45778899999999999999999999964
No 83
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=67.98 E-value=1.6 Score=45.70 Aligned_cols=40 Identities=15% Similarity=-0.024 Sum_probs=30.0
Q ss_pred CcceEEEeecCCeEEecCCCcccccccchhhhhhhcccCc
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSP 574 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 574 (632)
|.+-++.=..||+|+||+|.+|+.+|.-.---+-++|..|
T Consensus 136 v~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~d~ 175 (354)
T 2d40_A 136 VDGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGLDL 175 (354)
T ss_dssp ETTEEEECCTTCEEEECTTSCEEEECCSSSCEEEEEEECH
T ss_pred ECCEEEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEECc
Confidence 5566788899999999999999999985422233555544
No 84
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=67.73 E-value=2 Score=47.48 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=33.0
Q ss_pred hCCcceEEEeecCCeEEecCCCcccccccch--hhhhhhcccC
Q 006745 533 YGIEPWTFIQKLGEAVFVPAGCPHQVRNLKS--CIKAALDFVS 573 (632)
Q Consensus 533 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS--CIKVAlDFVS 573 (632)
.+-..+.++-.+||..|||.|.+|||+++.. +|.++.-+-.
T Consensus 223 ~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~ 265 (489)
T 4diq_A 223 LGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQ 265 (489)
T ss_dssp CCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEECT
T ss_pred ccCcceEEEECCCCEEEECCCCceEEEecCCCceEEEeecccC
Confidence 3567789999999999999999999999953 5556555543
No 85
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=67.54 E-value=1.8 Score=42.68 Aligned_cols=31 Identities=19% Similarity=0.206 Sum_probs=25.6
Q ss_pred CCcceEEEeecCCeEEecCCCcccccccchh
Q 006745 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSC 564 (632)
Q Consensus 534 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSC 564 (632)
.|..=++.=..||+++||||.||+++|...|
T Consensus 82 ~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~ 112 (246)
T 1sfn_A 82 AVGGETRTLREYDYVYLPAGEKHMLTAKTDA 112 (246)
T ss_dssp ECSSCEEEECTTEEEEECTTCCCEEEEEEEE
T ss_pred EECCEEEEECCCCEEEECCCCCEEEEeCCCE
Confidence 3455567778999999999999999998544
No 86
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=65.49 E-value=2.2 Score=42.04 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=25.8
Q ss_pred HhCCcceEEEeecCCeEEecCCCcccccccc
Q 006745 532 EYGIEPWTFIQKLGEAVFVPAGCPHQVRNLK 562 (632)
Q Consensus 532 EyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLk 562 (632)
+|-+..=++.=..||.+|++|||||+.+|.-
T Consensus 198 ~~~~~~~~~~l~~GD~~~~~~~~pH~~~n~g 228 (246)
T 1sfn_A 198 LYKLEENYYPVTAGDIIWMGAHCPQWYGALG 228 (246)
T ss_dssp EEEETTEEEEEETTCEEEECTTCCEEEEEES
T ss_pred EEEECCEEEEcCCCCEEEECCCCCEEEEcCC
Confidence 3556666678889999999999999999964
No 87
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=63.56 E-value=3.2 Score=40.93 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=25.0
Q ss_pred CCcceEEEeecCCeEEecCCCcccccccch
Q 006745 534 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 534 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
-|..=++.=..||++++|||.||+.+|.-+
T Consensus 95 ~~~~~~~~L~~Gd~~~~~~~~~H~~~N~~~ 124 (261)
T 1rc6_A 95 KAEGKTFALSEGGYLYCPPGSLMTFVNAQA 124 (261)
T ss_dssp EETTEEEEEETTEEEEECTTCCCEEEECSS
T ss_pred EECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 344557788899999999999999999843
No 88
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=63.49 E-value=3.3 Score=42.86 Aligned_cols=27 Identities=30% Similarity=0.445 Sum_probs=23.3
Q ss_pred ceEEEeecCCeEEecCCCcccccccch
Q 006745 537 PWTFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 537 pWtf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
.-++.=..||+++||+|+||+++|.-+
T Consensus 300 ~~~~~l~~GD~~~ip~~~~H~~~n~~~ 326 (385)
T 1j58_A 300 ARTFNYQAGDVGYVPFAMGHYVENIGD 326 (385)
T ss_dssp EEEEEEESSCEEEECTTCBEEEEECSS
T ss_pred EEEEEEcCCCEEEECCCCeEEEEECCC
Confidence 456777899999999999999999754
No 89
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=62.86 E-value=2.6 Score=42.04 Aligned_cols=31 Identities=10% Similarity=-0.021 Sum_probs=25.6
Q ss_pred hCCcceEEEeecCCeEEecCCCcccccccch
Q 006745 533 YGIEPWTFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 533 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
..|..=++.=..||++++|||.||+.+|.-+
T Consensus 97 ~~~~~~~~~L~~GD~~~~~~~~~H~~~N~~~ 127 (274)
T 1sef_A 97 VSDGQETHELEAGGYAYFTPEMKMYLANAQE 127 (274)
T ss_dssp EECSSCEEEEETTEEEEECTTSCCEEEESSS
T ss_pred EEECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 3445557788899999999999999999843
No 90
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=59.88 E-value=4 Score=39.13 Aligned_cols=37 Identities=16% Similarity=0.130 Sum_probs=25.7
Q ss_pred EEEeecCCeEEecCCCcccccccchhhhhhhcccCcc
Q 006745 539 TFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPE 575 (632)
Q Consensus 539 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 575 (632)
++.=..||.|+||||.||...+-..--=+|+.|-+++
T Consensus 123 ~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~ 159 (179)
T 1zrr_A 123 QVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP 159 (179)
T ss_dssp EEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG
T ss_pred EEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC
Confidence 5667899999999999999887655222334444433
No 91
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=59.77 E-value=2.8 Score=41.77 Aligned_cols=46 Identities=20% Similarity=0.387 Sum_probs=31.3
Q ss_pred ccCCccccccccCHHHHHHHHHHhCCc-ceEEEeecCCeEEecCCCccccccc
Q 006745 510 VIHPIHDQVFYLSSEHKAKLKQEYGIE-PWTFIQKLGEAVFVPAGCPHQVRNL 561 (632)
Q Consensus 510 v~dPIHDQ~fYLt~ehk~kLkEEyGVE-pWtf~Q~lGEAVFIPAGCPHQVRNL 561 (632)
..|| ++|.+|+=... -||.|+ .=++.=..||.||||+|.||.+|+.
T Consensus 148 HsHp-~EEiy~VLsG~-----~e~~v~~g~~~~l~pGd~v~ipsgv~Ha~rt~ 194 (217)
T 4b29_A 148 HEHL-PEELYSVVSGR-----ALFHLRNAPDLMLEPGQTRFHPANAPHAMTTL 194 (217)
T ss_dssp EECS-SEEEEEEEEEC-----EEEEETTSCCEEECTTCEEEECTTCCEEEECC
T ss_pred CCCC-CceEEEEEeCC-----EEEEECCCCEEecCCCCEEEcCCCCceeEEEC
Confidence 3676 56655542211 135555 4556678999999999999999864
No 92
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=58.57 E-value=2.7 Score=40.13 Aligned_cols=36 Identities=17% Similarity=0.030 Sum_probs=26.0
Q ss_pred eEEEeecCCeEEecCCCcccccccchhhhhhhcccCc
Q 006745 538 WTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSP 574 (632)
Q Consensus 538 Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 574 (632)
=++.=+.||++ ||+|.||+.+|.-.---..+-.++|
T Consensus 118 e~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~P 153 (172)
T 3es1_A 118 AKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILIE 153 (172)
T ss_dssp CEEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEEE
T ss_pred eEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEcC
Confidence 35667899999 9999999999986543333434444
No 93
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=58.55 E-value=4.5 Score=42.23 Aligned_cols=27 Identities=19% Similarity=0.085 Sum_probs=24.4
Q ss_pred CcceEEEeecCCeEEecCCCccccccc
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNL 561 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNL 561 (632)
|.+-+|.=..||+++||+|++||++|-
T Consensus 303 v~~~~~~~~~GD~~~vP~~~~H~~~n~ 329 (354)
T 2d40_A 303 IGNETFSFSAKDIFVVPTWHGVSFQTT 329 (354)
T ss_dssp ETTEEEEEETTCEEEECTTCCEEEEEE
T ss_pred ECCEEEEEcCCCEEEECCCCeEEEEeC
Confidence 457889999999999999999999994
No 94
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=55.07 E-value=5 Score=40.95 Aligned_cols=25 Identities=16% Similarity=0.214 Sum_probs=22.5
Q ss_pred eEEEeecCCeEEecCCCcccccccc
Q 006745 538 WTFIQKLGEAVFVPAGCPHQVRNLK 562 (632)
Q Consensus 538 Wtf~Q~lGEAVFIPAGCPHQVRNLk 562 (632)
-++.=..||+++||+|.+|..+|.-
T Consensus 96 ~~~~l~~GD~~~ip~g~~H~~~n~~ 120 (361)
T 2vqa_A 96 EIADVDKGGLWYFPRGWGHSIEGIG 120 (361)
T ss_dssp EEEEEETTEEEEECTTCEEEEEECS
T ss_pred EEEEEcCCCEEEECCCCeEEEEeCC
Confidence 5677788999999999999999985
No 95
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=54.62 E-value=6.2 Score=34.65 Aligned_cols=30 Identities=17% Similarity=0.287 Sum_probs=24.1
Q ss_pred hCCcceEEEeecCCeEEecCCCcccccccc
Q 006745 533 YGIEPWTFIQKLGEAVFVPAGCPHQVRNLK 562 (632)
Q Consensus 533 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLk 562 (632)
+-|..=++.=..||++|||+|.+|+.++-.
T Consensus 51 ~~i~~~~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 51 VKNQGREFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp EEETTEEEEECTTCEEEECTTCCEEEEECT
T ss_pred EEECCEEEEecCCeEEEEcCCCCEEEEeCC
Confidence 345555677789999999999999988753
No 96
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=54.36 E-value=5.5 Score=42.67 Aligned_cols=27 Identities=15% Similarity=0.113 Sum_probs=24.7
Q ss_pred CCcceEEEeecCCeEEecCCCcccccc
Q 006745 534 GIEPWTFIQKLGEAVFVPAGCPHQVRN 560 (632)
Q Consensus 534 GVEpWtf~Q~lGEAVFIPAGCPHQVRN 560 (632)
-|.+=++.-..||+|+||+|+.|+++|
T Consensus 158 ~v~G~~~~~~~GD~i~~P~g~~H~~~N 184 (394)
T 3bu7_A 158 IVDGHKVELGANDFVLTPNGTWHEHGI 184 (394)
T ss_dssp EETTEEEEECTTCEEEECTTCCEEEEE
T ss_pred EECCEEEEEcCCCEEEECcCCCEEEEc
Confidence 456679999999999999999999999
No 97
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=53.66 E-value=4.8 Score=41.00 Aligned_cols=24 Identities=8% Similarity=0.235 Sum_probs=21.0
Q ss_pred EEEeecCCeEEecCCCcccccccc
Q 006745 539 TFIQKLGEAVFVPAGCPHQVRNLK 562 (632)
Q Consensus 539 tf~Q~lGEAVFIPAGCPHQVRNLk 562 (632)
++.=..||++++|||++||++|-.
T Consensus 110 ~~~L~~Gds~y~p~~~~H~~~N~~ 133 (266)
T 4e2q_A 110 SKKLTVDSYAYLPPNFHHSLDCVE 133 (266)
T ss_dssp CEEECTTEEEEECTTCCCEEEESS
T ss_pred EEEEcCCCEEEECCCCCEEEEeCC
Confidence 466778999999999999999953
No 98
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=53.23 E-value=3.4 Score=45.44 Aligned_cols=35 Identities=17% Similarity=0.268 Sum_probs=25.6
Q ss_pred EeecCCeEEecCCCcccccccchhhhhhhcccCcc
Q 006745 541 IQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPE 575 (632)
Q Consensus 541 ~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 575 (632)
.=+.||+|+||||.||-..|.-+--=+++-++.+-
T Consensus 116 ~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~ 150 (493)
T 2d5f_A 116 HFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTS 150 (493)
T ss_dssp EEETTEEEEECTTCCEEEEECSSSCEEEEEEECTT
T ss_pred EecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCc
Confidence 34679999999999999999876444444444433
No 99
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=53.02 E-value=5.7 Score=39.95 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=25.8
Q ss_pred HhCCcceEEEeecCCeEEecCCCcccccccc
Q 006745 532 EYGIEPWTFIQKLGEAVFVPAGCPHQVRNLK 562 (632)
Q Consensus 532 EyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLk 562 (632)
+|-+..=++.=..||.+|+|+||||+.+|.-
T Consensus 224 ~~~~~~~~~~v~~GD~~~~~~~~~h~~~n~g 254 (278)
T 1sq4_A 224 VYRLNQDWVEVEAGDFMWLRAFCPQACYSGG 254 (278)
T ss_dssp EEEETTEEEEEETTCEEEEEESCCEEEECCS
T ss_pred EEEECCEEEEeCCCCEEEECCCCCEEEEcCC
Confidence 3556666777889999999999999999964
No 100
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=51.15 E-value=5.7 Score=38.61 Aligned_cols=37 Identities=19% Similarity=0.235 Sum_probs=27.1
Q ss_pred EEEeecCCeEEecCCCcccccccchhhhhhhcccCcc
Q 006745 539 TFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPE 575 (632)
Q Consensus 539 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 575 (632)
++.=..||.|+||||.||...+-.+--=+|+.|-+++
T Consensus 128 ~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~ 164 (191)
T 1vr3_A 128 RISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGE 164 (191)
T ss_dssp EEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSS
T ss_pred EEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCC
Confidence 6777899999999999999877554323355555554
No 101
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=49.99 E-value=3.6 Score=44.89 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=26.1
Q ss_pred EeecCCeEEecCCCcccccccchhhhhhhcccCccc
Q 006745 541 IQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576 (632)
Q Consensus 541 ~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 576 (632)
.=+.||+++||||.||-..|.-+--=+++-++++.|
T Consensus 130 ~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n 165 (459)
T 2e9q_A 130 PFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRN 165 (459)
T ss_dssp EEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSS
T ss_pred EecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCC
Confidence 345799999999999999999764444554444433
No 102
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=46.70 E-value=4.7 Score=44.65 Aligned_cols=35 Identities=20% Similarity=0.259 Sum_probs=26.5
Q ss_pred eecCCeEEecCCCcccccccchhhhhhhcccCccc
Q 006745 542 QKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576 (632)
Q Consensus 542 Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 576 (632)
=+.||+|+||||.||-..|.-+--=||+-++.+-|
T Consensus 130 v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n 164 (510)
T 3c3v_A 130 FNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNN 164 (510)
T ss_dssp ECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTB
T ss_pred ecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCC
Confidence 35699999999999999999765445554455554
No 103
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=44.29 E-value=6.8 Score=37.68 Aligned_cols=39 Identities=13% Similarity=0.131 Sum_probs=31.2
Q ss_pred EEEeecCCeEEecCCCcccccccchhhhhhhcccCccchHH
Q 006745 539 TFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQ 579 (632)
Q Consensus 539 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~e 579 (632)
.++..+||.|.||.|.+|...|.... |.++=||+-|-.+
T Consensus 120 ~i~L~pGesvtIppg~~H~f~ageeg--vli~EvSt~~dDe 158 (175)
T 2y0o_A 120 EIELEPGGQYTIPPNTKHWFQAGEEG--AVVTEMSSTSTDK 158 (175)
T ss_dssp EEEECTTCEEEECTTCCEEEEEEEEE--EEEEEEEECCCGG
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCC--EEEEEEeCCCCCC
Confidence 35899999999999999999996555 5667777766554
No 104
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=43.74 E-value=5.5 Score=43.62 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=23.1
Q ss_pred EEEeecCCeEEecCCCcccccccchhhhhh
Q 006745 539 TFIQKLGEAVFVPAGCPHQVRNLKSCIKAA 568 (632)
Q Consensus 539 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVA 568 (632)
+..=+.||+|+||||.+|-..|.-+--=++
T Consensus 114 ~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~ 143 (476)
T 1fxz_A 114 IYNFREGDLIAVPTGVAWWMYNNEDTPVVA 143 (476)
T ss_dssp EEEECTTEEEEECTTCEEEEEECSSSCEEE
T ss_pred EEEEeCCCEEEECCCCcEEEEeCCCCCEEE
Confidence 344567999999999999999997533333
No 105
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=41.94 E-value=6.7 Score=37.01 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=27.8
Q ss_pred ecCCeEEecCCCcccccccc----hhhhhh-----hcccCcc
Q 006745 543 KLGEAVFVPAGCPHQVRNLK----SCIKAA-----LDFVSPE 575 (632)
Q Consensus 543 ~lGEAVFIPAGCPHQVRNLk----SCIKVA-----lDFVSPE 575 (632)
..||.+++|+|.+|++.+.. -||-++ +-|+.|.
T Consensus 85 ~aGd~~~~P~g~~H~~~a~~~~~~gci~l~v~~GpL~~~~~~ 126 (165)
T 3cjx_A 85 TAGCYLYEPGGSIHQFNTPRDNEGQTEVIFMLSGCNVNFTQD 126 (165)
T ss_dssp ETTEEEEECTTCEECEECCTTCSSCEEEEEEEESCEEEECTT
T ss_pred CCCeEEEeCCCCceeeEeCCCCCCCcEEEEEEeccceecCCC
Confidence 68999999999999999988 787777 5666654
No 106
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=40.96 E-value=11 Score=38.82 Aligned_cols=48 Identities=19% Similarity=0.301 Sum_probs=33.3
Q ss_pred ccCCccccccccCHHHHHHHHHHhCC---cc--eEEEeecCCeEEecCCCcccccccch
Q 006745 510 VIHPIHDQVFYLSSEHKAKLKQEYGI---EP--WTFIQKLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 510 v~dPIHDQ~fYLt~ehk~kLkEEyGV---Ep--Wtf~Q~lGEAVFIPAGCPHQVRNLkS 563 (632)
..|| ..+-+|+..-.- ++.| .+ .++.=..||.++||+|.+|.++|...
T Consensus 95 H~H~-~~E~~~Vl~G~~-----~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~ 147 (385)
T 1j58_A 95 HWHK-EAEWAYMIYGSA-----RVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEE 147 (385)
T ss_dssp EEES-SCEEEEEEEEEE-----EEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEE
T ss_pred ccCC-hheEEEEEeeeE-----EEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCC
Confidence 4666 667666544321 1333 22 25677899999999999999999865
No 107
>1vq8_T 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_T* 1vq5_T* 1vq6_T* 1vq7_T* 1s72_T* 1vq9_T* 1vqk_T* 1vql_T* 1vqm_T* 1vqn_T* 1vqo_T* 1vqp_T* 1yhq_T* 1yi2_T* 1yij_T* 1yit_T* 1yj9_T* 1yjn_T* 1yjw_T* 2otj_T* ...
Probab=39.81 E-value=9 Score=34.92 Aligned_cols=41 Identities=27% Similarity=0.413 Sum_probs=35.8
Q ss_pred CCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCC
Q 006745 512 HPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGC 554 (632)
Q Consensus 512 dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGC 554 (632)
=|.|...-.+.+.+-+.|+++|||.-|.| +-||-|.|=||=
T Consensus 15 Ap~h~rrk~msa~LskeLr~ky~vr~~~I--kkGD~V~Vi~G~ 55 (120)
T 1vq8_T 15 APLHERHKQVRATLSADLREEYGQRNVRV--NAGDTVEVLRGD 55 (120)
T ss_dssp CCGGGSGGGGEEEECHHHHHHHTCSEEEC--CTTCEEEECSST
T ss_pred CCcchhhheeeCcCCHHHHHhhccccccc--cCCCEEEEEecC
Confidence 48899999998888889999999998875 679999999983
No 108
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=38.34 E-value=9 Score=41.94 Aligned_cols=102 Identities=11% Similarity=-0.003 Sum_probs=52.8
Q ss_pred CCCcceeeeecCCChHHHHHHHHHHHHhhcccccCCCCcccCCccccccccCHHHHH-HHHHHhCCcceEEEeecCCeEE
Q 006745 471 ADGGAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKA-KLKQEYGIEPWTFIQKLGEAVF 549 (632)
Q Consensus 471 ~~~GAlWDIFrreDv~KLreyL~kh~~Efrh~~~~pv~~v~dPIHDQ~fYLt~ehk~-kLkEEyGVEpWtf~Q~lGEAVF 549 (632)
..+|.+.-+... +.|-|.. |.--...+.-.-+.-+....||-.++.+|+..-.-+ .+-.+-|-+-.+..=..||.++
T Consensus 317 ~~gG~v~~~~~~-~~P~L~~-l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~v 394 (476)
T 1fxz_A 317 PQAGSVTTATSL-DFPALSW-LRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLI 394 (476)
T ss_dssp TTTEEEEEECTT-TSGGGTT-TTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCeEEEEeccc-cCccccc-CcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEE
Confidence 456777666653 5565431 000001111111222345678877888777654311 1111122222333367899999
Q ss_pred ecCCCcccccccchhhhhhhcccCc
Q 006745 550 VPAGCPHQVRNLKSCIKAALDFVSP 574 (632)
Q Consensus 550 IPAGCPHQVRNLkSCIKVAlDFVSP 574 (632)
||+|.||.+.|...-+.+..=|+|+
T Consensus 395 iP~G~~H~~~ng~~~l~~l~f~~s~ 419 (476)
T 1fxz_A 395 VPQNFVVAARSQSDNFEYVSFKTND 419 (476)
T ss_dssp ECTTCEEEEEECSTTEEEEEEESSS
T ss_pred ECCCCeEEEEeCCCCEEEEEEECCC
Confidence 9999999999954444433333354
No 109
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=37.73 E-value=14 Score=39.61 Aligned_cols=46 Identities=20% Similarity=0.231 Sum_probs=33.3
Q ss_pred cCCccccccccCHHHHHHHHHHhCC----cceEEEeecCCeEEecCCCccccccc
Q 006745 511 IHPIHDQVFYLSSEHKAKLKQEYGI----EPWTFIQKLGEAVFVPAGCPHQVRNL 561 (632)
Q Consensus 511 ~dPIHDQ~fYLt~ehk~kLkEEyGV----EpWtf~Q~lGEAVFIPAGCPHQVRNL 561 (632)
+||=.++.+|+-.-.- .+|| ...++.=..||+++||+|.+|-+.|.
T Consensus 65 Hh~~a~E~~yVl~G~g-----~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~ 114 (416)
T 1uij_A 65 HHADADFLLFVLSGRA-----ILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNP 114 (416)
T ss_dssp EEESEEEEEEEEESCE-----EEEEECSSCEEEEEECTTEEEEECTTCEEEEEEC
T ss_pred ccCCCceEEEEEeeEE-----EEEEEECCCCeEEEecCCCEEEECCCCeEEEEec
Confidence 3665666666654321 1333 45677788999999999999999998
No 110
>3j21_U 50S ribosomal protein L24P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=36.76 E-value=11 Score=34.39 Aligned_cols=39 Identities=21% Similarity=0.456 Sum_probs=34.9
Q ss_pred CccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCC
Q 006745 513 PIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAG 553 (632)
Q Consensus 513 PIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAG 553 (632)
|.|...-++.+.+=+.|+++|||.-|.| +-||-|.|=+|
T Consensus 19 p~h~r~k~msa~LSkeLR~ky~~r~~~I--kkGD~V~Vi~G 57 (121)
T 3j21_U 19 PLHVRQKLMSAPLSRELREKYKVRNLPV--RVGDKVRIMRG 57 (121)
T ss_dssp CTTGGGGGSEEEBCHHHHHHTCCSEEEC--CSSSEEEECSS
T ss_pred CcchhhhhhcCcCCHHHHHHhCCccccc--ccCCEEEEeec
Confidence 7788888888888889999999999987 57999999888
No 111
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=33.03 E-value=12 Score=40.42 Aligned_cols=26 Identities=27% Similarity=0.328 Sum_probs=23.3
Q ss_pred ceEEEeecCCeEEecCCCcccccccc
Q 006745 537 PWTFIQKLGEAVFVPAGCPHQVRNLK 562 (632)
Q Consensus 537 pWtf~Q~lGEAVFIPAGCPHQVRNLk 562 (632)
..++.=..||+++||+|.+|.+.|.-
T Consensus 102 ~~~~~l~~GDv~~iP~G~~H~~~N~g 127 (434)
T 2ea7_A 102 RDSYILEQGHAQKIPAGTTFFLVNPD 127 (434)
T ss_dssp EEEEEEETTEEEEECTTCEEEEEECC
T ss_pred CEEEEeCCCCEEEECCCccEEEEeCC
Confidence 45778889999999999999999985
No 112
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=33.02 E-value=12 Score=40.44 Aligned_cols=55 Identities=20% Similarity=0.166 Sum_probs=38.5
Q ss_pred eEEEeecCCeEEecCCCcccccccc-hhhhhh-------------hcc--------------cCccchHHHHHHH-HHhh
Q 006745 538 WTFIQKLGEAVFVPAGCPHQVRNLK-SCIKAA-------------LDF--------------VSPENVSQCVRLT-EEFR 588 (632)
Q Consensus 538 Wtf~Q~lGEAVFIPAGCPHQVRNLk-SCIKVA-------------lDF--------------VSPEnV~ec~rLt-eEfR 588 (632)
.++.=+.||.++||+|.+|.+.|.- ++-=++ .+| .++|=+.+.+.+- ++++
T Consensus 128 ~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~~~~~~vLa~af~v~~~~v~ 207 (445)
T 2cav_A 128 DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSAFSKNFLEASYDSPYDEIE 207 (445)
T ss_dssp EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGGSCHHHHHHHHTSCHHHHH
T ss_pred EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhhcCCHHHHHHHhCCCHHHHH
Confidence 4777889999999999999999995 432111 133 2355567777663 5668
Q ss_pred cCCC
Q 006745 589 LLPP 592 (632)
Q Consensus 589 ~Lp~ 592 (632)
.|+.
T Consensus 208 ~l~~ 211 (445)
T 2cav_A 208 QTLL 211 (445)
T ss_dssp HHTT
T ss_pred hhhc
Confidence 8874
No 113
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=32.20 E-value=13 Score=33.75 Aligned_cols=55 Identities=9% Similarity=-0.008 Sum_probs=33.5
Q ss_pred CcccCCccccccccCHHHHHHHHHHhCCcceEEEeecCCeEEecCCCccc-ccccchhhh
Q 006745 508 QQVIHPIHDQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQ-VRNLKSCIK 566 (632)
Q Consensus 508 ~~v~dPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQ-VRNLkSCIK 566 (632)
....|| +.+.+|+=.-. +..+-|-++=.+.=..||.+++|+|.+|+ +.+...|+=
T Consensus 58 p~H~H~-~~ee~~VL~G~---~~~~~g~~~~~~~~~~Gd~~~~p~g~~H~p~~~~e~~~~ 113 (145)
T 2o1q_A 58 AAHVHV-GPGEYFLTKGK---MDVRGGKAAGGDTAIAPGYGYESANARHDKTEFPVASEF 113 (145)
T ss_dssp CCEEES-SCEEEEEEEEE---EEETTCGGGTSEEEESSEEEEECTTCEESCCEEEEEEEE
T ss_pred CccCCC-CCEEEEEEEeE---EEEcCCCEecceEeCCCEEEEECcCCccCCeECCCCeEE
Confidence 345666 56655553322 11122333301333789999999999999 888888854
No 114
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=31.86 E-value=12 Score=41.39 Aligned_cols=102 Identities=7% Similarity=-0.027 Sum_probs=55.0
Q ss_pred CCCcceeeeecCCChHHHHHHHHHHHHhhcccccCCCCcccCCccccccccCHHHHH-HHHHHhCCcceEEEeecCCeEE
Q 006745 471 ADGGAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKA-KLKQEYGIEPWTFIQKLGEAVF 549 (632)
Q Consensus 471 ~~~GAlWDIFrreDv~KLreyL~kh~~Efrh~~~~pv~~v~dPIHDQ~fYLt~ehk~-kLkEEyGVEpWtf~Q~lGEAVF 549 (632)
..+|.+.-+... +.|-|... .--...+.-.-+.-+....||-.++.+|+..-.-+ .+-.+-|-+-.+..=..||.++
T Consensus 351 ~~gG~v~~~~~~-~fP~L~~l-~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~v 428 (510)
T 3c3v_A 351 PQAGSLKTANEL-NLLILRWL-GLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLV 428 (510)
T ss_dssp TTTEEEEEECTT-TSTTHHHH-TCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCeEEEEeccc-cCcccccc-eEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEE
Confidence 467888777764 57766421 10001111111222345678877888777554211 1111122222333467899999
Q ss_pred ecCCCcccccccchhhhhhhcccCc
Q 006745 550 VPAGCPHQVRNLKSCIKAALDFVSP 574 (632)
Q Consensus 550 IPAGCPHQVRNLkSCIKVAlDFVSP 574 (632)
||+|.||-+.|...-..+..=|+|+
T Consensus 429 iP~G~~H~~~Ng~e~l~~l~f~~s~ 453 (510)
T 3c3v_A 429 VPQNFAVAGKSQSDNFEYVAFKTDS 453 (510)
T ss_dssp ECTTCEEEEEECSSEEEEEEEESSS
T ss_pred ECCCCeEEEEeCCCCEEEEEEECCC
Confidence 9999999999954444443333344
No 115
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=30.85 E-value=20 Score=38.13 Aligned_cols=31 Identities=16% Similarity=0.142 Sum_probs=26.0
Q ss_pred CcceEEEeecCCeEEecCCCcccccccchhh
Q 006745 535 IEPWTFIQKLGEAVFVPAGCPHQVRNLKSCI 565 (632)
Q Consensus 535 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCI 565 (632)
|.+=+|.=..||++.||+|++||..|...|+
T Consensus 314 I~~~~~~w~~gD~fvvP~w~~h~~~n~~~a~ 344 (368)
T 3nw4_A 314 MNGETTKLEKGDMFVVPSWVPWSLQAETQFD 344 (368)
T ss_dssp ETTEEEEECTTCEEEECTTCCEEEEESSSEE
T ss_pred ECCEEEEecCCCEEEECCCCcEEEEeCCCEE
Confidence 4556788899999999999999999975543
No 116
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=26.17 E-value=13 Score=40.89 Aligned_cols=118 Identities=11% Similarity=0.122 Sum_probs=62.4
Q ss_pred CCCcceeeeecCCChHHHHHHHHHHHHhhcccccCCCCcccCCccccccccCHHHHH-HHHHHhCCcceEEEeecCCeEE
Q 006745 471 ADGGAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVIHPIHDQVFYLSSEHKA-KLKQEYGIEPWTFIQKLGEAVF 549 (632)
Q Consensus 471 ~~~GAlWDIFrreDv~KLreyL~kh~~Efrh~~~~pv~~v~dPIHDQ~fYLt~ehk~-kLkEEyGVEpWtf~Q~lGEAVF 549 (632)
..+|.+.-+.. .+.|-|... .--...+.-.-+.-.....||=.++.+|+..-.-+ .+-.+.|-+-.+..=..||.++
T Consensus 346 ~~gG~v~~~~~-~~~P~L~~l-gls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~v 423 (493)
T 2d5f_A 346 PKAGRISTLNS-LTLPALRQF-GLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLV 423 (493)
T ss_dssp TTTEEEEEEST-TTSTTHHHH-TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCeEEEEecc-ccCcccccc-ceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEE
Confidence 46788877765 467776431 10011111111222345678877887877554311 1111122222333468899999
Q ss_pred ecCCCcccccccchhhhhhhcccCccchHHHHHHHHHhhcCCC
Q 006745 550 VPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPP 592 (632)
Q Consensus 550 IPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteEfR~Lp~ 592 (632)
||+|.+|...|...-..+..=|.|+..-..- |+.=|+.+|.
T Consensus 424 vP~G~~H~~~n~~e~~~~l~~~ts~~p~~~~--l~s~~~~~p~ 464 (493)
T 2d5f_A 424 VPQNFVVAEQGGEQGLEYVVFKTHHNAVSSY--IKDVFRAIPS 464 (493)
T ss_dssp ECTTCEEEEEEEEEEEEEEEEESSTTCCEEE--HHHHHHHSCH
T ss_pred ECCCCeEeeeeCCCCEEEEEEECCCCCccee--HHHHHHhCCH
Confidence 9999999999975444433322232221111 2666777774
No 117
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=24.32 E-value=25 Score=38.56 Aligned_cols=20 Identities=15% Similarity=0.230 Sum_probs=18.0
Q ss_pred ecCCeEEecCCCcccccccc
Q 006745 543 KLGEAVFVPAGCPHQVRNLK 562 (632)
Q Consensus 543 ~lGEAVFIPAGCPHQVRNLk 562 (632)
+.||+|.||||.||=.-|.-
T Consensus 150 ~~GDvi~iPaG~~~~~~N~g 169 (466)
T 3kgl_A 150 RTGDTIATHPGVAQWFYNDG 169 (466)
T ss_dssp ETTEEEEECTTCEEEEECCS
T ss_pred cCCCEEEECCCCcEEEEeCC
Confidence 56999999999999998875
No 118
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=21.33 E-value=25 Score=38.52 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=24.5
Q ss_pred ecCCeEEecCCCcccccccchhhhhhhcccCccc
Q 006745 543 KLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPEN 576 (632)
Q Consensus 543 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 576 (632)
+.||+|.||||.+|=.-|--+-==|++-++.+-|
T Consensus 135 ~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n 168 (465)
T 3qac_A 135 REGDIFAMPAGVSHWAYNNGDQPLVAVILIDTAN 168 (465)
T ss_dssp ETTEEEEECTTCEEEEECCSSSCEEEEEEECTTS
T ss_pred cCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCC
Confidence 6799999999999999997654334444444443
No 119
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=20.84 E-value=29 Score=38.35 Aligned_cols=21 Identities=24% Similarity=0.371 Sum_probs=18.4
Q ss_pred ecCCeEEecCCCcccccccch
Q 006745 543 KLGEAVFVPAGCPHQVRNLKS 563 (632)
Q Consensus 543 ~lGEAVFIPAGCPHQVRNLkS 563 (632)
+.||++.||||.+|-.-|--+
T Consensus 115 ~~GDV~viPaG~~h~~~N~G~ 135 (496)
T 3ksc_A 115 REGDIIAVPTGIVFWMYNDQD 135 (496)
T ss_dssp CTTEEEEECTTCEEEEEECSS
T ss_pred CCCCEEEECCCCcEEEEcCCC
Confidence 579999999999999888653
Done!